Query 006778
Match_columns 631
No_of_seqs 599 out of 4121
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 08:43:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006778.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006778hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gmh_A Electron transfer flavo 100.0 3.9E-92 1.3E-96 793.6 47.7 529 101-631 29-584 (584)
2 3oz2_A Digeranylgeranylglycero 100.0 1.3E-34 4.5E-39 309.3 31.6 339 107-485 4-350 (397)
3 3cgv_A Geranylgeranyl reductas 100.0 1.1E-30 3.7E-35 279.9 31.2 339 107-485 4-350 (397)
4 3atr_A Conserved archaeal prot 100.0 2.4E-30 8.2E-35 282.8 26.9 342 106-486 5-356 (453)
5 3rp8_A Flavoprotein monooxygen 100.0 1.2E-29 4E-34 273.4 26.8 333 105-487 21-372 (407)
6 3nix_A Flavoprotein/dehydrogen 100.0 1.4E-28 4.9E-33 265.7 27.2 328 106-469 4-344 (421)
7 3e1t_A Halogenase; flavoprotei 100.0 1.8E-28 6E-33 272.1 28.1 328 106-469 6-354 (512)
8 2qa2_A CABE, polyketide oxygen 100.0 1.3E-26 4.4E-31 255.9 34.7 335 105-486 10-351 (499)
9 2qa1_A PGAE, polyketide oxygen 100.0 9.8E-27 3.4E-31 256.9 33.8 336 104-486 8-350 (500)
10 3alj_A 2-methyl-3-hydroxypyrid 100.0 1.4E-27 4.6E-32 254.8 24.1 323 107-478 11-343 (379)
11 3fmw_A Oxygenase; mithramycin, 100.0 1E-26 3.5E-31 260.2 30.0 333 105-487 47-396 (570)
12 1k0i_A P-hydroxybenzoate hydro 100.0 2.3E-27 8E-32 254.1 23.4 339 106-485 1-350 (394)
13 1pn0_A Phenol 2-monooxygenase; 100.0 2.2E-26 7.4E-31 262.1 30.0 353 106-486 7-424 (665)
14 3c96_A Flavin-containing monoo 100.0 3.6E-26 1.2E-30 246.4 29.9 335 106-479 3-366 (410)
15 3ihg_A RDME; flavoenzyme, anth 100.0 2.9E-26 9.8E-31 255.8 29.9 331 106-480 4-368 (535)
16 2x3n_A Probable FAD-dependent 100.0 3.4E-27 1.2E-31 253.3 21.5 332 107-486 6-360 (399)
17 3i3l_A Alkylhalidase CMLS; fla 99.9 7.7E-27 2.6E-31 261.8 23.6 325 105-469 21-366 (591)
18 4hb9_A Similarities with proba 99.9 1.5E-26 5E-31 248.4 24.1 335 108-480 2-379 (412)
19 2dkh_A 3-hydroxybenzoate hydro 99.9 1E-25 3.4E-30 256.1 30.9 346 106-486 31-415 (639)
20 2vou_A 2,6-dihydroxypyridine h 99.9 5.5E-26 1.9E-30 243.9 25.4 326 106-485 4-368 (397)
21 2xdo_A TETX2 protein; tetracyc 99.9 2.8E-25 9.4E-30 238.5 23.5 316 106-479 25-379 (398)
22 2r0c_A REBC; flavin adenine di 99.9 6.5E-24 2.2E-28 237.2 26.9 332 106-485 25-381 (549)
23 3c4a_A Probable tryptophan hyd 99.9 1.4E-24 4.8E-29 231.7 17.8 318 108-485 1-331 (381)
24 2weu_A Tryptophan 5-halogenase 99.9 1.9E-23 6.6E-28 231.6 26.2 225 205-469 166-392 (511)
25 2aqj_A Tryptophan halogenase, 99.9 6.8E-23 2.3E-27 228.6 25.3 223 205-469 158-384 (538)
26 2pyx_A Tryptophan halogenase; 99.9 1.2E-22 4E-27 226.0 22.1 227 206-469 169-400 (526)
27 2e4g_A Tryptophan halogenase; 99.9 1.7E-22 5.9E-27 225.8 22.7 225 206-469 188-415 (550)
28 3ihm_A Styrene monooxygenase A 99.8 7.3E-20 2.5E-24 198.3 21.7 309 106-468 21-361 (430)
29 2bry_A NEDD9 interacting prote 99.7 4.9E-16 1.7E-20 171.2 21.0 144 105-289 90-234 (497)
30 1ryi_A Glycine oxidase; flavop 99.7 1.8E-15 6.3E-20 160.6 20.1 290 105-452 15-362 (382)
31 1yvv_A Amine oxidase, flavin-c 99.6 1.6E-14 5.6E-19 150.4 23.2 148 107-288 2-165 (336)
32 1y56_B Sarcosine oxidase; dehy 99.6 3.5E-14 1.2E-18 150.7 23.9 293 106-452 4-355 (382)
33 2gag_B Heterotetrameric sarcos 99.6 7E-14 2.4E-18 149.4 25.3 197 207-452 169-375 (405)
34 3dme_A Conserved exported prot 99.6 3.3E-14 1.1E-18 149.6 20.1 170 106-298 3-220 (369)
35 3nyc_A D-arginine dehydrogenas 99.6 8.7E-14 3E-18 147.3 22.4 292 106-451 8-357 (381)
36 3pvc_A TRNA 5-methylaminomethy 99.5 6.3E-14 2.1E-18 160.6 18.2 158 106-286 263-470 (689)
37 3ps9_A TRNA 5-methylaminomethy 99.5 5.2E-14 1.8E-18 161.0 17.5 157 107-286 272-474 (676)
38 2gf3_A MSOX, monomeric sarcosi 99.5 1.8E-13 6.2E-18 145.4 18.2 200 206-452 144-364 (389)
39 2qcu_A Aerobic glycerol-3-phos 99.5 5.5E-12 1.9E-16 139.0 26.7 216 207-453 144-373 (501)
40 3da1_A Glycerol-3-phosphate de 99.5 4.9E-12 1.7E-16 141.2 25.9 217 208-453 166-392 (561)
41 2oln_A NIKD protein; flavoprot 99.5 3.7E-12 1.3E-16 135.9 22.5 72 206-298 147-218 (397)
42 3axb_A Putative oxidoreductase 99.5 2.6E-12 8.8E-17 139.5 21.2 74 206-298 175-264 (448)
43 4dgk_A Phytoene dehydrogenase; 99.4 1.4E-11 4.7E-16 135.7 25.3 62 212-289 221-282 (501)
44 3jsk_A Cypbp37 protein; octame 99.4 1.1E-12 3.7E-17 135.8 15.1 158 106-295 78-261 (344)
45 1qo8_A Flavocytochrome C3 fuma 99.4 1.2E-12 4.2E-17 146.5 16.1 198 104-320 118-349 (566)
46 4at0_A 3-ketosteroid-delta4-5a 99.4 3.3E-12 1.1E-16 141.1 18.8 96 213-321 203-302 (510)
47 1y0p_A Fumarate reductase flav 99.4 2.4E-12 8.1E-17 144.3 17.5 197 105-320 124-354 (571)
48 3dje_A Fructosyl amine: oxygen 99.4 3.2E-12 1.1E-16 138.3 17.2 64 207-286 156-222 (438)
49 3kkj_A Amine oxidase, flavin-c 99.4 1.5E-12 5.1E-17 129.4 13.0 41 106-152 1-41 (336)
50 2i0z_A NAD(FAD)-utilizing dehy 99.4 2.3E-12 7.9E-17 140.0 15.2 169 105-299 24-212 (447)
51 3v76_A Flavoprotein; structura 99.4 3.2E-12 1.1E-16 137.3 15.2 157 105-298 25-207 (417)
52 3c4n_A Uncharacterized protein 99.4 2.3E-11 7.7E-16 130.4 21.1 167 106-298 35-247 (405)
53 3nlc_A Uncharacterized protein 99.4 5.2E-12 1.8E-16 139.6 16.0 160 105-298 105-290 (549)
54 1rp0_A ARA6, thiazole biosynth 99.4 3.5E-12 1.2E-16 130.0 13.2 146 106-291 38-197 (284)
55 2cul_A Glucose-inhibited divis 99.4 4E-12 1.4E-16 125.5 12.6 126 106-288 2-128 (232)
56 2gqf_A Hypothetical protein HI 99.3 1.9E-11 6.6E-16 130.7 17.2 157 106-299 3-189 (401)
57 1d4d_A Flavocytochrome C fumar 99.3 1E-11 3.6E-16 138.9 15.2 197 106-321 125-355 (572)
58 2gjc_A Thiazole biosynthetic e 99.3 1.4E-11 4.7E-16 126.8 14.4 163 105-294 63-248 (326)
59 4a9w_A Monooxygenase; baeyer-v 99.3 9.7E-12 3.3E-16 129.9 13.6 130 107-285 3-132 (357)
60 3ces_A MNMG, tRNA uridine 5-ca 99.3 9.3E-12 3.2E-16 138.8 13.6 149 106-286 27-182 (651)
61 3ka7_A Oxidoreductase; structu 99.3 1E-09 3.5E-14 117.9 28.4 58 212-286 196-253 (425)
62 2zxi_A TRNA uridine 5-carboxym 99.3 1.7E-11 5.9E-16 136.1 14.6 149 106-285 26-180 (637)
63 3i6d_A Protoporphyrinogen oxid 99.3 1.2E-10 4.1E-15 126.8 20.8 48 106-153 4-51 (470)
64 3cp8_A TRNA uridine 5-carboxym 99.3 2.3E-11 7.7E-16 135.6 14.4 151 104-285 18-174 (641)
65 2uzz_A N-methyl-L-tryptophan o 99.3 1.7E-11 6E-16 129.3 12.9 62 206-285 143-204 (372)
66 2wdq_A Succinate dehydrogenase 99.3 4.8E-11 1.6E-15 133.8 16.4 90 212-321 143-232 (588)
67 3nrn_A Uncharacterized protein 99.3 4.9E-10 1.7E-14 120.4 23.5 55 212-285 189-243 (421)
68 2h88_A Succinate dehydrogenase 99.2 8E-11 2.7E-15 132.3 17.0 90 211-321 154-243 (621)
69 1c0p_A D-amino acid oxidase; a 99.2 1.5E-10 5.1E-15 121.9 17.4 37 105-147 4-40 (363)
70 3gwf_A Cyclohexanone monooxyge 99.2 4.9E-11 1.7E-15 132.4 14.0 134 106-285 7-147 (540)
71 2rgh_A Alpha-glycerophosphate 99.2 1.1E-09 3.6E-14 122.5 24.7 76 208-297 184-259 (571)
72 3ab1_A Ferredoxin--NADP reduct 99.2 4.2E-11 1.4E-15 126.0 12.6 121 105-286 12-132 (360)
73 1pj5_A N,N-dimethylglycine oxi 99.2 6.8E-11 2.3E-15 138.2 15.4 73 206-298 145-217 (830)
74 2ywl_A Thioredoxin reductase r 99.2 1.4E-10 4.7E-15 109.4 13.7 113 108-289 2-114 (180)
75 3k7m_X 6-hydroxy-L-nicotine ox 99.2 1.5E-09 5.1E-14 116.9 23.6 40 108-153 2-41 (431)
76 4fk1_A Putative thioredoxin re 99.2 6.1E-11 2.1E-15 121.8 11.9 115 105-286 4-118 (304)
77 3gyx_A Adenylylsulfate reducta 99.2 1.2E-10 4.2E-15 131.7 15.4 172 105-287 20-235 (662)
78 3uox_A Otemo; baeyer-villiger 99.2 5.5E-11 1.9E-15 132.1 11.8 136 106-285 8-147 (545)
79 4ap3_A Steroid monooxygenase; 99.2 1.1E-10 3.8E-15 129.8 14.1 137 106-285 20-159 (549)
80 1w4x_A Phenylacetone monooxyge 99.2 1.5E-10 5.1E-15 128.8 15.1 138 106-286 15-155 (542)
81 3nks_A Protoporphyrinogen oxid 99.2 1.5E-10 5.1E-15 126.5 14.8 55 213-284 235-289 (477)
82 2zbw_A Thioredoxin reductase; 99.2 8.8E-11 3E-15 122.0 12.3 119 106-286 4-122 (335)
83 3lzw_A Ferredoxin--NADP reduct 99.2 9E-11 3.1E-15 121.4 11.4 118 106-285 6-123 (332)
84 4a5l_A Thioredoxin reductase; 99.2 4.8E-11 1.6E-15 122.7 9.1 118 107-285 4-121 (314)
85 2bs2_A Quinol-fumarate reducta 99.2 5.1E-11 1.8E-15 134.8 9.9 88 212-320 158-245 (660)
86 2xve_A Flavin-containing monoo 99.2 2.1E-10 7.3E-15 125.0 14.3 156 107-286 2-167 (464)
87 2ivd_A PPO, PPOX, protoporphyr 99.1 1.2E-09 3.9E-14 119.5 19.9 42 106-153 15-56 (478)
88 3f8d_A Thioredoxin reductase ( 99.1 2.6E-10 8.8E-15 117.3 13.8 114 105-286 13-126 (323)
89 1jnr_A Adenylylsulfate reducta 99.1 2.4E-10 8.2E-15 129.5 14.4 165 105-286 20-219 (643)
90 1kf6_A Fumarate reductase flav 99.1 4.7E-10 1.6E-14 126.0 16.1 67 211-288 133-200 (602)
91 3g3e_A D-amino-acid oxidase; F 99.1 5.4E-10 1.8E-14 117.0 14.7 149 108-286 1-187 (351)
92 1s3e_A Amine oxidase [flavin-c 99.1 6.7E-09 2.3E-13 114.8 24.0 41 106-152 3-43 (520)
93 4gcm_A TRXR, thioredoxin reduc 99.1 2.8E-10 9.5E-15 117.1 11.8 112 106-285 5-116 (312)
94 2e5v_A L-aspartate oxidase; ar 99.1 6.3E-10 2.1E-14 121.5 15.1 62 211-288 118-179 (472)
95 1chu_A Protein (L-aspartate ox 99.1 2.4E-10 8.2E-15 126.8 11.7 90 212-321 138-234 (540)
96 2gv8_A Monooxygenase; FMO, FAD 99.1 4.8E-10 1.7E-14 121.6 13.8 162 106-286 5-178 (447)
97 3d1c_A Flavin-containing putat 99.1 1.9E-10 6.5E-15 121.0 9.7 138 107-285 4-143 (369)
98 3fbs_A Oxidoreductase; structu 99.1 3.3E-10 1.1E-14 115.1 11.0 111 107-286 2-113 (297)
99 2q7v_A Thioredoxin reductase; 99.1 5E-10 1.7E-14 115.8 11.8 116 106-286 7-124 (325)
100 2vvm_A Monoamine oxidase N; FA 99.1 3.4E-09 1.2E-13 116.3 19.1 57 212-285 255-312 (495)
101 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 8.9E-10 3E-14 115.0 13.7 138 108-283 2-163 (342)
102 3itj_A Thioredoxin reductase 1 99.0 4E-10 1.4E-14 116.8 9.9 120 105-286 20-143 (338)
103 3cty_A Thioredoxin reductase; 99.0 6.3E-10 2.1E-14 114.8 11.3 115 104-286 13-127 (319)
104 1fl2_A Alkyl hydroperoxide red 99.0 5.3E-10 1.8E-14 114.7 10.5 115 107-286 1-116 (310)
105 2q0l_A TRXR, thioredoxin reduc 99.0 5.6E-10 1.9E-14 114.6 10.7 113 108-286 2-115 (311)
106 1vdc_A NTR, NADPH dependent th 99.0 5.2E-10 1.8E-14 116.0 10.4 115 106-286 7-125 (333)
107 1mo9_A ORF3; nucleotide bindin 99.0 4.8E-09 1.6E-13 116.1 18.5 71 212-298 255-328 (523)
108 4b1b_A TRXR, thioredoxin reduc 99.0 8.8E-11 3E-15 129.9 3.7 147 106-286 41-198 (542)
109 1v59_A Dihydrolipoamide dehydr 99.0 4.9E-10 1.7E-14 122.6 9.4 137 106-285 4-157 (478)
110 3s5w_A L-ornithine 5-monooxyge 99.0 4.6E-10 1.6E-14 122.2 8.6 151 106-285 29-192 (463)
111 3urh_A Dihydrolipoyl dehydroge 99.0 2.6E-10 8.9E-15 125.3 6.6 56 104-165 22-77 (491)
112 3fpz_A Thiazole biosynthetic e 99.0 1.2E-09 4.2E-14 113.2 11.4 53 105-161 63-115 (326)
113 3l8k_A Dihydrolipoyl dehydroge 99.0 2.1E-10 7.3E-15 125.1 5.6 135 106-285 3-144 (466)
114 2a87_A TRXR, TR, thioredoxin r 99.0 1.5E-09 5.1E-14 112.8 11.2 115 105-286 12-127 (335)
115 2a8x_A Dihydrolipoyl dehydroge 99.0 2.4E-10 8.1E-15 124.7 4.8 143 107-286 3-147 (464)
116 1ojt_A Surface protein; redox- 99.0 6.7E-10 2.3E-14 121.7 7.8 53 105-163 4-56 (482)
117 1dxl_A Dihydrolipoamide dehydr 98.9 2.2E-09 7.7E-14 117.1 11.2 144 106-286 5-152 (470)
118 1hyu_A AHPF, alkyl hydroperoxi 98.9 2E-09 6.7E-14 119.1 10.7 116 105-285 210-326 (521)
119 3lov_A Protoporphyrinogen oxid 98.9 1E-07 3.6E-12 103.8 24.3 40 107-152 4-45 (475)
120 1trb_A Thioredoxin reductase; 98.9 1.5E-09 5.3E-14 111.7 8.9 114 106-286 4-117 (320)
121 2bcg_G Secretory pathway GDP d 98.9 1.5E-08 5.2E-13 110.0 17.1 58 212-285 242-300 (453)
122 1ebd_A E3BD, dihydrolipoamide 98.9 1.6E-09 5.5E-14 117.8 9.2 138 107-286 3-146 (455)
123 1zmd_A Dihydrolipoyl dehydroge 98.9 3.5E-09 1.2E-13 115.7 10.7 53 106-164 5-57 (474)
124 3dgz_A Thioredoxin reductase 2 98.9 2.9E-09 9.8E-14 116.9 9.4 52 106-163 5-64 (488)
125 2qae_A Lipoamide, dihydrolipoy 98.9 3.8E-09 1.3E-13 115.2 10.4 139 107-286 2-149 (468)
126 3lad_A Dihydrolipoamide dehydr 98.9 1E-09 3.5E-14 120.0 5.4 52 106-163 2-59 (476)
127 4gde_A UDP-galactopyranose mut 98.9 1E-08 3.6E-13 112.7 13.4 47 102-153 5-51 (513)
128 3r9u_A Thioredoxin reductase; 98.9 1E-08 3.5E-13 104.9 12.3 113 107-285 4-118 (315)
129 3qfa_A Thioredoxin reductase 1 98.9 3E-09 1E-13 117.6 8.8 52 106-163 31-90 (519)
130 1xdi_A RV3303C-LPDA; reductase 98.9 6.6E-09 2.3E-13 114.3 11.2 140 107-286 2-157 (499)
131 2hqm_A GR, grase, glutathione 98.9 3.6E-09 1.2E-13 115.7 9.1 51 106-163 10-60 (479)
132 1zk7_A HGII, reductase, mercur 98.8 3.6E-09 1.2E-13 115.4 8.6 52 106-164 3-54 (467)
133 3p1w_A Rabgdi protein; GDI RAB 98.8 2E-08 6.9E-13 108.7 14.1 58 212-284 256-313 (475)
134 4b63_A L-ornithine N5 monooxyg 98.8 4.5E-09 1.5E-13 115.6 9.1 157 106-284 38-213 (501)
135 2yqu_A 2-oxoglutarate dehydrog 98.8 5E-09 1.7E-13 113.8 9.4 138 107-286 1-142 (455)
136 4dna_A Probable glutathione re 98.8 9E-10 3.1E-14 120.0 2.8 142 106-286 4-146 (463)
137 3dk9_A Grase, GR, glutathione 98.8 1.9E-09 6.6E-14 117.9 5.2 53 106-165 19-71 (478)
138 3o0h_A Glutathione reductase; 98.8 9.4E-09 3.2E-13 112.6 10.5 137 107-286 26-167 (484)
139 3ic9_A Dihydrolipoamide dehydr 98.8 1.2E-08 4E-13 112.1 10.7 53 107-166 8-60 (492)
140 2r9z_A Glutathione amide reduc 98.8 2.3E-09 7.7E-14 116.9 4.1 51 106-163 3-53 (463)
141 1lvl_A Dihydrolipoamide dehydr 98.8 2.8E-08 9.7E-13 108.0 12.4 51 106-163 4-54 (458)
142 3dgh_A TRXR-1, thioredoxin red 98.8 9.6E-09 3.3E-13 112.5 8.7 52 106-163 8-68 (483)
143 2eq6_A Pyruvate dehydrogenase 98.8 1.8E-08 6E-13 109.8 10.7 50 107-163 6-55 (464)
144 1ges_A Glutathione reductase; 98.8 1.4E-08 4.7E-13 110.3 9.3 51 106-163 3-53 (450)
145 1q1r_A Putidaredoxin reductase 98.7 7.8E-09 2.7E-13 111.5 7.2 111 106-286 3-115 (431)
146 3qvp_A Glucose oxidase; oxidor 98.7 3.3E-08 1.1E-12 110.1 11.5 72 214-298 229-304 (583)
147 1onf_A GR, grase, glutathione 98.7 1.6E-08 5.6E-13 111.1 8.9 51 106-163 1-51 (500)
148 3fg2_P Putative rubredoxin red 98.7 3.7E-08 1.3E-12 105.2 11.3 111 107-298 142-252 (404)
149 3oc4_A Oxidoreductase, pyridin 98.7 2.8E-08 9.4E-13 107.9 10.0 114 108-286 3-116 (452)
150 1fec_A Trypanothione reductase 98.7 3.8E-08 1.3E-12 107.9 11.1 52 107-164 3-63 (490)
151 3lxd_A FAD-dependent pyridine 98.7 5.5E-08 1.9E-12 104.3 11.7 111 107-298 152-262 (415)
152 2wpf_A Trypanothione reductase 98.7 5E-08 1.7E-12 107.1 11.4 54 105-164 5-67 (495)
153 3q9t_A Choline dehydrogenase a 98.7 2.6E-08 8.8E-13 111.0 9.1 52 224-286 218-271 (577)
154 3klj_A NAD(FAD)-dependent dehy 98.6 3.9E-08 1.3E-12 104.3 8.6 108 107-285 9-116 (385)
155 3kd9_A Coenzyme A disulfide re 98.6 4.7E-08 1.6E-12 105.9 9.4 39 107-149 3-41 (449)
156 3lxd_A FAD-dependent pyridine 98.6 2.7E-08 9.1E-13 106.7 6.6 110 106-285 8-119 (415)
157 1d5t_A Guanine nucleotide diss 98.6 4.2E-07 1.4E-11 98.0 15.9 58 212-286 234-291 (433)
158 1rsg_A FMS1 protein; FAD bindi 98.6 2.8E-07 9.6E-12 101.7 14.9 41 106-152 7-48 (516)
159 2bc0_A NADH oxidase; flavoprot 98.6 4.5E-08 1.5E-12 107.4 8.1 114 106-286 34-150 (490)
160 3ics_A Coenzyme A-disulfide re 98.6 6.9E-08 2.4E-12 108.4 9.7 118 106-285 35-152 (588)
161 2yg5_A Putrescine oxidase; oxi 98.6 2.4E-07 8.3E-12 100.2 13.6 41 106-152 4-44 (453)
162 3pl8_A Pyranose 2-oxidase; sub 98.6 2.5E-07 8.6E-12 104.2 13.4 41 104-150 43-83 (623)
163 3ef6_A Toluene 1,2-dioxygenase 98.6 9.9E-08 3.4E-12 102.1 9.7 110 107-298 143-252 (410)
164 3sx6_A Sulfide-quinone reducta 98.6 6.3E-08 2.2E-12 104.6 7.7 106 108-286 5-113 (437)
165 2gqw_A Ferredoxin reductase; f 98.6 8.4E-08 2.9E-12 102.6 8.2 107 106-286 6-114 (408)
166 3iwa_A FAD-dependent pyridine 98.6 1.1E-07 3.7E-12 103.8 9.0 39 107-149 3-41 (472)
167 3h28_A Sulfide-quinone reducta 98.5 4.2E-08 1.4E-12 105.7 5.4 109 107-286 2-110 (430)
168 1xhc_A NADH oxidase /nitrite r 98.5 6.7E-08 2.3E-12 101.9 6.8 34 108-148 9-42 (367)
169 3hyw_A Sulfide-quinone reducta 98.5 5.7E-08 2E-12 104.7 5.5 107 108-285 3-109 (430)
170 3ef6_A Toluene 1,2-dioxygenase 98.5 5.9E-08 2E-12 103.9 5.5 107 108-285 3-111 (410)
171 2v3a_A Rubredoxin reductase; a 98.5 5.3E-07 1.8E-11 95.5 12.7 110 107-298 145-254 (384)
172 2v3a_A Rubredoxin reductase; a 98.5 1.6E-07 5.4E-12 99.5 8.4 109 106-286 3-114 (384)
173 3k30_A Histamine dehydrogenase 98.5 4E-07 1.4E-11 104.0 12.3 44 105-154 389-432 (690)
174 3h8l_A NADH oxidase; membrane 98.5 6.1E-08 2.1E-12 103.6 5.1 110 108-286 2-114 (409)
175 2gag_A Heterotetrameric sarcos 98.5 2.9E-07 1E-11 108.8 11.1 123 106-285 127-253 (965)
176 2x8g_A Thioredoxin glutathione 98.5 2.2E-07 7.5E-12 104.5 9.5 53 105-163 105-165 (598)
177 2cdu_A NADPH oxidase; flavoenz 98.5 2.2E-07 7.6E-12 100.7 8.8 118 108-286 1-118 (452)
178 3cgb_A Pyridine nucleotide-dis 98.5 2.8E-07 9.7E-12 100.7 9.6 38 108-149 37-74 (480)
179 1q1r_A Putidaredoxin reductase 98.5 8.3E-07 2.8E-11 95.6 13.0 112 107-298 149-261 (431)
180 3ntd_A FAD-dependent pyridine 98.5 2.4E-07 8.1E-12 103.4 8.9 116 108-285 2-117 (565)
181 1nhp_A NADH peroxidase; oxidor 98.5 1.7E-07 5.9E-12 101.4 7.2 38 108-149 1-38 (447)
182 2vdc_G Glutamate synthase [NAD 98.4 1.5E-07 5E-12 102.1 6.3 39 106-150 121-159 (456)
183 4gut_A Lysine-specific histone 98.4 1.3E-06 4.5E-11 100.4 14.3 39 107-151 336-374 (776)
184 3fim_B ARYL-alcohol oxidase; A 98.4 1.8E-07 6.1E-12 104.0 6.7 71 214-297 210-286 (566)
185 1ges_A Glutathione reductase; 98.4 9E-07 3.1E-11 95.9 11.9 101 107-287 167-267 (450)
186 2yqu_A 2-oxoglutarate dehydrog 98.4 8.1E-07 2.8E-11 96.3 11.1 100 107-287 167-266 (455)
187 3fg2_P Putative rubredoxin red 98.4 2.4E-07 8.4E-12 98.8 6.8 107 108-285 2-110 (404)
188 1y56_A Hypothetical protein PH 98.4 3E-07 1E-11 100.8 7.5 114 105-285 106-219 (493)
189 2hqm_A GR, grase, glutathione 98.4 1.2E-06 4.1E-11 95.6 11.9 101 107-286 185-286 (479)
190 3oc4_A Oxidoreductase, pyridin 98.4 2.3E-06 7.8E-11 92.7 13.7 100 107-287 147-246 (452)
191 1m6i_A Programmed cell death p 98.4 2.4E-07 8.1E-12 101.7 5.8 41 105-149 9-49 (493)
192 2cdu_A NADPH oxidase; flavoenz 98.3 1.5E-06 5E-11 94.2 11.1 101 107-287 149-249 (452)
193 1nhp_A NADH peroxidase; oxidor 98.3 1.4E-06 5E-11 94.1 10.7 99 107-286 149-247 (447)
194 1v59_A Dihydrolipoamide dehydr 98.3 2.1E-06 7.1E-11 93.7 11.9 107 107-287 183-289 (478)
195 2r9z_A Glutathione amide reduc 98.3 2.1E-06 7.2E-11 93.3 11.6 99 108-287 167-266 (463)
196 2gqw_A Ferredoxin reductase; f 98.3 3.4E-06 1.2E-10 90.1 13.0 106 107-298 145-250 (408)
197 1onf_A GR, grase, glutathione 98.3 3.7E-06 1.3E-10 92.3 13.5 100 107-286 176-276 (500)
198 2jbv_A Choline oxidase; alcoho 98.3 1.1E-06 3.9E-11 97.4 8.8 63 223-297 220-283 (546)
199 4eqs_A Coenzyme A disulfide re 98.3 9.6E-07 3.3E-11 95.3 7.6 115 109-285 2-116 (437)
200 3vrd_B FCCB subunit, flavocyto 98.2 3E-06 1E-10 90.1 10.7 35 109-147 4-38 (401)
201 1cjc_A Protein (adrenodoxin re 98.2 4.7E-07 1.6E-11 98.3 4.3 38 107-150 6-45 (460)
202 1ebd_A E3BD, dihydrolipoamide 98.2 3.7E-06 1.3E-10 91.0 11.4 102 107-286 170-271 (455)
203 1ps9_A 2,4-dienoyl-COA reducta 98.2 9.9E-07 3.4E-11 100.5 6.9 40 106-151 372-411 (671)
204 3t37_A Probable dehydrogenase; 98.2 1.8E-06 6.1E-11 95.3 8.6 68 215-297 213-281 (526)
205 3cgb_A Pyridine nucleotide-dis 98.2 4.7E-06 1.6E-10 91.0 11.7 98 107-286 186-283 (480)
206 1gte_A Dihydropyrimidine dehyd 98.2 7.2E-07 2.5E-11 106.2 5.3 54 565-620 948-1007(1025)
207 3ntd_A FAD-dependent pyridine 98.2 7.3E-06 2.5E-10 91.3 13.3 109 108-298 152-278 (565)
208 1xhc_A NADH oxidase /nitrite r 98.2 6E-06 2.1E-10 86.8 11.7 102 108-298 144-245 (367)
209 2eq6_A Pyruvate dehydrogenase 98.2 4.8E-06 1.7E-10 90.4 11.3 105 107-287 169-273 (464)
210 1trb_A Thioredoxin reductase; 98.2 1.4E-05 4.9E-10 81.7 14.2 102 107-285 145-247 (320)
211 1lqt_A FPRA; NADP+ derivative, 98.2 5.8E-07 2E-11 97.5 3.8 45 107-151 3-48 (456)
212 1zmd_A Dihydrolipoyl dehydroge 98.2 8.3E-06 2.9E-10 88.8 13.0 107 107-287 178-284 (474)
213 1xdi_A RV3303C-LPDA; reductase 98.2 6.9E-06 2.4E-10 90.1 12.4 99 107-286 182-280 (499)
214 2bc0_A NADH oxidase; flavoprot 98.2 6.4E-06 2.2E-10 90.1 11.6 99 107-286 194-292 (490)
215 1lvl_A Dihydrolipoamide dehydr 98.2 4.3E-06 1.5E-10 90.7 9.6 99 107-286 171-269 (458)
216 1m6i_A Programmed cell death p 98.1 1.2E-05 4.1E-10 88.0 13.0 114 107-298 180-293 (493)
217 2wpf_A Trypanothione reductase 98.1 1.2E-05 3.9E-10 88.2 12.7 103 107-286 191-293 (495)
218 4dna_A Probable glutathione re 98.1 1.1E-05 3.6E-10 87.7 12.0 99 107-286 170-269 (463)
219 1fec_A Trypanothione reductase 98.1 1.1E-05 3.8E-10 88.2 12.2 103 107-286 187-289 (490)
220 1ju2_A HydroxynitrIle lyase; f 98.1 1.8E-05 6E-10 87.6 13.9 67 218-297 200-271 (536)
221 2qae_A Lipoamide, dihydrolipoy 98.1 1.2E-05 4.2E-10 87.2 12.5 104 107-287 174-278 (468)
222 1gpe_A Protein (glucose oxidas 98.1 3.5E-06 1.2E-10 94.2 8.0 68 217-297 236-307 (587)
223 1o94_A Tmadh, trimethylamine d 98.1 1.4E-06 4.7E-11 100.1 4.8 40 106-151 388-427 (729)
224 3g5s_A Methylenetetrahydrofola 98.1 5.9E-06 2E-10 86.0 8.8 36 108-149 2-37 (443)
225 3o0h_A Glutathione reductase; 98.1 1.1E-05 3.9E-10 88.0 11.6 99 107-286 191-289 (484)
226 2a8x_A Dihydrolipoyl dehydroge 98.1 1.3E-05 4.4E-10 87.1 11.8 102 107-286 171-272 (464)
227 3iwa_A FAD-dependent pyridine 98.1 2.2E-05 7.4E-10 85.4 13.6 111 107-298 159-269 (472)
228 3ics_A Coenzyme A-disulfide re 98.1 1.3E-05 4.4E-10 89.8 11.8 107 107-298 187-293 (588)
229 1zk7_A HGII, reductase, mercur 98.1 2.4E-05 8.2E-10 84.9 13.1 98 107-287 176-273 (467)
230 1dxl_A Dihydrolipoamide dehydr 98.1 1E-05 3.5E-10 88.0 10.0 104 107-286 177-280 (470)
231 2b9w_A Putative aminooxidase; 98.0 3.1E-06 1.1E-10 90.5 5.9 42 106-153 5-47 (424)
232 1v0j_A UDP-galactopyranose mut 98.0 3.4E-06 1.2E-10 89.8 6.0 43 106-153 6-48 (399)
233 1fl2_A Alkyl hydroperoxide red 98.0 2.7E-05 9.3E-10 79.2 12.3 98 107-285 144-242 (310)
234 4b1b_A TRXR, thioredoxin reduc 98.0 2.5E-05 8.4E-10 86.3 12.7 100 106-287 222-321 (542)
235 3hdq_A UDP-galactopyranose mut 98.0 3.8E-06 1.3E-10 89.0 5.9 43 105-153 27-69 (397)
236 3ic9_A Dihydrolipoamide dehydr 98.0 3.2E-05 1.1E-09 84.6 13.2 102 107-286 174-275 (492)
237 3itj_A Thioredoxin reductase 1 98.0 2.5E-05 8.6E-10 80.3 11.8 98 107-285 173-271 (338)
238 2zbw_A Thioredoxin reductase; 98.0 3.8E-05 1.3E-09 79.1 13.0 101 107-285 152-252 (335)
239 3ab1_A Ferredoxin--NADP reduct 98.0 2E-05 6.8E-10 82.2 11.0 100 108-285 164-263 (360)
240 3urh_A Dihydrolipoyl dehydroge 98.0 3E-05 1E-09 84.8 12.7 105 107-287 198-302 (491)
241 3cty_A Thioredoxin reductase; 98.0 2.2E-05 7.6E-10 80.3 10.9 97 108-285 156-252 (319)
242 3dk9_A Grase, GR, glutathione 98.0 4.2E-05 1.4E-09 83.3 13.6 107 107-285 187-293 (478)
243 2e1m_A L-glutamate oxidase; L- 98.0 4.7E-06 1.6E-10 87.5 5.6 41 106-152 43-84 (376)
244 2jae_A L-amino acid oxidase; o 98.0 5.3E-06 1.8E-10 90.6 6.2 41 106-152 10-50 (489)
245 3lad_A Dihydrolipoamide dehydr 98.0 4.2E-05 1.4E-09 83.2 13.4 102 107-286 180-281 (476)
246 4eqs_A Coenzyme A disulfide re 98.0 1.2E-05 4.2E-10 86.5 8.9 94 108-286 148-241 (437)
247 1ojt_A Surface protein; redox- 98.0 1.7E-05 5.9E-10 86.5 10.0 104 107-287 185-288 (482)
248 1i8t_A UDP-galactopyranose mut 98.0 5.4E-06 1.8E-10 87.2 5.4 40 108-153 2-41 (367)
249 4g6h_A Rotenone-insensitive NA 97.9 1.2E-05 4.2E-10 88.1 8.1 36 106-147 41-76 (502)
250 3f8d_A Thioredoxin reductase ( 97.9 7.9E-05 2.7E-09 75.9 13.2 108 107-298 154-262 (323)
251 1sez_A Protoporphyrinogen oxid 97.9 7.2E-06 2.5E-10 89.8 5.6 41 106-152 12-52 (504)
252 3dgh_A TRXR-1, thioredoxin red 97.9 6.1E-05 2.1E-09 82.1 12.7 103 108-286 188-290 (483)
253 3kd9_A Coenzyme A disulfide re 97.9 5.3E-05 1.8E-09 81.8 12.1 107 108-298 149-255 (449)
254 2q0l_A TRXR, thioredoxin reduc 97.9 7.2E-05 2.5E-09 76.1 11.9 98 107-285 143-241 (311)
255 2bi7_A UDP-galactopyranose mut 97.8 1.2E-05 4.1E-10 85.0 5.8 40 107-152 3-42 (384)
256 1vdc_A NTR, NADPH dependent th 97.8 0.00011 3.7E-09 75.5 12.7 99 107-285 159-259 (333)
257 3r9u_A Thioredoxin reductase; 97.8 7.9E-05 2.7E-09 75.6 11.5 98 107-285 147-244 (315)
258 3dgz_A Thioredoxin reductase 2 97.8 0.00012 4.2E-09 79.8 13.4 103 108-286 186-288 (488)
259 2q7v_A Thioredoxin reductase; 97.8 0.0001 3.5E-09 75.5 11.8 96 108-285 153-249 (325)
260 1hyu_A AHPF, alkyl hydroperoxi 97.8 0.0001 3.6E-09 81.1 12.2 98 107-285 355-453 (521)
261 4dsg_A UDP-galactopyranose mut 97.8 1.8E-05 6.2E-10 86.4 5.9 42 106-153 8-50 (484)
262 3klj_A NAD(FAD)-dependent dehy 97.8 5.9E-06 2E-10 87.5 1.9 86 108-286 147-232 (385)
263 2iid_A L-amino-acid oxidase; f 97.8 1.7E-05 5.9E-10 86.7 5.7 42 105-152 31-72 (498)
264 4g6h_A Rotenone-insensitive NA 97.8 0.00012 4E-09 80.2 11.9 107 108-285 218-332 (502)
265 3d1c_A Flavin-containing putat 97.7 0.0001 3.5E-09 76.9 11.0 105 108-286 167-273 (369)
266 3lzw_A Ferredoxin--NADP reduct 97.7 0.00011 3.6E-09 75.3 10.0 97 107-285 154-250 (332)
267 3s5w_A L-ornithine 5-monooxyge 97.6 0.00028 9.5E-09 76.2 12.4 38 107-148 227-264 (463)
268 3qfa_A Thioredoxin reductase 1 97.6 0.00041 1.4E-08 76.2 13.7 102 108-285 211-315 (519)
269 2x8g_A Thioredoxin glutathione 97.6 0.00028 9.7E-09 79.0 12.4 101 108-286 287-396 (598)
270 1cjc_A Protein (adrenodoxin re 97.6 0.00027 9.4E-09 76.4 11.7 142 107-285 145-333 (460)
271 1b37_A Protein (polyamine oxid 97.6 4.4E-05 1.5E-09 82.9 5.1 40 107-152 4-44 (472)
272 3l8k_A Dihydrolipoyl dehydroge 97.6 0.0002 6.9E-09 77.6 10.3 103 107-287 172-274 (466)
273 2a87_A TRXR, TR, thioredoxin r 97.5 0.00016 5.3E-09 74.6 8.4 97 107-285 155-252 (335)
274 1gte_A Dihydropyrimidine dehyd 97.4 0.00043 1.5E-08 82.3 11.8 117 108-294 333-450 (1025)
275 2vdc_G Glutamate synthase [NAD 97.4 0.00017 5.9E-09 77.9 7.3 110 107-286 264-379 (456)
276 4a5l_A Thioredoxin reductase; 97.4 0.00083 2.8E-08 68.1 11.6 98 108-285 153-250 (314)
277 2z3y_A Lysine-specific histone 97.4 0.00012 4.1E-09 83.0 5.5 40 106-151 106-145 (662)
278 1kdg_A CDH, cellobiose dehydro 97.4 0.00012 4E-09 81.2 4.9 70 218-298 201-272 (546)
279 3fbs_A Oxidoreductase; structu 97.3 0.00052 1.8E-08 68.8 9.2 86 107-285 141-226 (297)
280 2gag_A Heterotetrameric sarcos 97.3 0.00035 1.2E-08 82.6 9.0 97 108-286 285-384 (965)
281 1dwl_A Ferredoxin I; electron 97.3 0.00016 5.5E-09 53.8 3.9 57 561-618 1-59 (59)
282 2xag_A Lysine-specific histone 97.3 0.00017 5.8E-09 83.6 5.9 40 106-151 277-316 (852)
283 1lqt_A FPRA; NADP+ derivative, 97.2 0.00089 3E-08 72.3 9.4 69 214-285 248-326 (456)
284 3uox_A Otemo; baeyer-villiger 97.0 0.0026 8.9E-08 70.2 11.5 35 107-147 185-219 (545)
285 1n4w_A CHOD, cholesterol oxida 97.0 0.0005 1.7E-08 75.3 5.4 61 218-286 227-289 (504)
286 1vg0_A RAB proteins geranylger 97.0 0.0007 2.4E-08 75.5 6.1 43 104-152 5-47 (650)
287 3ayj_A Pro-enzyme of L-phenyla 96.9 0.00037 1.3E-08 78.8 3.7 36 107-148 56-100 (721)
288 3gwf_A Cyclohexanone monooxyge 96.9 0.0034 1.2E-07 69.2 11.5 35 107-147 178-212 (540)
289 4gcm_A TRXR, thioredoxin reduc 96.9 0.006 2.1E-07 61.8 12.6 35 108-148 146-180 (312)
290 1jb0_C Photosystem I iron-sulf 96.9 0.00015 5.3E-09 57.8 0.0 66 560-626 1-73 (80)
291 1coy_A Cholesterol oxidase; ox 96.9 0.00064 2.2E-08 74.5 5.0 61 218-286 232-294 (507)
292 1xer_A Ferredoxin; electron tr 96.7 0.0002 7E-09 60.2 -0.7 60 560-620 36-103 (103)
293 1o94_A Tmadh, trimethylamine d 96.7 0.0016 5.5E-08 74.6 6.4 35 108-149 529-565 (729)
294 4ap3_A Steroid monooxygenase; 96.7 0.0067 2.3E-07 67.0 11.1 35 107-147 191-225 (549)
295 7fd1_A FD1, protein (7-Fe ferr 96.6 0.00056 1.9E-08 57.9 1.5 51 566-619 4-58 (106)
296 2xve_A Flavin-containing monoo 96.6 0.0044 1.5E-07 66.9 8.9 35 107-147 197-231 (464)
297 4fk1_A Putative thioredoxin re 96.6 0.0045 1.5E-07 62.6 8.1 100 108-298 147-247 (304)
298 2gv8_A Monooxygenase; FMO, FAD 96.5 0.0031 1.1E-07 67.8 7.1 34 107-146 212-246 (447)
299 3h8l_A NADH oxidase; membrane 96.5 0.0082 2.8E-07 63.5 10.1 53 213-286 219-271 (409)
300 3gyx_B Adenylylsulfate reducta 96.5 0.0007 2.4E-08 62.4 1.4 53 566-618 5-64 (166)
301 1ps9_A 2,4-dienoyl-COA reducta 96.4 0.0067 2.3E-07 68.7 9.2 52 216-285 577-628 (671)
302 3h28_A Sulfide-quinone reducta 96.3 0.0068 2.3E-07 64.6 8.0 54 215-285 203-256 (430)
303 1jnr_B Adenylylsulfate reducta 96.2 0.0012 4.1E-08 59.7 1.2 53 566-618 6-65 (150)
304 4a9w_A Monooxygenase; baeyer-v 96.1 0.0066 2.3E-07 62.3 6.8 33 107-146 163-195 (357)
305 2fdn_A Ferredoxin; electron tr 96.1 0.0033 1.1E-07 45.9 3.1 48 567-617 5-54 (55)
306 3sx6_A Sulfide-quinone reducta 96.1 0.012 4.2E-07 62.8 8.7 59 215-285 211-269 (437)
307 1rof_A Ferredoxin; electron tr 96.0 0.00094 3.2E-08 49.7 -0.3 56 561-618 2-59 (60)
308 3eun_A Ferredoxin; electron tr 96.0 0.0029 1E-07 50.6 2.5 51 565-618 3-61 (82)
309 1bc6_A 7-Fe ferredoxin; electr 95.8 0.0042 1.4E-07 49.0 2.5 50 566-618 4-57 (77)
310 4b63_A L-ornithine N5 monooxyg 95.6 0.069 2.3E-06 58.1 12.3 37 107-147 246-282 (501)
311 2v2k_A Ferredoxin; iron, trans 95.6 0.0036 1.2E-07 52.7 1.5 50 566-618 4-57 (105)
312 2fgo_A Ferredoxin; allochromat 95.4 0.0096 3.3E-07 47.5 3.5 52 565-619 3-62 (82)
313 2vpz_B NRFC protein; oxidoredu 95.4 0.006 2E-07 57.7 2.4 61 558-620 45-110 (195)
314 1h98_A Ferredoxin; electron tr 95.3 0.0036 1.2E-07 49.5 0.4 50 566-618 4-57 (78)
315 1rgv_A Ferredoxin; electron tr 95.0 0.01 3.6E-07 47.0 2.4 51 565-618 3-61 (80)
316 1dax_A Ferredoxin I; electron 94.8 0.0054 1.9E-07 46.2 0.3 55 562-618 4-62 (64)
317 3i9v_9 NADH-quinone oxidoreduc 94.6 0.0088 3E-07 55.6 1.0 54 566-619 49-117 (182)
318 1f2g_A Ferredoxin II; electron 94.5 0.0078 2.7E-07 44.3 0.4 51 566-618 5-58 (58)
319 2g1u_A Hypothetical protein TM 94.3 0.043 1.5E-06 49.4 5.2 35 107-147 19-53 (155)
320 1ti6_B Pyrogallol hydroxytrans 94.2 0.027 9.3E-07 56.1 3.7 54 566-621 64-120 (274)
321 1iqz_A Ferredoxin; iron-sulfer 93.8 0.014 4.7E-07 46.4 0.6 59 562-621 4-72 (81)
322 3fwz_A Inner membrane protein 93.8 0.062 2.1E-06 47.4 4.9 36 106-147 6-41 (140)
323 1hfe_L Protein (Fe-only hydrog 93.7 0.01 3.4E-07 63.1 -0.5 54 561-617 27-83 (421)
324 1w4x_A Phenylacetone monooxyge 93.5 0.33 1.1E-05 53.2 11.2 35 107-147 186-220 (542)
325 1id1_A Putative potassium chan 93.3 0.17 5.9E-06 45.1 7.2 33 108-146 4-36 (153)
326 1kqf_B FDH-N beta S, formate d 93.2 0.037 1.3E-06 55.7 2.8 52 566-619 96-152 (294)
327 2zvs_A Uncharacterized ferredo 93.1 0.022 7.5E-07 45.7 0.7 50 566-618 4-62 (85)
328 1lss_A TRK system potassium up 92.9 0.11 3.7E-06 45.3 5.0 33 108-146 5-37 (140)
329 3hyw_A Sulfide-quinone reducta 92.8 0.15 5.1E-06 54.2 6.9 55 215-286 203-257 (430)
330 1vg0_A RAB proteins geranylger 92.6 0.24 8.1E-06 55.2 8.4 57 211-282 377-434 (650)
331 2ivf_B Ethylbenzene dehydrogen 92.6 0.037 1.3E-06 57.0 1.7 52 566-619 147-203 (352)
332 3llv_A Exopolyphosphatase-rela 92.6 0.1 3.5E-06 45.9 4.4 33 108-146 7-39 (141)
333 3ic5_A Putative saccharopine d 92.5 0.13 4.5E-06 43.2 4.9 33 108-146 6-39 (118)
334 3vrd_B FCCB subunit, flavocyto 92.2 0.19 6.5E-06 52.6 6.8 51 218-285 208-258 (401)
335 1q16_B Respiratory nitrate red 91.9 0.065 2.2E-06 57.7 2.6 52 566-619 180-236 (512)
336 1dwl_A Ferredoxin I; electron 90.9 0.12 4E-06 37.7 2.4 26 592-618 1-26 (59)
337 1sez_A Protoporphyrinogen oxid 90.8 1.6 5.4E-05 47.0 12.4 36 414-455 460-495 (504)
338 2hmt_A YUAA protein; RCK, KTN, 90.5 0.22 7.4E-06 43.4 4.3 32 109-146 8-39 (144)
339 4dio_A NAD(P) transhydrogenase 90.3 0.24 8.4E-06 51.8 5.0 35 107-147 190-224 (405)
340 3or1_B Sulfite reductase beta; 90.2 0.046 1.6E-06 57.2 -0.5 51 566-616 214-274 (386)
341 1sj1_A Ferredoxin; thermostabi 90.2 0.038 1.3E-06 41.5 -0.9 55 562-618 4-64 (66)
342 3mm5_B Sulfite reductase, diss 90.1 0.1 3.4E-06 54.3 1.9 39 577-616 217-257 (366)
343 1xer_A Ferredoxin; electron tr 89.8 0.11 3.7E-06 43.1 1.6 28 592-619 37-64 (103)
344 3dfz_A SIRC, precorrin-2 dehyd 89.3 0.32 1.1E-05 46.6 4.6 33 107-145 31-63 (223)
345 3p2y_A Alanine dehydrogenase/p 89.3 0.3 1E-05 50.7 4.7 35 107-147 184-218 (381)
346 2c42_A Pyruvate-ferredoxin oxi 89.2 0.13 4.4E-06 61.8 2.2 55 564-618 682-764 (1231)
347 3l4b_C TRKA K+ channel protien 89.2 0.25 8.6E-06 47.0 3.9 32 109-146 2-33 (218)
348 3i83_A 2-dehydropantoate 2-red 89.1 0.32 1.1E-05 49.3 4.9 33 108-146 3-35 (320)
349 1kyq_A Met8P, siroheme biosynt 88.9 0.28 9.7E-06 48.5 4.1 34 107-146 13-46 (274)
350 3j16_B RLI1P; ribosome recycli 88.8 0.16 5.4E-06 56.5 2.4 58 558-616 4-71 (608)
351 3eun_A Ferredoxin; electron tr 88.8 0.21 7.3E-06 39.4 2.5 25 594-618 2-26 (82)
352 1dax_A Ferredoxin I; electron 88.5 0.1 3.5E-06 38.9 0.4 26 592-618 3-28 (64)
353 4g65_A TRK system potassium up 88.3 0.33 1.1E-05 52.1 4.4 52 108-165 4-63 (461)
354 1y56_A Hypothetical protein PH 88.0 0.43 1.5E-05 51.6 5.2 60 220-298 265-324 (493)
355 1x13_A NAD(P) transhydrogenase 87.9 0.4 1.4E-05 50.4 4.7 35 107-147 172-206 (401)
356 3hn2_A 2-dehydropantoate 2-red 87.8 0.37 1.3E-05 48.7 4.3 33 108-146 3-35 (312)
357 1l7d_A Nicotinamide nucleotide 87.8 0.46 1.6E-05 49.6 5.0 35 107-147 172-206 (384)
358 1mo9_A ORF3; nucleotide bindin 87.7 0.45 1.5E-05 51.8 5.2 36 108-149 215-250 (523)
359 2z3y_A Lysine-specific histone 87.6 5.3 0.00018 44.7 14.0 37 415-454 623-659 (662)
360 1iqz_A Ferredoxin; iron-sulfer 87.5 0.18 6.3E-06 39.7 1.4 26 592-618 3-28 (81)
361 1sj1_A Ferredoxin; thermostabi 87.4 0.21 7.3E-06 37.2 1.7 27 591-618 2-28 (66)
362 1lld_A L-lactate dehydrogenase 87.4 0.5 1.7E-05 47.8 4.9 33 108-146 8-42 (319)
363 2ewd_A Lactate dehydrogenase,; 87.3 0.61 2.1E-05 47.2 5.5 33 108-146 5-38 (317)
364 1n4w_A CHOD, cholesterol oxida 87.2 0.67 2.3E-05 50.2 6.1 37 106-148 4-40 (504)
365 2fdn_A Ferredoxin; electron tr 87.1 0.32 1.1E-05 34.9 2.4 25 593-618 2-26 (55)
366 3lk7_A UDP-N-acetylmuramoylala 87.0 0.45 1.5E-05 50.8 4.5 33 108-146 10-42 (451)
367 2zvs_A Uncharacterized ferredo 86.9 0.29 9.9E-06 38.9 2.3 24 595-618 3-26 (85)
368 1pjc_A Protein (L-alanine dehy 86.9 0.55 1.9E-05 48.6 5.0 33 108-146 168-200 (361)
369 2x5o_A UDP-N-acetylmuramoylala 86.9 0.37 1.3E-05 51.3 3.8 34 108-147 6-39 (439)
370 1rgv_A Ferredoxin; electron tr 86.8 0.21 7E-06 39.2 1.3 24 595-618 3-26 (80)
371 1h0h_B Formate dehydrogenase ( 86.8 0.17 6E-06 48.2 1.0 53 566-620 68-130 (214)
372 4e12_A Diketoreductase; oxidor 86.7 0.65 2.2E-05 46.2 5.2 33 108-146 5-37 (283)
373 3g17_A Similar to 2-dehydropan 86.6 0.49 1.7E-05 47.3 4.3 33 108-146 3-35 (294)
374 1jb0_C Photosystem I iron-sulf 86.6 0.24 8.3E-06 38.6 1.6 27 593-619 3-29 (80)
375 1pzg_A LDH, lactate dehydrogen 86.3 0.77 2.6E-05 46.8 5.6 33 108-146 10-43 (331)
376 2a9f_A Putative malic enzyme ( 86.3 0.66 2.3E-05 48.1 5.0 35 106-146 187-222 (398)
377 3gg2_A Sugar dehydrogenase, UD 86.3 0.59 2E-05 49.9 4.9 34 108-147 3-36 (450)
378 3l9w_A Glutathione-regulated p 86.2 0.77 2.6E-05 48.4 5.7 34 108-147 5-38 (413)
379 2fgo_A Ferredoxin; allochromat 86.1 0.25 8.7E-06 38.9 1.5 24 595-618 3-26 (82)
380 3ado_A Lambda-crystallin; L-gu 86.1 0.52 1.8E-05 47.8 4.2 33 108-146 7-39 (319)
381 1rof_A Ferredoxin; electron tr 85.8 0.27 9.4E-06 35.7 1.5 25 592-617 2-26 (60)
382 1jw9_B Molybdopterin biosynthe 85.6 0.72 2.5E-05 45.0 4.8 34 107-146 31-65 (249)
383 1ks9_A KPA reductase;, 2-dehyd 85.3 0.79 2.7E-05 45.3 5.1 33 109-147 2-34 (291)
384 1bg6_A N-(1-D-carboxylethyl)-L 85.0 0.76 2.6E-05 47.1 4.9 33 108-146 5-37 (359)
385 1f0y_A HCDH, L-3-hydroxyacyl-C 84.9 0.77 2.6E-05 46.0 4.8 32 109-146 17-48 (302)
386 3c8y_A Iron hydrogenase 1; dit 84.9 0.079 2.7E-06 58.6 -2.8 59 559-618 137-208 (574)
387 3mm5_A Sulfite reductase, diss 84.8 0.24 8.2E-06 52.1 1.0 36 577-615 264-301 (418)
388 3c85_A Putative glutathione-re 84.8 0.95 3.2E-05 41.5 5.0 35 107-146 39-73 (183)
389 2hjr_A Malate dehydrogenase; m 84.7 0.91 3.1E-05 46.2 5.3 33 108-146 15-48 (328)
390 1f2g_A Ferredoxin II; electron 84.6 0.13 4.3E-06 37.5 -0.9 23 593-617 2-24 (58)
391 2eez_A Alanine dehydrogenase; 84.6 0.83 2.8E-05 47.3 5.0 33 108-146 167-199 (369)
392 2raf_A Putative dinucleotide-b 84.5 0.95 3.3E-05 42.7 5.0 34 108-147 20-53 (209)
393 3ego_A Probable 2-dehydropanto 84.4 0.85 2.9E-05 45.9 4.8 32 108-146 3-34 (307)
394 2y0c_A BCEC, UDP-glucose dehyd 84.2 0.83 2.8E-05 49.1 4.9 33 108-146 9-41 (478)
395 3oj0_A Glutr, glutamyl-tRNA re 84.1 0.45 1.5E-05 41.9 2.3 34 107-146 21-54 (144)
396 2ew2_A 2-dehydropantoate 2-red 84.1 0.88 3E-05 45.5 4.8 32 109-146 5-36 (316)
397 2vhw_A Alanine dehydrogenase; 84.0 0.91 3.1E-05 47.2 5.0 34 107-146 168-201 (377)
398 1coy_A Cholesterol oxidase; ox 83.8 1.3 4.5E-05 48.0 6.3 36 106-147 10-45 (507)
399 1z82_A Glycerol-3-phosphate de 83.8 0.94 3.2E-05 46.1 4.9 35 106-146 13-47 (335)
400 3g0o_A 3-hydroxyisobutyrate de 83.7 0.96 3.3E-05 45.3 4.9 34 107-146 7-40 (303)
401 3qha_A Putative oxidoreductase 83.7 0.74 2.5E-05 46.0 4.0 36 106-147 14-49 (296)
402 1vl6_A Malate oxidoreductase; 83.7 1 3.5E-05 46.6 5.0 35 106-146 191-226 (388)
403 3ghy_A Ketopantoate reductase 83.7 0.92 3.1E-05 46.2 4.8 32 108-145 4-35 (335)
404 3vtf_A UDP-glucose 6-dehydroge 83.6 1.1 3.6E-05 47.6 5.3 34 108-147 22-55 (444)
405 4a7p_A UDP-glucose dehydrogena 83.5 1 3.5E-05 47.9 5.2 36 107-148 8-43 (446)
406 1b37_A Protein (polyamine oxid 83.4 1.1 3.8E-05 47.8 5.6 55 212-283 206-268 (472)
407 1t2d_A LDH-P, L-lactate dehydr 83.4 1.2 4E-05 45.2 5.4 33 108-146 5-38 (322)
408 1ur5_A Malate dehydrogenase; o 83.3 1.1 3.8E-05 45.1 5.2 33 108-146 3-36 (309)
409 1kdg_A CDH, cellobiose dehydro 82.9 1.3 4.4E-05 48.4 5.9 36 106-147 6-41 (546)
410 1nyt_A Shikimate 5-dehydrogena 82.2 1.2 4.1E-05 43.9 4.8 33 108-146 120-152 (271)
411 2dpo_A L-gulonate 3-dehydrogen 82.1 0.98 3.3E-05 45.8 4.2 34 108-147 7-40 (319)
412 2v6b_A L-LDH, L-lactate dehydr 82.0 1.2 4.1E-05 44.7 4.8 32 109-146 2-35 (304)
413 1y6j_A L-lactate dehydrogenase 81.8 1.3 4.5E-05 44.8 5.0 34 107-146 7-42 (318)
414 3or1_A Sulfite reductase alpha 81.6 0.43 1.5E-05 50.3 1.3 34 578-614 282-317 (437)
415 3ond_A Adenosylhomocysteinase; 81.6 1.1 3.6E-05 48.0 4.3 34 107-146 265-298 (488)
416 3eag_A UDP-N-acetylmuramate:L- 81.6 1.2 4.1E-05 45.2 4.6 33 109-147 6-39 (326)
417 3phh_A Shikimate dehydrogenase 81.4 1.5 5E-05 43.3 5.0 35 107-147 118-152 (269)
418 1guz_A Malate dehydrogenase; o 81.4 1.4 4.8E-05 44.4 5.1 34 109-146 2-35 (310)
419 3k96_A Glycerol-3-phosphate de 80.8 1.4 4.8E-05 45.4 4.9 34 107-146 29-62 (356)
420 4ffl_A PYLC; amino acid, biosy 80.6 1.6 5.4E-05 44.9 5.2 33 109-147 3-35 (363)
421 3l6d_A Putative oxidoreductase 80.4 1.7 5.8E-05 43.6 5.3 34 107-146 9-42 (306)
422 4ezb_A Uncharacterized conserv 80.4 1.5 5.1E-05 44.4 4.8 34 107-146 24-58 (317)
423 2xag_A Lysine-specific histone 80.3 10 0.00035 43.7 12.3 38 415-455 794-831 (852)
424 1pjq_A CYSG, siroheme synthase 80.1 1.5 5.1E-05 46.9 5.0 33 107-145 12-44 (457)
425 3doj_A AT3G25530, dehydrogenas 80.1 1.7 5.7E-05 43.8 5.1 34 108-147 22-55 (310)
426 3tl2_A Malate dehydrogenase; c 80.0 1.7 6E-05 43.8 5.2 32 108-145 9-41 (315)
427 1bc6_A 7-Fe ferredoxin; electr 79.7 0.88 3E-05 35.2 2.3 25 594-618 2-28 (77)
428 1mv8_A GMD, GDP-mannose 6-dehy 79.7 1.3 4.4E-05 47.0 4.3 32 109-146 2-33 (436)
429 3gvp_A Adenosylhomocysteinase 79.6 1.4 4.7E-05 46.3 4.3 34 107-146 220-253 (435)
430 3pid_A UDP-glucose 6-dehydroge 79.6 1.4 4.7E-05 46.6 4.4 37 104-147 33-69 (432)
431 3pef_A 6-phosphogluconate dehy 79.4 1.7 5.7E-05 43.1 4.8 33 109-147 3-35 (287)
432 3gvi_A Malate dehydrogenase; N 79.4 1.9 6.6E-05 43.7 5.3 34 108-147 8-42 (324)
433 2egg_A AROE, shikimate 5-dehyd 79.4 1.6 5.6E-05 43.6 4.7 34 107-146 141-175 (297)
434 1zcj_A Peroxisomal bifunctiona 79.0 1.6 5.3E-05 46.8 4.7 32 109-146 39-70 (463)
435 7fd1_A FD1, protein (7-Fe ferr 79.0 0.53 1.8E-05 39.1 0.8 25 594-618 2-28 (106)
436 3dtt_A NADP oxidoreductase; st 78.8 2 6.9E-05 41.5 5.1 34 107-146 19-52 (245)
437 4e21_A 6-phosphogluconate dehy 78.8 1.8 6.1E-05 44.6 4.9 34 107-146 22-55 (358)
438 1evy_A Glycerol-3-phosphate de 78.8 1.3 4.5E-05 45.6 4.0 32 109-146 17-48 (366)
439 2aef_A Calcium-gated potassium 78.6 0.85 2.9E-05 43.7 2.3 34 107-147 9-42 (234)
440 1zej_A HBD-9, 3-hydroxyacyl-CO 78.5 1.6 5.5E-05 43.6 4.4 33 107-146 12-44 (293)
441 3hwr_A 2-dehydropantoate 2-red 78.5 1.8 6.2E-05 43.6 4.8 33 107-146 19-51 (318)
442 1txg_A Glycerol-3-phosphate de 78.3 1.8 6.1E-05 43.8 4.7 30 109-144 2-31 (335)
443 3k6j_A Protein F01G10.3, confi 78.2 1.8 6.1E-05 46.1 4.8 34 108-147 55-88 (460)
444 3d4o_A Dipicolinate synthase s 78.1 2 7E-05 42.7 5.0 34 107-146 155-188 (293)
445 3ce6_A Adenosylhomocysteinase; 78.1 1.6 5.4E-05 47.0 4.3 34 107-146 274-307 (494)
446 2rir_A Dipicolinate synthase, 78.0 2.1 7E-05 42.9 5.0 34 107-146 157-190 (300)
447 2vns_A Metalloreductase steap3 77.9 2.2 7.6E-05 40.3 5.0 33 108-146 29-61 (215)
448 3ius_A Uncharacterized conserv 77.8 2.1 7.1E-05 42.0 4.9 33 108-146 6-38 (286)
449 2vpz_B NRFC protein; oxidoredu 77.8 0.75 2.5E-05 43.1 1.5 55 564-618 7-78 (195)
450 1a5z_A L-lactate dehydrogenase 77.7 2 6.8E-05 43.4 4.8 32 109-146 2-35 (319)
451 1p77_A Shikimate 5-dehydrogena 77.6 1.6 5.5E-05 43.0 4.0 33 108-146 120-152 (272)
452 1vpd_A Tartronate semialdehyde 77.6 1.7 5.9E-05 43.1 4.3 33 108-146 6-38 (299)
453 2p4q_A 6-phosphogluconate dehy 77.3 2.1 7.2E-05 46.2 5.1 36 106-147 9-44 (497)
454 3two_A Mannitol dehydrogenase; 77.2 2.2 7.5E-05 43.5 5.0 33 108-146 178-210 (348)
455 3p7m_A Malate dehydrogenase; p 77.2 2.6 8.7E-05 42.7 5.4 34 108-147 6-40 (321)
456 3pdu_A 3-hydroxyisobutyrate de 77.0 1.7 5.8E-05 43.0 4.1 33 109-147 3-35 (287)
457 2uyy_A N-PAC protein; long-cha 76.9 2.3 8E-05 42.6 5.1 34 108-147 31-64 (316)
458 1piw_A Hypothetical zinc-type 76.9 2.4 8.2E-05 43.5 5.3 33 108-146 181-213 (360)
459 1jay_A Coenzyme F420H2:NADP+ o 76.8 2.4 8.3E-05 39.6 4.9 32 109-146 2-34 (212)
460 3c7a_A Octopine dehydrogenase; 76.8 1.6 5.5E-05 45.6 4.0 31 108-144 3-34 (404)
461 3tnl_A Shikimate dehydrogenase 76.8 2.4 8.2E-05 42.8 5.1 34 107-146 154-188 (315)
462 1oju_A MDH, malate dehydrogena 76.7 2.3 7.7E-05 42.5 4.8 32 109-146 2-35 (294)
463 3don_A Shikimate dehydrogenase 76.5 1.8 6.1E-05 42.9 3.9 35 107-147 117-152 (277)
464 3bk7_A ABC transporter ATP-bin 76.4 0.93 3.2E-05 50.3 2.0 56 559-615 18-84 (607)
465 3pqe_A L-LDH, L-lactate dehydr 76.3 2.6 8.9E-05 42.7 5.2 33 108-146 6-40 (326)
466 3dhn_A NAD-dependent epimerase 76.2 3.3 0.00011 38.9 5.7 34 108-147 5-39 (227)
467 2r6j_A Eugenol synthase 1; phe 76.2 4.1 0.00014 40.6 6.7 34 108-147 12-46 (318)
468 2hk9_A Shikimate dehydrogenase 76.2 2.4 8.1E-05 41.8 4.8 33 108-146 130-162 (275)
469 3uko_A Alcohol dehydrogenase c 76.0 2.4 8E-05 43.9 4.9 33 108-146 195-228 (378)
470 3d1l_A Putative NADP oxidoredu 75.9 2.6 8.9E-05 41.1 5.0 33 108-146 11-44 (266)
471 2qrj_A Saccharopine dehydrogen 75.8 1.8 6.3E-05 44.9 3.9 34 107-146 214-251 (394)
472 3u62_A Shikimate dehydrogenase 75.6 2.7 9.1E-05 41.0 4.9 32 109-146 110-142 (253)
473 3cky_A 2-hydroxymethyl glutara 75.6 2.2 7.4E-05 42.5 4.4 33 108-146 5-37 (301)
474 3nep_X Malate dehydrogenase; h 75.5 2.7 9.4E-05 42.3 5.1 32 109-146 2-35 (314)
475 3jyo_A Quinate/shikimate dehyd 75.4 2.6 8.9E-05 41.8 4.8 34 107-146 127-161 (283)
476 1h98_A Ferredoxin; electron tr 75.3 0.81 2.8E-05 35.5 0.9 25 594-618 2-28 (78)
477 1x0v_A GPD-C, GPDH-C, glycerol 75.2 2 7E-05 43.8 4.2 34 108-147 9-49 (354)
478 3i9v_9 NADH-quinone oxidoreduc 75.2 0.72 2.5E-05 42.3 0.6 24 596-619 49-72 (182)
479 3d0o_A L-LDH 1, L-lactate dehy 75.1 2.8 9.4E-05 42.4 5.0 33 107-145 6-40 (317)
480 3gpi_A NAD-dependent epimerase 75.0 3.2 0.00011 40.7 5.4 34 108-147 4-37 (286)
481 1uuf_A YAHK, zinc-type alcohol 75.0 2.6 8.8E-05 43.5 4.9 33 108-146 196-228 (369)
482 2cf5_A Atccad5, CAD, cinnamyl 75.0 2.9 9.8E-05 42.8 5.2 33 108-146 182-214 (357)
483 1yj8_A Glycerol-3-phosphate de 74.9 2.4 8.1E-05 43.8 4.6 34 108-147 22-62 (375)
484 1gpj_A Glutamyl-tRNA reductase 74.8 2.5 8.6E-05 44.3 4.8 34 107-146 167-201 (404)
485 3ggo_A Prephenate dehydrogenas 74.7 3 0.0001 42.0 5.2 33 108-146 34-68 (314)
486 4huj_A Uncharacterized protein 74.6 1.5 5.1E-05 41.6 2.8 33 108-146 24-57 (220)
487 4dll_A 2-hydroxy-3-oxopropiona 74.6 2.4 8.2E-05 42.8 4.4 33 108-146 32-64 (320)
488 4gx0_A TRKA domain protein; me 74.5 2.7 9.2E-05 46.1 5.1 51 108-164 349-402 (565)
489 3i9v_3 NADH-quinone oxidoreduc 74.5 0.69 2.4E-05 53.1 0.4 57 560-618 172-238 (783)
490 2rcy_A Pyrroline carboxylate r 74.3 3.1 0.00011 40.3 5.1 34 108-147 5-42 (262)
491 3ew7_A LMO0794 protein; Q8Y8U8 74.3 3.3 0.00011 38.5 5.1 32 109-146 2-34 (221)
492 1yqd_A Sinapyl alcohol dehydro 74.3 2.7 9.3E-05 43.2 4.9 33 108-146 189-221 (366)
493 3fbt_A Chorismate mutase and s 74.2 2.6 8.9E-05 41.8 4.4 34 107-146 122-156 (282)
494 2f1k_A Prephenate dehydrogenas 74.2 2.9 9.8E-05 41.0 4.8 32 109-146 2-33 (279)
495 1nvt_A Shikimate 5'-dehydrogen 74.2 2.3 7.8E-05 42.2 4.1 32 108-146 129-160 (287)
496 2izz_A Pyrroline-5-carboxylate 74.1 2.7 9.3E-05 42.4 4.7 33 108-146 23-59 (322)
497 1hyh_A L-hicdh, L-2-hydroxyiso 74.0 2.9 9.9E-05 41.9 4.9 32 109-146 3-36 (309)
498 1zud_1 Adenylyltransferase THI 73.9 2.7 9.1E-05 40.9 4.4 34 107-146 28-62 (251)
499 1ez4_A Lactate dehydrogenase; 73.7 3.2 0.00011 41.9 5.1 33 107-145 5-39 (318)
500 1yqg_A Pyrroline-5-carboxylate 73.6 3.1 0.00011 40.3 4.9 32 109-146 2-34 (263)
No 1
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=100.00 E-value=3.9e-92 Score=793.55 Aligned_cols=529 Identities=55% Similarity=1.003 Sum_probs=467.1
Q ss_pred ccccCccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeee
Q 006778 101 MCRESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVP 180 (631)
Q Consensus 101 ~~~~~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~ 180 (631)
++++.|++||||||||||||++|+.|++...+.++|++|+||||++.+|++..+|+.+.++.+.++++.|.....++...
T Consensus 29 ~~~~~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~ 108 (584)
T 2gmh_A 29 MERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTP 108 (584)
T ss_dssp CCCCEEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEE
T ss_pred ccccccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeee
Confidence 35567789999999999999999999997555556999999999999988888899999999999999998766666655
Q ss_pred ccCcceEeeccCCcccCC---C-CCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCcc
Q 006778 181 VSSDKFWFLTKDRAFSLP---S-PFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGI 256 (631)
Q Consensus 181 ~~~~~~~~l~~~~~~~~p---~-~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~ 256 (631)
+..+.+.++.....+.++ . .+.+.+.|++++..|.++|.+++++.||+|+++++|++++.++++.|++|.+.++|+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~ 188 (584)
T 2gmh_A 109 VTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGI 188 (584)
T ss_dssp CCEEEEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEE
T ss_pred echhheeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccc
Confidence 555666666654444443 2 244566899999999999999999999999999999999998777888899998888
Q ss_pred ccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCcceeeEEEEEEeecCCCCCCCcEEEEeccCC
Q 006778 257 AKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPL 336 (631)
Q Consensus 257 ~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~~~~~ 336 (631)
+++|+++++|++|.+++||+||+|||.+|.+++++.+.+++.. ...++.+++|++++|.++.....++.+.|+++||+
T Consensus 189 ~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~--~~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~ 266 (584)
T 2gmh_A 189 QKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRA--NCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPL 266 (584)
T ss_dssp CTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTT--TSCCCCEEEEEEEEEECCGGGCCTTEEEEEEETTS
T ss_pred cCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCC--CCCchhHHhhhhhheecCcccccCCeEEEEEeccc
Confidence 8999999999999999999999999999999999999999873 55678889999999988876677888899999998
Q ss_pred CCCCcceEEEEEeC--CCeEEEEEEEcCCCCCCCCCcHHHHHHhhcCcchhccccCCceeeecceeeccCCcccCCcccC
Q 006778 337 DQKTYGGSFLYHMN--DRQIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVF 414 (631)
Q Consensus 337 ~~~~~G~~~~~~~~--~~~~~ig~~~~~d~~~~~~~~~~~~~~~~~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~ 414 (631)
....+++.|+|+.. ++.++++++...++.++..++.+++++++.||.+.+++++++.+.++.+.++.+++..+++|..
T Consensus 267 ~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~p~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (584)
T 2gmh_A 267 DRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLSPFREFQRWKHHPSIKPTLEGGKRIAYGARALNEGGFQSIPKLTF 346 (584)
T ss_dssp CTTSCEEEEEEECCSSSCEEEEEEEEETTCCCTTCCHHHHHHHHTTSTTTHHHHTTCEEEEEEEEEEECCGGGGCCCCEE
T ss_pred cCCcCCceEEEEecCCCCeEEEEEEEecCcccccCChHHHHHHHHhChHHHHHhCCCeEEEecceEccCCCcccCCcccc
Confidence 76667889999998 7899999998887777777788889999889999999998888888888888888888899999
Q ss_pred CCEEEEccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCC-----Cch---HHHHHHHHHHhHHHHHHHHHhccchhhh
Q 006778 415 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE-----DSN---MEIYWDTLQKSWVWQELQRARNYRPAFE 486 (631)
Q Consensus 415 ~~v~LiGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~-----~~~---l~~Y~~~~~~~~~~~~l~~~r~~~~~~~ 486 (631)
+|++|||||||+++|+.|||+++||+||++||++|.+++.. ..+ |+.|++.|+++|+.++++.+|+++++|+
T Consensus 347 ~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~~~~~a~~~L~~Ye~~r~~~~v~~~l~~~r~~~~~~~ 426 (584)
T 2gmh_A 347 PGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCH 426 (584)
T ss_dssp TTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCCSSSSCCCTHHHHHHHTSHHHHHHHHTTTTTGGGG
T ss_pred CCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCcchhhhhhhHHHHHHHHHHhHHHHHHHHHhChhHHHH
Confidence 99999999999999999999999999999999999987642 233 8999999999999999999999999985
Q ss_pred -h-cchHHHHHHHHHHHHhcCCCCccccCCCCCcccchhhhcCCCCCCCCCCCCccccccccccccCCccCCCCCCceEe
Q 006778 487 -Y-GLLPGLAICGLEHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQPAHLRL 564 (631)
Q Consensus 487 -~-g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 564 (631)
+ |+|++++..+++.|+.+|+.||+++|.++|+.++.++++++||+||||||+||||+++||++|||+|+||||+||+|
T Consensus 427 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hl~~ 506 (584)
T 2gmh_A 427 GILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTL 506 (584)
T ss_dssp STTTHHHHHHHHHHHTTTTTTCCSCCCCCCSCGGGCCCCGGGSCCCCCCCCCSSSSCCHHHHHHTTTCBCCSSSCCSEEE
T ss_pred HhhccHHHHHHHHHHHHHcCCCCCCccCCCCCCchhhhhHHhcCCCCCCCccccccccccchhhhccccccCCCCCeEEE
Confidence 3 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCccc------ccCCccccce--EEE-c-CCCCe-EEEEecCCccccccccccCCCCCcceeCCCCCCCCCCCCC
Q 006778 565 RDPKIPEL------VNLPEYAGPE--YVP-D-EKNQL-KLQINAQNCLHCKACDIKDPKQNIKWTVPEGGGGPGYSVM 631 (631)
Q Consensus 565 ~~~~~~~~------~~~~~~~~p~--~~~-~-~~~~~-~~~~~~~~c~~c~tC~i~~p~~~i~w~~p~gg~g~~y~~~ 631 (631)
+|+++|.. |...+..||+ |.+ + +++.. +++||++||||||||+|+||++||+|++||||+||+|++|
T Consensus 507 ~d~~~~~~~~~~~~~~~c~~~CPa~~~~~~~~~~~~~~~~~i~~~~Ci~C~~C~~~cp~~~i~~~~p~gg~g~~~~~~ 584 (584)
T 2gmh_A 507 KDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDGFRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 584 (584)
T ss_dssp SSTTHHHHTHHHHHCCTHHHHCTTCCEEEEECSSTTCEEEEECGGGCCCCCHHHHHCTTCCEEECCCSTTCBCCCSCC
T ss_pred cCcccchhhchhhhcchhhhcCChhhEEEeecCCCCceEEEEeCCCCcCCCCchhhCCCCCceeECCCCCCCcCccCC
Confidence 99999843 3333678999 755 3 34423 7999999999999999999999999999999999999998
No 2
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.3e-34 Score=309.30 Aligned_cols=339 Identities=20% Similarity=0.293 Sum_probs=222.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
+|||+|||||||||++|+.|++. |++|+||||++.++....+|+.+.++.+.++ . .......+...+. ..
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~------G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l-~-~~~~~~~~~~~~~--~~ 73 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKY------GLKTLMIEKRPEIGSPVRCGEGLSKGILNEA-D-IKADRSFIANEVK--GA 73 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSTTCSCCSCCEEETHHHHHT-T-CCCCTTTEEEEES--EE
T ss_pred CCCEEEECcCHHHHHHHHHHHHC------CCcEEEEeCCCCCCCCCceecccCHHHHHHc-C-CCchhhhhhcccc--eE
Confidence 59999999999999999999999 9999999999988887778888888776543 1 1111111222222 22
Q ss_pred EeeccC--CcccCCC-CCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcc
Q 006778 187 WFLTKD--RAFSLPS-PFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (631)
Q Consensus 187 ~~l~~~--~~~~~p~-~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~ 263 (631)
.+.... .....+. .......|+++|..+.++|.+.+++.|++++++++|+++..++ +.+.+|.... +|+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~-~~~~~v~~~~-----~~~-- 145 (397)
T 3oz2_A 74 RIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN-GKVAGAKIRH-----NNE-- 145 (397)
T ss_dssp EEECTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET-TEEEEEEEEE-----TTE--
T ss_pred EEEeCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeecc-ceeeeeeecc-----ccc--
Confidence 222211 1111111 1223347899999999999999999999999999999998876 5665665432 121
Q ss_pred ccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCcceeeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcce
Q 006778 264 ENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGG 343 (631)
Q Consensus 264 ~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~~~~~~~~~~G~ 343 (631)
+.+++||+||+|||.+|.+++.+ ++.. ............ .+........++....+++.. .. .|.
T Consensus 146 -----~~~~~a~~vIgAdG~~S~vr~~~----g~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~--~g~ 210 (397)
T 3oz2_A 146 -----IVDVRAKMVIAADGFESEFGRWA----GLKS-VILARNDIISAL--QYRMINVDVDPDYTDFYLGSI-AP--AGY 210 (397)
T ss_dssp -----EEEEEEEEEEECCCTTCHHHHHH----TCGG-GCCCGGGEEEEE--EEEEESCCCCTTEEEEECSTT-ST--TEE
T ss_pred -----ceEEEEeEEEeCCccccHHHHHc----CCCc-ccccceeeeeeE--EEEeeccccCcccceeeeecc-CC--Cce
Confidence 36799999999999999998865 5542 111112222211 122223333445444444432 22 256
Q ss_pred EEEEEeCCCeEEEEEEEcCCCCCCCCCcHHHHHHh-hcCcchhccccCCceeeecceeeccCCcccCCcccCCCEEEEcc
Q 006778 344 SFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKF-KHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGC 422 (631)
Q Consensus 344 ~~~~~~~~~~~~ig~~~~~d~~~~~~~~~~~~~~~-~~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGD 422 (631)
.|++|..++..++++....+.........+.++++ ..+|.+.. ...+......++..... .++..+|++|+||
T Consensus 211 ~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~--~~~~~~~v~lvGD 284 (397)
T 3oz2_A 211 IWVFPKGEGMANVGIGSSINWIHNRFELKNYLDRFIENHPGLKK----GQDIQLVTGGVSVSKVK--MPITMPGLMLVGD 284 (397)
T ss_dssp EEEEEEETTEEEEEEEEETTTSCSHHHHHHHHHHHHHTCHHHHT----SEEEEEEEEEEECCCCC--SCCEETTEEECGG
T ss_pred EEEeecccceeEEEEeeccchhhhhhhHHHHHHHHHHhCccccc----cceeeeeeccccccCcc--cceeeeeEEEccc
Confidence 89999999999999887655433222223334444 34554432 33333332334433322 3567799999999
Q ss_pred CCccCCCCCCcchHHHHHHHHHHHHHHhcccCC----CchHHHHHHHHHHhHHHHHHHHHhccchhh
Q 006778 423 AAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYRPAF 485 (631)
Q Consensus 423 AA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~----~~~l~~Y~~~~~~~~~~~~l~~~r~~~~~~ 485 (631)
|||+++|+.|||+++||+||.+||++|.+++.. ...|+.|++.+++++. ++.......++.+
T Consensus 285 AA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~~~~~~L~~Ye~~~~~~~~-~~~~~~~~~~~~~ 350 (397)
T 3oz2_A 285 AARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKERFE-RKHLRNWVAKEKL 350 (397)
T ss_dssp GGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred ccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 999999999999999999999999999988754 3578999999998744 4443444444433
No 3
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.98 E-value=1.1e-30 Score=279.86 Aligned_cols=339 Identities=19% Similarity=0.256 Sum_probs=225.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
++||+|||||++|+++|+.|++. |++|+||||.+.+|....++..+..+.+.++ ..|.. ..... .....+
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~------G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~l-g~~~~-~~~~~--~~~~~~ 73 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKY------GLKTLMIEKRPEIGSPVRCGEGLSKGILNEA-DIKAD-RSFIA--NEVKGA 73 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSTTCSCCSCCEEETHHHHHT-TCCCC-TTTEE--EEESEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHC------CCCEEEEeCCCCCCCCcccccccCHHHHHHc-CCCCC-hHHhh--hhcceE
Confidence 58999999999999999999999 9999999999877776666766666555433 11111 00111 111222
Q ss_pred EeeccCC-c-ccCCCC-CCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcc
Q 006778 187 WFLTKDR-A-FSLPSP-FSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (631)
Q Consensus 187 ~~l~~~~-~-~~~p~~-~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~ 263 (631)
.+..... . +.++.. ......+.+++..+.+.|.+.+++.|++|+.+++|+++..++ +.+.+|.+.+. +
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~-----~--- 144 (397)
T 3cgv_A 74 RIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN-GKVAGAKIRHN-----N--- 144 (397)
T ss_dssp EEECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET-TEEEEEEEEET-----T---
T ss_pred EEEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeC-CEEEEEEEEEC-----C---
Confidence 2222211 1 222211 112347889999999999999999999999999999998875 66766776421 1
Q ss_pred ccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCcceeeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcce
Q 006778 264 ENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGG 343 (631)
Q Consensus 264 ~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~~~~~~~~~~G~ 343 (631)
++.+++||+||+|+|.+|.+++.+ ++.. ....+..+..++.. .+......++....+++. ... .|.
T Consensus 145 ----~~~~~~a~~vV~A~G~~s~~~~~~----g~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~--~g~ 210 (397)
T 3cgv_A 145 ----EIVDVRAKMVIAADGFESEFGRWA----GLKS-VILARNDIISALQY--RMINVDVDPDYTDFYLGS-IAP--AGY 210 (397)
T ss_dssp ----EEEEEEEEEEEECCCTTCHHHHHH----TCCT-TCCCGGGEEEEEEE--EEESCCCCTTEEEEECST-TST--TEE
T ss_pred ----eEEEEEcCEEEECCCcchHhHHhc----CCCc-cCCChhheeEEEEE--EeccCCCCCCcEEEEeCC-cCC--Cce
Confidence 157899999999999999887765 5541 02223444444432 233222334444444432 222 255
Q ss_pred EEEEEeCCCeEEEEEEEcCCCCCCCCCcHHHHHHhh-cCcchhccccCCceeeecceeeccCCcccCCcccCCCEEEEcc
Q 006778 344 SFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFK-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGC 422 (631)
Q Consensus 344 ~~~~~~~~~~~~ig~~~~~d~~~~~~~~~~~~~~~~-~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGD 422 (631)
.|++|..++.+.+++....+.......+.+.++.+. .+|.+ ...+........+|..+ ..+++..+|++++||
T Consensus 211 ~~~~P~~~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~p~~~--~~~~~~~~~v~liGD 284 (397)
T 3cgv_A 211 IWVFPKGEGMANVGIGSSINWIHNRFELKNYLDRFIENHPGL----KKGQDIQLVTGGVSVSK--VKMPITMPGLMLVGD 284 (397)
T ss_dssp EEEEEEETTEEEEEEEEETTTCSCHHHHHHHHHHHHHTCHHH----HTSEEEEEEEEEEECCC--CCSCCEETTEEECGG
T ss_pred EEEEECCCCeEEEEEEeccccccCCCCHHHHHHHHHHhCcCC----CCCeEEeeeeeeeecCC--CccceeeCCEEEEEc
Confidence 899999999999998876543211122333444442 23322 23344443334455433 246788899999999
Q ss_pred CCccCCCCCCcchHHHHHHHHHHHHHHhcccCC----CchHHHHHHHHHHhHHHHHHHHHhccchhh
Q 006778 423 AAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYRPAF 485 (631)
Q Consensus 423 AA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~----~~~l~~Y~~~~~~~~~~~~l~~~r~~~~~~ 485 (631)
|||+++|+.|+|+++|++||..||+.|.+.+.. ...|+.|++.+++. +.+++...+.+..++
T Consensus 285 Aa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~~~~~~~l~~Y~~~~~~~-~~~~~~~~~~~~~~~ 350 (397)
T 3cgv_A 285 AARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKER-FERKHLRNWVAKEKL 350 (397)
T ss_dssp GGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 999999999999999999999999999886532 25789999999876 788888888877766
No 4
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.97 E-value=2.4e-30 Score=282.81 Aligned_cols=342 Identities=16% Similarity=0.178 Sum_probs=218.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCC-CccccccccChHhHHHHhhhhhhcCCCe-eeeccC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG-AHIISGNVFEPRALNELLPQWKQEEAPI-RVPVSS 183 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g-~~~~~g~~i~~~~l~~l~~~~~~~~~~~-~~~~~~ 183 (631)
+++||+||||||||+++|+.|++. |++|+||||.+... +...+|..+..+.+.++ ....... ......
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~------G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~l----g~~~~~~~~~~~~~ 74 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRR------GLKILLVDSKPWNRIGDKPCGDAVSKAHFDKL----GMPYPKGEELENKI 74 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSS------SCCEEEECSSCGGGTTCSCCCCEEEHHHHHHT----TCCCCCGGGEEEEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCCCCCCCcccccccccHHHHHHh----cCCCCchHHHHhhh
Confidence 469999999999999999999999 99999999987642 23345555544444332 1111000 000011
Q ss_pred cceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcc
Q 006778 184 DKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (631)
Q Consensus 184 ~~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~ 263 (631)
..+.++.......++. ....+.++|..+.+.|.+.+.+.|++|+++++|+++..++ +.|++|++.+. .+|+
T Consensus 75 ~~~~~~~~~~~~~~~~---~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~---~~G~-- 145 (453)
T 3atr_A 75 NGIKLYSPDMQTVWTV---NGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFED-GYVKGAVLFNR---RTNE-- 145 (453)
T ss_dssp EEEEEECTTSSCEEEE---EEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET-TEEEEEEEEET---TTTE--
T ss_pred cceEEECCCCceEEeE---CCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC-CEEEEEEEEEc---CCCc--
Confidence 1122222211111110 1125789999999999999999999999999999998865 56766766420 0222
Q ss_pred ccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCcc--cccCCcceeeEEEEEEeecCCCCCCCcEEEEeccCCCCCCc
Q 006778 264 ENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREK--SHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTY 341 (631)
Q Consensus 264 ~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~~~~~~~~~~ 341 (631)
..+++||+||+|||.+|.+++.+ +...+ ....+..+..++...+.++.....++....+++.+...+
T Consensus 146 -----~~~~~ad~VV~AdG~~s~vr~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 214 (453)
T 3atr_A 146 -----ELTVYSKVVVEATGYSRSFRSKL----PPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPG-- 214 (453)
T ss_dssp -----EEEEECSEEEECCGGGCTTGGGS----CTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTT--
T ss_pred -----eEEEEcCEEEECcCCchhhHHhc----CCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCC--
Confidence 14899999999999999988754 44310 011222456666665555433223343333444333333
Q ss_pred ceEEEEEeCCCeEEEEEEEcCCCCCCCCCcHHHHHHhh-c-CcchhccccCCceeeecceeeccCCcccCCcccCCCEEE
Q 006778 342 GGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFK-H-HPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAI 419 (631)
Q Consensus 342 G~~~~~~~~~~~~~ig~~~~~d~~~~~~~~~~~~~~~~-~-~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~L 419 (631)
|..|++|..++.+++++....+.. ...+.+.+..+. . .+.+ .+.+.+......++.. ...++|..+|++|
T Consensus 215 g~~~~~P~~~~~~~vg~~~~~~~~--~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~p~~--~~~~~~~~~~v~l 286 (453)
T 3atr_A 215 GYWWYFPKGKNKVNVGLGIQGGMG--YPSIHEYYKKYLDKYAPDV----DKSKLLVKGGALVPTR--RPLYTMAWNGIIV 286 (453)
T ss_dssp SCEEEEEEETTEEEEEEEEESSSC--CCCHHHHHHHHHHHHCTTE----EEEEEEEEEEEEEECS--SCCSCSEETTEEE
T ss_pred cEEEEEECCCCeEEEEEEecCCCC--CCCHHHHHHHHHHhhhhhc----CCCeEEeccceeccCC--CCCCceecCCEEE
Confidence 458999999999999988754321 122334443332 1 2222 2122332222233432 2456788899999
Q ss_pred EccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCC----CchHHHHHHHHHHhHHHHHHHHHhccchhhh
Q 006778 420 IGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 486 (631)
Q Consensus 420 iGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~----~~~l~~Y~~~~~~~~~~~~l~~~r~~~~~~~ 486 (631)
+|||||+++|+.|||+++||+||..||++|.+.+.. ..+|..|++.+++. +.+.+...+.++.++.
T Consensus 287 vGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~~~~~~~L~~Y~~~r~~~-~~~~~~~~~~~~~~~~ 356 (453)
T 3atr_A 287 IGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDFSASGLWDMNICYVNE-YGAKQASLDIFRRFLQ 356 (453)
T ss_dssp CGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSTTTTTHHHHHHHHH-THHHHHHHHHHHHHHT
T ss_pred EeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999876531 46799999999976 6777777777776653
No 5
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.97 E-value=1.2e-29 Score=273.35 Aligned_cols=333 Identities=16% Similarity=0.100 Sum_probs=209.4
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHH-----hhhhhhcCCCeee
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNEL-----LPQWKQEEAPIRV 179 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l-----~~~~~~~~~~~~~ 179 (631)
...+||+||||||+||++|+.|++. |++|+||||.+.... ...+..+.+..+..+ .+.+.....+
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~------G~~V~v~E~~~~~~~-~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~--- 90 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS------GIDCDVYEAVKEIKP-VGAAISVWPNGVKCMAHLGMGDIMETFGGP--- 90 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSCC-----CEEEECHHHHHHHHHTTCHHHHHHHSCC---
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC------CCCEEEEeCCCCCCC-cCeeEEECHHHHHHHHHCCCHHHHHhhcCC---
Confidence 4569999999999999999999999 999999999886543 234555666554221 1111111111
Q ss_pred eccCcceEeeccC-Cc--ccCCCC----CCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeC
Q 006778 180 PVSSDKFWFLTKD-RA--FSLPSP----FSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTN 252 (631)
Q Consensus 180 ~~~~~~~~~l~~~-~~--~~~p~~----~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~ 252 (631)
...+.+.... .. ..++.. ......+.++|..|.+.|.+.+.+ ++|+++++|+++..+++ .+ .|++.
