Query 006787
Match_columns 631
No_of_seqs 613 out of 3429
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 08:57:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006787.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006787hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3icu_A E3 ubiquitin-protein li 99.9 3.9E-22 1.3E-26 190.7 19.2 144 36-189 30-186 (194)
2 1z1y_A Ookinete surface protei 99.6 8.6E-17 2.9E-21 155.0 5.5 148 388-565 10-177 (186)
3 1yo8_A Thrombospondin-2; EGF, 99.6 4.7E-16 1.6E-20 173.9 10.4 119 424-566 2-145 (634)
4 2w86_A Fibrillin-1, fibrillin1 99.6 1.3E-16 4.5E-21 147.8 3.8 124 423-566 2-147 (147)
5 2vj3_A Neurogenic locus notch 99.6 3E-15 1E-19 136.6 11.0 112 424-566 4-118 (135)
6 1dx5_I Thrombomodulin; serine 99.6 6.8E-16 2.3E-20 137.4 6.3 113 424-565 3-118 (118)
7 2bou_A EGF-like module contain 99.6 1.5E-15 5.2E-20 139.9 7.7 111 442-568 11-139 (143)
8 1uzk_A Fibrillin-1; glycoprote 99.6 6.3E-16 2.2E-20 145.6 5.3 124 424-566 2-162 (162)
9 4d90_A EGF-like repeat and dis 99.5 7.8E-14 2.7E-18 128.2 7.9 109 426-557 1-127 (143)
10 1yo8_A Thrombospondin-2; EGF, 99.4 3E-13 1E-17 151.3 12.3 112 401-535 24-161 (634)
11 1z1y_A Ookinete surface protei 99.4 1.1E-13 3.7E-18 133.3 5.8 109 444-568 16-137 (186)
12 1lmj_A Fibrillin 1; EGF, calci 99.4 1.1E-13 3.8E-18 115.9 4.8 79 478-566 3-86 (86)
13 1emn_A Fibrillin; extracellula 99.4 2.5E-13 8.6E-18 112.7 6.3 80 472-565 1-81 (82)
14 2w2n_E LDL receptor, low-densi 99.3 2.1E-13 7.3E-18 118.9 2.2 80 472-566 26-107 (107)
15 1z6c_A Vitamin K-dependent pro 99.3 2.5E-12 8.4E-17 107.9 4.1 79 478-568 3-86 (87)
16 2bou_A EGF-like module contain 99.2 1E-11 3.6E-16 114.1 6.7 107 402-529 19-143 (143)
17 1aut_L Activated protein C; se 99.1 5.4E-11 1.8E-15 105.0 7.0 87 473-569 3-96 (114)
18 1x7a_L Coagulation factor IX, 99.1 4.2E-11 1.4E-15 110.4 5.6 83 471-569 43-128 (146)
19 1lmj_A Fibrillin 1; EGF, calci 99.1 1.1E-10 3.7E-15 97.5 5.3 77 424-519 2-80 (86)
20 2vj3_A Neurogenic locus notch 99.0 2.2E-10 7.4E-15 104.2 7.1 102 400-535 26-132 (135)
21 3p5b_L Low density lipoprotein 99.0 9E-11 3.1E-15 126.3 5.0 79 479-569 1-81 (400)
22 1n7d_A LDL receptor, low-densi 99.0 8E-10 2.7E-14 127.4 10.8 105 444-568 266-374 (699)
23 3v65_B Low-density lipoprotein 99.0 1.1E-10 3.6E-15 125.2 2.8 80 478-569 3-85 (386)
24 1nfu_B Coagulation factor XA, 99.0 1.7E-10 6E-15 110.9 3.6 82 472-569 38-123 (195)
25 1x7a_L Coagulation factor IX, 99.0 4.1E-10 1.4E-14 103.7 6.0 84 416-528 43-130 (146)
26 1tpg_A T-plasminogen activator 99.0 2.1E-10 7.3E-15 96.8 3.7 80 452-566 1-85 (91)