T Consensus 91 ---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~-~v-~v~~~ 163 (407)
T 3rp8_A 91 ---LRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDAD-GV-TVWFT 163 (407)
T ss_dssp ---CCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETT-EE-EEEET
T ss_pred ---CcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCC-cE-EEEEc
Confidence 1222222211 11 111100 011347889999999999999987 89999999999998774 34 47776
Q ss_pred CCccccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCcceee-EEEEEEeecCCCCCCCcEEEE
Q 006778 253 DMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYAL-GIKEVWEIDEGKHNPGEILHT 331 (631)
Q Consensus 253 d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~g~~~h~ 331 (631)
| |.+++||+||+|||.+|.+|+.+. +... .+...+. .+.....++...........+
T Consensus 164 ~---------------g~~~~a~~vV~AdG~~S~vr~~l~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (407)
T 3rp8_A 164 D---------------GSSASGDLLIAADGSHSALRPWVL---GFTP----QRRYAGYVNWNGLVEIDEALAPGDQWTTF 221 (407)
T ss_dssp T---------------SCEEEESEEEECCCTTCSSHHHHH---SSCC----CCEEEEEEEEEEEEECCTTTCCTTEEEEE
T ss_pred C---------------CCEEeeCEEEECCCcChHHHHHhc---CCCC----CCcccCcEEEEEEEecccccCCCCceEEE
Confidence 6 678999999999999999999762 3321 1122222 233333333322222222222
Q ss_pred eccCCCCCCcceEEEEEeCCCeEEEEEEEcCCCCCCCCCcH---HHH-HHhhc-CcchhccccCCceee-ecceeeccCC
Q 006778 332 LGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPY---EEF-QKFKH-HPAIKPLLEGGTVVQ-YGARTLNEGG 405 (631)
Q Consensus 332 ~~~~~~~~~~G~~~~~~~~~~~~~ig~~~~~d~~~~~~~~~---~~~-~~~~~-~p~i~~~l~~~~~~~-~~~~~i~~gg 405 (631)
++ .+ +..|++|..++.+.+.+....+... ...+. +.+ +.+.. .|.+.++++...... ......+..
T Consensus 222 ~~----~~--~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 293 (407)
T 3rp8_A 222 VG----EG--KQVSLMPVSAGRFYFFFDVPLPAGL-AEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIE- 293 (407)
T ss_dssp EE----TT--EEEEEEEETTTEEEEEEEEECCTTC-SCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECC-
T ss_pred EC----CC--cEEEEEEcCCCeEEEEEEeCCCcCC-CCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEecC-
Confidence 21 22 4578999999988887776533211 11222 222 22222 344444443221110 001112211
Q ss_pred cccCCcccCCCEEEEccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHhHHHHHHHHHhccchhh
Q 006778 406 LQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKSWVWQELQRARNYRPAF 485 (631)
Q Consensus 406 ~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~~~~l~~Y~~~~~~~~~~~~l~~~r~~~~~~ 485 (631)
..++|..+|++|||||||.++|+.|||+++||+||..||++|.+......+|+.|++.|+.. ....+..++.+..++
T Consensus 294 --~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~l~~Y~~~r~~~-~~~~~~~s~~~~~~~ 370 (407)
T 3rp8_A 294 --PFSRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQTRDIAAALREYEAQRCDR-VRDLVLKARKRCDIT 370 (407)
T ss_dssp --CCSCCEETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred --CCCceecCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhh
Confidence 22688889999999999999999999999999999999999987542246799999999975 777888888888877
Q ss_pred hh
Q 006778 486 EY 487 (631)
Q Consensus 486 ~~ 487 (631)
+.
T Consensus 371 ~~ 372 (407)
T 3rp8_A 371 HG 372 (407)
T ss_dssp TT
T ss_pred hc
Confidence 53
No 6
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.96 E-value=1.4e-28 Score=265.74 Aligned_cols=328 Identities=18% Similarity=0.177 Sum_probs=203.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHH--h---hhhhhcCCCeeee
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNEL--L---PQWKQEEAPIRVP 180 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l--~---~~~~~~~~~~~~~ 180 (631)
+++||+|||||++|+++|+.|++. |++|+|+||.+.... ..|..+.+..+.-+ + +.+.....+..
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~------G~~V~v~E~~~~~~~--~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~-- 73 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKS------GFKVKIVEKQKFPRF--VIGESLLPRCMEHLDEAGFLDAVKAQGFQQK-- 73 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT------TCCEEEECSSCSSCC--CSCCBCCGGGHHHHHHTTCHHHHHHTTCEEE--
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC------CCCEEEEeCCCCCCC--cccCcccHhHHHHHHHcCChHHHHHcCCccc--
Confidence 358999999999999999999999 999999999875432 34555655443211 1 11111111110
Q ss_pred ccCcceEeeccC--CcccCCCCC--CCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCcc
Q 006778 181 VSSDKFWFLTKD--RAFSLPSPF--SNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGI 256 (631)
Q Consensus 181 ~~~~~~~~l~~~--~~~~~p~~~--~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~ 256 (631)
....+.... ..+.+.... .....+.++|..+.+.|.+.+++.|++|+++++|+++..++++.++.|.+.+
T Consensus 74 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~--- 147 (421)
T 3nix_A 74 ---FGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDIN--- 147 (421)
T ss_dssp ---CEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETT---
T ss_pred ---CCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCC---
Confidence 111111111 111222111 1233688999999999999999999999999999999988765555566554
Q ss_pred ccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCcceeeEEEEEEeecCCCCCCCcEEEEeccCC
Q 006778 257 AKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPL 336 (631)
Q Consensus 257 ~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~~~~~ 336 (631)
|+ ..+++||+||+|+|.+|.+++. ++++.+ ...+....+........+......+....++. +.
T Consensus 148 ---g~-------~~~~~a~~vV~A~G~~s~l~~~----~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 211 (421)
T 3nix_A 148 ---GN-------KREIEARFIIDASGYGRVIPRM----FGLDKP-SGFESRRTLFTHIKDVKRPVAAEMEGNRITAV-VH 211 (421)
T ss_dssp ---SC-------EEEEEEEEEEECCGGGCHHHHH----TTCEEC-CSSCCCEEEEEEEECTTCCC----CCSEEEEE-EE
T ss_pred ---CC-------EEEEEcCEEEECCCCchhhHHh----cCCCCC-CcCCCcEEEEEEECCCcCCCccCCCCeEEEEE-eC
Confidence 22 1379999999999999977764 466531 11122222211110011111111122222221 11
Q ss_pred CCCCcceEEEEEeCCCeEEEEEEEcCCCCCC-CCCcHHHHHHh-hcCcchhccccCCceeeecceeeccCCcccCCcccC
Q 006778 337 DQKTYGGSFLYHMNDRQIALGLVVALNYHNP-FLNPYEEFQKF-KHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVF 414 (631)
Q Consensus 337 ~~~~~G~~~~~~~~~~~~~ig~~~~~d~~~~-~~~~~~~~~~~-~~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~ 414 (631)
.. .|..|++|..++...++++...+.... ...+.+.++.+ ..+|.+.+.++...... ..+.++... ...+++..
T Consensus 212 ~~--~g~~~~~P~~~~~~~vg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~l~~~~~~~-~~~~~~~~~-~~~~~~~~ 287 (421)
T 3nix_A 212 KP--KVWIWVIPFSNGNTSVGFVGEPSYFDEYTGTPEERMRAMIANEGHIAERFKSEEFLF-EPRTIEGYA-ISASKLYG 287 (421)
T ss_dssp ET--TEEEEEEECTTSEEEEEEEECHHHHTTSCSCHHHHHHHHHHTCTTTHHHHTTCCBSS-CCEEEECCC-BEESCSEE
T ss_pred CC--CEEEEEEEECCCCEEEEEEecHHHhhhcCCCHHHHHHHHHHhCcHHHHHHhcCcccc-Cceeecccc-eeeeeecc
Confidence 11 245789999999999999876543222 12445555554 45777777776554331 111121111 12346778
Q ss_pred CCEEEEccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCCC--chHHHHHHHHHHh
Q 006778 415 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHED--SNMEIYWDTLQKS 469 (631)
Q Consensus 415 ~~v~LiGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~~--~~l~~Y~~~~~~~ 469 (631)
+++++||||||+++|+.|+|+++|++||..||++|.+.+..+ ..+..|++.++..
T Consensus 288 ~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~~~~~~~~~y~~~~~~~ 344 (421)
T 3nix_A 288 DGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLKGEEVNWEKDFVEHMMQG 344 (421)
T ss_dssp TTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHTHHHHHHH
T ss_pred CCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999887653 4567788777653
No 7
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.96 E-value=1.8e-28 Score=272.08 Aligned_cols=328 Identities=18% Similarity=0.230 Sum_probs=208.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhh---hh---hcCCCeee
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQ---WK---QEEAPIRV 179 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~---~~---~~~~~~~~ 179 (631)
+++||||||||++||++|+.|++. |++|+||||.+.... ..|..+.+..+..++.. +. ....+...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~------G~~V~liE~~~~~~~--~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~ 77 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMR------GHRVLLLEREAFPRH--QIGESLLPATVHGICAMLGLTDEMKRAGFPIKR 77 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT------TCCEEEECSSCSSCC--CSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEEC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC------CCCEEEEccCCCCCC--CCCcccCcchHHHHHHHhCcHHHHHHcCCcccc
Confidence 468999999999999999999999 999999999874332 23444444433222221 11 11111110
Q ss_pred eccCcceEeeccCC--cccCC--CCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCc
Q 006778 180 PVSSDKFWFLTKDR--AFSLP--SPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMG 255 (631)
Q Consensus 180 ~~~~~~~~~l~~~~--~~~~p--~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g 255 (631)
. ..+.+..... .+.+. ........|.+++..+.+.|.+.+++.|++|+++++|+++..++ +.+.+|.+.+
T Consensus 78 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~-~~v~gv~~~~-- 151 (512)
T 3e1t_A 78 G---GTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEG-ERAVGVRYRN-- 151 (512)
T ss_dssp E---EEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEET-TEEEEEEEEC--
T ss_pred C---ceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEEC-CEEEEEEEEe--
Confidence 0 0011111000 01111 11122336789999999999999999999999999999999865 5676676654
Q ss_pred cccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCcceeeEEEEEEeecCC--CCCCCcEEEEec
Q 006778 256 IAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEG--KHNPGEILHTLG 333 (631)
Q Consensus 256 ~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~g~~~h~~~ 333 (631)
.+|+. .+++||+||+|+|.+|.+++++ +... ........++...+..... ....+...+.+.
T Consensus 152 --~dG~~-------~~i~ad~VI~AdG~~S~vr~~l----g~~~---~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 215 (512)
T 3e1t_A 152 --TEGVE-------LMAHARFIVDASGNRTRVSQAV----GERV---YSRFFQNVALYGYFENGKRLPAPRQGNILSAAF 215 (512)
T ss_dssp --SSSCE-------EEEEEEEEEECCCTTCSSGGGT----CCEE---ECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEE
T ss_pred --CCCCE-------EEEEcCEEEECCCcchHHHHHc----CCCc---cCchhcceEEEEEecCCccCCCCCcCceEEEEe
Confidence 33431 5899999999999999998865 5442 1111223344433332111 112233333221
Q ss_pred cCCCCCCcceEEEEEeCCCeEEEEEEEcCCCCCCC-CCcHHHHHHh-hcCcchhccccCCceeee-cceeecc-CCc-cc
Q 006778 334 WPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPF-LNPYEEFQKF-KHHPAIKPLLEGGTVVQY-GARTLNE-GGL-QS 408 (631)
Q Consensus 334 ~~~~~~~~G~~~~~~~~~~~~~ig~~~~~d~~~~~-~~~~~~~~~~-~~~p~i~~~l~~~~~~~~-~~~~i~~-gg~-~~ 408 (631)
. .|..|++|..++...++++...+..... ..+.+.++.+ ..+|.+.+++........ ....++. ..+ ..
T Consensus 216 ----~--~G~~~~~Pl~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~ 289 (512)
T 3e1t_A 216 ----Q--DGWFWYIPLSDTLTSVGAVVSREAAEAIKDGHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYC 289 (512)
T ss_dssp ----T--TEEEEEEECSSSEEEEEEEEEHHHHTTTSSCHHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEEESCCEE
T ss_pred ----C--CceEEEEEeCCCeEEEEEEecHHHhhhhcCCHHHHHHHHHHhCchHHHHHhcCccccccccccceeecccccc
Confidence 1 2557899999999999998765433222 2345555555 567778777765543321 1011111 111 12
Q ss_pred CCcccCCCEEEEccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCCC----chHHHHHHHHHHh
Q 006778 409 IPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHED----SNMEIYWDTLQKS 469 (631)
Q Consensus 409 ~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~~----~~l~~Y~~~~~~~ 469 (631)
.++++.+|++|||||||+++|+.|||+++||+||..||++|...+... .+|+.|++.+++.
T Consensus 290 ~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l~~~~~~~~aL~~Ye~~~~~~ 354 (512)
T 3e1t_A 290 NTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLAGEMSEQRCFEEFERRYRRE 354 (512)
T ss_dssp ESCSBCSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHH
T ss_pred ccccccCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHH
Confidence 357778999999999999999999999999999999999998877542 4688999998876
No 8
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.96 E-value=1.3e-26 Score=255.92 Aligned_cols=335 Identities=15% Similarity=0.054 Sum_probs=203.0
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCc
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (631)
.+++||+||||||+||++|+.|++. |++|+||||.+..+.. ..+..+.++.+. ++..+......... ....
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~------G~~v~vlE~~~~~~~~-~r~~~l~~~~~~-~l~~lGl~~~~~~~-~~~~ 80 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLG------GVDVMVLEQLPQRTGE-SRGLGFTARTME-VFDQRGILPAFGPV-ETST 80 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESCSSCCCC-CCSEEECHHHHH-HHHHTTCGGGGCSC-CEES
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCCCCCCC-CceeEECHHHHH-HHHHCCCHHHHHhc-cccc
Confidence 3579999999999999999999999 9999999998876432 356677777663 33332211100000 0001
Q ss_pred ceEeeccCCcccCCCCC-CCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcc
Q 006778 185 KFWFLTKDRAFSLPSPF-SNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (631)
Q Consensus 185 ~~~~l~~~~~~~~p~~~-~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~ 263 (631)
...+ . ...++..... .....+.+++..+.+.|.+.+++.|++|+++++|+++..++++ | .|++.+ .+|
T Consensus 81 ~~~~-~-~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~----~~g--- 149 (499)
T 2qa2_A 81 QGHF-G-GRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDH-V-VVEVEG----PDG--- 149 (499)
T ss_dssp EEEE-T-TEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC-E-EEEEEC----SSC---
T ss_pred ccee-c-ceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE-E-EEEEEc----CCC---
Confidence 1111 0 0111111101 1112578999999999999999999999999999999988754 4 366554 112
Q ss_pred ccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCcceeeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcce
Q 006778 264 ENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGG 343 (631)
Q Consensus 264 ~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~~~~~~~~~~G~ 343 (631)
..+++||+||+|||.+|.+|+.+ ++... ....... ++.....++. .+.. .+... ... |.
T Consensus 150 -----~~~~~a~~vVgADG~~S~VR~~l----g~~~~-~~~~~~~--~~~~~v~~~~---~~~~-~~~~~---~~~--g~ 208 (499)
T 2qa2_A 150 -----PRSLTTRYVVGCDGGRSTVRKAA----GFDFP-GTSASRE--MFLADIRGCE---ITPR-PIGET---VPL--GM 208 (499)
T ss_dssp -----EEEEEEEEEEECCCTTCHHHHHT----TCCCC-EECCCCC--EEEEEEESCC---CCCE-EEEEE---ETT--EE
T ss_pred -----cEEEEeCEEEEccCcccHHHHHc----CCCCC-CCCCccE--EEEEEEEECC---CCcc-eEEEE---CCC--eE
Confidence 14799999999999999998864 55431 1111111 2222222221 1222 22211 112 44
Q ss_pred EEEEEeCCCeEEEEEEEcCCCCC---CCCCcHHHHHHhhcCcchhccccCCceeeecceeeccCCcccCCcccCCCEEEE
Q 006778 344 SFLYHMNDRQIALGLVVALNYHN---PFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAII 420 (631)
Q Consensus 344 ~~~~~~~~~~~~ig~~~~~d~~~---~~~~~~~~~~~~~~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~Li 420 (631)
.+++|.+++...+.+........ ...++.+..+.++.. +...+...+. .+. ..++. .....++|..+|++|+
T Consensus 209 ~~~~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~-~~~-~~~~~-~~~~a~~~~~grv~L~ 283 (499)
T 2qa2_A 209 VMSAPLGDGVDRIIVCERGAPARRRTGPPPYQEVAAAWQRL--TGQDISHGEP-VWV-SAFGD-PARQVSAYRRGRVLLA 283 (499)
T ss_dssp EEEEECSSSCEEEEEEETTCCCCCCSSSCCHHHHHHHHHHH--HSCCCTTCEE-EEE-EEECC-CEEECSCSEETTEEEC
T ss_pred EEEEEcCCCEEEEEEEecCCCCccccCCCCHHHHHHHHHHH--hCCCCCccce-eEE-EEEeC-CcEEcccccCCCEEEE
Confidence 68899988887777664321111 112222222333211 0011111111 111 01111 1123457778999999
Q ss_pred ccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCC---CchHHHHHHHHHHhHHHHHHHHHhccchhhh
Q 006778 421 GCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 486 (631)
Q Consensus 421 GDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~---~~~l~~Y~~~~~~~~~~~~l~~~r~~~~~~~ 486 (631)
|||||.++|+.|||+|+||+||..||+.|...+.. ...|+.|+++|+.. ..+.+..++....++.
T Consensus 284 GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~~~~~~L~~Ye~eR~~~-~~~~~~~s~~~~~l~~ 351 (499)
T 2qa2_A 284 GDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGRAPAGLLDTYHEERHPV-GRRLLMNTQAQGMLFL 351 (499)
T ss_dssp GGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred ecccccCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999887643 46799999998864 5656666665555554
No 9
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.96 E-value=9.8e-27 Score=256.89 Aligned_cols=336 Identities=14% Similarity=0.049 Sum_probs=202.4
Q ss_pred cCccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccC
Q 006778 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSS 183 (631)
Q Consensus 104 ~~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~ 183 (631)
+.+++||+||||||+||++|+.|++. |++|+||||.+..+.. ..+..+.++.+. ++..+......... ...
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~------G~~v~vlE~~~~~~~~-~r~~~l~~~~~~-~l~~lGl~~~~~~~-~~~ 78 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLA------GVEVVVLERLVERTGE-SRGLGFTARTME-VFDQRGILPRFGEV-ETS 78 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT------TCCEEEEESCCC-CCC-CCSEEECHHHHH-HHHTTTCGGGGCSC-CBC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEeCCCCCCCC-CCcceECHHHHH-HHHHCCCHHHHHhc-ccc
Confidence 34679999999999999999999999 9999999998876532 346677777663 33332211100000 001
Q ss_pred cceEeeccCCcccCCCCC-CCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCc
Q 006778 184 DKFWFLTKDRAFSLPSPF-SNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSK 262 (631)
Q Consensus 184 ~~~~~l~~~~~~~~p~~~-~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~ 262 (631)
....+ . ...++..... .....+.+++..+.+.|.+.+++.|++|+++++|+++..++++ | .|++.+ .+|
T Consensus 79 ~~~~~-~-~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~-v-~v~~~~----~~g-- 148 (500)
T 2qa1_A 79 TQGHF-G-GLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAG-V-TVEVRG----PEG-- 148 (500)
T ss_dssp CEEEE-T-TEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTE-E-EEEEEE----TTE--
T ss_pred ccccc-c-ceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe-E-EEEEEc----CCC--
Confidence 11111 0 0011111000 1112578999999999999999999999999999999988753 4 365554 111
Q ss_pred cccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCcceeeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcc
Q 006778 263 KENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYG 342 (631)
Q Consensus 263 ~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~~~~~~~~~~G 342 (631)
..+++||+||+|||.+|.+|+++ ++... ...... .++.....++. .++. .+... ... |
T Consensus 149 ------~~~~~a~~vVgADG~~S~VR~~l----g~~~~-~~~~~~--~~~~~~~~~~~---~~~~-~~~~~---~~~--g 206 (500)
T 2qa1_A 149 ------KHTLRAAYLVGCDGGRSSVRKAA----GFDFP-GTAATM--EMYLADIKGVE---LQPR-MIGET---LPG--G 206 (500)
T ss_dssp ------EEEEEESEEEECCCTTCHHHHHT----TCCCC-EECCCC--EEEEEEEESCC---CCCE-EEEEE---ETT--E
T ss_pred ------CEEEEeCEEEECCCcchHHHHHc----CCCcC-CCccce--EEEEEEEEeCC---CCCc-eEEEE---CCC--c
Confidence 14799999999999999998864 55431 111111 12222222221 1222 22211 112 4
Q ss_pred eEEEEEeCCCeEEEEEEEcCCCCC---CCCCcHHHHHHhhcCcchhccccCCceeeecceeeccCCcccCCcccCCCEEE
Q 006778 343 GSFLYHMNDRQIALGLVVALNYHN---PFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAI 419 (631)
Q Consensus 343 ~~~~~~~~~~~~~ig~~~~~d~~~---~~~~~~~~~~~~~~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~L 419 (631)
..+++|.+++...+.+........ ...++.+..+.++.. +...+...+. .+.. .++. .....++|..+|++|
T Consensus 207 ~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~-~~~~-~~~~-~~~~a~~~~~grv~L 281 (500)
T 2qa1_A 207 MVMVGPLPGGITRIIVCERGTPPQRRETPPSWHEVADAWKRL--TGDDIAHAEP-VWVS-AFGN-ATRQVTEYRRGRVIL 281 (500)
T ss_dssp EEEEEEETTTEEEEEEEETTCCC-----CCCHHHHHHHHHHH--HSCCCTTSEE-EEEE-EEEC-CEEECSCSEETTEEE
T ss_pred EEEEEEcCCCEEEEEEEcCCCCCccccCCCCHHHHHHHHHHh--cCCCCCccce-eEEE-Eecc-CcEEccccccCCEEE
Confidence 568899998887777664321111 112222222333211 0001111111 1110 1111 112345777899999
Q ss_pred EccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCC---CchHHHHHHHHHHhHHHHHHHHHhccchhhh
Q 006778 420 IGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 486 (631)
Q Consensus 420 iGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~---~~~l~~Y~~~~~~~~~~~~l~~~r~~~~~~~ 486 (631)
+|||||.++|+.|||+|+||+||..||+.|...+.. ...|+.|+++|+.. ..+.+..++.+..++.
T Consensus 282 ~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~-~~~~~~~s~~~~~l~~ 350 (500)
T 2qa1_A 282 AGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGTATEELLDSYHSERHAV-GKRLLMNTQAQGLLFL 350 (500)
T ss_dssp CGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred EEccccCCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999887643 36799999998864 5555666655555554
No 10
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.96 E-value=1.4e-27 Score=254.81 Aligned_cols=323 Identities=15% Similarity=0.120 Sum_probs=193.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.+||+||||||+||++|+.|++. |++|+||||.+..+. ...+..+.+..+. ++..+...............+
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~------G~~v~viE~~~~~~~-~~~~~~l~~~~~~-~l~~~g~~~~~~~~~~~~~~~ 82 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN------GWDVRLHEKSSELRA-FGAGIYLWHNGLR-VLEGLGALDDVLQGSHTPPTY 82 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSCCC-CSSEEEEEHHHHH-HHHHTTCHHHHHTTCBCCSCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHC------CCCEEEEecCCCCCC-CCceEEeCccHHH-HHHHcCCHHHHHhhCCCccce
Confidence 58999999999999999999999 999999999887653 2234445554442 222211100000000111222
Q ss_pred EeeccCCcc-cCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccc
Q 006778 187 WFLTKDRAF-SLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (631)
Q Consensus 187 ~~l~~~~~~-~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (631)
.+......+ .++.. ....+.++|..|.+.|.+.+++.|++|+++++|+++.. ++ .|++.+
T Consensus 83 ~~~~~g~~~~~~~~~--~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~------------ 143 (379)
T 3alj_A 83 ETWMHNKSVSKETFN--GLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQT------------ 143 (379)
T ss_dssp EEEETTEEEEEECGG--GCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETT------------
T ss_pred EEEeCCceeeeccCC--CCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECC------------
Confidence 222221000 11110 22368899999999999999999999999999999976 34 366665
Q ss_pred ccCceEEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCccee-eEEEEEEeecC---CCCCCCcEEEEe-ccCCCCCC
Q 006778 266 FQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYA-LGIKEVWEIDE---GKHNPGEILHTL-GWPLDQKT 340 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~-~g~~~~~~~~~---~~~~~g~~~h~~-~~~~~~~~ 340 (631)
|.+++||+||+|||.+|.+++.+ +... .+...+ ..+........ ....++...+.+ .| ..+
T Consensus 144 ---g~~~~ad~vV~AdG~~s~vr~~l----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~- 209 (379)
T 3alj_A 144 ---GEVLEADLIVGADGVGSKVRDSI----GFKQ----DRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFW--PRV- 209 (379)
T ss_dssp ---SCEEECSEEEECCCTTCHHHHHH----CCCE----EEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCS--SSC-
T ss_pred ---CCEEEcCEEEECCCccHHHHHHh----cCCC----CcCcCCcEEEEEEechhhccCCcCCcccccccceEE--CCC-
Confidence 66899999999999999998865 3321 111112 12222222210 111123333322 12 122
Q ss_pred cceEEEEEeCCCeEEEEEEEcCCCCCCCCCcHHHHHHh-hcCcchhccccCC---ceeeecceeeccCCcccCCcccCCC
Q 006778 341 YGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKF-KHHPAIKPLLEGG---TVVQYGARTLNEGGLQSIPYPVFPG 416 (631)
Q Consensus 341 ~G~~~~~~~~~~~~~ig~~~~~d~~~~~~~~~~~~~~~-~~~p~i~~~l~~~---~~~~~~~~~i~~gg~~~~p~~~~~~ 416 (631)
|..|++|.+++...+++....+...+ ....+.+..+ ...+.+.++++.. ....+. + ......++|..+|
T Consensus 210 -~~~~~~p~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~--~~~~~~~~~~~~r 282 (379)
T 3alj_A 210 -QRILYSPCNENELYLGLMAPAADPRG-SSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYD---K--YETTKLDSWTRGK 282 (379)
T ss_dssp -CEEEEEECSSSEEEEEEEECTTCTTT-TCSSCCHHHHHHHCGGGHHHHHHHHTCTTCCEE---E--EEEEEESCSEETT
T ss_pred -CEEEEEECCCCcEEEEEEecCCCCCH-HHHHHHHhcCCchhccHHHHHhhCCccceEEec---c--cccCCCCCcccCc
Confidence 44789999998888776664311111 0011112222 1122222333211 111111 1 0111245778899
Q ss_pred EEEEccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHhHHHHHHHHH
Q 006778 417 GAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKSWVWQELQRA 478 (631)
Q Consensus 417 v~LiGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~~~~l~~Y~~~~~~~~~~~~l~~~ 478 (631)
++|||||||.++|+.|||+++||+||..||+.|........+|+.|++.|+.. ..+.+..+
T Consensus 283 v~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~~~l~~Y~~~r~~~-~~~~~~~s 343 (379)
T 3alj_A 283 VALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEGSSVEDALVAWETRIRPI-TDRCQALS 343 (379)
T ss_dssp EEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred EEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHH-HHHHHHHh
Confidence 99999999999999999999999999999999976422246789999999865 55444444
No 11
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.95 E-value=1e-26 Score=260.20 Aligned_cols=333 Identities=14% Similarity=0.070 Sum_probs=196.0
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhh---hhcCCCeeeec
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQW---KQEEAPIRVPV 181 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~---~~~~~~~~~~~ 181 (631)
.+++||+||||||+||++|+.|++. |++|+||||.+.... ...+..+.+..+. ++..+ ........ ..
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~------G~~V~VlEr~~~~~~-~~r~~~l~~~s~~-~l~~lGl~~~l~~~~~-~~ 117 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAG------GVGALVLEKLVEPVG-HDRAGALHIRTVE-TLDLRGLLDRFLEGTQ-VA 117 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHT------TCCEEEEBSCSSCCC-SSSCCCBCHHHHH-HHHTTTCHHHHTTSCC-BC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEcCCCCCCC-CceEEEECHHHHH-HHHHcCChHHHHhcCc-cc
Confidence 3579999999999999999999999 999999999876543 2446667776653 22222 11100000 00
Q ss_pred cCcceEeeccC--CcccCCCC-CCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEe--CCCcc
Q 006778 182 SSDKFWFLTKD--RAFSLPSP-FSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGT--NDMGI 256 (631)
Q Consensus 182 ~~~~~~~l~~~--~~~~~p~~-~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~--~d~g~ 256 (631)
. .. .+... ..+..... ......+.+++..+.+.|.+.+++.|++|+++++|+++..++++ | .|++ .+
T Consensus 118 ~-~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~-v-~v~~~~~~--- 189 (570)
T 3fmw_A 118 K-GL--PFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEA-V-EVTVAGPS--- 189 (570)
T ss_dssp S-BC--CBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSC-E-EEEEEETT---
T ss_pred C-Cc--eeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCe-E-EEEEEeCC---
Confidence 0 00 00000 01111100 11123567999999999999999999999999999999887755 3 3554 44
Q ss_pred ccCCCccccccCc-eEEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCcceeeEEEEEEeecCCCCCCCcEEEEeccC
Q 006778 257 AKDGSKKENFQRG-VELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWP 335 (631)
Q Consensus 257 ~~~G~~~~~f~~g-~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~~~~ 335 (631)
| .+++||+||+|||.+|.+|+.+ ++... ...... .++.. .+...... . .+.|.
T Consensus 190 ------------G~~~~~a~~vV~ADG~~S~vR~~l----Gi~~~-~~~~~~--~~~~~--~v~~~~~~--~---~~~~~ 243 (570)
T 3fmw_A 190 ------------GPYPVRARYGVGCDGGRSTVRRLA----ADRFP-GTEATV--RALIG--YVTTPERE--V---PRRWE 243 (570)
T ss_dssp ------------EEEEEEESEEEECSCSSCHHHHHT----TCCCC-CCCCCE--EEEEE--ECCCCSCS--S---CCCCC
T ss_pred ------------CcEEEEeCEEEEcCCCCchHHHHc----CCCCc-cceeee--EEEEE--EEEecCCC--c---ceEEE
Confidence 5 6899999999999999988864 65531 111111 12221 22211111 0 12221
Q ss_pred CCCCCcceEEE-EEeCCCeE-EEEEEEcCCCC---CCCCCcHHHHHHhhcCcchhccccCCceeeecceeeccCCcccCC
Q 006778 336 LDQKTYGGSFL-YHMNDRQI-ALGLVVALNYH---NPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIP 410 (631)
Q Consensus 336 ~~~~~~G~~~~-~~~~~~~~-~ig~~~~~d~~---~~~~~~~~~~~~~~~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p 410 (631)
.. ..|..|+ +|..++.. ++.+....... .......+..+.+... +...+...+...+. ..++. .....+
T Consensus 244 ~~--~~G~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~-~~~~~-~~~~a~ 317 (570)
T 3fmw_A 244 RT--PDGILVLAFPPEGGLGPGWSSSSTGHSPAADEGPVTLEDLGAAVARV--RGTPLTLTEPVSWL-SRFGD-ASRQAK 317 (570)
T ss_dssp CC--CSSCEEECCCC------CEEEEEESCC-----CCCCHHHHHHHTTSS--SSCCCCCCSCCEEE-EEECC-CCEECS
T ss_pred ec--CCEEEEEEeecCCCeEEEEEEEeCCCCccccccCCCHHHHHHHHHHH--hhcccccceeeeee-EEeec-cccccc
Confidence 12 2244555 68888776 66666542211 1112223333333321 11111111111010 01111 112345
Q ss_pred cccCCCEEEEccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCC---CchHHHHHHHHHHhHHHHHHHHHhccchhhhh
Q 006778 411 YPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQELQRARNYRPAFEY 487 (631)
Q Consensus 411 ~~~~~~v~LiGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~---~~~l~~Y~~~~~~~~~~~~l~~~r~~~~~~~~ 487 (631)
+|..+|++|+|||||.++|+.|||+|+||+||..||+.|.+.+.. ...|+.|+++++.. ....+..++.+..+|..
T Consensus 318 ~~~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g~~~~~lL~~Ye~eR~~~-~~~~~~~s~~~~~l~~~ 396 (570)
T 3fmw_A 318 RYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRGWGSEELLDTYHDERHPV-AERVLLNTRAQLALMRP 396 (570)
T ss_dssp CSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHSCS
T ss_pred ccccCCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcC
Confidence 778899999999999999999999999999999999999886543 46799999999865 66677777777666653
No 12
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.95 E-value=2.3e-27 Score=254.13 Aligned_cols=339 Identities=14% Similarity=0.097 Sum_probs=192.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCC-CccccccccChHhHHHHhhhhhhcCCCeeeeccCc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG-AHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g-~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (631)
|++||+||||||+||++|+.|++. |++|+||||.+... .....++.+.+..+. ++..+..............
T Consensus 1 m~~dV~IvGaG~aGl~~A~~L~~~------G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~-~l~~lg~~~~~~~~~~~~~ 73 (394)
T 1k0i_A 1 MKTQVAIIGAGPSGLLLGQLLHKA------GIDNVILERQTPDYVLGRIRAGVLEQGMVD-LLREAGVDRRMARDGLVHE 73 (394)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHH------TCCEEEECSSCHHHHHTCCCCCEECHHHHH-HHHHTTCCHHHHHHCEEES
T ss_pred CCccEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCCCCcccCCCceEeECHHHHH-HHHHcCCcHHHHhcCCccc
Confidence 368999999999999999999999 99999999987421 011223346665542 2222211000000000111
Q ss_pred ceEeeccCCcccCC--CCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEe-CCCccccCCC
Q 006778 185 KFWFLTKDRAFSLP--SPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGT-NDMGIAKDGS 261 (631)
Q Consensus 185 ~~~~l~~~~~~~~p--~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~-~d~g~~~~G~ 261 (631)
.+.+........++ ........+.+.+..+.+.|.+.+.+.|++|+++++|+++..++++.+ .|++ .+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~-------- 144 (394)
T 1k0i_A 74 GVEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERD-------- 144 (394)
T ss_dssp CEEEEETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEET--------
T ss_pred eEEEEECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecC--------
Confidence 12221111111111 000122356788999999999999988999999999999987643333 4655 34
Q ss_pred ccccccCce--EEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCcceeeEEEEEE-eecCCCCCCCcEEEEeccCCCC
Q 006778 262 KKENFQRGV--ELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVW-EIDEGKHNPGEILHTLGWPLDQ 338 (631)
Q Consensus 262 ~~~~f~~g~--~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~g~~~h~~~~~~~~ 338 (631)
|. +++||+||+|||.+|.+|+.+ +... .......+..++..+. ..+.. .+. ..+ . ...
T Consensus 145 -------g~~~~~~a~~vV~AdG~~S~vr~~l----~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~-~---~~~ 205 (394)
T 1k0i_A 145 -------GERLRLDCDYIAGCDGFHGISRQSI----PAER-LKVFERVYPFGWLGLLADTPPV--SHE-LIY-A---NHP 205 (394)
T ss_dssp -------TEEEEEECSEEEECCCTTCSTGGGS----CGGG-CEEEEEEEEEEEEEEEESSCCS--CSS-CEE-E---CCT
T ss_pred -------CcEEEEEeCEEEECCCCCcHHHHhc----Cccc-cccccccccceeEEEecCCCCC--ccc-eEE-E---EcC
Confidence 44 799999999999999998864 3321 0000111122222211 11111 111 111 1 112
Q ss_pred CCcceEEEEEeCCCeEEEEEEEcCCCCCCCCCcHHHHHHhhc-Ccc-hhccccCCceeeecceeeccCCcccCCcccCCC
Q 006778 339 KTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKH-HPA-IKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPG 416 (631)
Q Consensus 339 ~~~G~~~~~~~~~~~~~ig~~~~~d~~~~~~~~~~~~~~~~~-~p~-i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~ 416 (631)
. |..|+++..++...+.+............+.+..+.+.. .+. +...+........ ..++...+ ..++|..+|
T Consensus 206 ~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~gr 280 (394)
T 1k0i_A 206 R--GFALCSQRSATRSQYYVQVPLSEKVEDWSDERFWTELKARLPSEVAEKLVTGPSLEK--SIAPLRSF-VVEPMQHGR 280 (394)
T ss_dssp T--CCEEEEEEETTEEEEEEEECTTCCGGGCCHHHHHHHHHHTSCHHHHHHCCCCCEEEE--EEEEEEEE-EEECSEETT
T ss_pred C--ceEEEEecCCCcEEEEEEeCCCCCccccCHHHHHHHHHHhhCcccccccccCcceee--EEEEhhhh-hccccccCC
Confidence 2 234555656667777666543211111222222233321 111 1111211122111 11221111 234677899
Q ss_pred EEEEccCCccCCCCCCcchHHHHHHHHHHHHHHhcccC--CCchHHHHHHHHHHhHHHHHHHHHhccchhh
Q 006778 417 GAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH--EDSNMEIYWDTLQKSWVWQELQRARNYRPAF 485 (631)
Q Consensus 417 v~LiGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~--~~~~l~~Y~~~~~~~~~~~~l~~~r~~~~~~ 485 (631)
++|||||||.++|+.|||+++||+||..||++|...+. ...+|+.|++.++.+ +.+.+..++....++
T Consensus 281 v~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~~~~~L~~Y~~~r~~~-~~~~~~~s~~~~~~~ 350 (394)
T 1k0i_A 281 LFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREGRGELLERYSAICLRR-IWKAERFSWWMTSVL 350 (394)
T ss_dssp EEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHHCCGGGGGGHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred EEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999987642 357899999998865 555555555544444
No 13
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.95 E-value=2.2e-26 Score=262.13 Aligned_cols=353 Identities=16% Similarity=0.139 Sum_probs=202.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHh-----hcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeee
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQ-----LCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVP 180 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~-----~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~ 180 (631)
.++||+||||||+||++|+.|++ . |++|+||||.+.... ...+..+.++++ +++..+..........
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~------Gi~v~viE~~~~~~~-~gra~~l~~~tl-e~l~~lGl~~~l~~~~ 78 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKP------DLKVRIIDKRSTKVY-NGQADGLQCRTL-ESLKNLGLADKILSEA 78 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHST------TCCEEEECSSSSCCC-SCSCCEECHHHH-HHHHTTTCHHHHHTTC
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccC------CCCEEEEeCCCCCCC-CCceeEEChHHH-HHHHHCCCHHHHHHhc
Confidence 36899999999999999999999 8 999999999875432 234556777765 3333322110000000
Q ss_pred ccCcceEeeccC--Ccc----cCC---CCCCCCCcEEEeHHHHHHHHHHHHHhcC---cEEecCceEEEEEEcC------
Q 006778 181 VSSDKFWFLTKD--RAF----SLP---SPFSNRGNYVISLSQLVRWLGGKAEELG---VEIYPGFAASEILYDA------ 242 (631)
Q Consensus 181 ~~~~~~~~l~~~--~~~----~~p---~~~~~~~~~~v~~~~l~~~L~~~a~~~G---v~i~~g~~v~~i~~~~------ 242 (631)
.....+.++... ..+ .++ ........+.+++..+.+.|.+.+++.| ++|.++++++++..++
T Consensus 79 ~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~ 158 (665)
T 1pn0_A 79 NDMSTIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDP 158 (665)
T ss_dssp BCCCEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCT
T ss_pred cccceEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccC
Confidence 111112222111 111 011 1112233577999999999999999887 8999999999998875
Q ss_pred -CCcEEEEEeCCCc-----------cccCCCccccc----------------cCc--eEEEcCEEEEecCCCCchhHHHH
Q 006778 243 -DNKVIGIGTNDMG-----------IAKDGSKKENF----------------QRG--VELRGRITLLAEGCRGSLSEKLI 292 (631)
Q Consensus 243 -~g~v~gV~~~d~g-----------~~~~G~~~~~f----------------~~g--~~i~a~~vV~A~G~~s~~~~~l~ 292 (631)
+..| .|++.+.. ...+|....++ .+| .+++||+||+|||.+|.+|+++
T Consensus 159 ~~~~V-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~l- 236 (665)
T 1pn0_A 159 EAYPV-TMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTL- 236 (665)
T ss_dssp TCCCE-EEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHH-
T ss_pred CCCCE-EEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhc-
Confidence 1233 45443210 00001000000 123 6799999999999999999976
Q ss_pred HHcCCCcccccCCcceeeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEEcCCCC------C
Q 006778 293 KNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYH------N 366 (631)
Q Consensus 293 ~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~~~~~~~~~~G~~~~~~~~~~~~~ig~~~~~d~~------~ 366 (631)
++.. .........++..+....... ........... . .|..+++|.+++.+++.+....... .
T Consensus 237 ---g~~~--~g~~~~~~~~v~d~~~~~~~p-~~~~~~~~~~~---~--~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~ 305 (665)
T 1pn0_A 237 ---GFEM--IGEQTDYIWGVLDAVPASNFP-DIRSRCAIHSA---E--SGSIMIIPRENNLVRFYVQLQARAEKGGRVDR 305 (665)
T ss_dssp ---TCCC--EEEEEEEEEEEEEEEEECCCT-TTTSEEEEECS---S--SCEEEEEECSTTCEEEEEEECC----------
T ss_pred ---CCCC--CCCCccEEEEEEEEEECCCCC-CcceEEEEEeC---C--CceEEEEEcCCCEEEEEEEeCCccccccccCc
Confidence 5542 111111111222221111111 11111111111 1 2556889998887777766543220 1
Q ss_pred CCCCcHHHHHHhhc--CcchhccccCCceeeecceeeccCCcccCCccc-CCCEEEEccCCccCCCCCCcchHHHHHHHH
Q 006778 367 PFLNPYEEFQKFKH--HPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPV-FPGGAIIGCAAGFLNVPKIKGTHTAMKSGM 443 (631)
Q Consensus 367 ~~~~~~~~~~~~~~--~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~-~~~v~LiGDAA~~~~P~~g~G~~~Al~sa~ 443 (631)
...++.+..+.++. .|...++ +.+.+. ..++ .+....++|. .+||+|+|||||.++|+.|||+|+||+||.
T Consensus 306 ~~~t~e~~~~~~~~~~~~~~~~~----~~~~~~-~~~~-~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~ 379 (665)
T 1pn0_A 306 TKFTPEVVIANAKKIFHPYTFDV----QQLDWF-TAYH-IGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTY 379 (665)
T ss_dssp CCCCHHHHHHHHHHHHTTSCCEE----EEEEEE-EEEE-EEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhCcccCce----eeEEEE-Eeee-ccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHH
Confidence 11233333333321 1111010 111110 0111 1112345677 699999999999999999999999999999
Q ss_pred HHHHHHhcccCC---CchHHHHHHHHHHhHHHHHHHHHhccchhhh
Q 006778 444 LAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 486 (631)
Q Consensus 444 ~aA~~l~~~l~~---~~~l~~Y~~~~~~~~~~~~l~~~r~~~~~~~ 486 (631)
.||+.|+..+.. ...|+.|+++|+.. ..+.+...+.+..+|.
T Consensus 380 nLawkLa~vl~g~a~~~lL~tYe~eR~p~-a~~~i~~s~~~~~l~~ 424 (665)
T 1pn0_A 380 NLGWKLGLVLTGRAKRDILKTYEEERQPF-AQALIDFDHQFSRLFS 424 (665)
T ss_dssp HHHHHHHHHHTTCBCGGGGHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence 999999876643 46799999999864 6666666666666664
No 14
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.95 E-value=3.6e-26 Score=246.41 Aligned_cols=335 Identities=17% Similarity=0.192 Sum_probs=191.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCe-EEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLS-VCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~-V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (631)
..+||+||||||+||++|+.|++. |++ |+||||.+.++. ...|..+.+..+.. +..+..............
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~------G~~~v~v~E~~~~~~~-~g~g~~l~~~~~~~-l~~lg~~~~l~~~~~~~~ 74 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQA------GIGKVTLLESSSEIRP-LGVGINIQPAAVEA-LAELGLGPALAATAIPTH 74 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT------TCSEEEEEESSSSCCC-CSCEEEECHHHHHH-HHHTTCHHHHHHHSEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCCCccc-ceeEEEEChHHHHH-HHHCCChHHHHhhCCCcc
Confidence 358999999999999999999999 999 999999887543 23455566655422 222111000000000011
Q ss_pred ceEeeccCCcc--cCCC---CCCCCCcEEEeHHHHHHHHHHHHHh-cC-cEEecCceEEEEEEcCCCcEEEEEeCCCccc
Q 006778 185 KFWFLTKDRAF--SLPS---PFSNRGNYVISLSQLVRWLGGKAEE-LG-VEIYPGFAASEILYDADNKVIGIGTNDMGIA 257 (631)
Q Consensus 185 ~~~~l~~~~~~--~~p~---~~~~~~~~~v~~~~l~~~L~~~a~~-~G-v~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~ 257 (631)
.+.+....... ..+. .......+.++|..|.+.|.+.+.+ .| ++|+++++|+++.. +++ | .|.+.+ .
T Consensus 75 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~-v-~v~~~~---~ 148 (410)
T 3c96_A 75 ELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG-R-VLIGAR---D 148 (410)
T ss_dssp EEEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT-E-EEEEEE---E
T ss_pred eEEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc-c-EEEEec---C
Confidence 12222111100 0000 0011225789999999999999987 46 58999999999988 544 4 355432 0
Q ss_pred cCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCcceeeE-EEEEEeecCCCCCCCcEEEEeccCC
Q 006778 258 KDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALG-IKEVWEIDEGKHNPGEILHTLGWPL 336 (631)
Q Consensus 258 ~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~g~~~h~~~~~~ 336 (631)
.+|+ ..+++||+||+|||.+|.+|+.+ +... ..+...+.. +..+...+ ....+.....++..
T Consensus 149 ~~g~-------~~~~~ad~vV~AdG~~S~vR~~l----~~~~---~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~- 211 (410)
T 3c96_A 149 GHGK-------PQALGADVLVGADGIHSAVRAHL----HPDQ---RPLSHGGITMWRGVTEFD--RFLDGKTMIVANDE- 211 (410)
T ss_dssp TTSC-------EEEEEESEEEECCCTTCHHHHHH----CTTC---CCCEEEEEEEEEEEEEES--CCTTSSEEEEEECT-
T ss_pred CCCC-------ceEEecCEEEECCCccchhHHHh----cCCC---CCCCcCCeeEEEeecccc--cccCCCeEEEecCC-
Confidence 1122 15799999999999999999876 2221 111111211 11222222 12234333334321
Q ss_pred CCCCcceEEEEEeCC-----CeEEEEEEEcCC--------CCCCC---CCcHHHHHHhhcC-c---chhccccCCceeee
Q 006778 337 DQKTYGGSFLYHMND-----RQIALGLVVALN--------YHNPF---LNPYEEFQKFKHH-P---AIKPLLEGGTVVQY 396 (631)
Q Consensus 337 ~~~~~G~~~~~~~~~-----~~~~ig~~~~~d--------~~~~~---~~~~~~~~~~~~~-p---~i~~~l~~~~~~~~ 396 (631)
. .+..++||..+ +...+.++.... ....+ ....+..+.+... + .+.++++....+.
T Consensus 212 -~--~~~~~~~p~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~- 287 (410)
T 3c96_A 212 -H--WSRLVAYPISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRNQLIL- 287 (410)
T ss_dssp -T--CCEEEEEECCHHHHTTTCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHHHHTCSEEE-
T ss_pred -C--CcEEEEEecCCcccCCCCcEEEEEEEecCcccccCCCccccCCCCCHHHHHHHhcCCCCchhHHHHHHhcCcccc-
Confidence 1 13467888753 444444433210 01111 1222233334321 1 2334444332221
Q ss_pred cceeeccCCcccCCcccCCCEEEEccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHhHHHHHHH
Q 006778 397 GARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKSWVWQELQ 476 (631)
Q Consensus 397 ~~~~i~~gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~~~~l~~Y~~~~~~~~~~~~l~ 476 (631)
. .+.......++|..+|++|||||||.++|+.|||+++||+||..||++|...-....+|.+|++.|+.. ..+.+.
T Consensus 288 ~---~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~L~~Ye~~r~~~-~~~~~~ 363 (410)
T 3c96_A 288 Q---YPMVDRDPLPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARNADVAAALREYEEARRPT-ANKIIL 363 (410)
T ss_dssp E---EEEEECCCCSCCCBTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHH-HHHHHH
T ss_pred e---eecccCCCccccccCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH-HHHHHH
Confidence 1 111111235688889999999999999999999999999999999999987422246799999999864 554444
Q ss_pred HHh
Q 006778 477 RAR 479 (631)
Q Consensus 477 ~~r 479 (631)
.++
T Consensus 364 ~s~ 366 (410)
T 3c96_A 364 ANR 366 (410)
T ss_dssp HHH
T ss_pred HhH
Confidence 444
No 15
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.95 E-value=2.9e-26 Score=255.78 Aligned_cols=331 Identities=18% Similarity=0.120 Sum_probs=194.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhh------hhcCCCeee
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQW------KQEEAPIRV 179 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~------~~~~~~~~~ 179 (631)
+++||+||||||+||++|+.|++. |++|+||||.+..+.. ..+..+.++.+. ++..+ .....+...
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~------G~~v~viEr~~~~~~~-~~~~~l~~~~~~-~l~~lGl~~~~~~~~~~~~~ 75 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQ------GVRVLVVERRPGLSPY-PRAAGQNPRTME-LLRIGGVADEVVRADDIRGT 75 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT------TCCEEEECSSSSCCCC-CCSCCBCHHHHH-HHHHTTCHHHHHHSCCSSCT
T ss_pred ccCcEEEECcCHHHHHHHHHHHHC------CCCEEEEeCCCCCCCC-CccceECHHHHH-HHHHcCCHHHHHhhCCCccc
Confidence 468999999999999999999999 9999999999876432 346667776653 22222 111111110
Q ss_pred e----------ccCcceEeeccCCcccC---C-CCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCC-
Q 006778 180 P----------VSSDKFWFLTKDRAFSL---P-SPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADN- 244 (631)
Q Consensus 180 ~----------~~~~~~~~l~~~~~~~~---p-~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g- 244 (631)
. .....+..+.. .+.. . ........+.+++..|.+.|.+.+++.|++|+++++|+++..++++
T Consensus 76 ~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~ 153 (535)
T 3ihg_A 76 QGDFVIRLAESVRGEILRTVSE--SFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDA 153 (535)
T ss_dssp TSCCEEEEESSSSSCEEEEEES--CHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGG
T ss_pred ccceeeeEEeccCCceeeeccc--cccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCc
Confidence 0 00111110000 0000 0 0011223567899999999999999999999999999999988752
Q ss_pred --cEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCcceeeEEEEEEeecCCC
Q 006778 245 --KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGK 322 (631)
Q Consensus 245 --~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~ 322 (631)
.| .|++.+ .+| ..+++||+||+|||.+|.+++++ |+... .. ......+...+..+...
T Consensus 154 ~~~v-~v~~~~----~~~--------~~~i~a~~vV~AdG~~S~vR~~l----gi~~~--~~-~~~~~~~~~~~~~~~~~ 213 (535)
T 3ihg_A 154 GAGV-TARLAG----PDG--------EYDLRAGYLVGADGNRSLVRESL----GIGRY--GH-GTLTHMVGVIFDADLSG 213 (535)
T ss_dssp CSEE-EEEEEE----TTE--------EEEEEEEEEEECCCTTCHHHHHT----TCCEE--EE-EEEEEEEEEEEECCGGG
T ss_pred cccE-EEEEEc----CCC--------eEEEEeCEEEECCCCcchHHHHc----CCCcC--CC-CccceEEEEEEeccChh
Confidence 23 355443 111 26899999999999999888854 66531 11 11111111112221111
Q ss_pred C--CCCcEEEEeccCCCCCCcceEEEEEeCC-CeEEEEEEEcCCCCC--CCCCcHHHHHHhhc---CcchhccccCCcee
Q 006778 323 H--NPGEILHTLGWPLDQKTYGGSFLYHMND-RQIALGLVVALNYHN--PFLNPYEEFQKFKH---HPAIKPLLEGGTVV 394 (631)
Q Consensus 323 ~--~~g~~~h~~~~~~~~~~~G~~~~~~~~~-~~~~ig~~~~~d~~~--~~~~~~~~~~~~~~---~p~i~~~l~~~~~~ 394 (631)
. ......+++ .... +..+++|..+ +...+.+....+... +...+.+..+.++. .+... .+..
T Consensus 214 ~~~~~~~~~~~~---~~p~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~-----~~~~ 283 (535)
T 3ihg_A 214 IMEPGTTGWYYL---HHPE--FKGTFGPTDRPDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVK-----PELV 283 (535)
T ss_dssp TSCTTCCEEEEE---ECSS--CEEEEEECSSTTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCC-----CEEE
T ss_pred hccCCceEEEEE---ECCC--ceEEEEEecCCCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCc-----eeEE
Confidence 1 111122222 1122 3467788875 555555544433211 11222222222221 11110 0111
Q ss_pred eecceeeccCCcccCCcccCCCEEEEccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCC---CchHHHHHHHHHHhHH
Q 006778 395 QYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWV 471 (631)
Q Consensus 395 ~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~---~~~l~~Y~~~~~~~~~ 471 (631)
.... ++. .....++|..+|++|+|||||.++|+.|||+|+||+||..||+.|...+.. ...|+.|+++|+.. .
T Consensus 284 ~~~~--~~~-~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~~~~~lL~~Ye~eR~p~-a 359 (535)
T 3ihg_A 284 DIQG--WEM-AARIAERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQAGAGLLDTYEDERKVA-A 359 (535)
T ss_dssp EEEE--EEE-EEEEESCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHHHHHH-H
T ss_pred EeeE--eee-eEEEECccccCCEEEEecccccCCCccCCccccccccHHHHHHHHHHHhcCCCcHHHHHhhHHHHHHH-H
Confidence 1110 111 111235778899999999999999999999999999999999999987643 57799999999974 5
Q ss_pred HHHHHHHhc
Q 006778 472 WQELQRARN 480 (631)
Q Consensus 472 ~~~l~~~r~ 480 (631)
.+.+..++.
T Consensus 360 ~~~~~~s~~ 368 (535)
T 3ihg_A 360 ELVVAEALA 368 (535)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555443
No 16
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.95 E-value=3.4e-27 Score=253.33 Aligned_cols=332 Identities=15% Similarity=0.087 Sum_probs=202.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHH-----hhhhhhcCCCeeeec
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNEL-----LPQWKQEEAPIRVPV 181 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l-----~~~~~~~~~~~~~~~ 181 (631)
++||+|||||++||++|+.|++. |++|+||||.+... ....+..+.+..+..+ .+.+.....+.
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~------G~~V~viE~~~~~~-~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~---- 74 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQ------GHRVVVVEQARRER-AINGADLLKPAGIRVVEAAGLLAEVTRRGGRV---- 74 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSCCC----CCCCEECHHHHHHHHHTTCHHHHHHTTCEE----
T ss_pred cCCEEEECcCHHHHHHHHHHHhC------CCcEEEEeCCCCCC-ccCceeeECchHHHHHHHcCcHHHHHHhCCCc----
Confidence 58999999999999999999999 99999999987652 2234556666544221 11111111111
Q ss_pred cCcceEeeccCC----cccCCCCCCCCCcEEEeHHHHHHHHHHHHHhc-CcEEecCceEEEEEEcCCCcEE-EEEeCCCc
Q 006778 182 SSDKFWFLTKDR----AFSLPSPFSNRGNYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVI-GIGTNDMG 255 (631)
Q Consensus 182 ~~~~~~~l~~~~----~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~-Gv~i~~g~~v~~i~~~~~g~v~-gV~~~d~g 255 (631)
..+.+..... .+...........+.+++..|.+.|.+.+++. |++|+++++|+++..++++ ++ .|++.+
T Consensus 75 --~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~-v~g~v~~~~-- 149 (399)
T 2x3n_A 75 --RHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERH-AIDQVRLND-- 149 (399)
T ss_dssp --ECEEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTS-CEEEEEETT--
T ss_pred --ceeEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCc-eEEEEEECC--
Confidence 1111111111 01111000111257899999999999999998 9999999999999887754 42 466665
Q ss_pred cccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCccee---eEEEEEEeecCCCCCCCcEEEEe
Q 006778 256 IAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYA---LGIKEVWEIDEGKHNPGEILHTL 332 (631)
Q Consensus 256 ~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~g~~~h~~ 332 (631)
|.+++||+||+|||.+|.+++.+ ++... ...| .++ .++...+..+ . +... ..+
T Consensus 150 -------------g~~~~ad~vV~AdG~~s~vr~~l----g~~~~-~~~p-~~~~~~~~~~~~~~~~--~--~~~~-~~~ 205 (399)
T 2x3n_A 150 -------------GRVLRPRVVVGADGIASYVRRRL----LDIDV-ERRP-YPSPMLVGTFALAPCV--A--ERNR-LYV 205 (399)
T ss_dssp -------------SCEEEEEEEEECCCTTCHHHHHT----SCCCC-CCCC-CSSCEEEEEEECCHHH--H--HCEE-EEE
T ss_pred -------------CCEEECCEEEECCCCChHHHHHh----CCCcc-ccCC-CCCCceEEEEEEecCC--C--CCcc-EEE
Confidence 66899999999999999988754 55421 1100 122 2332222211 0 1112 222
Q ss_pred ccCCCCCCcceEEEEEeCCCeEEEEEEEcCCCCCC---CCCcHHHHHHhhc-Ccchh-ccccCCceeeecceeeccCCcc
Q 006778 333 GWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNP---FLNPYEEFQKFKH-HPAIK-PLLEGGTVVQYGARTLNEGGLQ 407 (631)
Q Consensus 333 ~~~~~~~~~G~~~~~~~~~~~~~ig~~~~~d~~~~---~~~~~~~~~~~~~-~p~i~-~~l~~~~~~~~~~~~i~~gg~~ 407 (631)
+ ..+ |..|++|.+++.+.+.+....+.... ...+.+..+.++. .+.+. ..++...... ...++.....
T Consensus 206 ~---~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 278 (399)
T 2x3n_A 206 D---SQG--GLAYFYPIGFDRARLVVSFPREEARELMADTRGESLRRRLQRFVGDESAEAIAAVTGTS--RFKGIPIGYL 278 (399)
T ss_dssp C---TTS--CEEEEEEETTTEEEEEEECCHHHHHHHHHSTTSHHHHHHHHTTCCGGGHHHHHTCCCST--TCEECCCCCE
T ss_pred c---CCC--cEEEEEEcCCCEEEEEEEeCccccccccccCCHHHHHHHHhhcCCcchhhHHhcCCccc--eEEechhhcc
Confidence 1 102 45788999886666655332210000 0122233333332 23331 2222111000 0112222212
Q ss_pred cCCcccCCCEEEEccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCC----CchHHHHHHHHHHhHHHHHHHHHhccch
Q 006778 408 SIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYRP 483 (631)
Q Consensus 408 ~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~----~~~l~~Y~~~~~~~~~~~~l~~~r~~~~ 483 (631)
..++|..+|++|||||||.++|+.|||+++||+||..||++|.+.+.. ..+|+.|++.|+.. ..+.+..++.+..
T Consensus 279 ~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~~~~~l~~Y~~~r~~~-~~~~~~~s~~~~~ 357 (399)
T 2x3n_A 279 NLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPV-NQAIVSYGHALAT 357 (399)
T ss_dssp ECSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred cccccccCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHhccH-HHHHHHHHHHhhh
Confidence 456788899999999999999999999999999999999999887642 36789999999875 7777778777777
Q ss_pred hhh
Q 006778 484 AFE 486 (631)
Q Consensus 484 ~~~ 486 (631)
+|.
T Consensus 358 ~~~ 360 (399)
T 2x3n_A 358 SLE 360 (399)
T ss_dssp HTT
T ss_pred hhc
Confidence 774
No 17
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.95 E-value=7.7e-27 Score=261.77 Aligned_cols=325 Identities=18% Similarity=0.210 Sum_probs=200.7
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhh------hcCCCee
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWK------QEEAPIR 178 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~------~~~~~~~ 178 (631)
++++||||||||+||+++|+.|++. |++|+|||+.+..+.. .|..+.+.... ++..+. .......
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~------G~~V~LiEr~~~~~~~--~G~~l~p~~~~-~l~~lGl~~~l~~~~~~~~ 91 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKL------GHDVTIYERSAFPRYR--VGESLLPGTMS-ILNRLGLQEKIDAQNYVKK 91 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCSSCCC--CCCBCCHHHHH-HHHHTTCHHHHHHHCCEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcC------CCCEEEEcCCCCCCCc--eeeeECHHHHH-HHHHcCCcHHHHhcCCccc
Confidence 4479999999999999999999999 9999999998654432 35555555432 222221 1111100
Q ss_pred eeccCcceEeeccCC--cccCCC----CCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeC
Q 006778 179 VPVSSDKFWFLTKDR--AFSLPS----PFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTN 252 (631)
Q Consensus 179 ~~~~~~~~~~l~~~~--~~~~p~----~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~ 252 (631)
....+.+..... .+.+.. .......+.+++..+.+.|.+.+++.|++++++++|+++..++ +.+++|.+.
T Consensus 92 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~-g~~~~V~~~ 167 (591)
T 3i3l_A 92 ---PSATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSD-PDRVVLTVR 167 (591)
T ss_dssp ---CEEEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCS-TTCEEEEEE
T ss_pred ---CCcEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCEEEEEEe
Confidence 000000000000 011111 1122346889999999999999999999999999999998764 445577775
Q ss_pred CCccccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCcceeeEEEEEEeecCC--CCCCCcEEE
Q 006778 253 DMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEG--KHNPGEILH 330 (631)
Q Consensus 253 d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~g~~~h 330 (631)
+ +|+ ..+++||+||+|+|.+|.+++++ ++.. ........++...+..... ....+....
T Consensus 168 ~-----~G~-------~~~i~AdlVV~AdG~~S~lr~~l----g~~~---~~~~~~~~av~~~~~~~~~~~~~~~~~~~~ 228 (591)
T 3i3l_A 168 R-----GGE-------SVTVESDFVIDAGGSGGPISRKL----GVRQ---YDEFYRNFAVWSYFKLKDPFEGDLKGTTYS 228 (591)
T ss_dssp E-----TTE-------EEEEEESEEEECCGGGCHHHHHH----TCEE---EEEEEEEEEEEEEEECCCSCCSTTTTCEEE
T ss_pred c-----CCc-------eEEEEcCEEEECCCCcchhHHHc----CCCC---CCccccceEEEEEEecCccccCCCCCceEE
Confidence 2 111 16899999999999999888764 5542 1111112222222222111 112222322
Q ss_pred EeccCCCCCCcceEEEEEeCCCeEEEEEEEcCCCCCC--CCCcHHHHHHh-hcCcchhccccCCceeeecceeeccCCcc
Q 006778 331 TLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNP--FLNPYEEFQKF-KHHPAIKPLLEGGTVVQYGARTLNEGGLQ 407 (631)
Q Consensus 331 ~~~~~~~~~~~G~~~~~~~~~~~~~ig~~~~~d~~~~--~~~~~~~~~~~-~~~p~i~~~l~~~~~~~~~~~~i~~gg~~ 407 (631)
.+. . .|..|++|..++.+++++....+.... ...+.+.++.+ ...|.+.+.+.....+.. .+.++....
T Consensus 229 ~~~----~--~G~~w~iPl~~~~~sv~~~~~~~~~~~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~~-~~~~~~~~~- 300 (591)
T 3i3l_A 229 ITF----E--DGWVWMIPIKDDLYSVGLVVDRSKSAEVREQGADAFYSSTLAKCAKAMDILGGAEQVDE-VRIVQDWSY- 300 (591)
T ss_dssp EEE----T--TEEEEEEECSSSEEEEEEEEEGGGHHHHHHHCHHHHHHHHHTTCHHHHHHHTTCEECSC-CEEEEEEEE-
T ss_pred EEc----C--CcEEEEEECCCCeEEEEEEcCHHHHhhhccCCHHHHHHHHHHhCHHHHHHHhcCccccC-ceEeccccc-
Confidence 221 1 255789999999999998875432110 01122333333 345666666665443321 111211111
Q ss_pred cCCcccCCCEEEEccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCCC----chHHHHHHHHHHh
Q 006778 408 SIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHED----SNMEIYWDTLQKS 469 (631)
Q Consensus 408 ~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~~----~~l~~Y~~~~~~~ 469 (631)
..+++..+|+++||||||+++|+.|+|+++|++||..||++|.+.+... .++..|++.++..
T Consensus 301 ~~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~~~~~~~~al~~Y~~~~~~~ 366 (591)
T 3i3l_A 301 DTEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRHGDEKDAVHAWYNRTYREA 366 (591)
T ss_dssp EESCSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHH
T ss_pred chhhcccCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 2347778999999999999999999999999999999999998876442 3578899888865
No 18
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.95 E-value=1.5e-26 Score=248.44 Aligned_cols=335 Identities=13% Similarity=0.111 Sum_probs=179.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccc-cccccChHhHH---HHh--hhhhhcCCCeee--
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII-SGNVFEPRALN---ELL--PQWKQEEAPIRV-- 179 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~-~g~~i~~~~l~---~l~--~~~~~~~~~~~~-- 179 (631)
.+|+||||||+||++|+.|++. |++|+|+||.+.+..... .+..+.+.++. ++. ..+.........
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~------G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~ 75 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH------GIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIG 75 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccC
Confidence 4799999999999999999999 999999999876543211 22345555442 221 111110000000
Q ss_pred ---eccCcceEeeccCCcc-cCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCc
Q 006778 180 ---PVSSDKFWFLTKDRAF-SLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMG 255 (631)
Q Consensus 180 ---~~~~~~~~~l~~~~~~-~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g 255 (631)
.........+...... ...........+.++|..|.+.|.+.+ +.+|++++++++++..+++.| .|++.|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~---~~~v~~~~~v~~~~~~~~~~v-~v~~~d-- 149 (412)
T 4hb9_A 76 GQSRFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL---ANTIQWNKTFVRYEHIENGGI-KIFFAD-- 149 (412)
T ss_dssp CCCEEECTTSCEEEC--------------CEEEEEHHHHHHHHHTTC---TTTEECSCCEEEEEECTTSCE-EEEETT--
T ss_pred cceeEecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhc---cceEEEEEEEEeeeEcCCCeE-EEEECC--
Confidence 0000011111100000 000111122356789999999887643 457899999999998777665 577776
Q ss_pred cccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCcceeeE-EEEEEeecC-------CCCCCCc
Q 006778 256 IAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALG-IKEVWEIDE-------GKHNPGE 327 (631)
Q Consensus 256 ~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~~g-~~~~~~~~~-------~~~~~g~ 327 (631)
|.+++||+||+|||.+|.+|+++. ... .+..++.. +........ .....+.
T Consensus 150 -------------G~~~~adlvVgADG~~S~vR~~l~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (412)
T 4hb9_A 150 -------------GSHENVDVLVGADGSNSKVRKQYL----PFI----ERFDVGVSMIIGRARLTPALTALLPQNFRDGT 208 (412)
T ss_dssp -------------SCEEEESEEEECCCTTCHHHHHHS----TTC----CCEEEEEEEEEEEEECCHHHHHHSCGGGTSSC
T ss_pred -------------CCEEEeeEEEECCCCCcchHHHhC----CCc----cccccceeEEEEEEecchhhhcchhhhhccCC
Confidence 789999999999999999999872 221 11111111 111111111 0111111
Q ss_pred EEEEeccCCCCCC-cceEEEEEe--------C--CCeEEEEEEEcCC-CCCC--CCCcHHHHH----Hhh-cCcchhccc
Q 006778 328 ILHTLGWPLDQKT-YGGSFLYHM--------N--DRQIALGLVVALN-YHNP--FLNPYEEFQ----KFK-HHPAIKPLL 388 (631)
Q Consensus 328 ~~h~~~~~~~~~~-~G~~~~~~~--------~--~~~~~ig~~~~~d-~~~~--~~~~~~~~~----~~~-~~p~i~~~l 388 (631)
.... .|..... +-..|..+. . ++...+.+....+ .... ........+ .+. .+|.+.+++
T Consensus 209 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li 286 (412)
T 4hb9_A 209 PNSI--VPKSPDWLFISMWRAPVNIHVEASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTLV 286 (412)
T ss_dssp CEEE--CCSSSEEEEEEEEEEESCTTSCGGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred cceE--eecCCCcceeeeeecCCceeEEEeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHHHH
Confidence 1111 1111100 000011110 1 1111111221111 1111 111111112 222 256666666
Q ss_pred cCCceeeecceeeccCCcccCCcccCCCEEEEccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCC----CchHHHHHH
Q 006778 389 EGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWD 464 (631)
Q Consensus 389 ~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~----~~~l~~Y~~ 464 (631)
+........ .+........++|..+|++|||||||.++|+.|||+|+||+||..||++|...... ..+|+.||+
T Consensus 287 ~~~~~~~~~--~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~~~~aL~~Ye~ 364 (412)
T 4hb9_A 287 QQSDMENIS--PLHLRSMPHLLPWKSSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHEELVKAISDYEQ 364 (412)
T ss_dssp HTSCTTCCE--EEEEEECCCCCCCCCCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred Hhcccceec--cchhccccccccccccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHH
Confidence 533221110 01111122445788899999999999999999999999999999999999887654 356999999
Q ss_pred HHHHhHHHHHHHHHhc
Q 006778 465 TLQKSWVWQELQRARN 480 (631)
Q Consensus 465 ~~~~~~~~~~l~~~r~ 480 (631)
+|+.. ..+.+..++.
T Consensus 365 ~R~~~-~~~~~~~s~~ 379 (412)
T 4hb9_A 365 QMRAY-ANEIVGISLR 379 (412)
T ss_dssp HHHHH-HHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHH
Confidence 99864 5555555543
No 19
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.95 E-value=1e-25 Score=256.13 Aligned_cols=346 Identities=14% Similarity=0.146 Sum_probs=197.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHh-hcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQ-LCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~-~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (631)
.++||+||||||+||++|+.|++ . |++|+||||.+..+. ...+..+.++++. ++..+..............
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~------G~~V~viEr~~~~~~-~g~a~~l~~~t~e-~l~~lGl~~~~~~~~~~~~ 102 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFP------DIRTCIVEQKEGPME-LGQADGIACRTME-MFEAFEFADSILKEACWIN 102 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCT------TSCEEEECSSSSCCS-SCSCCEECHHHHH-HHHHTTCHHHHHHHSEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhC------CCCEEEEeCCCCCCC-CCceeeeCHHHHH-HHHHcCcHHHHHHhccccc
Confidence 46899999999999999999999 9 999999999886543 2345667776653 3322211100000000001
Q ss_pred ceEeecc----CCcc----cCC---CCCCCCCcEEEeHHHHHHHHHHHHHhcCc--EEecCceEEEEEEcCC--CcEEEE
Q 006778 185 KFWFLTK----DRAF----SLP---SPFSNRGNYVISLSQLVRWLGGKAEELGV--EIYPGFAASEILYDAD--NKVIGI 249 (631)
Q Consensus 185 ~~~~l~~----~~~~----~~p---~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv--~i~~g~~v~~i~~~~~--g~v~gV 249 (631)
.+.++.. ...+ .++ ........+.+++..+.+.|.+.+++.|+ +|+++++|+++..+++ +..+.|
T Consensus 103 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v 182 (639)
T 2dkh_A 103 DVTFWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTV 182 (639)
T ss_dssp EEEEEEECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEE
T ss_pred ceEEECCCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEE
Confidence 1111110 0111 011 01112235678999999999999999987 9999999999998763 222245
Q ss_pred EeCCCccccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCcceeeEEEEEEeecCCCCCCCcEE
Q 006778 250 GTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEIL 329 (631)
Q Consensus 250 ~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~ 329 (631)
++.+.+...+|+ ..+++||+||+|||.+|.+|+.+ ++..........+ ++..+......... ....
T Consensus 183 ~~~~~~~~~~G~-------~~~i~a~~vVgADG~~S~vR~~l----g~~~~g~~~~~~~--~~~~~~~~~~~p~~-~~~~ 248 (639)
T 2dkh_A 183 TLERCDAAHAGQ-------IETVQARYVVGCDGARSNVRRAI----GRQLVGDSANQAW--GVMDVLAVTDFPDV-RYKV 248 (639)
T ss_dssp EEEECSGGGTTC-------EEEEEEEEEEECCCTTCHHHHHT----TCCCEECSCSCCE--EEEEEEEEECCTTT-TSEE
T ss_pred EEEeccccCCCC-------eEEEEeCEEEECCCcchHHHHHh----CCCCCCCCccceE--EEEEEEEccCCCcc-ceeE
Confidence 544210001232 26899999999999999998865 5543111111222 33222111110011 1111
Q ss_pred EEeccCCCCCCcceEEEEEeCCC-eEEEEEEEcC--CC---CCCCCCcHHHHHHhhc--CcchhccccCCceeeecceee
Q 006778 330 HTLGWPLDQKTYGGSFLYHMNDR-QIALGLVVAL--NY---HNPFLNPYEEFQKFKH--HPAIKPLLEGGTVVQYGARTL 401 (631)
Q Consensus 330 h~~~~~~~~~~~G~~~~~~~~~~-~~~ig~~~~~--d~---~~~~~~~~~~~~~~~~--~p~i~~~l~~~~~~~~~~~~i 401 (631)
... . . .|..+++|.+++ .+.+.+.... +. .....++.+..+.++. .|...++ ..+.+. ..+
T Consensus 249 ~~~-~---~--~g~~~~~P~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~----~~~~~~-~~~ 317 (639)
T 2dkh_A 249 AIQ-S---E--QGNVLIIPREGGHLVRFYVEMDKLDADERVASRNITVEQLIATAQRVLHPYKLEV----KNVPWW-SVY 317 (639)
T ss_dssp EEE-E---T--TEEEEEEECTTSSCEEEEEECC-----------CCCHHHHHHHHHHHHTTSCEEE----EEEEEE-EEE
T ss_pred EEE-c---C--CceEEEEEcCCCcEEEEEEECCCcCcccccccCCCCHHHHHHHHHHHhCcccCcc----eeeeEE-Eec
Confidence 111 1 1 255688998887 6666655432 11 1111233322233221 1110000 111110 011
Q ss_pred ccCCcccCCccc------------CCCEEEEccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCC---CchHHHHHHHH
Q 006778 402 NEGGLQSIPYPV------------FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTL 466 (631)
Q Consensus 402 ~~gg~~~~p~~~------------~~~v~LiGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~---~~~l~~Y~~~~ 466 (631)
+. +....++|. .+||+|+|||||.++|+.|||+|+||+||..||+.|+..+.. ...|+.|+++|
T Consensus 318 ~~-~~~~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~a~~~lL~~Ye~eR 396 (639)
T 2dkh_A 318 EI-GQRICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQCAPELLHTYSSER 396 (639)
T ss_dssp CC-CCEECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTSBCGGGGHHHHHHH
T ss_pred cc-ccchhhhhhccccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 10 111122333 789999999999999999999999999999999999876644 46799999999
Q ss_pred HHhHHHHHHHHHhccchhhh
Q 006778 467 QKSWVWQELQRARNYRPAFE 486 (631)
Q Consensus 467 ~~~~~~~~l~~~r~~~~~~~ 486 (631)
+.. ..+.+..++.+..+|.
T Consensus 397 ~~~-a~~~~~~s~~~~~~~~ 415 (639)
T 2dkh_A 397 QVV-AQQLIDFDREWAKMFS 415 (639)
T ss_dssp HHH-HHHHHHHHHHSCC---
T ss_pred HHH-HHHHHHHHHHHHHHhc
Confidence 974 6667777777777764
No 20
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.94 E-value=5.5e-26 Score=243.91 Aligned_cols=326 Identities=13% Similarity=0.100 Sum_probs=187.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
+.+||+||||||+||++|+.|++. |++|+|+||.+........|..+.+..+ +++..+.... .........
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~------G~~v~v~E~~~~~~~~~~~g~~l~~~~~-~~l~~~g~~~--~~~~~~~~~ 74 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA------GVDVDVYERSPQPLSGFGTGIVVQPELV-HYLLEQGVEL--DSISVPSSS 74 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCCCCSCEEECCHHHH-HHHHHTTCCG--GGTCBCCCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC------CCCEEEEecCCCCCCccccccccChhHH-HHHHHcCCcc--ccccccccc
Confidence 358999999999999999999999 9999999998764222223445666554 3333333211 111111222
Q ss_pred eEeecc-CCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccc
Q 006778 186 FWFLTK-DRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (631)
Q Consensus 186 ~~~l~~-~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~ 264 (631)
+.+... ........ ......+.+..+.+.|.+.+ .|++|+++++|+++..++++ + .|++.+
T Consensus 75 ~~~~~~~~g~~~~~~---~~~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~-v-~v~~~~----------- 136 (397)
T 2vou_A 75 MEYVDALTGERVGSV---PADWRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDSET-V-QMRFSD----------- 136 (397)
T ss_dssp EEEEETTTCCEEEEE---ECCCCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECSSC-E-EEEETT-----------
T ss_pred eEEEecCCCCccccc---cCcccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecCCE-E-EEEECC-----------
Confidence 223222 11110000 00123477889999888776 48999999999999887754 4 477765
Q ss_pred cccCceEEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCccee-eEEEEEEeecCCCCCCC------cEEEEeccCCC
Q 006778 265 NFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYA-LGIKEVWEIDEGKHNPG------EILHTLGWPLD 337 (631)
Q Consensus 265 ~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g------~~~h~~~~~~~ 337 (631)
|.+++||+||+|||.+|.+|+.+. .+ . +...+ ..+... ++.....+. ...+.+..
T Consensus 137 ----g~~~~ad~vV~AdG~~S~vr~~~~-~~--~------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--- 198 (397)
T 2vou_A 137 ----GTKAEANWVIGADGGASVVRKRLL-GI--E------PTYAGYVTWRGV--LQPGEVADDVWNYFNDKFTYGLL--- 198 (397)
T ss_dssp ----SCEEEESEEEECCCTTCHHHHHHH-CC--C------CEEEEEEEEEEE--ECTTSSCHHHHHHHTTEEEEEEE---
T ss_pred ----CCEEECCEEEECCCcchhHHHHhc-cC--C------CCccceEEEEEE--eeccccChhhhhhhcCceeEEec---
Confidence 678999999999999999999874 22 1 11111 122222 221111110 01111111
Q ss_pred CCCcceEEEEEeCCC------eEEEEEEEcCCC--------CCC----C-------CCcHHHHH----Hhh-c-Ccchhc
Q 006778 338 QKTYGGSFLYHMNDR------QIALGLVVALNY--------HNP----F-------LNPYEEFQ----KFK-H-HPAIKP 386 (631)
Q Consensus 338 ~~~~G~~~~~~~~~~------~~~ig~~~~~d~--------~~~----~-------~~~~~~~~----~~~-~-~p~i~~ 386 (631)
.+ +...+||..++ ...+.+...... .+. + ....+.++ .+. . .| +.+
T Consensus 199 ~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 275 (397)
T 2vou_A 199 DD--GHLIAYPIPGRENAESPRLNFQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKP-FRD 275 (397)
T ss_dssp TT--EEEEEEEECCSSTTSCCEEEEEEEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHH-HHH
T ss_pred CC--CEEEEEECCCCCCccceeEEEEEEecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChH-HHH
Confidence 11 12345665532 444444433211 000 0 00112222 221 1 23 444
Q ss_pred cccCCceeeecceeeccCCcccCCcccCCCEEEEccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCCCchHHHHHHHH
Q 006778 387 LLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTL 466 (631)
Q Consensus 387 ~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~~~~l~~Y~~~~ 466 (631)
+++..... + ..+.... ..++|..+|++|||||||.++|+.|||+|+||+||..||++|........+|+.|++.|
T Consensus 276 ~~~~~~~~-~---~~~~~~~-~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~L~~Ye~~R 350 (397)
T 2vou_A 276 LVLNASSP-F---VTVVADA-TVDRMVHGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTKNHDLRGSLQSWETRQ 350 (397)
T ss_dssp HHHHCSSC-E---EEEEEEB-CCSCSEETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHH
T ss_pred HHhccCCc-c---eeeeeee-cCCceecCcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 44322110 0 0111111 34678889999999999999999999999999999999999975322246799999988
Q ss_pred HHhHHHHHHHHHhccchhh
Q 006778 467 QKSWVWQELQRARNYRPAF 485 (631)
Q Consensus 467 ~~~~~~~~l~~~r~~~~~~ 485 (631)
+.. ..+.+..++.....+
T Consensus 351 ~~~-~~~~~~~s~~~~~~~ 368 (397)
T 2vou_A 351 LQQ-GHAYLNKVKKMASRL 368 (397)
T ss_dssp HHH-HHHHHHHHHHHHHHH
T ss_pred HHH-HHHHHHHHHHHHHHH
Confidence 864 555555555444443
No 21
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.93 E-value=2.8e-25 Score=238.54 Aligned_cols=316 Identities=16% Similarity=0.123 Sum_probs=182.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCcccccccc--Ch----HhHHHH--hhhhhhcCCCe
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVF--EP----RALNEL--LPQWKQEEAPI 177 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i--~~----~~l~~l--~~~~~~~~~~~ 177 (631)
+++||+||||||+||++|+.|++. |++|+||||.+.++... .|..+ .+ +.|.++ .+.+.....+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~------G~~v~v~E~~~~~~~~~-~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~ 97 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQN------GIDVSVYERDNDREARI-FGGTLDLHKGSGQEAMKKAGLLQTYYDLALPM 97 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT------TCEEEEEECSSSTTCCC-CSCCEECCTTTHHHHHHHTTCHHHHHHHCBCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCCCccccc-cCCeeeeCCccHHHHHHhcChHHHHHHhhccc
Confidence 468999999999999999999999 99999999987654321 23222 22 122221 12222211111
Q ss_pred eeeccCcceEeeccCCcc--cC--CCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCC
Q 006778 178 RVPVSSDKFWFLTKDRAF--SL--PSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTND 253 (631)
Q Consensus 178 ~~~~~~~~~~~l~~~~~~--~~--p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d 253 (631)
.. .+....... .. +. ........++|..|.+.|.+.+.+ ++|+++++|+++..++++ + .|++.+
T Consensus 98 ~~-------~~~~~~g~~~~~~~~~~-~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~-v-~v~~~~ 165 (398)
T 2xdo_A 98 GV-------NIADEKGNILSTKNVKP-ENRFDNPEINRNDLRAILLNSLEN--DTVIWDRKLVMLEPGKKK-W-TLTFEN 165 (398)
T ss_dssp CE-------EEECSSSEEEEECCCGG-GTTSSCCEECHHHHHHHHHHTSCT--TSEEESCCEEEEEECSSS-E-EEEETT
T ss_pred ce-------EEECCCCCchhhccccc-cCCCCCceECHHHHHHHHHhhcCC--CEEEECCEEEEEEECCCE-E-EEEECC
Confidence 10 111111110 11 11 011234568999999999987754 689999999999887743 4 477665
Q ss_pred CccccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCcceeeE-EEEEEeecCCC---------C
Q 006778 254 MGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALG-IKEVWEIDEGK---------H 323 (631)
Q Consensus 254 ~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~~g-~~~~~~~~~~~---------~ 323 (631)
|.+++||+||+|||.+|.+|+.+ +.. .+...+.. +... ++... .
T Consensus 166 ---------------g~~~~ad~vV~AdG~~S~vR~~l----~~~-----~~~~~g~~~~~~~--~~~~~~~~~~~~~~~ 219 (398)
T 2xdo_A 166 ---------------KPSETADLVILANGGMSKVRKFV----TDT-----EVEETGTFNIQAD--IHQPEINCPGFFQLC 219 (398)
T ss_dssp ---------------SCCEEESEEEECSCTTCSCCTTT----CCC-----CCEEEEEEEEEEE--ESSHHHHSHHHHHHH
T ss_pred ---------------CcEEecCEEEECCCcchhHHhhc----cCC-----CceEcceEEEEEE--eCchhccCchhHhhc
Confidence 66799999999999999999864 211 12222221 2211 22100 0
Q ss_pred CCCcEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEEcCC--CCC----CCCCcHHHHHHh----hc-CcchhccccCCc
Q 006778 324 NPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALN--YHN----PFLNPYEEFQKF----KH-HPAIKPLLEGGT 392 (631)
Q Consensus 324 ~~g~~~h~~~~~~~~~~~G~~~~~~~~~~~~~ig~~~~~d--~~~----~~~~~~~~~~~~----~~-~p~i~~~l~~~~ 392 (631)
..+ ..+.++ .. ...+.+|..++.+.+.+..... +.. +...+.+..+.+ .. +|.+.++++...
T Consensus 220 ~~g-~~~~~~----~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 292 (398)
T 2xdo_A 220 NGN-RLMASH----QG--NLLFANPNNNGALHFGISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFSDWDERYKELIHTTL 292 (398)
T ss_dssp TTS-EEEEEE----TT--EEEEEEEEETTEEEEEEEEECCTTC---CCSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHCS
T ss_pred CCc-eEEEec----CC--CeEEEEeCCCCcEEEEEEEecCcccccccccCcCCHHHHHHHHHHHHcCCChHHHHHHhCcc
Confidence 112 222221 11 2245677778777777664322 111 112222222222 21 334544443211
Q ss_pred -eeeecceeeccCCcccCCcccC-C--CEEEEccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCC--CchHHHHHHHH
Q 006778 393 -VVQYGARTLNEGGLQSIPYPVF-P--GGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE--DSNMEIYWDTL 466 (631)
Q Consensus 393 -~~~~~~~~i~~gg~~~~p~~~~-~--~v~LiGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~--~~~l~~Y~~~~ 466 (631)
...+....++ ..++|.. + |++|||||||.++|+.|||+++||+||..||++|.+...+ ..+|+.|++.|
T Consensus 293 ~~~~~~~~~~~-----~~~~~~~~~~~rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~~~L~~Y~~~r 367 (398)
T 2xdo_A 293 SFVGLATRIFP-----LEKPWKSKRPLPITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLADGKFNSIEEAVKNYEQQM 367 (398)
T ss_dssp CCEEEEEEECC-----CCSCCCSCCSSCEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHH
T ss_pred cceeeeeEecc-----CCCCcccCCCccEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Confidence 1111111111 1135544 5 8999999999999999999999999999999999875222 36789999999
Q ss_pred HHhHHHHHHHHHh
Q 006778 467 QKSWVWQELQRAR 479 (631)
Q Consensus 467 ~~~~~~~~l~~~r 479 (631)
+.. ..+.+..++
T Consensus 368 ~~~-~~~~~~~s~ 379 (398)
T 2xdo_A 368 FIY-GKEAQEEST 379 (398)
T ss_dssp HHH-HHHHHHHHH
T ss_pred HHH-HHHHHHHHH
Confidence 864 444444443
No 22
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.92 E-value=6.5e-24 Score=237.16 Aligned_cols=332 Identities=15% Similarity=0.142 Sum_probs=187.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhh------hhcCCCeee
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQW------KQEEAPIRV 179 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~------~~~~~~~~~ 179 (631)
+++||+||||||+||++|+.|++. |++|+||||.+..+. ...+..+.++.+. ++..+ .....+...
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~------G~~V~vlEr~~~~~~-~~~~~~l~~~~~~-~l~~lGl~~~~~~~~~~~~~ 96 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHR------QVGHLVVEQTDGTIT-HPRVGTIGPRSME-LFRRWGVAKQIRTAGWPGDH 96 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSCSCCS-SCCCCEECHHHHH-HHHHTTCHHHHHTSSCCTTS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEeCCCCCCC-CCceeeeCHHHHH-HHHHcCChHHHHhhcCCccc
Confidence 468999999999999999999999 999999999987643 2346667776653 22222 111111100
Q ss_pred eccCcceEeecc-CC---cccCCCC-------CCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEE
Q 006778 180 PVSSDKFWFLTK-DR---AFSLPSP-------FSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIG 248 (631)
Q Consensus 180 ~~~~~~~~~l~~-~~---~~~~p~~-------~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~g 248 (631)
. ....++... .. .+.++.. ......+.+++..+.+.|.+.+++. |+++++|++++.++++ | .
T Consensus 97 ~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~-v-~ 169 (549)
T 2r0c_A 97 P--LDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDH-V-R 169 (549)
T ss_dssp B--CCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSC-E-E
T ss_pred c--cceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCE-E-E
Confidence 0 000111100 00 0111100 1112357899999999999999887 8999999999988754 4 2
Q ss_pred EEeCCCccccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCcceeeEEEEEEeecCC----CCC
Q 006778 249 IGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEG----KHN 324 (631)
Q Consensus 249 V~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~----~~~ 324 (631)
|++.+ ..+|+ ..+++||+||+|||.+|.+|+.+ |+... ....... .+...+..+.. ...
T Consensus 170 v~~~~---~~~G~-------~~~i~a~~vVgADG~~S~vR~~l----g~~~~-g~~~~~~--~~~~~~~~~~~~~~~~~~ 232 (549)
T 2r0c_A 170 ATITD---LRTGA-------TRAVHARYLVACDGASSPTRKAL----GIDAP-PRHRTQV--FRNILFRAPELRSLLGER 232 (549)
T ss_dssp EEEEE---TTTCC-------EEEEEEEEEEECCCTTCHHHHHH----TCCCC-BSSCCEE--EEEEEEECTTHHHHHGGG
T ss_pred EEEEE---CCCCC-------EEEEEeCEEEECCCCCcHHHHHc----CCCCC-CCcccce--EEEEEEECCchHHhcCCC
Confidence 54433 11232 25799999999999999998876 55421 1111111 22222232210 001
Q ss_pred CCcEEEEeccCCCCCCcceEEEEEeCCC-eEEEEEEEcCCCCCCCCCcHHHHHHhhcCcchhccccCCceeeecceeecc
Q 006778 325 PGEILHTLGWPLDQKTYGGSFLYHMNDR-QIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNE 403 (631)
Q Consensus 325 ~g~~~h~~~~~~~~~~~G~~~~~~~~~~-~~~ig~~~~~d~~~~~~~~~~~~~~~~~~p~i~~~l~~~~~~~~~~~~i~~ 403 (631)
+. ..+++.-| .+ +..+++|.+++ ...+.+ ..+.. + .++.+..+.++.. +..-+. .+.+......+.
T Consensus 233 ~~-~~~~~~~p--~~--~~~~~~p~~~~~~~~~~~--~~~~~-~-~~~~~~~~~l~~~--~~~~~~-~~~~~~~~~~~~- 299 (549)
T 2r0c_A 233 AA-LFFFLMLS--SS--LRFPLRALDGRGLYRLTV--GVDDA-S-KSTMDSFELVRRA--VAFDTE-IEVLSDSEWHLT- 299 (549)
T ss_dssp CC-SEEEEEEE--TT--EEEEEEESSSSSEEEEEE--ECSTT-C-CSCCCHHHHHHHH--BCSCCC-CEEEEEEEEEEC-
T ss_pred Cc-eEEEEECC--CC--cEEEEEEECCCcEEEEEe--cCCCC-C-CCHHHHHHHHHHH--hCCCCc-eeEEEEecchhH-
Confidence 12 22222111 10 23577887653 333332 22111 1 2222222222210 000011 111111111111
Q ss_pred CCcccCCcccCCCEEEEccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCC---CchHHHHHHHHHHhHHHHHHHHHhc
Q 006778 404 GGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQELQRARN 480 (631)
Q Consensus 404 gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~---~~~l~~Y~~~~~~~~~~~~l~~~r~ 480 (631)
....++|..+|++|+|||||.++|+.|||+|+||+||..||+.|...+.. ...|+.|+++|+.. ..+.+..++.
T Consensus 300 --~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~a~~~lL~~Y~~eR~~~-a~~~~~~s~~ 376 (549)
T 2r0c_A 300 --HRVADSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRGWAGPGLLATYEEERRPV-AITSLEEANV 376 (549)
T ss_dssp --CEECSCSEETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHTCSCTTTTHHHHHHHHHH-HHHHHHC---
T ss_pred --hhhHHhhcCCcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 12345777899999999999999999999999999999999999876543 56899999999974 6666666665
Q ss_pred cchhh
Q 006778 481 YRPAF 485 (631)
Q Consensus 481 ~~~~~ 485 (631)
....+
T Consensus 377 ~~~~~ 381 (549)
T 2r0c_A 377 NLRRT 381 (549)
T ss_dssp -----
T ss_pred HHHhh
Confidence 55544
No 23
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.92 E-value=1.4e-24 Score=231.71 Aligned_cols=318 Identities=15% Similarity=0.007 Sum_probs=179.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhc-CC-CeeeeccCcc
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQE-EA-PIRVPVSSDK 185 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~-~~-~~~~~~~~~~ 185 (631)
.||+||||||+||++|+.|++. .||++|+|+||.+.+.. ...+..+.+..+..+.. .... .. ..........
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~----~~G~~V~v~E~~~~~~~-~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 74 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQA----RPLWAIDIVEKNDEQEV-LGWGVVLPGRPGQHPAN-PLSYLDAPERLNPQFLED 74 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSSCTTCC-CCSEEEEESCTTTCTTC-GGGGSSCGGGGCCEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHhc----CCCCCEEEEECCCCCCc-ceeEEEeCcHHHHhhcC-cchhhhhhHHHhhccccc
Confidence 3899999999999999999986 46899999999876621 11222222222221110 0000 00 0000011112
Q ss_pred eEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccc
Q 006778 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (631)
Q Consensus 186 ~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (631)
+.+......+. .. .....+.++|..|.+.|.+.+++.|++|+++++|+++...
T Consensus 75 ~~~~~~g~~~~--~~-~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~------------------------ 127 (381)
T 3c4a_A 75 FKLVHHNEPSL--MS-TGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL------------------------ 127 (381)
T ss_dssp EEEEESSSEEE--CC-CCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC------------------------
T ss_pred eEEEeCCeeEE--ec-CCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc------------------------
Confidence 22222111111 10 0123467999999999999999999999999988665310
Q ss_pred ccCceEEEcCEEEEecCCCCchhHHHHHHcCCCcccccCCcceeeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEE
Q 006778 266 FQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSF 345 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~~~~~~~~~~G~~~ 345 (631)
.+++||+||+|||.+|. |+.+.+.++... +. + .+......+... ... ....+... ..|..|
T Consensus 128 ----~~~~ad~vV~AdG~~S~-R~~l~~~~g~~~-----~~-~-~~~~~~~~~~~~--~~~-~~~~~~~~----~~g~~~ 188 (381)
T 3c4a_A 128 ----PLADYDLVVLANGVNHK-TAHFTEALVPQV-----DY-G-RNKYIWYGTSQL--FDQ-MNLVFRTH----GKDIFI 188 (381)
T ss_dssp ----CGGGCSEEEECCGGGGG-TCCSSGGGCCCC-----EE-E-EEEEEEEEESSC--CSS-EEEEEEEE----TTEEEE
T ss_pred ----ccccCCEEEECCCCCch-HHhhhhhcCCCc-----cc-C-CccEEEEecCCC--CCc-ceeeEeeC----CCcEEE
Confidence 12469999999999999 876644445442 11 0 111111112111 111 11111111 113333
Q ss_pred --EEEeCCCeEEEEEEEcCC----CCCCCCCcHHHHH----HhhcC-cchhccccCCceeeecceeeccCCcccCCcccC
Q 006778 346 --LYHMNDRQIALGLVVALN----YHNPFLNPYEEFQ----KFKHH-PAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVF 414 (631)
Q Consensus 346 --~~~~~~~~~~ig~~~~~d----~~~~~~~~~~~~~----~~~~~-p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~ 414 (631)
+||..++...+.+....+ ..-+..++.+..+ .|... +. .++++... ..+ +.......++|..
T Consensus 189 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~-~~~-----~~~~~~~~~~~~~ 261 (381)
T 3c4a_A 189 AHAYKYSDTMSTFIVECSEETYARARLGEMSEEASAEYVAKVFQAELGG-HGLVSQPG-LGW-----RNFMTLSHDRCHD 261 (381)
T ss_dssp EEEEECSSSCEEEEEEECHHHHHHTTSSSSCHHHHHHHHHHHTHHHHTT-CCCBCCTT-TCS-----EEEEECCCSCSEE
T ss_pred EEEEEecCCeEEEEEECCccccccCCcccCChHHHHHHHHHHhcccCCC-chhhcCCC-cce-----eeeccccCCCccc
Confidence 588877765544433211 0001122222112 22211 22 13333211 001 0011123467888
Q ss_pred CCEEEEccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHhHHHHHHHHHhccchhh
Q 006778 415 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKSWVWQELQRARNYRPAF 485 (631)
Q Consensus 415 ~~v~LiGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~~~~l~~Y~~~~~~~~~~~~l~~~r~~~~~~ 485 (631)
+|++|||||||+++|+.|||+++||+||..||++|...-....+|+.|++.++.. ..+.+..++....+|
T Consensus 262 grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~aL~~Y~~~r~~~-~~~~~~~s~~~~~~~ 331 (381)
T 3c4a_A 262 GKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTEDGVPAALKRFEERALPL-VQLFRGHADNSRVWF 331 (381)
T ss_dssp TTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhh
Confidence 9999999999999999999999999999999999987522246799999999865 777777777666555
No 24
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.92 E-value=1.9e-23 Score=231.61 Aligned_cols=225 Identities=15% Similarity=0.110 Sum_probs=142.3
Q ss_pred CcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCC
Q 006778 205 GNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (631)
Q Consensus 205 ~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~ 284 (631)
..+.+++..+.+.|.+.+++.|++++.+ +|+++..++++.+++|++.+ |.+++||+||+|+|.+
T Consensus 166 ~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~---------------g~~~~ad~vV~A~G~~ 229 (511)
T 2weu_A 166 YAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQ---------------HGEISGDLFVDCTGFR 229 (511)
T ss_dssp CEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESS---------------SCEEECSEEEECCGGG
T ss_pred eeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECC---------------CCEEEcCEEEECCCcc
Confidence 3678999999999999999999999999 99999987767777888876 6689999999999999
Q ss_pred CchhHHHHHHcCCCccc--ccCCcceeeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEEcC
Q 006778 285 GSLSEKLIKNFKLREKS--HAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL 362 (631)
Q Consensus 285 s~~~~~l~~~~g~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~~~~~~~~~~G~~~~~~~~~~~~~ig~~~~~ 362 (631)
|.+++++ ++..... ...+...++++.. ..+............. . . .|..|++|..+ ...+|++...
T Consensus 230 S~~~~~~---~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~---~--~g~~~~~P~~~-~~~~g~~~~~ 297 (511)
T 2weu_A 230 GLLINQT---LGGRFQSFSDVLPNNRAVALRV--PRENDEDMRPYTTATA-M---S--AGWMWTIPLFK-RDGNGYVYSD 297 (511)
T ss_dssp CCCCCCC---TCCCEEECTTTCCCCEEEEEEE--ECSSGGGCCSSEEEEE-E---T--TEEEEEEECSS-EEEEEEEECT
T ss_pred hHHHHHH---hCCCCccccccCcccceEEEEe--ccCCCCCCCcceecee-c---C--CCcEEEEECCC-ceEEEEEECC
Confidence 9885432 3443200 1112222333221 2211100112122111 1 1 24578889877 6777776643
Q ss_pred CCCCCCCCcHHHHHHhhcCcchhccccCCceeeecceeeccCCcccCCcccCCCEEEEccCCccCCCCCCcchHHHHHHH
Q 006778 363 NYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSG 442 (631)
Q Consensus 363 d~~~~~~~~~~~~~~~~~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Al~sa 442 (631)
+ ..++.+..+.+...-.....+.....+.. ..++ .+++..+|++|||||||+++|+.|+|+++|++||
T Consensus 298 ~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da 365 (511)
T 2weu_A 298 E----FISPEEAERELRSTVAPGRDDLEANHIQM------RIGR--NERTWINNCVAVGLSAAFVEPLESTGIFFIQHAI 365 (511)
T ss_dssp T----TSCHHHHHHHHHHHHCTTCTTSCCEEEEC------CCEE--ESCSEETTEEECGGGTEECCGGGCCHHHHHHHHH
T ss_pred C----CCCHHHHHHHHHHHhCcccccccceeEEe------eccc--cccccCCCEEEEechhhccCccccccHHHHHHHH
Confidence 2 22333333333211000011111122211 1122 2466679999999999999999999999999999
Q ss_pred HHHHHHHhcccCCCchHHHHHHHHHHh
Q 006778 443 MLAAEAGFGVLHEDSNMEIYWDTLQKS 469 (631)
Q Consensus 443 ~~aA~~l~~~l~~~~~l~~Y~~~~~~~ 469 (631)
..||++|...-....+++.|++.++..
T Consensus 366 ~~La~~l~~~~~~~~~l~~Y~~~~~~~ 392 (511)
T 2weu_A 366 EQLVKHFPGERWDPVLISAYNERMAHM 392 (511)
T ss_dssp HHHHHTCCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence 999999875222246789999988764
No 25
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.91 E-value=6.8e-23 Score=228.57 Aligned_cols=223 Identities=12% Similarity=0.060 Sum_probs=139.1
Q ss_pred CcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCC
Q 006778 205 GNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (631)
Q Consensus 205 ~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~ 284 (631)
..+.+++..+.+.|.+.+++.|++++.+ +|+++..++++.+++|.+.+ |.+++||+||+|+|.+
T Consensus 158 ~~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~---------------g~~i~ad~vV~A~G~~ 221 (538)
T 2aqj_A 158 HAWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKE---------------GRTLEADLFIDCSGMR 221 (538)
T ss_dssp CEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETT---------------SCEECCSEEEECCGGG
T ss_pred ccEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECC---------------CcEEEeCEEEECCCCc
Confidence 3688999999999999999999999999 89999887767777788776 6689999999999999
Q ss_pred CchhHHHHHHcCCCccc--ccCCcceeeEEEEEEeecCC--CCCCCcEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEE
Q 006778 285 GSLSEKLIKNFKLREKS--HAQHQTYALGIKEVWEIDEG--KHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVV 360 (631)
Q Consensus 285 s~~~~~l~~~~g~~~~~--~~~~~~~~~g~~~~~~~~~~--~~~~g~~~h~~~~~~~~~~~G~~~~~~~~~~~~~ig~~~ 360 (631)
|.++.++ ++..... ...+...++.+.. ..... ...+.... .. .. .|..|++|..+ ...+|++.
T Consensus 222 s~~~~~~---lg~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~----~~--~g~~~~~p~~~-~~~~g~v~ 288 (538)
T 2aqj_A 222 GLLINQA---LKEPFIDMSDYLLCDSAVASAV--PNDDARDGVEPYTSS-IA----MN--SGWTWKIPMLG-RFGSGYVF 288 (538)
T ss_dssp CCCCCCC---TCCCEEECTTTCCCCEEEEEEE--ECCHHHHCCCSSEEE-EE----CS--SEEEEEEEETT-EEEEEEEE
T ss_pred hhhHHHH---hCCCccccccccccceEEEEec--ccCCcccCCCCceee-ee----cC--CceEEEecCCC-ceEEEEEE
Confidence 9885532 3433100 0011112222211 11100 01111111 11 11 24578889877 46777765
Q ss_pred cCCCCCCCCCcHHHHHHhhcCcchhccccCCceeeecceeeccCCcccCCcccCCCEEEEccCCccCCCCCCcchHHHHH
Q 006778 361 ALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMK 440 (631)
Q Consensus 361 ~~d~~~~~~~~~~~~~~~~~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Al~ 440 (631)
..++ .++.+..+.+...-....+ .....+. +. .+ ..++++.+|++|||||||+++|+.|+|+++||+
T Consensus 289 ~~~~----~~~~~~~~~l~~~~~~~~~-~~~~~~~-----~~-~~--~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~ 355 (538)
T 2aqj_A 289 SSHF----TSRDQATADFLKLWGLSDN-QPLNQIK-----FR-VG--RNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYA 355 (538)
T ss_dssp CTTT----SCHHHHHHHHHHHHTCCTT-CCCEEEE-----CC-CE--EESCSEETTEEECGGGTEECCGGGSCHHHHHHH
T ss_pred cCCC----CChHHHHHHHHHHhcCCCC-CCceEEe-----ec-cc--cccccccCCEEEEcccccccCcchhccHHHHHH
Confidence 4322 2222222222210000011 1112221 11 11 134677899999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCCchHHHHHHHHHHh
Q 006778 441 SGMLAAEAGFGVLHEDSNMEIYWDTLQKS 469 (631)
Q Consensus 441 sa~~aA~~l~~~l~~~~~l~~Y~~~~~~~ 469 (631)
||..||++|...-....++..|++.++..
T Consensus 356 da~~La~~L~~~~~~~~~l~~Y~~~~~~~ 384 (538)
T 2aqj_A 356 ALYQLVKHFPDTSFDPRLSDAFNAEIVHM 384 (538)
T ss_dssp HHHHHHHTCCBTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCCHHHHHHHHHHHHHH
Confidence 99999998864222245789999988865
No 26
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.90 E-value=1.2e-22 Score=226.05 Aligned_cols=227 Identities=14% Similarity=0.068 Sum_probs=136.8
Q ss_pred cEEEeHHHHHHHHHHHHHh-cCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCC
Q 006778 206 NYVISLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (631)
Q Consensus 206 ~~~v~~~~l~~~L~~~a~~-~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~ 284 (631)
.+.+++..+.+.|.+.+++ .|++++.+ +|+++..++++.+++|.+.+ |.+++||+||+|||.+
T Consensus 169 ~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~---------------g~~i~ad~vV~AdG~~ 232 (526)
T 2pyx_A 169 GYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQ---------------NGEISGQLFIDCTGAK 232 (526)
T ss_dssp EEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESS---------------SCEEECSEEEECSGGG
T ss_pred eEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECC---------------CCEEEcCEEEECCCcc
Confidence 5789999999999999999 89999999 69999887667666787765 5579999999999999
Q ss_pred CchhHHHHHHcCCCccccc--CCcceeeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEEcC
Q 006778 285 GSLSEKLIKNFKLREKSHA--QHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL 362 (631)
Q Consensus 285 s~~~~~l~~~~g~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~g~~~h~~~~~~~~~~~G~~~~~~~~~~~~~ig~~~~~ 362 (631)
|.++++ .++....... .+...++.+......+... ......... .. .|..|++|..+ ...++++...
T Consensus 233 S~~~~~---~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~--~g~~~~~pl~~-~~~~~~v~~~ 301 (526)
T 2pyx_A 233 SLLLGE---HLQVPFLSQKSVLFNDRALAIQVPYSDANSP-IASCTHSTA----QP--NGWIWDIGLPT-RKGVGYVYSS 301 (526)
T ss_dssp CCCCCC---CTCCCEEECHHHHCCCEEEEEEEECSSTTCC-CCSSEEEEE----ET--TEEEEEEECSS-EEEEEEEECT
T ss_pred hHHHHH---HhCCCcccccccccCccEEEEEeeccCCCCC-CCCceeEEe----cC--CCeEEEeeCCC-ceEEEEEecC
Confidence 988332 1344310000 1112233322211110011 112222211 01 24568888877 4666666543
Q ss_pred CCCCCCCCcHHHHHHhhcC-cchhccccCCceeeecceeeccCCcccCCcccCCCEEEEccCCccCCCCCCcchHHHHHH
Q 006778 363 NYHNPFLNPYEEFQKFKHH-PAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKS 441 (631)
Q Consensus 363 d~~~~~~~~~~~~~~~~~~-p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Al~s 441 (631)
++ .+..+..+.++.. ....+.++..+.. .++... ...++++.+|++|||||||+++|+.|+|+++||+|
T Consensus 302 ~~----~~~~~~~~~l~~~l~~~~~~l~~~~~~-----~~~~~~-~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~d 371 (526)
T 2pyx_A 302 SH----TNDIDAQKTLFNYLGVDGAAADKLEPR-----QLAINP-GYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWT 371 (526)
T ss_dssp TT----CCHHHHHHHHHHHHTCCHHHHHHCCCE-----EEECCC-EEESCSEETTEEECGGGTEECCCTTCHHHHHHHHH
T ss_pred CC----CChHHHHHHHHHHHHhcCcccccCCce-----EEeccc-CccccccCCCEEEEEhhhcccCccccccHHHHHHH
Confidence 32 1222221222110 0001112111111 111110 01346678999999999999999999999999999
Q ss_pred HHHHHHHHhcccC-CCchHHHHHHHHHHh
Q 006778 442 GMLAAEAGFGVLH-EDSNMEIYWDTLQKS 469 (631)
Q Consensus 442 a~~aA~~l~~~l~-~~~~l~~Y~~~~~~~ 469 (631)
|..||++|..... ...+++.|++.++..
T Consensus 372 a~~La~~L~~~~~~~~~~l~~Y~~~~~~~ 400 (526)
T 2pyx_A 372 ASTLAQQLPPNRMVMDTISARVNERYQQH 400 (526)
T ss_dssp HHHHHHTCCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcCCcCHHHHHHHHHHHHHH
Confidence 9999998863211 135688999988865
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.89 E-value=1.7e-22 Score=225.79 Aligned_cols=225 Identities=12% Similarity=0.069 Sum_probs=139.1
Q ss_pred cEEEeHHHHHHHHHHHHHhc-CcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCC
Q 006778 206 NYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (631)
Q Consensus 206 ~~~v~~~~l~~~L~~~a~~~-Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~ 284 (631)
.+.+++..+.+.|.+.+++. ||+++++ +|+++..++++.+++|.+.+ |.++.||+||+|+|.+
T Consensus 188 ~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~---------------G~~i~ad~vI~A~G~~ 251 (550)
T 2e4g_A 188 AWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTAT---------------GRVFDADLFVDCSGFR 251 (550)
T ss_dssp EEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETT---------------SCEEECSEEEECCGGG
T ss_pred ceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECC---------------CCEEECCEEEECCCCc
Confidence 57899999999999999998 9999999 99999887667777888876 6789999999999999
Q ss_pred CchhHHHHHHcCCCccc--ccCCcceeeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEEcC
Q 006778 285 GSLSEKLIKNFKLREKS--HAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL 362 (631)
Q Consensus 285 s~~~~~l~~~~g~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~~~~~~~~~~G~~~~~~~~~~~~~ig~~~~~ 362 (631)
|.++.++ ++..... ...+....+.+......+... ......... . . .|..|++|..+ ...+|++...
T Consensus 252 S~~~~~~---lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~---~--~g~~~~ipl~~-~~~~g~v~~~ 320 (550)
T 2e4g_A 252 GLLINKA---MEEPFLDMSDHLLNDSAVATQVPHDDDANG-VEPFTSAIA-M---K--SGWTWKIPMLG-RFGTGYVYSS 320 (550)
T ss_dssp CCCCCCC---TCCCEEECTTTCCCCEEEEEEEECCHHHHC-CCSSEEEEE-C---S--SEEEEEEECSS-EEEEEEEECT
T ss_pred hhhHHHH---hCCCcccccccccccceEEEeecccCCccc-CCCceeeee-c---C--CceEEEccCCC-ccceEEEEec
Confidence 9874322 3433100 001111122221111100000 111111111 1 1 24467888876 5677777643
Q ss_pred CCCCCCCCcHHHHHHhhcCcchhccccCCceeeecceeeccCCcccCCcccCCCEEEEccCCccCCCCCCcchHHHHHHH
Q 006778 363 NYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSG 442 (631)
Q Consensus 363 d~~~~~~~~~~~~~~~~~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~Al~sa 442 (631)
++ .++.+..+.+...-.....+...+.+.+ ..++ .++++.+|++|||||||+++|+.|||+++|++||
T Consensus 321 ~~----~~~~~~~~~l~~~~~~~p~l~~~~~i~~------~~~~--~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da 388 (550)
T 2e4g_A 321 RF----ATEDEAVREFCEMWHLDPETQPLNRIRF------RVGR--NRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAAL 388 (550)
T ss_dssp TT----SCHHHHHHHHHHHTTCCTTTSCCEEEEC------CCEE--ESCSEETTEEECSTTTEECCGGGSCHHHHHHHHH
T ss_pred CC----CChHHHHHHHHHhhCcCcccCCCceEEe------cCCC--ccccccCCEEEEehhhcccCccchhhHHHHHHHH
Confidence 22 2332222333211000011121222211 1111 2456778999999999999999999999999999
Q ss_pred HHHHHHHhcccCCCchHHHHHHHHHHh
Q 006778 443 MLAAEAGFGVLHEDSNMEIYWDTLQKS 469 (631)
Q Consensus 443 ~~aA~~l~~~l~~~~~l~~Y~~~~~~~ 469 (631)
..||++|...-....++++|++.++..
T Consensus 389 ~~La~~L~~~~~~~~~l~~Y~~~~~~~ 415 (550)
T 2e4g_A 389 YQLVKHFPDKSLNPVLTARFNREIETM 415 (550)
T ss_dssp HHHHHTCCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHH
Confidence 999998865322346789999988865
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.84 E-value=7.3e-20 Score=198.31 Aligned_cols=309 Identities=14% Similarity=0.104 Sum_probs=165.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC--C-CCccccccccChHhHHHH--h--hhhhhcCCCee
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE--V-GAHIISGNVFEPRALNEL--L--PQWKQEEAPIR 178 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~--~-g~~~~~g~~i~~~~l~~l--~--~~~~~~~~~~~ 178 (631)
|.+||+||||||+||++|+.|++. |++|+||||.+. . ++...++.++....+..+ + ..|.....+.
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~------G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~- 93 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQH------DVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSEEFGY- 93 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHT------TCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHHHHCE-
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC------CCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhhcccc-
Confidence 568999999999999999999999 999999999862 1 122233344444443211 1 1122111110
Q ss_pred eeccCcceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCcccc
Q 006778 179 VPVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAK 258 (631)
Q Consensus 179 ~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~ 258 (631)
....+.+... ..+.+.... ....+.+.+..+..+|.+.+++.|++++... + ...+ +.
T Consensus 94 ---~~~~~~~~~~-~~~~~~~~~-~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~-v---~~~~------l~-------- 150 (430)
T 3ihm_A 94 ---FGHYYYVGGP-QPMRFYGDL-KAPSRAVDYRLYQPMLMRALEARGGKFCYDA-V---SAED------LE-------- 150 (430)
T ss_dssp ---EEEEEEECSS-SCEEEEEEE-EEEEBEECHHHHHHHHHHHHHHTTCEEEECC-C---CGGG------HH--------
T ss_pred ---cceeEEECCC-Cccccchhc-CCcceeecHHHHHHHHHHHHHHcCCEEEEEe-c---chhh------hh--------
Confidence 0001111110 011110000 0124678999999999999999999987532 1 0000 00
Q ss_pred CCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCccc--ccCCcceeeEEEEEEeecCCCCCCCcEEEEeccCC
Q 006778 259 DGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKS--HAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPL 336 (631)
Q Consensus 259 ~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~~~~~ 336 (631)
.....+|+||+|||.+|.++. ++..... ...++ .......+..+.... ..+..+... +
T Consensus 151 ----------~~~~~ad~VV~AdG~~S~~~~-----~~~~~~~~~~~~p~-r~~~~~~~~g~~~~~-~~~~~~~~~--~- 210 (430)
T 3ihm_A 151 ----------GLSEQYDLLVVCTGKYALGKV-----FEKQSENSPFEKPQ-RALCVGLFKGIKEAP-IRAVTMSFS--P- 210 (430)
T ss_dssp ----------HHHTTSSEEEECCCCTTGGGG-----SCBCGGGCCCSSCS-SEEEEEEEESBCCCS-SCCEEEEEE--T-
T ss_pred ----------hhcccCCEEEECCCCcchHHh-----ccCCCCCCcccCCC-eeEEEEEEccCCCCC-cCeeeeeec--C-
Confidence 011258999999999997642 3322100 01121 112221122222211 112112211 1
Q ss_pred CCCCcceEEEEEe--CCCeEEEEEEEcCC------CCCCC--CCcHHHH----HHhh-cCcchhccccCCceeee--cc-
Q 006778 337 DQKTYGGSFLYHM--NDRQIALGLVVALN------YHNPF--LNPYEEF----QKFK-HHPAIKPLLEGGTVVQY--GA- 398 (631)
Q Consensus 337 ~~~~~G~~~~~~~--~~~~~~ig~~~~~d------~~~~~--~~~~~~~----~~~~-~~p~i~~~l~~~~~~~~--~~- 398 (631)
..|..|++|. .++...+.++.... +.... ..+.+.. +.+. .+|.+.++++....... ..
T Consensus 211 ---~~G~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 287 (430)
T 3ihm_A 211 ---GHGELIEIPTLSFNGMSTALVLENHIGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEFDLANSSLD 287 (430)
T ss_dssp ---TTEEEEEEEEEETTEEEEEEEEEECTTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTCEESSSTTS
T ss_pred ---CCcceEEecccCCCcceEEEEEEecCCCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchhccccCccc
Confidence 1255677774 34455555443321 11110 1222222 2222 35667666665441110 00
Q ss_pred ----eeeccCCcccCCcccCCCEEE-EccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHH
Q 006778 399 ----RTLNEGGLQSIPYPVFPGGAI-IGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQK 468 (631)
Q Consensus 399 ----~~i~~gg~~~~p~~~~~~v~L-iGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~~~~l~~Y~~~~~~ 468 (631)
+..+ ......++|..++++| +|||||.++|+.|||+++||+||..||++|.+......+|..|+..++.
T Consensus 288 ~~~~~~~~-~~~~~~~~~~~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~~~~~~~~~~~~~~r~~ 361 (430)
T 3ihm_A 288 ILQGGVVP-AFRDGHATLNNGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAHSVYDLRFSEHLERRRQ 361 (430)
T ss_dssp EEEECCCC-EEBCSEEECTTSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHCSCCSHHHHHHHHHHHH
T ss_pred eeecceee-cccccccccCCCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 0111 1112345777889988 9999999999999999999999999999998875446789999877763
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.70 E-value=4.9e-16 Score=171.19 Aligned_cols=144 Identities=23% Similarity=0.171 Sum_probs=97.0
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCc
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (631)
...+||+|||||++||++|+.|++. |++|+|||+.+.+|.. ....+.+..+..+ ..+.... .
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~------G~~V~liEk~~~~g~~--~~~~~~~~~~~~l-~~~g~~~-----~---- 151 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALL------GARVVLVEKRIKFSRH--NVLHLWPFTIHDL-RALGAKK-----F---- 151 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCSSCCCC--CEEECCHHHHHHH-HTTTHHH-----H----
T ss_pred cCCCCEEEECccHHHHHHHHHHHHC------CCeEEEEEeccccCCC--CcccCChhHHHHH-HHcCCcc-----c----
Confidence 3568999999999999999999999 9999999999877643 1222334333222 1111100 0
Q ss_pred ceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcC-CCcEEEEEeCCCccccCCCcc
Q 006778 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDA-DNKVIGIGTNDMGIAKDGSKK 263 (631)
Q Consensus 185 ~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~-~g~v~gV~~~d~g~~~~G~~~ 263 (631)
...+. ......+++..+.+.|.+.+++.|++|+++++|+++..++ ++..+.|.+.+. .+|+
T Consensus 152 -------~~~~~------~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~---~~g~-- 213 (497)
T 2bry_A 152 -------YGRFC------TGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPN---PPAQ-- 213 (497)
T ss_dssp -------CTTTT------CTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESC---CCHH--
T ss_pred -------ccccc------ccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEEC---CCCC--
Confidence 00000 0112357889999999999999999999999999998752 233345665320 0121
Q ss_pred ccccCceEEEcCEEEEecCCCCchhH
Q 006778 264 ENFQRGVELRGRITLLAEGCRGSLSE 289 (631)
Q Consensus 264 ~~f~~g~~i~a~~vV~A~G~~s~~~~ 289 (631)
..+++||+||+|||.+|.+++
T Consensus 214 -----~~~i~ad~VV~A~G~~S~~r~ 234 (497)
T 2bry_A 214 -----LASYEFDVLISAAGGKFVPEG 234 (497)
T ss_dssp -----HHTCCBSEEEECCCTTCCCTT
T ss_pred -----EEEEEcCEEEECCCCCccccc
Confidence 046899999999999998764
No 30
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.67 E-value=1.8e-15 Score=160.57 Aligned_cols=290 Identities=18% Similarity=0.175 Sum_probs=159.1
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCc-cccccccChHh-------HH-------HHhhh
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH-IISGNVFEPRA-------LN-------ELLPQ 169 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~-~~~g~~i~~~~-------l~-------~l~~~ 169 (631)
..++||||||||++|+++|+.|++. |++|+|||+....++. ..+++.+.+.. +. ++++.
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~------G~~V~llE~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~ 88 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKE------NKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKG 88 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSTTTTHHHHCCCBCCGGGSCSSCSHHHHHHHHHHHHTTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhC------CCcEEEEeCCCCCcccchhcCceeccCccCCCCcHHHHHHHHHHHHHHH
Confidence 3569999999999999999999999 9999999998644332 23344443221 11 11111
Q ss_pred hhhc-----CCCee--------eeccC------------cceEeeccCCcc-cCCCCCC-------CCCcEEEeHHHHHH
Q 006778 170 WKQE-----EAPIR--------VPVSS------------DKFWFLTKDRAF-SLPSPFS-------NRGNYVISLSQLVR 216 (631)
Q Consensus 170 ~~~~-----~~~~~--------~~~~~------------~~~~~l~~~~~~-~~p~~~~-------~~~~~~v~~~~l~~ 216 (631)
+... ..... ..... ..+.+++...-. ..|.... ......++...+.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (382)
T 1ryi_A 89 LGEELYALSGVDIRQHNGGMFKLAFSEEDVLQLRQMDDLDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCK 168 (382)
T ss_dssp HHHHHHHHHCCCCCCBCCCEEEEESSHHHHHHHHTTTTSTTEEEEEHHHHHHHCTTSCTTCCEEEEETTCCBCCHHHHHH
T ss_pred HHHHHHHhhCCCcCeeecceEEEEeCHHHHHHHHHHhhcCCeEEECHHHHHHhCCCCCcccceEEEeCCCeEEcHHHHHH
Confidence 1100 00000 00000 011222210000 0111000 01124467789999
Q ss_pred HHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcC
Q 006778 217 WLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFK 296 (631)
Q Consensus 217 ~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g 296 (631)
.|.+.+++.|++|+.+++|+++..++ +.+ +|.+.+ | +++||.||+|+|.++. .+.+.++
T Consensus 169 ~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~-~v~~~~---------------g-~~~a~~vV~A~G~~s~---~l~~~~~ 227 (382)
T 1ryi_A 169 AYVKAAKMLGAEIFEHTPVLHVERDG-EAL-FIKTPS---------------G-DVWANHVVVASGVWSG---MFFKQLG 227 (382)
T ss_dssp HHHHHHHHTTCEEETTCCCCEEECSS-SSE-EEEETT---------------E-EEEEEEEEECCGGGTH---HHHHHTT
T ss_pred HHHHHHHHCCCEEEcCCcEEEEEEEC-CEE-EEEcCC---------------c-eEEcCEEEECCChhHH---HHHHhcC
Confidence 99999999999999999999998766 445 677765 5 7999999999999874 3445555
Q ss_pred CCcccccCCcceeeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEEcCCCCCCCCCcHHHHH
Q 006778 297 LREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQ 376 (631)
Q Consensus 297 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~~~~~~~~~~G~~~~~~~~~~~~~ig~~~~~d~~~~~~~~~~~~~ 376 (631)
... +....-|.....+.+.. .....+. . .+.|++|..++.+.+|........+.... .+..+
T Consensus 228 ~~~-----~~~~~~g~~~~~~~~~~--~~~~~~~-------~---~~~~~~p~~~g~~~vG~~~~~~~~~~~~~-~~~~~ 289 (382)
T 1ryi_A 228 LNN-----AFLPVKGECLSVWNDDI--PLTKTLY-------H---DHCYIVPRKSGRLVVGATMKPGDWSETPD-LGGLE 289 (382)
T ss_dssp CCC-----CCEEEEEEEEEEECCSS--CCCSEEE-------E---TTEEEEECTTSEEEEECCCEETCCCCSCC-HHHHH
T ss_pred CCC-----ceeccceEEEEECCCCC--CccceEE-------c---CCEEEEEcCCCeEEEeecccccCCCCCCC-HHHHH
Confidence 542 11111122212222211 1111211 0 13688898888888875432221111122 22222
Q ss_pred H----hh-cCcchhccccCCceeeecceeeccCCcccCCcccCCCEEEEccCC-----ccCCCCCCcchHHHHHHHHHHH
Q 006778 377 K----FK-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAA-----GFLNVPKIKGTHTAMKSGMLAA 446 (631)
Q Consensus 377 ~----~~-~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA-----~~~~P~~g~G~~~Al~sa~~aA 446 (631)
. +. ..|.+.. .+... .+.++. ....++..++|++. ....++.|.|+..|...|.++|
T Consensus 290 ~l~~~~~~~~p~l~~----~~~~~------~w~g~~---~~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la 356 (382)
T 1ryi_A 290 SVMKKAKTMLPAIQN----MKVDR------FWAGLR---PGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALIS 356 (382)
T ss_dssp HHHHHHHHHCGGGGG----SEEEE------EEEEEE---EECSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCcCC----Cceee------EEEEec---ccCCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHH
Confidence 2 21 2343322 12211 111222 33445667788753 3346788999999999999999
Q ss_pred HHHhcc
Q 006778 447 EAGFGV 452 (631)
Q Consensus 447 ~~l~~~ 452 (631)
+.|...
T Consensus 357 ~~i~~~ 362 (382)
T 1ryi_A 357 DLIMNK 362 (382)
T ss_dssp HHHTTC
T ss_pred HHHhCC
Confidence 998753
No 31
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.64 E-value=1.6e-14 Score=150.35 Aligned_cols=148 Identities=17% Similarity=0.232 Sum_probs=88.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccc----c-------cc--ChHhHHHHhhhhhhc
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISG----N-------VF--EPRALNELLPQWKQE 173 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g----~-------~i--~~~~l~~l~~~~~~~ 173 (631)
.+||+|||||++|+++|+.|++. |++|+||||.+.+|+..... . .+ ....+.+++..|...
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~------G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA------GHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQ 75 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHH
T ss_pred CceEEEECCcHHHHHHHHHHHHC------CCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhC
Confidence 57999999999999999999999 99999999998877654321 0 11 113344555555542
Q ss_pred CCCeeeeccCcceEeeccCCcccCCCCCCCCCcEEE--eHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEe
Q 006778 174 EAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVI--SLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGT 251 (631)
Q Consensus 174 ~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~v--~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~ 251 (631)
.... ... ..+..... ..+.. .......|.. ....+.+.|. + |++|+++++|+++..++++ + .|++
T Consensus 76 ~~~~--~~~-~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~l~~~l~----~-g~~i~~~~~v~~i~~~~~~-~-~v~~ 142 (336)
T 1yvv_A 76 GHVA--EWT-PLLYNFHA-GRLSP--SPDEQVRWVGKPGMSAITRAMR----G-DMPVSFSCRITEVFRGEEH-W-NLLD 142 (336)
T ss_dssp TSEE--EEC-CCEEEESS-SBCCC--CCTTSCEEEESSCTHHHHHHHH----T-TCCEECSCCEEEEEECSSC-E-EEEE
T ss_pred CCee--ecc-ccceeccC-ccccc--CCCCCccEEcCccHHHHHHHHH----c-cCcEEecCEEEEEEEeCCE-E-EEEe
Confidence 2111 011 11111111 11100 0001112221 1233333332 2 8999999999999988754 3 4666
Q ss_pred CCCccccCCCccccccCceEE-EcCEEEEecCCCCchh
Q 006778 252 NDMGIAKDGSKKENFQRGVEL-RGRITLLAEGCRGSLS 288 (631)
Q Consensus 252 ~d~g~~~~G~~~~~f~~g~~i-~a~~vV~A~G~~s~~~ 288 (631)
.+ |..+ .||+||+|+|.++.++
T Consensus 143 ~~---------------g~~~~~a~~vV~a~g~~~~~~ 165 (336)
T 1yvv_A 143 AE---------------GQNHGPFSHVIIATPAPQAST 165 (336)
T ss_dssp TT---------------SCEEEEESEEEECSCHHHHGG
T ss_pred CC---------------CcCccccCEEEEcCCHHHHHH
Confidence 65 4454 5999999999887654
No 32
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.62 E-value=3.5e-14 Score=150.71 Aligned_cols=293 Identities=17% Similarity=0.119 Sum_probs=153.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCcc--ccccccCh----HhH-------HHHhhhhhh
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI--ISGNVFEP----RAL-------NELLPQWKQ 172 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~--~~g~~i~~----~~l-------~~l~~~~~~ 172 (631)
.++||+|||||++|+++|+.|++. |++|+|||+.. ++... .+++.+.+ ... .+++..+..
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~------G~~V~lle~~~-~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~l~~ 76 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKR------GEEVTVIEKRF-IGSGSTFRCGTGIRQQFNDEANVRVMKRSVELWKKYSE 76 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSS-TTCSHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCC-CCCCccccccCeeeecCCChHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999 99999999985 44321 23333321 100 111222211
Q ss_pred c-CC-----Cee-eeccC-----------------cceEeeccCCc-ccCCCCC--------CCCCcEEEeHHHHHHHHH
Q 006778 173 E-EA-----PIR-VPVSS-----------------DKFWFLTKDRA-FSLPSPF--------SNRGNYVISLSQLVRWLG 219 (631)
Q Consensus 173 ~-~~-----~~~-~~~~~-----------------~~~~~l~~~~~-~~~p~~~--------~~~~~~~v~~~~l~~~L~ 219 (631)
. .. ... ..... ..+.+++...- -..|... .......++...+.+.|.
T Consensus 77 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 156 (382)
T 1y56_B 77 EYGFSFKQTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFA 156 (382)
T ss_dssp HHTCCEECCCEEEEECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHH
T ss_pred HhCCCeeccceEEEEeCHHHHHHHHHHHHHHHhcCCCcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHHHHH
Confidence 1 00 000 00000 00111211000 0011100 011234578899999999
Q ss_pred HHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCc
Q 006778 220 GKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLRE 299 (631)
Q Consensus 220 ~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~ 299 (631)
+.+++.|++|+.+++|+++..++ +.+.+|.+.+ | +++||.||+|+|.++. .+.+.++...
T Consensus 157 ~~~~~~Gv~i~~~~~v~~i~~~~-~~v~gv~~~~---------------g-~i~a~~VV~A~G~~s~---~l~~~~g~~~ 216 (382)
T 1y56_B 157 VKAKEYGAKLLEYTEVKGFLIEN-NEIKGVKTNK---------------G-IIKTGIVVNATNAWAN---LINAMAGIKT 216 (382)
T ss_dssp HHHHHTTCEEECSCCEEEEEESS-SBEEEEEETT---------------E-EEECSEEEECCGGGHH---HHHHHHTCCS
T ss_pred HHHHHCCCEEECCceEEEEEEEC-CEEEEEEECC---------------c-EEECCEEEECcchhHH---HHHHHcCCCc
Confidence 99999999999999999998876 5676788765 5 7999999999999863 3444455430
Q ss_pred ccccCCcceeeEEEEEEeecCCCCCCC-cEEEEeccCCCCCCcceEEEEEeCCCeEEEEEE-E-cCCCCCCCCCcHHHHH
Q 006778 300 KSHAQHQTYALGIKEVWEIDEGKHNPG-EILHTLGWPLDQKTYGGSFLYHMNDRQIALGLV-V-ALNYHNPFLNPYEEFQ 376 (631)
Q Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~~~~~g-~~~h~~~~~~~~~~~G~~~~~~~~~~~~~ig~~-~-~~d~~~~~~~~~~~~~ 376 (631)
..+....-|.-.. +........ ..+... . ..+.|+.|..++ +.+|.. . ..+..+.... .+..+
T Consensus 217 ---~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~----~---~~~~y~~p~~~g-~~iG~~~~~~~~~~~~~~~-~~~~~ 282 (382)
T 1y56_B 217 ---KIPIEPYKHQAVI--TQPIKRGTINPMVISF----K---YGHAYLTQTFHG-GIIGGIGYEIGPTYDLTPT-YEFLR 282 (382)
T ss_dssp ---CCCCEEEEEEEEE--ECCCSTTSSCSEEEES----T---TTTEEEECCSSS-CCEEECSCCBSSCCCCCCC-HHHHH
T ss_pred ---CcCCCeeEeEEEE--EccCCcccCCCeEEec----C---CCeEEEEEeCCe-EEEecCCCCCCCCCCCCCC-HHHHH
Confidence 0111111111111 111111111 222111 1 023577787777 666641 1 1111111122 22222
Q ss_pred Hh----h-cCcchhccccCCceeeecceeeccCCcccCCcccCCCEEEEccCC-----ccCCCCCCcchHHHHHHHHHHH
Q 006778 377 KF----K-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAA-----GFLNVPKIKGTHTAMKSGMLAA 446 (631)
Q Consensus 377 ~~----~-~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA-----~~~~P~~g~G~~~Al~sa~~aA 446 (631)
.+ . ..|.+. ..+... .+.|+. ....++..+||... .....+.|.|+.+|...|.++|
T Consensus 283 ~l~~~~~~~~p~l~----~~~~~~------~~~g~r---~~t~d~~p~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~~la 349 (382)
T 1y56_B 283 EVSYYFTKIIPALK----NLLILR------TWAGYY---AKTPDSNPAIGRIEELNDYYIAAGFSGHGFMMAPAVGEMVA 349 (382)
T ss_dssp HHHHHHHHHCGGGG----GSEEEE------EEEEEE---EECTTSCCEEEEESSSBTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcC----CCCceE------EEEecc---ccCCCCCcEeccCCCCCCEEEEEecCcchHhhhHHHHHHHH
Confidence 22 1 234332 122221 112222 22334555666543 1224567899999999999999
Q ss_pred HHHhcc
Q 006778 447 EAGFGV 452 (631)
Q Consensus 447 ~~l~~~ 452 (631)
+.|...
T Consensus 350 ~~i~~~ 355 (382)
T 1y56_B 350 ELITKG 355 (382)
T ss_dssp HHHHHS
T ss_pred HHHhCC
Confidence 988753
No 33
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.61 E-value=7e-14 Score=149.44 Aligned_cols=197 Identities=15% Similarity=0.101 Sum_probs=113.8
Q ss_pred EEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCc
Q 006778 207 YVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 207 ~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
..++...+.+.|.+.+++.|++|+++++|+++..++ +.+++|.+.+ | +++||.||+|+|.++.
T Consensus 169 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~~~v~~~~---------------g-~~~a~~vV~a~G~~s~ 231 (405)
T 2gag_B 169 GIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDG-EKVTGVKTTR---------------G-TIHAGKVALAGAGHSS 231 (405)
T ss_dssp BBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEEEEEETT---------------C-CEEEEEEEECCGGGHH
T ss_pred ccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeC-CEEEEEEeCC---------------c-eEECCEEEECCchhHH
Confidence 345677899999999999999999999999998875 5677888775 5 7899999999999862
Q ss_pred hhHHHHHHcCCCcccccCCcceeeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEEcC-CCC
Q 006778 287 LSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL-NYH 365 (631)
Q Consensus 287 ~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~~~~~~~~~~G~~~~~~~~~~~~~ig~~~~~-d~~ 365 (631)
.+.+.+++.. +.....+...+.+ +.......++.. .. +..|+.|..++.+.+|..... +..
T Consensus 232 ---~l~~~~g~~~-----~~~~~~~~~~~~~--~~~~~~~~~~~~------~~--~~~y~~p~~~g~~~ig~~~~~~~~~ 293 (405)
T 2gag_B 232 ---VLAEMAGFEL-----PIQSHPLQALVSE--LFEPVHPTVVMS------NH--IHVYVSQAHKGELVMGAGIDSYNGY 293 (405)
T ss_dssp ---HHHHHHTCCC-----CEEEEEEEEEEEE--EBCSCCCSEEEE------TT--TTEEEEECTTSEEEEEEEECSSCCC
T ss_pred ---HHHHHcCCCC-----CccccceeEEEec--CCccccCceEEe------CC--CcEEEEEcCCCcEEEEeccCCCCcc
Confidence 3444556542 1111111111111 111111112211 11 235788877888888866542 111
Q ss_pred CCCCCcHHHHHHh----h-cCcchhccccCCceeeecceeeccCCcccCCcccCCCEEEEccCC--c--cCCCCCCcchH
Q 006778 366 NPFLNPYEEFQKF----K-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAA--G--FLNVPKIKGTH 436 (631)
Q Consensus 366 ~~~~~~~~~~~~~----~-~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA--~--~~~P~~g~G~~ 436 (631)
+...+ .+..+.+ . ..|.+. ..+... .+.++. ....++..+||+.. + ....+.|.|+.
T Consensus 294 ~~~~~-~~~~~~l~~~~~~~~p~l~----~~~~~~------~w~g~~---~~t~d~~p~ig~~~~~~l~~~~G~~g~G~~ 359 (405)
T 2gag_B 294 GQRGA-FHVIQEQMAAAVELFPIFA----RAHVLR------TWGGIV---DTTMDASPIISKTPIQNLYVNCGWGTGGFK 359 (405)
T ss_dssp SSCCC-THHHHHHHHHHHHHCGGGG----GCEECE------EEEEEE---EEETTSCCEEEECSSBTEEEEECCGGGCST
T ss_pred ccCCC-HHHHHHHHHHHHHhCCccc----cCCcce------EEeecc---ccCCCCCCEecccCCCCEEEEecCCCchhh
Confidence 11122 1222222 1 234332 112111 111222 33456777888864 2 22445678999
Q ss_pred HHHHHHHHHHHHHhcc
Q 006778 437 TAMKSGMLAAEAGFGV 452 (631)
Q Consensus 437 ~Al~sa~~aA~~l~~~ 452 (631)
.|...|..+|+.|...
T Consensus 360 ~a~~~g~~la~~i~g~ 375 (405)
T 2gag_B 360 GTPGAGFTLAHTIAND 375 (405)
T ss_dssp THHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCC
Confidence 9999999999988753
No 34
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.59 E-value=3.3e-14 Score=149.65 Aligned_cols=170 Identities=18% Similarity=0.221 Sum_probs=104.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCcc--ccccccC------hHh----H----HHHhhh
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI--ISGNVFE------PRA----L----NELLPQ 169 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~--~~g~~i~------~~~----l----~~l~~~ 169 (631)
+++||+|||||++|+++|+.|++. |++|+||||.+.++... .+++++. ... + .+.+..
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~------G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAG------GHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYE 76 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSSCSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCCCCCCccCcCCccccccCccCCCCCHhHHHHHHHHHHHHH
Confidence 468999999999999999999999 99999999986554322 2222221 100 0 011222
Q ss_pred hhh-cCCCee------eeccCc------------------ceEeeccCCcc-cCCCC-----CCCCCcEEEeHHHHHHHH
Q 006778 170 WKQ-EEAPIR------VPVSSD------------------KFWFLTKDRAF-SLPSP-----FSNRGNYVISLSQLVRWL 218 (631)
Q Consensus 170 ~~~-~~~~~~------~~~~~~------------------~~~~l~~~~~~-~~p~~-----~~~~~~~~v~~~~l~~~L 218 (631)
+.. ...+.. ...... .+.+++..... ..|.. ........++...+.+.|
T Consensus 77 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 156 (369)
T 3dme_A 77 YCAARGVPHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAY 156 (369)
T ss_dssp HHHHHTCCEECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTTCCCSEEEEETTCEEECHHHHHHHH
T ss_pred HHHHcCCCcccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHHHHhCCCceeeeeeECCCCEEECHHHHHHHH
Confidence 111 111100 000000 01111110000 01110 011124457888999999
Q ss_pred HHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHc-CC
Q 006778 219 GGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNF-KL 297 (631)
Q Consensus 219 ~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~-g~ 297 (631)
.+.+++.|++|+++++|+++..++++.+ .|.+.+ |+ ..+++||.||+|+|.++ ..+.+.+ |+
T Consensus 157 ~~~~~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~------g~-------~~~~~a~~VV~A~G~~s---~~l~~~~~g~ 219 (369)
T 3dme_A 157 QGDAESDGAQLVFHTPLIAGRVRPEGGF-ELDFGG------AE-------PMTLSCRVLINAAGLHA---PGLARRIEGI 219 (369)
T ss_dssp HHHHHHTTCEEECSCCEEEEEECTTSSE-EEEECT------TS-------CEEEEEEEEEECCGGGH---HHHHHTEETS
T ss_pred HHHHHHCCCEEECCCEEEEEEEcCCceE-EEEECC------Cc-------eeEEEeCEEEECCCcch---HHHHHHhcCC
Confidence 9999999999999999999998875534 477665 21 15899999999999985 4666677 76
Q ss_pred C
Q 006778 298 R 298 (631)
Q Consensus 298 ~ 298 (631)
+
T Consensus 220 ~ 220 (369)
T 3dme_A 220 P 220 (369)
T ss_dssp C
T ss_pred C
Confidence 5
No 35
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.58 E-value=8.7e-14 Score=147.29 Aligned_cols=292 Identities=17% Similarity=0.097 Sum_probs=154.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCc--cccccccCh----HhHHHH----hhhhhhcCC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH--IISGNVFEP----RALNEL----LPQWKQEEA 175 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~--~~~g~~i~~----~~l~~l----~~~~~~~~~ 175 (631)
..+||+|||||++||++|+.|+ . |++|+|||+.+.+|+. ..+++.+.+ ....++ ...|.....
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~------G~~V~vlE~~~~~g~~as~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~ 80 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-A------HGRVVVLEREAQPGYHSTGRSAAHYTVAYGTPQVRALTAASRAFFDNPPA 80 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-T------TSCEEEECSSSSTTSSGGGSCCCEECSSSSCHHHHHHHHHHHHHHHSCCT
T ss_pred CcCCEEEECCcHHHHHHHHHHh-C------CCCEEEEECCCCccccccccccceeecccCCHHHHHHHHHHHHHHHHhhh
Confidence 4689999999999999999999 6 9999999999766532 233333321 111111 122222111
Q ss_pred Ce-e-eeccCcc--------------------------eEeeccCCc-ccCCCC--------CCCCCcEEEeHHHHHHHH
Q 006778 176 PI-R-VPVSSDK--------------------------FWFLTKDRA-FSLPSP--------FSNRGNYVISLSQLVRWL 218 (631)
Q Consensus 176 ~~-~-~~~~~~~--------------------------~~~l~~~~~-~~~p~~--------~~~~~~~~v~~~~l~~~L 218 (631)
.. . ....... +.+++...- -..|.. ........++...+.+.|
T Consensus 81 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~l 160 (381)
T 3nyc_A 81 GFCEHPLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQGY 160 (381)
T ss_dssp TSCSSCSEEECCEEEECSSCCHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHHHH
T ss_pred hhCCcccccccceEEEechHHHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHHHH
Confidence 00 0 0000000 111110000 001100 011124567889999999
Q ss_pred HHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCC
Q 006778 219 GGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (631)
Q Consensus 219 ~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~ 298 (631)
.+.+++.|++|+++++|+++..+++ . ++|++.+ | +++||.||+|+|.++ ..+.+.+++.
T Consensus 161 ~~~a~~~Gv~i~~~~~V~~i~~~~~-~-~~V~t~~---------------g-~i~a~~VV~A~G~~s---~~l~~~~g~~ 219 (381)
T 3nyc_A 161 LRGIRRNQGQVLCNHEALEIRRVDG-A-WEVRCDA---------------G-SYRAAVLVNAAGAWC---DAIAGLAGVR 219 (381)
T ss_dssp HHHHHHTTCEEESSCCCCEEEEETT-E-EEEECSS---------------E-EEEESEEEECCGGGH---HHHHHHHTCC
T ss_pred HHHHHHCCCEEEcCCEEEEEEEeCC-e-EEEEeCC---------------C-EEEcCEEEECCChhH---HHHHHHhCCC
Confidence 9999999999999999999998764 3 4688775 5 899999999999986 3555566654
Q ss_pred cccccCCcceeeEEEEEEeecCCCCCCC-cEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEEcCC--CCCCCCCcHH--
Q 006778 299 EKSHAQHQTYALGIKEVWEIDEGKHNPG-EILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALN--YHNPFLNPYE-- 373 (631)
Q Consensus 299 ~~~~~~~~~~~~g~~~~~~~~~~~~~~g-~~~h~~~~~~~~~~~G~~~~~~~~~~~~~ig~~~~~d--~~~~~~~~~~-- 373 (631)
. .+-...-|.......+....... ..+... . ++.|+.|.. +.+.+|-..... ..+.......
T Consensus 220 ~----~~~~p~rg~~~~~~~~~~~~~~~~p~~~~~-----~---~~~y~~p~~-g~~~ig~~~~~~~~~~~~~~~~~~~~ 286 (381)
T 3nyc_A 220 P----LGLQPKRRSAFIFAPPPGIDCHDWPMLVSL-----D---ESFYLKPDA-GMLLGSPANADPVEAHDVQPEQLDIA 286 (381)
T ss_dssp C----CCCEEEEEEEEEECCCTTCCCTTCCEEEET-----T---SSCEEEEET-TEEEEECCCCEECCSSCCCCCHHHHH
T ss_pred C----CceeeeEEEEEEECCCcCCCcCccceEEeC-----C---CCEEEEeCC-CcEEEeCCcCCCCCcccCCCChHHHH
Confidence 1 01111112222222222111111 111110 1 224677877 677666332110 0111111111
Q ss_pred -HHHHhhcCcchhccccCCceeeecceeeccCCcccCCcccCCCEEEEccCC-----ccCCCCCCcchHHHHHHHHHHHH
Q 006778 374 -EFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAA-----GFLNVPKIKGTHTAMKSGMLAAE 447 (631)
Q Consensus 374 -~~~~~~~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA-----~~~~P~~g~G~~~Al~sa~~aA~ 447 (631)
.++++...|. +...+... .+.|+. ....++..+||... .....+.|.|+.+|...|.++|+
T Consensus 287 ~~~~~~~~~~~----l~~~~~~~------~w~G~r---~~t~D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~ 353 (381)
T 3nyc_A 287 TGMYLIEEATT----LTIRRPEH------TWAGLR---SFVADGDLVAGYAANAEGFFWVAAQGGYGIQTSAAMGEASAA 353 (381)
T ss_dssp HHHHHHHHHBS----CCCCCCSE------EEEEEE---EECTTSCCEEEECTTSTTEEEEECCTTCTTTTHHHHHHHHHH
T ss_pred HHHHHHHhcCC----Ccccceee------eeEEcc---ccCCCCCceecCCCCCCCeEEEEcCCChhHhhCHHHHHHHHH
Confidence 1122222221 11111111 112222 34455666777643 22345678999999999999999
Q ss_pred HHhc
Q 006778 448 AGFG 451 (631)
Q Consensus 448 ~l~~ 451 (631)
.|..
T Consensus 354 ~i~g 357 (381)
T 3nyc_A 354 LIRH 357 (381)
T ss_dssp HHTT
T ss_pred HHhC
Confidence 8865
No 36
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.55 E-value=6.3e-14 Score=160.57 Aligned_cols=158 Identities=14% Similarity=0.080 Sum_probs=97.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCc--cccccccChH------hH-----------HHH
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH--IISGNVFEPR------AL-----------NEL 166 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~--~~~g~~i~~~------~l-----------~~l 166 (631)
.++||||||||++|+++|+.|++. |++|+||||...+|+. ..+++.+.+. .+ .++
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~------G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~ 336 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRR------GAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQ 336 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTT------TCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC------CCcEEEEeCCCccccccccccCCEEecCCCCCChHHHHHHHHHHHHHHHH
Confidence 358999999999999999999999 9999999998766532 2333333221 11 122
Q ss_pred hhhhhhcCCCee--------eeccC----------------cceEeeccCCc---ccCCCC---CCCCCcEEEeHHHHHH
Q 006778 167 LPQWKQEEAPIR--------VPVSS----------------DKFWFLTKDRA---FSLPSP---FSNRGNYVISLSQLVR 216 (631)
Q Consensus 167 ~~~~~~~~~~~~--------~~~~~----------------~~~~~l~~~~~---~~~p~~---~~~~~~~~v~~~~l~~ 216 (631)
+..+........ ..... +.+.+++.... ..++.. ........++...+.+
T Consensus 337 ~~~l~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~ 416 (689)
T 3pvc_A 337 YDQLLEQGIAFDHQWCGVSQLAFDDKSRGKIEKMLHTQWPVEFAEAMSREQLSELAGLDCAHDGIHYPAGGWLCPSDLTH 416 (689)
T ss_dssp HHHHHHTTCCCCEECCCEEEECCSHHHHHHHHHHTTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHH
T ss_pred HHHhhhhccccccccCceEEeccCHHHHHHHHHHHhcCCChHHhhccCHHHHHHhcCCCcccceEEecCCeEECHHHHHH
Confidence 222211111000 00000 00001110000 001100 0011244568899999
Q ss_pred HHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCce-EEEcCEEEEecCCCCc
Q 006778 217 WLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGV-ELRGRITLLAEGCRGS 286 (631)
Q Consensus 217 ~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~-~i~a~~vV~A~G~~s~ 286 (631)
.|.+.+++.|++|+++++|++++.++++ + .|.+.+ |. +++||.||+|+|.++.
T Consensus 417 aL~~~a~~~Gv~i~~~t~V~~l~~~~~~-v-~V~t~~---------------G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 417 ALMMLAQQNGMTCHYQHELQRLKRIDSQ-W-QLTFGQ---------------SQAAKHHATVILATGHRLP 470 (689)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEECSSS-E-EEEEC----------------CCCCEEESEEEECCGGGTT
T ss_pred HHHHHHHhCCCEEEeCCeEeEEEEeCCe-E-EEEeCC---------------CcEEEECCEEEECCCcchh
Confidence 9999999999999999999999988754 4 677765 55 7999999999999874
No 37
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.55 E-value=5.2e-14 Score=160.96 Aligned_cols=157 Identities=14% Similarity=0.129 Sum_probs=98.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCC--ccccccccCh------HhHHHH--------hhhh
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGA--HIISGNVFEP------RALNEL--------LPQW 170 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~--~~~~g~~i~~------~~l~~l--------~~~~ 170 (631)
.+||||||||++|+++|+.|++. |++|+||||...+|+ ...+++.+.+ ..+.++ ...|
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~------G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRR------GWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFY 345 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT------TCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHH
Confidence 48999999999999999999999 999999999866653 2233333332 111111 1112
Q ss_pred hhcCCCee--------ee----------------ccCcceEeeccCCc---ccCCCC---CCCCCcEEEeHHHHHHHHHH
Q 006778 171 KQEEAPIR--------VP----------------VSSDKFWFLTKDRA---FSLPSP---FSNRGNYVISLSQLVRWLGG 220 (631)
Q Consensus 171 ~~~~~~~~--------~~----------------~~~~~~~~l~~~~~---~~~p~~---~~~~~~~~v~~~~l~~~L~~ 220 (631)
........ .. ...+.+.+++.... ..++.. ........++...+.+.|.+
T Consensus 346 ~~l~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~ 425 (676)
T 3ps9_A 346 DQLPVKFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLE 425 (676)
T ss_dssp HHCCSCCCEECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHH
T ss_pred HHCCCCcCcCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHHH
Confidence 21111000 00 00000111111000 001100 01122455788999999999
Q ss_pred HHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCc
Q 006778 221 KAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 221 ~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
.+++.|++|+++++|+++..+++ .+ .|.+.+ |.+++||.||+|+|.++.
T Consensus 426 ~a~~~Gv~i~~~t~V~~l~~~~~-~v-~V~t~~---------------G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 426 LAQQQGLQIYYQYQLQNFSRKDD-CW-LLNFAG---------------DQQATHSVVVLANGHQIS 474 (676)
T ss_dssp HHHHTTCEEEESCCEEEEEEETT-EE-EEEETT---------------SCEEEESEEEECCGGGGG
T ss_pred HHHhCCCEEEeCCeeeEEEEeCC-eE-EEEECC---------------CCEEECCEEEECCCcchh
Confidence 99999999999999999998764 44 677765 567999999999999874
No 38
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.52 E-value=1.8e-13 Score=145.40 Aligned_cols=200 Identities=15% Similarity=0.100 Sum_probs=109.5
Q ss_pred cEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCC
Q 006778 206 NYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 206 ~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s 285 (631)
...++...+.+.|.+.+++.|++|+.+++|+++..++++ + .|.+.+ | +++||.||+|+|.++
T Consensus 144 ~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~-~v~~~~---------------g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 144 SGVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDS-V-KIETAN---------------G-SYTADKLIVSMGAWN 205 (389)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC-E-EEEETT---------------E-EEEEEEEEECCGGGH
T ss_pred CcEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe-E-EEEeCC---------------C-EEEeCEEEEecCccH
Confidence 345778899999999999999999999999999887644 3 466654 3 799999999999875
Q ss_pred chhHHHHHHcCCCcccccCCcceeeEEEEEEeecCCCCC---CCcEEEEeccCCCCCCcceEEEEEeCCC-eEEEEEEE-
Q 006778 286 SLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHN---PGEILHTLGWPLDQKTYGGSFLYHMNDR-QIALGLVV- 360 (631)
Q Consensus 286 ~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~g~~~h~~~~~~~~~~~G~~~~~~~~~~-~~~ig~~~- 360 (631)
..+.+.++... +-...-|....++.+..... .-....... . .+..|++|..++ .+.+|...
T Consensus 206 ---~~l~~~~g~~~-----pl~~~rg~~~~~~~~~~~~~~~~~~p~~~~~~----~--~~~~y~~p~~~g~~~~iG~~~~ 271 (389)
T 2gf3_A 206 ---SKLLSKLNLDI-----PLQPYRQVVGFFESDESKYSNDIDFPGFMVEV----P--NGIYYGFPSFGGCGLKLGYHTF 271 (389)
T ss_dssp ---HHHGGGGTEEC-----CCEEEEEEEEEECCCHHHHBGGGTCCEEEEEE----T--TEEEEEECBSTTCCEEEEESSC
T ss_pred ---HHHhhhhccCC-----ceEEEEEEEEEEecCcccccccccCCEEEEeC----C--CCcEEEcCCCCCCcEEEEEcCC
Confidence 34444444221 11111122112222110000 001111110 1 124677888777 77777422
Q ss_pred ----cCCCCCCCC--CcHHHHHHh----h-cCcchhccccCCceeeecceeeccCCcccCCcccCCCEEEEccCC-----
Q 006778 361 ----ALNYHNPFL--NPYEEFQKF----K-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAA----- 424 (631)
Q Consensus 361 ----~~d~~~~~~--~~~~~~~~~----~-~~p~i~~~l~~~~~~~~~~~~i~~gg~~~~p~~~~~~v~LiGDAA----- 424 (631)
..+..+... .+ +..+.+ + ..|.+. . +... .+.++. ....++..+||...
T Consensus 272 ~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~P~l~----~-~~~~------~w~g~r---~~t~D~~p~ig~~~~~~~l 336 (389)
T 2gf3_A 272 GQKIDPDTINREFGVYP-EDESNLRAFLEEYMPGAN----G-ELKR------GAVCMY---TKTLDEHFIIDLHPEHSNV 336 (389)
T ss_dssp CEECCTTTCCCCTTSSH-HHHHHHHHHHHHHCGGGC----S-CEEE------EEEEEE---EECTTSCCEEEEETTEEEE
T ss_pred CCccCcccccCccCCCH-HHHHHHHHHHHHhCCCCC----C-CceE------EEEEEe---ccCCCCCeEEccCCCCCCE
Confidence 111111112 22 222222 1 234332 1 2221 112222 23345666777642
Q ss_pred ccCCCCCCcchHHHHHHHHHHHHHHhcc
Q 006778 425 GFLNVPKIKGTHTAMKSGMLAAEAGFGV 452 (631)
Q Consensus 425 ~~~~P~~g~G~~~Al~sa~~aA~~l~~~ 452 (631)
.....+.|.|+.+|...|.++|+.|...
T Consensus 337 ~~a~G~~g~G~~~ap~~g~~la~~i~~~ 364 (389)
T 2gf3_A 337 VIAAGFSGHGFKFSSGVGEVLSQLALTG 364 (389)
T ss_dssp EEEECCTTCCGGGHHHHHHHHHHHHHHS
T ss_pred EEEECCccccccccHHHHHHHHHHHcCC
Confidence 2234566889999999999999988753
No 39
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.48 E-value=5.5e-12 Score=139.01 Aligned_cols=216 Identities=14% Similarity=0.010 Sum_probs=114.1
Q ss_pred EEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCc
Q 006778 207 YVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 207 ~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
..++...+...|.+.+++.|++|+.+++|+++..++ .+++|.+.|. .+|+ ..+++||.||+|+|.++.
T Consensus 144 g~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~---~~G~-------~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDI---DTGK-------KYSWQARGLVNATGPWVK 211 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEET---TTCC-------EEEEEESCEEECCGGGHH
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEEC---CCCC-------EEEEECCEEEECCChhHH
Confidence 347889999999999999999999999999998865 4667877430 1122 147999999999999863
Q ss_pred hhHHHHHH-cCCCcccccCCcceeeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEEcC---
Q 006778 287 LSEKLIKN-FKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL--- 362 (631)
Q Consensus 287 ~~~~l~~~-~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~~~~~~~~~~G~~~~~~~~~~~~~ig~~~~~--- 362 (631)
.+.+. ++... ..+-...-|...+.. .. ....... .+ +..++ ...|++|..++.+.+|.....
T Consensus 212 ---~l~~~~l~~~~---~~~i~p~rG~~~~~~--~~-~~~~~~~-~~--~~~dg--~~~~~~P~~~g~~~iG~t~~~~~~ 277 (501)
T 2qcu_A 212 ---QFFDDGMHLPS---PYGIRLIKGSHIVVP--RV-HTQKQAY-IL--QNEDK--RIVFVIPWMDEFSIIGTTDVEYKG 277 (501)
T ss_dssp ---HHHHHHTCCCC---SSCBCCEEEEEEEEE--CS-SSCSCEE-EE--ECTTS--CEEEEEEETTTEEEEECCCEECCS
T ss_pred ---HHHHHhccCCc---ccccccceeEEEEEC--CC-CCCceEE-Ee--ecCCC--CEEEEEEcCCCcEEEcCCCCCCCC
Confidence 44433 33320 011111112222222 11 1111111 11 11121 236888988777777744211
Q ss_pred CCCCCCCCcHHHHHHh----h-cCc-chhccccCCceee--ecceeeccCCcccCCcccCCCEEE--EccCCccCCCCCC
Q 006778 363 NYHNPFLNPYEEFQKF----K-HHP-AIKPLLEGGTVVQ--YGARTLNEGGLQSIPYPVFPGGAI--IGCAAGFLNVPKI 432 (631)
Q Consensus 363 d~~~~~~~~~~~~~~~----~-~~p-~i~~~l~~~~~~~--~~~~~i~~gg~~~~p~~~~~~v~L--iGDAA~~~~P~~g 432 (631)
+..++..++ +..+.+ . ..| .+ ...+.+. .|.|.+...+.....+...+.++. .++..+-+-...|
T Consensus 278 ~~~~~~~~~-~~~~~l~~~~~~~~p~~l----~~~~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~G 352 (501)
T 2qcu_A 278 DPKAVKIEE-SEINYLLNVYNTHFKKQL----SRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFG 352 (501)
T ss_dssp CGGGCCCCH-HHHHHHHHHHHHHBSSCC----CGGGCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEEC
T ss_pred CcCCCCCCH-HHHHHHHHHHHHhcCCCC----CcccEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeC
Confidence 111222222 222222 1 123 22 1112221 133333332221112233355665 5665454445667
Q ss_pred cchHHHHHHHHHHHHHHhccc
Q 006778 433 KGTHTAMKSGMLAAEAGFGVL 453 (631)
Q Consensus 433 ~G~~~Al~sa~~aA~~l~~~l 453 (631)
.|+.++-.-|..+++.+.+.+
T Consensus 353 g~~t~~~~~Ae~~~~~~~~~~ 373 (501)
T 2qcu_A 353 GKLTTYRKLAEHALEKLTPYY 373 (501)
T ss_dssp CCGGGHHHHHHHHHHHHGGGS
T ss_pred ccccchHHHHHHHHHHHHHhh
Confidence 788887777777777776654
No 40
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.48 E-value=4.9e-12 Score=141.18 Aligned_cols=217 Identities=13% Similarity=0.104 Sum_probs=112.8
Q ss_pred EEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCch
Q 006778 208 VISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 287 (631)
Q Consensus 208 ~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~ 287 (631)
.++...+...|.+.+++.|++|+++++|+++..++ +.+++|++.| ..+|+ +.+++||.||.|+|.++
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~-g~v~gV~~~d---~~tg~-------~~~i~A~~VV~AaG~~s-- 232 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQ-GKVVGVVAKD---RLTDT-------THTIYAKKVVNAAGPWV-- 232 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEET-TEEEEEEEEE---TTTCC-------EEEEEEEEEEECCGGGH--
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC-CeEEEEEEEE---cCCCc-------eEEEECCEEEECCCcch--
Confidence 57789999999999999999999999999999875 6777888765 12333 36899999999999986
Q ss_pred hHHHHHHcCCCcccccCCcceeeEEEEEEeecCCCCCCCcEEEEeccCCCCCCcceEEEEEeCCCeEEEEEEEc---CCC
Q 006778 288 SEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVA---LNY 364 (631)
Q Consensus 288 ~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~h~~~~~~~~~~~G~~~~~~~~~~~~~ig~~~~---~d~ 364 (631)
..+.+..+... ..+....-|...+. +.........+. +..+ ..+ ...|++|. ++.+.||.... .+.
T Consensus 233 -~~l~~~~g~~~---~~~v~p~kG~~lvl--~~~~~~~~~~~~-~~~~-~dg--r~v~~iP~-~g~~~iGtT~~~~~~~~ 301 (561)
T 3da1_A 233 -DTLREKDRSKH---GKYLKLSKGVHLVV--DQSRFPLRQAVY-FDTE-SDG--RMIFAIPR-EGKTYIGTTDTFYDKDI 301 (561)
T ss_dssp -HHHHHTTTCCC---SSEEEEEEEEEEEE--EGGGSCCSSEEE-ECCS-SSC--CCEEEEEE-TTEEEECCCCEEECSCT
T ss_pred -HHHHHhcCCCC---CceEEeccEEEEEE--CCccCCCceEEE-eccC-CCC--cEEEEEec-CCCEEEcCCCCccCCCc
Confidence 34544555541 11112222333222 221111222221 1111 122 12578898 56777774321 122
Q ss_pred CCCCCCcHHHHHHhh-----cCcchhccccCCceee--ecceeeccCCcccCCcccCCCEEEEccCCccCCCCCCcchHH
Q 006778 365 HNPFLNPYEEFQKFK-----HHPAIKPLLEGGTVVQ--YGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHT 437 (631)
Q Consensus 365 ~~~~~~~~~~~~~~~-----~~p~i~~~l~~~~~~~--~~~~~i~~gg~~~~p~~~~~~v~LiGDAA~~~~P~~g~G~~~ 437 (631)
.++..++. +.+.+. ..|.+. +.....+. .|.|.+...+-......+.+.++..+ ..+.++-+.|+ +.+
T Consensus 302 ~~~~~t~~-~i~~ll~~~~~~~P~l~--~~~~~v~~~~aGlRPl~~~~~~~~~~~sR~~~i~~~-~~gli~i~Ggk-~Tt 376 (561)
T 3da1_A 302 ASPRMTVE-DRDYILAAANYMFPSLR--LTADDVESSWAGLRPLIHEEGKKASEISRKDEIFFS-DSGLISIAGGK-LTG 376 (561)
T ss_dssp TCCCCCHH-HHHHHHHHHHHHCTTCC--CCTTTEEEEEEEEEEEEEC-----------CCEEEC-SSCCEEECCCC-STT
T ss_pred CCCCCCHH-HHHHHHHHHHHhCCCCC--CChhhEEEEeEEeccccCCCCCCccccccceEEEec-CCCeEEEeCCh-hhh
Confidence 23333332 223221 122221 11222222 13343322210111122334445554 47888888887 666
Q ss_pred HHHHHHHHHHHHhccc
Q 006778 438 AMKSGMLAAEAGFGVL 453 (631)
Q Consensus 438 Al~sa~~aA~~l~~~l 453 (631)
+..-|..+.+.+.+.+
T Consensus 377 ~r~mAe~~~d~~~~~~ 392 (561)
T 3da1_A 377 YRKMAERTVDAVAQGL 392 (561)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 6666666666555443
No 41
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.46 E-value=3.7e-12 Score=135.93 Aligned_cols=72 Identities=25% Similarity=0.290 Sum_probs=55.8
Q ss_pred cEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCC
Q 006778 206 NYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 206 ~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s 285 (631)
...++...+.+.|.+.+++.|++|+++++|+++..+++ .+ .|.+.+ | +++||.||+|+|.++
T Consensus 147 ~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~-~v-~v~t~~---------------g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 147 GGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDAD-GV-SVTTDR---------------G-TYRAGKVVLACGPYT 208 (397)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETT-EE-EEEESS---------------C-EEEEEEEEECCGGGH
T ss_pred CCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCC-eE-EEEECC---------------C-EEEcCEEEEcCCcCh
Confidence 44678888999999999999999999999999988763 34 466554 3 799999999999885
Q ss_pred chhHHHHHHcCCC
Q 006778 286 SLSEKLIKNFKLR 298 (631)
Q Consensus 286 ~~~~~l~~~~g~~ 298 (631)
..+.+.++..
T Consensus 209 ---~~l~~~~g~~ 218 (397)
T 2oln_A 209 ---NDLLEPLGAR 218 (397)
T ss_dssp ---HHHHGGGTCC
T ss_pred ---HHHhhhcCCC
Confidence 2344455543
No 42
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.46 E-value=2.6e-12 Score=139.53 Aligned_cols=74 Identities=16% Similarity=0.244 Sum_probs=58.7
Q ss_pred cEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEc--------------CCCcEEEEEeCCCccccCCCccccccCceE
Q 006778 206 NYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYD--------------ADNKVIGIGTNDMGIAKDGSKKENFQRGVE 271 (631)
Q Consensus 206 ~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~--------------~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~ 271 (631)
...++...+.+.|.+.+++.|++|+.+++|+++..+ +++.+++|.+.+ | +
T Consensus 175 ~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~---------------g-~ 238 (448)
T 3axb_A 175 AGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSD---------------G-T 238 (448)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETT---------------S-C
T ss_pred CeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCC---------------C-E
Confidence 345677899999999999999999999999999872 335676788765 5 6
Q ss_pred E--EcCEEEEecCCCCchhHHHHHHcCCC
Q 006778 272 L--RGRITLLAEGCRGSLSEKLIKNFKLR 298 (631)
Q Consensus 272 i--~a~~vV~A~G~~s~~~~~l~~~~g~~ 298 (631)
+ +||.||+|+|.++ ..+.+.+++.
T Consensus 239 i~~~Ad~VV~AtG~~s---~~l~~~~g~~ 264 (448)
T 3axb_A 239 RVEVGEKLVVAAGVWS---NRLLNPLGID 264 (448)
T ss_dssp EEEEEEEEEECCGGGH---HHHHGGGTCC
T ss_pred EeecCCEEEECCCcCH---HHHHHHcCCC
Confidence 8 9999999999985 3555555554
No 43
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.43 E-value=1.4e-11 Score=135.69 Aligned_cols=62 Identities=16% Similarity=0.146 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCchhH
Q 006778 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSE 289 (631)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~ 289 (631)
..|.+.|.+.+++.|++|+++++|++|+.++ +++++|++.| |.++.||.||.+.+.....+.
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~-~~~~gV~~~~---------------g~~~~ad~VV~~a~~~~~~~~ 282 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTG-NKIEAVHLED---------------GRRFLTQAVASNADVVHTYRD 282 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETT---------------SCEEECSCEEECCC-------
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeC-CeEEEEEecC---------------CcEEEcCEEEECCCHHHHHHH
Confidence 5788889999999999999999999999887 6788999988 789999999999987765443
No 44
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.43 E-value=1.1e-12 Score=135.75 Aligned_cols=158 Identities=22% Similarity=0.346 Sum_probs=103.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHh-----HHHHhhhhhhcCCCeeee
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRA-----LNELLPQWKQEEAPIRVP 180 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~-----l~~l~~~~~~~~~~~~~~ 180 (631)
.++||+|||||++||++|+.|++. .+|++|+|||+...+|+.+..++.+.... ..+++..+. .+..
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~----~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~G---v~~~-- 148 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTL----RPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVG---VPYE-- 148 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHH----CTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHT---CCCE--
T ss_pred CcCCEEEECccHHHHHHHHHHHhc----CCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcC---Cccc--
Confidence 469999999999999999999985 24999999999988776443222211100 011111111 0000
Q ss_pred ccCcceEeeccCCcccCCCCCCCCCcEEE--eHHHHHHHHHHHHHh-cCcEEecCceEEEEEEcCC--------------
Q 006778 181 VSSDKFWFLTKDRAFSLPSPFSNRGNYVI--SLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDAD-------------- 243 (631)
Q Consensus 181 ~~~~~~~~l~~~~~~~~p~~~~~~~~~~v--~~~~l~~~L~~~a~~-~Gv~i~~g~~v~~i~~~~~-------------- 243 (631)
..+.|.. +...+.+.|.+.+.+ .|++++.++.|++++.+++
T Consensus 149 ----------------------~~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~ 206 (344)
T 3jsk_A 149 ----------------------DEGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAE 206 (344)
T ss_dssp ----------------------ECSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC--------------
T ss_pred ----------------------ccCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccc
Confidence 0012222 356778899999988 5999999999999988763
Q ss_pred --C--cEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHc
Q 006778 244 --N--KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNF 295 (631)
Q Consensus 244 --g--~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~ 295 (631)
+ +|.+|.+....+..+|..+... ++.+|+|++||+|||..+.+++.+.+++
T Consensus 207 ~~g~~rV~GVv~~~~~v~~~g~~~~~~-d~~~i~Ak~VV~ATG~~s~v~~~~~~~l 261 (344)
T 3jsk_A 207 DEAKVRIAGVVTNWTLVSMHHDDQSAM-DPNTINAPVIISTTGHDGPFGAFSVKRL 261 (344)
T ss_dssp --CCEEEEEEEEEEHHHHTTSSSSSCC-BCEEEECSEEEECCCSSSSSSCHHHHHH
T ss_pred cCCCceEeEEEeeeeeeeccCCccccc-CceEEEcCEEEECCCCCchhhHHHHHHH
Confidence 3 7788877532222233211111 2478999999999999999877765553
No 45
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.42 E-value=1.2e-12 Score=146.46 Aligned_cols=198 Identities=20% Similarity=0.226 Sum_probs=115.5
Q ss_pred cCccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCcc-ccccccCh------------HhHHHHhhhh
Q 006778 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI-ISGNVFEP------------RALNELLPQW 170 (631)
Q Consensus 104 ~~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~-~~g~~i~~------------~~l~~l~~~~ 170 (631)
...++||||||||++||++|+.|++. |++|+||||.+.+|+.+ .+++.+.. ....+++..+
T Consensus 118 ~~~~~DVvVVG~G~aGl~aA~~la~~------G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~ 191 (566)
T 1qo8_A 118 PSETTQVLVVGAGSAGFNASLAAKKA------GANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDA 191 (566)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHH------TCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHH
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHC------CCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHH
Confidence 34579999999999999999999999 99999999999887654 23333311 0011111111
Q ss_pred hhcCCCee----e----eccCcceEeeccCCcccCCC-----CCCCCCcE-----EEeHHHHHHHHHHHHHhcCcEEecC
Q 006778 171 KQEEAPIR----V----PVSSDKFWFLTKDRAFSLPS-----PFSNRGNY-----VISLSQLVRWLGGKAEELGVEIYPG 232 (631)
Q Consensus 171 ~~~~~~~~----~----~~~~~~~~~l~~~~~~~~p~-----~~~~~~~~-----~v~~~~l~~~L~~~a~~~Gv~i~~g 232 (631)
........ . ....+.+.|+.. .++.+.. .......+ .+....+.+.|.+.+++.||+|+++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~-~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~ 270 (566)
T 1qo8_A 192 MKGGRQQNDIKLVTILAEQSADGVQWLES-LGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLN 270 (566)
T ss_dssp HHHTTTCSCHHHHHHHHHHHHHHHHHHHH-TTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECS
T ss_pred HHhcCCCCCHHHHHHHHhccHHHHHHHHh-cCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeC
Confidence 11000000 0 000000111110 0111100 00000011 1346788999999999999999999
Q ss_pred ceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCc---ccccCCccee
Q 006778 233 FAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLRE---KSHAQHQTYA 309 (631)
Q Consensus 233 ~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~---~~~~~~~~~~ 309 (631)
++|++++.+++++|++|.+.+ .+|+. .+++||.||+|+|.++.+++ |.+.|.... .....+...|
T Consensus 271 ~~v~~l~~~~~g~v~Gv~~~~----~~g~~-------~~i~A~~VVlAtGg~s~~~~-~~~~~~p~~~~~~~~~~~~~tG 338 (566)
T 1qo8_A 271 SRVVKLVVNDDHSVVGAVVHG----KHTGY-------YMIGAKSVVLATGGYGMNKE-MIAYYRPTMKDMTSSNNITATG 338 (566)
T ss_dssp EEEEEEEECTTSBEEEEEEEE----TTTEE-------EEEEEEEEEECCCCCTTCHH-HHHHHCGGGTTCEECSCTTCSC
T ss_pred CEEEEEEECCCCcEEEEEEEe----CCCcE-------EEEEcCEEEEecCCcccCHH-HHHHhCccccCCcccCCCCCCc
Confidence 999999887647888887753 22321 37999999999999999755 445553221 0122344556
Q ss_pred eEEEEEEeecC
Q 006778 310 LGIKEVWEIDE 320 (631)
Q Consensus 310 ~g~~~~~~~~~ 320 (631)
.|+++.+.+..
T Consensus 339 dg~~~a~~~Ga 349 (566)
T 1qo8_A 339 DGVLMAKEIGA 349 (566)
T ss_dssp HHHHHHHHTTB
T ss_pred HHHHHHHHcCC
Confidence 66655444443
No 46
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.42 E-value=3.3e-12 Score=141.12 Aligned_cols=96 Identities=24% Similarity=0.253 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcC-EEEEecCCCCchhHHH
Q 006778 213 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGR-ITLLAEGCRGSLSEKL 291 (631)
Q Consensus 213 ~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~-~vV~A~G~~s~~~~~l 291 (631)
.+.+.|.+.+++.|++|+++++|++++.+++++|++|.+.+ +|+ ..+++|+ .||+|+|.++... +|
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~-----~g~-------~~~i~A~k~VVlAtGG~~~n~-~m 269 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ-----YGK-------EVAVRARRGVVLATGSFAYND-KM 269 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEE-----TTE-------EEEEEEEEEEEECCCCCTTCH-HH
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEE-----CCc-------EEEEEeCCeEEEeCCChhhCH-HH
Confidence 78999999999999999999999999998668898988754 121 1479995 9999999999854 45
Q ss_pred HHHcCCCcc---cccCCcceeeEEEEEEeecCC
Q 006778 292 IKNFKLREK---SHAQHQTYALGIKEVWEIDEG 321 (631)
Q Consensus 292 ~~~~g~~~~---~~~~~~~~~~g~~~~~~~~~~ 321 (631)
.+++..... ....+...|.|+++.+.+...
T Consensus 270 ~~~~~p~~~~~~~~~~~~~tGdGi~ma~~~Ga~ 302 (510)
T 4at0_A 270 IEAHAPRLIGRPGAAIEEHDGRSILMAQALGAD 302 (510)
T ss_dssp HHHHCGGGTTCBCCSCTTCCCHHHHHHHTTTBC
T ss_pred HHHhCccccCCCCCCCCCCCHHHHHHHHHhCcC
Confidence 555533210 112345566776665555443
No 47
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.41 E-value=2.4e-12 Score=144.30 Aligned_cols=197 Identities=20% Similarity=0.170 Sum_probs=113.7
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCcc-ccccccCh---H---------hHHHHhhhhh
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI-ISGNVFEP---R---------ALNELLPQWK 171 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~-~~g~~i~~---~---------~l~~l~~~~~ 171 (631)
..++||||||||+|||++|+.|++. |++|+||||.+.+|+.+ .+++.+.. . ....++.++.
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~------G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~ 197 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDS------GAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTM 197 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHC------CCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHH
Confidence 3468999999999999999999999 99999999999887654 23332210 0 0111111111
Q ss_pred hcCCCee----e----eccCcceEeeccCCcccCCC-----CCCCCCcEE-----EeHHHHHHHHHHHHHhcCcEEecCc
Q 006778 172 QEEAPIR----V----PVSSDKFWFLTKDRAFSLPS-----PFSNRGNYV-----ISLSQLVRWLGGKAEELGVEIYPGF 233 (631)
Q Consensus 172 ~~~~~~~----~----~~~~~~~~~l~~~~~~~~p~-----~~~~~~~~~-----v~~~~l~~~L~~~a~~~Gv~i~~g~ 233 (631)
....... . ....+.+.|+.. .++.+.. .......+. .....+.+.|.+.+++.||+|++++
T Consensus 198 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~ 276 (571)
T 1y0p_A 198 KGGQNINDPALVKVLSSHSKDSVDWMTA-MGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNT 276 (571)
T ss_dssp HHTTTCSCHHHHHHHHHHHHHHHHHHHH-TTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSE
T ss_pred HhcCCCCCHHHHHHHHHccHHHHHHHHh-cCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCC
Confidence 0000000 0 000000111110 0111100 000000111 2357889999999999999999999
Q ss_pred eEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCc---ccccCCcceee
Q 006778 234 AASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLRE---KSHAQHQTYAL 310 (631)
Q Consensus 234 ~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~---~~~~~~~~~~~ 310 (631)
+|++++.+++++|++|.+.+ .+|+. .+++||.||+|+|.++..++ |.+.|.... .....+...|.
T Consensus 277 ~v~~l~~~~~g~v~Gv~~~~----~~g~~-------~~i~a~~VVlAtGg~~~n~~-~~~~~~p~~~~~~~~~~~~~tGd 344 (571)
T 1y0p_A 277 RGIEVLKDDKGTVKGILVKG----MYKGY-------YWVKADAVILATGGFAKNNE-RVAKLDPSLKGFISTNQPGAVGD 344 (571)
T ss_dssp EEEEEEECTTSCEEEEEEEE----TTTEE-------EEEECSEEEECCCCCTTCHH-HHHHHCGGGTTCCBCSCTTCSSH
T ss_pred EeeEeEEcCCCeEEEEEEEe----CCCcE-------EEEECCeEEEeCCCcccCHH-HHHHhCccccCCcccCCCCCchH
Confidence 99999987657888887653 12321 37999999999999998654 444443210 01234445566
Q ss_pred EEEEEEeecC
Q 006778 311 GIKEVWEIDE 320 (631)
Q Consensus 311 g~~~~~~~~~ 320 (631)
|+++.+.+..
T Consensus 345 g~~~a~~~Ga 354 (571)
T 1y0p_A 345 GLDVAENAGG 354 (571)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 6655544443
No 48
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.40 E-value=3.2e-12 Score=138.29 Aligned_cols=64 Identities=22% Similarity=0.299 Sum_probs=56.7
Q ss_pred EEEeHHHHHHHHHHHHHhcCcEEecCc---eEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCC
Q 006778 207 YVISLSQLVRWLGGKAEELGVEIYPGF---AASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGC 283 (631)
Q Consensus 207 ~~v~~~~l~~~L~~~a~~~Gv~i~~g~---~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~ 283 (631)
..++...+.+.|.+.+++.|++|++++ +|++|..++ +.+.+|++.+ |.+++||.||+|+|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~-~~v~gV~t~~---------------G~~i~Ad~VV~AtG~ 219 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN-NDVKGAVTAD---------------GKIWRAERTFLCAGA 219 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET-TEEEEEEETT---------------TEEEECSEEEECCGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC-CeEEEEEECC---------------CCEEECCEEEECCCC
Confidence 567778999999999999999999999 999998865 5787899887 678999999999999
Q ss_pred CCc
Q 006778 284 RGS 286 (631)
Q Consensus 284 ~s~ 286 (631)
++.
T Consensus 220 ~s~ 222 (438)
T 3dje_A 220 SAG 222 (438)
T ss_dssp GGG
T ss_pred Chh
Confidence 873
No 49
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.40 E-value=1.5e-12 Score=129.39 Aligned_cols=41 Identities=34% Similarity=0.499 Sum_probs=37.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~ 152 (631)
|.+||+|||||||||+||+.|++. |++|+||||++.+|+.+
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~------G~~V~v~Ek~~~~GG~~ 41 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAA------GHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCGGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCCCCCCcc
Confidence 578999999999999999999999 99999999999998764
No 50
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.39 E-value=2.3e-12 Score=139.99 Aligned_cols=169 Identities=21% Similarity=0.293 Sum_probs=102.2
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccc-cccc---c-ChHhHHHHhhhhhhcCCCee-
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII-SGNV---F-EPRALNELLPQWKQEEAPIR- 178 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~-~g~~---i-~~~~l~~l~~~~~~~~~~~~- 178 (631)
.+++||||||||++|+++|+.|++. |++|+||||.+.+|..+. +|+. + +.....+++..+........
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~------G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEE------GANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYS 97 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHH
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHC------CCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHH
Confidence 4579999999999999999999999 999999999987765431 2211 0 00111111111110000000
Q ss_pred ---eeccCcceEeeccCCcccCCCCCCCCCcEEE----eHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEe
Q 006778 179 ---VPVSSDKFWFLTKDRAFSLPSPFSNRGNYVI----SLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGT 251 (631)
Q Consensus 179 ---~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~v----~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~ 251 (631)
.....+.+.++.. .++.+. . ...+.+. ....+.+.|.+.+++.||+|+++++|+++..++ +.+++|.+
T Consensus 98 ~~~~~~~~~~~~~~~~-~G~~~~--~-~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~-~~v~~V~~ 172 (447)
T 2i0z_A 98 AFSIFNNEDIITFFEN-LGVKLK--E-EDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN-GQTKAVIL 172 (447)
T ss_dssp HHHHSCHHHHHHHHHH-TTCCEE--E-CGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEE
T ss_pred HHHhcCHHHHHHHHHh-cCCceE--E-eeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC-CcEEEEEE
Confidence 0000000011110 000000 0 0112222 257888999999999999999999999998765 66678888
Q ss_pred CCCccccCCCccccccCceEEEcCEEEEecCCCCchh-------HHHHHHcCCCc
Q 006778 252 NDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLS-------EKLIKNFKLRE 299 (631)
Q Consensus 252 ~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~-------~~l~~~~g~~~ 299 (631)
.+ |.+++||.||+|+|.+|.-. ..+.+.+|+..
T Consensus 173 ~~---------------G~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~~ 212 (447)
T 2i0z_A 173 QT---------------GEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTI 212 (447)
T ss_dssp TT---------------CCEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCCE
T ss_pred CC---------------CCEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCCc
Confidence 76 56799999999999998211 24555667663
No 51
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.38 E-value=3.2e-12 Score=137.31 Aligned_cols=157 Identities=23% Similarity=0.323 Sum_probs=97.7
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccc-ccc--c------cChH--------hHHHHh
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII-SGN--V------FEPR--------ALNELL 167 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~-~g~--~------i~~~--------~l~~l~ 167 (631)
+.++||+|||||++|+++|+.|++. |++|+|||+.+.+|+... +|+ + ..+. .+...+
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~------G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l 98 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKR------GRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSAL 98 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC------CCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHH
Confidence 3568999999999999999999999 999999999998775431 111 1 0110 000000
Q ss_pred hhhhhcCCCeeeeccCcceEeeccCCcccCCCCCCCCCcE--EEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCc
Q 006778 168 PQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNY--VISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNK 245 (631)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~--~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~ 245 (631)
..+.. .+...++.. .++ +......+.. ......+.+.|.+.+++.||+|+++++|+++..++++
T Consensus 99 ~~~~~----------~~~~~~~~~-~Gi--~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~- 164 (417)
T 3v76_A 99 ARYRP----------QDFVALVER-HGI--GWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASG- 164 (417)
T ss_dssp HHSCH----------HHHHHHHHH-TTC--CEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTE-
T ss_pred HhcCH----------HHHHHHHHH-cCC--CcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCE-
Confidence 00000 000000000 000 0000001111 1346788999999999999999999999999887643
Q ss_pred EEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCch-------hHHHHHHcCCC
Q 006778 246 VIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL-------SEKLIKNFKLR 298 (631)
Q Consensus 246 v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~-------~~~l~~~~g~~ 298 (631)
+.|.+.+ | +++||.||+|+|.+|.- ...+.+.+|+.
T Consensus 165 -~~V~~~~---------------g-~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~~ 207 (417)
T 3v76_A 165 -FRVTTSA---------------G-TVDAASLVVASGGKSIPKMGATGLAYRIAEQFGLP 207 (417)
T ss_dssp -EEEEETT---------------E-EEEESEEEECCCCSSCGGGTCCCHHHHHHHHTTCC
T ss_pred -EEEEECC---------------c-EEEeeEEEECCCCccCCCCCCCcHHHHHHHHCCCC
Confidence 4677776 5 89999999999999831 24566667766
No 52
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.37 E-value=2.3e-11 Score=130.38 Aligned_cols=167 Identities=16% Similarity=0.158 Sum_probs=95.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCcc-cccc-cc-ChH--------hHHHHhhhhhhcC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI-ISGN-VF-EPR--------ALNELLPQWKQEE 174 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~-~~g~-~i-~~~--------~l~~l~~~~~~~~ 174 (631)
..+||||||||++|+++|+.|++. .||++|+|||+....++.+ .+++ .+ .+. ...+-+..|....