27 1emn_A Fibrillin; extracellula 99.0 1.1E-09 3.8E-14 90.5 7.4 73 424-519 4-77 (82)
28 2vh0_B Activated factor XA lig 99.0 2.5E-10 8.6E-15 103.6 3.6 82 472-569 38-123 (134)
29 3m0c_C LDL receptor, low-densi 98.9 5.6E-10 1.9E-14 129.8 7.0 106 444-569 284-393 (791)
30 1z6c_A Vitamin K-dependent pro 98.9 6.1E-10 2.1E-14 93.2 5.2 81 424-526 2-87 (87)
31 3iib_A Peptidase M28; YP_92679 98.9 1.2E-08 4.2E-13 111.0 14.6 112 61-188 96-225 (444)
32 1aut_L Activated protein C; se 98.9 1.8E-09 6E-14 95.2 5.7 93 424-542 5-107 (114)
33 2ek8_A Aminopeptidase; metallo 98.8 2.1E-08 7.1E-13 108.6 14.2 102 68-188 90-195 (421)
34 2c4f_L Coagulation factor VII 98.8 1.6E-09 5.6E-14 99.2 4.3 82 472-569 43-131 (142)
35 2w2n_E LDL receptor, low-densi 98.8 2.2E-09 7.4E-14 93.4 4.5 77 415-519 24-101 (107)
36 3h5c_B Vitamin K-dependent pro 98.8 5.3E-09 1.8E-13 108.8 7.3 76 479-568 6-85 (317)
37 3v65_B Low-density lipoprotein 98.7 2.3E-09 7.7E-14 114.8 1.9 82 424-527 2-86 (386)
38 3p5b_L Low density lipoprotein 98.7 1.8E-08 6.3E-13 108.2 8.1 79 426-527 1-82 (400)
39 2c4f_L Coagulation factor VII 98.7 1.4E-08 4.9E-13 93.0 6.0 80 424-527 46-132 (142)
40 1nfu_B Coagulation factor XA, 98.7 3.1E-09 1.1E-13 102.2 1.0 87 417-535 38-128 (195)
41 1uzk_A Fibrillin-1; glycoprote 98.7 3.8E-09 1.3E-13 99.0 1.3 104 399-522 21-161 (162)
42 4d90_A EGF-like repeat and dis 98.6 3E-08 1E-12 90.6 6.6 89 401-518 22-129 (143)
43 2vh0_B Activated factor XA lig 98.6 4.6E-09 1.6E-13 95.3 1.0 83 417-527 38-124 (134)
44 3h5c_B Vitamin K-dependent pro 98.6 2E-08 6.8E-13 104.4 5.7 81 424-529 4-89 (317)
45 4fbr_A Lectin, myxobacterial h 98.6 1.2E-09 4E-14 109.3 -5.8 118 415-557 93-263 (267)
46 2vj2_A Jagged-1; signalling, p 98.6 5E-08 1.7E-12 92.0 5.6 110 403-557 51-163 (169)
47 3fed_A Glutamate carboxypeptid 98.5 1.6E-07 5.5E-12 107.0 9.2 107 67-178 123-268 (707)
48 1tpg_A T-plasminogen activator 98.4 1.3E-07 4.5E-12 79.6 4.8 84 402-527 2-90 (91)
49 3m0c_C LDL receptor, low-densi 98.4 3E-07 1E-11 106.9 8.1 82 425-529 312-396 (791)
50 3kas_A Transferrin receptor pr 98.4 6E-07 2.1E-11 101.3 10.2 104 68-177 105-230 (640)
51 1apq_A Complement protease C1R 98.4 2.5E-07 8.7E-12 69.4 4.7 42 523-567 2-52 (53)
52 2w86_A Fibrillin-1, fibrillin1 98.4 6E-08 2E-12 89.2 0.6 100 399-519 21-141 (147)
53 1dx5_I Thrombomodulin; serine 98.3 1.2E-07 4.2E-12 83.8 1.9 86 400-518 22-111 (118)
54 4fbr_A Lectin, myxobacterial h 98.3 1.3E-08 4.4E-13 101.8 -5.9 102 442-558 42-197 (267)
55 1kli_L Factor VIIA; extrinsic 98.3 6.8E-07 2.3E-11 70.9 4.5 48 424-483 4-52 (69)