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~----~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~ 110 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQL----APGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGAL 110 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHH----CTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGG
T ss_pred CcCCEEEECCcHHHHHHHHHHHhc----CCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHh
Confidence 358999999999999999999986 3589999999986443322 2233 23 111 1111122233210
Q ss_pred CCe--eeeccCcce-E---------eeccCC-cccC---------CCC---CCCCCcEEEeHHHHHHHHHHHHHhcCcEE
Q 006778 175 API--RVPVSSDKF-W---------FLTKDR-AFSL---------PSP---FSNRGNYVISLSQLVRWLGGKAEELGVEI 229 (631)
Q Consensus 175 ~~~--~~~~~~~~~-~---------~l~~~~-~~~~---------p~~---~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i 229 (631)
.. ...+..... . +++... ...+ +.. ........++...+.+.|.+.+++.|++|
T Consensus 111 -~~~~~~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i 189 (405)
T 3c4n_A 111 -GSGKTLEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGL 189 (405)
T ss_dssp -GSSCCCCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEE
T ss_pred -CCCCCCcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEE
Confidence 00 000000000 0 111000 0000 000 01122456788999999999999999999
Q ss_pred ecCceEE---------EEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCchhHHHHH-HcCCC
Q 006778 230 YPGFAAS---------EILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIK-NFKLR 298 (631)
Q Consensus 230 ~~g~~v~---------~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~-~~g~~ 298 (631)
+++++|+ ++..++ +.+ +|.+.+ | +++||.||+|+|.++ ..+.+ .+++.
T Consensus 190 ~~~~~v~~~~g~~~~~~i~~~~-~~v-~v~~~~---------------g-~i~a~~VV~A~G~~s---~~l~~~~~g~~ 247 (405)
T 3c4n_A 190 LLNTRAELVPGGVRLHRLTVTN-THQ-IVVHET---------------R-QIRAGVIIVAAGAAG---PALVEQGLGLH 247 (405)
T ss_dssp ECSCEEEEETTEEEEECBCC---------CBCC---------------E-EEEEEEEEECCGGGH---HHHHHHHHCCC
T ss_pred EcCCEEEeccccccccceEeeC-CeE-EEEECC---------------c-EEECCEEEECCCccH---HHHHHHhcCCC
Confidence 9999998 776654 344 566554 4 799999999999986 23333 45654
No 53
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.36 E-value=5.2e-12 Score=139.60 Aligned_cols=160 Identities=18% Similarity=0.275 Sum_probs=99.6
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCC---------
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEA--------- 175 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~--------- 175 (631)
.+.+|||||||||+||++|+.|++. |++|+|||+++.++.... .....|.....
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~------G~kV~VlEr~~~~~~R~~-----------~~~g~w~~~~~~~~~~i~~g 167 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQM------GFNPIIVERGKEVRERTK-----------DTFGFWRKRTLNPESNVQFG 167 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHT------TCCCEEECSSCCHHHHHH-----------HHHHHHHHCCCCTTSSSSSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC------CCeEEEEEccCccccccc-----------chhcccccccccccccceec
Confidence 3468999999999999999999999 999999999876532110 00001111000
Q ss_pred ----------CeeeeccCcc------eEeec-cCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEE
Q 006778 176 ----------PIRVPVSSDK------FWFLT-KDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEI 238 (631)
Q Consensus 176 ----------~~~~~~~~~~------~~~l~-~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i 238 (631)
.+........ +.++. ......+..... ..........+.+.|.+.+++.|++|+++++|+++
T Consensus 168 ~gGag~~sdgkl~~~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~-p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I 246 (549)
T 3nlc_A 168 EGGAGTFSDGKLYSQVKDPNFYGRKVITEFVEAGAPEEILYVSK-PHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDL 246 (549)
T ss_dssp TTGGGTTSCCCCCCCSCCTTCHHHHHHHHHHHTTCCGGGGTBSS-CCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEE
T ss_pred cCCcccccCCceEEEeccccccHHHHHHHHHHcCCCceEeeccc-cccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEE
Confidence 0000000000 00000 000000000000 00011245778888999999999999999999999
Q ss_pred EEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCC
Q 006778 239 LYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (631)
Q Consensus 239 ~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~ 298 (631)
..++ +.+++|.+.+ |.++.||.||+|+|.++.....+....|+.
T Consensus 247 ~~~~-~~v~gV~l~~---------------G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~ 290 (549)
T 3nlc_A 247 HMED-GQITGVTLSN---------------GEEIKSRHVVLAVGHSARDTFEMLHERGVY 290 (549)
T ss_dssp EESS-SBEEEEEETT---------------SCEEECSCEEECCCTTCHHHHHHHHHTTCC
T ss_pred EEeC-CEEEEEEECC---------------CCEEECCEEEECCCCChhhHHHHHHHcCCC
Confidence 8876 5677898876 678999999999999996444456667766
No 54
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.36 E-value=3.5e-12 Score=129.96 Aligned_cols=146 Identities=23% Similarity=0.331 Sum_probs=95.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccc-cccccChH----hHHHHhhhhhhcCCCeeee
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII-SGNVFEPR----ALNELLPQWKQEEAPIRVP 180 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~-~g~~i~~~----~l~~l~~~~~~~~~~~~~~ 180 (631)
.++||+|||||++|+++|+.|++. +|++|+||||.+.+++... ++..+... ...+++..+ +
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~-----~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~---G------ 103 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKN-----PNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEI---G------ 103 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTS-----TTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHH---T------
T ss_pred cccCEEEECccHHHHHHHHHHHHc-----CCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHc---C------
Confidence 468999999999999999999983 2899999999988765332 22211110 000111111 0
Q ss_pred ccCcceEeeccCCcccCCCCCCCCCcEEE--eHHHHHHHHHHHHHh-cCcEEecCceEEEEEEcCCCcEEEEEeCCC---
Q 006778 181 VSSDKFWFLTKDRAFSLPSPFSNRGNYVI--SLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDM--- 254 (631)
Q Consensus 181 ~~~~~~~~l~~~~~~~~p~~~~~~~~~~v--~~~~l~~~L~~~a~~-~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~--- 254 (631)
++. ...+.+.+ +...+...|.+.+.+ .|++++++++|+++..++ +.+.+|.+.+.
T Consensus 104 ----------------~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~-~~v~gv~~~~~~~~ 164 (284)
T 1rp0_A 104 ----------------VAY--DEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-NRVGGVVTNWALVA 164 (284)
T ss_dssp ----------------CCC--EECSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEET-TEEEEEEEEEHHHH
T ss_pred ----------------CCc--ccCCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecC-CeEEEEEEeccccc
Confidence 010 00123333 667888888888876 699999999999998765 56767776420
Q ss_pred -c--cccCCCccccccCceEEEcCEEEEecCCCCchhHHH
Q 006778 255 -G--IAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKL 291 (631)
Q Consensus 255 -g--~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l 291 (631)
. ...+|+ ..++.||.||+|+|.+|.++...
T Consensus 165 ~~~~~g~~g~-------~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 165 QNHHTQSCMD-------PNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp TCTTTSSCCC-------CEEEEEEEEEECCCSSSTTTTHH
T ss_pred cccCccccCc-------eEEEECCEEEECCCCchHHHHHH
Confidence 0 001122 26799999999999998776543
No 55
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.35 E-value=4e-12 Score=125.51 Aligned_cols=126 Identities=24% Similarity=0.273 Sum_probs=87.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
+++||+|||||++|+++|+.|++. |.+|+|||+.....+ ..+...+.......+++.+
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~------g~~v~lie~~~~~~G-~~~~~~~~~~~~~~~~~~~--------------- 59 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQK------GVRVGLLTQSLDAVM-MPFLPPKPPFPPGSLLERA--------------- 59 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT------TCCEEEEESCGGGTT-CCSSCCCSCCCTTCHHHHH---------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEecCCCcCC-cccCccccccchhhHHhhh---------------
Confidence 368999999999999999999999 999999999843211 1110000000000000000
Q ss_pred eEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhc-CcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccc
Q 006778 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (631)
Q Consensus 186 ~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~-Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~ 264 (631)
++ ..+. ++..+.++|.+.+++. |++++ +++|+++..++ +.+++|.+.+
T Consensus 60 ----~d-----------~~g~---~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~-~~v~~v~~~~----------- 108 (232)
T 2cul_A 60 ----YD-----------PKDE---RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEG-NRVVGVRTWE----------- 108 (232)
T ss_dssp ----CC-----------TTCC---CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET-TEEEEEEETT-----------
T ss_pred ----cc-----------CCCC---CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC-CEEEEEEECC-----------
Confidence 00 0111 6788999999999987 99998 57999998765 5676788776
Q ss_pred cccCceEEEcCEEEEecCCCCchh
Q 006778 265 NFQRGVELRGRITLLAEGCRGSLS 288 (631)
Q Consensus 265 ~f~~g~~i~a~~vV~A~G~~s~~~ 288 (631)
|.+++||.||+|+|.++..+
T Consensus 109 ----g~~i~a~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 109 ----GPPARGEKVVLAVGSFLGAR 128 (232)
T ss_dssp ----SCCEECSEEEECCTTCSSCE
T ss_pred ----CCEEECCEEEECCCCChhhc
Confidence 56899999999999987543
No 56
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.33 E-value=1.9e-11 Score=130.65 Aligned_cols=157 Identities=20% Similarity=0.303 Sum_probs=97.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccc-cc--cc------cChH--------hHHHHhh
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII-SG--NV------FEPR--------ALNELLP 168 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~-~g--~~------i~~~--------~l~~l~~ 168 (631)
.++||+|||||++|+++|+.|++. |++|+||||++.+|.... +| .+ ..+. .+...+.
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~------G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~ 76 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKL------GKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALA 76 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhC------CCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHH
Confidence 368999999999999999999999 999999999987765331 11 11 0000 0000000
Q ss_pred hhhhcCCCeeeeccCcceEeeccCCcccCCCCCCCCCcEEE---eHHHHHHHHHHHHHhcCcEEecCceEEEEEEcC---
Q 006778 169 QWKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVI---SLSQLVRWLGGKAEELGVEIYPGFAASEILYDA--- 242 (631)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~v---~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~--- 242 (631)
.+. ..+.+.++. ..++.+ ..... +... ....+.+.|.+.+++.||+|+++++|+++..++
T Consensus 77 ~~~----------~~~~~~~~~-~~Gi~~--~~~~~-g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~ 142 (401)
T 2gqf_A 77 RYT----------NWDFISLVA-EQGITY--HEKEL-GQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDE 142 (401)
T ss_dssp HSC----------HHHHHHHHH-HTTCCE--EECST-TEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCS
T ss_pred hCC----------HHHHHHHHH-hCCCce--EECcC-CEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcC
Confidence 000 000000000 000000 00001 1112 567888999999999999999999999998762
Q ss_pred CCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCch-------hHHHHHHcCCCc
Q 006778 243 DNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL-------SEKLIKNFKLRE 299 (631)
Q Consensus 243 ~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~-------~~~l~~~~g~~~ 299 (631)
++.+ .|.+.+ | +++||.||+|+|.+|.- ...+.+.+|+..
T Consensus 143 ~~~~-~v~~~~---------------g-~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i 189 (401)
T 2gqf_A 143 KVRF-VLQVNS---------------T-QWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPV 189 (401)
T ss_dssp SCCE-EEEETT---------------E-EEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCE
T ss_pred CCeE-EEEECC---------------C-EEECCEEEECCCCccCCCCCCChHHHHHHHHCCCCc
Confidence 2333 577665 4 79999999999999842 235666777763
No 57
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.32 E-value=1e-11 Score=138.93 Aligned_cols=197 Identities=19% Similarity=0.206 Sum_probs=113.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCcc-ccccccCh------------HhHHHHhhhhhh
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI-ISGNVFEP------------RALNELLPQWKQ 172 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~-~~g~~i~~------------~~l~~l~~~~~~ 172 (631)
..+||+|||+|++||++|+.|++. |++|+|+||.+.+|+.+ .+++.+.. .....++.++..
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~------g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~ 198 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDA------GAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMK 198 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSS------SCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHH
Confidence 468999999999999999999999 99999999999887654 23322210 001111111111
Q ss_pred cCCCee----e----eccCcceEeeccCCcccCCC-----CCCCCCcE-----EEeHHHHHHHHHHHHHhcCcEEecCce
Q 006778 173 EEAPIR----V----PVSSDKFWFLTKDRAFSLPS-----PFSNRGNY-----VISLSQLVRWLGGKAEELGVEIYPGFA 234 (631)
Q Consensus 173 ~~~~~~----~----~~~~~~~~~l~~~~~~~~p~-----~~~~~~~~-----~v~~~~l~~~L~~~a~~~Gv~i~~g~~ 234 (631)
...... . ....+.+.|+.. .++.+.. .......+ ......+.+.|.+.+++.||+|+++++
T Consensus 199 ~g~~~~~~~~v~~~~~~~~~~i~~l~~-~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~ 277 (572)
T 1d4d_A 199 GGRNINDPELVKVLANNSSDSIDWLTS-MGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSR 277 (572)
T ss_dssp HTTTCSCHHHHHHHHHTHHHHHHHHHH-HTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEE
T ss_pred hcCCCCCHHHHHHHHHccHHHHHHHHh-cCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCE
Confidence 000000 0 000000111110 0111100 00000011 123568889999999999999999999
Q ss_pred EEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCCc---ccccCCcceeeE
Q 006778 235 ASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLRE---KSHAQHQTYALG 311 (631)
Q Consensus 235 v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~~---~~~~~~~~~~~g 311 (631)
|++++.+++++|++|.+.+ .+|+. .++.||.||+|+|.++..+ +|.+.+.... .....+...|.|
T Consensus 278 v~~l~~~~~g~v~GV~~~~----~~G~~-------~~i~A~~VVlAtGg~~~~~-~~~~~~~p~~~~~~~~~~~~~tGdg 345 (572)
T 1d4d_A 278 VVRILEDASGKVTGVLVKG----EYTGY-------YVIKADAVVIAAGGFAKNN-ERVSKYDPKLKGFKATNHPGATGDG 345 (572)
T ss_dssp EEEEEEC--CCEEEEEEEE----TTTEE-------EEEECSEEEECCCCCTTCH-HHHHHHCGGGTTCCBSSCTTCSSHH
T ss_pred EEEEEECCCCeEEEEEEEe----CCCcE-------EEEEcCEEEEeCCCCccCH-HHHHHhCccccCCCccCCCCCccHH
Confidence 9999877547788887753 22321 4799999999999999865 4555554321 012344556666
Q ss_pred EEEEEeecCC
Q 006778 312 IKEVWEIDEG 321 (631)
Q Consensus 312 ~~~~~~~~~~ 321 (631)
+++.+.+...
T Consensus 346 i~~a~~~Ga~ 355 (572)
T 1d4d_A 346 LDVALQAGAA 355 (572)
T ss_dssp HHHHHHTTBC
T ss_pred HHHHHHcCCe
Confidence 6655554443
No 58
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.31 E-value=1.4e-11 Score=126.82 Aligned_cols=163 Identities=21% Similarity=0.326 Sum_probs=100.4
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCc
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (631)
..++||+|||||++||++|+.|++. ++|++|+|+|+.+.+|+....++.+....+ ...+
T Consensus 63 ~~~~dv~IiG~G~aGl~aA~~la~~----~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~-----------------~~~~ 121 (326)
T 2gjc_A 63 FAVSDVIIVGAGSSGLSAAYVIAKN----RPDLKVCIIESSVAPGGGSWLGGQLFSAMV-----------------MRKP 121 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHH----CTTSCEEEECSSSSCCTTTTCCGGGCCCEE-----------------EETT
T ss_pred cCcCCEEEECccHHHHHHHHHHHhc----CCCCeEEEEecCccccccccccCcccchhh-----------------hhhH
Confidence 3568999999999999999999986 358999999999888764433322111000 0000
Q ss_pred ceEeeccCCcccCCCCCCCCCcEEE--eHHHHHHHHHHHHHhc-CcEEecCceEEEEEEcC--C-C--cEEEEEeCCCcc
Q 006778 185 KFWFLTKDRAFSLPSPFSNRGNYVI--SLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDA--D-N--KVIGIGTNDMGI 256 (631)
Q Consensus 185 ~~~~l~~~~~~~~p~~~~~~~~~~v--~~~~l~~~L~~~a~~~-Gv~i~~g~~v~~i~~~~--~-g--~v~gV~~~d~g~ 256 (631)
...++. ..++.+. ..+.+.+ +...+...|.+.+.+. |++++.++.|++++.++ + + +|.||.+....+
T Consensus 122 ~~~~L~-~~Gv~~~----~~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v 196 (326)
T 2gjc_A 122 AHLFLQ-ELEIPYE----DEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLV 196 (326)
T ss_dssp THHHHH-HTTCCCE----ECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHH
T ss_pred HHHHHH-hhCcccc----cCCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceee
Confidence 000000 0000000 0022222 3567788899988885 99999999999999875 3 5 788988753222
Q ss_pred ccCCCccccccCceEEEc---------------CEEEEecCCCCchhHHHHHH
Q 006778 257 AKDGSKKENFQRGVELRG---------------RITLLAEGCRGSLSEKLIKN 294 (631)
Q Consensus 257 ~~~G~~~~~f~~g~~i~a---------------~~vV~A~G~~s~~~~~l~~~ 294 (631)
..+|...... ++.++.| |+||+|||..+.+...+.++
T Consensus 197 ~~~g~~~~~~-d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~~~ 248 (326)
T 2gjc_A 197 TQAHGTQCCM-DPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKR 248 (326)
T ss_dssp HTC---CCCC-CCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHHHH
T ss_pred cccccceecc-CceEEEEeeccccccccccccCCEEEECcCCCchHHHHHHhh
Confidence 2333111111 2478999 99999999998887766544
No 59
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.31 E-value=9.7e-12 Score=129.89 Aligned_cols=130 Identities=16% Similarity=0.296 Sum_probs=90.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.+||+|||||++|+++|+.|++. |++|+|||+.+.+|+.+... |.. ..........
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~------g~~v~vie~~~~~gg~~~~~--------------~~~----~~~~~~~~~~ 58 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS------GLSYVILDAEASPGGAWQHA--------------WHS----LHLFSPAGWS 58 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS------SCCEEEECCSSSSSGGGGGS--------------CTT----CBCSSCGGGS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCCCCCCcccCC--------------CCC----cEecCchhhh
Confidence 58999999999999999999999 99999999998887643210 000 0000000000
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
.+ ..+..+ .......++..+.++|.+.+++.|++++++++|+++..+++ .+.+|.+.+
T Consensus 59 ~~----~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~v~~~~------------- 116 (357)
T 4a9w_A 59 SI----PGWPMP----ASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGE-RLRVVARDG------------- 116 (357)
T ss_dssp CC----SSSCCC----CCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETT-EEEEEETTS-------------
T ss_pred hC----CCCCCC----CCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCC-cEEEEEeCC-------------
Confidence 00 000011 11223356789999999999999999999999999988763 332277665
Q ss_pred cCceEEEcCEEEEecCCCC
Q 006778 267 QRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s 285 (631)
| ++.+|.||+|+|.++
T Consensus 117 --g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 117 --R-QWLARAVISATGTWG 132 (357)
T ss_dssp --C-EEEEEEEEECCCSGG
T ss_pred --C-EEEeCEEEECCCCCC
Confidence 5 899999999999865
No 60
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.31 E-value=9.3e-12 Score=138.75 Aligned_cols=149 Identities=16% Similarity=0.265 Sum_probs=94.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC-CCCCccccc---cccChHhHHHHhhhhhhcCCCeeeec
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA-EVGAHIISG---NVFEPRALNELLPQWKQEEAPIRVPV 181 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~-~~g~~~~~g---~~i~~~~l~~l~~~~~~~~~~~~~~~ 181 (631)
.+|||||||||+||++||+.|++. |++|+|||+.. .+|. ..+. +.+....+.+.+..+. .......
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~------G~kVlLIEk~~~~iG~-~~Cnps~ggia~~~lv~ei~alg---g~~~~~~ 96 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARM------GQQTLLLTHNIDTLGQ-MSCNPAIGGIGKGHLVKEVDALG---GLMAKAI 96 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESCGGGTTC-CSSSSEEESTTHHHHHHHHHHTT---CSHHHHH
T ss_pred CcCCEEEECChHHHHHHHHHHHhC------CCCEEEEeeccccccc-ccccccccchhhHHHHHHHHHhc---cHHHHHh
Confidence 369999999999999999999999 99999999974 3442 1111 1111111222122111 1000000
Q ss_pred cCc--ceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHh-cCcEEecCceEEEEEEcCCCcEEEEEeCCCcccc
Q 006778 182 SSD--KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAK 258 (631)
Q Consensus 182 ~~~--~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~-~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~ 258 (631)
... .+..+..... + ......+.+++..+.+.|.+.+++ .|++|+ +..|+++..++ +.|++|.+.+
T Consensus 97 d~~gi~f~~l~~~kg---p--av~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~-g~V~GV~t~d----- 164 (651)
T 3ces_A 97 DQAGIQFRILNASKG---P--AVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVEN-DRVVGAVTQM----- 164 (651)
T ss_dssp HHHEEEEEEESTTSC---G--GGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESS-SBEEEEEETT-----
T ss_pred hhcccchhhhhcccC---c--ccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecC-CEEEEEEECC-----
Confidence 001 1112211110 0 000013467888999999999988 699995 67899998765 6788898876
Q ss_pred CCCccccccCceEEEcCEEEEecCCCCc
Q 006778 259 DGSKKENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 259 ~G~~~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.+++||.||+|||.++.
T Consensus 165 ----------G~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 165 ----------GLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp ----------SEEEEEEEEEECCSTTTC
T ss_pred ----------CCEEECCEEEEcCCCCcc
Confidence 678999999999999863
No 61
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.29 E-value=1e-09 Score=117.88 Aligned_cols=58 Identities=19% Similarity=0.196 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCc
Q 006778 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
..+.+.|.+.+++.|++|+++++|++|..++ +++++|.+. |.+++||.||.|+|.+..
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~~~gv~~~----------------g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIEN-GKAAGIIAD----------------DRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEET----------------TEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEEC-CEEEEEEEC----------------CEEEECCEEEECCCHHHH
Confidence 5577888899999999999999999999876 567778764 478999999999997653
No 62
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.29 E-value=1.7e-11 Score=136.11 Aligned_cols=149 Identities=17% Similarity=0.251 Sum_probs=93.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC-CCCCccc--cccccChHhHHHHhhhhhhcCCCeeeecc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA-EVGAHII--SGNVFEPRALNELLPQWKQEEAPIRVPVS 182 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~-~~g~~~~--~g~~i~~~~l~~l~~~~~~~~~~~~~~~~ 182 (631)
.+|||||||||+||++||+.|++. |++|+|||+.. .+|.... +-+.+....+.+.+..+. ........
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~------G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalg---g~~~~~~d 96 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARM------GAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALG---GEMGKAID 96 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHT------TCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHT---CSHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCCEEEEEecccccCCcCccccccccchHHHHHHHHHhh---hHHHHHhh
Confidence 369999999999999999999999 99999999984 3443110 101111112211111111 00000000
Q ss_pred Cc--ceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHh-cCcEEecCceEEEEEEcCCCcEEEEEeCCCccccC
Q 006778 183 SD--KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKD 259 (631)
Q Consensus 183 ~~--~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~-~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~ 259 (631)
.. .+..+....+... ....+.+++..+.+.|.+.+++ .|++|+ +..|+++..++ +.|++|.+.+
T Consensus 97 ~~gi~f~~l~~~kGpav-----~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~-g~V~GV~t~d------ 163 (637)
T 2zxi_A 97 QTGIQFKMLNTRKGKAV-----QSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKN-NQVVGVRTNL------ 163 (637)
T ss_dssp HHEEEEEEESTTSCGGG-----CEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESS-SBEEEEEETT------
T ss_pred hcccceeecccccCccc-----cchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecC-CEEEEEEECC------
Confidence 01 1111111110000 0013467889999999999988 599995 67999998765 6788898876
Q ss_pred CCccccccCceEEEcCEEEEecCCCC
Q 006778 260 GSKKENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 260 G~~~~~f~~g~~i~a~~vV~A~G~~s 285 (631)
|.++.||.||+|||.++
T Consensus 164 ---------G~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 164 ---------GVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp ---------SCEEECSEEEECCTTCB
T ss_pred ---------CcEEEeCEEEEccCCCc
Confidence 67899999999999874
No 63
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.28 E-value=1.2e-10 Score=126.75 Aligned_cols=48 Identities=38% Similarity=0.556 Sum_probs=37.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~ 153 (631)
+.+||+|||||++||++|+.|++...+..|+++|+|+|+++.+|+.+.
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~ 51 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQ 51 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEE
Confidence 358999999999999999999999100011299999999988887543
No 64
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.27 E-value=2.3e-11 Score=135.62 Aligned_cols=151 Identities=16% Similarity=0.240 Sum_probs=93.1
Q ss_pred cCccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC-CCCCccc--cccccChHhHHHHhhhhhhcCCCeeee
Q 006778 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA-EVGAHII--SGNVFEPRALNELLPQWKQEEAPIRVP 180 (631)
Q Consensus 104 ~~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~-~~g~~~~--~g~~i~~~~l~~l~~~~~~~~~~~~~~ 180 (631)
+..+|||||||||+||++||+.|++. |.+|+|||+.. .+|.... +-+.+....+.+.+..+.. .....
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr~------G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g---~~~~~ 88 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVARG------GLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGG---EMGKA 88 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTC---SHHHH
T ss_pred ccCcCCEEEECccHHHHHHHHHHHHC------CCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhccc---HHHHH
Confidence 44579999999999999999999999 99999999985 3443110 0011111111111111111 00000
Q ss_pred ccCc--ceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhc-CcEEecCceEEEEEEcCCCcEEEEEeCCCccc
Q 006778 181 VSSD--KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTNDMGIA 257 (631)
Q Consensus 181 ~~~~--~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~-Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~ 257 (631)
.... .+..+..... |. . ....+.+++..+.+.|.+.+++. |++|+ +..|+++..++ +.|.+|.+.+
T Consensus 89 ~d~~gi~f~~l~~~kg---pa-v-~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~-g~V~GV~t~~---- 157 (641)
T 3cp8_A 89 IDATGIQFRMLNRSKG---PA-M-HSPRAQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANS-GKFSSVTVRS---- 157 (641)
T ss_dssp HHHHEEEEEEECSSSC---TT-T-CEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET-TEEEEEEETT----
T ss_pred HHhcCCchhhcccccC---cc-c-cchhhhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecC-CEEEEEEECC----
Confidence 0001 1111211110 00 0 01134688999999999999884 99996 45899988765 6787888876
Q ss_pred cCCCccccccCceEEEcCEEEEecCCCC
Q 006778 258 KDGSKKENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 258 ~~G~~~~~f~~g~~i~a~~vV~A~G~~s 285 (631)
|.++.||.||+|||.++
T Consensus 158 -----------G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 158 -----------GRAIQAKAAILACGTFL 174 (641)
T ss_dssp -----------SCEEEEEEEEECCTTCB
T ss_pred -----------CcEEEeCEEEECcCCCC
Confidence 67899999999999874
No 65
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.27 E-value=1.7e-11 Score=129.26 Aligned_cols=62 Identities=21% Similarity=0.209 Sum_probs=52.3
Q ss_pred cEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCC
Q 006778 206 NYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 206 ~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s 285 (631)
...++...+.+.|.+.+++.|++|+.+++|+++..++++ + .|.+.+ | +++||.||+|+|.++
T Consensus 143 ~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~-~-~v~~~~---------------g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 143 SGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG-V-TIETAD---------------G-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-E-EEEESS---------------C-EEEEEEEEECCGGGG
T ss_pred CcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE-E-EEEECC---------------C-eEEcCEEEEcCCccH
Confidence 455778899999999999999999999999999887643 4 577665 4 599999999999886
No 66
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.26 E-value=4.8e-11 Score=133.79 Aligned_cols=90 Identities=19% Similarity=0.250 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCchhHHH
Q 006778 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKL 291 (631)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l 291 (631)
..+.+.|.+++++.||+|++++.|++++.+++++|.+|.+.+ ..+|+. .++.||.||+|+|.++.+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~---~~~g~~-------~~i~A~~VVlAtGg~~~~---- 208 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALC---IETGEV-------VYFKARATVLATGGAGRI---- 208 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEE---TTTCCE-------EEEEEEEEEECCCCCGGG----
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEE---cCCCeE-------EEEEcCEEEECCCCCccc----
Confidence 678889999999999999999999999986457888887642 022321 479999999999999863
Q ss_pred HHHcCCCcccccCCcceeeEEEEEEeecCC
Q 006778 292 IKNFKLREKSHAQHQTYALGIKEVWEIDEG 321 (631)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~ 321 (631)
|... ...+...|.|+.+.+.+...
T Consensus 209 ---y~~~---~~~~~~tGdG~~ma~~aGa~ 232 (588)
T 2wdq_A 209 ---YQST---TNAHINTGDGVGMAIRAGVP 232 (588)
T ss_dssp ---SSSB---SSCTTCCCHHHHHHHHTTCC
T ss_pred ---cCCc---CCCCCchHHHHHHHHHcCCC
Confidence 2111 22344566666655554443
No 67
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.26 E-value=4.9e-10 Score=120.44 Aligned_cols=55 Identities=20% Similarity=0.124 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCC
Q 006778 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s 285 (631)
..+.+.|.+.+++.|++|+++++|++|..++ +.+ |. .+ |.++.||.||.|+|.+.
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~v--V~-~~---------------g~~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEE-KKV--YT-RD---------------NEEYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTT-TEE--EE-TT---------------CCEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEEC-CEE--EE-eC---------------CcEEEeCEEEECCCHHH
Confidence 4677888888899999999999999998765 444 53 33 56899999999999764
No 68
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.24 E-value=8e-11 Score=132.32 Aligned_cols=90 Identities=18% Similarity=0.206 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCchhHH
Q 006778 211 LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEK 290 (631)
Q Consensus 211 ~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~ 290 (631)
...+...|.+++.+.||+|+.++.|++++.++ ++|.||.+.+ ..+|+. ..+.||.||+|+|.++.+
T Consensus 154 G~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~-g~v~Gv~~~~---~~~G~~-------~~i~A~~VVlATGG~~~~--- 219 (621)
T 2h88_A 154 GHSLLHTLYGRSLRYDTSYFVEYFALDLLMEN-GECRGVIALC---IEDGTI-------HRFRAKNTVIATGGYGRT--- 219 (621)
T ss_dssp HHHHHHHHHHHHTTSCCEEEETEEEEEEEEET-TEEEEEEEEE---TTTCCE-------EEEEEEEEEECCCCCGGG---
T ss_pred HHHHHHHHHHHHHhCCCEEEEceEEEEEEEEC-CEEEEEEEEE---cCCCcE-------EEEEcCeEEECCCccccc---
Confidence 35788999999999999999999999998864 7888887643 123332 479999999999999864
Q ss_pred HHHHcCCCcccccCCcceeeEEEEEEeecCC
Q 006778 291 LIKNFKLREKSHAQHQTYALGIKEVWEIDEG 321 (631)
Q Consensus 291 l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~ 321 (631)
|... ...+...|.|+.+.+.+...
T Consensus 220 ----y~~~---t~~~~~tGdG~~mA~raGa~ 243 (621)
T 2h88_A 220 ----YFSC---TSAHTSTGDGTAMVTRAGLP 243 (621)
T ss_dssp ----SSSB---SSCTTCCCHHHHHHHHTTCC
T ss_pred ----cCCc---CCCCCCChHHHHHHHHcCCC
Confidence 2111 23344556666655555443
No 69
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.23 E-value=1.5e-10 Score=121.89 Aligned_cols=37 Identities=30% Similarity=0.445 Sum_probs=33.9
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
.+++||+|||||++|+++|+.|++. |++|+||||...
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~------G~~V~vle~~~~ 40 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARK------GYSVHILARDLP 40 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC------CCEEEEEeccCC
Confidence 4568999999999999999999999 999999999763
No 70
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.23 E-value=4.9e-11 Score=132.36 Aligned_cols=134 Identities=21% Similarity=0.293 Sum_probs=95.2
Q ss_pred ccccEEEECCCHHHHHHHHHHH-hhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCe-eeeccC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLK-QLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPI-RVPVSS 183 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La-~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~-~~~~~~ 183 (631)
+.+||||||||++|+++|+.|+ +. |++|+|||+++.+|+.+.. ...|- ...+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~------G~~v~viE~~~~~GGtw~~------------------~~ypg~~~d~~s 62 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHEL------GLTTVGFDKADGPGGTWYW------------------NRYPGALSDTES 62 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT------CCCEEEEESSSSSCTHHHH------------------CCCTTCEEEEEG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcC------CCCEEEEECCCCCCCcccc------------------cCCCCceecCCc
Confidence 4689999999999999999999 87 9999999999988874321 11110 000000
Q ss_pred cceEeeccCCcccCCC---CCCCCCcEEEeHHHHHHHHHHHHHhcCc--EEecCceEEEEEEcCCCcEEEEEeCCCcccc
Q 006778 184 DKFWFLTKDRAFSLPS---PFSNRGNYVISLSQLVRWLGGKAEELGV--EIYPGFAASEILYDADNKVIGIGTNDMGIAK 258 (631)
Q Consensus 184 ~~~~~l~~~~~~~~p~---~~~~~~~~~v~~~~l~~~L~~~a~~~Gv--~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~ 258 (631)
..+ .+.+.. ..........++.++.++|.+.+++.|+ .|+++++|+++..++++..+.|.+.+
T Consensus 63 ~~~-------~~~~~~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~----- 130 (540)
T 3gwf_A 63 HLY-------RFSFDRDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDH----- 130 (540)
T ss_dssp GGS-------SCCSCHHHHHHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETT-----
T ss_pred cee-------eeccccccccCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcC-----
Confidence 000 000000 0001123457889999999999999998 89999999999988765566788876
Q ss_pred CCCccccccCceEEEcCEEEEecCCCC
Q 006778 259 DGSKKENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 259 ~G~~~~~f~~g~~i~a~~vV~A~G~~s 285 (631)
|.+++||.||+|+|.++
T Consensus 131 ----------G~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 131 ----------GEVYRAKYVVNAVGLLS 147 (540)
T ss_dssp ----------SCEEEEEEEEECCCSCC
T ss_pred ----------CCEEEeCEEEECCcccc
Confidence 67899999999999765
No 71
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.22 E-value=1.1e-09 Score=122.55 Aligned_cols=76 Identities=18% Similarity=0.215 Sum_probs=57.3
Q ss_pred EEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCch
Q 006778 208 VISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 287 (631)
Q Consensus 208 ~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~ 287 (631)
.++...+...|.+.+++.|++|+.+++|+++..++ +.|++|.+.|. .+|+ +.+++||.||+|+|.++
T Consensus 184 ~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~-~~v~gV~~~d~---~tg~-------~~~i~A~~VV~AaG~ws-- 250 (571)
T 2rgh_A 184 RNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEG-DQIVGVKARDL---LTDE-------VIEIKAKLVINTSGPWV-- 250 (571)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET-TEEEEEEEEET---TTCC-------EEEEEBSCEEECCGGGH--
T ss_pred eEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeC-CEEEEEEEEEc---CCCC-------EEEEEcCEEEECCChhH--
Confidence 35677888899999999999999999999998876 57778876531 1222 35799999999999885
Q ss_pred hHHHHHHcCC
Q 006778 288 SEKLIKNFKL 297 (631)
Q Consensus 288 ~~~l~~~~g~ 297 (631)
..+.+..+.
T Consensus 251 -~~l~~~~g~ 259 (571)
T 2rgh_A 251 -DKVRNLNFT 259 (571)
T ss_dssp -HHHHTTCCS
T ss_pred -HHHHHhhcc
Confidence 344444443
No 72
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.22 E-value=4.2e-11 Score=125.95 Aligned_cols=121 Identities=22% Similarity=0.311 Sum_probs=89.4
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCc
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (631)
++.+||+|||||++|+++|+.|++. |++|+|||+.+.+|+.+.. .++. .
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~~gg~~~~-----------~~~~--------------~ 60 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMN------NISCRIIESMPQLGGQLAA-----------LYPE--------------K 60 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHHH-----------TCTT--------------S
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC------CCCEEEEecCCCCCCcccc-----------cCCC--------------c
Confidence 3468999999999999999999998 9999999999877753210 0000 0
Q ss_pred ceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccc
Q 006778 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (631)
Q Consensus 185 ~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~ 264 (631)
.+ . ..+. ...+.+..+.+.|.+.+++.|++++++++|+++..++++.+ .|.+.+
T Consensus 61 ~~--~------~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~-~v~~~~----------- 114 (360)
T 3ab1_A 61 HI--Y------DVAG------FPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTF-ETRTNT----------- 114 (360)
T ss_dssp EE--C------CSTT------CSSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCE-EEEETT-----------
T ss_pred cc--c------cCCC------CCCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceE-EEEECC-----------
Confidence 00 0 0010 00156788899999999989999999999999988764433 577665
Q ss_pred cccCceEEEcCEEEEecCCCCc
Q 006778 265 NFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 265 ~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.||+|+|.++.
T Consensus 115 ----g~~~~~~~li~AtG~~~~ 132 (360)
T 3ab1_A 115 ----GNVYRSRAVLIAAGLGAF 132 (360)
T ss_dssp ----SCEEEEEEEEECCTTCSC
T ss_pred ----CcEEEeeEEEEccCCCcC
Confidence 568999999999999764
No 73
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.22 E-value=6.8e-11 Score=138.25 Aligned_cols=73 Identities=22% Similarity=0.277 Sum_probs=60.4
Q ss_pred cEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCC
Q 006778 206 NYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 206 ~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s 285 (631)
...++...+.+.|.+.+++.|++|+.+++|++|..++ +.+++|.+.+ | +++||.||+|+|.++
T Consensus 145 ~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~-~~v~~V~t~~---------------G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 145 DGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSG-GRVTGVQTAD---------------G-VIPADIVVSCAGFWG 207 (830)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETT---------------E-EEECSEEEECCGGGH
T ss_pred CceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeC-CEEEEEEECC---------------c-EEECCEEEECCccch
Confidence 4567889999999999999999999999999998865 5676788775 4 799999999999986
Q ss_pred chhHHHHHHcCCC
Q 006778 286 SLSEKLIKNFKLR 298 (631)
Q Consensus 286 ~~~~~l~~~~g~~ 298 (631)
..+.+.+++.
T Consensus 208 ---~~l~~~~g~~ 217 (830)
T 1pj5_A 208 ---AKIGAMIGMA 217 (830)
T ss_dssp ---HHHHHTTTCC
T ss_pred ---HHHHHHhCCC
Confidence 4455556654
No 74
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.20 E-value=1.4e-10 Score=109.42 Aligned_cols=113 Identities=27% Similarity=0.380 Sum_probs=83.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
+||+|||||++|+.+|..|++. |.+|+|+|+.+..-... .
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~------g~~v~lie~~~~~~~~~---~------------------------------- 41 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA------GLKVLVLDGGRSKVKGV---S------------------------------- 41 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSCCTTTTC---S-------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCcEEEEeCCCCcccCc---h-------------------------------
Confidence 7999999999999999999999 99999999986321100 0
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccccc
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~ 267 (631)
.+.... .+|. .+....+.+.+.+.+++.|++++++ +|+++..++++ + .|.+.+
T Consensus 42 ~~~~~~--~~~~--------~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~-~-~v~~~~-------------- 94 (180)
T 2ywl_A 42 RVPNYP--GLLD--------EPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGV-F-EVETEE-------------- 94 (180)
T ss_dssp CCCCST--TCTT--------CCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSS-E-EEECSS--------------
T ss_pred hhhccC--CCcC--------CCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE-E-EEEECC--------------
Confidence 000000 0010 1345788899999999999999999 99999876644 3 577665
Q ss_pred CceEEEcCEEEEecCCCCchhH
Q 006778 268 RGVELRGRITLLAEGCRGSLSE 289 (631)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s~~~~ 289 (631)
| ++.+|.||+|+|.++.+.+
T Consensus 95 -g-~i~ad~vI~A~G~~~~~~~ 114 (180)
T 2ywl_A 95 -G-VEKAERLLLCTHKDPTLPS 114 (180)
T ss_dssp -C-EEEEEEEEECCTTCCHHHH
T ss_pred -C-EEEECEEEECCCCCCCccc
Confidence 6 8999999999999985544
No 75
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.20 E-value=1.5e-09 Score=116.88 Aligned_cols=40 Identities=35% Similarity=0.590 Sum_probs=37.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccc
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~ 153 (631)
+||||||||++||++|+.|++. |++|+|||+++.+|+.+.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~------G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA------GKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT------TCCEEEECSSSSSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHc------CCeEEEEecCCCccCeec
Confidence 7999999999999999999999 999999999888888664
No 76
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.20 E-value=6.1e-11 Score=121.78 Aligned_cols=115 Identities=18% Similarity=0.186 Sum_probs=76.5
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCc
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (631)
+.+|||+|||||||||+||+.|+|. |++|+|||+.. .|+... . ..+
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~------g~~v~lie~~~-~gg~~~------------------~-~~~-------- 49 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRA------RKQIALFDNNT-NRNRVT------------------Q-NSH-------- 49 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSC-CGGGGS------------------S-CBC--------
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCC-CCCeee------------------e-ecC--------
Confidence 3469999999999999999999999 99999999874 333110 0 000
Q ss_pred ceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccc
Q 006778 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (631)
Q Consensus 185 ~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~ 264 (631)
. ++.. -.+...++.+.+.+++.+.+...+....+..+...+++.. .|.+.+
T Consensus 50 ---------~--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~----------- 100 (304)
T 4fk1_A 50 ---------G--FITR------DGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLF-EIVTKD----------- 100 (304)
T ss_dssp ---------C--STTC------TTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCE-EEEETT-----------
T ss_pred ---------C--ccCC------CCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcE-EEEECC-----------
Confidence 0 0000 0033456666677777776644444556666666554543 466665
Q ss_pred cccCceEEEcCEEEEecCCCCc
Q 006778 265 NFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 265 ~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++++|.||+|||+++.
T Consensus 101 ----g~~~~a~~liiATGs~p~ 118 (304)
T 4fk1_A 101 ----HTKYLAERVLLATGMQEE 118 (304)
T ss_dssp ----CCEEEEEEEEECCCCEEE
T ss_pred ----CCEEEeCEEEEccCCccc
Confidence 688999999999998653
No 77
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.19 E-value=1.2e-10 Score=131.69 Aligned_cols=172 Identities=12% Similarity=0.128 Sum_probs=98.1
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCcccccc--cc----ChHhHHHHh-----------
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGN--VF----EPRALNELL----------- 167 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~--~i----~~~~l~~l~----------- 167 (631)
..++||||||||+|||+||+.|++...+.+||++|+||||....++++.+.+ .+ ........+
T Consensus 20 ~~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s~AqG~~gi~a~l~~ds~e~~~~~~~~~~~gl~ 99 (662)
T 3gyx_A 20 EHSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGAVAQGLSAINTYLGDNNADDYVRMVRTDLMGLV 99 (662)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCSTTTTCEEEECCCCTTSCHHHHHHHHHHHTTTCC
T ss_pred eEEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCcccccCcchheeecCCCCHHHHHHHHHHhcCCCc
Confidence 3469999999999999999999984110113899999999876554443222 11 110100100
Q ss_pred ----------------hhhhhcCCCeeeeccCcceEeecc-CCc---ccCCC-CCCCCC--cEEEeHHHHHHHHHHHHHh
Q 006778 168 ----------------PQWKQEEAPIRVPVSSDKFWFLTK-DRA---FSLPS-PFSNRG--NYVISLSQLVRWLGGKAEE 224 (631)
Q Consensus 168 ----------------~~~~~~~~~~~~~~~~~~~~~l~~-~~~---~~~p~-~~~~~~--~~~v~~~~l~~~L~~~a~~ 224 (631)
..+...+.++.... .+...+... ... +.... .....+ ...+....+.+.|.+++++
T Consensus 100 d~~~v~~l~~~a~~~i~~L~~~Gv~f~~~~-~~G~~~~g~~~~~fg~~~~~gg~~~~r~~~~~~~~G~~i~~~L~~~a~~ 178 (662)
T 3gyx_A 100 REDLIYDLGRHVDDSVHLFEEWGLPVWIKD-EHGHNLDGAQAKAAGKSLRNGDKPVRSGRWQIMINGESYKVIVAEAAKN 178 (662)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCCBCEEC-SSSCEECHHHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCceecC-CCCccccchhhhccccccccCccccccceecccCCHHHHHHHHHHHHHh
Confidence 01111111211100 000000000 000 00000 000011 1234556788889999988
Q ss_pred c--CcEEecCceEEEEEEcCC--CcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCch
Q 006778 225 L--GVEIYPGFAASEILYDAD--NKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSL 287 (631)
Q Consensus 225 ~--Gv~i~~g~~v~~i~~~~~--g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~ 287 (631)
. ||+|+.++.|++++.+++ |+|.||...+ .++|+ ...+.|+.||+|||+.+.+
T Consensus 179 ~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~---~~~g~-------~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 179 ALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFN---LRANE-------VHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp HHCTTTEECSEEECCCEECSSSTTBEEEEEEEE---SSSSC-------EEEEECSEEEECCCCBCSS
T ss_pred cCCCcEEEEceEEEEEEEeCCccceEEEEEEEE---cCCCc-------EEEEEeCEEEECCCccccc
Confidence 7 999999999999998875 4898987643 12343 2579999999999999853
No 78
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.19 E-value=5.5e-11 Score=132.07 Aligned_cols=136 Identities=19% Similarity=0.274 Sum_probs=94.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCee-eeccCc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIR-VPVSSD 184 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~-~~~~~~ 184 (631)
+.+||||||||++|+++|+.|++. |++|+|||+++.+|+.+.. ...|-. ......
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~------g~~v~iiE~~~~~GGtw~~------------------~~yPg~~~d~~~~ 63 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQA------GMKVLGIEAGEDVGGTWYW------------------NRYPGCRLDTESY 63 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTHHHH------------------CCCTTCBCSSCHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhC------CCCEEEEeCCCCCCCcccc------------------CCCCceeecCchh
Confidence 468999999999999999999998 9999999999988875321 111100 000000
Q ss_pred ceEee-ccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCc--EEecCceEEEEEEcCCCcEEEEEeCCCccccCCC
Q 006778 185 KFWFL-TKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGV--EIYPGFAASEILYDADNKVIGIGTNDMGIAKDGS 261 (631)
Q Consensus 185 ~~~~l-~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv--~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~ 261 (631)
.+.+. ..+. . ..........++.++.++|.+.+++.|+ .++++++|+++..++++..+.|.+.+
T Consensus 64 ~y~~~f~~~~-~----~~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~-------- 130 (545)
T 3uox_A 64 AYGYFALKGI-I----PEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDN-------- 130 (545)
T ss_dssp HHCHHHHTTS-S----TTCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETT--------
T ss_pred hcccccCccc-c----cCCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECC--------
Confidence 00000 0000 0 0001112235778899999999999887 79999999999987765566788876
Q ss_pred ccccccCceEEEcCEEEEecCCCC
Q 006778 262 KKENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 262 ~~~~f~~g~~i~a~~vV~A~G~~s 285 (631)
|.+++||.||+|+|..+
T Consensus 131 -------G~~~~ad~lV~AtG~~s 147 (545)
T 3uox_A 131 -------EEVVTCRFLISATGPLS 147 (545)
T ss_dssp -------TEEEEEEEEEECCCSCB
T ss_pred -------CCEEEeCEEEECcCCCC
Confidence 78899999999999765
No 79
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.18 E-value=1.1e-10 Score=129.77 Aligned_cols=137 Identities=24% Similarity=0.294 Sum_probs=93.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCe-eeeccCc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPI-RVPVSSD 184 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~-~~~~~~~ 184 (631)
+.+||||||||++|+++|+.|++. |++|+|||+++.+|+.+. ....|- ...+...
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~------G~~v~iiE~~~~~GGtw~------------------~~~ypg~~~dv~s~ 75 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQ------GLTVRAFEAASGVGGVWY------------------WNRYPGARCDVESI 75 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTHHH------------------HCCCTTCBCSSCTT
T ss_pred CCCCEEEECchHHHHHHHHHHHhC------CCCEEEEeCCCCCCCccc------------------cCCCCCceeCCCch
Confidence 468999999999999999999998 999999999998887432 110000 0000000
Q ss_pred ceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCc--EEecCceEEEEEEcCCCcEEEEEeCCCccccCCCc
Q 006778 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGV--EIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSK 262 (631)
Q Consensus 185 ~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv--~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~ 262 (631)
.+.+........ .........++.++.++|.+.+++.|+ .++++++|+++..++++..+.|.+.+
T Consensus 76 ~y~~~f~~~~~~----~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~--------- 142 (549)
T 4ap3_A 76 DYSYSFSPELEQ----EWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDR--------- 142 (549)
T ss_dssp TSSCCSCHHHHH----HCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETT---------
T ss_pred hccccccccccc----CCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECC---------
Confidence 000000000000 000112235778999999999999987 79999999999988766566788876
Q ss_pred cccccCceEEEcCEEEEecCCCC
Q 006778 263 KENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 263 ~~~f~~g~~i~a~~vV~A~G~~s 285 (631)
|.+++||.||+|+|..+
T Consensus 143 ------G~~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 143 ------GDEVSARFLVVAAGPLS 159 (549)
T ss_dssp ------CCEEEEEEEEECCCSEE
T ss_pred ------CCEEEeCEEEECcCCCC
Confidence 67899999999999654
No 80
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.18 E-value=1.5e-10 Score=128.83 Aligned_cols=138 Identities=23% Similarity=0.327 Sum_probs=92.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
.++||+|||||++|+++|+.|++. |++|+|||+++.+|+.+... .. |.... ........
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~------G~~v~iiE~~~~~GG~w~~~-~~---------pg~~~-----d~~~~~~~ 73 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLREL------GRSVHVIETAGDVGGVWYWN-RY---------PGARC-----DIESIEYC 73 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTHHHHC-CC---------TTCBC-----SSCTTTSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhC------CCCEEEEeCCCCCCCccccc-CC---------Cceee-----cccccccc
Confidence 468999999999999999999999 99999999999888753211 00 00000 00000000
Q ss_pred eEeeccC-CcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcC--cEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCc
Q 006778 186 FWFLTKD-RAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELG--VEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSK 262 (631)
Q Consensus 186 ~~~l~~~-~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~G--v~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~ 262 (631)
+.+.... ..+.+ ......+.++.++|...+++.+ ++|+++++|+++..++++..+.|.+.+
T Consensus 74 ~~f~~~~~~~~~~-------~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~--------- 137 (542)
T 1w4x_A 74 YSFSEEVLQEWNW-------TERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNH--------- 137 (542)
T ss_dssp CCSCHHHHHHCCC-------CBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETT---------
T ss_pred cccChhhhhccCc-------ccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECC---------
Confidence 0000000 00001 1123567888899988888766 679999999999987754455687766
Q ss_pred cccccCceEEEcCEEEEecCCCCc
Q 006778 263 KENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 263 ~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.+++||.||+|+|.++.
T Consensus 138 ------G~~~~ad~vV~AtG~~s~ 155 (542)
T 1w4x_A 138 ------GDRIRARYLIMASGQLSV 155 (542)
T ss_dssp ------CCEEEEEEEEECCCSCCC
T ss_pred ------CCEEEeCEEEECcCCCCC
Confidence 668999999999998763
No 81
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.18 E-value=1.5e-10 Score=126.45 Aligned_cols=55 Identities=15% Similarity=0.124 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCC
Q 006778 213 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (631)
Q Consensus 213 ~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~ 284 (631)
.+.+.|.+.+++.|++|+++++|++|..++++ ++.|.+. +.++.||.||+|++.+
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~-~~~v~~~----------------~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEG-RWKVSLR----------------DSSLEADHVISAIPAS 289 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGG-CEEEECS----------------SCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCc-eEEEEEC----------------CeEEEcCEEEECCCHH
Confidence 57788888888889999999999999887644 3356654 3579999999999864
No 82
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.18 E-value=8.8e-11 Score=121.95 Aligned_cols=119 Identities=24% Similarity=0.316 Sum_probs=87.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
+.+||+|||||++|+++|+.|++. |++|+|||+.+.+|+.+.. .++. ..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~~gg~~~~-----------~~~~--------------~~ 52 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMR------GLSFRFVDPLPEPGGQLTA-----------LYPE--------------KY 52 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSCHHHHH-----------TCTT--------------SE
T ss_pred CcCcEEEECCCHHHHHHHHHHHhC------CCCEEEEeCCCCCCCeeec-----------cCCC--------------ce
Confidence 468999999999999999999998 9999999999877753210 0000 00
Q ss_pred eEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccc
Q 006778 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (631)
Q Consensus 186 ~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (631)
++ ..+. ...+.+..+.+.|.+.+++.+++++++++|+++..+++ .+.|.+.+
T Consensus 53 ~~--------~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~--~~~v~~~~------------ 104 (335)
T 2zbw_A 53 IY--------DVAG------FPKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGD--LFKVTTSQ------------ 104 (335)
T ss_dssp EC--------CSTT------CSSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETT--EEEEEETT------------
T ss_pred ee--------ccCC------CCCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCC--EEEEEECC------------
Confidence 00 0010 00145678888999999989999999999999987753 33566655
Q ss_pred ccCceEEEcCEEEEecCCCCc
Q 006778 266 FQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.||+|+|.++.
T Consensus 105 ---g~~~~~~~lv~AtG~~~~ 122 (335)
T 2zbw_A 105 ---GNAYTAKAVIIAAGVGAF 122 (335)
T ss_dssp ---SCEEEEEEEEECCTTSEE
T ss_pred ---CCEEEeCEEEECCCCCCC
Confidence 568999999999998653
No 83
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.16 E-value=9e-11 Score=121.40 Aligned_cols=118 Identities=21% Similarity=0.309 Sum_probs=88.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
+.+||+|||||+|||++|+.|++. |++|+|||+.+.+|+... ..++...
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~~gG~~~-----------~~~~~~~-------------- 54 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMR------QASVKIIESLPQLGGQLS-----------ALYPEKY-------------- 54 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCHHHH-----------HHCTTSE--------------
T ss_pred ccceEEEECCCHHHHHHHHHHHHC------CCCEEEEEcCCCCCceeh-----------hcCCCce--------------
Confidence 358999999999999999999998 999999999998876321 0111000
Q ss_pred eEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccc
Q 006778 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (631)
Q Consensus 186 ~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (631)
+ ..++.. -.+...++...|.+.+++.|++++++++|+++..++++. +.|.+.+
T Consensus 55 ~--------~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-~~v~~~~------------ 107 (332)
T 3lzw_A 55 I--------YDVAGF------PKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGV-FKLVTNE------------ 107 (332)
T ss_dssp E--------CCSTTC------SSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSC-EEEEESS------------
T ss_pred E--------eccCCC------CCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCc-EEEEECC------------
Confidence 0 001100 014678899999999999999999999999998876533 3577765
Q ss_pred ccCceEEEcCEEEEecCCCC
Q 006778 266 FQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s 285 (631)
| ++.+|.||+|+|.++
T Consensus 108 ---g-~~~~d~vVlAtG~~~ 123 (332)
T 3lzw_A 108 ---E-THYSKTVIITAGNGA 123 (332)
T ss_dssp ---E-EEEEEEEEECCTTSC
T ss_pred ---C-EEEeCEEEECCCCCc
Confidence 4 499999999999843
No 84
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.16 E-value=4.8e-11 Score=122.73 Aligned_cols=118 Identities=22% Similarity=0.314 Sum_probs=80.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.|||+|||||||||+||+.|+++ |++|+|+|+.. .|+.+.+ +++.+..+
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~------g~~v~liE~~~-~gg~~~~-G~~~~~~~----------------------- 52 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRS------SLKPVMYEGFM-AGGVAAG-GQLTTTTI----------------------- 52 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT------TCCCEEECCSS-GGGCCTT-CGGGGSSE-----------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHC------CCCEEEEecCC-CCCcccC-CCcCChHH-----------------------
Confidence 59999999999999999999999 99999999975 3443332 33322110
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
+. ++|.. ...++..++.+.+.+.+++.++++.... +..+..+.+. . .+.+.+
T Consensus 53 --i~-----~~~g~-----~~~i~~~~l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~-~-~~~~~~------------- 104 (314)
T 4a5l_A 53 --IE-----NFPGF-----PNGIDGNELMMNMRTQSEKYGTTIITET-IDHVDFSTQP-F-KLFTEE------------- 104 (314)
T ss_dssp --EC-----CSTTC-----TTCEEHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSS-E-EEEETT-------------
T ss_pred --hh-----hccCC-----cccCCHHHHHHHHHHHHhhcCcEEEEeE-EEEeecCCCc-e-EEEECC-------------
Confidence 00 01100 0115567888888899999999987554 5555444433 2 344544
Q ss_pred cCceEEEcCEEEEecCCCC
Q 006778 267 QRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s 285 (631)
+.++.+|.||+|||+++
T Consensus 105 --~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 105 --GKEVLTKSVIIATGATA 121 (314)
T ss_dssp --CCEEEEEEEEECCCEEE
T ss_pred --CeEEEEeEEEEcccccc
Confidence 57899999999999765
No 85
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.16 E-value=5.1e-11 Score=134.82 Aligned_cols=88 Identities=19% Similarity=0.198 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCchhHHH
Q 006778 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKL 291 (631)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l 291 (631)
..+...|.+.+.+.||+|+.++.|++++.++ ++|.+|.+.+ ..+|+. ..+.||.||+|+|.++.+
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~-g~v~Gv~~~~---~~~G~~-------~~i~A~~VVlATGG~~~~---- 222 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQD-GKCYGAVVRD---LVTGDI-------IAYVAKGTLIATGGYGRI---- 222 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEEE---TTTCCE-------EEEECSEEEECCCCCGGG----
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecC-CEEEEEEEEE---CCCCcE-------EEEEcCEEEEccCcchhh----
Confidence 4788899999999999999999999998864 7788887642 022332 469999999999999864
Q ss_pred HHHcCCCcccccCCcceeeEEEEEEeecC
Q 006778 292 IKNFKLREKSHAQHQTYALGIKEVWEIDE 320 (631)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~g~~~~~~~~~ 320 (631)
|... ...+...|.|+.+.+....
T Consensus 223 ---y~~t---t~~~~~tGdG~~mA~~aGa 245 (660)
T 2bs2_A 223 ---YKNT---TNAVVCEGTGTAIALETGI 245 (660)
T ss_dssp ---SSSB---SSCTTCSCHHHHHHHTTSS
T ss_pred ---cCCC---CCCCCcccHHHHHHHHcCC
Confidence 2222 2334455666655544444
No 86
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.15 E-value=2.1e-10 Score=124.99 Aligned_cols=156 Identities=15% Similarity=0.181 Sum_probs=91.5
Q ss_pred cccEEEECCCHHHHHHHHHHHh---hcccCCCCCe---EEEEeeCCCCCCcccccccc--ChHhHHHHhhhhhhcCCCee
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQ---LCREKNVDLS---VCVVEKGAEVGAHIISGNVF--EPRALNELLPQWKQEEAPIR 178 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~---~~~~~~~G~~---V~vlEk~~~~g~~~~~g~~i--~~~~l~~l~~~~~~~~~~~~ 178 (631)
.+||+|||||++||++|..|++ . |++ |+|||+.+.+|+.+...... .+..+ +........+.
T Consensus 2 ~~~V~IIGaG~aGl~aA~~L~~~~~~------G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~----~~~~~~y~~l~ 71 (464)
T 2xve_A 2 ATRIAILGAGPSGMAQLRAFQSAQEK------GAEIPELVCFEKQADWGGQWNYTWRTGLDENGE----PVHSSMYRYLW 71 (464)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHHHT------TCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSS----BCCCCCCTTCB
T ss_pred CCcEEEECccHHHHHHHHHHHhhhhc------CCCCCcEEEEEcCCCCCCEeecCCCCCccccCC----CCcCccccchh
Confidence 4699999999999999999999 8 999 99999998888755321100 00000 00000000000
Q ss_pred eeccCcceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcE--EecCceEEEEEEcCCCcEEEEEeCCCcc
Q 006778 179 VPVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVE--IYPGFAASEILYDADNKVIGIGTNDMGI 256 (631)
Q Consensus 179 ~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~--i~~g~~v~~i~~~~~g~v~gV~~~d~g~ 256 (631)
.......+.+. .+.++..........+++..+.++|.+.+++.|++ |+++++|+++..++++..+.|++.+.
T Consensus 72 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~-- 145 (464)
T 2xve_A 72 SNGPKECLEFA----DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDH-- 145 (464)
T ss_dssp CSSCGGGTCBT----TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEET--
T ss_pred hcCChhhcccC----CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEc--
Confidence 00000000000 00000000000122357889999999999999988 99999999998876433345665431
Q ss_pred ccCCCccccccCceEEEcCEEEEecCCCCc
Q 006778 257 AKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 257 ~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
.+|+ ..++.+|.||+|+|.++.
T Consensus 146 -~~g~-------~~~~~~d~VVvAtG~~s~ 167 (464)
T 2xve_A 146 -TTDT-------IYSEEFDYVVCCTGHFST 167 (464)
T ss_dssp -TTTE-------EEEEEESEEEECCCSSSS
T ss_pred -CCCc-------eEEEEcCEEEECCCCCCC
Confidence 1121 157899999999996553
No 87
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.15 E-value=1.2e-09 Score=119.48 Aligned_cols=42 Identities=26% Similarity=0.461 Sum_probs=37.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~ 153 (631)
..+||+|||||++||++|+.|++. |++|+|+|+++.+|+.+.
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~------g~~v~v~E~~~~~GGr~~ 56 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSR------GTDAVLLESSARLGGAVG 56 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTT------TCCEEEECSSSSSBTTCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC------CCCEEEEEcCCCCCceee
Confidence 358999999999999999999999 999999999999988653
No 88
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.15 E-value=2.6e-10 Score=117.34 Aligned_cols=114 Identities=20% Similarity=0.289 Sum_probs=84.6
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCc
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (631)
.+.+||+|||||++||++|+.|++. |++|+|||+. +|+.......
T Consensus 13 ~~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~--~gg~~~~~~~--------------------------- 57 (323)
T 3f8d_A 13 GEKFDVIIVGLGPAAYGAALYSARY------MLKTLVIGET--PGGQLTEAGI--------------------------- 57 (323)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESS--TTGGGGGCCE---------------------------
T ss_pred CCccCEEEECccHHHHHHHHHHHHC------CCcEEEEecc--CCCeeccccc---------------------------
Confidence 3568999999999999999999999 9999999998 5653221000
Q ss_pred ceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccc
Q 006778 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (631)
Q Consensus 185 ~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~ 264 (631)
...+|... .+....+.+.|.+.+++.|++++. .+|+++..+++. + .|.+.+
T Consensus 58 ---------~~~~~~~~------~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~-~-~v~~~~----------- 108 (323)
T 3f8d_A 58 ---------VDDYLGLI------EIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDE-F-VVKTKR----------- 108 (323)
T ss_dssp ---------ECCSTTST------TEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--C-E-EEEESS-----------
T ss_pred ---------ccccCCCC------CCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCE-E-EEEECC-----------
Confidence 00011100 156778899999999999999998 899999877533 3 466665
Q ss_pred cccCceEEEcCEEEEecCCCCc
Q 006778 265 NFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 265 ~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.||+|+|.++.
T Consensus 109 ----g~~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 109 ----KGEFKADSVILGIGVKRR 126 (323)
T ss_dssp ----SCEEEEEEEEECCCCEEC
T ss_pred ----CCEEEcCEEEECcCCCCc
Confidence 578999999999998753
No 89
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.14 E-value=2.4e-10 Score=129.52 Aligned_cols=165 Identities=19% Similarity=0.245 Sum_probs=94.0
Q ss_pred CccccEEEECCCHHHHHHHHHHH---h-hcccCCCCCeEEEEeeCCCCCCccccccc------cC-------hHhHHHHh
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLK---Q-LCREKNVDLSVCVVEKGAEVGAHIISGNV------FE-------PRALNELL 167 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La---~-~~~~~~~G~~V~vlEk~~~~g~~~~~g~~------i~-------~~~l~~l~ 167 (631)
..++||||||||+|||+||+.|+ + . |++|+||||....+++..+++. +. .......+
T Consensus 20 ~~~~DVvVIG~G~AGl~AAl~aa~~~~~~------G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~ 93 (643)
T 1jnr_A 20 VVETDILIIGGGFSGCGAAYEAAYWAKLG------GLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYV 93 (643)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHTTT------TCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHH
T ss_pred eccCCEEEECcCHHHHHHHHHHhhhhhhC------CCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHH
Confidence 35799999999999999999999 5 7 9999999998754333222111 21 01111111
Q ss_pred hhhhhcCCCee----e----eccCcceEeeccCCcccCCCC----CCCCC--cEEEeHHHHHHHHHHHHHhc-Cc-EEec
Q 006778 168 PQWKQEEAPIR----V----PVSSDKFWFLTKDRAFSLPSP----FSNRG--NYVISLSQLVRWLGGKAEEL-GV-EIYP 231 (631)
Q Consensus 168 ~~~~~~~~~~~----~----~~~~~~~~~l~~~~~~~~p~~----~~~~~--~~~v~~~~l~~~L~~~a~~~-Gv-~i~~ 231 (631)
........... . ....+.+.++.. .++.+... ....+ ...+....+.+.|.+.+++. || +|+.
T Consensus 94 ~~~~~~g~~l~d~~~v~~~~~~~~~~i~~l~~-~Gv~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~ 172 (643)
T 1jnr_A 94 RYVTLDMMGLAREDLVADYARHVDGTVHLFEK-WGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYE 172 (643)
T ss_dssp HHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH-TTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEEC
T ss_pred HHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHH-cCCcceeCCCCCccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEe
Confidence 11111000000 0 000001111110 01111000 00001 11234456778888888887 99 9999
Q ss_pred CceEEEEEEcCC--CcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCc
Q 006778 232 GFAASEILYDAD--NKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 232 g~~v~~i~~~~~--g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
++.|++++.+++ ++|.||...+ ..+|+ ...+.||.||+|+|.++.
T Consensus 173 ~~~v~~L~~~~~~~g~v~Gv~~~~---~~~g~-------~~~i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 173 RVFIFELLKDNNDPNAVAGAVGFS---VREPK-------FYVFKAKAVILATGGATL 219 (643)
T ss_dssp SEEEEEEEECTTCTTBEEEEEEEE---SSSSC-------EEEEECSEEEECCCCBCS
T ss_pred cCEEEEEEEcCCccceeEEEEEEE---ecCCc-------EEEEEcCEEEECCCcccc
Confidence 999999998764 2888887532 02232 247999999999999986
No 90
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.13 E-value=4.7e-10 Score=125.99 Aligned_cols=67 Identities=19% Similarity=0.299 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHhcC-cEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCchh
Q 006778 211 LSQLVRWLGGKAEELG-VEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLS 288 (631)
Q Consensus 211 ~~~l~~~L~~~a~~~G-v~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~ 288 (631)
...+.+.|.+++++.| ++|++++.|++++.++ ++|.+|.+.+. .+|+. .++.||.||+|||.++.+.
T Consensus 133 g~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~-g~v~Gv~~~~~---~~G~~-------~~i~A~~VVlAtGg~s~~~ 200 (602)
T 1kf6_A 133 GFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDD-GHVRGLVAMNM---MEGTL-------VQIRANAVVMATGGAGRVY 200 (602)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEETEEEEEEEEET-TEEEEEEEEET---TTTEE-------EEEECSCEEECCCCCGGGS
T ss_pred HHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC-CEEEEEEEEEc---CCCcE-------EEEEcCeEEECCCCCcccc
Confidence 3578899999999888 9999999999998875 67777765320 12221 3799999999999999764
No 91
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.11 E-value=5.4e-10 Score=117.02 Aligned_cols=149 Identities=15% Similarity=0.182 Sum_probs=82.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCC-ccccccccCh-------HhH----HHHhhhhhhcCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGA-HIISGNVFEP-------RAL----NELLPQWKQEEA 175 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~-~~~~g~~i~~-------~~l----~~l~~~~~~~~~ 175 (631)
+||+|||||++||++|+.|++......|+.+|+|||+....++ ...+++.+.+ ..+ .+.+..|.....
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~aS~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPNNPQEADWSQQTFDYLLSHVH 80 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGSGGGTCCCBCCCCSSCCSCTHHHHHHHHHHHHHHTTTT
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCCccccCcceeecccCCCchHHHHHHHHHHHHHHHHHhh
Confidence 3899999999999999999998000001299999999864322 2234444432 011 112223322110
Q ss_pred -------Cee------eeccCc----------ceEeeccCCcccCCCC---CCCCCcEEEeHHHHHHHHHHHHHhcCcEE
Q 006778 176 -------PIR------VPVSSD----------KFWFLTKDRAFSLPSP---FSNRGNYVISLSQLVRWLGGKAEELGVEI 229 (631)
Q Consensus 176 -------~~~------~~~~~~----------~~~~l~~~~~~~~p~~---~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i 229 (631)
.+. ...... .+.+++...--..|.. ... ..+.++...+.+.|.+.+++.|++|
T Consensus 81 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~p~~~~~~~~-~~~~v~p~~~~~~l~~~~~~~Gv~i 159 (351)
T 3g3e_A 81 SPNAENLGLFLISGYNLFHEAIPDPSWKDTVLGFRKLTPRELDMFPDYGYGWFH-TSLILEGKNYLQWLTERLTERGVKF 159 (351)
T ss_dssp STTHHHHTEEEEEEEEEESSCCCCCGGGGTSEEEEECCHHHHTTCTTCCEEEEE-EEEEECHHHHHHHHHHHHHHTTCEE
T ss_pred ccCCCCccEEEEEEEEEecCCccccCHHHhCCCceECCHHHhccCCCCceEEEe-cceEEcHHHHHHHHHHHHHHCCCEE
Confidence 000 000000 0111110000001110 000 1356889999999999999999999
Q ss_pred ecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCc
Q 006778 230 YPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 230 ~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
+. ++|+++..+ ..++||.||+|+|.++.
T Consensus 160 ~~-~~V~~i~~~----------------------------~~~~a~~VV~A~G~~s~ 187 (351)
T 3g3e_A 160 FQ-RKVESFEEV----------------------------AREGADVIVNCTGVWAG 187 (351)
T ss_dssp EE-CCCCCHHHH----------------------------HHTTCSEEEECCGGGGG
T ss_pred EE-EEeCCHHHh----------------------------hcCCCCEEEECCCcChH
Confidence 87 777544211 12579999999999873
No 92
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.11 E-value=6.7e-09 Score=114.83 Aligned_cols=41 Identities=39% Similarity=0.553 Sum_probs=38.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~ 152 (631)
+.+||||||||++||+||..|++. |++|+|+|+++.+|+.+
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~------G~~V~vlE~~~~~GGr~ 43 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDS------GLNVVVLEARDRVGGRT 43 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHT------TCCEEEECSSSSSBTTC
T ss_pred CCceEEEECCCHHHHHHHHHHHHC------CCCEEEEeCCCCCCCce
Confidence 357999999999999999999999 99999999999998865
No 93
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.10 E-value=2.8e-10 Score=117.12 Aligned_cols=112 Identities=24% Similarity=0.346 Sum_probs=76.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
++|||+||||||||++||+.|+++ |++|+|+||. .+|+.+....++..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~------g~~V~liE~~-~~gG~~~~~~~i~~------------------------- 52 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRA------NLKTVMIERG-IPGGQMANTEEVEN------------------------- 52 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CTTGGGGGCSCBCC-------------------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCCEEEEecC-CCCCeeecccccCC-------------------------
Confidence 579999999999999999999999 9999999986 46665443332210
Q ss_pred eEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccc
Q 006778 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (631)
Q Consensus 186 ~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (631)
+|.. -.+...++.........+.+..+..+..+....... .. +...+
T Consensus 53 -----------~p~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~------------ 99 (312)
T 4gcm_A 53 -----------FPGF------EMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGE-YK---VINFG------------ 99 (312)
T ss_dssp -----------STTC------SSBCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSS-CE---EEECS------------
T ss_pred -----------cCCc------cccchHHHHHHHHHHHhhccccccceeeeeeeeeec-ce---eeccC------------
Confidence 0100 012345566666677777778877776665544332 21 22222
Q ss_pred ccCceEEEcCEEEEecCCCC
Q 006778 266 FQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s 285 (631)
+.++++|.+|+|||+++
T Consensus 100 ---~~~~~~d~liiAtGs~~ 116 (312)
T 4gcm_A 100 ---NKELTAKAVIIATGAEY 116 (312)
T ss_dssp ---SCEEEEEEEEECCCEEE
T ss_pred ---CeEEEeceeEEcccCcc
Confidence 57899999999999765
No 94
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.10 E-value=6.3e-10 Score=121.51 Aligned_cols=62 Identities=26% Similarity=0.224 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCchh
Q 006778 211 LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLS 288 (631)
Q Consensus 211 ~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~ 288 (631)
...+.+.|.+++++.|++|+.++.| ++..++ +++.+|.+.+ . +.++.||.||+|||.++.+.
T Consensus 118 g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~-~~v~Gv~v~~----~----------~g~~~a~~VVlAtGg~~~~~ 179 (472)
T 2e5v_A 118 GREIFNFLLKLAREEGIPIIEDRLV-EIRVKD-GKVTGFVTEK----R----------GLVEDVDKLVLATGGYSYLY 179 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEECCCEE-EEEEET-TEEEEEEETT----T----------EEECCCSEEEECCCCCGGGS
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEE-EEEEeC-CEEEEEEEEe----C----------CCeEEeeeEEECCCCCcccC
Confidence 4678888999998889999999999 998765 6777776643 0 23577999999999998653
No 95
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.10 E-value=2.4e-10 Score=126.83 Aligned_cols=90 Identities=13% Similarity=0.166 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHh-cCcEEecCceEEEEEEcCCC------cEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCC
Q 006778 212 SQLVRWLGGKAEE-LGVEIYPGFAASEILYDADN------KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (631)
Q Consensus 212 ~~l~~~L~~~a~~-~Gv~i~~g~~v~~i~~~~~g------~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~ 284 (631)
..+.+.|.+++++ .||+|++++.|++++.++++ +|.+|.+.+ .++|+. .++.||.||+|+|.+
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~---~~~G~~-------~~i~A~~VVlAtGg~ 207 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWN---RNKETV-------ETCHAKAVVLATGGA 207 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEE---TTTTEE-------EEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEE---cCCCcE-------EEEEcCeEEECCCCc
Confidence 4677778888888 69999999999999984435 788887753 012321 479999999999999
Q ss_pred CchhHHHHHHcCCCcccccCCcceeeEEEEEEeecCC
Q 006778 285 GSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEG 321 (631)
Q Consensus 285 s~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~ 321 (631)
+.+- ... ...+...|.|+.+.+.+...
T Consensus 208 ~~~~-------~~~---~~~~~~tGdG~~ma~~aGa~ 234 (540)
T 1chu_A 208 SKVY-------QYT---TNPDISSGDGIAMAWRAGCR 234 (540)
T ss_dssp GGGS-------SSB---SCGGGCSCHHHHHHHHTTCC
T ss_pred cccc-------CCC---cCCCCCchHHHHHHHHcCCC
Confidence 8642 111 22334556666555554443
No 96
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.10 E-value=4.8e-10 Score=121.61 Aligned_cols=162 Identities=16% Similarity=0.089 Sum_probs=91.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCC--eEEEEeeCCCCCCccccccccChH-hHHHHhhhhhhcCCCeee---
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGAEVGAHIISGNVFEPR-ALNELLPQWKQEEAPIRV--- 179 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~--~V~vlEk~~~~g~~~~~g~~i~~~-~l~~l~~~~~~~~~~~~~--- 179 (631)
+.+||+||||||+||++|..|++. |. +|+|||+.+.+|+.+......... .+....+... ..++..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~------G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~--~~~~~~g~~ 76 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE------KAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILT--TEPIVGPAA 76 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT------TCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCC--CCCBCCSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc------CCCCCeEEEecCCCCCCeecCCCCCCccccccccccccc--ccccccccc
Confidence 468999999999999999999999 99 999999998887654332211000 0000000000 000000
Q ss_pred --eccCcceEeeccCC---cccCC-CCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCC
Q 006778 180 --PVSSDKFWFLTKDR---AFSLP-SPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTND 253 (631)
Q Consensus 180 --~~~~~~~~~l~~~~---~~~~p-~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d 253 (631)
......+..+..+. ...++ .++.......+++..+.++|.+.+++.++.|+++++|+++..+++ . +.|++.+
T Consensus 77 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~-~-~~V~~~~ 154 (447)
T 2gv8_A 77 LPVYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDG-S-WVVTYKG 154 (447)
T ss_dssp CCBCCCCCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETT-E-EEEEEEE
T ss_pred cCCccCchhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCC-e-EEEEEee
Confidence 00000000000000 00010 001111123367889999999999888888999999999987653 2 3455543
Q ss_pred CccccCCCccccccCceEEEcCEEEEecCCCCc
Q 006778 254 MGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 254 ~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
. .+|+. ..++.+|.||+|+|.++.
T Consensus 155 ~---~~G~~------~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 155 T---KAGSP------ISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp S---STTCC------EEEEEESEEEECCCSSSS
T ss_pred c---CCCCe------eEEEEeCEEEECCCCCCC
Confidence 1 11210 027999999999999653
No 97
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.08 E-value=1.9e-10 Score=121.03 Aligned_cols=138 Identities=23% Similarity=0.313 Sum_probs=85.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
.+||+|||||++|+++|+.|++. |+ +|+|||+.+ +|+.+.... ... ....+. .....
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~------g~~~v~lie~~~-~Gg~~~~~~----~~~--------~~~~~~---~~~~~ 61 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDF------GITDVIILEKGT-VGHSFKHWP----KST--------RTITPS---FTSNG 61 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCCEEEECSSS-TTHHHHTSC----TTC--------BCSSCC---CCCGG
T ss_pred cCcEEEECcCHHHHHHHHHHHHc------CCCcEEEEecCC-CCCccccCc----ccc--------cccCcc---hhccc
Confidence 58999999999999999999998 99 999999987 765322100 000 000000 00000
Q ss_pred eEeecc-CCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccc
Q 006778 186 FWFLTK-DRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (631)
Q Consensus 186 ~~~l~~-~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~ 264 (631)
+.+... .........+. .....+.+..+.++|.+.+++.|++++++++|+++..++++ + .|.+.+
T Consensus 62 ~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~----------- 127 (369)
T 3d1c_A 62 FGMPDMNAISMDTSPAFT-FNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAY-Y-TIATTT----------- 127 (369)
T ss_dssp GTCCCTTCSSTTCCHHHH-HCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-E-EEEESS-----------
T ss_pred CCchhhhhcccccccccc-ccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe-E-EEEeCC-----------
Confidence 000000 00000000000 00112466788888888889999999999999999877543 2 466654
Q ss_pred cccCceEEEcCEEEEecCCCC
Q 006778 265 NFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 265 ~f~~g~~i~a~~vV~A~G~~s 285 (631)
| ++.+|.||+|+|.++
T Consensus 128 ----g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 128 ----E-TYHADYIFVATGDYN 143 (369)
T ss_dssp ----C-CEEEEEEEECCCSTT
T ss_pred ----C-EEEeCEEEECCCCCC
Confidence 3 589999999999875
No 98
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.08 E-value=3.3e-10 Score=115.12 Aligned_cols=111 Identities=17% Similarity=0.233 Sum_probs=81.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.+||+|||||++||++|+.|++. |++|+|+|+....+... .+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~~~~~~~~----------------~~---------------- 43 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA------RKNILLVDAGERRNRFA----------------SH---------------- 43 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT------TCCEEEEECCCCGGGGC----------------SC----------------
T ss_pred CCCEEEECCCHHHHHHHHHHHhC------CCCEEEEeCCCcccccc----------------hh----------------
Confidence 58999999999999999999999 99999999975322100 00
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhc-CcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~-Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (631)
...++. ........+.+.+.+.+.+. +++++.+ +|+++..++++ +.|.+.+
T Consensus 44 -------~~~~~~------~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i~~~~~~--~~v~~~~------------ 95 (297)
T 3fbs_A 44 -------SHGFLG------QDGKAPGEIIAEARRQIERYPTIHWVEG-RVTDAKGSFGE--FIVEIDG------------ 95 (297)
T ss_dssp -------CCSSTT------CTTCCHHHHHHHHHHHHTTCTTEEEEES-CEEEEEEETTE--EEEEETT------------
T ss_pred -------hcCCcC------CCCCCHHHHHHHHHHHHHhcCCeEEEEe-EEEEEEEcCCe--EEEEECC------------
Confidence 000110 00144578888899998887 6888754 89999877643 3577765
Q ss_pred ccCceEEEcCEEEEecCCCCc
Q 006778 266 FQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.||+|+|.++.
T Consensus 96 ---g~~~~~d~vviAtG~~~~ 113 (297)
T 3fbs_A 96 ---GRRETAGRLILAMGVTDE 113 (297)
T ss_dssp ---SCEEEEEEEEECCCCEEE
T ss_pred ---CCEEEcCEEEECCCCCCC
Confidence 678999999999998764
No 99
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.07 E-value=5e-10 Score=115.84 Aligned_cols=116 Identities=29% Similarity=0.365 Sum_probs=83.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
..+||+||||||+|+++|+.|++. |++|+|||+. .+|+.+.....+.
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~------g~~v~lie~~-~~gg~~~~~~~~~-------------------------- 53 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRA------QLSTLILEKG-MPGGQIAWSEEVE-------------------------- 53 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CTTGGGGGCSCBC--------------------------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHc------CCcEEEEeCC-CCCcccccccccc--------------------------
Confidence 468999999999999999999999 9999999998 5665332110000
Q ss_pred eEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEc--CCCcEEEEEeCCCccccCCCcc
Q 006778 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYD--ADNKVIGIGTNDMGIAKDGSKK 263 (631)
Q Consensus 186 ~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~--~~g~v~gV~~~d~g~~~~G~~~ 263 (631)
.++.. ...+.+..+.+.|.+.+++.|++++. .+|+++..+ +++ .+.|.+.+
T Consensus 54 ----------~~~~~-----~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~-~~~v~~~~---------- 106 (325)
T 2q7v_A 54 ----------NFPGF-----PEPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHP-YPFTVRGY---------- 106 (325)
T ss_dssp ----------CSTTC-----SSCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSS-CCEEEEES----------
T ss_pred ----------cCCCC-----CCCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCc-eEEEEECC----------
Confidence 00000 00145678888999999999999987 588888876 432 12355544
Q ss_pred ccccCceEEEcCEEEEecCCCCc
Q 006778 264 ENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 264 ~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.||+|+|.++.
T Consensus 107 -----g~~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 107 -----NGEYRAKAVILATGADPR 124 (325)
T ss_dssp -----SCEEEEEEEEECCCEEEC
T ss_pred -----CCEEEeCEEEECcCCCcC
Confidence 568999999999998653
No 100
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.06 E-value=3.4e-09 Score=116.32 Aligned_cols=57 Identities=16% Similarity=0.188 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHhcC-cEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCC
Q 006778 212 SQLVRWLGGKAEELG-VEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 212 ~~l~~~L~~~a~~~G-v~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s 285 (631)
..+.+.|.+.+++.| ++|+++++|++|..++++ + .|.+.+ |.+++||.||+|.|...
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~-v-~v~~~~---------------g~~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDA-A-RVTARD---------------GREFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSS-E-EEEETT---------------CCEEEEEEEEECCCGGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE-E-EEEECC---------------CCEEEcCEEEECCCHHH
Confidence 467777888888888 999999999999887643 4 477665 56899999999999753
No 101
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.06 E-value=8.9e-10 Score=114.97 Aligned_cols=138 Identities=20% Similarity=0.237 Sum_probs=81.6
Q ss_pred ccEEEECCCHHHHHHHHHHHh---hcccCCCCCeEEEEeeCCCCCCcccccc-------cc---------ChH---hHHH
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQ---LCREKNVDLSVCVVEKGAEVGAHIISGN-------VF---------EPR---ALNE 165 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~---~~~~~~~G~~V~vlEk~~~~g~~~~~g~-------~i---------~~~---~l~~ 165 (631)
+||+|||||++||++|+.|++ . |++|+||||++.+|+...... .+ .+. .+.+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~------G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~ 75 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG------PLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQR 75 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C------CEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC------CceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHH
Confidence 589999999999999999999 7 999999999988776432110 00 011 2233
Q ss_pred HhhhhhhcCCCeeeeccCcceEeeccCCcccCCCCCCCCCcEEE--eHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCC
Q 006778 166 LLPQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVI--SLSQLVRWLGGKAEELGVEIYPGFAASEILYDAD 243 (631)
Q Consensus 166 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~v--~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~ 243 (631)
++..|...+.... ...... .... ......|.. ....+.+.|.+ +.|++|+++++|++|..+++
T Consensus 76 ~~~~~~~~g~~~~--~~~~~~-------~~~~---~~~~~~~~~~~g~~~l~~~l~~---~~g~~i~~~~~V~~i~~~~~ 140 (342)
T 3qj4_A 76 FYDELLAYGVLRP--LSSPIE-------GMVM---KEGDCNFVAPQGISSIIKHYLK---ESGAEVYFRHRVTQINLRDD 140 (342)
T ss_dssp HHHHHHHTTSCEE--CCSCEE-------TCCC-----CCEEEECTTCTTHHHHHHHH---HHTCEEESSCCEEEEEECSS
T ss_pred HHHHHHhCCCeec--Cchhhc-------ceec---cCCccceecCCCHHHHHHHHHH---hcCCEEEeCCEEEEEEEcCC
Confidence 3344433211100 000000 0000 000011211 11344444443 34899999999999998775
Q ss_pred CcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCC
Q 006778 244 NKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGC 283 (631)
Q Consensus 244 g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~ 283 (631)
+ + .|.+.+ |.++.||.||+|+..
T Consensus 141 ~-~-~v~~~~---------------g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 141 K-W-EVSKQT---------------GSPEQFDLIVLTMPV 163 (342)
T ss_dssp S-E-EEEESS---------------SCCEEESEEEECSCH
T ss_pred E-E-EEEECC---------------CCEEEcCEEEECCCH
Confidence 4 4 477665 556899999999974
No 102
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.04 E-value=4e-10 Score=116.78 Aligned_cols=120 Identities=19% Similarity=0.275 Sum_probs=84.4
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC----CCCCccccccccChHhHHHHhhhhhhcCCCeeee
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA----EVGAHIISGNVFEPRALNELLPQWKQEEAPIRVP 180 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~----~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~ 180 (631)
.+.+||+|||||++||++|+.|++. |++|+|||+.+ .+|+......
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~vie~~~~~~~~~gg~~~~~~------------------------ 69 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARA------EIKPILYEGMMANGIAAGGQLTTTT------------------------ 69 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT------TCCCEEECCSSBTTBCTTCGGGGSS------------------------
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEecCCCCCCCcCcccccch------------------------
Confidence 4579999999999999999999999 99999999954 3443211000
Q ss_pred ccCcceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCC
Q 006778 181 VSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDG 260 (631)
Q Consensus 181 ~~~~~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G 260 (631)
. . ..+|.. ...+.+..+...|.+.+++.|++++.++ |+++..+++ .+ .+.+.+ .
T Consensus 70 ----~--~------~~~~~~-----~~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~-~~-~v~~~~----~-- 123 (338)
T 3itj_A 70 ----E--I------ENFPGF-----PDGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSK-PF-KLWTEF----N-- 123 (338)
T ss_dssp ----E--E------CCSTTC-----TTCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSS-SE-EEEETT----C--
T ss_pred ----h--h------cccCCC-----cccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCC-EE-EEEEEe----c--
Confidence 0 0 001100 1125678899999999999999999998 988877653 33 355531 0
Q ss_pred CccccccCceEEEcCEEEEecCCCCc
Q 006778 261 SKKENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 261 ~~~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
.++.++.+|.||+|+|.++.
T Consensus 124 ------~~~~~~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 124 ------EDAEPVTTDAIILATGASAK 143 (338)
T ss_dssp ------SSSCCEEEEEEEECCCEEEC
T ss_pred ------CCCcEEEeCEEEECcCCCcC
Confidence 01567899999999998653
No 103
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.04 E-value=6.3e-10 Score=114.78 Aligned_cols=115 Identities=23% Similarity=0.289 Sum_probs=81.7
Q ss_pred cCccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccC
Q 006778 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSS 183 (631)
Q Consensus 104 ~~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~ 183 (631)
|.+++||+|||||++|+++|+.|++. |++|+|||+. .+|+.+.....+.
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~------g~~v~lie~~-~~gg~~~~~~~~~------------------------ 61 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARS------GFSVAILDKA-VAGGLTAEAPLVE------------------------ 61 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-STTGGGGGCSCBC------------------------
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhC------CCcEEEEeCC-CCCccccccchhh------------------------
Confidence 44579999999999999999999999 9999999994 4555322110000
Q ss_pred cceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcc
Q 006778 184 DKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (631)
Q Consensus 184 ~~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~ 263 (631)
.+|.. ..+....+.+.|.+.+++.|++++. .+|+++..+++ .+ .|.+.
T Consensus 62 ------------~~~~~------~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~-~~-~v~~~----------- 109 (319)
T 3cty_A 62 ------------NYLGF------KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQG-GF-DIETN----------- 109 (319)
T ss_dssp ------------CBTTB------SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETT-EE-EEEES-----------
T ss_pred ------------hcCCC------cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCC-EE-EEEEC-----------
Confidence 00100 0134567888888899999999988 68988887653 22 35553
Q ss_pred ccccCceEEEcCEEEEecCCCCc
Q 006778 264 ENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 264 ~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
+.++.+|.||+|+|.++.
T Consensus 110 -----~~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 110 -----DDTYHAKYVIITTGTTHK 127 (319)
T ss_dssp -----SSEEEEEEEEECCCEEEC
T ss_pred -----CCEEEeCEEEECCCCCcc
Confidence 357999999999998653
No 104
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.04 E-value=5.3e-10 Score=114.66 Aligned_cols=115 Identities=27% Similarity=0.340 Sum_probs=82.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
+|||+||||||+|+++|+.|++. |++|+|+|+. .|+.+.... .+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~------g~~v~li~~~--~gG~~~~~~----------------------------~~ 44 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARK------GIRTGLMGER--FGGQILDTV----------------------------DI 44 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTT------TCCEEEECSS--TTGGGGGCC----------------------------EE
T ss_pred CCCEEEECcCHHHHHHHHHHHHC------CCcEEEEeCC--CCceecccc----------------------------cc
Confidence 37999999999999999999999 9999999863 454321100 00
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCC-CcEEEEEeCCCccccCCCcccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDAD-NKVIGIGTNDMGIAKDGSKKEN 265 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~-g~v~gV~~~d~g~~~~G~~~~~ 265 (631)
. .++. .....+..+.+.|.+.+++.|++++.+++|+.+..+.+ +..+.|.+.+
T Consensus 45 ~--------~~~~------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~------------ 98 (310)
T 1fl2_A 45 E--------NYIS------VPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETAS------------ 98 (310)
T ss_dssp C--------CBTT------BSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETT------------
T ss_pred c--------cccC------cCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECC------------
Confidence 0 0000 00135678888899999889999999999999876532 2233577665
Q ss_pred ccCceEEEcCEEEEecCCCCc
Q 006778 266 FQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.||+|+|.++.
T Consensus 99 ---g~~~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 99 ---GAVLKARSIIVATGAKWR 116 (310)
T ss_dssp ---SCEEEEEEEEECCCEEEC
T ss_pred ---CCEEEeCEEEECcCCCcC
Confidence 568999999999998653
No 105
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.04 E-value=5.6e-10 Score=114.55 Aligned_cols=113 Identities=22% Similarity=0.312 Sum_probs=83.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
+||+|||||++|+++|+.|++. |+ +|+|||+. ..|+.+.....+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~------g~~~v~lie~~-~~gg~~~~~~~~---------------------------- 46 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG------GVKNAVLFEKG-MPGGQITGSSEI---------------------------- 46 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT------TCSSEEEECSS-STTCGGGGCSCB----------------------------
T ss_pred ceEEEECccHHHHHHHHHHHHC------CCCcEEEEcCC-CCCccccccccc----------------------------
Confidence 7999999999999999999999 99 99999995 455533211000
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
..+|. . ...+++..+.+.|.+.+++.|++++. .+|+++..+++ . +.|.+.+
T Consensus 47 --------~~~~~-~----~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~-~-~~v~~~~------------- 97 (311)
T 2q0l_A 47 --------ENYPG-V----KEVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDS-H-FVILAED------------- 97 (311)
T ss_dssp --------CCSTT-C----CSCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETT-E-EEEEETT-------------
T ss_pred --------ccCCC-C----cccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCC-E-EEEEEcC-------------
Confidence 00010 0 01256778899999999999999988 78999887653 2 2465555
Q ss_pred cCceEEEcCEEEEecCCCCc
Q 006778 267 QRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.||+|+|.++.
T Consensus 98 --g~~~~~~~vv~AtG~~~~ 115 (311)
T 2q0l_A 98 --GKTFEAKSVIIATGGSPK 115 (311)
T ss_dssp --SCEEEEEEEEECCCEEEC
T ss_pred --CCEEECCEEEECCCCCCC
Confidence 568999999999998764
No 106
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.03 E-value=5.2e-10 Score=116.02 Aligned_cols=115 Identities=20% Similarity=0.279 Sum_probs=82.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEee----CCCCCCccccccccChHhHHHHhhhhhhcCCCeeeec
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEK----GAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPV 181 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk----~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~ 181 (631)
..+||+|||||++|+++|+.|++. |++|+|||+ ....|+......
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~------g~~v~lie~~~~~~~~~gg~~~~~~------------------------- 55 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA------ELKPLLFEGWMANDIAPGGQLTTTT------------------------- 55 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCCEEECCSSBTTBCTTCGGGGCS-------------------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCeEEEEeccCccccCCCceeeecc-------------------------
Confidence 358999999999999999999999 999999998 333333211000
Q ss_pred cCcceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCC
Q 006778 182 SSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGS 261 (631)
Q Consensus 182 ~~~~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~ 261 (631)
.. . .+|.. ...+.+..+.+.|.+.+++.|++++.++ |+++..+++ .+ .|.+ +
T Consensus 56 ---~~---~-----~~~~~-----~~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~-~~-~v~~-~-------- 107 (333)
T 1vdc_A 56 ---DV---E-----NFPGF-----PEGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSK-PF-KLFT-D-------- 107 (333)
T ss_dssp ---EE---C-----CSTTC-----TTCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSS-SE-EEEC-S--------
T ss_pred ---cc---c-----cCCCC-----ccCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCC-EE-EEEE-C--------
Confidence 00 0 01100 0125677889999999999999999987 888876653 33 3555 4
Q ss_pred ccccccCceEEEcCEEEEecCCCCc
Q 006778 262 KKENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 262 ~~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++++|.||+|+|.++.
T Consensus 108 -------~~~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 108 -------SKAILADAVILAIGAVAK 125 (333)
T ss_dssp -------SEEEEEEEEEECCCEEEC
T ss_pred -------CcEEEcCEEEECCCCCcC
Confidence 578999999999998764
No 107
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.03 E-value=4.8e-09 Score=116.09 Aligned_cols=71 Identities=24% Similarity=0.310 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcE--EEEEeCCCccccCCCccccccCce-EEEcCEEEEecCCCCchh
Q 006778 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKV--IGIGTNDMGIAKDGSKKENFQRGV-ELRGRITLLAEGCRGSLS 288 (631)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v--~gV~~~d~g~~~~G~~~~~f~~g~-~i~a~~vV~A~G~~s~~~ 288 (631)
..+.+.|.+.+++.||+|+++++|+++..++++.+ +.|.+.+ |. ++.||.||+|+|.++...
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~---------------G~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPN---------------GEMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETT---------------EEEEEECSCEEECCCCEECCH
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECC---------------CcEEEEcCEEEECcCCccCCc
Confidence 35667788888899999999999999987665654 3566665 56 899999999999998654
Q ss_pred HHHHHHcCCC
Q 006778 289 EKLIKNFKLR 298 (631)
Q Consensus 289 ~~l~~~~g~~ 298 (631)
. +.+..|+.
T Consensus 320 ~-~l~~~gl~ 328 (523)
T 1mo9_A 320 E-LAKILGLD 328 (523)
T ss_dssp H-HHHHHTCC
T ss_pred c-CHHHcCCc
Confidence 3 55666665
No 108
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.01 E-value=8.8e-11 Score=129.88 Aligned_cols=147 Identities=16% Similarity=0.241 Sum_probs=86.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC--------CCCCccccccccChHhHHHHh---hhhhhcC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA--------EVGAHIISGNVFEPRALNELL---PQWKQEE 174 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~--------~~g~~~~~g~~i~~~~l~~l~---~~~~~~~ 174 (631)
-+||||||||||||+++|+.++++ |.+|+|||+.. .+|+.|++-+|++.+.|...- .......
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~------G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~ 114 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAH------GARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDS 114 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTT------TCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhh
Confidence 369999999999999999999999 99999999743 379999999999998875432 1111100
Q ss_pred CCeeeeccCcceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCC
Q 006778 175 APIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDM 254 (631)
Q Consensus 175 ~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~ 254 (631)
... .+.. ....++++..+..... ....+.......+++.||+++.+... + .+.+.| .|...+
T Consensus 115 ~~~-------Gi~~--~~~~~d~~~~~~~~~~---~v~~l~~~~~~~l~~~~V~~i~G~a~--f--~~~~~v-~V~~~~- 176 (542)
T 4b1b_A 115 KAY-------GWKF--DNLKHDWKKLVTTVQS---HIRSLNFSYMTGLRSSKVKYINGLAK--L--KDKNTV-SYYLKG- 176 (542)
T ss_dssp GGG-------TEEE--EEEEECHHHHHHHHHH---HHHHHHHHHHHHHHHTTCEEECEEEE--E--EETTEE-EEEEC--
T ss_pred Hhc-------Cccc--CcccccHHHHHHHHHH---HHHHHHHHHHHHHHhCCCEEEeeeEE--E--cCCCcc-eEeecc-
Confidence 000 0000 0000111100000000 00122233444556789999877643 2 222334 344332
Q ss_pred ccccCCCccccccCceEEEcCEEEEecCCCCc
Q 006778 255 GIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 255 g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
..+. +.+++||.+|+|||+++.
T Consensus 177 ---~~~~-------~~~i~a~~iiIATGs~P~ 198 (542)
T 4b1b_A 177 ---DLSK-------EETVTGKYILIATGCRPH 198 (542)
T ss_dssp ----CCC-------EEEEEEEEEEECCCEEEC
T ss_pred ---cCCc-------eEEEeeeeEEeccCCCCC
Confidence 1111 478999999999998775
No 109
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.01 E-value=4.9e-10 Score=122.62 Aligned_cols=137 Identities=25% Similarity=0.294 Sum_probs=86.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
.++||+||||||+|+++|+.|++. |++|+|||+.+.+|+.+.+.++++.+.+......+..... ......
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~------G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~----~~~~~g 73 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQL------GFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHT----EAQKRG 73 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH----TSGGGT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHH----HHHhcC
Confidence 468999999999999999999999 9999999998889988877777776655332222211100 000000
Q ss_pred eEeeccCCcccCCCCCCCCCcEEEeH-----------HHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCC
Q 006778 186 FWFLTKDRAFSLPSPFSNRGNYVISL-----------SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDM 254 (631)
Q Consensus 186 ~~~l~~~~~~~~p~~~~~~~~~~v~~-----------~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~ 254 (631)
+... . ...++. ..+...+.+.+++.|++++.++.+. .+.+. +.|.+.+
T Consensus 74 i~~~-~--------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~----~~~~~-v~V~~~~- 132 (478)
T 1v59_A 74 IDVN-G--------------DIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSF----EDETK-IRVTPVD- 132 (478)
T ss_dssp EEEC-S--------------CEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE----SSSSE-EEEECCT-
T ss_pred cccC-C--------------CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE----ccCCe-EEEEecC-
Confidence 1000 0 001111 2233445566677899999998763 12233 3465543
Q ss_pred ccccCCCccccccCceE------EEcCEEEEecCCCC
Q 006778 255 GIAKDGSKKENFQRGVE------LRGRITLLAEGCRG 285 (631)
Q Consensus 255 g~~~~G~~~~~f~~g~~------i~a~~vV~A~G~~s 285 (631)
|+ ..+ +++|.||+|||+++
T Consensus 133 -----G~-------~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 133 -----GL-------EGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp -----TC-------TTCCSSCEEEEEEEEEECCCEEE
T ss_pred -----CC-------cccccccceEEeCEEEECcCCCC
Confidence 21 034 99999999999876
No 110
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.00 E-value=4.6e-10 Score=122.20 Aligned_cols=151 Identities=21% Similarity=0.222 Sum_probs=89.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCC-----CeEEEEeeCCCCCCccc---cccccChHhHHHHhhhhhhcCCCe
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVD-----LSVCVVEKGAEVGAHII---SGNVFEPRALNELLPQWKQEEAPI 177 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G-----~~V~vlEk~~~~g~~~~---~g~~i~~~~l~~l~~~~~~~~~~~ 177 (631)
..+||||||||++||++|+.|++. | ++|+|||+.+.+|.+.. .+..+....+.++ .....|.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~------g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l----~~~~~p~ 98 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER------AQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDL----VSLRNPT 98 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH------HHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSS----STTTCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc------ccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhcc----ccccCCC
Confidence 358999999999999999999999 8 99999999998774321 1111110000000 0000000
Q ss_pred eeeccCcce-EeeccCC-cccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCC-CcEE--EEEeC
Q 006778 178 RVPVSSDKF-WFLTKDR-AFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDAD-NKVI--GIGTN 252 (631)
Q Consensus 178 ~~~~~~~~~-~~l~~~~-~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~-g~v~--gV~~~ 252 (631)
....+ .++.... ...++ ....+...+..+.++|...+++.+++++++++|+++..+++ +..+ .|.+.
T Consensus 99 ----~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~ 170 (463)
T 3s5w_A 99 ----SPYSFVNYLHKHDRLVDFI----NLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISR 170 (463)
T ss_dssp ----CTTSHHHHHHHTTCHHHHH----HHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEE
T ss_pred ----CCCChhHhhhhcCceeecc----cccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEe
Confidence 00000 0000000 00000 00122356788999999999988999999999999987632 3332 45554
Q ss_pred CCccccCCCccccccCceEEEcCEEEEecCCCC
Q 006778 253 DMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 253 d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s 285 (631)
+ .+|+ ..++.+|.||+|+|..+
T Consensus 171 ~----g~g~-------~~~~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 171 N----ADGE-------ELVRTTRALVVSPGGTP 192 (463)
T ss_dssp E----TTSC-------EEEEEESEEEECCCCEE
T ss_pred c----CCCc-------eEEEEeCEEEECCCCCC
Confidence 4 1121 13899999999999754
No 111
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.00 E-value=2.6e-10 Score=125.28 Aligned_cols=56 Identities=36% Similarity=0.626 Sum_probs=47.2
Q ss_pred cCccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHH
Q 006778 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNE 165 (631)
Q Consensus 104 ~~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ 165 (631)
+++++||+||||||||+++|+.|++. |++|+||||.+.+|+.+.+.++++.+.+..
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~~------G~~V~liEk~~~~GG~~~~~gciP~k~l~~ 77 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQL------GMKVAVVEKRSTYGGTCLNVGCIPSKALLH 77 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSHHHHHHSHHHHHHHHH
T ss_pred hcccCCEEEECCCHHHHHHHHHHHHC------CCeEEEEecCCCCCCccccccchhhHHHHH
Confidence 34579999999999999999999999 999999999989999888888887766543
No 112
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.00 E-value=1.2e-09 Score=113.20 Aligned_cols=53 Identities=36% Similarity=0.506 Sum_probs=44.0
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChH
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPR 161 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~ 161 (631)
..++||+|||||||||+||+.|++. ..|++|+||||.+.+|+.+..++++.++
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~----r~G~~V~viEk~~~~GG~~~~~~~~~~~ 115 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKN----RPDLKVCIIESSVAPGGGSWLGGQLFSA 115 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHH----CTTSCEEEECSSSSCCTTTTCCSTTCCC
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHh----CCCCeEEEEECCCCCCceEEeCCccCCH
Confidence 3479999999999999999999752 1299999999999999988777665543
No 113
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.99 E-value=2.1e-10 Score=125.12 Aligned_cols=135 Identities=19% Similarity=0.299 Sum_probs=85.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
++|||+|||||++|+++|+.|++. |++|+||||.+.+|+.+...++++.+.+......+..... ...
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~------G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~-----~~~-- 69 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKA------KYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTN-----IAN-- 69 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH-----HHC--
T ss_pred ccceEEEECCCHHHHHHHHHHHhC------CCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHh-----ccc--
Confidence 469999999999999999999999 9999999998899998887778776665333221111000 000
Q ss_pred eEeeccCCcccCCCCCCCCCcEEEeHHH---HH--HHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCC
Q 006778 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQ---LV--RWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDG 260 (631)
Q Consensus 186 ~~~l~~~~~~~~p~~~~~~~~~~v~~~~---l~--~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G 260 (631)
....++++ .+.-.... +. ..+.+.+++.|++++.+ .+..+. . +. +.|.+.+
T Consensus 70 -----~~~~~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id--~-~~-~~V~~~~------- 125 (466)
T 3l8k_A 70 -----VKIPLDFS-------TVQDRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKD--P-TH-VIVKTDE------- 125 (466)
T ss_dssp -----SCCCCCHH-------HHHHHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEE--T-TE-EEEEETT-------
T ss_pred -----CCCCcCHH-------HHHHHHHhheeccccchHHHHHHhCCCEEEEe-EEEEec--C-Ce-EEEEcCC-------
Confidence 00000000 00001111 22 45555566679999877 455543 2 22 3466554
Q ss_pred CccccccCceE--EEcCEEEEecCCCC
Q 006778 261 SKKENFQRGVE--LRGRITLLAEGCRG 285 (631)
Q Consensus 261 ~~~~~f~~g~~--i~a~~vV~A~G~~s 285 (631)
|.+ +.+|.+|+|+|+.+
T Consensus 126 --------g~~~~~~~d~lviAtG~~p 144 (466)
T 3l8k_A 126 --------GKEIEAETRYMIIASGAET 144 (466)
T ss_dssp --------SCEEEEEEEEEEECCCEEE
T ss_pred --------CcEEEEecCEEEECCCCCc
Confidence 456 99999999999754
No 114
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.98 E-value=1.5e-09 Score=112.84 Aligned_cols=115 Identities=23% Similarity=0.306 Sum_probs=81.7
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCc
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (631)
.+.+||+|||||++|+++|+.|++. |++|+|||+. .+|+.+.....+
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~-~~gg~~~~~~~~-------------------------- 58 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARA------QLAPLVFEGT-SFGGALMTTTDV-------------------------- 58 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHT------TCCCEEECCS-SCSCGGGSCSCB--------------------------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC------CCeEEEEecC-CCCCceeccchh--------------------------
Confidence 4568999999999999999999999 9999999975 455432110000
Q ss_pred ceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEE-EeCCCccccCCCcc
Q 006778 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGI-GTNDMGIAKDGSKK 263 (631)
Q Consensus 185 ~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV-~~~d~g~~~~G~~~ 263 (631)
..+|.. ...+.+..+.+.|.+.+++.|++++.++ |+++.. + +.+ .| .+.+
T Consensus 59 ----------~~~~~~-----~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~-~~~-~v~~~~~---------- 109 (335)
T 2a87_A 59 ----------ENYPGF-----RNGITGPELMDEMREQALRFGADLRMED-VESVSL-H-GPL-KSVVTAD---------- 109 (335)
T ss_dssp ----------CCSTTC-----TTCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-S-SSS-EEEEETT----------
T ss_pred ----------hhcCCC-----CCCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-C-CcE-EEEEeCC----------
Confidence 000100 0114567888889888989999999987 888876 3 222 34 5554
Q ss_pred ccccCceEEEcCEEEEecCCCCc
Q 006778 264 ENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 264 ~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.||+|+|.++.
T Consensus 110 -----g~~~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 110 -----GQTHRARAVILAMGAAAR 127 (335)
T ss_dssp -----SCEEEEEEEEECCCEEEC
T ss_pred -----CCEEEeCEEEECCCCCcc
Confidence 568999999999998764
No 115
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.97 E-value=2.4e-10 Score=124.66 Aligned_cols=143 Identities=23% Similarity=0.235 Sum_probs=85.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
++||+||||||||+++|+.|++. |++|+|+|+. .+|+.+.+.++++.+.+......+.... .......+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~------G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~----~~~~~~g~ 71 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL------GLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFT----KDAKAFGI 71 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHH----HHTTTTTE
T ss_pred cCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHH----HHHHhcCC
Confidence 58999999999999999999999 9999999998 6787766666666655433221111100 00000000
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
. ....++++...... .. ....+.+.+.+.+++.|++++.++.+. .++ +.+ .|.+.+
T Consensus 72 ~---~~~~~~~~~~~~~~-~~--~~~~l~~~l~~~~~~~gv~~~~g~~~~---id~-~~v-~V~~~~------------- 127 (464)
T 2a8x_A 72 S---GEVTFDYGIAYDRS-RK--VAEGRVAGVHFLMKKNKITEIHGYGTF---ADA-NTL-LVDLND------------- 127 (464)
T ss_dssp E---ECCEECHHHHHHHH-HH--HHHHHHHHHHHHHHHTTCEEECEEEEE---SSS-SEE-EEEETT-------------
T ss_pred C---CCCccCHHHHHHHH-HH--HHHHHHHHHHHHHHhCCCEEEEeEEEE---ecC-CeE-EEEeCC-------------
Confidence 0 00000000000000 00 013345556677777899999887653 233 333 466554
Q ss_pred cCc--eEEEcCEEEEecCCCCc
Q 006778 267 QRG--VELRGRITLLAEGCRGS 286 (631)
Q Consensus 267 ~~g--~~i~a~~vV~A~G~~s~ 286 (631)
| .++.+|.||+|||+++.
T Consensus 128 --G~~~~~~~d~lViAtG~~~~ 147 (464)
T 2a8x_A 128 --GGTESVTFDNAIIATGSSTR 147 (464)
T ss_dssp --SCCEEEEEEEEEECCCEEEC
T ss_pred --CceEEEEcCEEEECCCCCCC
Confidence 4 68999999999998764
No 116
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.96 E-value=6.7e-10 Score=121.69 Aligned_cols=53 Identities=34% Similarity=0.562 Sum_probs=46.0
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhH
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l 163 (631)
.+++||+|||||++|+++|+.|++. |++|+|||+.+.+|+.+.+.++++.+.+
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~------G~~V~liE~~~~~GG~~~~~g~~psk~l 56 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADE------GLKVAIVERYKTLGGVCLNVGCIPSKAL 56 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSCSSHHHHHHSHHHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCCCCCCceeeecccchHHH
Confidence 3469999999999999999999999 9999999998888888777677765554
No 117
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.94 E-value=2.2e-09 Score=117.07 Aligned_cols=144 Identities=21% Similarity=0.342 Sum_probs=85.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
.++||+|||||+||+++|+.|++. |++|+|||+.+.+|+.+.+.++++.+.+......+...... .....
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~------g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~----~~~~g 74 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQL------GFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHS----FANHG 74 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHT----HHHHT
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHH----HHhcC
Confidence 358999999999999999999999 99999999998899888777777665543221111100000 00000
Q ss_pred eEeeccCCcccCCCCCCCCCcEEEe----HHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCC
Q 006778 186 FWFLTKDRAFSLPSPFSNRGNYVIS----LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGS 261 (631)
Q Consensus 186 ~~~l~~~~~~~~p~~~~~~~~~~v~----~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~ 261 (631)
+.. ....++++ .+.-. ...+.+.+.+.+++.|++++.++.+. .+. +.+ .|.+.+ |+
T Consensus 75 ~~~--~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~-~~~-~v~~~~------G~ 134 (470)
T 1dxl_A 75 VKV--SNVEIDLA-------AMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF---VSP-SEI-SVDTIE------GE 134 (470)
T ss_dssp EEE--SCEEECHH-------HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE---EET-TEE-EECCSS------SC
T ss_pred ccc--CCCccCHH-------HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecC-CEE-EEEeCC------Cc
Confidence 000 00000000 00000 12244445666677899999998653 233 222 354433 21
Q ss_pred ccccccCceEEEcCEEEEecCCCCc
Q 006778 262 KKENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 262 ~~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
..++++|.||+|||.++.
T Consensus 135 -------~~~i~~d~lIiAtGs~p~ 152 (470)
T 1dxl_A 135 -------NTVVKGKHIIIATGSDVK 152 (470)
T ss_dssp -------CEEEECSEEEECCCEEEC
T ss_pred -------eEEEEcCEEEECCCCCCC
Confidence 168999999999998764
No 118
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.94 E-value=2e-09 Score=119.11 Aligned_cols=116 Identities=25% Similarity=0.397 Sum_probs=83.8
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCc
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (631)
...+||+||||||||+++|+.|++. |++|+|+|+. .|+.+.....+ .
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~------G~~v~lie~~--~GG~~~~~~~~-------------------------~ 256 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARK------GIRTGLMGER--FGGQVLDTVDI-------------------------E 256 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSS--TTGGGTTCSCB-------------------------C
T ss_pred cCcccEEEECCcHHHHHHHHHHHhC------CCeEEEEECC--CCCcccccccc-------------------------c
Confidence 3469999999999999999999999 9999999963 45432110000 0
Q ss_pred ceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCC-CcEEEEEeCCCccccCCCcc
Q 006778 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDAD-NKVIGIGTNDMGIAKDGSKK 263 (631)
Q Consensus 185 ~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~-g~v~gV~~~d~g~~~~G~~~ 263 (631)
.+ ...+ ......+...|.+.+++.|++++.+++|+++..+.+ +..+.|.+.+
T Consensus 257 --~~------~~~~---------~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~---------- 309 (521)
T 1hyu_A 257 --NY------ISVP---------KTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETAS---------- 309 (521)
T ss_dssp --CB------TTBS---------SBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETT----------
T ss_pred --cc------CCCC---------CCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECC----------
Confidence 00 0000 134567888899999999999999999999975422 2233577665
Q ss_pred ccccCceEEEcCEEEEecCCCC
Q 006778 264 ENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 264 ~~f~~g~~i~a~~vV~A~G~~s 285 (631)
|.++++|.||+|+|+++
T Consensus 310 -----g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 310 -----GAVLKARSIIIATGAKW 326 (521)
T ss_dssp -----SCEEEEEEEEECCCEEE
T ss_pred -----CCEEEcCEEEECCCCCc
Confidence 67899999999999865
No 119
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.93 E-value=1e-07 Score=103.80 Aligned_cols=40 Identities=33% Similarity=0.556 Sum_probs=37.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCC--CeEEEEeeCCCCCCcc
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVD--LSVCVVEKGAEVGAHI 152 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G--~~V~vlEk~~~~g~~~ 152 (631)
.+||+|||||++||++|+.|++. | ++|+|+|+.+.+|+.+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~------g~~~~v~v~E~~~~~GG~~ 45 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA------FPDLNITLLEAGERLGGKV 45 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH------CTTSEEEEECSSSSSBTTC
T ss_pred cccEEEECCCHHHHHHHHHHHHh------CCCCCEEEEECCCCCCcee
Confidence 47999999999999999999999 8 9999999998888754
No 120
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.93 E-value=1.5e-09 Score=111.66 Aligned_cols=114 Identities=18% Similarity=0.261 Sum_probs=80.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
+.+||+|||||++|+++|+.|++. |++|+|||+. .+|+.+.....
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~------g~~v~lie~~-~~gg~~~~~~~---------------------------- 48 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARA------NLQPVLITGM-EKGGQLTTTTE---------------------------- 48 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT------TCCCEEECCS-STTGGGGGCSB----------------------------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC------CCcEEEEccC-CCCceEecchh----------------------------
Confidence 468999999999999999999999 9999999975 45543211000
Q ss_pred eEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccc
Q 006778 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (631)
Q Consensus 186 ~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (631)
. ..+|.. ...+.+..+.+++.+.+++.|++++.++ ++.+..+++ .+ .| +.+
T Consensus 49 ~--------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~-~~-~v-~~~------------ 99 (320)
T 1trb_A 49 V--------ENWPGD-----PNDLTGPLLMERMHEHATKFETEIIFDH-INKVDLQNR-PF-RL-NGD------------ 99 (320)
T ss_dssp C--------CCSTTC-----CSSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSS-SE-EE-EES------------
T ss_pred h--------hhCCCC-----CCCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCC-EE-EE-EeC------------
Confidence 0 000100 0014567888888888999999999886 888876553 33 34 333
Q ss_pred ccCceEEEcCEEEEecCCCCc
Q 006778 266 FQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.||+|+|.++.
T Consensus 100 ---~~~~~~~~lv~AtG~~~~ 117 (320)
T 1trb_A 100 ---NGEYTCDALIIATGASAR 117 (320)
T ss_dssp ---SCEEEEEEEEECCCEEEC
T ss_pred ---CCEEEcCEEEECCCCCcC
Confidence 568999999999998654
No 121
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.93 E-value=1.5e-08 Score=109.97 Aligned_cols=58 Identities=14% Similarity=0.133 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHhcCcEEecCceEEEEEEcC-CCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCC
Q 006778 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDA-DNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~-~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s 285 (631)
..+.+.|.+.+++.|++|+++++|++|..+. ++++++|.+. |.++.||.||.|.|.++
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~----------------g~~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTK----------------LGTFKAPLVIADPTYFP 300 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEET----------------TEEEECSCEEECGGGCG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEEC----------------CeEEECCEEEECCCccc
Confidence 5788889999999999999999999998872 4677778764 57899999999999885
No 122
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.92 E-value=1.6e-09 Score=117.77 Aligned_cols=138 Identities=27% Similarity=0.331 Sum_probs=85.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
++||+|||||+||+++|+.|++. |++|+|||+. .+|+.+.+.++++.+.+......+..... .....+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~------g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~-----~~~~g~ 70 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQL------GQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKH-----SEEMGI 70 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHT-----CGGGTE
T ss_pred cCCEEEECCCHHHHHHHHHHHhC------CCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHH-----HHhcCc
Confidence 58999999999999999999999 9999999998 68887777677766654322111111000 000000
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeH-----HHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCC
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISL-----SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGS 261 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~-----~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~ 261 (631)
.+ ....++++ ..+.+ ..+.+.+.+.+++.|++++.++.+. + ++ +.+ .|.+.+
T Consensus 71 ~~--~~~~~~~~--------~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-i--d~-~~v-~V~~~~-------- 127 (455)
T 1ebd_A 71 KA--ENVTIDFA--------KVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF-V--DA-NTV-RVVNGD-------- 127 (455)
T ss_dssp EC--CSCEECHH--------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE-E--ET-TEE-EEEETT--------
T ss_pred cc--CCCccCHH--------HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-c--cC-CeE-EEEeCC--------
Confidence 00 00000000 00111 1244556667777899999998653 2 33 333 466554
Q ss_pred ccccccCc-eEEEcCEEEEecCCCCc
Q 006778 262 KKENFQRG-VELRGRITLLAEGCRGS 286 (631)
Q Consensus 262 ~~~~f~~g-~~i~a~~vV~A~G~~s~ 286 (631)
| .++.+|.+|+|+|.++.
T Consensus 128 -------G~~~i~~d~lViATGs~p~ 146 (455)
T 1ebd_A 128 -------SAQTYTFKNAIIATGSRPI 146 (455)
T ss_dssp -------EEEEEECSEEEECCCEEEC
T ss_pred -------CcEEEEeCEEEEecCCCCC
Confidence 4 67999999999998664
No 123
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.90 E-value=3.5e-09 Score=115.71 Aligned_cols=53 Identities=30% Similarity=0.545 Sum_probs=46.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHH
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALN 164 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~ 164 (631)
+++||+|||||+||+++|+.|++. |++|+|||+.+.+|+.+.+.++++.+.+.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~------g~~V~liE~~~~~GG~~~~~g~~Psk~l~ 57 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQL------GFKTVCIEKNETLGGTCLNVGCIPSKALL 57 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSSHHHHHHSHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCCCcCCcccccCccchHHHH
Confidence 468999999999999999999999 99999999998899988777777766553
No 124
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.88 E-value=2.9e-09 Score=116.87 Aligned_cols=52 Identities=21% Similarity=0.422 Sum_probs=45.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEee--------CCCCCCccccccccChHhH
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEK--------GAEVGAHIISGNVFEPRAL 163 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk--------~~~~g~~~~~g~~i~~~~l 163 (631)
++|||+||||||||+++|+.|++. |++|+|||| ...+|+.+.+.+|++.+.+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~------G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l 64 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQL------GKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLM 64 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC------CCeEEEEEecccccccccCCcCCeecccCCcccHHH
Confidence 579999999999999999999999 999999998 4568888887788876655
No 125
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.88 E-value=3.8e-09 Score=115.20 Aligned_cols=139 Identities=21% Similarity=0.281 Sum_probs=84.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHH---hhhhhhcCCCeeeeccC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNEL---LPQWKQEEAPIRVPVSS 183 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l---~~~~~~~~~~~~~~~~~ 183 (631)
++||+|||||+||+++|+.|++. |++|+|||+.+.+|+.+.+.++++.+.+... +..+... ...
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~------g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~-------~~~ 68 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL------GMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHAN-------FAR 68 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHT-------HHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHH-------HHh
Confidence 58999999999999999999999 9999999999889988877777766554321 1111100 000
Q ss_pred cceEeeccCCcccCCCCCCCCCcEEEe----HHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccC
Q 006778 184 DKFWFLTKDRAFSLPSPFSNRGNYVIS----LSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKD 259 (631)
Q Consensus 184 ~~~~~l~~~~~~~~p~~~~~~~~~~v~----~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~ 259 (631)
..+.. .....++++ ...-. ...+...+.+.+++.|++++.++.+. + +. +.+ .|.+.+
T Consensus 69 ~g~~~-~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~-i--~~-~~~-~v~~~~------ 129 (468)
T 2qae_A 69 YGLMG-GEGVTMDSA-------KMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSF-E--TA-HSI-RVNGLD------ 129 (468)
T ss_dssp HTEEC-GGGCEECHH-------HHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEE-E--ET-TEE-EEEETT------
T ss_pred cCccc-CCCCccCHH-------HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-e--eC-CEE-EEEecC------
Confidence 00000 000000000 00000 01233345566677899999887542 2 33 333 465544
Q ss_pred CCccccccCc--eEEEcCEEEEecCCCCc
Q 006778 260 GSKKENFQRG--VELRGRITLLAEGCRGS 286 (631)
Q Consensus 260 G~~~~~f~~g--~~i~a~~vV~A~G~~s~ 286 (631)
| .++.+|.+|+|+|+++.
T Consensus 130 ---------G~~~~~~~d~lviAtG~~p~ 149 (468)
T 2qae_A 130 ---------GKQEMLETKKTIIATGSEPT 149 (468)
T ss_dssp ---------SCEEEEEEEEEEECCCEEEC
T ss_pred ---------CceEEEEcCEEEECCCCCcC
Confidence 4 68999999999997653
No 126
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.87 E-value=1e-09 Score=120.05 Aligned_cols=52 Identities=35% Similarity=0.613 Sum_probs=42.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC------CCCccccccccChHhH
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE------VGAHIISGNVFEPRAL 163 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~------~g~~~~~g~~i~~~~l 163 (631)
++|||+|||||++|+++|+.|++. |++|+||||.+. +|+.+...+|++.+.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~------G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l 59 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQL------GLKTALIEKYKGKEGKTALGGTCLNVGCIPSKAL 59 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH------TCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC------CCEEEEEeCCCccCCCCCcCCccccccHHHHHHH
Confidence 369999999999999999999999 999999999874 4544444455555544
No 127
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.87 E-value=1e-08 Score=112.74 Aligned_cols=47 Identities=34% Similarity=0.534 Sum_probs=40.4
Q ss_pred cccCccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccc
Q 006778 102 CRESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (631)
Q Consensus 102 ~~~~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~ 153 (631)
.+..+++||||||||++||+||+.|++. .|.+|+|+|+++.+||.+.
T Consensus 5 s~p~~~~DVvIIGaGisGLsaA~~L~k~-----~G~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 5 THPDISVDVLVIGAGPTGLGAAKRLNQI-----DGPSWMIVDSNETPGGLAS 51 (513)
T ss_dssp -CCSEEEEEEEECCSHHHHHHHHHHHHH-----CCSCEEEEESSSSCCGGGC
T ss_pred CCCCCCCCEEEECCcHHHHHHHHHHHhh-----CCCCEEEEECCCCCcCCee
Confidence 3345689999999999999999999874 2999999999999999653
No 128
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.86 E-value=1e-08 Score=104.94 Aligned_cols=113 Identities=21% Similarity=0.262 Sum_probs=79.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEE-EeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCV-VEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~v-lEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
.+||+|||||+|||++|+.|++. |++|+| +|| +.+|+.......+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~------g~~v~li~e~-~~~gG~~~~~~~~--------------------------- 49 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG------GLKNVVMFEK-GMPGGQITSSSEI--------------------------- 49 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH------TCSCEEEECS-SSTTGGGGGCSCB---------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHC------CCCeEEEEeC-CCCCceeeeecee---------------------------
Confidence 58999999999999999999999 999999 999 5566542211000
Q ss_pred eEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCC-CcEEEEEeCCCccccCCCccc
Q 006778 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDAD-NKVIGIGTNDMGIAKDGSKKE 264 (631)
Q Consensus 186 ~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~-g~v~gV~~~d~g~~~~G~~~~ 264 (631)
..+|.. ...+...++..++.+.+++.|++++.+ +|+++ .+++ +.+ .|.+..
T Consensus 50 ---------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~-~v~~~~----------- 101 (315)
T 3r9u_A 50 ---------ENYPGV-----AQVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSF-TIKLEG----------- 101 (315)
T ss_dssp ---------CCSTTC-----CSCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCE-EEEETT-----------
T ss_pred ---------ccCCCC-----CCCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcE-EEEEec-----------
Confidence 000100 012456788999999999999999988 88888 5541 222 332322
Q ss_pred cccCceEEEcCEEEEecCCCC
Q 006778 265 NFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 265 ~f~~g~~i~a~~vV~A~G~~s 285 (631)
++ ++.+|.||+|+|..+
T Consensus 102 ---~~-~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 102 ---GK-TELAKAVIVCTGSAP 118 (315)
T ss_dssp ---SC-EEEEEEEEECCCEEE
T ss_pred ---CC-EEEeCEEEEeeCCCC
Confidence 14 899999999999754
No 129
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.86 E-value=3e-09 Score=117.60 Aligned_cols=52 Identities=25% Similarity=0.443 Sum_probs=45.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC--------CCCCccccccccChHhH
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA--------EVGAHIISGNVFEPRAL 163 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~--------~~g~~~~~g~~i~~~~l 163 (631)
.+|||+||||||||+++|+.|++. |++|+||||.+ .+|+.+.+.+|++.+.+
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~------G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l 90 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQY------GKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLM 90 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT------TCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC------CCeEEEEeccCccccccCCCcccccCCcCccchHHH
Confidence 469999999999999999999999 99999999954 67888877778876654
No 130
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.86 E-value=6.6e-09 Score=114.28 Aligned_cols=140 Identities=19% Similarity=0.236 Sum_probs=84.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCC-CCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNV-DLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~-G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
++||||||||++|+++|+.|++. .| |++|+|||+.+ +|+.+.+.++++.+.+......+..... .....
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~----~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~-----~~~~g 71 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATS----HPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRR-----APHLG 71 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH----CTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTT-----TTTTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhC----CCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHH-----HHhCC
Confidence 58999999999999999999997 34 89999999988 8888777777776655332221111100 00000
Q ss_pred eEeeccCCcccCCCCCCCCCcEEEeHH-----------HHHHHHHHHHHhcCcEEecCceEEEEEEcC--CCcEEEEEeC
Q 006778 186 FWFLTKDRAFSLPSPFSNRGNYVISLS-----------QLVRWLGGKAEELGVEIYPGFAASEILYDA--DNKVIGIGTN 252 (631)
Q Consensus 186 ~~~l~~~~~~~~p~~~~~~~~~~v~~~-----------~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~--~g~v~gV~~~ 252 (631)
+.+... ...++.. .+...+.+.+++.|++++.++ ++.+..++ ++..+.|.+.
T Consensus 72 ~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~ 136 (499)
T 1xdi_A 72 FHIDFD--------------DAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATAA 136 (499)
T ss_dssp BC--------------------CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEECT
T ss_pred CccccC--------------CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeC
Confidence 000000 0001111 244456667778899999886 54443210 0122345544
Q ss_pred CCccccCCCccccccCce--EEEcCEEEEecCCCCc
Q 006778 253 DMGIAKDGSKKENFQRGV--ELRGRITLLAEGCRGS 286 (631)
Q Consensus 253 d~g~~~~G~~~~~f~~g~--~i~a~~vV~A~G~~s~ 286 (631)
+ |. ++.+|.+|+|+|..+.
T Consensus 137 ~---------------g~~~~~~~d~lviATGs~p~ 157 (499)
T 1xdi_A 137 D---------------GSTSEHEADVVLVATGASPR 157 (499)
T ss_dssp T---------------SCEEEEEESEEEECCCEEEC
T ss_pred C---------------CcEEEEEeCEEEEcCCCCCC
Confidence 3 33 7999999999997653
No 131
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.86 E-value=3.6e-09 Score=115.74 Aligned_cols=51 Identities=20% Similarity=0.417 Sum_probs=45.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhH
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l 163 (631)
.++||+|||||++|+++|+.|++. |++|+|||++ .+|+.+.+.+|++.+.+
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~------g~~V~liE~~-~~GG~~~n~gciP~k~l 60 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY------GAKTLLVEAK-ALGGTCVNVGCVPKKVM 60 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------SCCEEEEESS-CTTHHHHHHSHHHHHHH
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC------CCcEEEEeCC-CcCCcCcccCcHHHHHH
Confidence 469999999999999999999998 9999999997 58888877777776655
No 132
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.85 E-value=3.6e-09 Score=115.37 Aligned_cols=52 Identities=19% Similarity=0.424 Sum_probs=45.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHH
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALN 164 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~ 164 (631)
..+||+|||||++|+++|+.|++. |++|+|||+. .+|+.+.+.++++.+.+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~------g~~V~lie~~-~~GG~~~~~g~ip~k~l~ 54 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQ------GAQVTLIERG-TIGGTCVNVGCVPSKIMI 54 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESS-STTHHHHHHSHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC-CCCccccCCCccchHHHH
Confidence 368999999999999999999999 9999999998 689888877887776653
No 133
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.84 E-value=2e-08 Score=108.66 Aligned_cols=58 Identities=17% Similarity=0.162 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCC
Q 006778 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (631)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~ 284 (631)
+.|.+.|.+.+++.|++|+.+++|++|..++++++++|++.+ |.+++||.||.|.|..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~---------------G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSD---------------GEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETT---------------SCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECC---------------CcEEECCEEEECCCcc
Confidence 678888999999999999999999999985567888999886 6789999999999976
No 134
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.84 E-value=4.5e-09 Score=115.64 Aligned_cols=157 Identities=20% Similarity=0.311 Sum_probs=93.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhccc--------CCCCCeEEEEeeCCCCCCcc---ccccccChHhHHHHhhhhhhcC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCRE--------KNVDLSVCVVEKGAEVGAHI---ISGNVFEPRALNELLPQWKQEE 174 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~--------~~~G~~V~vlEk~~~~g~~~---~~g~~i~~~~l~~l~~~~~~~~ 174 (631)
.-|||||||+||+||++|++|.+...+ ...+..++.+||.+..+.|. ..|..++...+.++ -...
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dl----vtl~ 113 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDL----ATLR 113 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSS----STTT
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhh----cccc
Confidence 358999999999999999999875211 12345788899988777643 11222211111110 0000
Q ss_pred CCeeeeccCcce-Eeecc-CCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCC------cE
Q 006778 175 APIRVPVSSDKF-WFLTK-DRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADN------KV 246 (631)
Q Consensus 175 ~~~~~~~~~~~~-~~l~~-~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g------~v 246 (631)
.| .....+ .++.. .+-.. +.+...+...|.++.++|...|++.+..|.++++|+++...+++ ..
T Consensus 114 ~P----~s~~sf~~yl~~~~rl~~----f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~ 185 (501)
T 4b63_A 114 DP----RSSFTFLNYLHQKGRLIH----FTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDF 185 (501)
T ss_dssp CT----TCTTSHHHHHHHHTCHHH----HHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCE
T ss_pred CC----CCccchHHHHHHhCCccC----CccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccce
Confidence 00 000000 00100 00001 11223445789999999999999988889999999999876532 24
Q ss_pred EEEEeCCCccccCCCccccccCceEEEcCEEEEecCCC
Q 006778 247 IGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCR 284 (631)
Q Consensus 247 ~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~ 284 (631)
+.|++.+ ..+|+ ..++.|+.||+|+|..
T Consensus 186 ~~V~~~~---~~~g~-------~~~~~ar~vVlatG~~ 213 (501)
T 4b63_A 186 FTVRSRN---VETGE-------ISARRTRKVVIAIGGT 213 (501)
T ss_dssp EEEEEEE---TTTCC-------EEEEEEEEEEECCCCE
T ss_pred EEEEEec---CCCce-------EEEEEeCEEEECcCCC
Confidence 5677665 12333 3679999999999943
No 135
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.84 E-value=5e-09 Score=113.84 Aligned_cols=138 Identities=27% Similarity=0.313 Sum_probs=83.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
+|||+||||||||+++|+.|++. |++|+|||+.+.+|+.+.+.++++.+.+......+..... ....+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~------g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~------~~~g~ 68 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQL------GMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK------GLLGA 68 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH------CCTTE
T ss_pred CCCEEEECCChhHHHHHHHHHHC------CCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh------hcCCc
Confidence 37999999999999999999999 9999999999889988877777776655332211111000 00000
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeH----HHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISL----SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSK 262 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~----~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~ 262 (631)
.+ ....++++ ...-.+ ..+...+.+.+++.|++++.++.+. .+. +.+ .|.+ +
T Consensus 69 ~~--~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~---i~~-~~~-~v~~-~--------- 124 (455)
T 2yqu_A 69 KV--KGVELDLP-------ALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARF---LSE-RKV-LVEE-T--------- 124 (455)
T ss_dssp EE--CCEEECHH-------HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE---SSS-SEE-EETT-T---------
T ss_pred cc--CCCccCHH-------HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecC-CeE-EEee-C---------
Confidence 00 00000000 000001 1233334556667899999887542 222 322 3433 3
Q ss_pred cccccCceEEEcCEEEEecCCCCc
Q 006778 263 KENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 263 ~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.+|+|+|.++.
T Consensus 125 ------g~~~~~d~lviAtG~~p~ 142 (455)
T 2yqu_A 125 ------GEELEARYILIATGSAPL 142 (455)
T ss_dssp ------CCEEEEEEEEECCCEEEC
T ss_pred ------CEEEEecEEEECCCCCCC
Confidence 467999999999998653
No 136
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.82 E-value=9e-10 Score=120.04 Aligned_cols=142 Identities=15% Similarity=0.166 Sum_probs=82.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
++|||+||||||+|+++|+.|++. |++|+|||| ..+|+.+...++++.+.+........... ......
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~------G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~-----~~~~~g 71 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAAL------GKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFE-----DAAGFG 71 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT------TCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHH-----HGGGGT
T ss_pred CCCcEEEECcCHHHHHHHHHHHhC------CCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHH-----HHHhcC
Confidence 369999999999999999999999 999999999 66898887777777665532211111000 000000
Q ss_pred eEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEe-CCCccccCCCccc
Q 006778 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGT-NDMGIAKDGSKKE 264 (631)
Q Consensus 186 ~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~-~d~g~~~~G~~~~ 264 (631)
+.. ....++++..... ..-....+..++.+.+++.|++++.+. +..+ +.. .|.+ .+
T Consensus 72 ~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i---~~~---~v~~~~~----------- 128 (463)
T 4dna_A 72 WTV--GESRFDWAKLVAA---KEQEIARLEGLYRKGLANAGAEILDTR-AELA---GPN---TVKLLAS----------- 128 (463)
T ss_dssp EEE--CCCEECHHHHHHH---HHHHHHHHHHHHHHHHHHHTCEEEESC-EEES---SSS---EEEETTT-----------
T ss_pred ccc--CCCCcCHHHHHHH---HHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEe---eCC---EEEEecC-----------
Confidence 000 0000000000000 000012344556666777899999883 3222 222 2444 22
Q ss_pred cccCceEEEcCEEEEecCCCCc
Q 006778 265 NFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 265 ~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
+.++.+|.+|+|+|.++.
T Consensus 129 ----~~~~~~d~lviAtG~~p~ 146 (463)
T 4dna_A 129 ----GKTVTAERIVIAVGGHPS 146 (463)
T ss_dssp ----TEEEEEEEEEECCCEEEC
T ss_pred ----CeEEEeCEEEEecCCCcc
Confidence 578999999999997654
No 137
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.82 E-value=1.9e-09 Score=117.88 Aligned_cols=53 Identities=25% Similarity=0.480 Sum_probs=45.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHH
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNE 165 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~ 165 (631)
..+||+||||||+|+++|+.|++. |++|+|||+. .+|+.+.+.+|++.+.+..
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~------G~~V~liE~~-~~GG~~~~~gc~p~k~l~~ 71 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL------GARAAVVESH-KLGGTCVNVGCVPKKVMWN 71 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CTTHHHHHHSHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC------CCeEEEEecC-CCCCcccccCccchHHHHH
Confidence 469999999999999999999999 9999999976 6888887777877766543
No 138
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.81 E-value=9.4e-09 Score=112.63 Aligned_cols=137 Identities=17% Similarity=0.246 Sum_probs=82.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhh---hhhhc-CCCeeeecc
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLP---QWKQE-EAPIRVPVS 182 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~---~~~~~-~~~~~~~~~ 182 (631)
+|||+|||||++||++|+.|++. |++|+|||| ..+|+.+...+|++.+.+..... .+... ...+. ..
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~------G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~--~~ 96 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL------GKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWK--YA 96 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT------TCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBC--CC
T ss_pred CCCEEEECcCHHHHHHHHHHHhC------cCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcc--cC
Confidence 69999999999999999999999 999999999 56888887777777665432211 11110 00000 00
Q ss_pred CcceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeC-CCccccCCC
Q 006778 183 SDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTN-DMGIAKDGS 261 (631)
Q Consensus 183 ~~~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~-d~g~~~~G~ 261 (631)
...++++..+.. ..-....+..++.+.+++.|++++.+. +..+ +. .. |.+. +
T Consensus 97 ---------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~i--~~-~~---v~v~~~-------- 149 (484)
T 3o0h_A 97 ---------DPIFNWEKLVAA---KNKEISRLEGLYREGLQNSNVHIYESR-AVFV--DE-HT---LELSVT-------- 149 (484)
T ss_dssp ---------CCEECHHHHHHH---HHHHHHHHHHHHHHHHHHTTCEEEESC-EEEE--ET-TE---EEETTT--------
T ss_pred ---------CCccCHHHHHHH---HHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe--eC-CE---EEEecC--------
Confidence 000000000000 000012444556666777899999884 3333 22 22 4443 3
Q ss_pred ccccccCceEEEcCEEEEecCCCCc
Q 006778 262 KKENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 262 ~~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
+.++.+|.+|+|+|..+.
T Consensus 150 -------~~~~~~d~lviAtG~~p~ 167 (484)
T 3o0h_A 150 -------GERISAEKILIATGAKIV 167 (484)
T ss_dssp -------CCEEEEEEEEECCCEEEC
T ss_pred -------CeEEEeCEEEEccCCCcc
Confidence 568999999999997654
No 139
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.80 E-value=1.2e-08 Score=112.08 Aligned_cols=53 Identities=28% Similarity=0.369 Sum_probs=47.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHH
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNEL 166 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l 166 (631)
+|||+||||||||+++|+.|++. |++|+||||.. +|+.+.+.+|++.+.+...
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~------G~~V~liE~~~-~GGtc~~~gciPsk~l~~~ 60 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKH------TDKVVLIEGGA-YGTTCARVGCMPSKLLIAA 60 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT------CSCEEEEESSC-SSCHHHHHSHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC------CCcEEEEeCCC-CCCcccccChhcCHHHHHH
Confidence 59999999999999999999999 99999999975 8998888888888776443
No 140
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.78 E-value=2.3e-09 Score=116.86 Aligned_cols=51 Identities=18% Similarity=0.436 Sum_probs=44.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhH
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l 163 (631)
.++||+|||||++|+++|+.|++. |++|+|||+. .+|+.+.+.+|++.+.+
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~------g~~V~liE~~-~~GG~~~~~gciP~k~l 53 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAF------GKRVALIESK-ALGGTCVNVGCVPKKVM 53 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CTTHHHHHHSHHHHHHH
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC------CCcEEEEcCC-CCCCcCcCcCchhHHHH
Confidence 368999999999999999999998 9999999998 67887777677766554
No 141
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.77 E-value=2.8e-08 Score=107.97 Aligned_cols=51 Identities=31% Similarity=0.552 Sum_probs=44.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhH
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l 163 (631)
.++||+|||||+||+++|+.|++. |++|+|||+ ..+|+.+..-++++.+.+
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~------g~~V~lie~-~~~GG~~~~~g~~Psk~l 54 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQL------GIPTVLVEG-QALGGTCLNIGCIPSKAL 54 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHH------TCCEEEECS-SCTTHHHHHHSHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCEEEEEcc-CCCCCcCCCcCcHhHHHH
Confidence 358999999999999999999999 999999999 678888776677766554
No 142
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.77 E-value=9.6e-09 Score=112.49 Aligned_cols=52 Identities=21% Similarity=0.378 Sum_probs=43.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC---------CCCCccccccccChHhH
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA---------EVGAHIISGNVFEPRAL 163 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~---------~~g~~~~~g~~i~~~~l 163 (631)
.+|||+||||||||+++|+.|++. |++|+||||.. .+|+.+.+.+|++.+.+
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~------G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l 68 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLN------GARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLM 68 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT------TCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCEEEEEEeccccccccccCCcCCeecccCchhhHHH
Confidence 469999999999999999999999 99999999521 27888777777776655
No 143
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.77 E-value=1.8e-08 Score=109.81 Aligned_cols=50 Identities=42% Similarity=0.723 Sum_probs=44.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhH
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l 163 (631)
++||+|||||+||+++|..|++. |++|+|||+.+ +|+.+.+.++++.+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~------g~~V~lie~~~-~GG~~~~~g~iP~k~l 55 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL------GLKVLAVEAGE-VGGVCLNVGCIPTKAL 55 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSC-TTHHHHHTSHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC------CCeEEEEeCCC-CCCCCCCcChHHHHHH
Confidence 58999999999999999999999 99999999987 8888877777776654
No 144
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.75 E-value=1.4e-08 Score=110.26 Aligned_cols=51 Identities=18% Similarity=0.408 Sum_probs=45.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhH
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l 163 (631)
.++||+|||||++|+++|+.|++. |++|+|||+. .+|+.+.+.+|++.+.+
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~------g~~V~liE~~-~~GG~~~~~gciP~k~l 53 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMY------GQKCALIEAK-ELGGTCVNVGCVPKKVM 53 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTT------TCCEEEEESS-CTTHHHHHHSHHHHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhC------CCeEEEEcCC-CCCCcccccCccChHHH
Confidence 368999999999999999999998 9999999998 68888877778876655
No 145
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.75 E-value=7.8e-09 Score=111.51 Aligned_cols=111 Identities=22% Similarity=0.272 Sum_probs=72.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCC--eEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSS 183 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~--~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~ 183 (631)
+.+||||||||+||+++|..|++. |. +|+|||+.+.+..... .+ ...+.... ..
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~------g~~~~V~lie~~~~~~~~~~--------~l---~~~~~~~~------~~- 58 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRAS------GWEGNIRLVGDATVIPHHLP--------PL---SKAYLAGK------AT- 58 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSCCSCCBCSG--------GG---GTTTTTTC------SC-
T ss_pred CCCcEEEEcCHHHHHHHHHHHHcc------CcCCCEEEEECCCCCCCcCC--------CC---cHHHhCCC------CC-
Confidence 468999999999999999999998 87 8999998865432100 00 00000000 00
Q ss_pred cceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcc
Q 006778 184 DKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (631)
Q Consensus 184 ~~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~ 263 (631)
...+.+ .+.+.+++.|++++.+++|+.+..++ . .|.+.+
T Consensus 59 --------~~~~~~-------------------~~~~~~~~~gv~~~~~~~v~~i~~~~-~---~v~~~~---------- 97 (431)
T 1q1r_A 59 --------AESLYL-------------------RTPDAYAAQNIQLLGGTQVTAINRDR-Q---QVILSD---------- 97 (431)
T ss_dssp --------SGGGBS-------------------SCHHHHHHTTEEEECSCCEEEEETTT-T---EEEETT----------
T ss_pred --------hHHhcc-------------------cCHHHHHhCCCEEEeCCEEEEEECCC-C---EEEECC----------
Confidence 000000 01233456799999999999887654 2 356655
Q ss_pred ccccCceEEEcCEEEEecCCCCc
Q 006778 264 ENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 264 ~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.||+|+|.++.
T Consensus 98 -----g~~~~~d~lviAtG~~p~ 115 (431)
T 1q1r_A 98 -----GRALDYDRLVLATGGRPR 115 (431)
T ss_dssp -----SCEEECSEEEECCCEEEC
T ss_pred -----CCEEECCEEEEcCCCCcc
Confidence 578999999999998764
No 146
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.73 E-value=3.3e-08 Score=110.08 Aligned_cols=72 Identities=15% Similarity=0.299 Sum_probs=52.3
Q ss_pred HHHHHHHHHHhcCcEEecCceEEEEEEcC---CCcEEEEEeCCCccccCCCccccccCceEEEcC-EEEEecCCCCchhH
Q 006778 214 LVRWLGGKAEELGVEIYPGFAASEILYDA---DNKVIGIGTNDMGIAKDGSKKENFQRGVELRGR-ITLLAEGCRGSLSE 289 (631)
Q Consensus 214 l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~---~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~-~vV~A~G~~s~~~~ 289 (631)
...+|...+.+.+++|+.++.|++|++++ +++++||++.+ ++|+. .+++|+ -||+|+|+.. ..
T Consensus 229 a~ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~----~~G~~-------~~v~A~kEVILsAGa~~--SP 295 (583)
T 3qvp_A 229 AREWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGT----HKGNT-------HNVYAKHEVLLAAGSAV--SP 295 (583)
T ss_dssp HHHHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEES----STTCE-------EEEEEEEEEEECSCTTT--HH
T ss_pred HHHHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEe----cCCcE-------EEEEECCEEEEeCCccC--CH
Confidence 33445444456689999999999999984 46888998763 34442 678896 6999999987 46
Q ss_pred HHHHHcCCC
Q 006778 290 KLIKNFKLR 298 (631)
Q Consensus 290 ~l~~~~g~~ 298 (631)
+|....|+-
T Consensus 296 qLL~lSGIG 304 (583)
T 3qvp_A 296 TILEYSGIG 304 (583)
T ss_dssp HHHHHTTBS
T ss_pred HHHHHcCCC
Confidence 666666654
No 147
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.72 E-value=1.6e-08 Score=111.14 Aligned_cols=51 Identities=27% Similarity=0.571 Sum_probs=43.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhH
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRAL 163 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l 163 (631)
|+|||||||||+||+++|+.|++. |++|+|||++. +|+.+.+.+|++.+.+
T Consensus 1 m~~dVvIIGgG~aGl~aA~~l~~~------g~~V~liE~~~-~GG~c~~~gc~P~k~l 51 (500)
T 1onf_A 1 MVYDLIVIGGGSGGMAAARRAARH------NAKVALVEKSR-LGGTCVNVGCVPKKIM 51 (500)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHT------TCCEEEEESSS-TTHHHHHTSHHHHHHH
T ss_pred CccCEEEECCCHHHHHHHHHHHHC------CCcEEEEeCCC-cCccccccCCcchHHH
Confidence 368999999999999999999998 99999999984 7888777777766554
No 148
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.72 E-value=3.7e-08 Score=105.19 Aligned_cols=111 Identities=24% Similarity=0.364 Sum_probs=89.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
...|+|||+|..|+.+|..|++. |.+|+++|+.+.+....
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtvv~~~~~~~~~~---------------------------------- 181 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAK------GLEVDVVELAPRVMARV---------------------------------- 181 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSTTTTT----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCCcchhhc----------------------------------
Confidence 35799999999999999999999 99999999987542200
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
+ ...+.+.+.+.+++.||++++++.|+++..++ +++.+|.+.|
T Consensus 182 ----------~-------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~V~~~d------------- 224 (404)
T 3fg2_P 182 ----------V-------------TPEISSYFHDRHSGAGIRMHYGVRATEIAAEG-DRVTGVVLSD------------- 224 (404)
T ss_dssp ----------S-------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETT-------------
T ss_pred ----------c-------------CHHHHHHHHHHHHhCCcEEEECCEEEEEEecC-CcEEEEEeCC-------------
Confidence 0 02456677888888999999999999998765 6777888877
Q ss_pred cCceEEEcCEEEEecCCCCchhHHHHHHcCCC
Q 006778 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~ 298 (631)
|.++.||.||.|+|..+.. .+.+..++.
T Consensus 225 --G~~i~aD~Vv~a~G~~p~~--~l~~~~gl~ 252 (404)
T 3fg2_P 225 --GNTLPCDLVVVGVGVIPNV--EIAAAAGLP 252 (404)
T ss_dssp --SCEEECSEEEECCCEEECC--HHHHHTTCC
T ss_pred --CCEEEcCEEEECcCCccCH--HHHHhCCCC
Confidence 7789999999999988753 456677776
No 149
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.71 E-value=2.8e-08 Score=107.89 Aligned_cols=114 Identities=18% Similarity=0.206 Sum_probs=72.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
+||||||||+||+++|..|++. .+|.+|+|||+.+.+|... ++ +...+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~----~~g~~V~vie~~~~~g~~~-~~-------~~~~~-------------------- 50 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKK----YPQAEISLIDKQATVGYLS-GG-------LSAYF-------------------- 50 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CSSSEEEEECSSSCCSSCC-C---------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhh----CcCCcEEEEECCCCCcccC-cc-------chhhh--------------------
Confidence 6999999999999999999997 4589999999998765311 00 00000
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccccc
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~ 267 (631)
.. .. + ....+...+.+.+++.|++++.+++|+++..++ +.+ .+...+
T Consensus 51 --~~--~~--~-----------~~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~-~~v-~v~~~~-------------- 97 (452)
T 3oc4_A 51 --NH--TI--N-----------ELHEARYITEEELRRQKIQLLLNREVVAMDVEN-QLI-AWTRKE-------------- 97 (452)
T ss_dssp ---------------------------CCCCHHHHHHTTEEEECSCEEEEEETTT-TEE-EEEETT--------------
T ss_pred --cC--CC--C-----------CHHHhhcCCHHHHHHCCCEEEECCEEEEEECCC-CEE-EEEecC--------------
Confidence 00 00 0 000000012334456799999999999987665 332 343121
Q ss_pred CceEEEcCEEEEecCCCCc
Q 006778 268 RGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s~ 286 (631)
++.++.+|.+|+|+|+++.
T Consensus 98 ~~~~~~~d~lviAtG~~p~ 116 (452)
T 3oc4_A 98 EQQWYSYDKLILATGASQF 116 (452)
T ss_dssp EEEEEECSEEEECCCCCBC
T ss_pred ceEEEEcCEEEECCCcccC
Confidence 1578999999999998764
No 150
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.71 E-value=3.8e-08 Score=107.92 Aligned_cols=52 Identities=27% Similarity=0.461 Sum_probs=45.0
Q ss_pred cccEEEECCCHHHHHHHHHHHh-hcccCCCCCeEEEEe--------eCCCCCCccccccccChHhHH
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQ-LCREKNVDLSVCVVE--------KGAEVGAHIISGNVFEPRALN 164 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~-~~~~~~~G~~V~vlE--------k~~~~g~~~~~g~~i~~~~l~ 164 (631)
+|||+|||||++|+++|+.|++ . |++|+||| +...+|+.+.+.+|++.+.+.
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~------G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~ 63 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLH------KKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMV 63 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHH------CCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHH
T ss_pred cccEEEECCCHHHHHHHHHHHHHc------CCEEEEEecccccccccCCCcCccccCCCcchhhHHH
Confidence 5899999999999999999999 9 99999999 355688888877888766553
No 151
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.70 E-value=5.5e-08 Score=104.25 Aligned_cols=111 Identities=24% Similarity=0.328 Sum_probs=89.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
...|+|||+|..|+.+|..|++. |.+|+++|+.+.+....
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtvv~~~~~~l~~~---------------------------------- 191 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKF------GVNVTLLEALPRVLARV---------------------------------- 191 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSTTTTT----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhc------CCeEEEEecCCchhhhh----------------------------------
Confidence 35799999999999999999999 99999999987542200
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
....+.+.+.+.+++.||+|++++.|+++..++ +++.+|.+.|
T Consensus 192 -----------------------~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~v~l~d------------- 234 (415)
T 3lxd_A 192 -----------------------AGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG-TKVTGVRMQD------------- 234 (415)
T ss_dssp -----------------------SCHHHHHHHHHHHHHTTCEEEETCCEEEEEESS-SBEEEEEESS-------------
T ss_pred -----------------------cCHHHHHHHHHHHHhCCCEEEECCEEEEEEecC-CcEEEEEeCC-------------
Confidence 003456667888888999999999999998764 6777898877
Q ss_pred cCceEEEcCEEEEecCCCCchhHHHHHHcCCC
Q 006778 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~ 298 (631)
|.++.||.||.|+|..+.. .+.+..++.
T Consensus 235 --G~~i~aD~Vv~a~G~~p~~--~l~~~~gl~ 262 (415)
T 3lxd_A 235 --GSVIPADIVIVGIGIVPCV--GALISAGAS 262 (415)
T ss_dssp --SCEEECSEEEECSCCEESC--HHHHHTTCC
T ss_pred --CCEEEcCEEEECCCCccCh--HHHHhCCCC
Confidence 7789999999999998753 456666766
No 152
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.69 E-value=5e-08 Score=107.10 Aligned_cols=54 Identities=28% Similarity=0.418 Sum_probs=45.5
Q ss_pred CccccEEEECCCHHHHHHHHHHHh-hcccCCCCCeEEEEe--------eCCCCCCccccccccChHhHH
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQ-LCREKNVDLSVCVVE--------KGAEVGAHIISGNVFEPRALN 164 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~-~~~~~~~G~~V~vlE--------k~~~~g~~~~~g~~i~~~~l~ 164 (631)
.+++||+|||||+||+++|+.|++ . |++|+||| +...+|+.+...+|++.+.+.
T Consensus 5 ~~~~dvvVIGgG~aGl~aA~~la~~~------G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~ 67 (495)
T 2wpf_A 5 SKAFDLVVIGAGSGGLEAGWNAATLY------GKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMV 67 (495)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHH------CCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHH
T ss_pred ccccCEEEECCChhHHHHHHHHHHhc------CCeEEEEecccccccccCCCCCCeeecCCcchHHHHH
Confidence 346999999999999999999999 9 99999999 345688888777787766553
No 153
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.69 E-value=2.6e-08 Score=110.97 Aligned_cols=52 Identities=15% Similarity=0.355 Sum_probs=40.4
Q ss_pred hcCcEEecCceEEEEEEcC-CCcEEEEEeCCCccccCCCccccccCceEEEc-CEEEEecCCCCc
Q 006778 224 ELGVEIYPGFAASEILYDA-DNKVIGIGTNDMGIAKDGSKKENFQRGVELRG-RITLLAEGCRGS 286 (631)
Q Consensus 224 ~~Gv~i~~g~~v~~i~~~~-~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a-~~vV~A~G~~s~ 286 (631)
+.+++|+.++.|++|++++ +++++||.+.+ .+|.. .+++| +-||+|+|+..+
T Consensus 218 r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~----~~g~~-------~~v~A~keVILsaGa~~s 271 (577)
T 3q9t_A 218 KPNITIVPEVHSKRLIINEADRTCKGVTVVT----AAGNE-------LNFFADREVILSQGVFET 271 (577)
T ss_dssp CTTEEEECSEEEEEEEEETTTTEEEEEEEEE----TTSCE-------EEEEEEEEEEECSHHHHH
T ss_pred CCCeEEEcCcEEEEEEEeCCCCEEEEEEEEe----CCCcE-------EEEEeeeEEEEcccccCC
Confidence 4589999999999999984 46788998764 23432 57888 579999998753
No 154
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.65 E-value=3.9e-08 Score=104.34 Aligned_cols=108 Identities=20% Similarity=0.222 Sum_probs=73.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
...|||||||+||+++|..|++. +.+|+|||+.+..+.. ...+...+.... ..+
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~------~~~itlie~~~~~~y~--------~~~l~~~l~g~~----------~~~-- 62 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGK------CDDITMINSEKYLPYY--------RPRLNEIIAKNK----------SID-- 62 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTT------CSCEEEECSSSSCCBC--------GGGHHHHHHSCC----------CGG--
T ss_pred CCCEEEEcCcHHHHHHHHHHhCC------CCEEEEEECCCCCCcc--------cChhhHHHcCCC----------CHH--
Confidence 46899999999999999999665 9999999998875531 111211111100 000
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
++...+.+.+++.|++++++++|+++..++ . .|.+.+
T Consensus 63 --------------------------~l~~~~~~~~~~~~i~~~~~~~V~~id~~~-~---~v~~~~------------- 99 (385)
T 3klj_A 63 --------------------------DILIKKNDWYEKNNIKVITSEFATSIDPNN-K---LVTLKS------------- 99 (385)
T ss_dssp --------------------------GTBSSCHHHHHHTTCEEECSCCEEEEETTT-T---EEEETT-------------
T ss_pred --------------------------HccCCCHHHHHHCCCEEEeCCEEEEEECCC-C---EEEECC-------------
Confidence 000012233456799999999999997654 2 366665
Q ss_pred cCceEEEcCEEEEecCCCC
Q 006778 267 QRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s 285 (631)
|.++.+|.+|+|+|+++
T Consensus 100 --g~~~~yd~lvlAtG~~p 116 (385)
T 3klj_A 100 --GEKIKYEKLIIASGSIA 116 (385)
T ss_dssp --SCEEECSEEEECCCEEE
T ss_pred --CCEEECCEEEEecCCCc
Confidence 67899999999999754
No 155
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.65 E-value=4.7e-08 Score=105.91 Aligned_cols=39 Identities=44% Similarity=0.552 Sum_probs=34.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g 149 (631)
.+||||||||+||+++|..|++. ++|.+|+|||+.+.++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~----~~~~~V~vie~~~~~~ 41 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL----KPEWDVKVFEATEWVS 41 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSSSCCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHh----CcCCCEEEEECCCccc
Confidence 47999999999999999999987 4578999999988654
No 156
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.62 E-value=2.7e-08 Score=106.71 Aligned_cols=110 Identities=25% Similarity=0.279 Sum_probs=72.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCe--EEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLS--VCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSS 183 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~--V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~ 183 (631)
+.+||||||||+||+++|..|++. |.+ |+|+|+.+..+.... .+ ...+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~------g~~~~V~lie~~~~~~y~~~--------~l---~~~~------------- 57 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQN------GFEGRVLVIGREPEIPYERP--------PL---SKEY------------- 57 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCSCEEEEESSSSCCBCSG--------GG---GTTT-------------
T ss_pred CCCcEEEECChHHHHHHHHHHHcc------CcCCCEEEEecCCCCCcCcc--------cC---CHHH-------------
Confidence 468999999999999999999998 776 999999876543110 00 0000
Q ss_pred cceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcc
Q 006778 184 DKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (631)
Q Consensus 184 ~~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~ 263 (631)
+..... + ..+.....+..++.|++++.+++|+.+..+. + .|.+.+
T Consensus 58 -----~~~~~~---~-------------~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~--~--~v~~~~---------- 102 (415)
T 3lxd_A 58 -----LAREKT---F-------------ERICIRPAQFWEDKAVEMKLGAEVVSLDPAA--H--TVKLGD---------- 102 (415)
T ss_dssp -----TTTSSC---S-------------GGGBSSCHHHHHHTTEEEEETCCEEEEETTT--T--EEEETT----------
T ss_pred -----HcCCCC---H-------------HHhccCCHHHHHHCCcEEEeCCEEEEEECCC--C--EEEECC----------
Confidence 000000 0 0000011233456799999999999886554 2 356665
Q ss_pred ccccCceEEEcCEEEEecCCCC
Q 006778 264 ENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 264 ~~f~~g~~i~a~~vV~A~G~~s 285 (631)
|.++.+|.+|+|+|+.+
T Consensus 103 -----g~~~~~d~lvlAtG~~~ 119 (415)
T 3lxd_A 103 -----GSAIEYGKLIWATGGDP 119 (415)
T ss_dssp -----SCEEEEEEEEECCCEEC
T ss_pred -----CCEEEeeEEEEccCCcc
Confidence 67899999999999754
No 157
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.62 E-value=4.2e-07 Score=97.97 Aligned_cols=58 Identities=14% Similarity=0.193 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCc
Q 006778 212 SQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 212 ~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
..+.+.|.+.+++.|++|+++++|++|..++ +++++|.+ + |.+++||.||.|+|.++.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~-~~v~~v~~-~---------------g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMEN-GKVVGVKS-E---------------GEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEET-TEEEEEEE-T---------------TEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeC-CEEEEEEE-C---------------CeEEECCEEEECCCCCcc
Confidence 5788889999999999999999999998875 66767765 3 578999999999998863
No 158
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.62 E-value=2.8e-07 Score=101.66 Aligned_cols=41 Identities=39% Similarity=0.513 Sum_probs=38.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCC-CeEEEEeeCCCCCCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVD-LSVCVVEKGAEVGAHI 152 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G-~~V~vlEk~~~~g~~~ 152 (631)
+.+||+|||||++||+||..|++. | .+|+|+|+++.+||.+
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~------G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQN------GIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHT------TCCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc------CCCCEEEEeCCCCCCCce
Confidence 458999999999999999999999 9 9999999999999865
No 159
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.61 E-value=4.5e-08 Score=107.36 Aligned_cols=114 Identities=20% Similarity=0.242 Sum_probs=72.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCC---CeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeecc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVD---LSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVS 182 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G---~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~ 182 (631)
|.+||||||||+||+++|..|++. | .+|+|||+.+.++.. .+ .+ +.+.... .
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~------g~~~~~V~lie~~~~~~~~-~~-------~~----~~~~~~~--~----- 88 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTN------YGDANEIVVFDQNSNISFL-GA-------GM----ALWIGEQ--I----- 88 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH------HGGGSEEEEECSSSCCSBC-GG-------GH----HHHHTTS--S-----
T ss_pred cCCcEEEECCCHHHHHHHHHHHhc------CCCCCeEEEEECCCCCCcc-cc-------cc----chhhcCc--c-----
Confidence 468999999999999999999998 6 999999998765431 11 11 1111000 0
Q ss_pred CcceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCc
Q 006778 183 SDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSK 262 (631)
Q Consensus 183 ~~~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~ 262 (631)
.....+.. .+.+.+++.|++++.+++|+.+..++ +.+ .|.. + |+
T Consensus 89 -------~~~~~~~~-------------------~~~~~~~~~gv~v~~~~~v~~i~~~~-~~v-~v~~-~------g~- 132 (490)
T 2bc0_A 89 -------AGPEGLFY-------------------SDKEELESLGAKVYMESPVQSIDYDA-KTV-TALV-D------GK- 132 (490)
T ss_dssp -------SCSGGGBS-------------------CCHHHHHHTTCEEETTCCEEEEETTT-TEE-EEEE-T------TE-
T ss_pred -------CCHHHhhh-------------------cCHHHHHhCCCEEEeCCEEEEEECCC-CEE-EEEe-C------Cc-
Confidence 00000000 01233456799999999999886554 333 3331 2 11
Q ss_pred cccccCceEEEcCEEEEecCCCCc
Q 006778 263 KENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 263 ~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
+.++.+|.+|+|+|.++.
T Consensus 133 ------~~~~~~d~lviAtG~~p~ 150 (490)
T 2bc0_A 133 ------NHVETYDKLIFATGSQPI 150 (490)
T ss_dssp ------EEEEECSEEEECCCEEEC
T ss_pred ------EEEEECCEEEECCCCCcC
Confidence 367999999999997653
No 160
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.61 E-value=6.9e-08 Score=108.36 Aligned_cols=118 Identities=17% Similarity=0.186 Sum_probs=75.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
+..||||||||+|||++|..|++. ++|.+|+|||+.+.++... ..+...+.....
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~----~~g~~V~vie~~~~~~~~~--------~~lp~~~~g~~~------------- 89 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRL----SEEDEIIMVERGEYISFAN--------CGLPYYIGGVIT------------- 89 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH----CSSSEEEEECSSSCSSBCG--------GGHHHHHTTSSC-------------
T ss_pred cCCCEEEECCcHHHHHHHHHHHhh----CcCCCEEEEECCCCccccC--------CCCchhhcCcCC-------------
Confidence 357999999999999999999987 4589999999998765311 111111100000
Q ss_pred eEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccc
Q 006778 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (631)
Q Consensus 186 ~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (631)
+ ....+.+.+...+++.|++++++++|+++..++ +.+ .+...+ +|+
T Consensus 90 ------------~-----------~~~~~~~~~~~~~~~~gi~v~~~~~V~~id~~~-~~v-~v~~~~-----~g~---- 135 (588)
T 3ics_A 90 ------------E-----------RQKLLVQTVERMSKRFNLDIRVLSEVVKINKEE-KTI-TIKNVT-----TNE---- 135 (588)
T ss_dssp ------------C-----------GGGGBSSCHHHHHHHTTCEEECSEEEEEEETTT-TEE-EEEETT-----TCC----
T ss_pred ------------C-----------hHHhhccCHHHHHHhcCcEEEECCEEEEEECCC-CEE-EEeecC-----CCC----
Confidence 0 000011224455567899999999999997655 333 343211 121
Q ss_pred ccCceEEEcCEEEEecCCCC
Q 006778 266 FQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s 285 (631)
..++.+|.+|+|+|..+
T Consensus 136 ---~~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 136 ---TYNEAYDVLILSPGAKP 152 (588)
T ss_dssp ---EEEEECSEEEECCCEEE
T ss_pred ---EEEEeCCEEEECCCCCC
Confidence 14789999999999754
No 161
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.61 E-value=2.4e-07 Score=100.18 Aligned_cols=41 Identities=49% Similarity=0.752 Sum_probs=38.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~ 152 (631)
.++||+|||||++||+||+.|++. |++|+|+|+++.+|+.+
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~------g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA------GLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCcEEEEECCCCCCCce
Confidence 358999999999999999999999 99999999999998865
No 162
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.59 E-value=2.5e-07 Score=104.18 Aligned_cols=41 Identities=34% Similarity=0.502 Sum_probs=35.8
Q ss_pred cCccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCC
Q 006778 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGA 150 (631)
Q Consensus 104 ~~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~ 150 (631)
+...+||||||||++|+++|+.|++. |++|+|||+.+..++
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~~------G~~V~liE~~~~~gg 83 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVGA------GYKVAMFDIGEIDSG 83 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCSS
T ss_pred ccccCCEEEECCcHHHHHHHHHHHhC------CCcEEEEeccCCCCC
Confidence 34579999999999999999999999 999999999987665
No 163
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.59 E-value=9.9e-08 Score=102.14 Aligned_cols=110 Identities=26% Similarity=0.382 Sum_probs=86.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
...|+|||+|..|+.+|..|++. |.+|+++|+.+.+... .+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtvv~~~~~~l~~----------~~----------------------- 183 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKL------GLSVTILEAGDELLVR----------VL----------------------- 183 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSHH----------HH-----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCeEEEEecCCccchh----------hc-----------------------
Confidence 35799999999999999999999 9999999998754310 00
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
...+.+.+.+.+++.||++++++.|+++..++ .+.+|.+.|
T Consensus 184 ------------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~~~v~~~d------------- 224 (410)
T 3ef6_A 184 ------------------------GRRIGAWLRGLLTELGVQVELGTGVVGFSGEG--QLEQVMASD------------- 224 (410)
T ss_dssp ------------------------CHHHHHHHHHHHHHHTCEEECSCCEEEEECSS--SCCEEEETT-------------
T ss_pred ------------------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEeccC--cEEEEEECC-------------
Confidence 02445667788888999999999999987643 455688876
Q ss_pred cCceEEEcCEEEEecCCCCchhHHHHHHcCCC
Q 006778 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~ 298 (631)
|.++.+|.||.|+|.++.. .+.+..++.
T Consensus 225 --g~~i~aD~Vv~a~G~~p~~--~l~~~~gl~ 252 (410)
T 3ef6_A 225 --GRSFVADSALICVGAEPAD--QLARQAGLA 252 (410)
T ss_dssp --SCEEECSEEEECSCEEECC--HHHHHTTCC
T ss_pred --CCEEEcCEEEEeeCCeecH--HHHHhCCCc
Confidence 7789999999999998753 456677776
No 164
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.57 E-value=6.3e-08 Score=104.55 Aligned_cols=106 Identities=22% Similarity=0.258 Sum_probs=72.0
Q ss_pred ccEEEECCCHHHHHHHHHHHh---hcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCc
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQ---LCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~---~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (631)
.||||||||+||+++|..|++ . |++|+|||+.+..... + .+..+...+
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~------g~~Vtlie~~~~~~~~--------~-~~~~~~~g~-------------- 55 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS------GHEVTLISANDYFQFV--------P-SNPWVGVGW-------------- 55 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG------GSEEEEECSSSEEECG--------G-GHHHHHHTS--------------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC------cCEEEEEeCCCCCccc--------C-CccccccCc--------------
Confidence 589999999999999999999 6 9999999998743211 0 011110000
Q ss_pred ceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccc
Q 006778 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (631)
Q Consensus 185 ~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~ 264 (631)
....++...+.+.+++.|++++. .+|+.+..++ . .|.+.+
T Consensus 56 ------------------------~~~~~~~~~l~~~~~~~gv~~~~-~~v~~id~~~-~---~V~~~~----------- 95 (437)
T 3sx6_A 56 ------------------------KERDDIAFPIRHYVERKGIHFIA-QSAEQIDAEA-Q---NITLAD----------- 95 (437)
T ss_dssp ------------------------SCHHHHEEECHHHHHTTTCEEEC-SCEEEEETTT-T---EEEETT-----------
T ss_pred ------------------------cCHHHHHHHHHHHHHHCCCEEEE-eEEEEEEcCC-C---EEEECC-----------
Confidence 01122222345566678999985 5888886554 2 366665
Q ss_pred cccCceEEEcCEEEEecCCCCc
Q 006778 265 NFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 265 ~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.||+|+|+.+.
T Consensus 96 ----g~~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 96 ----GNTVHYDYLMIATGPKLA 113 (437)
T ss_dssp ----SCEEECSEEEECCCCEEC
T ss_pred ----CCEEECCEEEECCCCCcC
Confidence 678999999999998764
No 165
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.56 E-value=8.4e-08 Score=102.63 Aligned_cols=107 Identities=22% Similarity=0.252 Sum_probs=70.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCC--eEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSS 183 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~--~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~ 183 (631)
+.+||+|||||+||+++|..|++. |. +|+|+|+.+.++... ..+ ++. ++. . .. .
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~------g~~~~V~lie~~~~~~~~~---~~~-~~~---~~~---~-~~-------~ 61 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQA------GYQGLITVVGDEAERPYDR---PPL-SKD---FMA---H-GD-------A 61 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHH------TCCSCEEEEESSCSCCBCS---GGG-GTH---HHH---H-CC-------G
T ss_pred CCCcEEEECChHHHHHHHHHHHcc------CCCCeEEEEECCCCCcccC---CCC-CHH---HhC---C-Cc-------h
Confidence 468999999999999999999998 77 599999987543210 000 000 000 0 00 0
Q ss_pred cceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcc
Q 006778 184 DKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKK 263 (631)
Q Consensus 184 ~~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~ 263 (631)
+ . + .+. .+++.|++++.+++|+.+..+. . .|.+.+
T Consensus 62 ~-------~--~------------~~~----------~~~~~~v~~~~~~~v~~i~~~~--~--~v~~~~---------- 96 (408)
T 2gqw_A 62 E-------K--I------------RLD----------CKRAPEVEWLLGVTAQSFDPQA--H--TVALSD---------- 96 (408)
T ss_dssp G-------G--S------------BCC----------CTTSCSCEEEETCCEEEEETTT--T--EEEETT----------
T ss_pred h-------h--h------------hHH----------HHHHCCCEEEcCCEEEEEECCC--C--EEEECC----------
Confidence 0 0 0 000 2245789999999998886543 2 356655
Q ss_pred ccccCceEEEcCEEEEecCCCCc
Q 006778 264 ENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 264 ~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.+|+|+|+++.
T Consensus 97 -----g~~~~~d~lviAtG~~~~ 114 (408)
T 2gqw_A 97 -----GRTLPYGTLVLATGAAPR 114 (408)
T ss_dssp -----SCEEECSEEEECCCEEEC
T ss_pred -----CCEEECCEEEECCCCCCC
Confidence 568999999999998653
No 166
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.55 E-value=1.1e-07 Score=103.78 Aligned_cols=39 Identities=28% Similarity=0.492 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g 149 (631)
..||+|||||+|||++|..|++. .+|.+|+|||+.+.++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~----~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRL----DPEAHVTMIDQASRIS 41 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHH----CTTSEEEEECCC----
T ss_pred CCcEEEECCCHHHHHHHHHHHhh----CcCCCEEEEECCCccc
Confidence 36899999999999999999987 4589999999998754
No 167
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.54 E-value=4.2e-08 Score=105.68 Aligned_cols=109 Identities=23% Similarity=0.330 Sum_probs=70.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
..||||||||+||+++|..|++. .+|++|+|||+.+..+... .+......+.. .+.+
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~----~~g~~Vtlie~~~~~~~~~---------~~~~~~~g~~~----------~~~~ 58 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNL----MPDLKITLISDRPYFGFTP---------AFPHLAMGWRK----------FEDI 58 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHH----CTTCEEEEECSSSEEECGG---------GHHHHHHTCSC----------GGGS
T ss_pred CCCEEEECccHHHHHHHHHHHcC----CCCCeEEEECCCCCCCcCC---------CcchhccCccC----------HHHH
Confidence 46899999999999999999993 1289999999987654311 11111111000 0000
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
...+.+.+++.|++++.+ +|+.+..+. . .|.+.+
T Consensus 59 ----------------------------~~~~~~~~~~~gv~~~~~-~v~~id~~~--~--~v~~~~------------- 92 (430)
T 3h28_A 59 ----------------------------SVPLAPLLPKFNIEFINE-KAESIDPDA--N--TVTTQS------------- 92 (430)
T ss_dssp ----------------------------EEESTTTGGGGTEEEECS-CEEEEETTT--T--EEEETT-------------
T ss_pred ----------------------------HHHHHHHHHhcCCEEEEE-EEEEEECCC--C--EEEECC-------------
Confidence 000223345579999865 788876543 2 356655
Q ss_pred cCceEEEcCEEEEecCCCCc
Q 006778 267 QRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.+|+|+|....
T Consensus 93 --g~~i~~d~liiAtG~~~~ 110 (430)
T 3h28_A 93 --GKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp --CCEEECSEEEECCCCEEE
T ss_pred --CcEEECCEEEEcCCcccc
Confidence 568999999999998753
No 168
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.54 E-value=6.7e-08 Score=101.86 Aligned_cols=34 Identities=41% Similarity=0.561 Sum_probs=31.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV 148 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~ 148 (631)
-||+|||||+||+++|..|++. | +|+|+|+.+..
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~------g-~V~lie~~~~~ 42 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQT------Y-EVTVIDKEPVP 42 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT------S-EEEEECSSSSC
T ss_pred CcEEEECCcHHHHHHHHHHhhc------C-CEEEEECCCCC
Confidence 5899999999999999999998 8 99999998754
No 169
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.52 E-value=5.7e-08 Score=104.68 Aligned_cols=107 Identities=23% Similarity=0.396 Sum_probs=68.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
..|||||||+||+++|..|++. .++++|+|||+.+..... + .+.++...... .+.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~----~~~~~VtlI~~~~~~~~~--------p-~l~~v~~g~~~----------~~~-- 57 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL----MPDLKITLISDRPYFGFT--------P-AFPHLAMGWRK----------FED-- 57 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH----CTTCEEEEECSSSEEECG--------G-GHHHHHHTCSC----------GGG--
T ss_pred CcEEEECCCHHHHHHHHHHhcc----CcCCeEEEEcCCCCCccC--------c-cHHHHhcCCCC----------HHH--
Confidence 4699999999999999999987 346899999998743211 0 11111110000 000
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccccc
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~ 267 (631)
+ ..+ +.+.+++.|++++.+ +|++|..+. + .|++.+
T Consensus 58 -------i------------~~~-------~~~~~~~~gv~~i~~-~v~~Id~~~--~--~V~~~~-------------- 92 (430)
T 3hyw_A 58 -------I------------SVP-------LAPLLPKFNIEFINE-KAESIDPDA--N--TVTTQS-------------- 92 (430)
T ss_dssp -------S------------EEE-------STTTGGGGTEEEECS-CEEEEETTT--T--EEEETT--------------
T ss_pred -------h------------hhc-------HHHHHHHCCcEEEEe-EEEEEECCC--C--EEEECC--------------
Confidence 0 001 112234568999876 688886654 3 367776
Q ss_pred CceEEEcCEEEEecCCCC
Q 006778 268 RGVELRGRITLLAEGCRG 285 (631)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s 285 (631)
|.++.+|++|+|+|+..
T Consensus 93 -g~~i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 93 -GKKIEYDYLVIATGPKL 109 (430)
T ss_dssp -CCEEECSEEEECCCCEE
T ss_pred -CCEEECCEEEEeCCCCc
Confidence 78899999999999753
No 170
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.51 E-value=5.9e-08 Score=103.90 Aligned_cols=107 Identities=17% Similarity=0.290 Sum_probs=70.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCe--EEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLS--VCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~--V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
.||||||||+||+++|..|++. |.+ |+|+|+.+..+.... .+... ++.. . ...+.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~------g~~~~V~li~~~~~~~y~~~---~l~~~----~~~g----~------~~~~~ 59 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAE------GFEGRISLIGDEPHLPYDRP---SLSKA----VLDG----S------LERPP 59 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEEECSSSSSBCSG---GGGTH----HHHT----S------SSSCC
T ss_pred CCEEEEcccHHHHHHHHHHHcc------CcCCeEEEEECCCCCCcCCc---cccHH----HhCC----C------CCHHH
Confidence 5899999999999999999998 776 999999876543110 00000 0000 0 00000
Q ss_pred eEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccc
Q 006778 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (631)
Q Consensus 186 ~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (631)
+ +. ..+..++.|++++.+++|+.+..+. + .|.+.+
T Consensus 60 ---------~-~~-------------------~~~~~~~~~i~~~~~~~v~~id~~~--~--~v~~~~------------ 94 (410)
T 3ef6_A 60 ---------I-LA-------------------EADWYGEARIDMLTGPEVTALDVQT--R--TISLDD------------ 94 (410)
T ss_dssp ---------B-SS-------------------CTTHHHHTTCEEEESCCEEEEETTT--T--EEEETT------------
T ss_pred ---------h-cC-------------------CHHHHHHCCCEEEeCCEEEEEECCC--C--EEEECC------------
Confidence 0 00 0122345799999999999986554 2 366665
Q ss_pred ccCceEEEcCEEEEecCCCC
Q 006778 266 FQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s 285 (631)
|.++.+|.+|+|+|+++
T Consensus 95 ---g~~~~~d~lvlAtG~~p 111 (410)
T 3ef6_A 95 ---GTTLSADAIVIATGSRA 111 (410)
T ss_dssp ---SCEEECSEEEECCCEEE
T ss_pred ---CCEEECCEEEEccCCcc
Confidence 67899999999999764
No 171
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.51 E-value=5.3e-07 Score=95.50 Aligned_cols=110 Identities=20% Similarity=0.168 Sum_probs=85.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
..+|+|||+|+.|+.+|..|++. |.+|+|+|+.+.+....
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~~~---------------------------------- 184 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSG------GYQLDVVAPCEQVMPGL---------------------------------- 184 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTTT----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCeEEEEecCcchhhcc----------------------------------
Confidence 45799999999999999999999 99999999987543200
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
....+.+.|.+.+++.|++++++++|+++..+++ . +.|.+.+
T Consensus 185 -----------------------~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~-~~v~~~~------------- 226 (384)
T 2v3a_A 185 -----------------------LHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGE-G-LEAHLSD------------- 226 (384)
T ss_dssp -----------------------SCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETT-E-EEEEETT-------------
T ss_pred -----------------------cCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCC-E-EEEEECC-------------
Confidence 0124466677888889999999999999987653 2 3577665
Q ss_pred cCceEEEcCEEEEecCCCCchhHHHHHHcCCC
Q 006778 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~ 298 (631)
|.++.+|.||+|+|.++... +.+..++.
T Consensus 227 --g~~i~~d~vv~a~G~~p~~~--l~~~~g~~ 254 (384)
T 2v3a_A 227 --GEVIPCDLVVSAVGLRPRTE--LAFAAGLA 254 (384)
T ss_dssp --SCEEEESEEEECSCEEECCH--HHHHTTCC
T ss_pred --CCEEECCEEEECcCCCcCHH--HHHHCCCC
Confidence 67899999999999887642 55556655
No 172
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.50 E-value=1.6e-07 Score=99.54 Aligned_cols=109 Identities=24% Similarity=0.232 Sum_probs=68.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCC--CeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVD--LSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSS 183 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G--~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~ 183 (631)
+.+||||||||+||+++|..|++. | .+|+|+|+.. |.. ..+.+ +..+.
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~------g~~~~V~lie~~~--g~~-------~~~~~---l~~~~------------ 52 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKL------DGETPLLMITADD--GRS-------YSKPM---LSTGF------------ 52 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTT------CSSSCEEEECSSC--CCE-------ECGGG---GGGTT------------
T ss_pred CCCcEEEECChHHHHHHHHHHHhh------CCCCCEEEEECCC--CCc-------cCccc---ccHHH------------
Confidence 358999999999999999999998 6 6799999875 210 00000 00000
Q ss_pred cceEeeccCCcccCCCCCCCCCcEEEeHHHHHH-HHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCc
Q 006778 184 DKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVR-WLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSK 262 (631)
Q Consensus 184 ~~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~-~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~ 262 (631)
+. . .....+.. .+.+.+++.|++++.+++|+.+..++ . .|.+.+
T Consensus 53 --------------~~------~--~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~-~---~v~~~~--------- 97 (384)
T 2v3a_A 53 --------------SK------N--KDADGLAMAEPGAMAEQLNARILTHTRVTGIDPGH-Q---RIWIGE--------- 97 (384)
T ss_dssp --------------TT------T--CCHHHHEEECHHHHHHHTTCEEECSCCCCEEEGGG-T---EEEETT---------
T ss_pred --------------hC------C--CCHHHhhccCHHHHHHhCCcEEEeCCEEEEEECCC-C---EEEECC---------
Confidence 00 0 00111111 13344456799999999998886543 2 244543
Q ss_pred cccccCceEEEcCEEEEecCCCCc
Q 006778 263 KENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 263 ~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
.++.+|.+|+|+|+++.
T Consensus 98 -------~~~~~d~lviAtG~~p~ 114 (384)
T 2v3a_A 98 -------EEVRYRDLVLAWGAEPI 114 (384)
T ss_dssp -------EEEECSEEEECCCEEEC
T ss_pred -------cEEECCEEEEeCCCCcC
Confidence 57999999999998653
No 173
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.50 E-value=4e-07 Score=104.04 Aligned_cols=44 Identities=34% Similarity=0.560 Sum_probs=39.3
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCcccc
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIIS 154 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~ 154 (631)
...+||||||||+|||++|+.|++. |++|+|||+.+.+|+....
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~------G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVR------GYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSSSSCTHHHH
T ss_pred cccceEEEECCCHHHHHHHHHHHHC------CCeEEEEecCCCCCCEeee
Confidence 3468999999999999999999999 9999999999988876543
No 174
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.50 E-value=6.1e-08 Score=103.61 Aligned_cols=110 Identities=18% Similarity=0.150 Sum_probs=69.7
Q ss_pred ccEEEECCCHHHHHHHHHHHh---hcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCc
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQ---LCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~---~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (631)
.||||||||++||++|+.|++ . |.+|+|||+.+..+.... +.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~------g~~V~vie~~~~~~~~~~----~~------------------------- 46 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGS------KADVKVINKSRFSYFRPA----LP------------------------- 46 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGG------GSEEEEEESSSEEEECCS----SC-------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCC------CCeEEEEeCCCCceeccc----hh-------------------------
Confidence 379999999999999999999 6 999999999874322100 00
Q ss_pred ceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccc
Q 006778 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (631)
Q Consensus 185 ~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~ 264 (631)
+... .......+ ...+.+.+++.|++++.+ +|+++..++ . . |.+.+ .+++
T Consensus 47 --~~~~---------~~~~~~~~-------~~~~~~~~~~~gv~~~~~-~v~~i~~~~-~-~--V~~~~----g~~~--- 96 (409)
T 3h8l_A 47 --HVAI---------GVRDVDEL-------KVDLSEALPEKGIQFQEG-TVEKIDAKS-S-M--VYYTK----PDGS--- 96 (409)
T ss_dssp --CCCS---------SCCCCCCE-------EEEHHHHTGGGTCEEEEC-EEEEEETTT-T-E--EEEEC----TTSC---
T ss_pred --hccc---------CCcCHHHH-------HHHHHHHHhhCCeEEEEe-eEEEEeCCC-C-E--EEEcc----CCcc---
Confidence 0000 00000011 112455556789999987 888886554 2 2 44433 1111
Q ss_pred cccCceEEEcCEEEEecCCCCc
Q 006778 265 NFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 265 ~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
..++.+|.||+|+|..+.
T Consensus 97 ----~~~~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 97 ----MAEEEYDYVIVGIGAHLA 114 (409)
T ss_dssp ----EEEEECSEEEECCCCEEC
T ss_pred ----cceeeCCEEEECCCCCcC
Confidence 256999999999998654
No 175
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.49 E-value=2.9e-07 Score=108.84 Aligned_cols=123 Identities=21% Similarity=0.269 Sum_probs=78.0
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
..+|||||||||||+++|+.|++. |++|+|||+.+.+|+.+.. + ++
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~------G~~V~lie~~~~~GG~~~~--~--~k------------------------ 172 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRS------GARVMLLDERAEAGGTLLD--T--AG------------------------ 172 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSSGGGGG--S--SC------------------------
T ss_pred cCCCEEEECCCHHHHHHHHHHHhC------CCcEEEEeCCCCCCceecc--C--Cc------------------------
Confidence 468999999999999999999999 9999999999888764321 0 00
Q ss_pred eEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhc-CcEEecCceEEEEEEcCCCcEEEEEeCC--Ccccc-CCC
Q 006778 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTND--MGIAK-DGS 261 (631)
Q Consensus 186 ~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~-Gv~i~~g~~v~~i~~~~~g~v~gV~~~d--~g~~~-~G~ 261 (631)
..+. + ....++...+.+++.+. +++++.++.|.++..+ +.+..+.... ..+.. ++.
T Consensus 173 -~~i~---------------~--~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i~~~--~~~~~v~~~~~~~~v~~~~~~ 232 (965)
T 2gag_A 173 -EQID---------------G--MDSSAWIEQVTSELAEAEETTHLQRTTVFGSYDA--NYLIAAQRRTVHLDGPSGPGV 232 (965)
T ss_dssp -CEET---------------T--EEHHHHHHHHHHHHHHSTTEEEESSEEEEEEETT--TEEEEEEECSTTCSSCCCTTC
T ss_pred -cccC---------------C--CCHHHHHHHHHHHHhhcCCcEEEeCCEEEeeecC--CceeeeEeecccccccccccC
Confidence 0000 0 01234445556666664 8999999999887532 3343332211 00000 000
Q ss_pred ccccccCceEEEcCEEEEecCCCC
Q 006778 262 KKENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 262 ~~~~f~~g~~i~a~~vV~A~G~~s 285 (631)
. -+.+.++.+|.||+|+|++.
T Consensus 233 ~---~~~~~~i~~d~lVlATGs~p 253 (965)
T 2gag_A 233 S---RERIWHIRAKQVVLATGAHE 253 (965)
T ss_dssp C---SEEEEEEEEEEEEECCCEEE
T ss_pred C---CCceEEEECCEEEECCCCcc
Confidence 0 01135799999999999864
No 176
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.49 E-value=2.2e-07 Score=104.45 Aligned_cols=53 Identities=17% Similarity=0.409 Sum_probs=41.2
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeC-C-------CCCCccccccccChHhH
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKG-A-------EVGAHIISGNVFEPRAL 163 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~-~-------~~g~~~~~g~~i~~~~l 163 (631)
...+||+||||||||+++|+.|++. |++|+|+|+. + .+|+.+...++++...+
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~------g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l 165 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKY------GAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLM 165 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHT------TCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHH
T ss_pred cccccEEEECCCccHHHHHHHHHhC------CCeEEEEeccCCcccccccccCceEeccCCCchHHH
Confidence 3469999999999999999999999 9999999973 2 25655555555554443
No 177
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.47 E-value=2.2e-07 Score=100.69 Aligned_cols=118 Identities=11% Similarity=0.100 Sum_probs=72.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
+||||||||++|+++|..|++. .+|.+|+|||+.+.++... ..+.. +... ... ....+
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~----~~g~~V~lie~~~~~~~~~--------~~~~~----~~~g--~~~-~~~~~--- 58 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIAD----HPDADVTAYEMNDNISFLS--------CGIAL----YLGK--EIK-NNDPR--- 58 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CTTCEEEEEESSSCCCBCG--------GGHHH----HHTT--CBG-GGCGG---
T ss_pred CeEEEECCCHHHHHHHHHHHhh----CcCCcEEEEECCCCCCccc--------ccchh----hhcC--Ccc-cCCHH---
Confidence 5899999999999999999986 3589999999987654311 01110 1000 000 00000
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccccc
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~ 267 (631)
.+ ...+.+.+++.|++++.+++|..+..++ +.+ .+... .+|+
T Consensus 59 ------~~-------------------~~~~~~~~~~~gv~~~~~~~v~~i~~~~-~~v-~v~~~-----~~g~------ 100 (452)
T 2cdu_A 59 ------GL-------------------FYSSPEELSNLGANVQMRHQVTNVDPET-KTI-KVKDL-----ITNE------ 100 (452)
T ss_dssp ------GG-------------------BSCCHHHHHHTTCEEEESEEEEEEEGGG-TEE-EEEET-----TTCC------
T ss_pred ------Hh-------------------hhcCHHHHHHcCCEEEeCCEEEEEEcCC-CEE-EEEec-----CCCc------
Confidence 00 0011233456799999999998887655 333 33321 1121
Q ss_pred CceEEEcCEEEEecCCCCc
Q 006778 268 RGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s~ 286 (631)
+.++.+|.+|+|+|.++.
T Consensus 101 -~~~~~~d~lviAtGs~p~ 118 (452)
T 2cdu_A 101 -EKTEAYDKLIMTTGSKPT 118 (452)
T ss_dssp -EEEEECSEEEECCCEEEC
T ss_pred -eEEEECCEEEEccCCCcC
Confidence 467999999999997653
No 178
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.47 E-value=2.8e-07 Score=100.67 Aligned_cols=38 Identities=32% Similarity=0.516 Sum_probs=33.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g 149 (631)
+||||||||+||+++|+.|++. .+|.+|+|||+.+..+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~----~~g~~V~lie~~~~~~ 74 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRN----DENANVVTLEKGEIYS 74 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CTTCEEEEECSSSCCS
T ss_pred ceEEEECCCHHHHHHHHHHHhh----CcCCcEEEEECCCCCC
Confidence 5999999999999999999985 2489999999987654
No 179
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.47 E-value=8.3e-07 Score=95.58 Aligned_cols=112 Identities=20% Similarity=0.287 Sum_probs=86.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||||+.|+.+|..|++. |.+|+++|+.+.+....
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~------G~~Vtlv~~~~~~l~~~---------------------------------- 188 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKA------NMHVTLLDTAARVLERV---------------------------------- 188 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSTTTTT----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCEEEEEEeCCccccch----------------------------------
Confidence 35799999999999999999999 99999999876542100
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEc-CCCcEEEEEeCCCccccCCCcccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYD-ADNKVIGIGTNDMGIAKDGSKKEN 265 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~-~~g~v~gV~~~d~g~~~~G~~~~~ 265 (631)
+ ...+.+.+.+.+++.||+++++++|+++..+ +++.+.+|.+.|
T Consensus 189 ----------~-------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~------------ 233 (431)
T 1q1r_A 189 ----------T-------------APPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCED------------ 233 (431)
T ss_dssp ----------S-------------CHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETT------------
T ss_pred ----------h-------------hHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCC------------
Confidence 0 0234556777788899999999999999862 335676788776
Q ss_pred ccCceEEEcCEEEEecCCCCchhHHHHHHcCCC
Q 006778 266 FQRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~ 298 (631)
|.++.+|.||.|+|.++.. .+.+..++.
T Consensus 234 ---G~~i~~D~Vv~a~G~~p~~--~l~~~~gl~ 261 (431)
T 1q1r_A 234 ---GTRLPADLVIAGIGLIPNC--ELASAAGLQ 261 (431)
T ss_dssp ---SCEEECSEEEECCCEEECC--HHHHHTTCC
T ss_pred ---CCEEEcCEEEECCCCCcCc--chhhccCCC
Confidence 6789999999999988753 366667766
No 180
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.46 E-value=2.4e-07 Score=103.39 Aligned_cols=116 Identities=20% Similarity=0.169 Sum_probs=72.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
.||+|||||+|||++|..|++. +++.+|+|||+.+..+... ..+...+....
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~----~~~~~V~lie~~~~~~~~~--------~~l~~~~~~~~---------------- 53 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL----SETAEIIMFERGEYVSFAN--------CGLPYHISGEI---------------- 53 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH----CSSSEEEEECSSSCSSBCG--------GGHHHHHTSSS----------------
T ss_pred CcEEEECCCHHHHHHHHHHHhh----CcCCCEEEEECCCCccccc--------cCchHHhcCCc----------------
Confidence 4899999999999999999987 4579999999998765211 11111100000
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccccc
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~ 267 (631)
.. ....+.+.+...+++.|++++++++|+++..+. +.+ .+... .+|+
T Consensus 54 --~~------------------~~~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~-~~v-~~~~~-----~~g~------ 100 (565)
T 3ntd_A 54 --AQ------------------RSALVLQTPESFKARFNVEVRVKHEVVAIDRAA-KLV-TVRRL-----LDGS------ 100 (565)
T ss_dssp --CC------------------GGGGBCCCHHHHHHHHCCEEETTEEEEEEETTT-TEE-EEEET-----TTCC------
T ss_pred --CC------------------hHHhhccCHHHHHHhcCcEEEECCEEEEEECCC-CEE-EEEec-----CCCC------
Confidence 00 000011112333445799999999999997654 333 33321 1122
Q ss_pred CceEEEcCEEEEecCCCC
Q 006778 268 RGVELRGRITLLAEGCRG 285 (631)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s 285 (631)
..++.+|.||+|+|+++
T Consensus 101 -~~~~~~d~lviAtG~~p 117 (565)
T 3ntd_A 101 -EYQESYDTLLLSPGAAP 117 (565)
T ss_dssp -EEEEECSEEEECCCEEE
T ss_pred -eEEEECCEEEECCCCCC
Confidence 25799999999999854
No 181
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.45 E-value=1.7e-07 Score=101.42 Aligned_cols=38 Identities=26% Similarity=0.401 Sum_probs=33.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g 149 (631)
+||||||||+||+++|..|++. .+|.+|+|||+.+..+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~----~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNL----HPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH----CTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHh----CcCCeEEEEECCCccC
Confidence 3899999999999999999986 3489999999987654
No 182
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.44 E-value=1.5e-07 Score=102.13 Aligned_cols=39 Identities=36% Similarity=0.592 Sum_probs=36.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGA 150 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~ 150 (631)
..+||+|||||||||++|..|++. |++|+|||+.+.+|+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~------G~~V~v~e~~~~~GG 159 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK------GYEVHVYDRYDRMGG 159 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH------TCCEEEECSSSSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC------CCeEEEEeccCCCCC
Confidence 358999999999999999999999 999999999988776
No 183
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.43 E-value=1.3e-06 Score=100.38 Aligned_cols=39 Identities=41% Similarity=0.721 Sum_probs=36.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCc
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH 151 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~ 151 (631)
.+||+|||||++||++|+.|++. |++|+|+|+.+.+|+.
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~------g~~v~v~E~~~~~ggr 374 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNF------GIKVTVLEAKDRIGGR 374 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSSSSCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHC------CCcEEEEecccceece
Confidence 58999999999999999999999 9999999998888773
No 184
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.43 E-value=1.8e-07 Score=103.96 Aligned_cols=71 Identities=8% Similarity=0.172 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhcCcEEecCceEEEEEEc---CC-CcEEEEEeCCCccccCC-CccccccCceEEEc-CEEEEecCCCCch
Q 006778 214 LVRWLGGKAEELGVEIYPGFAASEILYD---AD-NKVIGIGTNDMGIAKDG-SKKENFQRGVELRG-RITLLAEGCRGSL 287 (631)
Q Consensus 214 l~~~L~~~a~~~Gv~i~~g~~v~~i~~~---~~-g~v~gV~~~d~g~~~~G-~~~~~f~~g~~i~a-~~vV~A~G~~s~~ 287 (631)
...+|.....+.+++|+.++.|++|+++ ++ ++++||++.+ .+| + ..+++| +-||+|.|+..
T Consensus 210 ~~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~----~~g~~-------~~~v~A~kEVILsAGai~-- 276 (566)
T 3fim_B 210 STAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAE----QEGAP-------TTTVCAKKEVVLSAGSVG-- 276 (566)
T ss_dssp HHHTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEES----STTSC-------CEEEEEEEEEEECCHHHH--
T ss_pred HHHHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEE----CCCce-------EEEEEeeeEEEEecCCcC--
Confidence 3344554445568999999999999997 22 5678888764 223 3 267889 78999999765
Q ss_pred hHHHHHHcCC
Q 006778 288 SEKLIKNFKL 297 (631)
Q Consensus 288 ~~~l~~~~g~ 297 (631)
..+|....|+
T Consensus 277 SPqlL~lSGI 286 (566)
T 3fim_B 277 TPILLQLSGI 286 (566)
T ss_dssp HHHHHHHTTE
T ss_pred ChHHHHhcCC
Confidence 3555545544
No 185
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.42 E-value=9e-07 Score=95.86 Aligned_cols=101 Identities=16% Similarity=0.141 Sum_probs=79.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||||+.|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~~--------------------------- 207 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGL------GAKTHLFEMFDAPLPS------FD--------------------------- 207 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT------SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhc------CCEEEEEEeCCchhhh------hh---------------------------
Confidence 35799999999999999999999 9999999998653210 00
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
..+.+.|.+.+++.|++++++++|+++..++++.+ .|.+.+
T Consensus 208 -------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~------------- 248 (450)
T 1ges_A 208 -------------------------PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSL-TLELED------------- 248 (450)
T ss_dssp -------------------------HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCE-EEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEE-EEEECC-------------
Confidence 13455677778888999999999999987654433 577765
Q ss_pred cCceEEEcCEEEEecCCCCch
Q 006778 267 QRGVELRGRITLLAEGCRGSL 287 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~ 287 (631)
|.++.+|.||+|+|.++..
T Consensus 249 --g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 249 --GRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp --SCEEEESEEEECSCEEESC
T ss_pred --CcEEEcCEEEECCCCCcCC
Confidence 6789999999999987753
No 186
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.41 E-value=8.1e-07 Score=96.33 Aligned_cols=100 Identities=20% Similarity=0.250 Sum_probs=78.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
..+|+|||||++|+.+|..|++. |.+|+|+|+.+.+... .
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~------g~~V~lv~~~~~~l~~------~---------------------------- 206 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRL------GAEVIVLEYMDRILPT------M---------------------------- 206 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT------S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCEEEEEecCCccccc------c----------------------------
Confidence 35799999999999999999999 9999999998754210 0
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
...+.+.|.+.+++.|++++++++|+++..+++ .+ .|.+.+
T Consensus 207 ------------------------~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~-~v-~v~~~~------------- 247 (455)
T 2yqu_A 207 ------------------------DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAK-GA-RVELEG------------- 247 (455)
T ss_dssp ------------------------CHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT-EE-EEEETT-------------
T ss_pred ------------------------CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC-EE-EEEECC-------------
Confidence 024456677777888999999999999987653 33 466554
Q ss_pred cCceEEEcCEEEEecCCCCch
Q 006778 267 QRGVELRGRITLLAEGCRGSL 287 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~ 287 (631)
|.++.+|.||+|+|.++..
T Consensus 248 --g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 248 --GEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp --SCEEEESEEEECSCEEECC
T ss_pred --CeEEEcCEEEECcCCCcCC
Confidence 5789999999999988753
No 187
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.40 E-value=2.4e-07 Score=98.82 Aligned_cols=107 Identities=18% Similarity=0.243 Sum_probs=69.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCC--eEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~--~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
.||||||||+||+++|..|++. |. +|+|||+.+....... .+ ...+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~------g~~~~V~lie~~~~~~y~~~--------~l---~~~~l~------------- 51 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQA------KYPGRIALINDEKHLPYQRP--------PL---SKAYLK------------- 51 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCSCEEEECCSSSSSBCSG--------GG---GTGGGG-------------
T ss_pred CCEEEEcChHHHHHHHHHHHhh------CcCCCEEEEeCCCCCCCCCc--------cC---CHHHHC-------------
Confidence 4899999999999999999998 77 8999999875443110 00 000000
Q ss_pred eEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccc
Q 006778 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (631)
Q Consensus 186 ~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (631)
.... +. .. .....+...+.|++++. .+|+.+..+. + .|.+.+
T Consensus 52 -----~~~~---~~------~~-------~~~~~~~~~~~~i~~~~-~~v~~id~~~--~--~v~~~~------------ 93 (404)
T 3fg2_P 52 -----SGGD---PN------SL-------MFRPEKFFQDQAIELIS-DRMVSIDREG--R--KLLLAS------------ 93 (404)
T ss_dssp -----SCCC---TT------SS-------BSSCHHHHHHTTEEEEC-CCEEEEETTT--T--EEEESS------------
T ss_pred -----CCCC---HH------Hc-------cCCCHHHHHhCCCEEEE-EEEEEEECCC--C--EEEECC------------
Confidence 0000 00 00 00012334557899998 8898886554 2 366665
Q ss_pred ccCceEEEcCEEEEecCCCC
Q 006778 266 FQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s 285 (631)
|.++.+|.+|+|+|..+
T Consensus 94 ---g~~~~~d~lvlAtG~~p 110 (404)
T 3fg2_P 94 ---GTAIEYGHLVLATGARN 110 (404)
T ss_dssp ---SCEEECSEEEECCCEEE
T ss_pred ---CCEEECCEEEEeeCCCc
Confidence 67899999999999754
No 188
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.40 E-value=3e-07 Score=100.83 Aligned_cols=114 Identities=24% Similarity=0.316 Sum_probs=75.4
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCc
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSD 184 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~ 184 (631)
...+||+|||||++|+++|+.|++. ++|+|||+.+.+|+...... .
T Consensus 106 ~~~~dVvIIGgG~aGl~aA~~L~~~-------~~V~vie~~~~~GG~~~~~~------------------~--------- 151 (493)
T 1y56_A 106 RVVVDVAIIGGGPAGIGAALELQQY-------LTVALIEERGWLGGDMWLKG------------------I--------- 151 (493)
T ss_dssp EEEESCCEECCSHHHHHHHHHHTTT-------CCEEEECTTSSSSCSGGGTC------------------S---------
T ss_pred cccCCEEEECccHHHHHHHHHHHhc-------CCEEEEeCCCCCCCeeeccc------------------c---------
Confidence 3468999999999999999999973 78999999988776422100 0
Q ss_pred ceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccc
Q 006778 185 KFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKE 264 (631)
Q Consensus 185 ~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~ 264 (631)
.. ..++ . ...++...+.+.+ +.|++++.++.|.++..+++ .+..+...+ |+
T Consensus 152 --~~------~g~~--------~--~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~-~~~~~~~~~------~~--- 202 (493)
T 1y56_A 152 --KQ------EGFN--------K--DSRKVVEELVGKL-NENTKIYLETSALGVFDKGE-YFLVPVVRG------DK--- 202 (493)
T ss_dssp --EE------TTTT--------E--EHHHHHHHHHHTC-CTTEEEETTEEECCCEECSS-SEEEEEEET------TE---
T ss_pred --cc------CCCC--------C--CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcCCc-EEEEEEecC------Ce---
Confidence 00 0000 1 2344555555555 56899999999988877653 332222122 10
Q ss_pred cccCceEEEcCEEEEecCCCC
Q 006778 265 NFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 265 ~f~~g~~i~a~~vV~A~G~~s 285 (631)
-.++.+|.+|+|+|+..
T Consensus 203 ----~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 203 ----LIEILAKRVVLATGAID 219 (493)
T ss_dssp ----EEEEEESCEEECCCEEE
T ss_pred ----EEEEECCEEEECCCCCc
Confidence 13789999999999765
No 189
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.38 E-value=1.2e-06 Score=95.62 Aligned_cols=101 Identities=18% Similarity=0.177 Sum_probs=79.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||||..|+.+|..|++. |.+|+++|+.+.+... ++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~d--------------------------- 225 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGL------GSETHLVIRGETVLRK------FD--------------------------- 225 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT------SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCceEEEEeCCccccc------cC---------------------------
Confidence 35799999999999999999999 9999999998754310 00
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
..+.+.|.+.+++.||+++++++|+++..++++.++.|.+.+
T Consensus 226 -------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~------------- 267 (479)
T 2hqm_A 226 -------------------------ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMND------------- 267 (479)
T ss_dssp -------------------------HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECC-------------
Confidence 133556777778889999999999999876555344677766
Q ss_pred cCc-eEEEcCEEEEecCCCCc
Q 006778 267 QRG-VELRGRITLLAEGCRGS 286 (631)
Q Consensus 267 ~~g-~~i~a~~vV~A~G~~s~ 286 (631)
| .++.+|.||+|+|..+.
T Consensus 268 --G~~~i~~D~vv~a~G~~p~ 286 (479)
T 2hqm_A 268 --SKSIDDVDELIWTIGRKSH 286 (479)
T ss_dssp --SCEEEEESEEEECSCEEEC
T ss_pred --CcEEEEcCEEEECCCCCCc
Confidence 6 68999999999997664
No 190
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.38 E-value=2.3e-06 Score=92.68 Aligned_cols=100 Identities=21% Similarity=0.188 Sum_probs=79.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
...|+|||+|..|+.+|..|++. |.+|+++|+.+.+....
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~---------------------------------- 186 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKM------KKTVHVFESLENLLPKY---------------------------------- 186 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTTT----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCeEEEEEccCcccccc----------------------------------
Confidence 35799999999999999999999 99999999987543200
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
+ -..+.+.+.+.+++.||+|+++++|+++..++ +.+ .|.+.+
T Consensus 187 ----------~-------------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v-~v~~~~------------- 228 (452)
T 3oc4_A 187 ----------F-------------DKEMVAEVQKSLEKQAVIFHFEETVLGIEETA-NGI-VLETSE------------- 228 (452)
T ss_dssp ----------C-------------CHHHHHHHHHHHHTTTEEEEETCCEEEEEECS-SCE-EEEESS-------------
T ss_pred ----------C-------------CHHHHHHHHHHHHHcCCEEEeCCEEEEEEccC-CeE-EEEECC-------------
Confidence 0 02446667888888999999999999998655 455 677755
Q ss_pred cCceEEEcCEEEEecCCCCch
Q 006778 267 QRGVELRGRITLLAEGCRGSL 287 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~ 287 (631)
| ++.+|.||+|+|..+..
T Consensus 229 --g-~i~aD~Vv~A~G~~p~~ 246 (452)
T 3oc4_A 229 --Q-EISCDSGIFALNLHPQL 246 (452)
T ss_dssp --C-EEEESEEEECSCCBCCC
T ss_pred --C-EEEeCEEEECcCCCCCh
Confidence 5 89999999999987753
No 191
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.37 E-value=2.4e-07 Score=101.65 Aligned_cols=41 Identities=20% Similarity=0.346 Sum_probs=34.9
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCC
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g 149 (631)
+..+||||||||+||+++|..|++. .+|.+|+|||+.+.++
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~----~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRAR----DPGARVLIVSEDPELP 49 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHH----STTCEEEEEESSSSCC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhc----CCCCeEEEEeCCCCCC
Confidence 3468999999999999999988775 3489999999987654
No 192
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.34 E-value=1.5e-06 Score=94.17 Aligned_cols=101 Identities=21% Similarity=0.273 Sum_probs=78.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
...|+|||||..|+.+|..|++. |.+|+++|+.+.+....
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~---------------------------------- 188 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQ------NYNVNLIDGHERVLYKY---------------------------------- 188 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTT------TCEEEEEESSSSTTTTT----------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhc------CCEEEEEEcCCchhhhh----------------------------------
Confidence 35799999999999999999999 99999999986542100
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
+ -..+.+.+.+.+++.||+++++++|+++..++ +.+..|.+ +
T Consensus 189 ----------~-------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~v~~v~~-~------------- 230 (452)
T 2cdu_A 189 ----------F-------------DKEFTDILAKDYEAHGVNLVLGSKVAAFEEVD-DEIITKTL-D------------- 230 (452)
T ss_dssp ----------S-------------CHHHHHHHHHHHHHTTCEEEESSCEEEEEEET-TEEEEEET-T-------------
T ss_pred ----------h-------------hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCC-CeEEEEEe-C-------------
Confidence 0 02345667788888999999999999998643 55655654 3
Q ss_pred cCceEEEcCEEEEecCCCCch
Q 006778 267 QRGVELRGRITLLAEGCRGSL 287 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~ 287 (631)
|.++.+|.||.|+|..+..
T Consensus 231 --g~~i~~D~vv~a~G~~p~~ 249 (452)
T 2cdu_A 231 --GKEIKSDIAILCIGFRPNT 249 (452)
T ss_dssp --SCEEEESEEEECCCEEECC
T ss_pred --CCEEECCEEEECcCCCCCH
Confidence 5689999999999987753
No 193
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.33 E-value=1.4e-06 Score=94.08 Aligned_cols=99 Identities=20% Similarity=0.222 Sum_probs=77.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
..+|+|||||++|+.+|..|++. |.+|+|+|+.+.+....
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~~---------------------------------- 188 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKA------GKKVTVIDILDRPLGVY---------------------------------- 188 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSTTTTT----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHC------CCeEEEEecCccccccc----------------------------------
Confidence 57899999999999999999999 99999999987543200
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
+ ...+.+.+.+.+++.|++++++++|+++..+ +.+..|.+.
T Consensus 189 ----------~-------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~~-------------- 229 (447)
T 1nhp_A 189 ----------L-------------DKEFTDVLTEEMEANNITIATGETVERYEGD--GRVQKVVTD-------------- 229 (447)
T ss_dssp ----------C-------------CHHHHHHHHHHHHTTTEEEEESCCEEEEECS--SBCCEEEES--------------
T ss_pred ----------C-------------CHHHHHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEEC--------------
Confidence 0 0245667788888899999999999998754 344345553
Q ss_pred cCceEEEcCEEEEecCCCCc
Q 006778 267 QRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (631)
+.++.+|.||+|+|.++.
T Consensus 230 --~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 230 --KNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp --SCEEECSEEEECSCEEES
T ss_pred --CCEEECCEEEECcCCCCC
Confidence 457999999999998764
No 194
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.32 E-value=2.1e-06 Score=93.67 Aligned_cols=107 Identities=21% Similarity=0.296 Sum_probs=79.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||||+.|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~~--------------------------- 223 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRL------GSKVTVVEFQPQIGAS------MD--------------------------- 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSSS------SC---------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHc------CCEEEEEEeCCccccc------cC---------------------------
Confidence 35799999999999999999999 9999999998754320 00
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
..+.+.+.+.+++.||+++++++|+++..++++..+.|.+.+ ..+|+
T Consensus 224 -------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~---~~~g~----- 270 (478)
T 1v59_A 224 -------------------------GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVED---TKTNK----- 270 (478)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEE---TTTTE-----
T ss_pred -------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEE---cCCCC-----
Confidence 244566778888899999999999999863123334565542 01111
Q ss_pred cCceEEEcCEEEEecCCCCch
Q 006778 267 QRGVELRGRITLLAEGCRGSL 287 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~ 287 (631)
+.++.+|.||+|+|..+..
T Consensus 271 --~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 271 --QENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp --EEEEEESEEEECSCEEECC
T ss_pred --ceEEECCEEEECCCCCcCC
Confidence 4789999999999987653
No 195
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.31 E-value=2.1e-06 Score=93.30 Aligned_cols=99 Identities=24% Similarity=0.237 Sum_probs=78.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
-.|+|||||..|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~------G~~Vtlv~~~~~~l~~------~~---------------------------- 206 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSF------GSEVTVVALEDRLLFQ------FD---------------------------- 206 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT------SC----------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhc------CCEEEEEEcCCccccc------cC----------------------------
Confidence 4799999999999999999999 9999999988654210 00
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccccc
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~ 267 (631)
..+.+.|.+.+++.||+++++++|+++..++++ ..|.+.+
T Consensus 207 ------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~-------------- 246 (463)
T 2r9z_A 207 ------------------------PLLSATLAENMHAQGIETHLEFAVAALERDAQG--TTLVAQD-------------- 246 (463)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEESSCCEEEEEEETTE--EEEEETT--------------
T ss_pred ------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEEeC--------------
Confidence 123455677778899999999999999876543 3577765
Q ss_pred Cce-EEEcCEEEEecCCCCch
Q 006778 268 RGV-ELRGRITLLAEGCRGSL 287 (631)
Q Consensus 268 ~g~-~i~a~~vV~A~G~~s~~ 287 (631)
|. ++.+|.||+|+|.++..
T Consensus 247 -G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 247 -GTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp -CCEEEEESEEEECSCEEESC
T ss_pred -CcEEEEcCEEEECCCCCcCC
Confidence 66 79999999999987653
No 196
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.31 E-value=3.4e-06 Score=90.07 Aligned_cols=106 Identities=18% Similarity=0.253 Sum_probs=82.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
...|+|||||..|+.+|..|++. |.+|+++|+.+.+....
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~---------------------------------- 184 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTA------GVHVSLVETQPRLMSRA---------------------------------- 184 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTTT----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCEEEEEEeCCcccccc----------------------------------
Confidence 35799999999999999999999 99999999987543200
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
+ -..+.+.+.+.+++.||+++++++|+++. + + .|.+.+
T Consensus 185 ----------~-------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~---~v~~~~------------- 222 (408)
T 2gqw_A 185 ----------A-------------PATLADFVARYHAAQGVDLRFERSVTGSV-D--G---VVLLDD------------- 222 (408)
T ss_dssp ----------S-------------CHHHHHHHHHHHHHTTCEEEESCCEEEEE-T--T---EEEETT-------------
T ss_pred ----------c-------------CHHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C---EEEECC-------------
Confidence 0 02345567777888999999999999997 3 3 466665
Q ss_pred cCceEEEcCEEEEecCCCCchhHHHHHHcCCC
Q 006778 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~ 298 (631)
|.++.+|.||.|+|..+.. .+.+..++.
T Consensus 223 --g~~i~~D~vi~a~G~~p~~--~l~~~~gl~ 250 (408)
T 2gqw_A 223 --GTRIAADMVVVGIGVLAND--ALARAAGLA 250 (408)
T ss_dssp --SCEEECSEEEECSCEEECC--HHHHHHTCC
T ss_pred --CCEEEcCEEEECcCCCccH--HHHHhCCCC
Confidence 6789999999999988753 355666765
No 197
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.30 E-value=3.7e-06 Score=92.26 Aligned_cols=100 Identities=17% Similarity=0.219 Sum_probs=79.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||||+.|+.+|..|++. |.+|+++|+.+.+... ++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~d--------------------------- 216 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRL------GIDSYIFARGNRILRK------FD--------------------------- 216 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSSSSCTT------SC---------------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHc------CCeEEEEecCCccCcc------cc---------------------------
Confidence 35799999999999999999999 9999999998754320 00
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
..+.+.+.+.+++.||+++++++|+++..++++.+ .|.+.+
T Consensus 217 -------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~-~v~~~~------------- 257 (500)
T 1onf_A 217 -------------------------ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNL-SIHLSD------------- 257 (500)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCE-EEEETT-------------
T ss_pred -------------------------hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceE-EEEECC-------------
Confidence 23455677788889999999999999987654433 566665
Q ss_pred cCceE-EEcCEEEEecCCCCc
Q 006778 267 QRGVE-LRGRITLLAEGCRGS 286 (631)
Q Consensus 267 ~~g~~-i~a~~vV~A~G~~s~ 286 (631)
|.+ +.+|.||.|+|..+.
T Consensus 258 --g~~~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 258 --GRIYEHFDHVIYCVGRSPD 276 (500)
T ss_dssp --SCEEEEESEEEECCCBCCT
T ss_pred --CcEEEECCEEEECCCCCcC
Confidence 556 999999999998875
No 198
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.28 E-value=1.1e-06 Score=97.36 Aligned_cols=63 Identities=24% Similarity=0.393 Sum_probs=45.2
Q ss_pred HhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcC-EEEEecCCCCchhHHHHHHcCC
Q 006778 223 EELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGR-ITLLAEGCRGSLSEKLIKNFKL 297 (631)
Q Consensus 223 ~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~-~vV~A~G~~s~~~~~l~~~~g~ 297 (631)
.+.|++|+.++.|++|+.+++++++||.+.+. .+|+ ..+++|+ .||+|+|+.. ..+|....|+
T Consensus 220 ~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~---~~g~-------~~~i~A~k~VIlaaG~~~--sp~lL~~SGi 283 (546)
T 2jbv_A 220 EQENFTLLTGLRARQLVFDADRRCTGVDIVDS---AFGH-------THRLTARNEVVLSTGAID--TPKLLMLSGI 283 (546)
T ss_dssp TCTTEEEECSCEEEEEEECTTSBEEEEEEESS---TTSC-------EEEEEEEEEEEECSHHHH--HHHHHHHTTE
T ss_pred cCCCcEEEeCCEEEEEEECCCCeEEEEEEEEC---CCCc-------EEEEEeCccEEEecCccC--CchhhhhcCC
Confidence 35689999999999999976577889987541 1133 2579998 9999999854 2445444443
No 199
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.27 E-value=9.6e-07 Score=95.26 Aligned_cols=115 Identities=15% Similarity=0.216 Sum_probs=68.7
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceEe
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFWF 188 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 188 (631)
.|||||||+||+++|..|+++ ++..+|+|||+.+...... .+ +..++.....
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~----g~~~~V~lie~~~~~~~~~---~~-----l~~~~~~~~~---------------- 53 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL----DKESDIIIFEKDRDMSFAN---CA-----LPYVIGEVVE---------------- 53 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH----CSSSCEEEEESSSCSSBCG---GG-----HHHHHTTSSC----------------
T ss_pred eEEEECCCHHHHHHHHHHHhC----CCCCcEEEEeCCCCCCCCc---ch-----hHHHHcCCcc----------------
Confidence 599999999999999999998 2236899999987543210 11 1111100000
Q ss_pred eccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccC
Q 006778 189 LTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQR 268 (631)
Q Consensus 189 l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~ 268 (631)
.....+. ... .+..++.|++++.+++|+.+..+. . ...+.... ++ .
T Consensus 54 ---~~~~~~~----------~~~-------~~~~~~~~i~~~~~~~V~~id~~~-~-~~~~~~~~-----~~-------~ 99 (437)
T 4eqs_A 54 ---DRRYALA----------YTP-------EKFYDRKQITVKTYHEVIAINDER-Q-TVSVLNRK-----TN-------E 99 (437)
T ss_dssp ---CGGGTBC----------CCH-------HHHHHHHCCEEEETEEEEEEETTT-T-EEEEEETT-----TT-------E
T ss_pred ---chhhhhh----------cCH-------HHHHHhcCCEEEeCCeEEEEEccC-c-EEEEEecc-----CC-------c
Confidence 0000000 001 122345789999999999886654 2 32333221 11 1
Q ss_pred ceEEEcCEEEEecCCCC
Q 006778 269 GVELRGRITLLAEGCRG 285 (631)
Q Consensus 269 g~~i~a~~vV~A~G~~s 285 (631)
+.++.+|.+|+|+|+++
T Consensus 100 ~~~~~yd~lVIATGs~p 116 (437)
T 4eqs_A 100 QFEESYDKLILSPGASA 116 (437)
T ss_dssp EEEEECSEEEECCCEEE
T ss_pred eEEEEcCEEEECCCCcc
Confidence 46799999999999865
No 200
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.24 E-value=3e-06 Score=90.06 Aligned_cols=35 Identities=31% Similarity=0.516 Sum_probs=30.8
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
.|||||||+||+++|..|++. +++.+|+|||+.+.
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~----~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLA----DPSIEVTLIEPNET 38 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSCSS
T ss_pred EEEEECCcHHHHHHHHHHHhc----CcCCeEEEEeCCCC
Confidence 699999999999999999887 34679999999864
No 201
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.24 E-value=4.7e-07 Score=98.27 Aligned_cols=38 Identities=29% Similarity=0.349 Sum_probs=34.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCC--CeEEEEeeCCCCCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVD--LSVCVVEKGAEVGA 150 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G--~~V~vlEk~~~~g~ 150 (631)
.+||+|||||+||+.+|..|++. | .+|+|||+.+.+++
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~------g~~~~V~vie~~~~~gg 45 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH------HSRAHVDIYEKQLVPFG 45 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------CSSCEEEEECSSSSSCT
T ss_pred CceEEEECcCHHHHHHHHHHHhc------CCCCCEEEEeCCCcCCc
Confidence 57999999999999999999998 6 99999999987764
No 202
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.24 E-value=3.7e-06 Score=91.04 Aligned_cols=102 Identities=19% Similarity=0.288 Sum_probs=77.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
..+|+|||||+.|+.+|..|++. |.+|+|+|+.+.+... +
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~---------------------------- 209 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANF------GTKVTILEGAGEILSG------F---------------------------- 209 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTT------S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCcEEEEEcCCccccc------c----------------------------
Confidence 45899999999999999999999 9999999998754210 0
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
...+.+.+.+.+++.||+++++++|+++..+++ .+ .|.+.+ +|
T Consensus 210 ------------------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~-~v~~~~-----~g------ 252 (455)
T 1ebd_A 210 ------------------------EKQMAAIIKKRLKKKGVEVVTNALAKGAEERED-GV-TVTYEA-----NG------ 252 (455)
T ss_dssp ------------------------CHHHHHHHHHHHHHTTCEEEESEEEEEEEEETT-EE-EEEEEE-----TT------
T ss_pred ------------------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC-eE-EEEEEe-----CC------
Confidence 023455677778889999999999999987653 33 344431 11
Q ss_pred cCceEEEcCEEEEecCCCCc
Q 006778 267 QRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (631)
++.++.+|.||+|+|.++.
T Consensus 253 -~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 253 -ETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp -EEEEEEESEEEECSCEEES
T ss_pred -ceeEEEcCEEEECcCCCcc
Confidence 1578999999999998764
No 203
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.23 E-value=9.9e-07 Score=100.46 Aligned_cols=40 Identities=33% Similarity=0.542 Sum_probs=36.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH 151 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~ 151 (631)
..+||+|||||+||+++|..|++. |++|+|||+.+.+|+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~------g~~V~lie~~~~~gg~ 411 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAAR------GHQVTLFDAHSEIGGQ 411 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT------TCEEEEEESSSSSCTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCCCCCCe
Confidence 358999999999999999999998 9999999999888763
No 204
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.22 E-value=1.8e-06 Score=95.33 Aligned_cols=68 Identities=18% Similarity=0.286 Sum_probs=46.3
Q ss_pred HHHHHHHHH-hcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCchhHHHHH
Q 006778 215 VRWLGGKAE-ELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIK 293 (631)
Q Consensus 215 ~~~L~~~a~-~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~ 293 (631)
..++...+. +.++.|+.++.|..++.++ +++++|...+ +++ ...+.|+.||+|.|+-. ..+|..
T Consensus 213 ~~~~~~~~~~r~nl~v~~~~~v~~i~~~~-~~a~gv~~~~----~~~--------~~~~~a~~VILsAGai~--SP~LLl 277 (526)
T 3t37_A 213 DAWLTKAVRGRKNLTILTGSRVRRLKLEG-NQVRSLEVVG----RQG--------SAEVFADQIVLCAGALE--SPALLM 277 (526)
T ss_dssp HHHSCHHHHTCTTEEEECSCEEEEEEEET-TEEEEEEEEE----TTE--------EEEEEEEEEEECSHHHH--HHHHHH
T ss_pred cccccccccCCCCeEEEeCCEEEEEEecC-CeEEEEEEEe----cCc--------eEEEeecceEEcccccC--Ccchhh
Confidence 333433333 3579999999999999887 6777887654 111 25788999999999765 345554
Q ss_pred HcCC
Q 006778 294 NFKL 297 (631)
Q Consensus 294 ~~g~ 297 (631)
..|+
T Consensus 278 ~SGi 281 (526)
T 3t37_A 278 RSGI 281 (526)
T ss_dssp HTTE
T ss_pred hccC
Confidence 4444
No 205
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.22 E-value=4.7e-06 Score=90.96 Aligned_cols=98 Identities=19% Similarity=0.357 Sum_probs=77.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
..+|+|||||+.|+.+|..|++. |.+|+|+|+.+.+... +
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~---------------------------- 225 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVEL------GKKVRMIERNDHIGTI------Y---------------------------- 225 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHT------TCEEEEECCGGGTTSS------S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhc------CCeEEEEEeCCchhhc------C----------------------------
Confidence 46899999999999999999999 9999999998654320 0
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
...+.+.|.+.+++.|++++++++|+++..+ +.+..|.+.+
T Consensus 226 ------------------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~~~------------- 266 (480)
T 3cgb_A 226 ------------------------DGDMAEYIYKEADKHHIEILTNENVKAFKGN--ERVEAVETDK------------- 266 (480)
T ss_dssp ------------------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SBEEEEEETT-------------
T ss_pred ------------------------CHHHHHHHHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEECC-------------
Confidence 0234566778888899999999999999764 4565566543
Q ss_pred cCceEEEcCEEEEecCCCCc
Q 006778 267 QRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (631)
.++.+|.||+|+|..+.
T Consensus 267 ---~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 267 ---GTYKADLVLVSVGVKPN 283 (480)
T ss_dssp ---EEEECSEEEECSCEEES
T ss_pred ---CEEEcCEEEECcCCCcC
Confidence 58999999999997653
No 206
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.21 E-value=7.2e-07 Score=106.22 Aligned_cols=54 Identities=13% Similarity=0.103 Sum_probs=41.9
Q ss_pred cCCCCcccccCCccccce-----EEEcCCCCeEEEEecCCccccccccccCCC-CCcceeCC
Q 006778 565 RDPKIPELVNLPEYAGPE-----YVPDEKNQLKLQINAQNCLHCKACDIKDPK-QNIKWTVP 620 (631)
Q Consensus 565 ~~~~~~~~~~~~~~~~p~-----~~~~~~~~~~~~~~~~~c~~c~tC~i~~p~-~~i~w~~p 620 (631)
.|++.|..|..-.-.||. +..++.. ....++ +.|+.||.|...||. +.|++..-
T Consensus 948 id~~~C~~Cg~C~~~CP~~~~~ai~~~~~~-~~~~~~-~~C~~Cg~C~~~CP~~~Ai~~~~~ 1007 (1025)
T 1gte_A 948 IDEEMCINCGKCYMTCNDSGYQAIQFDPET-HLPTVT-DTCTGCTLCLSVCPIIDCIRMVSR 1007 (1025)
T ss_dssp ECTTTCCCCCHHHHHHHHHSCSCEEECTTT-CCEEEC-TTCCCCCHHHHHCSSTTTEEEEEC
T ss_pred EEcccCcccCHHHHhcCccccCCEEEeCCC-ceEEeC-ccCCChhHHHhhCCCCCCEEEecC
Confidence 488999998777889993 5444332 246777 999999999999999 89987643
No 207
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.21 E-value=7.3e-06 Score=91.26 Aligned_cols=109 Identities=21% Similarity=0.329 Sum_probs=83.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
-.|+|||||..|+.+|..|++. |.+|+++|+.+.+... +
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~----------------------------- 190 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHL------GIKTTLLELADQVMTP------V----------------------------- 190 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSCTT------S-----------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhc------CCcEEEEEcCCccchh------c-----------------------------
Confidence 4799999999999999999999 9999999998754210 0
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEc------------------CCCcEEEE
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYD------------------ADNKVIGI 249 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~------------------~~g~v~gV 249 (631)
...+.+.+.+.+++.||++++++.++++..+ +++.+ .+
T Consensus 191 -----------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 246 (565)
T 3ntd_A 191 -----------------------DREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHL-SL 246 (565)
T ss_dssp -----------------------CHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEE-EE
T ss_pred -----------------------CHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcE-EE
Confidence 0234566777788899999999999999874 23443 35
Q ss_pred EeCCCccccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCC
Q 006778 250 GTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (631)
Q Consensus 250 ~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~ 298 (631)
.+.+ |.++.+|.||.|+|..+.. .+.+..|+.
T Consensus 247 ~~~~---------------g~~i~~D~vi~a~G~~p~~--~l~~~~g~~ 278 (565)
T 3ntd_A 247 TLSN---------------GELLETDLLIMAIGVRPET--QLARDAGLA 278 (565)
T ss_dssp EETT---------------SCEEEESEEEECSCEEECC--HHHHHHTCC
T ss_pred EEcC---------------CCEEEcCEEEECcCCccch--HHHHhCCcc
Confidence 5554 6789999999999998754 355566665
No 208
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.20 E-value=6e-06 Score=86.81 Aligned_cols=102 Identities=24% Similarity=0.367 Sum_probs=79.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
.+|+|||||+.|+.+|..|++. |.+|+++|+.+.+.. ++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~-------~~---------------------------- 182 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEA------GYHVKLIHRGAMFLG-------LD---------------------------- 182 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHT------TCEEEEECSSSCCTT-------CC----------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCCeecc-------CC----------------------------
Confidence 4799999999999999999999 999999999875321 00
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccccc
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~ 267 (631)
..+.+.+.+.+++.||+++++++++++. . . +|.+.+
T Consensus 183 ------------------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~-~---~v~~~~-------------- 218 (367)
T 1xhc_A 183 ------------------------EELSNMIKDMLEETGVKFFLNSELLEAN--E-E---GVLTNS-------------- 218 (367)
T ss_dssp ------------------------HHHHHHHHHHHHHTTEEEECSCCEEEEC--S-S---EEEETT--------------
T ss_pred ------------------------HHHHHHHHHHHHHCCCEEEcCCEEEEEE--e-e---EEEECC--------------
Confidence 1345567778888999999999999886 2 2 366665
Q ss_pred CceEEEcCEEEEecCCCCchhHHHHHHcCCC
Q 006778 268 RGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (631)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~ 298 (631)
|. +.+|.||.|+|..+... +.+..++.
T Consensus 219 -g~-i~~D~vi~a~G~~p~~~--ll~~~gl~ 245 (367)
T 1xhc_A 219 -GF-IEGKVKICAIGIVPNVD--LARRSGIH 245 (367)
T ss_dssp -EE-EECSCEEEECCEEECCH--HHHHTTCC
T ss_pred -CE-EEcCEEEECcCCCcCHH--HHHhCCCC
Confidence 66 99999999999887642 55666665
No 209
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.20 E-value=4.8e-06 Score=90.43 Aligned_cols=105 Identities=18% Similarity=0.216 Sum_probs=78.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-+|+|||||+.|+.+|..|++. |.+|+|+|+.+.+...
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~----------------------------------- 207 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRL------GAEVTLIEYMPEILPQ----------------------------------- 207 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT-----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCeEEEEEcCCccccc-----------------------------------
Confidence 35799999999999999999999 9999999998754320
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
+ ...+.+.|.+.+++.||+++++++|+++..++ +.+ .|.+.+ +.+|+
T Consensus 208 ----------~-------------~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-~~~-~v~~~~---~~~g~----- 254 (464)
T 2eq6_A 208 ----------G-------------DPETAALLRRALEKEGIRVRTKTKAVGYEKKK-DGL-HVRLEP---AEGGE----- 254 (464)
T ss_dssp ----------S-------------CHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEE-EEEEEE---TTCCS-----
T ss_pred ----------c-------------CHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC-CEE-EEEEee---cCCCc-----
Confidence 0 02345667777888999999999999998765 333 355431 01132
Q ss_pred cCceEEEcCEEEEecCCCCch
Q 006778 267 QRGVELRGRITLLAEGCRGSL 287 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~ 287 (631)
..++.+|.||+|+|.++..
T Consensus 255 --~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 255 --GEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp --CEEEEESEEEECSCEEESC
T ss_pred --eeEEEcCEEEECCCcccCC
Confidence 1479999999999988764
No 210
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.20 E-value=1.4e-05 Score=81.67 Aligned_cols=102 Identities=19% Similarity=0.214 Sum_probs=77.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
...|+|||+|+.|+..|..|++. |.+|+++++.+.+..
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~------------------------------------ 182 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNI------ASEVHLIHRRDGFRA------------------------------------ 182 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT------SSEEEEECSSSSCCC------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhc------CCeEEEEEeCCcccc------------------------------------
Confidence 35799999999999999999998 999999998764321
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccC-CCcccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKD-GSKKEN 265 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~-G~~~~~ 265 (631)
...+.+.|.+.+++.||+++++++++++..++ +.+.+|.+.+. .+ |+
T Consensus 183 ------------------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~---~~~g~---- 230 (320)
T 1trb_A 183 ------------------------EKILIKRLMDKVENGNIILHTNRTLEEVTGDQ-MGVTGVRLRDT---QNSDN---- 230 (320)
T ss_dssp ------------------------CHHHHHHHHHHHHTSSEEEECSCEEEEEEECS-SSEEEEEEECC---TTCCC----
T ss_pred ------------------------CHHHHHHHHHhcccCCeEEEcCceeEEEEcCC-CceEEEEEEec---cCCCc----
Confidence 01234456677788899999999999998765 46767776541 11 32
Q ss_pred ccCceEEEcCEEEEecCCCC
Q 006778 266 FQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s 285 (631)
+.++.+|.||.|+|..+
T Consensus 231 ---~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 231 ---IESLDVAGLFVAIGHSP 247 (320)
T ss_dssp ---CEEEECSEEEECSCEEE
T ss_pred ---eEEEEcCEEEEEeCCCC
Confidence 36899999999999654
No 211
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.19 E-value=5.8e-07 Score=97.45 Aligned_cols=45 Identities=27% Similarity=0.366 Sum_probs=35.6
Q ss_pred cccEEEECCCHHHHHHHHHHHh-hcccCCCCCeEEEEeeCCCCCCc
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQ-LCREKNVDLSVCVVEKGAEVGAH 151 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~-~~~~~~~G~~V~vlEk~~~~g~~ 151 (631)
.+||+||||||||+++|..|++ .......|++|+|||+.+.+++.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~ 48 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGL 48 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCc
Confidence 5799999999999999999998 51100117999999999877653
No 212
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.19 E-value=8.3e-06 Score=88.78 Aligned_cols=107 Identities=18% Similarity=0.221 Sum_probs=79.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||||+.|+.+|..|++. |.+|+++|+.+.+....
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~---------------------------------- 217 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRL------GADVTAVEFLGHVGGVG---------------------------------- 217 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSCSS----------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHc------CCEEEEEeccCccCCcc----------------------------------
Confidence 35799999999999999999999 99999999987543200
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
+ ...+.+.+.+.+++.||+++++++|+++..++++.+ .|.+.+ ..++
T Consensus 218 ----------~-------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~---~~~~------ 264 (474)
T 1zmd_A 218 ----------I-------------DMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKI-DVSIEA---ASGG------ 264 (474)
T ss_dssp ----------C-------------CHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCE-EEEEEE---TTSC------
T ss_pred ----------c-------------CHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceE-EEEEEe---cCCC------
Confidence 0 023455677788889999999999999987664423 344321 0011
Q ss_pred cCceEEEcCEEEEecCCCCch
Q 006778 267 QRGVELRGRITLLAEGCRGSL 287 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~ 287 (631)
++.++.+|.||+|+|..+..
T Consensus 265 -~~~~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 265 -KAEVITCDVLLVCIGRRPFT 284 (474)
T ss_dssp -CCEEEEESEEEECSCEEECC
T ss_pred -CceEEEcCEEEECcCCCcCC
Confidence 15789999999999988753
No 213
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.19 E-value=6.9e-06 Score=90.05 Aligned_cols=99 Identities=20% Similarity=0.257 Sum_probs=79.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||+|..|+..|..|++. |.+|+++|+.+.+... ++
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~d--------------------------- 222 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTEL------GVPVTVVASQDHVLPY------ED--------------------------- 222 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHT------TCCEEEECSSSSSSCC------SS---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCeEEEEEcCCccccc------cC---------------------------
Confidence 35799999999999999999999 9999999998754320 00
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
..+.+.+.+.+++.||+|+++++|+++..+++ .+ .|.+.+
T Consensus 223 -------------------------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~-~v-~v~~~~------------- 262 (499)
T 1xdi_A 223 -------------------------ADAALVLEESFAERGVRLFKNARAASVTRTGA-GV-LVTMTD------------- 262 (499)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEETTCCEEEEEECSS-SE-EEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC-EE-EEEECC-------------
Confidence 23456677888889999999999999987653 34 466555
Q ss_pred cCceEEEcCEEEEecCCCCc
Q 006778 267 QRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.||+|+|.++.
T Consensus 263 --g~~i~aD~Vv~a~G~~p~ 280 (499)
T 1xdi_A 263 --GRTVEGSHALMTIGSVPN 280 (499)
T ss_dssp --SCEEEESEEEECCCEEEC
T ss_pred --CcEEEcCEEEECCCCCcC
Confidence 678999999999998875
No 214
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.17 E-value=6.4e-06 Score=90.11 Aligned_cols=99 Identities=25% Similarity=0.275 Sum_probs=76.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||||..|+.+|..|++. |.+|+|+|+.+.+.... +
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~~-----~---------------------------- 234 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRK------GKEVVLIDVVDTCLAGY-----Y---------------------------- 234 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSTTTTT-----S----------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHC------CCeEEEEEcccchhhhH-----H----------------------------
Confidence 45799999999999999999999 99999999987542200 0
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
-..+.+.+.+.+++.||+|+++++|+++.. ++.+..|.+ +
T Consensus 235 ------------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~-~------------- 274 (490)
T 2bc0_A 235 ------------------------DRDLTDLMAKNMEEHGIQLAFGETVKEVAG--NGKVEKIIT-D------------- 274 (490)
T ss_dssp ------------------------CHHHHHHHHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEE-S-------------
T ss_pred ------------------------HHHHHHHHHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEE-C-------------
Confidence 023456677888889999999999999975 344444555 3
Q ss_pred cCceEEEcCEEEEecCCCCc
Q 006778 267 QRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.||.|+|..+.
T Consensus 275 --g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 275 --KNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp --SCEEECSEEEECCCEEEC
T ss_pred --CcEEECCEEEECCCCCcC
Confidence 568999999999997664
No 215
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.15 E-value=4.3e-06 Score=90.68 Aligned_cols=99 Identities=23% Similarity=0.318 Sum_probs=74.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-+|+|||||++|+.+|..|++. |.+|+|+|+.+.+... +
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~---------------------------- 210 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKL------GAQVSVVEARERILPT------Y---------------------------- 210 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSSSSSTT------S----------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHC------CCeEEEEEcCCccccc------c----------------------------
Confidence 35799999999999999999999 9999999998754320 0
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
...+.+.+.+.+++.||+++++++|+++.. + + + .|...+ |+
T Consensus 211 ------------------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~-~-v-~v~~~~------G~----- 251 (458)
T 1lvl_A 211 ------------------------DSELTAPVAESLKKLGIALHLGHSVEGYEN-G-C-L-LANDGK------GG----- 251 (458)
T ss_dssp ------------------------CHHHHHHHHHHHHHHTCEEETTCEEEEEET-T-E-E-EEECSS------SC-----
T ss_pred ------------------------CHHHHHHHHHHHHHCCCEEEECCEEEEEEe-C-C-E-EEEECC------Cc-----
Confidence 023455667777888999999999999865 3 2 3 344222 22
Q ss_pred cCceEEEcCEEEEecCCCCc
Q 006778 267 QRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (631)
..++.+|.||+|+|.++.
T Consensus 252 --~~~i~~D~vv~a~G~~p~ 269 (458)
T 1lvl_A 252 --QLRLEADRVLVAVGRRPR 269 (458)
T ss_dssp --CCEECCSCEEECCCEEEC
T ss_pred --eEEEECCEEEECcCCCcC
Confidence 157999999999998765
No 216
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.14 E-value=1.2e-05 Score=87.99 Aligned_cols=114 Identities=23% Similarity=0.274 Sum_probs=81.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||||..|+.+|..|++...+ .|.+|+++++.+.+....
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~--~g~~V~~v~~~~~~~~~~---------------------------------- 223 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARA--LGTEVIQLFPEKGNMGKI---------------------------------- 223 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHH--HTCEEEEECSSSSTTTTT----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhh--cCCEEEEEecCccccccc----------------------------------
Confidence 35799999999999999999873110 178999999875322100
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
++ ..+.+.+.+.+++.||++++++.|+++..++ +.+ .|.+.+
T Consensus 224 ----------l~-------------~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~-~~~-~v~l~d------------- 265 (493)
T 1m6i_A 224 ----------LP-------------EYLSNWTMEKVRREGVKVMPNAIVQSVGVSS-GKL-LIKLKD------------- 265 (493)
T ss_dssp ----------SC-------------HHHHHHHHHHHHTTTCEEECSCCEEEEEEET-TEE-EEEETT-------------
T ss_pred ----------CC-------------HHHHHHHHHHHHhcCCEEEeCCEEEEEEecC-CeE-EEEECC-------------
Confidence 00 2345567778888999999999999997654 444 677766
Q ss_pred cCceEEEcCEEEEecCCCCchhHHHHHHcCCC
Q 006778 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~ 298 (631)
|.++.+|.||.|+|..+.. .+.+..++.
T Consensus 266 --G~~i~aD~Vv~a~G~~pn~--~l~~~~gl~ 293 (493)
T 1m6i_A 266 --GRKVETDHIVAAVGLEPNV--ELAKTGGLE 293 (493)
T ss_dssp --SCEEEESEEEECCCEEECC--TTHHHHTCC
T ss_pred --CCEEECCEEEECCCCCccH--HHHHHcCCc
Confidence 6789999999999988753 244455554
No 217
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.14 E-value=1.2e-05 Score=88.21 Aligned_cols=103 Identities=15% Similarity=0.140 Sum_probs=78.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||||..|+.+|..|++.. .+|.+|+|+|+.+.+... ++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~---~~g~~Vtlv~~~~~~l~~------~d--------------------------- 234 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYK---PPGGKVTLCYRNNLILRG------FD--------------------------- 234 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHC---CTTCEEEEEESSSSSCTT------SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhC---CCCCeEEEEEcCCccccc------cC---------------------------
Confidence 357999999999999999998861 128899999998754210 00
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
..+.+.|.+.+++.||+|+++++|+++..++++.+ .|.+.+
T Consensus 235 -------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-~v~~~~------------- 275 (495)
T 2wpf_A 235 -------------------------ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSK-HVTFES------------- 275 (495)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCE-EEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceE-EEEECC-------------
Confidence 13455677778889999999999999987654433 577765
Q ss_pred cCceEEEcCEEEEecCCCCc
Q 006778 267 QRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.||+|+|.++.
T Consensus 276 --G~~i~~D~vv~a~G~~p~ 293 (495)
T 2wpf_A 276 --GKTLDVDVVMMAIGRIPR 293 (495)
T ss_dssp --SCEEEESEEEECSCEEEC
T ss_pred --CcEEEcCEEEECCCCccc
Confidence 668999999999997764
No 218
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.12 E-value=1.1e-05 Score=87.68 Aligned_cols=99 Identities=20% Similarity=0.231 Sum_probs=79.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
...|+|||+|+.|+..|..|++. |.+|+++++.+.+...
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~------g~~Vt~v~~~~~~l~~----------------------------------- 208 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGL------GVKTTLIYRGKEILSR----------------------------------- 208 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCeEEEEEcCCccccc-----------------------------------
Confidence 45799999999999999999999 9999999998753210
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEE-eCCCccccCCCcccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIG-TNDMGIAKDGSKKEN 265 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~-~~d~g~~~~G~~~~~ 265 (631)
+ -..+.+.|.+.+++.||+|++++.|+++..++++.+ .|. +.+
T Consensus 209 ----------~-------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~------------ 252 (463)
T 4dna_A 209 ----------F-------------DQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRR-VATTMKH------------ 252 (463)
T ss_dssp ----------S-------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCE-EEEESSS------------
T ss_pred ----------c-------------CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEE-EEEEcCC------------
Confidence 0 023466678888889999999999999988765543 577 766
Q ss_pred ccCceEEEcCEEEEecCCCCc
Q 006778 266 FQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s~ 286 (631)
|. +.+|.||+|+|.++.
T Consensus 253 ---g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 253 ---GE-IVADQVMLALGRMPN 269 (463)
T ss_dssp ---CE-EEESEEEECSCEEES
T ss_pred ---Ce-EEeCEEEEeeCcccC
Confidence 66 999999999997653
No 219
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.12 E-value=1.1e-05 Score=88.17 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=79.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||||..|+.+|..|++.. .+|.+|+++|+.+.+... ++
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~---~~g~~Vtlv~~~~~~l~~------~d--------------------------- 230 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYK---ARGGQVDLAYRGDMILRG------FD--------------------------- 230 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHS---CTTCEEEEEESSSSSSTT------SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhc---cCcCeEEEEEcCCCcccc------cC---------------------------
Confidence 357999999999999999998862 138899999998754210 00
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
..+.+.|.+.+++.||+|+++++|+++..++++.+ .|.+.+
T Consensus 231 -------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-~v~~~~------------- 271 (490)
T 1fec_A 231 -------------------------SELRKQLTEQLRANGINVRTHENPAKVTKNADGTR-HVVFES------------- 271 (490)
T ss_dssp -------------------------HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCE-EEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEE-EEEECC-------------
Confidence 23456677888889999999999999987654433 577765
Q ss_pred cCceEEEcCEEEEecCCCCc
Q 006778 267 QRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.||+|+|.++.
T Consensus 272 --G~~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 272 --GAEADYDVVMLAIGRVPR 289 (490)
T ss_dssp --SCEEEESEEEECSCEEES
T ss_pred --CcEEEcCEEEEccCCCcC
Confidence 668999999999997654
No 220
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.12 E-value=1.8e-05 Score=87.58 Aligned_cols=67 Identities=13% Similarity=0.194 Sum_probs=46.4
Q ss_pred HHHHHHhcCcEEecCceEEEEEEcCC--CcEEEEEeCCCccccCCCccccccCceEE---EcCEEEEecCCCCchhHHHH
Q 006778 218 LGGKAEELGVEIYPGFAASEILYDAD--NKVIGIGTNDMGIAKDGSKKENFQRGVEL---RGRITLLAEGCRGSLSEKLI 292 (631)
Q Consensus 218 L~~~a~~~Gv~i~~g~~v~~i~~~~~--g~v~gV~~~d~g~~~~G~~~~~f~~g~~i---~a~~vV~A~G~~s~~~~~l~ 292 (631)
+...+++.|++|+.++.|++|+.+++ ++++||.+.+ .+|+. .++ .++.||+|+|+.. ..+|.
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~----~~g~~-------~~~~v~a~k~VILaaGa~~--sp~lL 266 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRD----SNGTP-------HQAFVRSKGEVIVSAGTIG--TPQLL 266 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEEC----TTSCE-------EEEEEEEEEEEEECCHHHH--HHHHH
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEe----CCCce-------EEEEeccCCEEEEcCcccC--CHHHH
Confidence 33445667899999999999999863 4788998764 23332 345 5789999999875 34454
Q ss_pred HHcCC
Q 006778 293 KNFKL 297 (631)
Q Consensus 293 ~~~g~ 297 (631)
...|+
T Consensus 267 ~~SGi 271 (536)
T 1ju2_A 267 LLSGV 271 (536)
T ss_dssp HHTTE
T ss_pred HHcCC
Confidence 44443
No 221
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.12 E-value=1.2e-05 Score=87.25 Aligned_cols=104 Identities=18% Similarity=0.215 Sum_probs=77.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
...|+|||||..|+.+|..|++. |.+|+++|+.+.+... +
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~---------------------------- 213 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARL------GAEVTVVEFAPRCAPT------L---------------------------- 213 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT------S----------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHh------CCEEEEEecCCccccc------C----------------------------
Confidence 35799999999999999999999 9999999998754320 0
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHH-HhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKA-EELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a-~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (631)
...+.+.+.+.+ ++.||+++++++|+++..++++ + .|.+.+ .+|+
T Consensus 214 ------------------------d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~----~~g~---- 259 (468)
T 2qae_A 214 ------------------------DEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDS-V-SLEVEG----KNGK---- 259 (468)
T ss_dssp ------------------------CHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSS-E-EEEEEC----C-------
T ss_pred ------------------------CHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCe-E-EEEEEc----CCCc----
Confidence 023456677777 8899999999999999876543 3 355431 1222
Q ss_pred ccCceEEEcCEEEEecCCCCch
Q 006778 266 FQRGVELRGRITLLAEGCRGSL 287 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s~~ 287 (631)
+.++.+|.||+|+|.++..
T Consensus 260 ---~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 260 ---RETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp ---EEEEEESEEEECSCEEECC
T ss_pred ---eEEEECCEEEECCCcccCC
Confidence 2679999999999988753
No 222
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.11 E-value=3.5e-06 Score=94.23 Aligned_cols=68 Identities=18% Similarity=0.333 Sum_probs=47.7
Q ss_pred HHHHHHHhcCcEEecCceEEEEEEcCC---CcEEEEEeCCCccccCCCccccccCceEEEc-CEEEEecCCCCchhHHHH
Q 006778 217 WLGGKAEELGVEIYPGFAASEILYDAD---NKVIGIGTNDMGIAKDGSKKENFQRGVELRG-RITLLAEGCRGSLSEKLI 292 (631)
Q Consensus 217 ~L~~~a~~~Gv~i~~g~~v~~i~~~~~---g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a-~~vV~A~G~~s~~~~~l~ 292 (631)
+|...+.+.|++|+.++.|++|+.+++ ++++||...+ .+|+. .+++| +.||+|+|+..+ .+|.
T Consensus 236 ~l~~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~----~~g~~-------~~v~A~k~VILaaG~~~s--p~lL 302 (587)
T 1gpe_A 236 WLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGT----NKAVN-------FDVFAKHEVLLAAGSAIS--PLIL 302 (587)
T ss_dssp HTTTTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEE----ETTEE-------EEEEEEEEEEECSCTTTH--HHHH
T ss_pred HHHHhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEe----CCCcE-------EEEEecccEEEccCCCCC--HHHH
Confidence 343444556899999999999998753 4788888753 23332 57889 899999999874 4444
Q ss_pred HHcCC
Q 006778 293 KNFKL 297 (631)
Q Consensus 293 ~~~g~ 297 (631)
...|+
T Consensus 303 ~~SGI 307 (587)
T 1gpe_A 303 EYSGI 307 (587)
T ss_dssp HHTTE
T ss_pred HhCCC
Confidence 44443
No 223
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.11 E-value=1.4e-06 Score=100.15 Aligned_cols=40 Identities=35% Similarity=0.547 Sum_probs=36.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH 151 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~ 151 (631)
..+||+|||||||||++|+.|++. |++|+|||+.+.+|+.
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~------G~~Vtlie~~~~~GG~ 427 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMES------GYTVHLTDTAEKIGGH 427 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSTTTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCCCcCCe
Confidence 458999999999999999999999 9999999999888764
No 224
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.10 E-value=5.9e-06 Score=86.05 Aligned_cols=36 Identities=36% Similarity=0.352 Sum_probs=33.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g 149 (631)
+||+|||||+||+.+|+.|++. |++|+|+|+++..+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~------G~~V~liE~~~~~~ 37 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL------GVPVRLFEMRPKRM 37 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEECCTTTSC
T ss_pred CCEEEECchHHHHHHHHHHHHC------CCcEEEEeccCCcC
Confidence 5999999999999999999999 99999999987443
No 225
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.10 E-value=1.1e-05 Score=88.01 Aligned_cols=99 Identities=19% Similarity=0.267 Sum_probs=79.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
..+|+|||+|+.|+..|..|++. |.+|+++++.+.+... ++
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~------g~~Vtli~~~~~~l~~------~~--------------------------- 231 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGL------GVKTTLLHRGDLILRN------FD--------------------------- 231 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT------SC---------------------------
T ss_pred CCcEEEECcCHHHHHHHHHHHHc------CCeEEEEECCCccccc------cC---------------------------
Confidence 45799999999999999999999 9999999988753210 00
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
..+.+.|.+.+++.||+|+++++|+++..+++ .+ .|.+.+
T Consensus 232 -------------------------~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~-~v-~v~~~~------------- 271 (484)
T 3o0h_A 232 -------------------------YDLRQLLNDAMVAKGISIIYEATVSQVQSTEN-CY-NVVLTN------------- 271 (484)
T ss_dssp -------------------------HHHHHHHHHHHHHHTCEEESSCCEEEEEECSS-SE-EEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCC-EE-EEEECC-------------
Confidence 23456677788888999999999999987764 44 577766
Q ss_pred cCceEEEcCEEEEecCCCCc
Q 006778 267 QRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.||+|+|..+.
T Consensus 272 --g~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 272 --GQTICADRVMLATGRVPN 289 (484)
T ss_dssp --SCEEEESEEEECCCEEEC
T ss_pred --CcEEEcCEEEEeeCCCcC
Confidence 678999999999997664
No 226
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.09 E-value=1.3e-05 Score=87.06 Aligned_cols=102 Identities=23% Similarity=0.310 Sum_probs=77.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||||..|+.+|..|++. |.+|+|+|+.+.+... ++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~~--------------------------- 211 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNY------GVDVTIVEFLPRALPN------ED--------------------------- 211 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSSTT------SC---------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHc------CCeEEEEEcCCccccc------cC---------------------------
Confidence 35799999999999999999999 9999999998754210 00
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
..+.+.+.+.+++.||+++++++++++..+++ .+ .|.+.+ +|+
T Consensus 212 -------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~-~v~~~~-----~g~----- 254 (464)
T 2a8x_A 212 -------------------------ADVSKEIEKQFKKLGVTILTATKVESIADGGS-QV-TVTVTK-----DGV----- 254 (464)
T ss_dssp -------------------------HHHHHHHHHHHHHHTCEEECSCEEEEEEECSS-CE-EEEEES-----SSC-----
T ss_pred -------------------------HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCC-eE-EEEEEc-----CCc-----
Confidence 23455677777888999999999999987653 33 355431 121
Q ss_pred cCceEEEcCEEEEecCCCCc
Q 006778 267 QRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (631)
+.++.+|.||.|+|..+.
T Consensus 255 --~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 255 --AQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp --EEEEEESEEEECSCEEEC
T ss_pred --eEEEEcCEEEECCCCCcc
Confidence 268999999999998775
No 227
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.09 E-value=2.2e-05 Score=85.42 Aligned_cols=111 Identities=23% Similarity=0.277 Sum_probs=84.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
..+|+|||+|..|+.+|..|++.. |.+|+++|+.+.+....
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~-----g~~Vtlv~~~~~~l~~~---------------------------------- 199 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMW-----GIDTTVVELADQIMPGF---------------------------------- 199 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHH-----CCEEEEECSSSSSSTTT----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhc-----CCcEEEEEccCcccccc----------------------------------
Confidence 357999999999999999998852 78999999876432100
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
+ -..+.+.|.+.+++.||+++++++|+++..++ +.+. |.+.+
T Consensus 200 ----------~-------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~-v~~~~------------- 241 (472)
T 3iwa_A 200 ----------T-------------SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN-GKVA-RVITD------------- 241 (472)
T ss_dssp ----------S-------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEE-EEEES-------------
T ss_pred ----------c-------------CHHHHHHHHHHHHhcCCEEEeCCEEEEEEccC-CeEE-EEEeC-------------
Confidence 0 02456677888888999999999999998754 4553 66655
Q ss_pred cCceEEEcCEEEEecCCCCchhHHHHHHcCCC
Q 006778 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~ 298 (631)
|.++.+|.||+|+|.++.. .+.+..|+.
T Consensus 242 --g~~i~aD~Vv~a~G~~p~~--~l~~~~gl~ 269 (472)
T 3iwa_A 242 --KRTLDADLVILAAGVSPNT--QLARDAGLE 269 (472)
T ss_dssp --SCEEECSEEEECSCEEECC--HHHHHHTCC
T ss_pred --CCEEEcCEEEECCCCCcCH--HHHHhCCcc
Confidence 6789999999999998753 255566665
No 228
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.07 E-value=1.3e-05 Score=89.78 Aligned_cols=107 Identities=16% Similarity=0.215 Sum_probs=83.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
...|+|||||..|+.+|..|++. |.+|+++|+.+.+... +
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~------~---------------------------- 226 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRER------GIEVTLVEMANQVMPP------I---------------------------- 226 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT------S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhC------CCeEEEEecCCccccc------C----------------------------
Confidence 35799999999999999999999 9999999987754320 0
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
...+.+.+.+.+++.||++++++.|+++..+++ +|.+.+
T Consensus 227 ------------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~----~v~~~~------------- 265 (588)
T 3ics_A 227 ------------------------DYEMAAYVHEHMKNHDVELVFEDGVDALEENGA----VVRLKS------------- 265 (588)
T ss_dssp ------------------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT----EEEETT-------------
T ss_pred ------------------------CHHHHHHHHHHHHHcCCEEEECCeEEEEecCCC----EEEECC-------------
Confidence 023456677788889999999999999976542 366665
Q ss_pred cCceEEEcCEEEEecCCCCchhHHHHHHcCCC
Q 006778 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~ 298 (631)
|.++.+|.||+|+|..+.. .+.+..|+.
T Consensus 266 --g~~i~~D~Vi~a~G~~p~~--~~l~~~g~~ 293 (588)
T 3ics_A 266 --GSVIQTDMLILAIGVQPES--SLAKGAGLA 293 (588)
T ss_dssp --SCEEECSEEEECSCEEECC--HHHHHTTCC
T ss_pred --CCEEEcCEEEEccCCCCCh--HHHHhcCce
Confidence 6789999999999988753 355666665
No 229
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.05 E-value=2.4e-05 Score=84.94 Aligned_cols=98 Identities=17% Similarity=0.163 Sum_probs=77.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||||+.|+.+|..|++. |.+|+++|+.+.+.. ++
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~-------~~--------------------------- 215 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARL------GSKVTVLARNTLFFR-------ED--------------------------- 215 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCTTTT-------SC---------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHc------CCEEEEEEECCccCC-------CC---------------------------
Confidence 35799999999999999999999 999999998764321 00
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
..+.+.|.+.+++.||+++++++|+++..++ + .+.|.+.+
T Consensus 216 -------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~-~~~v~~~~------------- 255 (467)
T 1zk7_A 216 -------------------------PAIGEAVTAAFRAEGIEVLEHTQASQVAHMD-G-EFVLTTTH------------- 255 (467)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEETTCCEEEEEEET-T-EEEEEETT-------------
T ss_pred -------------------------HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-C-EEEEEECC-------------
Confidence 2345667788888999999999999998654 3 33566543
Q ss_pred cCceEEEcCEEEEecCCCCch
Q 006778 267 QRGVELRGRITLLAEGCRGSL 287 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~ 287 (631)
.++.+|.||+|+|.++..
T Consensus 256 ---~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 256 ---GELRADKLLVATGRTPNT 273 (467)
T ss_dssp ---EEEEESEEEECSCEEESC
T ss_pred ---cEEEcCEEEECCCCCcCC
Confidence 579999999999988753
No 230
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.05 E-value=1e-05 Score=87.97 Aligned_cols=104 Identities=17% Similarity=0.235 Sum_probs=78.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||||+.|+.+|..|++. |.+|+|+|+.+.+... +
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtli~~~~~~l~~------~---------------------------- 216 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRI------GSEVTVVEFASEIVPT------M---------------------------- 216 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHH------TCEEEEECSSSSSSTT------S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCcEEEEEcCCccccc------c----------------------------
Confidence 35799999999999999999999 9999999998754320 0
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
-..+.+.+.+.+++.||+++++++|.++..++++ + .|.+.+ ..+|+
T Consensus 217 ------------------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~---~~~g~----- 262 (470)
T 1dxl_A 217 ------------------------DAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDG-V-KLTVEP---SAGGE----- 262 (470)
T ss_dssp ------------------------CHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSS-E-EEEEEE---SSSCC-----
T ss_pred ------------------------cHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCe-E-EEEEEe---cCCCc-----
Confidence 0234566777888899999999999999766533 3 355431 01232
Q ss_pred cCceEEEcCEEEEecCCCCc
Q 006778 267 QRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (631)
+.++.+|.||+|+|..+.
T Consensus 263 --~~~~~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 263 --QTIIEADVVLVSAGRTPF 280 (470)
T ss_dssp --CEEEEESEEECCCCEEEC
T ss_pred --ceEEECCEEEECCCCCcC
Confidence 368999999999998764
No 231
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.05 E-value=3.1e-06 Score=90.52 Aligned_cols=42 Identities=33% Similarity=0.549 Sum_probs=38.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCC-CeEEEEeeCCCCCCccc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVD-LSVCVVEKGAEVGAHII 153 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G-~~V~vlEk~~~~g~~~~ 153 (631)
+.+||+|||||++||+||+.|++. | .+|+|+|+++.+|+++.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~------g~~~v~v~E~~~~~GG~~~ 47 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA------GFHDYTILERTDHVGGKCH 47 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT------TCCCEEEECSSSCSSTTCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC------CCCcEEEEECCCCCCCccc
Confidence 468999999999999999999999 9 99999999999988653
No 232
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.04 E-value=3.4e-06 Score=89.76 Aligned_cols=43 Identities=30% Similarity=0.526 Sum_probs=38.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~ 153 (631)
.++||+|||||++||++|+.|++. +|.+|+|+|+++.+|+++.
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~-----~g~~v~v~E~~~~~GG~~~ 48 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQ-----LDKRVLVLERRPHIGGNAY 48 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHH-----SCCCEEEECSSSSSSGGGC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHh-----CCCCEEEEeCCCCCCCeee
Confidence 468999999999999999999986 3899999999999998763
No 233
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.03 E-value=2.7e-05 Score=79.23 Aligned_cols=98 Identities=24% Similarity=0.279 Sum_probs=72.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||+|+.|+.+|..|++. |.+|+++++.+.+..
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~------------------------------------ 181 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGI------VEHVTLLEFAPEMKA------------------------------------ 181 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT------BSEEEEECSSSSCCS------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHh------CCEEEEEEeCcccCc------------------------------------
Confidence 35799999999999999999998 999999998764311
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHh-cCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~-~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (631)
...+.+.+++ .||+++++++++++..++ +++.+|.+.+. .+|+
T Consensus 182 ----------------------------~~~~~~~l~~~~gv~v~~~~~v~~i~~~~-~~v~~v~~~~~---~~g~---- 225 (310)
T 1fl2_A 182 ----------------------------DQVLQDKLRSLKNVDIILNAQTTEVKGDG-SKVVGLEYRDR---VSGD---- 225 (310)
T ss_dssp ----------------------------CHHHHHHHHTCTTEEEESSEEEEEEEESS-SSEEEEEEEET---TTCC----
T ss_pred ----------------------------cHHHHHHHhhCCCeEEecCCceEEEEcCC-CcEEEEEEEEC---CCCc----
Confidence 0113344455 699999999999998654 56667776541 1232
Q ss_pred ccCceEEEcCEEEEecCCCC
Q 006778 266 FQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s 285 (631)
..++.+|.||.|+|..+
T Consensus 226 ---~~~i~~D~vi~a~G~~p 242 (310)
T 1fl2_A 226 ---IHNIELAGIFVQIGLLP 242 (310)
T ss_dssp ---EEEEECSEEEECSCEEE
T ss_pred ---EEEEEcCEEEEeeCCcc
Confidence 25799999999999544
No 234
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.03 E-value=2.5e-05 Score=86.27 Aligned_cols=100 Identities=21% Similarity=0.168 Sum_probs=79.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
..-.++|||||+.|+..|..+++. |.+|+|+++...+.. +
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~l------G~~VTii~~~~~L~~-------------------~--------------- 261 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSL------GYDVTVAVRSIVLRG-------------------F--------------- 261 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH------TCCEEEEESSCSSTT-------------------S---------------
T ss_pred CCceEEEECCCHHHHHHHHHHHhc------CCeEEEecccccccc-------------------c---------------
Confidence 346799999999999999999999 999999987543211 0
Q ss_pred eEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccc
Q 006778 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (631)
Q Consensus 186 ~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (631)
-.++.+.+.+.+++.|++++.+..+.++...++ .+ .|.+.+
T Consensus 262 -------------------------D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~-~~-~v~~~~------------ 302 (542)
T 4b1b_A 262 -------------------------DQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDD-KI-LVEFSD------------ 302 (542)
T ss_dssp -------------------------CHHHHHHHHHHHHHTTCEEEETCCEEEEEEETT-EE-EEEETT------------
T ss_pred -------------------------chhHHHHHHHHHHhhcceeecceEEEEEEecCC-eE-EEEEcC------------
Confidence 024466678888889999999999999988764 33 466665
Q ss_pred ccCceEEEcCEEEEecCCCCch
Q 006778 266 FQRGVELRGRITLLAEGCRGSL 287 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s~~ 287 (631)
+.++.+|.|++|+|.++.+
T Consensus 303 ---~~~~~~D~vLvAvGR~Pnt 321 (542)
T 4b1b_A 303 ---KTSELYDTVLYAIGRKGDI 321 (542)
T ss_dssp ---SCEEEESEEEECSCEEESC
T ss_pred ---CCeEEEEEEEEcccccCCc
Confidence 5678899999999988764
No 235
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.03 E-value=3.8e-06 Score=88.97 Aligned_cols=43 Identities=35% Similarity=0.493 Sum_probs=39.3
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccc
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~ 153 (631)
...+||+|||||++||++|+.|++. |.+|+|+|+++.+|+.+.
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~------g~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASS------GQRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSSGGGC
T ss_pred CCCCCEEEECccHHHHHHHHHHHHC------CCceEEEeccCCCCCccc
Confidence 3579999999999999999999999 999999999999888764
No 236
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.02 E-value=3.2e-05 Score=84.64 Aligned_cols=102 Identities=21% Similarity=0.218 Sum_probs=76.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||||+.|+.+|..|++. |.+|+++|+.+.+... ++
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~d--------------------------- 214 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRL------GVIVKVFGRSGSVANL------QD--------------------------- 214 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHT------TCEEEEECCTTCCTTC------CC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCeEEEEEECCccccc------CC---------------------------
Confidence 45799999999999999999999 9999999998764320 00
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
..+.+.+.+.+++. |+++++++++++..+++ .+ .|.+.+ .+|+.
T Consensus 215 -------------------------~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~-~v-~v~~~~----~~G~~---- 258 (492)
T 3ic9_A 215 -------------------------EEMKRYAEKTFNEE-FYFDAKARVISTIEKED-AV-EVIYFD----KSGQK---- 258 (492)
T ss_dssp -------------------------HHHHHHHHHHHHTT-SEEETTCEEEEEEECSS-SE-EEEEEC----TTCCE----
T ss_pred -------------------------HHHHHHHHHHHhhC-cEEEECCEEEEEEEcCC-EE-EEEEEe----CCCce----
Confidence 13455566666767 99999999999987764 34 255432 12321
Q ss_pred cCceEEEcCEEEEecCCCCc
Q 006778 267 QRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (631)
.++.+|.||+|+|..+.
T Consensus 259 ---~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 259 ---TTESFQYVLAATGRKAN 275 (492)
T ss_dssp ---EEEEESEEEECSCCEES
T ss_pred ---EEEECCEEEEeeCCccC
Confidence 68999999999998764
No 237
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.01 E-value=2.5e-05 Score=80.27 Aligned_cols=98 Identities=17% Similarity=0.162 Sum_probs=73.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
...|+|||+|+.|+.+|..|++. |.+|+++++.+.+..
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~------g~~v~~v~~~~~~~~------------------------------------ 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKY------GSKVFMLVRKDHLRA------------------------------------ 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT------SSEEEEECSSSSCCS------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCEEEEEEcCCccCC------------------------------------
Confidence 35799999999999999999999 999999998764321
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhc-CcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEEL-GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~-Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (631)
.+.+.+.+.+. ||++++++.++++..++ +.+.+|.+.+. .+|+
T Consensus 211 ----------------------------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~-~~~~~v~~~~~---~~g~---- 254 (338)
T 3itj_A 211 ----------------------------STIMQKRAEKNEKIEILYNTVALEAKGDG-KLLNALRIKNT---KKNE---- 254 (338)
T ss_dssp ----------------------------CHHHHHHHHHCTTEEEECSEEEEEEEESS-SSEEEEEEEET---TTTE----
T ss_pred ----------------------------CHHHHHHHHhcCCeEEeecceeEEEEccc-CcEEEEEEEEC---CCCc----
Confidence 01234444444 99999999999998766 45666776541 1222
Q ss_pred ccCceEEEcCEEEEecCCCC
Q 006778 266 FQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s 285 (631)
+.++.+|.||.|+|..+
T Consensus 255 ---~~~i~~D~vi~a~G~~p 271 (338)
T 3itj_A 255 ---ETDLPVSGLFYAIGHTP 271 (338)
T ss_dssp ---EEEEECSEEEECSCEEE
T ss_pred ---eEEEEeCEEEEEeCCCC
Confidence 46899999999999654
No 238
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.01 E-value=3.8e-05 Score=79.06 Aligned_cols=101 Identities=19% Similarity=0.208 Sum_probs=75.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||+|..|+.+|..|++. |.+|+++++.+.+...
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~------g~~V~~v~~~~~~~~~----------------------------------- 190 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDT------ARRITLIHRRPQFRAH----------------------------------- 190 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTT------SSEEEEECSSSSCCSC-----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhh------CCEEEEEEcCCccCcc-----------------------------------
Confidence 35799999999999999999998 9999999987643210
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
..+.+.|.+.+++.||++++++.+.++..+ +.+.+|.+.+ ..+|+
T Consensus 191 -------------------------~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~--~~~~~v~~~~---~~~g~----- 235 (335)
T 2zbw_A 191 -------------------------EASVKELMKAHEEGRLEVLTPYELRRVEGD--ERVRWAVVFH---NQTQE----- 235 (335)
T ss_dssp -------------------------HHHHHHHHHHHHTTSSEEETTEEEEEEEES--SSEEEEEEEE---TTTCC-----
T ss_pred -------------------------HHHHHHHHhccccCCeEEecCCcceeEccC--CCeeEEEEEE---CCCCc-----
Confidence 112344666677789999999999999873 4455666642 01232
Q ss_pred cCceEEEcCEEEEecCCCC
Q 006778 267 QRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s 285 (631)
..++.+|.||.|+|..+
T Consensus 236 --~~~i~~D~vi~a~G~~p 252 (335)
T 2zbw_A 236 --ELALEVDAVLILAGYIT 252 (335)
T ss_dssp --EEEEECSEEEECCCEEE
T ss_pred --eEEEecCEEEEeecCCC
Confidence 26899999999999654
No 239
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.01 E-value=2e-05 Score=82.24 Aligned_cols=100 Identities=21% Similarity=0.270 Sum_probs=74.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
-.|+|||+|..|+.+|..|++. |.+|+++++.+.+...
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~------g~~V~lv~~~~~~~~~------------------------------------ 201 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKN------AASVTLVHRGHEFQGH------------------------------------ 201 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTT------SSEEEEECSSSSCSSC------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhc------CCEEEEEEcCCCCCCC------------------------------------
Confidence 4799999999999999999998 9999999987643210
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccccc
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~ 267 (631)
..+.+.|.+..++.||+++++++++++..++ +.+.+|.+.. .+|+
T Consensus 202 ------------------------~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~----~~g~------ 246 (360)
T 3ab1_A 202 ------------------------GKTAHEVERARANGTIDVYLETEVASIEESN-GVLTRVHLRS----SDGS------ 246 (360)
T ss_dssp ------------------------SHHHHSSHHHHHHTSEEEESSEEEEEEEEET-TEEEEEEEEE----TTCC------
T ss_pred ------------------------HHHHHHHHHHhhcCceEEEcCcCHHHhccCC-CceEEEEEEe----cCCC------
Confidence 0112335555667899999999999998764 5565666641 1232
Q ss_pred CceEEEcCEEEEecCCCC
Q 006778 268 RGVELRGRITLLAEGCRG 285 (631)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s 285 (631)
..++.+|.||.|+|..+
T Consensus 247 -~~~i~~D~vi~a~G~~p 263 (360)
T 3ab1_A 247 -KWTVEADRLLILIGFKS 263 (360)
T ss_dssp -EEEEECSEEEECCCBCC
T ss_pred -eEEEeCCEEEECCCCCC
Confidence 16799999999999665
No 240
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.01 E-value=3e-05 Score=84.81 Aligned_cols=105 Identities=20% Similarity=0.299 Sum_probs=79.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||||..|+..|..|++. |.+|+++|+.+.+... ++
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~d--------------------------- 238 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARL------GAKVTVVEFLDTILGG------MD--------------------------- 238 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSSSSSSS------SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCEEEEEecccccccc------CC---------------------------
Confidence 35799999999999999999999 9999999988754320 00
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
..+.+.+.+.+++.||+++++++++++..++++ + .|.+.+. .+|+
T Consensus 239 -------------------------~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~-~-~v~~~~~---~~g~----- 283 (491)
T 3urh_A 239 -------------------------GEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDG-A-KVTFEPV---KGGE----- 283 (491)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTE-E-EEEEEET---TSCC-----
T ss_pred -------------------------HHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCE-E-EEEEEec---CCCc-----
Confidence 234566777788899999999999999876633 3 3555430 1132
Q ss_pred cCceEEEcCEEEEecCCCCch
Q 006778 267 QRGVELRGRITLLAEGCRGSL 287 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~ 287 (631)
..++.+|.||.|+|..+..
T Consensus 284 --~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 284 --ATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp --CEEEEESEEEECCCCEECC
T ss_pred --eEEEEcCEEEEeeCCccCC
Confidence 2689999999999987753
No 241
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.00 E-value=2.2e-05 Score=80.33 Aligned_cols=97 Identities=20% Similarity=0.199 Sum_probs=72.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
..|+|||+|+.|+..|..|++. |.+|+++++.+.+..
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~------g~~V~~i~~~~~~~~------------------------------------- 192 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEY------VKNVTIIEYMPKYMC------------------------------------- 192 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT------BSEEEEECSSSSCCS-------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhh------CCcEEEEEcCCccCC-------------------------------------
Confidence 5799999999999999999998 999999998764321
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccccc
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~ 267 (631)
...+.+.+++.||+++++++++++..++ +++.+|.+.+ ..+|+
T Consensus 193 ---------------------------~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~---~~~g~------ 235 (319)
T 3cty_A 193 ---------------------------ENAYVQEIKKRNIPYIMNAQVTEIVGDG-KKVTGVKYKD---RTTGE------ 235 (319)
T ss_dssp ---------------------------CHHHHHHHHHTTCCEECSEEEEEEEESS-SSEEEEEEEE---TTTCC------
T ss_pred ---------------------------CHHHHHHHhcCCcEEEcCCeEEEEecCC-ceEEEEEEEE---cCCCc------
Confidence 0113444557899999999999998764 5566676642 01232
Q ss_pred CceEEEcCEEEEecCCCC
Q 006778 268 RGVELRGRITLLAEGCRG 285 (631)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s 285 (631)
..++.+|.||+|+|..+
T Consensus 236 -~~~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 236 -EKLIETDGVFIYVGLIP 252 (319)
T ss_dssp -EEEECCSEEEECCCEEE
T ss_pred -eEEEecCEEEEeeCCcc
Confidence 14799999999999654
No 242
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.00 E-value=4.2e-05 Score=83.30 Aligned_cols=107 Identities=20% Similarity=0.047 Sum_probs=79.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||||..|+.+|..|++. |.+|+++++.+.+... +
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~------~---------------------------- 226 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSAL------GSKTSLMIRHDKVLRS------F---------------------------- 226 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT------S----------------------------
T ss_pred CccEEEECCCHHHHHHHHHHHHc------CCeEEEEEeCCccccc------c----------------------------
Confidence 35799999999999999999999 9999999997754310 0
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
-..+.+.+.+.+++.||++++++.++++..++++..+.|.+.+. .+|+.
T Consensus 227 ------------------------d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~---~~g~~---- 275 (478)
T 3dk9_A 227 ------------------------DSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVP---GRLPV---- 275 (478)
T ss_dssp ------------------------CHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCT---TSCCE----
T ss_pred ------------------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccC---CCCcc----
Confidence 02345567777888999999999999998776562335666541 11210
Q ss_pred cCceEEEcCEEEEecCCCC
Q 006778 267 QRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s 285 (631)
+|.++.+|.||+|+|..+
T Consensus 276 -~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 276 -MTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp -EEEEEEESEEEECSCEEE
T ss_pred -cceEEEcCEEEEeecccc
Confidence 136899999999999655
No 243
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.99 E-value=4.7e-06 Score=87.55 Aligned_cols=41 Identities=37% Similarity=0.484 Sum_probs=37.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeC-CCCCCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKG-AEVGAHI 152 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~-~~~g~~~ 152 (631)
..+||+|||||++||++|+.|++. |++|+|+|++ +.+|+.+
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~------G~~V~VlE~~~~~vGGr~ 84 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRA------GHDVTILEANANRVGGRI 84 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHT------SCEEEEECSCSSCCBTTC
T ss_pred CCceEEEECCCHHHHHHHHHHHHC------CCcEEEEeccccccCCce
Confidence 468999999999999999999999 9999999999 8888754
No 244
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.98 E-value=5.3e-06 Score=90.62 Aligned_cols=41 Identities=34% Similarity=0.596 Sum_probs=38.1
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~ 152 (631)
+.+||+|||||++||++|+.|++. |++|+|+|+.+.+|+.+
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~------g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKA------GYKVTVLEARTRPGGRV 50 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC------CCCEEEEeccCCCCCce
Confidence 468999999999999999999999 99999999999998864
No 245
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.98 E-value=4.2e-05 Score=83.22 Aligned_cols=102 Identities=19% Similarity=0.154 Sum_probs=77.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
...|+|||+|+.|+..|..|++. |.+|+++|+.+.+...
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~----------------------------------- 218 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARL------GAEVTVLEAMDKFLPA----------------------------------- 218 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSSSTT-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCcEEEEecCCCcCcc-----------------------------------
Confidence 45799999999999999999999 9999999998754210
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
+ -..+.+.+.+.+++.||+++++++++++..++++ + .|.+.+ .+|
T Consensus 219 ----------~-------------~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~-~-~v~~~~----~~g------ 263 (476)
T 3lad_A 219 ----------V-------------DEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQ-V-TVKFVD----AEG------ 263 (476)
T ss_dssp ----------S-------------CHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSC-E-EEEEES----SSE------
T ss_pred ----------c-------------CHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCE-E-EEEEEe----CCC------
Confidence 0 0234566777788899999999999999876643 3 355543 011
Q ss_pred cCceEEEcCEEEEecCCCCc
Q 006778 267 QRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~ 286 (631)
..++.+|.||.|+|..+.
T Consensus 264 --~~~~~~D~vi~a~G~~p~ 281 (476)
T 3lad_A 264 --EKSQAFDKLIVAVGRRPV 281 (476)
T ss_dssp --EEEEEESEEEECSCEEEC
T ss_pred --cEEEECCEEEEeeCCccc
Confidence 167999999999997654
No 246
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.98 E-value=1.2e-05 Score=86.52 Aligned_cols=94 Identities=13% Similarity=0.137 Sum_probs=73.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
..|+|||||+.|+.+|..+++. |.+|+|+|+.+.+.... +
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~ll~~~------d---------------------------- 187 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYER------GLHPTLIHRSDKINKLM------D---------------------------- 187 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCEEEEEESSSCCSTTS------C----------------------------
T ss_pred cEEEEECCccchhhhHHHHHhc------CCcceeeeeeccccccc------c----------------------------
Confidence 4799999999999999999999 99999999987543200 0
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccccc
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~ 267 (631)
..+.+.+.+..++.||+++.+++|+++..+ .|.+.+
T Consensus 188 ------------------------~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~------~v~~~~-------------- 223 (437)
T 4eqs_A 188 ------------------------ADMNQPILDELDKREIPYRLNEEINAINGN------EITFKS-------------- 223 (437)
T ss_dssp ------------------------GGGGHHHHHHHHHTTCCEEESCCEEEEETT------EEEETT--------------
T ss_pred ------------------------chhHHHHHHHhhccceEEEeccEEEEecCC------eeeecC--------------
Confidence 112345677778899999999999887421 256665
Q ss_pred CceEEEcCEEEEecCCCCc
Q 006778 268 RGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.||.|.|..+.
T Consensus 224 -g~~~~~D~vl~a~G~~Pn 241 (437)
T 4eqs_A 224 -GKVEHYDMIIEGVGTHPN 241 (437)
T ss_dssp -SCEEECSEEEECCCEEES
T ss_pred -CeEEeeeeEEEEeceecC
Confidence 688999999999997653
No 247
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.97 E-value=1.7e-05 Score=86.46 Aligned_cols=104 Identities=17% Similarity=0.074 Sum_probs=78.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||||..|+.+|..|++. |.+|+|+|+.+.+... +
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~------G~~Vtlv~~~~~~l~~------~---------------------------- 224 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTL------GSRLDVVEMMDGLMQG------A---------------------------- 224 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHH------TCEEEEECSSSSSSTT------S----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCeEEEEEECCccccc------c----------------------------
Confidence 45799999999999999999999 9999999998754320 0
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
-..+.+.+.+.+++.||+++++++|.++..+++ . ..|.+.+. ++
T Consensus 225 ------------------------~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~-~-~~v~~~~~----~~------ 268 (482)
T 1ojt_A 225 ------------------------DRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKED-G-VYVTFEGA----NA------ 268 (482)
T ss_dssp ------------------------CHHHHHHHHHHHGGGEEEEECSCEEEEEEEETT-E-EEEEEESS----SC------
T ss_pred ------------------------CHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCC-e-EEEEEecc----CC------
Confidence 023455677788889999999999999987653 2 34555430 11
Q ss_pred cCceEEEcCEEEEecCCCCch
Q 006778 267 QRGVELRGRITLLAEGCRGSL 287 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~ 287 (631)
.|.++.+|.||+|+|..+..
T Consensus 269 -~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 269 -PKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp -CSSCEEESCEEECCCEEECG
T ss_pred -CceEEEcCEEEECcCCCcCC
Confidence 03568899999999988753
No 248
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.96 E-value=5.4e-06 Score=87.21 Aligned_cols=40 Identities=40% Similarity=0.614 Sum_probs=37.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccc
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHII 153 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~ 153 (631)
+||+|||||++||++|+.|++. |.+|+|+|+++.+|+.+.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~------g~~v~v~E~~~~~GG~~~ 41 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKL------NKKVLVIEKRNHIGGNAY 41 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGG------TCCEEEECSSSSSSGGGC
T ss_pred CCEEEECcCHHHHHHHHHHHhC------CCcEEEEecCCCCCcceE
Confidence 7999999999999999999999 999999999998988753
No 249
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.94 E-value=1.2e-05 Score=88.10 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=32.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
.+..|||||||+||+++|..|++. +++|+|||+.+.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~------~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTK------KYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTT------TCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhC------CCcEEEECCCCC
Confidence 356899999999999999999988 999999999863
No 250
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.91 E-value=7.9e-05 Score=75.87 Aligned_cols=108 Identities=19% Similarity=0.183 Sum_probs=77.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
...|+|||+|+.|+.+|..|++. |.+|+++++.+.+...
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~------g~~v~~~~~~~~~~~~----------------------------------- 192 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSY------STKVYLIHRRDTFKAQ----------------------------------- 192 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH------SSEEEEECSSSSCCSC-----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHh------CCeEEEEEeCCCCCcC-----------------------------------
Confidence 35799999999999999999999 9999999987643210
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHH-HhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKA-EELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a-~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (631)
.. +.+.+ ++.||++++++.++++..+ +.+.+|.+.+. .+|+
T Consensus 193 ----------------------------~~-~~~~~~~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~---~~g~---- 234 (323)
T 3f8d_A 193 ----------------------------PI-YVETVKKKPNVEFVLNSVVKEIKGD--KVVKQVVVENL---KTGE---- 234 (323)
T ss_dssp ----------------------------HH-HHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEET---TTCC----
T ss_pred ----------------------------HH-HHHHHHhCCCcEEEeCCEEEEEecc--CceeEEEEEEC---CCCc----
Confidence 01 22333 3459999999999999765 34556776541 2233
Q ss_pred ccCceEEEcCEEEEecCCCCchhHHHHHHcCCC
Q 006778 266 FQRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~ 298 (631)
..++.+|.||.|+|..+. ..+.+..++.
T Consensus 235 ---~~~~~~D~vv~a~G~~p~--~~~~~~~g~~ 262 (323)
T 3f8d_A 235 ---IKELNVNGVFIEIGFDPP--TDFAKSNGIE 262 (323)
T ss_dssp ---EEEEECSEEEECCCEECC--HHHHHHTTCC
T ss_pred ---eEEEEcCEEEEEECCCCC--hhHHhhcCee
Confidence 247999999999998774 3455555544
No 251
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.91 E-value=7.2e-06 Score=89.84 Aligned_cols=41 Identities=39% Similarity=0.579 Sum_probs=37.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCcc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~ 152 (631)
+.+||+|||||++||++|+.|++. |++|+|+|+++.+|+.+
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~------g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIH------GLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTT------SCEEEEECSSSSSCSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC------CCcEEEEEeCCCCCCce
Confidence 468999999999999999999999 99999999999998864
No 252
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.90 E-value=6.1e-05 Score=82.13 Aligned_cols=103 Identities=23% Similarity=0.255 Sum_probs=76.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
-.|+|||||..|+..|..|++. |.+|+++++...+.. +
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~l~~-------~----------------------------- 225 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGL------GYEPTVMVRSIVLRG-------F----------------------------- 225 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSCSSTT-------S-----------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHc------CCEEEEEeCCCCCcc-------c-----------------------------
Confidence 4799999999999999999999 999999997431110 0
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccccc
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~ 267 (631)
-..+.+.+.+.+++.||+|++++.+.++..++++.+ .|.+.+. .+|+
T Consensus 226 -----------------------d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~---~~~~------ 272 (483)
T 3dgh_A 226 -----------------------DQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNV---ETGE------ 272 (483)
T ss_dssp -----------------------CHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEET---TTCC------
T ss_pred -----------------------CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecC---CCCc------
Confidence 023456677888889999999999999987665554 4665541 1122
Q ss_pred CceEEEcCEEEEecCCCCc
Q 006778 268 RGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s~ 286 (631)
..++.+|.||+|+|..+.
T Consensus 273 -~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 273 -ESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp -EEEEEESEEEECSCEEEC
T ss_pred -eeEEEcCEEEECcccccC
Confidence 257999999999996653
No 253
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.90 E-value=5.3e-05 Score=81.76 Aligned_cols=107 Identities=22% Similarity=0.301 Sum_probs=80.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
.+|+|||+|..|+.+|..|++. |.+|+++|+.+.+....
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~~~~l~~~----------------------------------- 187 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQ------GKNVTMIVRGERVLRRS----------------------------------- 187 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSSSTTTTT-----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCeEEEEEcCCccchhh-----------------------------------
Confidence 4799999999999999999999 99999999987543210
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccccc
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~ 267 (631)
+ -..+.+.+.+.+++. |++++++.+.++..++ .+..|.+ +
T Consensus 188 ---------~-------------~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~--~v~~v~~-~-------------- 227 (449)
T 3kd9_A 188 ---------F-------------DKEVTDILEEKLKKH-VNLRLQEITMKIEGEE--RVEKVVT-D-------------- 227 (449)
T ss_dssp ---------S-------------CHHHHHHHHHHHTTT-SEEEESCCEEEEECSS--SCCEEEE-T--------------
T ss_pred ---------c-------------CHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC--cEEEEEe-C--------------
Confidence 0 023456677777778 9999999999987543 3433433 3
Q ss_pred CceEEEcCEEEEecCCCCchhHHHHHHcCCC
Q 006778 268 RGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (631)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~ 298 (631)
|.++.+|.||+|+|..+.. .+.+..|+.
T Consensus 228 -g~~i~~D~Vv~a~G~~p~~--~l~~~~gl~ 255 (449)
T 3kd9_A 228 -AGEYKAELVILATGIKPNI--ELAKQLGVR 255 (449)
T ss_dssp -TEEEECSEEEECSCEEECC--HHHHHTTCC
T ss_pred -CCEEECCEEEEeeCCccCH--HHHHhCCcc
Confidence 5789999999999988753 355666665
No 254
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.87 E-value=7.2e-05 Score=76.06 Aligned_cols=98 Identities=17% Similarity=0.185 Sum_probs=71.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
...|+|||+|+.|+.+|..|++. |.+|+++++.+.+.. +
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~--------~--------------------------- 181 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANI------CKKVYLIHRRDGFRC--------A--------------------------- 181 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTT------SSEEEEECSSSSCCS--------C---------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCEEEEEeeCCccCC--------C---------------------------
Confidence 35799999999999999999998 999999998764321 0
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHH-hcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAE-ELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~-~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (631)
..+.+.+. +.||++++++.++++..++ +.+.+|.+.+ ..+|+
T Consensus 182 -----------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~-~~v~~v~~~~---~~~g~---- 224 (311)
T 2q0l_A 182 -----------------------------PITLEHAKNNDKIEFLTPYVVEEIKGDA-SGVSSLSIKN---TATNE---- 224 (311)
T ss_dssp -----------------------------HHHHHHHHTCTTEEEETTEEEEEEEEET-TEEEEEEEEE---TTTCC----
T ss_pred -----------------------------HHHHHHHhhCCCeEEEeCCEEEEEECCC-CcEeEEEEEe---cCCCc----
Confidence 01223333 4699999999999998764 4455566542 01232
Q ss_pred ccCceEEEcCEEEEecCCCC
Q 006778 266 FQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s 285 (631)
..++.+|.||+|+|..+
T Consensus 225 ---~~~i~~D~vi~a~G~~p 241 (311)
T 2q0l_A 225 ---KRELVVPGFFIFVGYDV 241 (311)
T ss_dssp ---EEEEECSEEEECSCEEE
T ss_pred ---eEEEecCEEEEEecCcc
Confidence 14799999999999654
No 255
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.85 E-value=1.2e-05 Score=85.02 Aligned_cols=40 Identities=23% Similarity=0.424 Sum_probs=37.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCcc
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~ 152 (631)
++||+|||||++||++|..|++. |.+|+|+|+++.+|+++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~------g~~v~v~E~~~~~GG~~ 42 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK------GHQVHIIDQRDHIGGNS 42 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT------TCEEEEEESSSSSSGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHC------CCcEEEEEecCCcCCcc
Confidence 47999999999999999999998 99999999999998765
No 256
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.84 E-value=0.00011 Score=75.54 Aligned_cols=99 Identities=13% Similarity=0.190 Sum_probs=72.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||+|..|+.+|..|++. |.+|+++++.+.+..
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~------g~~V~lv~~~~~~~~------------------------------------ 196 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKY------GSKVYIIHRRDAFRA------------------------------------ 196 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT------SSEEEEECSSSSCCS------------------------------------
T ss_pred CCeEEEECCChHHHHHHHHHHhc------CCeEEEEecCCcCCc------------------------------------
Confidence 35799999999999999999998 999999998764311
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHH-HHHHhcCcEEecCceEEEEEEcCCC-cEEEEEeCCCccccCCCccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLG-GKAEELGVEIYPGFAASEILYDADN-KVIGIGTNDMGIAKDGSKKE 264 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~-~~a~~~Gv~i~~g~~v~~i~~~~~g-~v~gV~~~d~g~~~~G~~~~ 264 (631)
...+. +..++.||+++++++++++..++++ .+.+|.+.+ ..+|+
T Consensus 197 ----------------------------~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~---~~~g~--- 242 (333)
T 1vdc_A 197 ----------------------------SKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKN---VVTGD--- 242 (333)
T ss_dssp ----------------------------CHHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEE---TTTCC---
T ss_pred ----------------------------cHHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEe---cCCCc---
Confidence 00122 2235679999999999999876531 565566643 01232
Q ss_pred cccCceEEEcCEEEEecCCCC
Q 006778 265 NFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 265 ~f~~g~~i~a~~vV~A~G~~s 285 (631)
+.++.+|.||.|+|..+
T Consensus 243 ----~~~i~~D~vi~a~G~~p 259 (333)
T 1vdc_A 243 ----VSDLKVSGLFFAIGHEP 259 (333)
T ss_dssp ----EEEEECSEEEECSCEEE
T ss_pred ----eEEEecCEEEEEeCCcc
Confidence 26899999999999654
No 257
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.83 E-value=7.9e-05 Score=75.64 Aligned_cols=98 Identities=19% Similarity=0.225 Sum_probs=72.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
...|+|||+|+.|+.+|..|++. |.+|+++++.+.+...
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~------g~~v~~~~~~~~~~~~----------------------------------- 185 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANI------CSKIYLIHRRDEFRAA----------------------------------- 185 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTT------SSEEEEECSSSSCBSC-----------------------------------
T ss_pred cCEEEEECCCHHHHHHHHHHHhh------CCEEEEEEeCCCCCCC-----------------------------------
Confidence 35799999999999999999999 9999999987643110
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
...+.+..++.||++++++.+.++..++ +++.+|.+.. .+|+.
T Consensus 186 ----------------------------~~~~~~~~~~~gv~~~~~~~v~~i~~~~-~~~~~v~~~~----~~g~~---- 228 (315)
T 3r9u_A 186 ----------------------------PSTVEKVKKNEKIELITSASVDEVYGDK-MGVAGVKVKL----KDGSI---- 228 (315)
T ss_dssp ----------------------------HHHHHHHHHCTTEEEECSCEEEEEEEET-TEEEEEEEEC----TTSCE----
T ss_pred ----------------------------HHHHHHHHhcCCeEEEeCcEEEEEEcCC-CcEEEEEEEc----CCCCe----
Confidence 0112223356799999999999998765 5666676652 23331
Q ss_pred cCceEEEcCEEEEecCCCC
Q 006778 267 QRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s 285 (631)
.++.+|.||.|+|..+
T Consensus 229 ---~~~~~D~vv~a~G~~p 244 (315)
T 3r9u_A 229 ---RDLNVPGIFTFVGLNV 244 (315)
T ss_dssp ---EEECCSCEEECSCEEE
T ss_pred ---EEeecCeEEEEEcCCC
Confidence 4799999999999654
No 258
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.82 E-value=0.00012 Score=79.78 Aligned_cols=103 Identities=20% Similarity=0.178 Sum_probs=75.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
-.|+|||||..|+..|..|++. |.+|+++++...+.. +
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~l~~-------~----------------------------- 223 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGI------GLDTTVMMRSIPLRG-------F----------------------------- 223 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCSSTT-------S-----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHc------CCceEEEEcCccccc-------C-----------------------------
Confidence 4699999999999999999999 999999998532110 0
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccccc
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~ 267 (631)
-..+.+.+.+.+++.||++++++.+.++...+++.+ .|.+.+. .+|+
T Consensus 224 -----------------------d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~---~~g~------ 270 (488)
T 3dgz_A 224 -----------------------DQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDH---ASGK------ 270 (488)
T ss_dssp -----------------------CHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEET---TTTE------
T ss_pred -----------------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeC---CCCe------
Confidence 023456677788889999999999999987554544 3554430 1121
Q ss_pred CceEEEcCEEEEecCCCCc
Q 006778 268 RGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s~ 286 (631)
..++.+|.||.|+|..+.
T Consensus 271 -~~~~~~D~vi~a~G~~p~ 288 (488)
T 3dgz_A 271 -EDTGTFDTVLWAIGRVPE 288 (488)
T ss_dssp -EEEEEESEEEECSCEEES
T ss_pred -eEEEECCEEEEcccCCcc
Confidence 136899999999997654
No 259
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.80 E-value=0.0001 Score=75.51 Aligned_cols=96 Identities=21% Similarity=0.232 Sum_probs=70.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
-.|+|||+|..|+.+|..|++. |.+|+++++.+.+...
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~------g~~Vtlv~~~~~~~~~------------------------------------ 190 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKF------ADEVTVIHRRDTLRAN------------------------------------ 190 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT------CSEEEEECSSSSCCSC------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhc------CCEEEEEeCCCcCCcc------------------------------------
Confidence 5799999999999999999998 9999999987643210
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHH-hcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAE-ELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~-~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
..+.+.+. +.||+|+++++++++..+ +.+.+|.+.+ ..+|+
T Consensus 191 ----------------------------~~~~~~l~~~~gv~i~~~~~v~~i~~~--~~v~~v~~~~---~~~g~----- 232 (325)
T 2q7v_A 191 ----------------------------KVAQARAFANPKMKFIWDTAVEEIQGA--DSVSGVKLRN---LKTGE----- 232 (325)
T ss_dssp ----------------------------HHHHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEE---TTTCC-----
T ss_pred ----------------------------hHHHHHHHhcCCceEecCCceEEEccC--CcEEEEEEEE---CCCCc-----
Confidence 01223333 369999999999999764 4565677652 01232
Q ss_pred cCceEEEcCEEEEecCCCC
Q 006778 267 QRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s 285 (631)
..++.+|.||.|+|..+
T Consensus 233 --~~~i~~D~vi~a~G~~p 249 (325)
T 2q7v_A 233 --VSELATDGVFIFIGHVP 249 (325)
T ss_dssp --EEEEECSEEEECSCEEE
T ss_pred --EEEEEcCEEEEccCCCC
Confidence 24799999999999554
No 260
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.78 E-value=0.0001 Score=81.10 Aligned_cols=98 Identities=24% Similarity=0.274 Sum_probs=73.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-+|+|||+|..|+.+|..|++. |.+|+++++.+.+..
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~------g~~Vtlv~~~~~l~~------------------------------------ 392 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGI------VEHVTLLEFAPEMKA------------------------------------ 392 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHH------BSEEEEECSSSSCCS------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhh------CCEEEEEEeCcccCc------------------------------------
Confidence 35799999999999999999999 999999998764321
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHh-cCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~-~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (631)
...+.+.+++ .||++++++.++++..++ +++.+|.+.+. .+|+
T Consensus 393 ----------------------------~~~l~~~l~~~~gV~v~~~~~v~~i~~~~-~~v~~v~~~~~---~~g~---- 436 (521)
T 1hyu_A 393 ----------------------------DQVLQDKVRSLKNVDIILNAQTTEVKGDG-SKVVGLEYRDR---VSGD---- 436 (521)
T ss_dssp ----------------------------CHHHHHHHTTCTTEEEECSEEEEEEEECS-SSEEEEEEEET---TTCC----
T ss_pred ----------------------------CHHHHHHHhcCCCcEEEeCCEEEEEEcCC-CcEEEEEEEeC---CCCc----
Confidence 0123445555 599999999999997654 56767776541 2233
Q ss_pred ccCceEEEcCEEEEecCCCC
Q 006778 266 FQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s 285 (631)
..++.+|.||.|+|..+
T Consensus 437 ---~~~i~~D~vi~a~G~~p 453 (521)
T 1hyu_A 437 ---IHSVALAGIFVQIGLLP 453 (521)
T ss_dssp ---EEEEECSEEEECCCEEE
T ss_pred ---eEEEEcCEEEECcCCCC
Confidence 25789999999999543
No 261
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.78 E-value=1.8e-05 Score=86.36 Aligned_cols=42 Identities=36% Similarity=0.535 Sum_probs=38.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCC-CeEEEEeeCCCCCCccc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVD-LSVCVVEKGAEVGAHII 153 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G-~~V~vlEk~~~~g~~~~ 153 (631)
+.+||+|||||++||++|+.|++. | .+|+|+|+++.+|+.+.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~------g~~~v~v~E~~~~~GG~~~ 50 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTEL------GYKNWHLYECNDTPGGLSR 50 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHT------TCCSEEEEESSSSSSGGGC
T ss_pred cCCCEEEECcCHHHHHHHHHHHHc------CCCCEEEEeCCCCCCCeee
Confidence 468999999999999999999998 8 79999999999988664
No 262
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.78 E-value=5.9e-06 Score=87.49 Aligned_cols=86 Identities=19% Similarity=0.188 Sum_probs=67.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
.+|+|||||..|+.+|..|++. |.+|+|+|+.+.+.... +
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~------g~~Vtvv~~~~~~l~~~-----~----------------------------- 186 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDS------GTPASIGIILEYPLERQ-----L----------------------------- 186 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH------TCCEEEECSSSSSCTTT-----S-----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCeEEEEEcCCccchhh-----c-----------------------------
Confidence 4799999999999999999999 99999999987653210 0
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccccc
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~ 267 (631)
...+.+.+.+.+++.||+++.++.++++
T Consensus 187 -----------------------~~~~~~~~~~~l~~~gV~~~~~~~v~~i----------------------------- 214 (385)
T 3klj_A 187 -----------------------DRDGGLFLKDKLDRLGIKIYTNSNFEEM----------------------------- 214 (385)
T ss_dssp -----------------------CHHHHHHHHHHHHTTTCEEECSCCGGGC-----------------------------
T ss_pred -----------------------CHHHHHHHHHHHHhCCCEEEeCCEEEEc-----------------------------
Confidence 0234556777788899999999887544
Q ss_pred CceEEEcCEEEEecCCCCc
Q 006778 268 RGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s~ 286 (631)
|.++.+|.||.|+|..+.
T Consensus 215 -g~~~~~D~vv~a~G~~p~ 232 (385)
T 3klj_A 215 -GDLIRSSCVITAVGVKPN 232 (385)
T ss_dssp -HHHHHHSEEEECCCEEEC
T ss_pred -CeEEecCeEEECcCcccC
Confidence 145789999999997653
No 263
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.77 E-value=1.7e-05 Score=86.68 Aligned_cols=42 Identities=45% Similarity=0.510 Sum_probs=38.4
Q ss_pred CccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCcc
Q 006778 105 SMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (631)
Q Consensus 105 ~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~ 152 (631)
...+||+|||||++||++|+.|++. |.+|+|+|+++.+|+.+
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~------g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGA------GHQVTVLEASERPGGRV 72 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHH------TCEEEEECSSSSSBTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC------CCeEEEEECCCCCCCce
Confidence 3468999999999999999999999 99999999999888864
No 264
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.75 E-value=0.00012 Score=80.22 Aligned_cols=107 Identities=18% Similarity=0.257 Sum_probs=73.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccC--------CCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeee
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREK--------NVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRV 179 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~--------~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~ 179 (631)
..++|||||+.|+.+|..|++..... ....+|+|+|..+.+...
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~---------------------------- 269 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNM---------------------------- 269 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTT----------------------------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccC----------------------------
Confidence 46999999999999999887641110 013689999988764320
Q ss_pred eccCcceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccC
Q 006778 180 PVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKD 259 (631)
Q Consensus 180 ~~~~~~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~ 259 (631)
++ ..+.+.+.+.+++.||+|+++++|+++.. ++.+..+... |
T Consensus 270 -----------------~~-------------~~~~~~~~~~L~~~GV~v~~~~~v~~v~~--~~~~~~~~~~------d 311 (502)
T 4g6h_A 270 -----------------FE-------------KKLSSYAQSHLENTSIKVHLRTAVAKVEE--KQLLAKTKHE------D 311 (502)
T ss_dssp -----------------SC-------------HHHHHHHHHHHHHTTCEEETTEEEEEECS--SEEEEEEECT------T
T ss_pred -----------------CC-------------HHHHHHHHHHHHhcceeeecCceEEEEeC--CceEEEEEec------C
Confidence 00 24466677888899999999999998843 2333233333 3
Q ss_pred CCccccccCceEEEcCEEEEecCCCC
Q 006778 260 GSKKENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 260 G~~~~~f~~g~~i~a~~vV~A~G~~s 285 (631)
|+. .+.+|.+|.||.|+|..+
T Consensus 312 g~~-----~~~~i~ad~viwa~Gv~~ 332 (502)
T 4g6h_A 312 GKI-----TEETIPYGTLIWATGNKA 332 (502)
T ss_dssp SCE-----EEEEEECSEEEECCCEEC
T ss_pred ccc-----ceeeeccCEEEEccCCcC
Confidence 332 135799999999999765
No 265
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.75 E-value=0.0001 Score=76.89 Aligned_cols=105 Identities=16% Similarity=0.279 Sum_probs=71.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
..|+|||+|..|+.+|..|++. |.+|+++++.+.+... .+
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~------g~~V~lv~~~~~~~~~-----------------~~----------------- 206 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKN------GSDIALYTSTTGLNDP-----------------DA----------------- 206 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT------TCEEEEECC-------------------------------------------
T ss_pred CEEEEECCCcCHHHHHHHHHhc------CCeEEEEecCCCCCCC-----------------CC-----------------
Confidence 4799999999999999999999 9999999987643210 00
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcC-cEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELG-VEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~G-v~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
...+.++ ..+.+.+.+.+++.| |++++++.+.++..++ +. ..|.+.|
T Consensus 207 ----d~~~~~~-------------~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~-~~-~~v~~~~------------- 254 (369)
T 3d1c_A 207 ----DPSVRLS-------------PYTRQRLGNVIKQGARIEMNVHYTVKDIDFNN-GQ-YHISFDS------------- 254 (369)
T ss_dssp -----CTTSCC-------------HHHHHHHHHHHHTTCCEEEECSCCEEEEEEET-TE-EEEEESS-------------
T ss_pred ----CCCccCC-------------HHHHHHHHHHHhhCCcEEEecCcEEEEEEecC-Cc-eEEEecC-------------
Confidence 0000000 234556667777786 9999999999997654 32 3466655
Q ss_pred cCceEEE-cCEEEEecCCCCc
Q 006778 267 QRGVELR-GRITLLAEGCRGS 286 (631)
Q Consensus 267 ~~g~~i~-a~~vV~A~G~~s~ 286 (631)
|.++. +|.||.|+|..+.
T Consensus 255 --g~~~~~~d~vi~a~G~~~~ 273 (369)
T 3d1c_A 255 --GQSVHTPHEPILATGFDAT 273 (369)
T ss_dssp --SCCEEESSCCEECCCBCGG
T ss_pred --CeEeccCCceEEeeccCCc
Confidence 44554 6999999998764
No 266
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.70 E-value=0.00011 Score=75.33 Aligned_cols=97 Identities=15% Similarity=0.221 Sum_probs=71.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
...|+|||+|..|+.+|..|++. +.+|+++++.+.+...
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~------~~~v~~~~~~~~~~~~----------------------------------- 192 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPI------AKEVSIIHRRDKFRAH----------------------------------- 192 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTT------BSEEEEECSSSSCSSC-----------------------------------
T ss_pred CCEEEEECCCHhHHHHHHHHHhh------CCeEEEEEecCcCCcc-----------------------------------
Confidence 35799999999999999999998 9999999987653210
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
.. ..+.+++.||+++.++.+.++..+++ +.+|.+.+ ..+|+
T Consensus 193 -------------------------~~----~~~~l~~~gv~~~~~~~v~~i~~~~~--~~~v~~~~---~~~g~----- 233 (332)
T 3lzw_A 193 -------------------------EH----SVENLHASKVNVLTPFVPAELIGEDK--IEQLVLEE---VKGDR----- 233 (332)
T ss_dssp -------------------------HH----HHHHHHHSSCEEETTEEEEEEECSSS--CCEEEEEE---TTSCC-----
T ss_pred -------------------------HH----HHHHHhcCCeEEEeCceeeEEecCCc--eEEEEEEe---cCCCc-----
Confidence 00 12335678999999999999976553 34566654 12232
Q ss_pred cCceEEEcCEEEEecCCCC
Q 006778 267 QRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s 285 (631)
+.++.+|.||.|+|..+
T Consensus 234 --~~~~~~D~vv~a~G~~p 250 (332)
T 3lzw_A 234 --KEILEIDDLIVNYGFVS 250 (332)
T ss_dssp --EEEEECSEEEECCCEEC
T ss_pred --eEEEECCEEEEeeccCC
Confidence 47899999999999655
No 267
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.62 E-value=0.00028 Score=76.24 Aligned_cols=38 Identities=16% Similarity=0.323 Sum_probs=33.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV 148 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~ 148 (631)
...|+|||||..|+.+|..|++. .++.+|+++++++.+
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~----~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDS----YPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH----CTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhc----CCCCeEEEEEeCCCC
Confidence 46899999999999999999986 457899999998754
No 268
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.61 E-value=0.00041 Score=76.25 Aligned_cols=102 Identities=18% Similarity=0.206 Sum_probs=71.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
-.|+|||||..|+..|..|++. |.+|+++++.. +...
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~------G~~Vtlv~~~~-~l~~------------------------------------ 247 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGI------GLDVTVMVRSI-LLRG------------------------------------ 247 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEESSC-SSTT------------------------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHc------CCeEEEEeccc-cccc------------------------------------
Confidence 4699999999999999999999 99999999742 2110
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCC---CcEEEEEeCCCccccCCCccc
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDAD---NKVIGIGTNDMGIAKDGSKKE 264 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~---g~v~gV~~~d~g~~~~G~~~~ 264 (631)
+ -..+.+.+.+.+++.||+|++++.++++...++ +.+ .|.+.+ .+|+.
T Consensus 248 ---------~-------------d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~-~v~~~~----~~g~~-- 298 (519)
T 3qfa_A 248 ---------F-------------DQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRL-RVVAQS----TNSEE-- 298 (519)
T ss_dssp ---------S-------------CHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEE-EEEEEE----SSSSC--
T ss_pred ---------C-------------CHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceE-EEEEEE----CCCcE--
Confidence 0 023456677778889999999998888876442 333 233321 12211
Q ss_pred cccCceEEEcCEEEEecCCCC
Q 006778 265 NFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 265 ~f~~g~~i~a~~vV~A~G~~s 285 (631)
..++.+|.||.|+|..+
T Consensus 299 ----~~~~~~D~vi~a~G~~p 315 (519)
T 3qfa_A 299 ----IIEGEYNTVMLAIGRDA 315 (519)
T ss_dssp ----EEEEEESEEEECSCEEE
T ss_pred ----EEEEECCEEEEecCCcc
Confidence 14678999999999654
No 269
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.60 E-value=0.00028 Score=78.98 Aligned_cols=101 Identities=21% Similarity=0.179 Sum_probs=69.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
-.|+|||||..|+.+|..|++. |.+|+++++. .+... ++
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~------g~~Vtlv~~~-~~l~~------~d---------------------------- 325 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASL------GGDVTVMVRS-ILLRG------FD---------------------------- 325 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEESS-CSSTT------SC----------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHc------CCEEEEEECC-cCcCc------CC----------------------------
Confidence 3699999999999999999999 9999999986 22110 00
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEc-----CC---CcEE-EEEeCCCcccc
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYD-----AD---NKVI-GIGTNDMGIAK 258 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~-----~~---g~v~-gV~~~d~g~~~ 258 (631)
..+.+.+.+.+++.||++++++.++++... ++ +.+. .+...+
T Consensus 326 ------------------------~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~----- 376 (598)
T 2x8g_A 326 ------------------------QQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTD----- 376 (598)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETT-----
T ss_pred ------------------------HHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCC-----
Confidence 123445666777889999999988888542 11 3331 122223
Q ss_pred CCCccccccCceEEEcCEEEEecCCCCc
Q 006778 259 DGSKKENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 259 ~G~~~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
|+ ..++.+|.||.|+|..+.
T Consensus 377 -g~-------~~~~~~D~vi~a~G~~p~ 396 (598)
T 2x8g_A 377 -GK-------KFEEEFETVIFAVGREPQ 396 (598)
T ss_dssp -SC-------EEEEEESEEEECSCEEEC
T ss_pred -Cc-------EEeccCCEEEEEeCCccc
Confidence 21 123459999999997653
No 270
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.59 E-value=0.00027 Score=76.42 Aligned_cols=142 Identities=20% Similarity=0.214 Sum_probs=80.7
Q ss_pred cccEEEECCCHHHHHHHHHHH--------------------hhcccCCCCC-eEEEEeeCCCCCCccccccccChHhHHH
Q 006778 107 AYDVVIVGAGPAGLSAAIRLK--------------------QLCREKNVDL-SVCVVEKGAEVGAHIISGNVFEPRALNE 165 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La--------------------~~~~~~~~G~-~V~vlEk~~~~g~~~~~g~~i~~~~l~~ 165 (631)
.-.|+|||+|..|+-+|..|+ +. |. +|+|++++..+.. .+.+..+.+
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~------g~~~V~lv~r~~~~~~------~ft~~el~~ 212 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQS------RVKTVWIVGRRGPLQV------AFTIKELRE 212 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTC------CCCEEEEECSSCGGGC------CCCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhC------CCcEEEEEEcCChHhh------ccCHHHHHH
Confidence 357999999999999999998 44 77 7999998864321 222333333
Q ss_pred H--hhhhhhcCCCeeeeccCcceEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHh--------------cCcEE
Q 006778 166 L--LPQWKQEEAPIRVPVSSDKFWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEE--------------LGVEI 229 (631)
Q Consensus 166 l--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~--------------~Gv~i 229 (631)
+ ++.. ...+....+.. ....++. . . -.+..+.+.|.+.+++ .||++
T Consensus 213 l~~lp~~-------~~~~~~~~~~~----~~~~~~~----~-~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~ 274 (460)
T 1cjc_A 213 MIQLPGT-------RPMLDPADFLG----LQDRIKE----A-A--RPRKRLMELLLRTATEKPGVEEAARRASASRAWGL 274 (460)
T ss_dssp HHTCTTE-------EEECCGGGGTT----HHHHTTT----S-C--HHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEE
T ss_pred hhcCCCc-------eeEechhhhcc----hhhhhhh----c-c--HHHHHHHHHHHHHHHhccccccccCCCCCCceEEE
Confidence 2 1110 00000000000 0000000 0 0 0122345556666655 78999
Q ss_pred ecCceEEEEEEcCCC-cEEEEEeCCCcccc---------CCCccccccCceEEEcCEEEEecCCCC
Q 006778 230 YPGFAASEILYDADN-KVIGIGTNDMGIAK---------DGSKKENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 230 ~~g~~v~~i~~~~~g-~v~gV~~~d~g~~~---------~G~~~~~f~~g~~i~a~~vV~A~G~~s 285 (631)
++++.+++|..++++ ++.+|++.+..... +|+ +.++.+|.||.|.|.++
T Consensus 275 ~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~-------~~~i~~d~Vi~a~G~~p 333 (460)
T 1cjc_A 275 RFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGD-------VEDLPCGLVLSSIGYKS 333 (460)
T ss_dssp ECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEE-------EEEEECSEEEECCCEEC
T ss_pred ECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCc-------eEEEEcCEEEECCCCCC
Confidence 999999999876445 67667664311100 121 26899999999999654
No 271
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.57 E-value=4.4e-05 Score=82.94 Aligned_cols=40 Identities=33% Similarity=0.601 Sum_probs=36.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCCCCCCcc
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAEVGAHI 152 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~~~g~~~ 152 (631)
.+||+|||||++||++|+.|++. |+ +|+|+|+++.+|+.+
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~------g~~~v~~~e~~~~~gg~~ 44 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEA------GITDLLILEATDHIGGRM 44 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHT------TCCCEEEECSSSSSBTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhc------CCCceEEEeCCCCCCCce
Confidence 57999999999999999999999 98 899999998888764
No 272
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.57 E-value=0.0002 Score=77.62 Aligned_cols=103 Identities=22% Similarity=0.245 Sum_probs=73.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.-.|+|||||+.|+.+|..|++. |.+|+++++.+.+.... ++
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~------g~~Vtlv~~~~~~l~~~-----~d--------------------------- 213 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLM------GVQTHIIEMLDRALITL-----ED--------------------------- 213 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTTS-----CC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CCEEEEEEeCCcCCCCC-----CC---------------------------
Confidence 35799999999999999999999 99999999987543200 00
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
..+.+.+.+..+ |+++++++++++..++++.+ .|.+.+ .+|+
T Consensus 214 -------------------------~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v-~v~~~~----~~G~----- 255 (466)
T 3l8k_A 214 -------------------------QDIVNTLLSILK---LNIKFNSPVTEVKKIKDDEY-EVIYST----KDGS----- 255 (466)
T ss_dssp -------------------------HHHHHHHHHHHC---CCEECSCCEEEEEEEETTEE-EEEECC----TTSC-----
T ss_pred -------------------------HHHHHHHHhcCE---EEEEECCEEEEEEEcCCCcE-EEEEEe----cCCc-----
Confidence 122334444433 99999999999987652344 366552 1233
Q ss_pred cCceEEEcCEEEEecCCCCch
Q 006778 267 QRGVELRGRITLLAEGCRGSL 287 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~ 287 (631)
..++.+|.||+|+|..+..
T Consensus 256 --~~~i~~D~vi~a~G~~p~~ 274 (466)
T 3l8k_A 256 --KKSIFTNSVVLAAGRRPVI 274 (466)
T ss_dssp --CEEEEESCEEECCCEEECC
T ss_pred --eEEEEcCEEEECcCCCccc
Confidence 2489999999999987754
No 273
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.53 E-value=0.00016 Score=74.59 Aligned_cols=97 Identities=19% Similarity=0.265 Sum_probs=69.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
...|+|||+|..|+..|..|++. |.+|+++++.+.+...
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~------g~~V~l~~~~~~~~~~----------------------------------- 193 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRF------ARSVTLVHRRDEFRAS----------------------------------- 193 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTT------CSEEEEECSSSSCSSC-----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHh------CCeEEEEEcCCcCCcc-----------------------------------
Confidence 35799999999999999999998 9999999987643110
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHH-HHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLG-GKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKEN 265 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~-~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~ 265 (631)
+.+. +..++.||++++++.++++..++ .+.+|.+.+ ..+|+
T Consensus 194 -----------------------------~~~~~~~~~~~gV~v~~~~~v~~i~~~~--~~~~v~~~~---~~~g~---- 235 (335)
T 2a87_A 194 -----------------------------KIMLDRARNNDKIRFLTNHTVVAVDGDT--TVTGLRVRD---TNTGA---- 235 (335)
T ss_dssp -----------------------------TTHHHHHHHCTTEEEECSEEEEEEECSS--SCCEEEEEE---ETTSC----
T ss_pred -----------------------------HHHHHHHhccCCcEEEeCceeEEEecCC--cEeEEEEEE---cCCCc----
Confidence 0012 22245799999999999987654 333455542 01232
Q ss_pred ccCceEEEcCEEEEecCCCC
Q 006778 266 FQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 266 f~~g~~i~a~~vV~A~G~~s 285 (631)
+.++.+|.||.|+|..+
T Consensus 236 ---~~~i~~D~vi~a~G~~p 252 (335)
T 2a87_A 236 ---ETTLPVTGVFVAIGHEP 252 (335)
T ss_dssp ---CEEECCSCEEECSCEEE
T ss_pred ---eEEeecCEEEEccCCcc
Confidence 36899999999999543
No 274
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.45 E-value=0.00043 Score=82.32 Aligned_cols=117 Identities=16% Similarity=0.170 Sum_probs=76.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
-+|+|||||..|+-+|..|++. |. +|+|+++.+..-- +..
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~------G~~~Vtvv~r~~~~~~-----------------~~~---------------- 373 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRC------GARRVFLVFRKGFVNI-----------------RAV---------------- 373 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT------TCSEEEEECSSCGGGC-----------------CSC----------------
T ss_pred CcEEEECCChHHHHHHHHHHHc------CCCEEEEEEecChhhC-----------------CCC----------------
Confidence 3799999999999999999999 86 8999998752100 000
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
... .+.+++.||++++++.++++..+ +++|.+|++.++..+.+|.....-
T Consensus 374 ------------------------~~e-----~~~~~~~Gv~~~~~~~~~~i~~~-~g~v~~v~~~~~~~~~~g~~~~~~ 423 (1025)
T 1gte_A 374 ------------------------PEE-----VELAKEEKCEFLPFLSPRKVIVK-GGRIVAVQFVRTEQDETGKWNEDE 423 (1025)
T ss_dssp ------------------------HHH-----HHHHHHTTCEEECSEEEEEEEEE-TTEEEEEEEEEEEECTTSCEEEEE
T ss_pred ------------------------HHH-----HHHHHHcCCEEEeCCCceEEEcc-CCeEEEEEEEEeEEcCCCCcccCC
Confidence 001 13456689999999999999764 467777776533222334211000
Q ss_pred cCceEEEcCEEEEecCCCCchhHHHHHH
Q 006778 267 QRGVELRGRITLLAEGCRGSLSEKLIKN 294 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~~~~l~~~ 294 (631)
....++.||.||+|.|..+.. ..+...
T Consensus 424 g~~~~i~aD~Vi~A~G~~~~~-~~l~~~ 450 (1025)
T 1gte_A 424 DQIVHLKADVVISAFGSVLRD-PKVKEA 450 (1025)
T ss_dssp EEEEEEECSEEEECSCEECCC-HHHHHH
T ss_pred CceEEEECCEEEECCCCCCCc-hhhhhc
Confidence 002478999999999986532 234444
No 275
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.42 E-value=0.00017 Score=77.87 Aligned_cols=110 Identities=19% Similarity=0.235 Sum_probs=71.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcc
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDK 185 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~ 185 (631)
.-+|+|||||..|+-+|..+.+. |. +|+++++++....
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~------Ga~~Vtiv~r~~~~~~----------------------------------- 302 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQ------GATSVKCLYRRDRKNM----------------------------------- 302 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHT------TCSEEEEECSSCSTTC-----------------------------------
T ss_pred CCEEEEECCChhHHHHHHHHHHc------CCCEEEEEEeCCccCC-----------------------------------
Confidence 45799999999999999999998 87 5999998764310
Q ss_pred eEeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCc---cccCCCc
Q 006778 186 FWFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMG---IAKDGSK 262 (631)
Q Consensus 186 ~~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g---~~~~G~~ 262 (631)
|.. ... .+.+++.||++++++.++++.. +++|.+|++.++. .+.+|..
T Consensus 303 ------------p~~----------~~e-----~~~~~~~Gv~~~~~~~~~~i~~--~g~v~~v~~~~~~~~~~d~~G~~ 353 (456)
T 2vdc_G 303 ------------PGS----------QRE-----VAHAEEEGVEFIWQAAPEGFTG--DTVVTGVRAVRIHLGVADATGRQ 353 (456)
T ss_dssp ------------SSC----------HHH-----HHHHHHTTCEEECCSSSCCEEE--EEEEETTEEEEEEEEEEEECTTC
T ss_pred ------------CCC----------HHH-----HHHHHHCCCEEEeCCCceEEeC--CCcEEEEEEEEEEecccCCcCCc
Confidence 000 001 2345667999999999988874 2455444443211 1123332
Q ss_pred cccccCc--eEEEcCEEEEecCCCCc
Q 006778 263 KENFQRG--VELRGRITLLAEGCRGS 286 (631)
Q Consensus 263 ~~~f~~g--~~i~a~~vV~A~G~~s~ 286 (631)
.....+| .++.+|.||+|.|..+.
T Consensus 354 ~~~~~~g~~~~i~aD~Vi~A~G~~p~ 379 (456)
T 2vdc_G 354 TPQVIEGSEFTVQADLVIKALGFEPE 379 (456)
T ss_dssp CEEEEEEEEEEEECSEEEECSCEECC
T ss_pred cccccCCcEEEEECCEEEECCCCCCC
Confidence 1111123 57999999999997654
No 276
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.39 E-value=0.00083 Score=68.12 Aligned_cols=98 Identities=15% Similarity=0.140 Sum_probs=67.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
..|+|||||..|+.+|..|++. |.+|+|+|+.......
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~------G~~Vt~v~~~~~~~~~------------------------------------ 190 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKY------GSKVIILHRRDAFRAS------------------------------------ 190 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT------SSEEEEECSSSSCCSC------------------------------------
T ss_pred CeEEEECCChHHHHHHHHHHHh------CCeeeeeccccccccc------------------------------------
Confidence 5799999999999999999999 9999999986542110
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCcccccc
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQ 267 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~ 267 (631)
.....+.....+++.+....+.++...+ ....++...+. ..+
T Consensus 191 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~---~~~------- 232 (314)
T 4a5l_A 191 ---------------------------KTMQERVLNHPKIEVIWNSELVELEGDG-DLLNGAKIHNL---VSG------- 232 (314)
T ss_dssp ---------------------------HHHHHHHHTCTTEEEECSEEEEEEEESS-SSEEEEEEEET---TTC-------
T ss_pred ---------------------------chhhhhhhcccceeeEeeeeeEEEEeee-eccceeEEeec---ccc-------
Confidence 0111222334567777788888877655 33445554331 112
Q ss_pred CceEEEcCEEEEecCCCC
Q 006778 268 RGVELRGRITLLAEGCRG 285 (631)
Q Consensus 268 ~g~~i~a~~vV~A~G~~s 285 (631)
++.++.+|.||.|.|..+
T Consensus 233 ~~~~i~~d~vi~a~G~~p 250 (314)
T 4a5l_A 233 EYKVVPVAGLFYAIGHSP 250 (314)
T ss_dssp CEEEEECSEEEECSCEEE
T ss_pred cceeeccccceEeccccc
Confidence 257899999999999654
No 277
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.37 E-value=0.00012 Score=83.05 Aligned_cols=40 Identities=33% Similarity=0.580 Sum_probs=36.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH 151 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~ 151 (631)
..+||+|||||++||++|+.|++. |++|+|+|+.+.+|+.
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~------g~~v~~~e~~~~~gg~ 145 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSF------GMDVTLLEARDRVGGR 145 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHT------TCEEEEECSSSSSBTT
T ss_pred CCCeEEEECcCHHHHHHHHHHHHC------CCeEEEEecCCCCCCc
Confidence 358999999999999999999999 9999999999888764
No 278
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.35 E-value=0.00012 Score=81.23 Aligned_cols=70 Identities=14% Similarity=0.221 Sum_probs=47.7
Q ss_pred HHHHHHh-cCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEE-EcCEEEEecCCCCchhHHHHHHc
Q 006778 218 LGGKAEE-LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVEL-RGRITLLAEGCRGSLSEKLIKNF 295 (631)
Q Consensus 218 L~~~a~~-~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i-~a~~vV~A~G~~s~~~~~l~~~~ 295 (631)
+.+.+.+ .|++|+.++.|++|+.++ +++++|++.+. ++|+.. ..++ .+|.||+|+|+... .++....
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~~-~~~~gV~~~~~---~~g~~~-----~~~v~~~~~VIlaaG~~~s--p~lL~~s 269 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRNG-SQILGVQTNDP---TLGPNG-----FIPVTPKGRVILSAGAFGT--SRILFQS 269 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEET-TEEEEEEESCT---TSSGGG-----EEEEEEEEEEEECSHHHHH--HHHHHHT
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEeC-CEEEEEEEEec---CCCcee-----EEEEEeCCEEEEcCChhcC--HHHHHHc
Confidence 4455554 589999999999999875 67889988751 234320 0122 78999999998753 4555555
Q ss_pred CCC
Q 006778 296 KLR 298 (631)
Q Consensus 296 g~~ 298 (631)
|+.
T Consensus 270 Gig 272 (546)
T 1kdg_A 270 GIG 272 (546)
T ss_dssp TBS
T ss_pred CCC
Confidence 654
No 279
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.33 E-value=0.00052 Score=68.84 Aligned_cols=86 Identities=15% Similarity=0.059 Sum_probs=66.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
...|+|||+|+.|+.+|..|++. | +|+++++++..
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~------g-~v~~v~~~~~~-------------------------------------- 175 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDW------G-ETTFFTNGIVE-------------------------------------- 175 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGT------S-EEEEECTTTCC--------------------------------------
T ss_pred CCEEEEEecCccHHHHHHHhhhc------C-cEEEEECCCCC--------------------------------------
Confidence 45799999999999999999998 8 99999876420
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
+ .+.+.+.+++.||+++. +.+.++..++ .|.+.|
T Consensus 176 ----------~-----------------~~~~~~~l~~~gv~i~~-~~v~~i~~~~-----~v~~~~------------- 209 (297)
T 3fbs_A 176 ----------P-----------------DADQHALLAARGVRVET-TRIREIAGHA-----DVVLAD------------- 209 (297)
T ss_dssp ----------C-----------------CHHHHHHHHHTTCEEEC-SCEEEEETTE-----EEEETT-------------
T ss_pred ----------C-----------------CHHHHHHHHHCCcEEEc-ceeeeeecCC-----eEEeCC-------------
Confidence 0 11244566678999985 8888886432 467666
Q ss_pred cCceEEEcCEEEEecCCCC
Q 006778 267 QRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s 285 (631)
|.++.+|.||.|+|..+
T Consensus 210 --g~~~~~D~vi~a~G~~p 226 (297)
T 3fbs_A 210 --GRSIALAGLFTQPKLRI 226 (297)
T ss_dssp --SCEEEESEEEECCEEEC
T ss_pred --CCEEEEEEEEEccCccc
Confidence 67899999999999764
No 280
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.33 E-value=0.00035 Score=82.57 Aligned_cols=97 Identities=13% Similarity=0.200 Sum_probs=73.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcceE
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKFW 187 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 187 (631)
-.|+|||+|+.|+.+|..|++. |.+|+|+|+.+.+..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~------G~~Vtvv~~~~~~~~------------------------------------- 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAAT------GGVVAVIDARSSISA------------------------------------- 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGG------TCCSEEEESCSSCCH-------------------------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHc------CCcEEEEECCCccch-------------------------------------
Confidence 4799999999999999999999 999999998764310
Q ss_pred eeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCcccc---CCCccc
Q 006778 188 FLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAK---DGSKKE 264 (631)
Q Consensus 188 ~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~---~G~~~~ 264 (631)
. .+.+++.||+|++++.++++..++++++.+|++.+. +. +|+
T Consensus 322 -------------------------~-----~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~--~~~~~~G~--- 366 (965)
T 2gag_A 322 -------------------------A-----AAQAVADGVQVISGSVVVDTEADENGELSAIVVAEL--DEARELGG--- 366 (965)
T ss_dssp -------------------------H-----HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEE--CTTCCEEE---
T ss_pred -------------------------h-----HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEec--cccCCCCc---
Confidence 0 234567899999999999998742355666766531 00 121
Q ss_pred cccCceEEEcCEEEEecCCCCc
Q 006778 265 NFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 265 ~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
+.++.+|.||+|+|..+.
T Consensus 367 ----~~~i~~D~Vv~a~G~~P~ 384 (965)
T 2gag_A 367 ----TQRFEADVLAVAGGFNPV 384 (965)
T ss_dssp ----EEEEECSEEEEECCEEEC
T ss_pred ----eEEEEcCEEEECCCcCcC
Confidence 268999999999998775
No 281
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=97.32 E-value=0.00016 Score=53.81 Aligned_cols=57 Identities=11% Similarity=-0.011 Sum_probs=43.0
Q ss_pred ceEecCCCCcccccCCccccce-EEE-cCCCCeEEEEecCCccccccccccCCCCCccee
Q 006778 561 HLRLRDPKIPELVNLPEYAGPE-YVP-DEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 561 h~~~~~~~~~~~~~~~~~~~p~-~~~-~~~~~~~~~~~~~~c~~c~tC~i~~p~~~i~w~ 618 (631)
|+.+ |++.|..|..-+..||. +.. ++++...+.++.+.|..|+.|...||.+.|+|+
T Consensus 1 ~i~i-~~~~C~~C~~C~~~Cp~~~~~~~~~~~~~~~~~~~~c~~C~~C~~~CP~~Ai~~~ 59 (59)
T 1dwl_A 1 TIVI-DHEECIGCESCVELCPEVFAMIDGEEKAMVTAPDSTAECAQDAIDACPVEAISKE 59 (59)
T ss_dssp CEEE-SSCCCSSCCGGGGTSTTTEEEEECSSCEEESCTTCCCGGGGTGGGGSTTCCEEEC
T ss_pred CeEE-ChhhCcChhHHHHHCCHHheecCCCCcEEEecChhhhhHHHHHHHhCCHhhEEcC
Confidence 4566 77889888776889997 554 344432221589999999999999999999984
No 282
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.31 E-value=0.00017 Score=83.57 Aligned_cols=40 Identities=33% Similarity=0.580 Sum_probs=36.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCc
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAH 151 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~ 151 (631)
..+||+|||||++||++|+.|++. |++|+|+|+...+|+.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~------g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSF------GMDVTLLEARDRVGGR 316 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSSSSCTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC------CCcEEEEEecCcCCCc
Confidence 357999999999999999999999 9999999999888874
No 283
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.18 E-value=0.00089 Score=72.29 Aligned_cols=69 Identities=25% Similarity=0.214 Sum_probs=41.2
Q ss_pred HHHHHHHHHHh------cCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCC--ccccccCc--eEEEcCEEEEecCC
Q 006778 214 LVRWLGGKAEE------LGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGS--KKENFQRG--VELRGRITLLAEGC 283 (631)
Q Consensus 214 l~~~L~~~a~~------~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~--~~~~f~~g--~~i~a~~vV~A~G~ 283 (631)
+.+.|.+.+++ .|+++++++.++++..+ +.+.+|++.+...+.+|. ... -.+| .++.+|.||.|.|.
T Consensus 248 ~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~--~~v~~v~~~~~~~~~~~~~~~~~-~~~g~~~~i~~d~vi~a~G~ 324 (456)
T 1lqt_A 248 NIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK--RKVERIVLGRNELVSDGSGRVAA-KDTGEREELPAQLVVRSVGY 324 (456)
T ss_dssp HHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS--SSCCEEEEEEEEEEECSSSSEEE-EEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC--CcEeEEEEEEEEecCCCcccccc-cCCCceEEEEcCEEEEcccc
Confidence 34566666666 78999999999998754 445455554211000110 000 0013 57999999999996
Q ss_pred CC
Q 006778 284 RG 285 (631)
Q Consensus 284 ~s 285 (631)
.+
T Consensus 325 ~p 326 (456)
T 1lqt_A 325 RG 326 (456)
T ss_dssp EC
T ss_pred cc
Confidence 54
No 284
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.02 E-value=0.0026 Score=70.23 Aligned_cols=35 Identities=14% Similarity=0.259 Sum_probs=32.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
...|+|||+|..|+.+|..|++. +.+|+|+++.+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~------~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAET------AKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTT------BSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhh------CCEEEEEEcCCC
Confidence 45799999999999999999998 999999999885
No 285
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.00 E-value=0.0005 Score=75.31 Aligned_cols=61 Identities=25% Similarity=0.241 Sum_probs=43.9
Q ss_pred HHHHHHhcC-cEEecCceEEEEEEcCCC-cEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCc
Q 006778 218 LGGKAEELG-VEIYPGFAASEILYDADN-KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 218 L~~~a~~~G-v~i~~g~~v~~i~~~~~g-~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
+...+++.| ++|+.++.|++|+.++++ ++++|++.+ .+|... ...+++|+.||+|+|+...
T Consensus 227 ~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~----~~g~~~----~~~~v~A~~VIlaaG~~~s 289 (504)
T 1n4w_A 227 YLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKD----TDGKLL----ATKEISCRYLFLGAGSLGS 289 (504)
T ss_dssp HHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEEC----TTCCEE----EEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC----CCCccc----eeEEEeeCEEEEccCCCCC
Confidence 345555665 999999999999998644 788998753 223100 0157899999999998764
No 286
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.95 E-value=0.0007 Score=75.50 Aligned_cols=43 Identities=19% Similarity=0.241 Sum_probs=39.6
Q ss_pred cCccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCcc
Q 006778 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHI 152 (631)
Q Consensus 104 ~~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~ 152 (631)
+.++|||+|||+|..|...|..|++. |.+|++|||++..|+.+
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~------g~~vl~id~~~~~gg~~ 47 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRS------GQRVLHVDSRSYYGGNW 47 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSSSCGGG
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhC------CCEEEEEcCCCcccCcc
Confidence 45689999999999999999999999 99999999999998854
No 287
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.94 E-value=0.00037 Score=78.77 Aligned_cols=36 Identities=31% Similarity=0.575 Sum_probs=33.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCC--------CeEEEEeeCC-CC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVD--------LSVCVVEKGA-EV 148 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G--------~~V~vlEk~~-~~ 148 (631)
..+|+|||||++||++|+.|++. | ++|+|+|+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~------g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRL------AATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH------HTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHc------CcccccCCCceEEEEeccCccc
Confidence 46899999999999999999998 7 9999999998 88
No 288
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.94 E-value=0.0034 Score=69.19 Aligned_cols=35 Identities=17% Similarity=0.234 Sum_probs=32.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
...|+|||+|..|+.+|..|++. +.+|+|+++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~------~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPE------VEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT------CSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhh------CCEEEEEECCCC
Confidence 45799999999999999999998 999999999876
No 289
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.94 E-value=0.006 Score=61.79 Aligned_cols=35 Identities=17% Similarity=0.373 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV 148 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~ 148 (631)
-.|+|||||..|+.+|..|++. |.+|+|+|+.+.+
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~------g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKF------ADKVTIVHRRDEL 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT------CSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhc------CCEEEEEeccccc
Confidence 4799999999999999999999 9999999998754
No 290
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=96.89 E-value=0.00015 Score=57.77 Aligned_cols=66 Identities=17% Similarity=0.135 Sum_probs=48.2
Q ss_pred CceEecCCCCcccccCCccccce--EEEcC-CC--CeEE--EEecCCccccccccccCCCCCcceeCCCCCCCC
Q 006778 560 AHLRLRDPKIPELVNLPEYAGPE--YVPDE-KN--QLKL--QINAQNCLHCKACDIKDPKQNIKWTVPEGGGGP 626 (631)
Q Consensus 560 ~h~~~~~~~~~~~~~~~~~~~p~--~~~~~-~~--~~~~--~~~~~~c~~c~tC~i~~p~~~i~w~~p~gg~g~ 626 (631)
+|+.+ |.+.|..|..-+..||. +..++ ++ ...+ .++.+.|+.||.|...||.+.|+|+...|+.-.
T Consensus 1 ~~~~~-~~~~C~~Cg~C~~~CP~~a~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~CP~~ai~~~~~~~~~~~ 73 (80)
T 1jb0_C 1 AHTVK-IYDTCIGCTQCVRACPTDVLEMVPWDGCKAGQIASSPRTEDCVGCKRCETACPTDFLSIRVYLGAETT 73 (80)
T ss_dssp CCEEE-EETTCCCCCHHHHHCTTCCCEEEECSSSTTSEEEECTTGGGCCCCCHHHHHCCSSSCSEEEECCSCCT
T ss_pred CCCcc-cCCcCcChhHHHHHCCcccccccccccccccccccCCCCCcCcCcCChhhhCCCCccEeeeecchHHH
Confidence 47777 56889888766788996 32222 22 1122 357789999999999999999999999887643
No 291
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.88 E-value=0.00064 Score=74.46 Aligned_cols=61 Identities=11% Similarity=0.119 Sum_probs=43.6
Q ss_pred HHHHHHhc-CcEEecCceEEEEEEcCCC-cEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCc
Q 006778 218 LGGKAEEL-GVEIYPGFAASEILYDADN-KVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 218 L~~~a~~~-Gv~i~~g~~v~~i~~~~~g-~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
+...+++. +++|+.++.|++|+.++++ ++++|++.+ .+|... ...+++|+.||+|+|+...
T Consensus 232 ~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~----~~g~~~----~~~~~~A~~VIlaaGa~~s 294 (507)
T 1coy_A 232 YLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQID----EQGNVV----ATKVVTADRVFFAAGSVGT 294 (507)
T ss_dssp HHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEEC----TTSCEE----EEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC----CCCccc----ccEEEEeCEEEEccCccCC
Confidence 34445555 4999999999999998755 688998753 223200 0157899999999998764
No 292
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=96.69 E-value=0.0002 Score=60.22 Aligned_cols=60 Identities=20% Similarity=0.200 Sum_probs=45.0
Q ss_pred CceEecCCCCcccccCCccccce--EEEcC-CC-----CeEEEEecCCccccccccccCCCCCcceeCC
Q 006778 560 AHLRLRDPKIPELVNLPEYAGPE--YVPDE-KN-----QLKLQINAQNCLHCKACDIKDPKQNIKWTVP 620 (631)
Q Consensus 560 ~h~~~~~~~~~~~~~~~~~~~p~--~~~~~-~~-----~~~~~~~~~~c~~c~tC~i~~p~~~i~w~~p 620 (631)
.++.+ |.+.|..|..-+.+||. +..++ .+ .....++.+.|+.||.|...||.+.|+|+.|
T Consensus 36 ~~~~i-d~~~C~~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~CP~~Ai~~~~~ 103 (103)
T 1xer_A 36 TIVGV-DFDLCIADGSCINACPVNVFQWYDTPGHPASEKKADPVNEQACIFCMACVNVCPVAAIDVKPP 103 (103)
T ss_dssp SSEEE-ETTTCCCCCHHHHHCTTCCCEEEECTTCSSCSEEEECTTGGGCCCCCHHHHHCTTCCEEECCC
T ss_pred ceEEE-ehhhCCChhhHHHHcCccCeecccccCccccccceeecCcccccChhhHHHhccccceEecCC
Confidence 46766 77889988766789996 33221 11 1235678999999999999999999999876
No 293
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.67 E-value=0.0016 Score=74.58 Aligned_cols=35 Identities=23% Similarity=0.115 Sum_probs=31.8
Q ss_pred ccEEEEC--CCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCC
Q 006778 108 YDVVIVG--AGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (631)
Q Consensus 108 ~DVvIVG--gG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g 149 (631)
-.|+||| ||..|+.+|..|++. |.+|+|+++.+ +.
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~------G~~Vtlv~~~~-l~ 565 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATA------GHEVTIVSGVH-LA 565 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHT------TCEEEEEESSC-TT
T ss_pred CeEEEEcCCCCchHHHHHHHHHHc------CCEEEEEeccc-cc
Confidence 4799998 999999999999999 99999999987 43
No 294
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.66 E-value=0.0067 Score=66.99 Aligned_cols=35 Identities=17% Similarity=0.352 Sum_probs=32.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
...|+|||+|..|+.+|..|++. +.+|+|+++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~------~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQ------AEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH------BSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhh------CCEEEEEECCCC
Confidence 45799999999999999999999 999999999875
No 295
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=96.61 E-value=0.00056 Score=57.94 Aligned_cols=51 Identities=18% Similarity=0.188 Sum_probs=40.6
Q ss_pred CCCCccccc--CCccccce--EEEcCCCCeEEEEecCCccccccccccCCCCCcceeC
Q 006778 566 DPKIPELVN--LPEYAGPE--YVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWTV 619 (631)
Q Consensus 566 ~~~~~~~~~--~~~~~~p~--~~~~~~~~~~~~~~~~~c~~c~tC~i~~p~~~i~w~~ 619 (631)
|++.|..|. .-+.+||. +..+++ .+.||.+.|+.||.|...||++.|+|..
T Consensus 4 ~~~~C~~C~~~~C~~~CP~~ai~~~~~---~~~i~~~~C~~Cg~C~~~CP~~ai~~~~ 58 (106)
T 7fd1_A 4 VTDNCIKCKYTDCVEVCPVDCFYEGPN---FLVIHPDECIDCALCEPECPAQAIFSED 58 (106)
T ss_dssp ECGGGTTTCCCHHHHHCTTCCEEECSS---CEEECTTTCCCCCTTGGGCTTCCEEEGG
T ss_pred CccccCCccCcHHHHHcCccceEcCCC---cEEECcccCCChhhhHHhCCChhhhccc
Confidence 567788887 34778997 554433 4789999999999999999999998753
No 296
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.60 E-value=0.0044 Score=66.94 Aligned_cols=35 Identities=9% Similarity=0.031 Sum_probs=31.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
.-.|+|||+|.+|+-.|..|++. |.+|+++++++.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~------g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKY------GAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHT------TCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHh------CCeEEEEEECCC
Confidence 35799999999999999999999 999999998764
No 297
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=96.55 E-value=0.0045 Score=62.62 Aligned_cols=100 Identities=6% Similarity=0.104 Sum_probs=69.2
Q ss_pred ccEEEECCCH-HHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCCccccccccChHhHHHHhhhhhhcCCCeeeeccCcce
Q 006778 108 YDVVIVGAGP-AGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGAHIISGNVFEPRALNELLPQWKQEEAPIRVPVSSDKF 186 (631)
Q Consensus 108 ~DVvIVGgG~-aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~i~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 186 (631)
.+++|||||. +++.+|..+++. +.+|+++++...+.
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~------~~~v~i~~~~~~~~------------------------------------- 183 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNW------STDLVIATNGNELS------------------------------------- 183 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTT------CSCEEEECSSCCCC-------------------------------------
T ss_pred CceeeecCCCchhhhHHHHHHhC------CceEEEEeccccch-------------------------------------
Confidence 4678888775 568888888888 99999998754321
Q ss_pred EeeccCCcccCCCCCCCCCcEEEeHHHHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccc
Q 006778 187 WFLTKDRAFSLPSPFSNRGNYVISLSQLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENF 266 (631)
Q Consensus 187 ~~l~~~~~~~~p~~~~~~~~~~v~~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f 266 (631)
..+.+.+++.|+.++.+. +..+..++ +.+..|.+.+
T Consensus 184 -----------------------------~~~~~~l~~~g~~~~~~~-v~~~~~~~-~~~~~v~~~~------------- 219 (304)
T 4fk1_A 184 -----------------------------QTIMDELSNKNIPVITES-IRTLQGEG-GYLKKVEFHS------------- 219 (304)
T ss_dssp -----------------------------HHHHHHHHTTTCCEECSC-EEEEESGG-GCCCEEEETT-------------
T ss_pred -----------------------------hhhhhhhhccceeEeeee-EEEeecCC-Ceeeeeeccc-------------
Confidence 113345566788888664 66665443 5666788776
Q ss_pred cCceEEEcCEEEEecCCCCchhHHHHHHcCCC
Q 006778 267 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (631)
Q Consensus 267 ~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~ 298 (631)
|.++.++.+|++.|.+... .+.+..++.
T Consensus 220 --g~~i~~~~~vi~~g~~~~~--~~~~~~g~~ 247 (304)
T 4fk1_A 220 --GLRIERAGGFIVPTFFRPN--QFIEQLGCE 247 (304)
T ss_dssp --SCEECCCEEEECCEEECSS--CHHHHTTCC
T ss_pred --cceeeecceeeeeccccCC--hhhhhcCeE
Confidence 7889999988888876653 345566765
No 298
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.53 E-value=0.0031 Score=67.76 Aligned_cols=34 Identities=15% Similarity=0.194 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCe-EEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLS-VCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~-V~vlEk~~ 146 (631)
..+|+|||+|.+|+-.|..|++. +.+ |+++++++
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~------~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPV------AKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTT------SCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHH------hCCcEEEEeCCC
Confidence 35799999999999999999999 888 99999875
No 299
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.50 E-value=0.0082 Score=63.50 Aligned_cols=53 Identities=21% Similarity=0.292 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCc
Q 006778 213 QLVRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 213 ~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
.+.+.+.+.+++.||+++++++|+++..+ +|.+.| |.++.+|.||+|+|..+.
T Consensus 219 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~~------~v~~~~---------------g~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 219 NSRKAVASIYNQLGIKLVHNFKIKEIREH------EIVDEK---------------GNTIPADITILLPPYTGN 271 (409)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEECSS------EEEETT---------------SCEEECSEEEEECCEECC
T ss_pred HHHHHHHHHHHHCCCEEEcCCceEEECCC------eEEECC---------------CCEEeeeEEEECCCCCcc
Confidence 34566777788899999999999988532 266665 678999999999997653
No 300
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.49 E-value=0.0007 Score=62.36 Aligned_cols=53 Identities=19% Similarity=0.318 Sum_probs=43.2
Q ss_pred CCCCccccc-----CCccccce--EEEcCCCCeEEEEecCCccccccccccCCCCCccee
Q 006778 566 DPKIPELVN-----LPEYAGPE--YVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 566 ~~~~~~~~~-----~~~~~~p~--~~~~~~~~~~~~~~~~~c~~c~tC~i~~p~~~i~w~ 618 (631)
|++.|..|. .-+.+||. +..++++...+.|+.+.|+.||.|...||++.|++.
T Consensus 5 d~~~C~gC~~c~~~~C~~~CP~~ai~~~~~~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~ 64 (166)
T 3gyx_B 5 DPSKCDGCKGGEKTACMYICPNDLMILDPEEMKAFNQEPEACWECYSCIKICPQGAITAR 64 (166)
T ss_dssp CTTTCCCCCSSSCCHHHHHCTTSCEEEETTTTEEEESCGGGCCCCCHHHHHCSSCCEEEC
T ss_pred cchhcCCCCCCCcchhHHhCCccccEEecCCceeEecCcccCcccChHhHhCCccceEEe
Confidence 788899887 44789998 555555545677899999999999999999999754
No 301
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.40 E-value=0.0067 Score=68.74 Aligned_cols=52 Identities=17% Similarity=0.169 Sum_probs=36.3
Q ss_pred HHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCC
Q 006778 216 RWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 216 ~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s 285 (631)
..+.+.+++.||+++.+++++++. +++ + .+. .+ |+ ..++.+|.||.|+|..+
T Consensus 577 ~~~~~~l~~~GV~v~~~~~v~~i~--~~~-v-~~~-~~------G~-------~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 577 WIHRTTLLSRGVKMIPGVSYQKID--DDG-L-HVV-IN------GE-------TQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEEE--TTE-E-EEE-ET------TE-------EEEECCSEEEECCCEEE
T ss_pred HHHHHHHHhcCCEEEeCcEEEEEe--CCe-E-EEe-cC------Ce-------EEEEeCCEEEECCCccc
Confidence 345666778899999999999886 222 2 232 23 21 16799999999999543
No 302
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.29 E-value=0.0068 Score=64.65 Aligned_cols=54 Identities=20% Similarity=0.266 Sum_probs=38.8
Q ss_pred HHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCC
Q 006778 215 VRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 215 ~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s 285 (631)
.+.+.+.+++.||++++++.|+++..+ . |++.+ .+++ |.++.+|.||.|.|..+
T Consensus 203 ~~~l~~~l~~~GV~i~~~~~v~~v~~~---~---v~~~~----~~~~-------g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 203 KRLVEDLFAERNIDWIANVAVKAIEPD---K---VIYED----LNGN-------THEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEECSS---E---EEEEC----TTSC-------EEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEeCC---e---EEEEe----cCCC-------ceEEeeeEEEECCCCcc
Confidence 455677778899999999999988432 2 33332 1121 57899999999999765
No 303
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=96.19 E-value=0.0012 Score=59.69 Aligned_cols=53 Identities=19% Similarity=0.322 Sum_probs=42.5
Q ss_pred CCCCccccc-----CCccccce--EEEcCCCCeEEEEecCCccccccccccCCCCCccee
Q 006778 566 DPKIPELVN-----LPEYAGPE--YVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 566 ~~~~~~~~~-----~~~~~~p~--~~~~~~~~~~~~~~~~~c~~c~tC~i~~p~~~i~w~ 618 (631)
|.+.|..|. .-+.+||. +..++++...+.||.+.|+.||.|...||++.|++.
T Consensus 6 d~~~C~~C~~~~~~~C~~~CP~~ai~~~~~~~~~~~id~~~C~~Cg~Cv~~CP~~AI~~~ 65 (150)
T 1jnr_B 6 NPEKCDGCKALERTACEYICPNDLMTLDKEKMKAYNREPDMCWECYSCVKMCPQGAIDVR 65 (150)
T ss_dssp CTTTCCSCCSSSSCHHHHHCTTSCEEEETTTTEEEESCGGGCCCCCHHHHHCTTCCEEEC
T ss_pred CcccCCCCCCcccccchhhcCccCeEEecCCceeeeeCcccCcCHhHHHHhCCccceEec
Confidence 778899887 44789997 555544434578999999999999999999999764
No 304
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.15 E-value=0.0066 Score=62.25 Aligned_cols=33 Identities=15% Similarity=0.318 Sum_probs=29.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
.-.|+|||+|..|+.+|..|++. + +|+++++..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~------~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTV------A-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT------S-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhh------C-CEEEEECCC
Confidence 35799999999999999999998 7 699999874
No 305
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=96.11 E-value=0.0033 Score=45.93 Aligned_cols=48 Identities=19% Similarity=0.249 Sum_probs=37.6
Q ss_pred CCCcccccCCccccce--EEEcCCCCeEEEEecCCccccccccccCCCCCcce
Q 006778 567 PKIPELVNLPEYAGPE--YVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKW 617 (631)
Q Consensus 567 ~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~c~~c~tC~i~~p~~~i~w 617 (631)
.+.|..|..=...||. +..++ + .+.++.+.|+.||.|...||++.|++
T Consensus 5 ~~~C~~C~~C~~~CP~~ai~~~~-~--~~~~~~~~C~~C~~C~~~CP~~ai~~ 54 (55)
T 2fdn_A 5 NEACISCGACEPECPVNAISSGD-D--RYVIDADTCIDCGACAGVCPVDAPVQ 54 (55)
T ss_dssp CTTCCCCCTTGGGCTTCCEECCS-S--SCEECTTTCCCCCHHHHTCTTCCEEE
T ss_pred cccCcChhhHHHHCCccccCcCC-C--EEEeccccCcChhChHHHccccceec
Confidence 4667777666778997 54433 2 35789999999999999999999875
No 306
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.08 E-value=0.012 Score=62.82 Aligned_cols=59 Identities=17% Similarity=0.274 Sum_probs=38.7
Q ss_pred HHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCC
Q 006778 215 VRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 215 ~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s 285 (631)
.+.+.+.+++.||+++++++|+++..+ .+ .+...+ .+|+.. ++.++.+|.+|.|.|..+
T Consensus 211 ~~~~~~~l~~~gI~~~~~~~v~~v~~~---~v-~~~~~~----~~g~~~----~~~~i~~D~vv~~~g~~~ 269 (437)
T 3sx6_A 211 KGILTKGLKEEGIEAYTNCKVTKVEDN---KM-YVTQVD----EKGETI----KEMVLPVKFGMMIPAFKG 269 (437)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEETT---EE-EEEEEC----TTSCEE----EEEEEECSEEEEECCEEC
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEECC---eE-EEEecc----cCCccc----cceEEEEeEEEEcCCCcC
Confidence 445667778889999999999988532 22 122111 233211 146899999999999655
No 307
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=96.04 E-value=0.00094 Score=49.66 Aligned_cols=56 Identities=13% Similarity=0.108 Sum_probs=40.6
Q ss_pred ceEecCCCCcccccCCccccce-EEEcCCCCeEEEE-ecCCccccccccccCCCCCccee
Q 006778 561 HLRLRDPKIPELVNLPEYAGPE-YVPDEKNQLKLQI-NAQNCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 561 h~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~-~~~~c~~c~tC~i~~p~~~i~w~ 618 (631)
++.+ |++.|..|..=+..||. +..++++. ...+ +.+.|..|+.|...||.+.|+++
T Consensus 2 ~~~i-~~~~C~~C~~C~~~Cp~~~~~~~~~~-~~~~~~~~~c~~C~~C~~~CP~~Ai~~~ 59 (60)
T 1rof_A 2 KVRV-DADACIGCGVCENLCPDVFQLGDDGK-AKVLQPETDLPCAKDAADSCPTGAISVE 59 (60)
T ss_dssp CSEE-CTTTCCSCCSSTTTCTTTBCCCSSSC-CCBSCSSCCSTTHHHHHHHCTTCCEECC
T ss_pred EEEE-chhhCCCChHHHHhCcHHHeECCCCC-EeecCchhhHHHHHHHHHhCCHhHEEEe
Confidence 3555 77889888777889997 43333332 2233 37899999999999999999874
No 308
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=96.00 E-value=0.0029 Score=50.63 Aligned_cols=51 Identities=16% Similarity=0.137 Sum_probs=41.6
Q ss_pred cCCCCcccccCCccccce--EEEcCCCCeEEEEecCCccccc------cccccCCCCCccee
Q 006778 565 RDPKIPELVNLPEYAGPE--YVPDEKNQLKLQINAQNCLHCK------ACDIKDPKQNIKWT 618 (631)
Q Consensus 565 ~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~c~~c~------tC~i~~p~~~i~w~ 618 (631)
.|++.|..|..-+.+||. +..++. .+.|+.+.|+.|+ .|...||++.|+|.
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~~~---~~~i~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~ 61 (82)
T 3eun_A 3 MITDECINCDVCEPECPNGAISQGDE---TYVIEPSLCTECVGHYETSQCVEVCPVDAIIKD 61 (82)
T ss_dssp EECTTCCCCCTTGGGCTTCCEEECSS---SEEECGGGCCTTTTTCSSCHHHHHCTTCCEEEC
T ss_pred EeCCCCcCccchHHHCChhheEcCCC---ceEEchhhcCCCCCCCCccHHHHhCCccceEEc
Confidence 366889888766889997 544432 4789999999999 99999999999886
No 309
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=95.78 E-value=0.0042 Score=48.98 Aligned_cols=50 Identities=18% Similarity=0.175 Sum_probs=39.2
Q ss_pred CCCCccc--ccCCccccce--EEEcCCCCeEEEEecCCccccccccccCCCCCccee
Q 006778 566 DPKIPEL--VNLPEYAGPE--YVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 566 ~~~~~~~--~~~~~~~~p~--~~~~~~~~~~~~~~~~~c~~c~tC~i~~p~~~i~w~ 618 (631)
|++.|.. |..-+-+||. +..++ + .+.||.+.|+.||.|...||++.|++.
T Consensus 4 ~~~~C~~c~C~~C~~~Cp~~ai~~~~-~--~~~~~~~~C~~Cg~C~~~CP~~ai~~~ 57 (77)
T 1bc6_A 4 ITEPCIGTKDASCVEVCPVDCIHEGE-D--QYYIDPDVCIDCGACEAVCPVSAIYHE 57 (77)
T ss_dssp CCSTTTTCCCCSSTTTCTTCCEEECS-S--SEEECTTTCCSCCSHHHHSGGGSSEET
T ss_pred eCccCCCCCcchhHHhcccccEEeCC-C--cEEECcccCcCccCCHhhcCccceEec
Confidence 5677877 4444779998 54443 2 478899999999999999999999875
No 310
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.62 E-value=0.069 Score=58.11 Aligned_cols=37 Identities=11% Similarity=0.320 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
...|+|||+|-+|.-.|..|++. .++.+|+++-|++.
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~----~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKR----YPNSRTTLIMRDSA 282 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----STTCEEEEECSSSS
T ss_pred CcEEEEECCcHHHHHHHHHHHhc----CCCceEEEEeCCCc
Confidence 34799999999999999999875 23789999998764
No 311
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=95.59 E-value=0.0036 Score=52.67 Aligned_cols=50 Identities=20% Similarity=0.264 Sum_probs=38.4
Q ss_pred CCCCcccc--cCCccccce--EEEcCCCCeEEEEecCCccccccccccCCCCCccee
Q 006778 566 DPKIPELV--NLPEYAGPE--YVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 566 ~~~~~~~~--~~~~~~~p~--~~~~~~~~~~~~~~~~~c~~c~tC~i~~p~~~i~w~ 618 (631)
|++.|..| ..-+-.||. +..++. ...||.+.|+.||.|...||++.|++.
T Consensus 4 ~~~~C~~C~c~~C~~~CP~~ai~~~~~---~~~~~~~~C~~Cg~C~~~CP~~Ai~~~ 57 (105)
T 2v2k_A 4 IAEPCVDVKDKACIEECPVDCIYEGAR---MLYIHPDECVDCGACEPVCPVEAIYYE 57 (105)
T ss_dssp ECGGGTTTCCCHHHHHCTTCCEEECSS---CEEECTTTCCCCCCSGGGCTTCCEEEG
T ss_pred ecccCCCCCcChhhhhcCccccCcCCC---cEEEeCCcCcchhhHHHhCCccCEEec
Confidence 45667766 333678997 544432 478899999999999999999999875
No 312
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=95.43 E-value=0.0096 Score=47.45 Aligned_cols=52 Identities=17% Similarity=0.188 Sum_probs=41.9
Q ss_pred cCCCCcccccCCccccce--EEEcCCCCeEEEEecCCccccc------cccccCCCCCcceeC
Q 006778 565 RDPKIPELVNLPEYAGPE--YVPDEKNQLKLQINAQNCLHCK------ACDIKDPKQNIKWTV 619 (631)
Q Consensus 565 ~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~c~~c~------tC~i~~p~~~i~w~~ 619 (631)
.+.+.|..|..-+-+||. +..++. .+.||.+.|..|+ .|.-.||++.|++..
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~~~---~~~~~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~~ 62 (82)
T 2fgo_A 3 KITDDCINCDVCEPECPNGAISQGEE---IYVIDPNLCTECVGHYDEPQCQQVCPVDCIPLDD 62 (82)
T ss_dssp CCCTTCCCCCTTGGGCTTCCEEECSS---SEEECTTTCCTTTTTCSSCHHHHHCTTCCCCBCT
T ss_pred eeCCCCCChhhHHHHCChhccCCCCC---eEEEEchhCccCCCcCCCCHhHhhCCcccEEccC
Confidence 467888888777889996 544432 4788999999999 999999999998853
No 313
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=95.37 E-value=0.006 Score=57.67 Aligned_cols=61 Identities=15% Similarity=0.216 Sum_probs=46.1
Q ss_pred CCCceEe-cCCCCcccccCC--ccccce--EEEcCCCCeEEEEecCCccccccccccCCCCCcceeCC
Q 006778 558 QPAHLRL-RDPKIPELVNLP--EYAGPE--YVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWTVP 620 (631)
Q Consensus 558 ~~~h~~~-~~~~~~~~~~~~--~~~~p~--~~~~~~~~~~~~~~~~~c~~c~tC~i~~p~~~i~w~~p 620 (631)
+.+++.+ .+++.|..|..+ +.+||. +..++++ .+.||.+.|+.||.|...||++.|.|...
T Consensus 45 ~~~~~~~~~~~~~C~~C~~p~C~~~CP~gAi~~~~~g--~~~id~~~CigC~~C~~~CP~~Ai~~~~~ 110 (195)
T 2vpz_B 45 EYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTKDG--LVLVDPKKCIACGACIAACPYDARYLHPA 110 (195)
T ss_dssp CTTSCEEEEEEEECCCCSSCTTTTTCSSSCEEECTTS--CEEECTTTCCCCCHHHHHCTTCCCEECTT
T ss_pred CCCceeEEECcccCcCccCcHHHHhcCCCceeccccc--ceeecCCCCCCcChhHhhCCCCCeEECCC
Confidence 3345443 256778888743 789998 5555444 58899999999999999999999998754
No 314
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=95.26 E-value=0.0036 Score=49.52 Aligned_cols=50 Identities=16% Similarity=0.103 Sum_probs=37.7
Q ss_pred CCCCccc--ccCCccccce--EEEcCCCCeEEEEecCCccccccccccCCCCCccee
Q 006778 566 DPKIPEL--VNLPEYAGPE--YVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 566 ~~~~~~~--~~~~~~~~p~--~~~~~~~~~~~~~~~~~c~~c~tC~i~~p~~~i~w~ 618 (631)
|++.|.. |..-+-.||. +..++ + .+.||.+.|+.||.|...||++.|++.
T Consensus 4 ~~~~C~~c~C~~C~~~CP~~ai~~~~-~--~~~~~~~~C~~C~~C~~~CP~~Ai~~~ 57 (78)
T 1h98_A 4 ICEPCIGVKDQSCVEVCPVECIYDGG-D--QFYIHPEECIDCGACVPACPVNAIYPE 57 (78)
T ss_dssp ECGGGTTTCCCHHHHHCTTCCEEECS-S--SEEECTTTCCCCCTHHHHCTTCCEEEG
T ss_pred EchhCCCCCcChhhhhcCccceEcCC-C--EEEECcccCCcHhHHHHhCCccceEec
Confidence 4566776 4333678996 55443 2 478899999999999999999999864
No 315
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=95.00 E-value=0.01 Score=47.00 Aligned_cols=51 Identities=16% Similarity=0.210 Sum_probs=40.8
Q ss_pred cCCCCcccccCCccccce--EEEcCCCCeEEEEecCCccccc------cccccCCCCCccee
Q 006778 565 RDPKIPELVNLPEYAGPE--YVPDEKNQLKLQINAQNCLHCK------ACDIKDPKQNIKWT 618 (631)
Q Consensus 565 ~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~c~~c~------tC~i~~p~~~i~w~ 618 (631)
.+++.|..|..-+-+||. +..+++ .+.||.+.|..|+ .|.-.||++.|++.
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~~~---~~~~~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~ 61 (80)
T 1rgv_A 3 YINDDCTACDACVEECPNEAITPGDP---IYVIDPTKCSECVGAFDEPQCRLVCPADCIPDN 61 (80)
T ss_dssp CCCSCCCCCCTTTTTCTTCCEECCSS---SCEECTTTCCTTTTTCSSCHHHHHCSSCCCCBC
T ss_pred EeCCCCcChhhHHHHcChhccCcCCC---eeEEcchhCcCCCCcCCccHHHHhcCcccEEec
Confidence 466788888766789996 544332 3678999999999 99999999999875
No 316
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=94.83 E-value=0.0054 Score=46.24 Aligned_cols=55 Identities=13% Similarity=0.108 Sum_probs=40.3
Q ss_pred eEecCCCCcccccCCccccce-EEEcCC-CCeEEEEe--cCCccccccccccCCCCCccee
Q 006778 562 LRLRDPKIPELVNLPEYAGPE-YVPDEK-NQLKLQIN--AQNCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~p~-~~~~~~-~~~~~~~~--~~~c~~c~tC~i~~p~~~i~w~ 618 (631)
+.+ |++.|..|..-+..||. +..+++ +. ...++ .+.|..|+.|.-.||++.|++.
T Consensus 4 ~~i-d~~~C~~Cg~C~~~CP~~~~~~~~~~~-~~~~~~~~~~C~~C~~C~~~CP~~Ai~~~ 62 (64)
T 1dax_A 4 FYV-DQDECIACESCVEIAPGAFAMDPEIEK-AYVKDVEGASQEEVEEAMDTCPVQCIHWE 62 (64)
T ss_dssp CEE-CSTTCCSCCHHHHHCTTTEEECSSSSS-EEECCGGGSCHHHHHHHHHHSSSCCEECC
T ss_pred EEE-ccccCCCchHHHHhCCccEeEcCCCCE-EEEecCCCcchhHHHHHHHhCCHhhEeee
Confidence 344 67888887766778997 555543 33 23334 7899999999999999999874
No 317
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=94.56 E-value=0.0088 Score=55.59 Aligned_cols=54 Identities=22% Similarity=0.265 Sum_probs=40.0
Q ss_pred CCCCcccccCCccccce--E--EEcCC-----------CCeEEEEecCCccccccccccCCCCCcceeC
Q 006778 566 DPKIPELVNLPEYAGPE--Y--VPDEK-----------NQLKLQINAQNCLHCKACDIKDPKQNIKWTV 619 (631)
Q Consensus 566 ~~~~~~~~~~~~~~~p~--~--~~~~~-----------~~~~~~~~~~~c~~c~tC~i~~p~~~i~w~~ 619 (631)
|.+.|..|..-+.+||. . ...+. ....+.++.+.|+.||.|...||++.|.+..
T Consensus 49 d~~~Ci~C~~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~~CP~~Ai~~~~ 117 (182)
T 3i9v_9 49 GLEKCIGCSLCAAACPAYAIYVEPAENDPENPVSAGERYAKVYEINMLRCIFCGLCEEACPTGAIVLGY 117 (182)
T ss_dssp SCBSCCCCCHHHHHCTTCCEEEEEECCCSSSCSSSSSCEEEEEEEETTTCCCCCHHHHHCSSSCEEECS
T ss_pred CCccCcccccchhhCCcccEEeecccccccccccccccccceeecCCCcCcChhChhhhCCccceEecC
Confidence 46789888766788997 2 22111 0124678999999999999999999998763
No 318
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=94.50 E-value=0.0078 Score=44.30 Aligned_cols=51 Identities=10% Similarity=-0.003 Sum_probs=38.7
Q ss_pred CCCCcccccCCccccce-EEEcCCCCeEEEEe--cCCccccccccccCCCCCccee
Q 006778 566 DPKIPELVNLPEYAGPE-YVPDEKNQLKLQIN--AQNCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 566 ~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~--~~~c~~c~tC~i~~p~~~i~w~ 618 (631)
| +.|..|..-+-.||. +..++++. .+.++ .+.|..|+.|.-.||.+.|+++
T Consensus 5 d-~~C~~C~~C~~~CP~~~~~~~~~~-~~~~~~~~~~C~~C~~C~~~CP~~Ai~~~ 58 (58)
T 1f2g_A 5 N-DDCMACEACVEICPDVFEMNEEGD-KAVVINPDSDLDCVEEAIDSCPAEAIVRS 58 (58)
T ss_dssp T-TTCCCCCHHHHHCTTTEEECSSSS-SEEESCTTCCSTHHHHHHHTCSSCCCBCC
T ss_pred C-CcCccchHHHHhCCccEEECCCCc-EEEeCCCccchHHHHHHHhhCChhhEEeC
Confidence 5 778877655678998 54444332 36778 8899999999999999999863
No 319
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.35 E-value=0.043 Score=49.40 Aligned_cols=35 Identities=31% Similarity=0.274 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
...|+|+|+|..|..+|..|++. |.+|+++++.+.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~------g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSS------GHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHH
Confidence 45799999999999999999998 999999998753
No 320
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=94.16 E-value=0.027 Score=56.06 Aligned_cols=54 Identities=15% Similarity=0.057 Sum_probs=42.4
Q ss_pred CCCCcccccCC--ccccce-EEEcCCCCeEEEEecCCccccccccccCCCCCcceeCCC
Q 006778 566 DPKIPELVNLP--EYAGPE-YVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWTVPE 621 (631)
Q Consensus 566 ~~~~~~~~~~~--~~~~p~-~~~~~~~~~~~~~~~~~c~~c~tC~i~~p~~~i~w~~p~ 621 (631)
.+..|..|..+ +.+||. ...++++ .+.||.+.|+.|+.|...||++.|.|....
T Consensus 64 ~~~~C~~C~~p~C~~~CP~Ai~~~~~g--~v~id~~~CigC~~C~~~CP~~Ai~~~~~~ 120 (274)
T 1ti6_B 64 RPTPCMHCENAPCVAKGNGAVYQREDG--IVLIDPEKAKGKKELLDTCPYGVMYWNEEE 120 (274)
T ss_dssp EEECCCCCTTCHHHHHTTTSEEECTTS--CEEECTTTTTTCGGGGGGCSSCCCEEETTT
T ss_pred cCCcCCCCCChHHHhhChHHhhhccCC--cEEechhhccchHHHHhhCccCCeEEEccc
Confidence 45778888764 678997 4334444 578999999999999999999999998543
No 321
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=93.78 E-value=0.014 Score=46.41 Aligned_cols=59 Identities=15% Similarity=-0.002 Sum_probs=42.5
Q ss_pred eEecCCCCcccccCCccccce-EEEcCCCCeEEE---------EecCCccccccccccCCCCCcceeCCC
Q 006778 562 LRLRDPKIPELVNLPEYAGPE-YVPDEKNQLKLQ---------INAQNCLHCKACDIKDPKQNIKWTVPE 621 (631)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~---------~~~~~c~~c~tC~i~~p~~~i~w~~p~ 621 (631)
+.| |++.|..|..-+-.||. +..++++...+. ++.+.|..|+.|.-.||.+.|+|.-.+
T Consensus 4 v~v-d~~~CigCg~C~~~CP~~~~~~~~g~~~~~~~~~~~~~~~~~~~c~~C~~C~~~CP~~AI~~~~~~ 72 (81)
T 1iqz_A 4 TIV-DKETCIACGACGAAAPDIYDYDEDGIAYVTLDDNQGIVEVPDILIDDMMDAFEGCPTDSIKVADEP 72 (81)
T ss_dssp EEE-CTTTCCCCSHHHHHCTTTEEECTTSCEEETTTTTSSCSCCCGGGHHHHHHHHHHCTTCCEEEESSC
T ss_pred EEE-ecccCcccChhhHhCchheeeCCCCeEEEeccCccccCCCCHHHHHHHHHHHHhCCHhHEEEecCC
Confidence 444 78899988766788997 655544432211 224679999999999999999987544
No 322
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.76 E-value=0.062 Score=47.43 Aligned_cols=36 Identities=22% Similarity=0.383 Sum_probs=32.3
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
+.-.|+|+|+|..|...|..|.+. |++|+++|+.+.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~------g~~v~vid~~~~ 41 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLAS------DIPLVVIETSRT 41 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHT------TCCEEEEESCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCHH
Confidence 345799999999999999999998 999999998753
No 323
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=93.74 E-value=0.01 Score=63.15 Aligned_cols=54 Identities=15% Similarity=0.208 Sum_probs=41.2
Q ss_pred ceEecCCCCcccccCCccccce--EEEcCCCCeEEEE-ecCCccccccccccCCCCCcce
Q 006778 561 HLRLRDPKIPELVNLPEYAGPE--YVPDEKNQLKLQI-NAQNCLHCKACDIKDPKQNIKW 617 (631)
Q Consensus 561 h~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~-~~~~c~~c~tC~i~~p~~~i~w 617 (631)
.+. .|++.|..|..-+-+||. +..+ ++. ...| +.+.|+.||.|...||++.|.+
T Consensus 27 ~i~-~d~~kCi~Cg~C~~~CP~~ai~~~-~~~-~~~i~~~~~C~~Cg~C~~~CP~~Ai~~ 83 (421)
T 1hfe_L 27 FVQ-IDEAKCIGCDTCSQYCPTAAIFGE-MGE-PHSIPHIEACINCGQCLTHCPENAIYE 83 (421)
T ss_dssp SEE-ECTTTCCCCCHHHHHCTTCCCBCC-TTS-CCBCCCGGGCCCCCTTGGGCTTCCEEE
T ss_pred eEE-ECcccCCCccHHHHhcCcCceecc-ccc-ceeecChhhCCchhhHHHhhCcCCccc
Confidence 444 488999998776789997 3322 222 2345 8999999999999999999987
No 324
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=93.48 E-value=0.33 Score=53.25 Aligned_cols=35 Identities=14% Similarity=0.376 Sum_probs=31.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
...|+|||+|..|+-.|..|++. +.+|+++++.+.
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~------~~~vtv~~r~~~ 220 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQ------AAELFVFQRTPH 220 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH------BSEEEEEESSCC
T ss_pred CCEEEEECCCccHHHHHHHHhhc------CceEEEEEcCCc
Confidence 45799999999999999999999 999999998764
No 325
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.33 E-value=0.17 Score=45.13 Aligned_cols=33 Identities=15% Similarity=0.260 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|+|+|+|..|...|..|.+. |.+|+++|+.+
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~------g~~V~vid~~~ 36 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR------GQNVTVISNLP 36 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCCEEEEECCC
Confidence 4699999999999999999998 99999999863
No 326
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=93.23 E-value=0.037 Score=55.72 Aligned_cols=52 Identities=15% Similarity=0.191 Sum_probs=41.7
Q ss_pred CCCCcccccCC--ccccce---EEEcCCCCeEEEEecCCccccccccccCCCCCcceeC
Q 006778 566 DPKIPELVNLP--EYAGPE---YVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWTV 619 (631)
Q Consensus 566 ~~~~~~~~~~~--~~~~p~---~~~~~~~~~~~~~~~~~c~~c~tC~i~~p~~~i~w~~ 619 (631)
+++.|..|..+ +.+||. +..++++ .+.||.+.|+.||.|...||++.|.+..
T Consensus 96 ~~~~C~~C~~~~C~~~CP~~gAi~~~~~g--~v~id~~~CigCg~C~~~CP~~ai~~~~ 152 (294)
T 1kqf_B 96 RKDGCMHCEDPGCLKACPSAGAIIQYANG--IVDFQSENCIGCGYCIAGCPFNIPRLNK 152 (294)
T ss_dssp EEESCCCBSSCHHHHHCCSTTSEEEETTS--CEEECGGGCCCCCHHHHHCTTCCCEEET
T ss_pred CcccCCCcCChhhhhhCCccCcccccccc--ceEeCcccCCCcchhhhcCCCCCcEecC
Confidence 46778888754 778985 5444454 5789999999999999999999998864
No 327
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=93.10 E-value=0.022 Score=45.72 Aligned_cols=50 Identities=20% Similarity=0.261 Sum_probs=39.8
Q ss_pred CCCCcccccCCccccce--EEEcCCCCeEEEEecCCccccc------cccccCCC-CCccee
Q 006778 566 DPKIPELVNLPEYAGPE--YVPDEKNQLKLQINAQNCLHCK------ACDIKDPK-QNIKWT 618 (631)
Q Consensus 566 ~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~c~~c~------tC~i~~p~-~~i~w~ 618 (631)
+.+.|..|..-+-+||. ...++. ...|+.+.|+.|| .|.-.||+ +.|++.
T Consensus 4 ~~~~C~~C~~C~~~CP~~ai~~~~~---~~~~~~~~C~~C~~~~~~~~C~~~CP~~~Ai~~~ 62 (85)
T 2zvs_A 4 ITKKCINCDMCEPECPNEAISMGDH---IYEINSDKCTECVGHYETPTCQKVCPIPNTIVKD 62 (85)
T ss_dssp ECTTCCCCCTTTTTCTTCCEECCSS---SCEECGGGCCTTTTTCSSCHHHHHCSSCCEEECT
T ss_pred eCCcCcChhHHHHHCchhccCcCCC---ceEEeChhccCCCCcCCccHhhHhCcCCCCEEec
Confidence 56788888766789996 444332 4678999999999 99999999 999874
No 328
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.86 E-value=0.11 Score=45.26 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|+|+|+|..|...|..|++. |.+|+++|+.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~------g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK------GHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCH
Confidence 4699999999999999999998 99999999864
No 329
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=92.81 E-value=0.15 Score=54.18 Aligned_cols=55 Identities=20% Similarity=0.250 Sum_probs=39.4
Q ss_pred HHHHHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCc
Q 006778 215 VRWLGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGS 286 (631)
Q Consensus 215 ~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~ 286 (631)
.+.+.+..++.||++++++.|++++. +.+ .+.+ .+|+ +.++.+|.||.|.|..+.
T Consensus 203 ~~~l~~~l~~~GV~~~~~~~v~~v~~---~~~---~~~~----~~g~-------~~~i~~d~vi~~~G~~~~ 257 (430)
T 3hyw_A 203 KRLVEDLFAERNIDWIANVAVKAIEP---DKV---IYED----LNGN-------THEVPAKFTMFMPSFQGP 257 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEECS---SEE---EEEC----TTSC-------EEEEECSEEEEECEEECC
T ss_pred HHHHHHHHHhCCeEEEeCceEEEEeC---Cce---EEEe----eCCC-------ceEeecceEEEeccCCCc
Confidence 45567777889999999999998742 222 2222 2333 478999999999997763
No 330
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=92.64 E-value=0.24 Score=55.21 Aligned_cols=57 Identities=9% Similarity=0.097 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHhcCcEEecCceEEEEEEcCC-CcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecC
Q 006778 211 LSQLVRWLGGKAEELGVEIYPGFAASEILYDAD-NKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEG 282 (631)
Q Consensus 211 ~~~l~~~L~~~a~~~Gv~i~~g~~v~~i~~~~~-g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G 282 (631)
.+.|.+.|.+.++..|++|++++.|.+|..+++ |++++|++.+ |.+++||.||.+..
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~---------------Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQF---------------GQRIISKHFIIEDS 434 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETT---------------SCEEECSEEEEEGG
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCC---------------CCEEEcCEEEEChh
Confidence 578999999999999999999999999988765 7888888665 78899999988544
No 331
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=92.61 E-value=0.037 Score=56.97 Aligned_cols=52 Identities=13% Similarity=0.217 Sum_probs=41.8
Q ss_pred CCCCcccccCC--ccccce--EEEc-CCCCeEEEEecCCccccccccccCCCCCcceeC
Q 006778 566 DPKIPELVNLP--EYAGPE--YVPD-EKNQLKLQINAQNCLHCKACDIKDPKQNIKWTV 619 (631)
Q Consensus 566 ~~~~~~~~~~~--~~~~p~--~~~~-~~~~~~~~~~~~~c~~c~tC~i~~p~~~i~w~~ 619 (631)
+++.|..|..+ +.+||. ...+ +++ .+.||.+.|+.|+.|...||++.|.+..
T Consensus 147 ~~~~C~~C~~~~Cv~~CP~gAi~~~~~~g--~v~id~~kCigCg~Cv~aCP~~Ai~~~~ 203 (352)
T 2ivf_B 147 LARMCNHCTNPACLAACPTGAIYKREDNG--IVLVDQERCKGHRHCVEACPYKAIYFNP 203 (352)
T ss_dssp EEECCCCCSSCHHHHHCTTCCEEECTTTC--CEEECTTTCCCCCHHHHHCTTCCEEEET
T ss_pred CCCCCcCcCCccccccCCCCceeecCCCC--eEEechhhcCCchHHHhhcCccceeccc
Confidence 57889988754 788998 4333 344 5788999999999999999999998864
No 332
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.58 E-value=0.1 Score=45.89 Aligned_cols=33 Identities=24% Similarity=0.467 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|+|+|+|..|...|..|++. |.+|+++|+.+
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~------g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA------GKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCeEEEEECCH
Confidence 3699999999999999999999 99999999865
No 333
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=92.50 E-value=0.13 Score=43.15 Aligned_cols=33 Identities=33% Similarity=0.493 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCC-CeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVD-LSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G-~~V~vlEk~~ 146 (631)
..|+|+|+|..|..+|..|.+. | .+|+++++.+
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~------g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTS------SNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC------SSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCH
Confidence 4699999999999999999998 8 8999999864
No 334
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=92.24 E-value=0.19 Score=52.58 Aligned_cols=51 Identities=22% Similarity=0.213 Sum_probs=39.5
Q ss_pred HHHHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCC
Q 006778 218 LGGKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRG 285 (631)
Q Consensus 218 L~~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s 285 (631)
+.+..++.|++++.++++..+..+.++. .|.+.+ |.++.+|.||.|.|..+
T Consensus 208 ~~~~l~~~gi~v~~~~~v~~v~~~~~~~--~v~~~~---------------g~~i~~D~vi~~~g~~~ 258 (401)
T 3vrd_B 208 YGFGTENALIEWHPGPDAAVVKTDTEAM--TVETSF---------------GETFKAAVINLIPPQRA 258 (401)
T ss_dssp SCTTSTTCSEEEECTTTTCEEEEETTTT--EEEETT---------------SCEEECSEEEECCCEEE
T ss_pred HHHHHHhcCcEEEeCceEEEEEecccce--EEEcCC---------------CcEEEeeEEEEecCcCC
Confidence 3344466899999999998888776543 367776 78999999999999654
No 335
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=91.91 E-value=0.065 Score=57.71 Aligned_cols=52 Identities=19% Similarity=0.271 Sum_probs=41.5
Q ss_pred CCCCcccccCC--ccccce--EEEc-CCCCeEEEEecCCccccccccccCCCCCcceeC
Q 006778 566 DPKIPELVNLP--EYAGPE--YVPD-EKNQLKLQINAQNCLHCKACDIKDPKQNIKWTV 619 (631)
Q Consensus 566 ~~~~~~~~~~~--~~~~p~--~~~~-~~~~~~~~~~~~~c~~c~tC~i~~p~~~i~w~~ 619 (631)
+++.|..|... +.+||. ...+ +++ .+.||.+.|+.||.|...||++.|.|..
T Consensus 180 ~~~~C~~C~~~~Cv~aCP~gAI~~~~~~g--~v~id~~kCigCg~Cv~~CP~~AI~~~~ 236 (512)
T 1q16_B 180 LPRLCEHCLNPACVATCPSGAIYKREEDG--IVLIDQDKCRGWRMCITGCPYKKIYFNW 236 (512)
T ss_dssp EEECCCCCSSCHHHHTCTTCCEEEETTTC--CEEECTTTCCCCCCHHHHCTTCCEEEET
T ss_pred cCccCcCCCCchhhhhCCcCcEEeecCCC--eEEECHHHCCCchHHHhhCCccceeccc
Confidence 67889888753 778997 4332 344 5789999999999999999999998874
No 336
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=90.88 E-value=0.12 Score=37.70 Aligned_cols=26 Identities=19% Similarity=0.549 Sum_probs=22.3
Q ss_pred EEEEecCCccccccccccCCCCCccee
Q 006778 592 KLQINAQNCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 592 ~~~~~~~~c~~c~tC~i~~p~~~i~w~ 618 (631)
++.||.+.|+.||.|.-.|| ..|.|.
T Consensus 1 ~i~i~~~~C~~C~~C~~~Cp-~~~~~~ 26 (59)
T 1dwl_A 1 TIVIDHEECIGCESCVELCP-EVFAMI 26 (59)
T ss_dssp CEEESSCCCSSCCGGGGTST-TTEEEE
T ss_pred CeEEChhhCcChhHHHHHCC-HHheec
Confidence 36789999999999999999 577773
No 337
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=90.79 E-value=1.6 Score=46.95 Aligned_cols=36 Identities=28% Similarity=0.266 Sum_probs=30.2
Q ss_pred CCCEEEEccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCC
Q 006778 414 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 455 (631)
Q Consensus 414 ~~~v~LiGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~ 455 (631)
.+++.++|++.+ |.|++-|+.+|..+|+.|.+.+..
T Consensus 460 ~~~l~~aG~~~~------g~~v~gai~sG~~aA~~il~~l~~ 495 (504)
T 1sez_A 460 LPGLFYAGNHRG------GLSVGKALSSGCNAADLVISYLES 495 (504)
T ss_dssp STTEEECCSSSS------CSSHHHHHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeecCC------CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 379999999864 568999999999999999876543
No 338
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=90.53 E-value=0.22 Score=43.42 Aligned_cols=32 Identities=22% Similarity=0.333 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
.|+|+|+|..|...|..|.+. |.+|+++++..
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~------g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRM------GHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHT------TCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 599999999999999999998 99999999764
No 339
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.28 E-value=0.24 Score=51.78 Aligned_cols=35 Identities=29% Similarity=0.430 Sum_probs=31.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
...|+|||+|++|+.+|..|... |.+|+++|+.+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL------GAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHC------CCEEEEEcCCHH
Confidence 45799999999999999999999 999999998763
No 340
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=90.19 E-value=0.046 Score=57.19 Aligned_cols=51 Identities=24% Similarity=0.383 Sum_probs=35.7
Q ss_pred CCCCccc-ccCC--ccccce--EEEcC---CCC--eEEEEecCCccccccccccCCCCCcc
Q 006778 566 DPKIPEL-VNLP--EYAGPE--YVPDE---KNQ--LKLQINAQNCLHCKACDIKDPKQNIK 616 (631)
Q Consensus 566 ~~~~~~~-~~~~--~~~~p~--~~~~~---~~~--~~~~~~~~~c~~c~tC~i~~p~~~i~ 616 (631)
|.+.|.. |+.. +-+||. ..+++ ++. ..+.||.+.|+.||.|.-.||+..|.
T Consensus 214 d~e~~~~~Ce~~~cv~~CPt~AI~~~~~~~~g~~~~~v~id~~~Ci~Cg~C~~~CP~~Ai~ 274 (386)
T 3or1_B 214 DHENLAELCEIPLAVAACPTAAVKPITAEVNGQKVKSVAINNDRCMYCGNCYTMCPALPLS 274 (386)
T ss_dssp CTTTHHHHCCHHHHHHHCTTCCEEEEEEEETTEEEEEEEECTTTCCCCCHHHHHCTTCCCC
T ss_pred chhhhcccccchhhhhhCchhhccccccccCCccccccccCCCcCCccccHHHhCcHhhCc
Confidence 5555543 4222 567888 43322 342 47999999999999999999998773
No 341
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=90.16 E-value=0.038 Score=41.49 Aligned_cols=55 Identities=9% Similarity=-0.012 Sum_probs=36.3
Q ss_pred eEecCCCCcccccCCccccce-EEEcCCCCeEEEEe---cC--CccccccccccCCCCCccee
Q 006778 562 LRLRDPKIPELVNLPEYAGPE-YVPDEKNQLKLQIN---AQ--NCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~---~~--~c~~c~tC~i~~p~~~i~w~ 618 (631)
+.+ |++.|..|..-+..||. +..++++. ...++ .+ -|..|+.|.-.||.+.|+++
T Consensus 4 ~~i-d~~~C~~C~~C~~~Cp~~~~~~~~~~-~~~~~~~~~~~~~c~~c~~C~~~CP~~Ai~~~ 64 (66)
T 1sj1_A 4 VSV-DQDTCIGDAICASLCPDVFEMNDEGK-AQPKVEVIEDEELYNCAKEAMEACPVSAITIE 64 (66)
T ss_dssp EEE-CTTTCCCCCHHHHHCTTTEEECTTSC-EEESCSCBCCHHHHHHHHHHHHHCTTCCEEEE
T ss_pred EEE-CcccCcCchHHHHhCCceEEECCCCc-eeecccCCCcHHHHHHHHHHHhhCCHhhEEEe
Confidence 344 67788877655678887 55544442 22334 23 36788999999999988875
No 342
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=90.06 E-value=0.1 Score=54.26 Aligned_cols=39 Identities=26% Similarity=0.508 Sum_probs=31.3
Q ss_pred ccccce--EEEcCCCCeEEEEecCCccccccccccCCCCCcc
Q 006778 577 EYAGPE--YVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIK 616 (631)
Q Consensus 577 ~~~~p~--~~~~~~~~~~~~~~~~~c~~c~tC~i~~p~~~i~ 616 (631)
+-+||. ...++++ ..+.||.+.|+.||.|.-+||...|.
T Consensus 217 v~~CP~~AI~~~~~~-~~~~id~~~C~~Cg~C~~~CP~~Ai~ 257 (366)
T 3mm5_B 217 VAACPTGALKPDMKN-KTIKVDVEKCMYCGNCYTMCPGMPLF 257 (366)
T ss_dssp HHTCTTCCEEEETTT-TEEEECGGGCCCCCHHHHHCTTCCCC
T ss_pred hccCCccceEecCCC-CeEEEehhhCCCcchHHHhCCHhhcc
Confidence 568998 5554322 37999999999999999999998874
No 343
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=89.80 E-value=0.11 Score=43.08 Aligned_cols=28 Identities=14% Similarity=0.329 Sum_probs=25.6
Q ss_pred EEEEecCCccccccccccCCCCCcceeC
Q 006778 592 KLQINAQNCLHCKACDIKDPKQNIKWTV 619 (631)
Q Consensus 592 ~~~~~~~~c~~c~tC~i~~p~~~i~w~~ 619 (631)
.+.||.+.|+.||.|.-.||.+.|.|..
T Consensus 37 ~~~id~~~C~~Cg~C~~~CP~~ai~~~~ 64 (103)
T 1xer_A 37 IVGVDFDLCIADGSCINACPVNVFQWYD 64 (103)
T ss_dssp SEEEETTTCCCCCHHHHHCTTCCCEEEE
T ss_pred eEEEehhhCCChhhHHHHcCccCeeccc
Confidence 5889999999999999999999998864
No 344
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=89.29 E-value=0.32 Score=46.62 Aligned_cols=33 Identities=21% Similarity=0.263 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKG 145 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~ 145 (631)
...|+|||||..|...|..|.+. |.+|+|+++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~------GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQE------GAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGG------CCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEECCC
Confidence 45799999999999999999999 9999999864
No 345
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=89.25 E-value=0.3 Score=50.71 Aligned_cols=35 Identities=26% Similarity=0.342 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
...|+|||+|.+|+.+|..|... |.+|+++|+.+.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~~~ 218 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRL------GAKTTGYDVRPE 218 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHH------TCEEEEECSSGG
T ss_pred CCEEEEECchHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 35799999999999999999999 999999998753
No 346
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=89.23 E-value=0.13 Score=61.76 Aligned_cols=55 Identities=22% Similarity=0.433 Sum_probs=41.7
Q ss_pred ecCCCCcccccCCccccce--EEE---cCC--------------------C-CeEEEEecCCccccccccccCCC--CCc
Q 006778 564 LRDPKIPELVNLPEYAGPE--YVP---DEK--------------------N-QLKLQINAQNCLHCKACDIKDPK--QNI 615 (631)
Q Consensus 564 ~~~~~~~~~~~~~~~~~p~--~~~---~~~--------------------~-~~~~~~~~~~c~~c~tC~i~~p~--~~i 615 (631)
+.|++.|..|.....+||. ... +++ + ...++|+.+.|+.||.|.-.||. +.|
T Consensus 682 ~~d~~kCi~Cg~Cv~vCP~~AI~~~~~~~~e~~~ap~g~~~~~~~~k~~~g~~~~~~v~~~~C~gCG~Cv~vCP~~~~AI 761 (1231)
T 2c42_A 682 QWVPENCIQCNQCAFVCPHSAILPVLAKEEELVGAPANFTALEAKGKELKGYKFRIQINTLDCMGCGNCADICPPKEKAL 761 (1231)
T ss_dssp EECTTTCCCCCHHHHHCSSCCEEEEEECGGGGTTCCTTCCCEECCSGGGTTCEEEEEECTTTCCCCCHHHHHCSSSSCSE
T ss_pred EEeCccCCchhhHHHhCCcccccccccchHHHhhCcccccccccccccccccccceeechhhCCChhHHHhhCCCCccCe
Confidence 4589999999888899998 221 110 1 12478999999999999999999 777
Q ss_pred cee
Q 006778 616 KWT 618 (631)
Q Consensus 616 ~w~ 618 (631)
+..
T Consensus 762 ~~~ 764 (1231)
T 2c42_A 762 VMQ 764 (1231)
T ss_dssp EEE
T ss_pred EEe
Confidence 643
No 347
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=89.20 E-value=0.25 Score=47.00 Aligned_cols=32 Identities=19% Similarity=0.325 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
.|+|+|+|..|...|..|.+. |.+|+++|+.+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~------g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR------KYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT------TCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCeEEEEECCH
Confidence 599999999999999999998 99999999865
No 348
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.14 E-value=0.32 Score=49.35 Aligned_cols=33 Identities=21% Similarity=0.395 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|.|||+|..|.+.|..|++. |.+|+++.|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT------GHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT------TCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCh
Confidence 4799999999999999999998 99999999864
No 349
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=88.91 E-value=0.28 Score=48.55 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
...|+|||||..|+..|..|.+. |++|+|+++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~------Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPT------GCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGG------TCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhC------CCEEEEEcCCC
Confidence 45799999999999999999999 99999999754
No 350
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=88.84 E-value=0.16 Score=56.46 Aligned_cols=58 Identities=14% Similarity=0.175 Sum_probs=42.6
Q ss_pred CCCceEecCCCCccc--ccCC-ccccce-------EEEcCCCCeEEEEecCCccccccccccCCCCCcc
Q 006778 558 QPAHLRLRDPKIPEL--VNLP-EYAGPE-------YVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIK 616 (631)
Q Consensus 558 ~~~h~~~~~~~~~~~--~~~~-~~~~p~-------~~~~~~~~~~~~~~~~~c~~c~tC~i~~p~~~i~ 616 (631)
..-+|-|.|.|.|.. |+.. ...||- ...+++. .+-.|.-+-|+-||-|--|||++.|+
T Consensus 4 ~~~~~~~~~~~~c~~~~~~~~c~~~cp~~~~~~~~~~~~~~~-~~~~i~~~~c~~~~~~~~~cp~~~i~ 71 (608)
T 3j16_B 4 KNSRIAIVSADKCKPKKCRQECKRSCPVVKTGKLCIEVTPTS-KIAFISEILCIGCGICVKKCPFDAIQ 71 (608)
T ss_dssp CCEEEEEECSSSCCHHHHCSHHHHHCHHHHHTCCSEEEETTT-TEEEECTTTCCCCCHHHHHCSSCCEE
T ss_pred ccceEEEEeccccCccccccchhhcCCCccCCceEEEEcCCC-CceEEehhhccccccccccCCccceE
Confidence 334678888888864 6655 578887 3333332 25678899999999999999999886
No 351
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=88.76 E-value=0.21 Score=39.43 Aligned_cols=25 Identities=20% Similarity=0.602 Sum_probs=22.2
Q ss_pred EEecCCccccccccccCCCCCccee
Q 006778 594 QINAQNCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 594 ~~~~~~c~~c~tC~i~~p~~~i~w~ 618 (631)
.++.+.|+.||.|.-.||++.|.+.
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~~ 26 (82)
T 3eun_A 2 LMITDECINCDVCEPECPNGAISQG 26 (82)
T ss_dssp EEECTTCCCCCTTGGGCTTCCEEEC
T ss_pred eEeCCCCcCccchHHHCChhheEcC
Confidence 3678999999999999999999873
No 352
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=88.50 E-value=0.1 Score=38.95 Aligned_cols=26 Identities=19% Similarity=0.604 Sum_probs=22.8
Q ss_pred EEEEecCCccccccccccCCCCCccee
Q 006778 592 KLQINAQNCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 592 ~~~~~~~~c~~c~tC~i~~p~~~i~w~ 618 (631)
++.||.+.|+.||.|...|| +.|++.
T Consensus 3 ~~~id~~~C~~Cg~C~~~CP-~~~~~~ 28 (64)
T 1dax_A 3 KFYVDQDECIACESCVEIAP-GAFAMD 28 (64)
T ss_dssp CCEECSTTCCSCCHHHHHCT-TTEEEC
T ss_pred EEEEccccCCCchHHHHhCC-ccEeEc
Confidence 46789999999999999999 887764
No 353
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=88.27 E-value=0.33 Score=52.08 Aligned_cols=52 Identities=25% Similarity=0.475 Sum_probs=40.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC--------CCCccccccccChHhHHH
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE--------VGAHIISGNVFEPRALNE 165 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~--------~g~~~~~g~~i~~~~l~~ 165 (631)
+.|+|+|+|-.|...|..|.+. |++|+|+|+.+. .+.....|...++..|.+
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~------~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~ 63 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGE------NNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHE 63 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCST------TEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHh
Confidence 4699999999999999999998 999999998753 333445566666666543
No 354
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=88.03 E-value=0.43 Score=51.62 Aligned_cols=60 Identities=15% Similarity=0.123 Sum_probs=45.8
Q ss_pred HHHHhcCcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCCCCchhHHHHHHcCCC
Q 006778 220 GKAEELGVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 298 (631)
Q Consensus 220 ~~a~~~Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~~s~~~~~l~~~~g~~ 298 (631)
+.+++.||+|++++.|+++..++ .+.+|.+.+ |.++.+|.||+|+|.++.. ++.+..++.
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~--~v~~v~~~~---------------g~~i~aD~Vv~a~G~~p~~--~l~~~~g~~ 324 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNE--KVERVIDMN---------------NHEYKVDALIFADGRRPDI--NPITQAGGK 324 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSS--SCCEEEETT---------------CCEEECSEEEECCCEEECC--HHHHHTTCC
T ss_pred HHHHhCCcEEEeCCeeEEEecCC--ceEEEEeCC---------------CeEEEeCEEEECCCcCcCc--hHHHhcCCC
Confidence 66778899999999999997543 355677665 6789999999999988753 455555554
No 355
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=87.87 E-value=0.4 Score=50.36 Aligned_cols=35 Identities=31% Similarity=0.403 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
...|+|+|+|.+|+.+|..|+.. |.+|+++++.+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~------Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL------GAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCHH
Confidence 45799999999999999999988 999999998753
No 356
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=87.79 E-value=0.37 Score=48.67 Aligned_cols=33 Identities=27% Similarity=0.348 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|.|||+|-.|.+.|..|++. |.+|+++.|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS------GEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT------SCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCeEEEEEcCc
Confidence 4799999999999999999998 99999999864
No 357
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=87.78 E-value=0.46 Score=49.62 Aligned_cols=35 Identities=31% Similarity=0.400 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
...|+|+|+|.+|+.+|..|+.. |.+|+++++.+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~------Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRL------GAVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 45799999999999999999988 999999998753
No 358
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=87.72 E-value=0.45 Score=51.85 Aligned_cols=36 Identities=11% Similarity=0.166 Sum_probs=33.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVG 149 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g 149 (631)
-.|+|||||..|+.+|..|++. |.+|+++|+.+.+.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~------G~~Vtlv~~~~~~l 250 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNAT------GRRTVMLVRTEPLK 250 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCTTT
T ss_pred CeEEEECCCHHHHHHHHHHHHc------CCeEEEEEecCccc
Confidence 5799999999999999999999 99999999987654
No 359
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=87.64 E-value=5.3 Score=44.72 Aligned_cols=37 Identities=19% Similarity=-0.019 Sum_probs=29.9
Q ss_pred CCEEEEccCCccCCCCCCcchHHHHHHHHHHHHHHhcccC
Q 006778 415 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 454 (631)
Q Consensus 415 ~~v~LiGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~ 454 (631)
+|++++|++.+... ..-++-|+++|..+|+.|.+.+.
T Consensus 623 grl~FAGe~ts~~~---~g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 623 PRLFFAGEHTIRNY---PATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp CCEEECSGGGCTTS---TTSHHHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEeccccCCC---CcCHHHHHHHHHHHHHHHHHHcc
Confidence 69999999977532 34589999999999999877553
No 360
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=87.48 E-value=0.18 Score=39.67 Aligned_cols=26 Identities=19% Similarity=0.613 Sum_probs=23.0
Q ss_pred EEEEecCCccccccccccCCCCCccee
Q 006778 592 KLQINAQNCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 592 ~~~~~~~~c~~c~tC~i~~p~~~i~w~ 618 (631)
++.||.+.|+.||.|...|| +.+.+.
T Consensus 3 ~v~vd~~~CigCg~C~~~CP-~~~~~~ 28 (81)
T 1iqz_A 3 YTIVDKETCIACGACGAAAP-DIYDYD 28 (81)
T ss_dssp EEEECTTTCCCCSHHHHHCT-TTEEEC
T ss_pred EEEEecccCcccChhhHhCc-hheeeC
Confidence 68899999999999999999 777664
No 361
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=87.43 E-value=0.21 Score=37.18 Aligned_cols=27 Identities=15% Similarity=0.386 Sum_probs=23.3
Q ss_pred eEEEEecCCccccccccccCCCCCccee
Q 006778 591 LKLQINAQNCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 591 ~~~~~~~~~c~~c~tC~i~~p~~~i~w~ 618 (631)
.++.||.+.|+.||.|...||. .|+|.
T Consensus 2 ~~~~id~~~C~~C~~C~~~Cp~-~~~~~ 28 (66)
T 1sj1_A 2 WKVSVDQDTCIGDAICASLCPD-VFEMN 28 (66)
T ss_dssp EEEEECTTTCCCCCHHHHHCTT-TEEEC
T ss_pred cEEEECcccCcCchHHHHhCCc-eEEEC
Confidence 3688999999999999999994 77774
No 362
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=87.36 E-value=0.5 Score=47.76 Aligned_cols=33 Identities=18% Similarity=0.365 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCC--eEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~--~V~vlEk~~ 146 (631)
..|+|||+|..|...|..|++. |+ +|+++++..
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~------g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR------GIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCCh
Confidence 4799999999999999999998 88 999999864
No 363
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=87.28 E-value=0.61 Score=47.24 Aligned_cols=33 Identities=18% Similarity=0.348 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~ 146 (631)
..|.|||+|..|.+.|..|++. |+ +|+++|+..
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~------g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD------NLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCc
Confidence 4799999999999999999998 88 999999875
No 364
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=87.18 E-value=0.67 Score=50.24 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=33.9
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV 148 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~ 148 (631)
.+||++|||+|++|+++|..|++. |.+|+|||++...
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~------~~~v~~~e~~~~~ 40 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEA------GVQTLMLEMGQLW 40 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC------CCcEEEEeCCCCC
Confidence 369999999999999999999998 9999999998743
No 365
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=87.15 E-value=0.32 Score=34.91 Aligned_cols=25 Identities=28% Similarity=0.615 Sum_probs=21.6
Q ss_pred EEEecCCccccccccccCCCCCccee
Q 006778 593 LQINAQNCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 593 ~~~~~~~c~~c~tC~i~~p~~~i~w~ 618 (631)
+.| .+.|+.||.|.-.||.+.|.+.
T Consensus 2 ~~i-~~~C~~C~~C~~~CP~~ai~~~ 26 (55)
T 2fdn_A 2 YVI-NEACISCGACEPECPVNAISSG 26 (55)
T ss_dssp EEE-CTTCCCCCTTGGGCTTCCEECC
T ss_pred eEe-cccCcChhhHHHHCCccccCcC
Confidence 345 8899999999999999999764
No 366
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=87.00 E-value=0.45 Score=50.82 Aligned_cols=33 Identities=27% Similarity=0.313 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|+|||.|.+|+++|..|+++ |++|++.|+..
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~------G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKL------GAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHT------TCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhC------CCEEEEEeCCc
Confidence 5799999999999999999999 99999999865
No 367
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=86.92 E-value=0.29 Score=38.93 Aligned_cols=24 Identities=21% Similarity=0.710 Sum_probs=21.7
Q ss_pred EecCCccccccccccCCCCCccee
Q 006778 595 INAQNCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 595 ~~~~~c~~c~tC~i~~p~~~i~w~ 618 (631)
++.+.|+.||.|...||++.|.+.
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~ 26 (85)
T 2zvs_A 3 LITKKCINCDMCEPECPNEAISMG 26 (85)
T ss_dssp EECTTCCCCCTTTTTCTTCCEECC
T ss_pred EeCCcCcChhHHHHHCchhccCcC
Confidence 578999999999999999999864
No 368
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=86.91 E-value=0.55 Score=48.57 Aligned_cols=33 Identities=30% Similarity=0.326 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|+|+|+|.+|+.+|..|+.. |.+|+++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~------Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL------GAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 5799999999999999999998 99999999864
No 369
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=86.91 E-value=0.37 Score=51.32 Aligned_cols=34 Identities=26% Similarity=0.331 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
..|+|||.|.+|+++|..|+++ |++|++.|....
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~------G~~v~~~D~~~~ 39 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLAR------GVTPRVMDTRMT 39 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTT------TCCCEEEESSSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC------CCEEEEEECCCC
Confidence 3699999999999999999998 999999998764
No 370
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=86.79 E-value=0.21 Score=39.24 Aligned_cols=24 Identities=25% Similarity=0.484 Sum_probs=21.4
Q ss_pred EecCCccccccccccCCCCCccee
Q 006778 595 INAQNCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 595 ~~~~~c~~c~tC~i~~p~~~i~w~ 618 (631)
++.+.|+.||.|.-.||++.|.+.
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~ 26 (80)
T 1rgv_A 3 YINDDCTACDACVEECPNEAITPG 26 (80)
T ss_dssp CCCSCCCCCCTTTTTCTTCCEECC
T ss_pred EeCCCCcChhhHHHHcChhccCcC
Confidence 467899999999999999999864
No 371
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=86.75 E-value=0.17 Score=48.23 Aligned_cols=53 Identities=9% Similarity=0.007 Sum_probs=41.8
Q ss_pred CCCCcccccCC--ccccc---e--EEEcC-CCCeEEEEecCCcc--ccccccccCCCCCcceeCC
Q 006778 566 DPKIPELVNLP--EYAGP---E--YVPDE-KNQLKLQINAQNCL--HCKACDIKDPKQNIKWTVP 620 (631)
Q Consensus 566 ~~~~~~~~~~~--~~~~p---~--~~~~~-~~~~~~~~~~~~c~--~c~tC~i~~p~~~i~w~~p 620 (631)
++..|..|..+ +.+|| . ...++ ++ .+.||.+.|+ .|+.|...||++.|.+...
T Consensus 68 ~~~~C~~C~~p~C~~~CP~~~~gAi~~~~~~g--~v~id~~~C~~~~C~~C~~~CP~~Ai~~~~~ 130 (214)
T 1h0h_B 68 FPDQCRHCIAPPCKATADMEDESAIIHDDATG--CVLFTPKTKDLEDYESVISACPYDVPRKVAE 130 (214)
T ss_dssp EEECCCCCSSCHHHHHHTTTCTTSEEECTTTC--CEEECGGGGGCSCHHHHHHHCTTCCCEECTT
T ss_pred cCCcCcCcCCchhhccCCccccccEEecCCCC--eEEEeHHHCccccccHHHHhcCCCCeEecCC
Confidence 46778888764 67899 5 54443 34 5889999999 9999999999999998643
No 372
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=86.68 E-value=0.65 Score=46.15 Aligned_cols=33 Identities=18% Similarity=0.291 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|.|||+|..|...|..|++. |++|+++|+.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~------G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH------GFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCH
Confidence 3699999999999999999999 99999999875
No 373
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=86.61 E-value=0.49 Score=47.31 Aligned_cols=33 Identities=27% Similarity=0.405 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|.|||+|-.|.+.|..|++. |.+|++++|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~------g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS------LPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH------CTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHC------CCeEEEEEecc
Confidence 4799999999999999999999 99999999874
No 374
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=86.56 E-value=0.24 Score=38.60 Aligned_cols=27 Identities=15% Similarity=0.322 Sum_probs=23.7
Q ss_pred EEEecCCccccccccccCCCCCcceeC
Q 006778 593 LQINAQNCLHCKACDIKDPKQNIKWTV 619 (631)
Q Consensus 593 ~~~~~~~c~~c~tC~i~~p~~~i~w~~ 619 (631)
..++.+.|+.||.|.-.||.+.|+...
T Consensus 3 ~~~~~~~C~~Cg~C~~~CP~~a~~~~~ 29 (80)
T 1jb0_C 3 TVKIYDTCIGCTQCVRACPTDVLEMVP 29 (80)
T ss_dssp EEEEETTCCCCCHHHHHCTTCCCEEEE
T ss_pred CcccCCcCcChhHHHHHCCcccccccc
Confidence 567899999999999999999987654
No 375
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=86.33 E-value=0.77 Score=46.85 Aligned_cols=33 Identities=18% Similarity=0.225 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~ 146 (631)
..|.|||+|..|.+.|..|++. |+ +|+++|...
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~------g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR------ELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCh
Confidence 4799999999999999999998 88 999999875
No 376
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=86.27 E-value=0.66 Score=48.10 Aligned_cols=35 Identities=34% Similarity=0.416 Sum_probs=31.8
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~ 146 (631)
.+..|||+|||.||..+|..|... |+ +|+++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~------Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAA------GATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHc------CCCeEEEEECCC
Confidence 457899999999999999999998 99 999999864
No 377
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=86.26 E-value=0.59 Score=49.91 Aligned_cols=34 Identities=26% Similarity=0.478 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
..|.|||+|..|+..|..|++. |++|+++++.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~------G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL------GANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhc------CCEEEEEECCHH
Confidence 4699999999999999999999 999999998753
No 378
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=86.17 E-value=0.77 Score=48.41 Aligned_cols=34 Identities=21% Similarity=0.322 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
..|+|||.|..|...|..|.+. |++|+|||+.+.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~------g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS------GVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCCEEEEECCHH
Confidence 4699999999999999999998 999999998753
No 379
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=86.14 E-value=0.25 Score=38.90 Aligned_cols=24 Identities=21% Similarity=0.603 Sum_probs=21.6
Q ss_pred EecCCccccccccccCCCCCccee
Q 006778 595 INAQNCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 595 ~~~~~c~~c~tC~i~~p~~~i~w~ 618 (631)
|+.+.|+.||.|.-.||++.|.+.
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~ 26 (82)
T 2fgo_A 3 KITDDCINCDVCEPECPNGAISQG 26 (82)
T ss_dssp CCCTTCCCCCTTGGGCTTCCEEEC
T ss_pred eeCCCCCChhhHHHHCChhccCCC
Confidence 567899999999999999999874
No 380
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=86.14 E-value=0.52 Score=47.80 Aligned_cols=33 Identities=30% Similarity=0.323 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
-.|.|||+|..|..-|..+++. |++|+++|..+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~------G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhC------CCeEEEEECCH
Confidence 3699999999999999999999 99999999865
No 381
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=85.79 E-value=0.27 Score=35.73 Aligned_cols=25 Identities=24% Similarity=0.693 Sum_probs=21.1
Q ss_pred EEEEecCCccccccccccCCCCCcce
Q 006778 592 KLQINAQNCLHCKACDIKDPKQNIKW 617 (631)
Q Consensus 592 ~~~~~~~~c~~c~tC~i~~p~~~i~w 617 (631)
++.||.+.|+.||.|...||. .|.+
T Consensus 2 ~~~i~~~~C~~C~~C~~~Cp~-~~~~ 26 (60)
T 1rof_A 2 KVRVDADACIGCGVCENLCPD-VFQL 26 (60)
T ss_dssp CSEECTTTCCSCCSSTTTCTT-TBCC
T ss_pred EEEEchhhCCCChHHHHhCcH-HHeE
Confidence 357889999999999999996 6654
No 382
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=85.60 E-value=0.72 Score=44.96 Aligned_cols=34 Identities=24% Similarity=0.351 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~ 146 (631)
...|+|||+|..|..+|..|++. |+ +++|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~------Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA------GVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH------TCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc------CCCeEEEEcCCC
Confidence 46799999999999999999999 97 899999864
No 383
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=85.33 E-value=0.79 Score=45.29 Aligned_cols=33 Identities=15% Similarity=0.117 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
.|.|||+|..|.+.|..|++. |.+|+++++.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ------GHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhC------CCCEEEEEcCcc
Confidence 489999999999999999998 999999998763
No 384
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=84.98 E-value=0.76 Score=47.06 Aligned_cols=33 Identities=24% Similarity=0.202 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|.|||+|..|...|..|++. |.+|+++++.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~------g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK------GQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 4799999999999999999998 99999999764
No 385
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=84.90 E-value=0.77 Score=45.99 Aligned_cols=32 Identities=22% Similarity=0.340 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
.|.|||+|..|...|..|++. |++|+++++.+
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~------G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAAT------GHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCeEEEEECCH
Confidence 599999999999999999998 99999999865
No 386
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=84.88 E-value=0.079 Score=58.58 Aligned_cols=59 Identities=22% Similarity=0.180 Sum_probs=42.5
Q ss_pred CCceEecCCCCcccccCCccccce------EEEcCCCCe-------EEEEecCCccccccccccCCCCCccee
Q 006778 559 PAHLRLRDPKIPELVNLPEYAGPE------YVPDEKNQL-------KLQINAQNCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 559 ~~h~~~~~~~~~~~~~~~~~~~p~------~~~~~~~~~-------~~~~~~~~c~~c~tC~i~~p~~~i~w~ 618 (631)
...+.+ |++.|..|..-+-+||. +...+.+.. ...|+.+.|+.||.|.-.||++.|++.
T Consensus 137 ~~~i~~-d~~kCi~Cg~Cv~~CP~~~~~~ai~~~~~g~~~~i~~~~~~~i~~~~Ci~Cg~Cv~~CP~gAi~~~ 208 (574)
T 3c8y_A 137 SKSLTV-DRTKCLLCGRCVNACGKNTETYAMKFLNKNGKTIIGAEDEKCFDDTNCLLCGQCIIACPVAALSEK 208 (574)
T ss_dssp SSSEEE-EGGGCCCCCHHHHHHHHHHSCCCSEEEEETTEEEEESGGGCCGGGSSCCCCCHHHHHCSSTTEEEC
T ss_pred CCccee-CcccCcCCCCccchhCchhcCCceeeccCCccceecccccceechhhCCcchhHHHhhccCCcccc
Confidence 345655 78899998777788994 222222211 145789999999999999999999865
No 387
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=84.82 E-value=0.24 Score=52.10 Aligned_cols=36 Identities=28% Similarity=0.414 Sum_probs=29.0
Q ss_pred ccccce--EEEcCCCCeEEEEecCCccccccccccCCCCCc
Q 006778 577 EYAGPE--YVPDEKNQLKLQINAQNCLHCKACDIKDPKQNI 615 (631)
Q Consensus 577 ~~~~p~--~~~~~~~~~~~~~~~~~c~~c~tC~i~~p~~~i 615 (631)
+-.||. ..++ ++ ++.||.+.|+.||.|.-.||+..+
T Consensus 264 v~~CPt~Ai~~~-~~--~~~id~~~Ci~Cg~Ci~~CP~~~~ 301 (418)
T 3mm5_A 264 VKLCPTGAIKWD-GK--ELTIDNRECVRCMHCINKMPKALK 301 (418)
T ss_dssp GGGCTTCCEEEC-SS--CEEECTTTCCCCCHHHHHCTTTEE
T ss_pred cccCCccccccC-Cc--eeEEChhhcCccChhHHhCcHhhc
Confidence 458898 5554 22 799999999999999999998643
No 388
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=84.80 E-value=0.95 Score=41.46 Aligned_cols=35 Identities=23% Similarity=0.192 Sum_probs=29.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
.-.|+|+|+|..|...|..|.+.. |.+|+++|+.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~-----g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARY-----GKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHH-----CSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhcc-----CCeEEEEECCH
Confidence 346999999999999999998731 78999999865
No 389
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=84.71 E-value=0.91 Score=46.22 Aligned_cols=33 Identities=33% Similarity=0.443 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~ 146 (631)
..|.|||+|..|.+.|..|++. |+ +|+++|...
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~------g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK------DLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCH
Confidence 5799999999999999999998 88 999999875
No 390
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=84.64 E-value=0.13 Score=37.50 Aligned_cols=23 Identities=26% Similarity=0.736 Sum_probs=20.0
Q ss_pred EEEecCCccccccccccCCCCCcce
Q 006778 593 LQINAQNCLHCKACDIKDPKQNIKW 617 (631)
Q Consensus 593 ~~~~~~~c~~c~tC~i~~p~~~i~w 617 (631)
+.|| +.|++||.|.-.||. .|.+
T Consensus 2 v~id-~~C~~C~~C~~~CP~-~~~~ 24 (58)
T 1f2g_A 2 IEVN-DDCMACEACVEICPD-VFEM 24 (58)
T ss_dssp CBCT-TTCCCCCHHHHHCTT-TEEE
T ss_pred cEEC-CcCccchHHHHhCCc-cEEE
Confidence 5688 999999999999997 6765
No 391
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=84.62 E-value=0.83 Score=47.35 Aligned_cols=33 Identities=27% Similarity=0.378 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|+|+|+|..|+.+|..|+.. |.+|+++++.+
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~------Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGM------GAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCH
Confidence 5799999999999999999998 99999999864
No 392
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=84.46 E-value=0.95 Score=42.71 Aligned_cols=34 Identities=15% Similarity=0.233 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
..|.|||+|-.|.+.|..|++. |.+|+++++.+.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~------g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIA------GHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCHH
Confidence 4699999999999999999998 999999998764
No 393
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=84.36 E-value=0.85 Score=45.91 Aligned_cols=32 Identities=34% Similarity=0.475 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|.|||+|-.|.+.|..|+ . |.+|+++.|..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~------g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L------YHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T------TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-c------CCceEEEECCH
Confidence 47999999999999999999 8 99999999864
No 394
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=84.21 E-value=0.83 Score=49.15 Aligned_cols=33 Identities=21% Similarity=0.453 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|.|||+|..|+..|..|++. |.+|+++++.+
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~------G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADI------GHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhC------CCEEEEEECCH
Confidence 5799999999999999999999 99999999865
No 395
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=84.08 E-value=0.45 Score=41.87 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
...|+|||+|..|...|..|++. |.+|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~------g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP------QYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT------TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCEEEEEcCCH
Confidence 35799999999999999999887 99999999864
No 396
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=84.07 E-value=0.88 Score=45.49 Aligned_cols=32 Identities=28% Similarity=0.394 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
.|.|||+|..|...|..|++. |.+|+++++.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQG------GNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhC------CCcEEEEECCH
Confidence 699999999999999999998 99999999864
No 397
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=84.01 E-value=0.91 Score=47.20 Aligned_cols=34 Identities=35% Similarity=0.506 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
...|+|+|+|..|+.+|..|+.. |.+|+++++..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~------Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGM------GATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 45799999999999999999998 99999999864
No 398
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=83.80 E-value=1.3 Score=47.96 Aligned_cols=36 Identities=31% Similarity=0.487 Sum_probs=33.4
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
.+||++|||+|++|+.+|..|++. |.+|+|||++..
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~------~~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQA------GIPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC------CCcEEEEECCCC
Confidence 469999999999999999999998 999999999863
No 399
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=83.76 E-value=0.94 Score=46.10 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=31.5
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
|+..|.|||+|..|.+.|..|++. |.+|+++++.+
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~------G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHEN------GEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCH
Confidence 567899999999999999999998 99999999864
No 400
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=83.70 E-value=0.96 Score=45.32 Aligned_cols=34 Identities=29% Similarity=0.359 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
...|.|||.|..|...|..|++. |++|+++++.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA------GLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC------CCeEEEEECCH
Confidence 35799999999999999999999 99999999865
No 401
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=83.70 E-value=0.74 Score=46.03 Aligned_cols=36 Identities=22% Similarity=0.261 Sum_probs=32.2
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
+...|.|||.|..|...|..|++. |++|+++++.+.
T Consensus 14 ~~~~I~vIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~ 49 (296)
T 3qha_A 14 EQLKLGYIGLGNMGAPMATRMTEW------PGGVTVYDIRIE 49 (296)
T ss_dssp -CCCEEEECCSTTHHHHHHHHTTS------TTCEEEECSSTT
T ss_pred CCCeEEEECcCHHHHHHHHHHHHC------CCeEEEEeCCHH
Confidence 346799999999999999999998 999999998865
No 402
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=83.67 E-value=1 Score=46.60 Aligned_cols=35 Identities=29% Similarity=0.411 Sum_probs=31.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~ 146 (631)
.+..|||+|||-+|..+|..|... |. +|+++|+..
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~------G~~~I~v~Dr~G 226 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDL------GVKNVVAVDRKG 226 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETTE
T ss_pred CCcEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCC
Confidence 467899999999999999999998 88 899999863
No 403
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=83.66 E-value=0.92 Score=46.23 Aligned_cols=32 Identities=31% Similarity=0.447 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKG 145 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~ 145 (631)
..|.|||+|-.|.+.|..|++. |.+|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~------g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA------GEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT------TCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCEEEEEECh
Confidence 4799999999999999999998 9999999974
No 404
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=83.64 E-value=1.1 Score=47.61 Aligned_cols=34 Identities=18% Similarity=0.266 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
..|.|||.|-.||.+|..|++. |++|+.+|..+.
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~------G~~V~g~Did~~ 55 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALL------GHRVVGYDVNPS 55 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCEEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHHhC------CCcEEEEECCHH
Confidence 5799999999999999999999 999999997653
No 405
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=83.51 E-value=1 Score=47.93 Aligned_cols=36 Identities=22% Similarity=0.416 Sum_probs=32.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEV 148 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~ 148 (631)
...+.|||.|..|+..|..|++. |++|+++++.+..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~------G~~V~~~D~~~~k 43 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF------GHEVVCVDKDARK 43 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCSTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC------CCEEEEEeCCHHH
Confidence 46799999999999999999999 9999999998753
No 406
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=83.36 E-value=1.1 Score=47.78 Aligned_cols=55 Identities=16% Similarity=0.232 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHhc--------CcEEecCceEEEEEEcCCCcEEEEEeCCCccccCCCccccccCceEEEcCEEEEecCC
Q 006778 212 SQLVRWLGGKAEEL--------GVEIYPGFAASEILYDADNKVIGIGTNDMGIAKDGSKKENFQRGVELRGRITLLAEGC 283 (631)
Q Consensus 212 ~~l~~~L~~~a~~~--------Gv~i~~g~~v~~i~~~~~g~v~gV~~~d~g~~~~G~~~~~f~~g~~i~a~~vV~A~G~ 283 (631)
..+.+.|.+.+.+. |++|+++++|++|..++++ + .|++.+ |.+++||.||.|++.
T Consensus 206 ~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~-v-~v~~~~---------------g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 206 EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGG-V-TVKTED---------------NSVYSADYVMVSASL 268 (472)
T ss_dssp THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSC-E-EEEETT---------------SCEEEESEEEECSCH
T ss_pred HHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCc-E-EEEECC---------------CCEEEcCEEEEecCH
Confidence 46667777666544 6789999999999987744 5 377776 678999999999985
No 407
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=83.36 E-value=1.2 Score=45.24 Aligned_cols=33 Identities=27% Similarity=0.333 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~ 146 (631)
..|.|||+|..|...|..|++. |+ +|+++|...
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~------g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK------NLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCH
Confidence 4699999999999999999998 87 899999765
No 408
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=83.32 E-value=1.1 Score=45.10 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~ 146 (631)
..|.|||+|..|...|..|++. |+ +|+++|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~------g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK------ELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCeEEEEeCCc
Confidence 4699999999999999999998 86 899999764
No 409
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=82.87 E-value=1.3 Score=48.41 Aligned_cols=36 Identities=44% Similarity=0.738 Sum_probs=33.6
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
.+||+||||+|++|+++|.+|++. |++|+|||++..
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~------g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEA------GKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT------TCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCCC
Confidence 469999999999999999999998 999999999864
No 410
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=82.16 E-value=1.2 Score=43.88 Aligned_cols=33 Identities=24% Similarity=0.459 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|+|+|+|.+|.++|..|++. |.+|+|+.|..
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~------G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSL------DCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHc------CCEEEEEECCH
Confidence 4699999999999999999999 99999998764
No 411
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=82.09 E-value=0.98 Score=45.80 Aligned_cols=34 Identities=29% Similarity=0.317 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
..|.|||+|.-|.+.|..|++. |++|+++|+.+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~------G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 3699999999999999999999 999999998753
No 412
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=82.01 E-value=1.2 Score=44.73 Aligned_cols=32 Identities=28% Similarity=0.393 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCC--eEEEEeeCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~--~V~vlEk~~ 146 (631)
.|+|||+|..|.+.|..|++. |+ +|+++|...
T Consensus 2 kI~VIGaG~vG~~la~~la~~------g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLR------GSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCCH
Confidence 589999999999999999998 88 999999864
No 413
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=81.78 E-value=1.3 Score=44.78 Aligned_cols=34 Identities=26% Similarity=0.337 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCC--eEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~--~V~vlEk~~ 146 (631)
...|+|||+|..|.++|..|++. ++ +|+++|...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~------~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALR------QTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT------TCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCCh
Confidence 36899999999999999999998 77 899999764
No 414
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=81.65 E-value=0.43 Score=50.31 Aligned_cols=34 Identities=24% Similarity=0.395 Sum_probs=27.5
Q ss_pred cccce--EEEcCCCCeEEEEecCCccccccccccCCCCC
Q 006778 578 YAGPE--YVPDEKNQLKLQINAQNCLHCKACDIKDPKQN 614 (631)
Q Consensus 578 ~~~p~--~~~~~~~~~~~~~~~~~c~~c~tC~i~~p~~~ 614 (631)
-.||. ..++. .++.||.++|+.|+.|.-+||+..
T Consensus 282 ~~CPt~ai~~~~---~~l~Id~~~C~~Cg~Ci~~CP~al 317 (437)
T 3or1_A 282 GLCPTGCMTYES---GTLSIDNKNCTRCMHCINTMPRAL 317 (437)
T ss_dssp TTCTTCCEEEET---TEEEECGGGCCCCSHHHHHCTTTE
T ss_pred ccCcHHheeecC---CEEEEccccCCchhhhHhhCcHhh
Confidence 36787 55543 279999999999999999999854
No 415
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=81.57 E-value=1.1 Score=48.05 Aligned_cols=34 Identities=32% Similarity=0.335 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
...|+|+|+|..|.++|..|+.. |++|++.|+.+
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~------GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQA------GARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCH
Confidence 45699999999999999999999 99999998754
No 416
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=81.56 E-value=1.2 Score=45.24 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHH-HHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 109 DVVIVGAGPAGLS-AAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 109 DVvIVGgG~aGL~-aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
.|.|||.|.+|++ +|..|+++ |++|++.|+...
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~------G~~V~~~D~~~~ 39 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEA------GFEVSGCDAKMY 39 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHT------TCEEEEEESSCC
T ss_pred EEEEEEECHHHHHHHHHHHHhC------CCEEEEEcCCCC
Confidence 6999999999996 78888888 999999998753
No 417
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=81.39 E-value=1.5 Score=43.26 Aligned_cols=35 Identities=29% Similarity=0.446 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
...|+|+|+|-+|-++|..|++. |.+|+|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~------G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQ------GLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 45799999999999999999999 999999998754
No 418
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=81.38 E-value=1.4 Score=44.36 Aligned_cols=34 Identities=21% Similarity=0.459 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
.|.|||+|..|.+.|..|++. ..|.+|+++|+..
T Consensus 2 kI~VIGaG~vG~~la~~la~~----~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK----QLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCCh
Confidence 589999999999999999984 1178999999875
No 419
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=80.84 E-value=1.4 Score=45.36 Aligned_cols=34 Identities=24% Similarity=0.265 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
...|.|||+|.-|.+.|..|++. |.+|+++++.+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~------G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK------GQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT------TCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHC------CCeEEEEeCCH
Confidence 35799999999999999999999 99999999864
No 420
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=80.56 E-value=1.6 Score=44.87 Aligned_cols=33 Identities=27% Similarity=0.454 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
.|+|+|||..|..+|+.+++. |++|+++|..+.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~------G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKA------GMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCCC
Confidence 499999999999999999999 999999998764
No 421
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=80.44 E-value=1.7 Score=43.62 Aligned_cols=34 Identities=24% Similarity=0.390 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
...|.|||.|..|...|..|++. |++|+++++.+
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~------G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQ------GKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 45799999999999999999999 99999999875
No 422
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=80.37 E-value=1.5 Score=44.36 Aligned_cols=34 Identities=18% Similarity=0.137 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCC-CeEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVD-LSVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G-~~V~vlEk~~ 146 (631)
...|.|||.|..|.+.|..|++. | .+|+++++.+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~------G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGR------NAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT------TCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHc------CCCeEEEEeCCC
Confidence 45799999999999999999999 9 9999999875
No 423
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=80.26 E-value=10 Score=43.67 Aligned_cols=38 Identities=18% Similarity=-0.025 Sum_probs=30.5
Q ss_pred CCEEEEccCCccCCCCCCcchHHHHHHHHHHHHHHhcccCC
Q 006778 415 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 455 (631)
Q Consensus 415 ~~v~LiGDAA~~~~P~~g~G~~~Al~sa~~aA~~l~~~l~~ 455 (631)
+|++++|++.+... ..-++-|+++|..+|+.|.+.+..
T Consensus 794 grL~FAGE~Ts~~~---~gtveGAi~SG~RAA~~Il~~l~~ 831 (852)
T 2xag_A 794 PRLFFAGEHTIRNY---PATVHGALLSGLREAGRIADQFLG 831 (852)
T ss_dssp CCEEECSGGGCTTS---TTSHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcEEEEehhHhCCC---CcCHHHHHHHHHHHHHHHHHHhhC
Confidence 69999999977432 346899999999999999876543
No 424
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=80.14 E-value=1.5 Score=46.86 Aligned_cols=33 Identities=24% Similarity=0.206 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKG 145 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~ 145 (631)
...|+|||||..|...|..|.+. |.+|+|+++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~------ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEA------GARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------cCEEEEEcCC
Confidence 35699999999999999999999 9999999974
No 425
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=80.08 E-value=1.7 Score=43.76 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
..|.|||.|..|...|..|++. |++|+++++.+.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKN------GFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHC------CCeEEEEeCCHH
Confidence 4699999999999999999999 999999998764
No 426
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=80.02 E-value=1.7 Score=43.82 Aligned_cols=32 Identities=34% Similarity=0.492 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKG 145 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~ 145 (631)
..|.|||+|..|.+.|..|++. |+ +|+++|..
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~------g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK------ELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEecc
Confidence 4799999999999999999998 88 99999986
No 427
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=79.70 E-value=0.88 Score=35.17 Aligned_cols=25 Identities=16% Similarity=0.210 Sum_probs=22.1
Q ss_pred EEecCCccc--cccccccCCCCCccee
Q 006778 594 QINAQNCLH--CKACDIKDPKQNIKWT 618 (631)
Q Consensus 594 ~~~~~~c~~--c~tC~i~~p~~~i~w~ 618 (631)
.|+.+.|++ ||.|.-.||.+.|.+.
T Consensus 2 ~i~~~~C~~c~C~~C~~~Cp~~ai~~~ 28 (77)
T 1bc6_A 2 YVITEPCIGTKDASCVEVCPVDCIHEG 28 (77)
T ss_dssp EECCSTTTTCCCCSSTTTCTTCCEEEC
T ss_pred EEeCccCCCCCcchhHHhcccccEEeC
Confidence 367899999 9999999999999874
No 428
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=79.69 E-value=1.3 Score=47.01 Aligned_cols=32 Identities=25% Similarity=0.215 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
.|.|||+|..|+..|..|++. |++|+++++.+
T Consensus 2 kI~VIG~G~vG~~~A~~la~~------G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR------GHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT------TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHC------CCEEEEEECCH
Confidence 589999999999999999999 99999999865
No 429
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=79.63 E-value=1.4 Score=46.34 Aligned_cols=34 Identities=29% Similarity=0.379 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
...|+|||.|..|..+|..|+.. |.+|+++|+.+
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~------Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAM------GSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC------CCEEEEEeCCh
Confidence 46799999999999999999998 99999999764
No 430
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=79.59 E-value=1.4 Score=46.62 Aligned_cols=37 Identities=24% Similarity=0.328 Sum_probs=30.4
Q ss_pred cCccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 104 ESMAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 104 ~~~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
+.....|.|||+|..|+..|..|++ |.+|+++++.+.
T Consensus 33 ~~~~mkIaVIGlG~mG~~lA~~La~-------G~~V~~~D~~~~ 69 (432)
T 3pid_A 33 GSEFMKITISGTGYVGLSNGVLIAQ-------NHEVVALDIVQA 69 (432)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHT-------TSEEEEECSCHH
T ss_pred ccCCCEEEEECcCHHHHHHHHHHHc-------CCeEEEEecCHH
Confidence 3334579999999999999998885 899999998754
No 431
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=79.45 E-value=1.7 Score=43.13 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=30.6
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
.|.|||.|..|...|..|++. |++|+++++.+.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKA------GCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHC------CCeEEEEcCCHH
Confidence 599999999999999999999 999999998764
No 432
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=79.42 E-value=1.9 Score=43.67 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAE 147 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~~ 147 (631)
..|.|||+|..|.+.|..|++. |+ +|+++|....
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~------~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLK------ELGDVVLFDIAEG 42 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCch
Confidence 4799999999999999999998 77 9999998753
No 433
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=79.35 E-value=1.6 Score=43.61 Aligned_cols=34 Identities=12% Similarity=0.232 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~ 146 (631)
...|+|+|+|.+|.++|..|++. |. +|+|+.|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~------G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLST------AAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT------TCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHC------CCCEEEEEeCCH
Confidence 34699999999999999999998 98 999998864
No 434
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=79.02 E-value=1.6 Score=46.78 Aligned_cols=32 Identities=31% Similarity=0.502 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
.|.|||+|..|...|..|++. |++|+++|+.+
T Consensus 39 kV~VIGaG~MG~~iA~~la~~------G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARV------GISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTT------TCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhC------CCeEEEEECCH
Confidence 599999999999999999998 99999999875
No 435
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=79.01 E-value=0.53 Score=39.11 Aligned_cols=25 Identities=24% Similarity=0.433 Sum_probs=22.1
Q ss_pred EEecCCccccc--cccccCCCCCccee
Q 006778 594 QINAQNCLHCK--ACDIKDPKQNIKWT 618 (631)
Q Consensus 594 ~~~~~~c~~c~--tC~i~~p~~~i~w~ 618 (631)
.|+.+.|++|| .|.-.||.+.|.+.
T Consensus 2 ~~~~~~C~~C~~~~C~~~CP~~ai~~~ 28 (106)
T 7fd1_A 2 FVVTDNCIKCKYTDCVEVCPVDCFYEG 28 (106)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEEC
T ss_pred eECccccCCccCcHHHHHcCccceEcC
Confidence 36789999999 99999999999874
No 436
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=78.85 E-value=2 Score=41.48 Aligned_cols=34 Identities=21% Similarity=0.374 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
...|.|||+|-.|.+.|..|++. |++|+++++.+
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~------G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADL------GHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCh
Confidence 46799999999999999999998 99999999875
No 437
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=78.79 E-value=1.8 Score=44.61 Aligned_cols=34 Identities=18% Similarity=0.304 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
...|.|||.|..|...|..|++. |++|+++++.+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~------G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKG------GHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 46799999999999999999999 99999999875
No 438
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=78.78 E-value=1.3 Score=45.55 Aligned_cols=32 Identities=28% Similarity=0.428 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
.|.|||+|..|.+.|..|++. |++|+++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~------G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK------CREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT------EEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhC------CCEEEEEECCH
Confidence 799999999999999999998 99999999864
No 439
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=78.63 E-value=0.85 Score=43.70 Aligned_cols=34 Identities=21% Similarity=0.258 Sum_probs=29.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
...|+|+|+|..|...|..|.+. |. |+++|+.+.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~------g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS------EV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS------EE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhC------Ce-EEEEECCHH
Confidence 34699999999999999999988 99 999998753
No 440
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=78.54 E-value=1.6 Score=43.56 Aligned_cols=33 Identities=24% Similarity=0.363 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
+..|.|||+|.-|...|..|+ . |++|+++|+.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a------G~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S------KHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T------TSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c------CCEEEEEECCH
Confidence 467999999999999999999 8 99999999875
No 441
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=78.48 E-value=1.8 Score=43.64 Aligned_cols=33 Identities=24% Similarity=0.301 Sum_probs=29.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
...|.|||+|-.|.+.|..|++. |.+|+++ +.+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~------G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARA------GHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHT------TCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHC------CCeEEEE-EcH
Confidence 35699999999999999999998 9999999 653
No 442
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=78.26 E-value=1.8 Score=43.77 Aligned_cols=30 Identities=27% Similarity=0.288 Sum_probs=28.5
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEee
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEK 144 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk 144 (631)
.|.|||+|..|.+.|..|++. |.+|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~------g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN------GNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH------CCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhC------CCeEEEEEc
Confidence 489999999999999999999 999999998
No 443
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=78.24 E-value=1.8 Score=46.10 Aligned_cols=34 Identities=24% Similarity=0.397 Sum_probs=31.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
..|.|||+|.-|...|..|++. |++|+++|+.+.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a------G~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA------GIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCeEEEEECcHH
Confidence 3699999999999999999999 999999998764
No 444
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=78.14 E-value=2 Score=42.72 Aligned_cols=34 Identities=26% Similarity=0.419 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
...|.|||+|..|..+|..|+.. |.+|+++++..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~------G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAAL------GAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC------CCEEEEEECCH
Confidence 45799999999999999999998 99999999864
No 445
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=78.12 E-value=1.6 Score=47.01 Aligned_cols=34 Identities=29% Similarity=0.334 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
...|+|||.|..|..+|..|+.. |.+|+++|+.+
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~------Ga~Viv~d~~~ 307 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQ------GARVSVTEIDP 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred cCEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 45799999999999999999988 99999999864
No 446
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=78.04 E-value=2.1 Score=42.85 Aligned_cols=34 Identities=24% Similarity=0.389 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
...|.|||+|..|..+|..|+.. |.+|+++++..
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~------G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAAL------GANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHC------CCEEEEEECCH
Confidence 45799999999999999999998 99999999864
No 447
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=77.91 E-value=2.2 Score=40.29 Aligned_cols=33 Identities=30% Similarity=0.293 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|.|||+|-.|.+.|..|++. |.+|+++++..
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~------g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS------GFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 4699999999999999999998 99999999864
No 448
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=77.79 E-value=2.1 Score=42.00 Aligned_cols=33 Identities=9% Similarity=0.056 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|+|.|+|..|...+..|.+. |.+|+++.|..
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQ------GWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGG------TCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHC------CCEEEEEEcCh
Confidence 4699999999999999999998 99999999865
No 449
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=77.79 E-value=0.75 Score=43.07 Aligned_cols=55 Identities=20% Similarity=0.202 Sum_probs=39.6
Q ss_pred ecCCCCcccccCCccccceE-----------EE----cCCCCeEEEEecCCccccc--cccccCCCCCccee
Q 006778 564 LRDPKIPELVNLPEYAGPEY-----------VP----DEKNQLKLQINAQNCLHCK--ACDIKDPKQNIKWT 618 (631)
Q Consensus 564 ~~~~~~~~~~~~~~~~~p~~-----------~~----~~~~~~~~~~~~~~c~~c~--tC~i~~p~~~i~w~ 618 (631)
+.|.+.|..|..-+.+||.. +. .......+.++...|++|+ .|.-.||.+.|.+.
T Consensus 7 ~iD~~~CigC~~C~~aC~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~C~~C~~p~C~~~CP~gAi~~~ 78 (195)
T 2vpz_B 7 AIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVGEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQT 78 (195)
T ss_dssp EEETTTCCCCCHHHHHHHHHTCCCTTCCSEEEEEEEECCTTSCEEEEEEEECCCCSSCTTTTTCSSSCEEEC
T ss_pred EeeHHHCcChhHHHHHhhHhhcCCCCCceeEEEECcCCCCCceeEEECcccCcCccCcHHHHhcCCCceecc
Confidence 34788888876556677760 11 1112245778899999999 79999999999875
No 450
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=77.74 E-value=2 Score=43.44 Aligned_cols=32 Identities=25% Similarity=0.390 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCC--eEEEEeeCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~--~V~vlEk~~ 146 (631)
.|.|||+|-.|.+.|..|++. |+ +|+++|+..
T Consensus 2 kI~VIGaG~~G~~la~~l~~~------g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK------GFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCCCeEEEEeCCh
Confidence 589999999999999999998 88 999999864
No 451
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=77.60 E-value=1.6 Score=43.03 Aligned_cols=33 Identities=24% Similarity=0.334 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|+|+|+|-+|.+.|..|++. |.+|+|+.|..
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~------G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQA------QQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHT------TCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHC------CCEEEEEECCH
Confidence 4699999999999999999999 99999999864
No 452
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=77.59 E-value=1.7 Score=43.14 Aligned_cols=33 Identities=21% Similarity=0.320 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|.|||+|..|...|..|++. |.+|.++++.+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA------GYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhC------CCEEEEEeCCH
Confidence 4699999999999999999998 99999999864
No 453
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=77.27 E-value=2.1 Score=46.19 Aligned_cols=36 Identities=17% Similarity=0.357 Sum_probs=32.7
Q ss_pred ccccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 106 MAYDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 106 ~~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
|...|.|||.|..|...|..|++. |++|+++++.+.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~------G~~V~v~dr~~~ 44 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADH------GFTVCAYNRTQS 44 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSH
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHC------CCEEEEEeCCHH
Confidence 457899999999999999999999 999999998753
No 454
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=77.23 E-value=2.2 Score=43.54 Aligned_cols=33 Identities=21% Similarity=0.210 Sum_probs=28.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
-.|+|+|+|+.|+.++..++.. |.+|+++++.+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~~~~~ 210 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAM------GAEVSVFARNE 210 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT------TCEEEEECSSS
T ss_pred CEEEEECCcHHHHHHHHHHHHC------CCeEEEEeCCH
Confidence 4699999999999888777777 99999998765
No 455
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=77.16 E-value=2.6 Score=42.71 Aligned_cols=34 Identities=24% Similarity=0.253 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAE 147 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~~ 147 (631)
..|.|||+|..|.+.|..|++. ++ +|+++|....
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~------~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIK------QLGDVVLFDIAQG 40 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCChH
Confidence 4799999999999999999998 77 9999998753
No 456
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=77.04 E-value=1.7 Score=43.02 Aligned_cols=33 Identities=21% Similarity=0.245 Sum_probs=30.6
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
.|.|||.|..|...|..|++. |++|+++++.+.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~------G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRA------GFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHH------TCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHC------CCeEEEEcCCHH
Confidence 599999999999999999999 999999998764
No 457
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=76.94 E-value=2.3 Score=42.61 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
..|.|||+|..|...|..|++. |.+|+++++.+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~------g~~V~~~~~~~~ 64 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM------GHTVTVWNRTAE 64 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSGG
T ss_pred CeEEEEcccHHHHHHHHHHHhC------CCEEEEEeCCHH
Confidence 4799999999999999999998 999999998653
No 458
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=76.87 E-value=2.4 Score=43.47 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=28.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
-.|+|+|+|+.|+.++..++.. |.+|+++++.+
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~------Ga~Vi~~~~~~ 213 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAM------GAETYVISRSS 213 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCEEEEEESSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCH
Confidence 4699999999999988877777 99999999765
No 459
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=76.85 E-value=2.4 Score=39.60 Aligned_cols=32 Identities=28% Similarity=0.461 Sum_probs=29.2
Q ss_pred cEEEEC-CCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 109 DVVIVG-AGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 109 DVvIVG-gG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
.|+||| +|-.|...|..|++. |.+|.++++..
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~------g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATL------GHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT------TCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 489999 999999999999998 99999999864
No 460
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=76.81 E-value=1.6 Score=45.61 Aligned_cols=31 Identities=16% Similarity=0.146 Sum_probs=28.0
Q ss_pred ccEEEECCCHHHHHHHHHHHh-hcccCCCCCeEEEEee
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQ-LCREKNVDLSVCVVEK 144 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~-~~~~~~~G~~V~vlEk 144 (631)
..|.|||+|..|.+.|..|++ . |.+|+++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~------G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRD------GVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTST------TEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCC------CCEEEEEeC
Confidence 369999999999999999987 6 999999983
No 461
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=76.79 E-value=2.4 Score=42.77 Aligned_cols=34 Identities=18% Similarity=0.295 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~ 146 (631)
...++|+|+|-+|.++|..|++. |. +|+|+.|..
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~------Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALD------GVKEISIFNRKD 188 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT------TCSEEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHC------CCCEEEEEECCC
Confidence 35799999999999999999998 98 899999873
No 462
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=76.74 E-value=2.3 Score=42.53 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCC--eEEEEeeCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~--~V~vlEk~~ 146 (631)
.|.|||+|..|.+.|..|++. |+ +|+++|+.+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~------~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN------LDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------SCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCCCeEEEEECCh
Confidence 589999999999999999998 77 899999865
No 463
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=76.51 E-value=1.8 Score=42.89 Aligned_cols=35 Identities=23% Similarity=0.279 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGAE 147 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~~ 147 (631)
...|+|+|+|.+|.++|..|++. |. +|+|+.|...
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~------G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKI------VRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTT------CCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHC------CCCEEEEEeCCHH
Confidence 35799999999999999999998 98 8999988753
No 464
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=76.43 E-value=0.93 Score=50.29 Aligned_cols=56 Identities=25% Similarity=0.317 Sum_probs=38.1
Q ss_pred CCceEecCCCCccc--cc-CC-ccccce-------EEEcCCCCeEEEEecCCccccccccccCCCCCc
Q 006778 559 PAHLRLRDPKIPEL--VN-LP-EYAGPE-------YVPDEKNQLKLQINAQNCLHCKACDIKDPKQNI 615 (631)
Q Consensus 559 ~~h~~~~~~~~~~~--~~-~~-~~~~p~-------~~~~~~~~~~~~~~~~~c~~c~tC~i~~p~~~i 615 (631)
..+|-|.|.+.|.. |+ .. ...||- ...+++. .+-.|.-+-|+-||.|.-+||+..|
T Consensus 18 ~~~~~~~~~~~c~p~~c~~~~c~~~cp~~~~~~~~~~~~~~~-~~~~i~e~~c~gc~~~~~~~p~~~i 84 (607)
T 3bk7_A 18 KMRIAVIDYDKCNPDKCGHFLCERVCPVNRMGGEAIIIDEEN-YKPIIQEASCTGCGICVHKCPFNAI 84 (607)
T ss_dssp CEEEEECCGGGCCTTTSSSCHHHHHCHHHHTTCCSEEEETTT-TEEEECTTTCCCCCHHHHHCSSCCC
T ss_pred cceEEEeeccccCCCCCChhhHhhhCCCCcCCceEEEEcCCC-CcceeeecccCccccccCCCCcceE
Confidence 45677777777764 54 33 567887 3333332 2567778999999999999998543
No 465
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=76.30 E-value=2.6 Score=42.75 Aligned_cols=33 Identities=27% Similarity=0.416 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCC--eEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~--~V~vlEk~~ 146 (631)
..|.|||+|..|.+.|..|++. |+ +|+++|...
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~------~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ------GITDELVVIDVNK 40 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCceEEEEecch
Confidence 4699999999999999999998 77 899999753
No 466
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=76.23 E-value=3.3 Score=38.91 Aligned_cols=34 Identities=24% Similarity=0.303 Sum_probs=30.3
Q ss_pred ccEEEECC-CHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 108 YDVVIVGA-GPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 108 ~DVvIVGg-G~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
..|+|.|| |..|...+..|.+. |.+|+++.|.+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~------g~~V~~~~r~~~ 39 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNR------GFEVTAVVRHPE 39 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTT------TCEEEEECSCGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHC------CCEEEEEEcCcc
Confidence 36999996 99999999999998 999999998754
No 467
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=76.19 E-value=4.1 Score=40.58 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=30.3
Q ss_pred ccEEEECC-CHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 108 YDVVIVGA-GPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 108 ~DVvIVGg-G~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
..|+|+|| |..|...+..|.+. |.+|.++.|.+.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~ 46 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKL------GHPTYVFTRPNS 46 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHT------TCCEEEEECTTC
T ss_pred CeEEEECCCchHHHHHHHHHHHC------CCcEEEEECCCC
Confidence 46999997 99999999999998 999999998763
No 468
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=76.18 E-value=2.4 Score=41.82 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|+|||+|.+|.+.|..|.+. |.+|++++|..
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~------g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKE------GAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHc------CCEEEEEECCH
Confidence 5699999999999999999998 88999999864
No 469
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=76.02 E-value=2.4 Score=43.87 Aligned_cols=33 Identities=24% Similarity=0.342 Sum_probs=28.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~ 146 (631)
-.|+|+|+|+.|+.++..++.. |+ +|+++++.+
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~------Ga~~Vi~~~~~~ 228 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTA------GASRIIGIDIDS 228 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH------TCSCEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHc------CCCeEEEEcCCH
Confidence 4699999999999888877777 98 799998765
No 470
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=75.88 E-value=2.6 Score=41.05 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCe-EEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLS-VCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~-V~vlEk~~ 146 (631)
..|.|||+|-.|...|..|++. |++ |.++++.+
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~------g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK------GFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHC------CCeEEEEEeCCH
Confidence 4699999999999999999998 998 88998764
No 471
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=75.79 E-value=1.8 Score=44.88 Aligned_cols=34 Identities=24% Similarity=0.325 Sum_probs=31.2
Q ss_pred cccEEEECC-CHHHHHHHHHHHhhcccCCCCC---eEEEEeeCC
Q 006778 107 AYDVVIVGA-GPAGLSAAIRLKQLCREKNVDL---SVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGg-G~aGL~aA~~La~~~~~~~~G~---~V~vlEk~~ 146 (631)
...|+|||| |.+|+.|+..+... |+ .|+++|.+.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~l------Ga~~~~V~v~D~~~ 251 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKV------GIPDANILKWDIKE 251 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT------TCCGGGEEEECHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhC------CCCcCceEEeeccc
Confidence 568999999 99999999999999 98 999999875
No 472
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=75.60 E-value=2.7 Score=40.98 Aligned_cols=32 Identities=34% Similarity=0.488 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~ 146 (631)
.|+|||+|-+|-+++..|.+. |. +|+|+.|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~------G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM------GVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT------TCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHc------CCCEEEEEeCCH
Confidence 799999999999999999998 88 899999864
No 473
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=75.57 E-value=2.2 Score=42.45 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|.|||+|-.|...|..|++. |++|+++++.+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE------GVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT------TCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHC------CCeEEEEeCCH
Confidence 4699999999999999999998 99999999864
No 474
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=75.47 E-value=2.7 Score=42.33 Aligned_cols=32 Identities=28% Similarity=0.470 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCC--eEEEEeeCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~--~V~vlEk~~ 146 (631)
.|.|||+|..|.+.|..|++. |+ +|+++|...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~------~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ------DVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------TCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCch
Confidence 589999999999999999998 76 899999875
No 475
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=75.41 E-value=2.6 Score=41.82 Aligned_cols=34 Identities=29% Similarity=0.309 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~ 146 (631)
...|+|+|+|-+|.++|..|++. |. +|+|+.|..
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~------G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTH------GVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHC------CCCEEEEEECCH
Confidence 35799999999999999999998 98 699998764
No 476
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=75.26 E-value=0.81 Score=35.50 Aligned_cols=25 Identities=16% Similarity=0.235 Sum_probs=22.2
Q ss_pred EEecCCccc--cccccccCCCCCccee
Q 006778 594 QINAQNCLH--CKACDIKDPKQNIKWT 618 (631)
Q Consensus 594 ~~~~~~c~~--c~tC~i~~p~~~i~w~ 618 (631)
.|+.+.|++ ||.|.-.||.+.|.+.
T Consensus 2 ~i~~~~C~~c~C~~C~~~CP~~ai~~~ 28 (78)
T 1h98_A 2 HVICEPCIGVKDQSCVEVCPVECIYDG 28 (78)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEEC
T ss_pred EEEchhCCCCCcChhhhhcCccceEcC
Confidence 367899999 9999999999999875
No 477
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=75.25 E-value=2 Score=43.80 Aligned_cols=34 Identities=24% Similarity=0.141 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCC-------CeEEEEeeCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVD-------LSVCVVEKGAE 147 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G-------~~V~vlEk~~~ 147 (631)
..|.|||+|..|.+.|..|++. | .+|+++++.+.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~------g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN------AAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH------HHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhc------CCcccCCCCeEEEEEcChh
Confidence 4699999999999999999998 8 89999998764
No 478
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=75.18 E-value=0.72 Score=42.27 Aligned_cols=24 Identities=21% Similarity=0.479 Sum_probs=20.5
Q ss_pred ecCCccccccccccCCCCCcceeC
Q 006778 596 NAQNCLHCKACDIKDPKQNIKWTV 619 (631)
Q Consensus 596 ~~~~c~~c~tC~i~~p~~~i~w~~ 619 (631)
+.+.|+.|+.|...||++.|.+..
T Consensus 49 d~~~Ci~C~~C~~~CP~~ai~~~~ 72 (182)
T 3i9v_9 49 GLEKCIGCSLCAAACPAYAIYVEP 72 (182)
T ss_dssp SCBSCCCCCHHHHHCTTCCEEEEE
T ss_pred CCccCcccccchhhCCcccEEeec
Confidence 367999999999999999997543
No 479
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=75.15 E-value=2.8 Score=42.35 Aligned_cols=33 Identities=24% Similarity=0.475 Sum_probs=29.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCC--eEEEEeeC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKG 145 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~--~V~vlEk~ 145 (631)
...|+|||+|..|.++|..|++. ++ +|.++|..
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~------~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQ------SIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------CSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCC
Confidence 46899999999999999999987 64 89999865
No 480
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=75.04 E-value=3.2 Score=40.70 Aligned_cols=34 Identities=29% Similarity=0.427 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAE 147 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~ 147 (631)
..|+|.|+|..|...+..|.+. |.+|+++.|...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQ------GHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCcc
Confidence 3699999999999999999998 999999998754
No 481
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=75.00 E-value=2.6 Score=43.50 Aligned_cols=33 Identities=18% Similarity=0.184 Sum_probs=28.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
-.|+|+|+|+.|+.++..++.. |.+|+++++.+
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~------Ga~Vi~~~~~~ 228 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAM------GAHVVAFTTSE 228 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSG
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 3599999999999888777777 99999999764
No 482
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=74.97 E-value=2.9 Score=42.84 Aligned_cols=33 Identities=21% Similarity=0.216 Sum_probs=28.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
-.|+|+|+|+.|+.++..++.. |.+|+++++.+
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~~------Ga~Vi~~~~~~ 214 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKAM------GHHVTVISSSN 214 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCh
Confidence 3699999999999988877777 99999999765
No 483
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=74.95 E-value=2.4 Score=43.84 Aligned_cols=34 Identities=12% Similarity=0.050 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCC-------CeEEEEeeCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVD-------LSVCVVEKGAE 147 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G-------~~V~vlEk~~~ 147 (631)
..|.|||+|-.|.+.|..|++. | .+|+++++.+.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~------G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTN------AKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHH------HHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHc------CCccCCCCCeEEEEECChh
Confidence 3699999999999999999998 8 89999998764
No 484
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=74.79 E-value=2.5 Score=44.26 Aligned_cols=34 Identities=29% Similarity=0.389 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~ 146 (631)
...|+|||+|..|..+|..|+.. |. +|+++++..
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~------G~~~V~v~~r~~ 201 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDR------GVRAVLVANRTY 201 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHH------CCSEEEEECSSH
T ss_pred CCEEEEEChHHHHHHHHHHHHHC------CCCEEEEEeCCH
Confidence 35699999999999999999998 98 899998764
No 485
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=74.74 E-value=3 Score=42.00 Aligned_cols=33 Identities=27% Similarity=0.324 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCC--eEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~--~V~vlEk~~ 146 (631)
..|.|||.|..|.+.|..|++. |. +|+++++.+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~------G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS------GFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT------TCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhC------CCCCEEEEEECCH
Confidence 5799999999999999999998 98 999999875
No 486
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=74.64 E-value=1.5 Score=41.63 Aligned_cols=33 Identities=24% Similarity=0.431 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEE-EeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCV-VEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~v-lEk~~ 146 (631)
..|.|||+|-.|.+.|..|++. |.+|++ +++.+
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~------g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA------QIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT------TCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCCH
Confidence 4799999999999999999998 999998 77765
No 487
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=74.56 E-value=2.4 Score=42.79 Aligned_cols=33 Identities=24% Similarity=0.395 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|.|||.|..|...|..|++. |++|+++++.+
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA------GYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT------TCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhC------CCeEEEEcCCH
Confidence 4799999999999999999999 99999999875
No 488
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=74.55 E-value=2.7 Score=46.09 Aligned_cols=51 Identities=18% Similarity=0.279 Sum_probs=38.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCCCCCC---ccccccccChHhHH
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGAEVGA---HIISGNVFEPRALN 164 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~~~g~---~~~~g~~i~~~~l~ 164 (631)
-.|+|||+|..|...|..|.+. |.+|+++|+.+..-. ....|...+...|.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~------g~~v~vid~d~~~~~~~~~~i~gD~t~~~~L~ 402 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK------PVPFILIDRQESPVCNDHVVVYGDATVGQTLR 402 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCCSSCCSSCEEESCSSSSTHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHC------CCCEEEEECChHHHhhcCCEEEeCCCCHHHHH
Confidence 5799999999999999999999 999999998875321 23344444444443
No 489
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=74.52 E-value=0.69 Score=53.07 Aligned_cols=57 Identities=11% Similarity=-0.211 Sum_probs=39.2
Q ss_pred CceEecCCCCcccccCCccccce------EEEcCCCCeEEEEecC----CccccccccccCCCCCccee
Q 006778 560 AHLRLRDPKIPELVNLPEYAGPE------YVPDEKNQLKLQINAQ----NCLHCKACDIKDPKQNIKWT 618 (631)
Q Consensus 560 ~h~~~~~~~~~~~~~~~~~~~p~------~~~~~~~~~~~~~~~~----~c~~c~tC~i~~p~~~i~w~ 618 (631)
+.|.+ |++.|..|..-+..||+ +...+.+. ...|+.. .|..||.|.-.||++.|+-.
T Consensus 172 p~i~~-d~~~CI~C~~Cv~~C~~~~~~~~i~~~~~g~-~~~i~~~~~~~~C~~CG~Cv~vCP~gAl~~~ 238 (783)
T 3i9v_3 172 PFVIL-DRERCIHCKRCVRYFEEVPGDEVLDFIERGV-HTFIGTMDFGLPSGFSGNITDICPVGALLDL 238 (783)
T ss_dssp TTEEE-CTTTCCCCCHHHHHHHHTTCCCCCEECSCTT-SCCEECSSTTCCSTTTTTHHHHCSSSSEEEG
T ss_pred ccEEE-chhhCCCccHHHHHhhhhcCCceeeeecCCC-ccEEccCCCCCCCccchhHHhhcccCceecc
Confidence 45655 88999999877788865 22222221 1234443 79999999999999998643
No 490
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=74.34 E-value=3.1 Score=40.32 Aligned_cols=34 Identities=12% Similarity=0.163 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCC----CeEEEEeeCCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVD----LSVCVVEKGAE 147 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G----~~V~vlEk~~~ 147 (631)
..|.|||+|-.|.+.|..|++. | .+|+++++.+.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~------g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA------NIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH------TSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCCCCCeEEEEeCCcc
Confidence 3699999999999999999998 8 79999998764
No 491
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=74.33 E-value=3.3 Score=38.53 Aligned_cols=32 Identities=28% Similarity=0.346 Sum_probs=29.2
Q ss_pred cEEEECC-CHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 109 DVVIVGA-GPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 109 DVvIVGg-G~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
.|+|.|| |..|..++..|.+. |.+|+++.|.+
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNR------GHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhC------CCEEEEEEcCc
Confidence 4899996 99999999999998 99999999875
No 492
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=74.32 E-value=2.7 Score=43.21 Aligned_cols=33 Identities=27% Similarity=0.283 Sum_probs=28.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
-.|+|+|+|+.|+.++..++.. |.+|+++++.+
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~------Ga~Vi~~~~~~ 221 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAF------GSKVTVISTSP 221 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCG
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH
Confidence 4699999999999998888877 99999998764
No 493
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=74.18 E-value=2.6 Score=41.77 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~ 146 (631)
...|+|+|+|-+|-++|..|++. |. +|+|+.|..
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~------G~~~v~v~nRt~ 156 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDN------FAKDIYVVTRNP 156 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHT------TCSEEEEEESCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHc------CCCEEEEEeCCH
Confidence 45799999999999999999998 98 899998764
No 494
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=74.17 E-value=2.9 Score=41.02 Aligned_cols=32 Identities=25% Similarity=0.257 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
.|.|||+|..|.+.|..|++. |++|+++++.+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR------GHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHC------CCEEEEEECCH
Confidence 489999999999999999998 99999998764
No 495
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=74.17 E-value=2.3 Score=42.24 Aligned_cols=32 Identities=25% Similarity=0.430 Sum_probs=28.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCCCeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVDLSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G~~V~vlEk~~ 146 (631)
..|+|+|+|-+|.+.|..|++. | +|+++.|..
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~------G-~V~v~~r~~ 160 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKD------N-NIIIANRTV 160 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSS------S-EEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHC------C-CEEEEECCH
Confidence 4699999999999999999998 9 999998753
No 496
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=74.06 E-value=2.7 Score=42.42 Aligned_cols=33 Identities=15% Similarity=0.201 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhhcccCCCC----CeEEEEeeCC
Q 006778 108 YDVVIVGAGPAGLSAAIRLKQLCREKNVD----LSVCVVEKGA 146 (631)
Q Consensus 108 ~DVvIVGgG~aGL~aA~~La~~~~~~~~G----~~V~vlEk~~ 146 (631)
..|.|||+|-.|.+.|..|++. | .+|+++++..
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~------G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAA------GVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHT------TSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCCcceEEEECCCc
Confidence 4799999999999999999998 8 7999999875
No 497
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=73.99 E-value=2.9 Score=41.93 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCC--CeEEEEeeCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVD--LSVCVVEKGA 146 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G--~~V~vlEk~~ 146 (631)
.|.|||+|-.|.+.|..|++. | .+|+++++..
T Consensus 3 kI~VIGaG~~G~~la~~L~~~------g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQ------GVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC------CCCCEEEEEcCCH
Confidence 599999999999999999998 8 6899999864
No 498
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=73.90 E-value=2.7 Score=40.90 Aligned_cols=34 Identities=24% Similarity=0.425 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCC-eEEEEeeCC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL-SVCVVEKGA 146 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~-~V~vlEk~~ 146 (631)
...|+|||+|-.|..+|..|++. |+ +++|+|...
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~------Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGA------GVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHT------TCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHc------CCCeEEEEeCCC
Confidence 46899999999999999999999 87 788888754
No 499
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=73.71 E-value=3.2 Score=41.90 Aligned_cols=33 Identities=30% Similarity=0.430 Sum_probs=29.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhhcccCCCCC--eEEEEeeC
Q 006778 107 AYDVVIVGAGPAGLSAAIRLKQLCREKNVDL--SVCVVEKG 145 (631)
Q Consensus 107 ~~DVvIVGgG~aGL~aA~~La~~~~~~~~G~--~V~vlEk~ 145 (631)
...|+|||+|..|.+.|..|+.. ++ +++++|..
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~------~~~~el~L~Di~ 39 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQ------GIAEEFVIVDVV 39 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHcC------CCCCEEEEEeCC
Confidence 46799999999999999999987 65 89999974
No 500
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=73.60 E-value=3.1 Score=40.34 Aligned_cols=32 Identities=22% Similarity=0.390 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHhhcccCCCC-CeEEEEeeCC
Q 006778 109 DVVIVGAGPAGLSAAIRLKQLCREKNVD-LSVCVVEKGA 146 (631)
Q Consensus 109 DVvIVGgG~aGL~aA~~La~~~~~~~~G-~~V~vlEk~~ 146 (631)
.|.|||+|-.|.+.|..|++. | .+|+++++.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~------g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ------GGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH------CSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHC------CCCeEEEECCCH
Confidence 489999999999999999998 9 9999999864
Done!