56 1n7d_A LDL receptor, low-densi 98.2 8.9E-07 3E-11 101.9 6.4 81 424-527 293-376 (699)
57 2jkh_L Factor X light chain; p 98.2 9.6E-07 3.3E-11 66.8 4.2 45 426-482 2-46 (55)
58 3fcs_B Integrin beta-3; beta p 98.2 2.4E-06 8.4E-11 97.0 8.2 117 404-558 460-595 (690)
59 1kli_L Factor VIIA; extrinsic 98.1 1.5E-06 5.2E-11 68.9 4.3 46 522-570 2-49 (69)
60 2jkh_L Factor X light chain; p 98.1 1.4E-06 4.8E-11 65.9 3.9 43 525-570 1-44 (55)
61 2ygq_A WIF-1, WNT inhibitory f 98.1 1.6E-06 5.5E-11 90.2 5.1 105 402-557 165-270 (324)
62 2ygq_A WIF-1, WNT inhibitory f 98.0 1.3E-06 4.3E-11 91.0 2.5 112 402-568 197-309 (324)
63 1edm_B Factor IX; epidermal gr 97.9 7.3E-06 2.5E-10 57.1 4.1 32 524-557 2-33 (39)
64 3fcs_B Integrin beta-3; beta p 97.9 5.4E-06 1.9E-10 94.1 5.1 101 427-559 436-556 (690)
65 3i6s_A Subtilisin-like proteas 97.9 1.2E-05 4.2E-10 91.1 7.8 93 75-188 261-356 (649)
66 1kig_L Factor XA; glycoprotein 97.9 6.8E-06 2.3E-10 61.0 3.5 42 428-481 1-42 (51)
67 2kl7_A Fibulin-4; secreted, ca 97.9 6.9E-06 2.3E-10 65.5 3.7 28 523-551 1-29 (71)
68 3u7u_G Neuregulin 1; signaling 97.8 1.5E-05 5E-10 60.0 4.2 42 521-568 3-50 (55)
69 2k2s_B Micronemal protein 6; m 97.8 8.5E-06 2.9E-10 62.7 3.0 35 521-557 7-43 (61)
70 2bz6_L Blood coagulation facto 97.8 1.5E-05 5E-10 59.7 4.0 43 428-482 2-45 (53)
71 1apq_A Complement protease C1R 97.7 2.4E-05 8.1E-10 58.4 4.1 42 424-475 3-52 (53)
72 2gy5_A Angiopoietin-1 receptor 97.7 5.5E-05 1.9E-09 81.5 8.3 123 401-567 184-320 (423)
73 1kig_L Factor XA; glycoprotein 97.7 1.6E-05 5.5E-10 59.0 2.9 36 532-570 6-41 (51)
74 2wph_E Coagulation factor IXA 97.7 5E-05 1.7E-09 58.1 5.5 39 428-476 2-41 (59)
75 1gl4_A Nidogen-1, entactin; im 97.6 1.3E-05 4.6E-10 80.5 1.6 43 523-568 3-46 (285)
76 1xf1_A C5A peptidase, SCP; hyd 97.6 0.0002 7E-09 84.6 10.8 64 99-174 279-343 (926)
77 1y9z_A Alkaline serine proteas 97.5 0.00018 6.1E-09 78.1 9.1 76 98-185 271-355 (441)
78 2bz6_L Blood coagulation facto 97.5 6.7E-05 2.3E-09 56.1 3.8 40 528-570 2-43 (53)
79 3k6s_B Integrin beta-2; cell r 97.5 5.7E-05 1.9E-09 85.6 4.4 88 442-558 486-587 (687)
80 1szb_A Mannose binding lectin- 97.4 7E-05 2.4E-09 70.2 3.6 52 513-568 113-168 (170)
81 2wph_E Coagulation factor IXA 97.4 0.00011 3.6E-09 56.3 3.9 39 528-569 2-42 (59)
82 1egf_A Epidermal growth factor 97.4 0.00012 4E-09 54.7 3.9 39 524-567 2-44 (53)
83 2vj2_A Jagged-1; signalling, p 97.4 9.7E-05 3.3E-09 69.3 3.7 79 402-518 83-165 (169)
84 1gl4_A Nidogen-1, entactin; im 97.2 4.3E-05 1.5E-09 76.8 -0.1 46 424-481 4-49 (285)
85 1edm_B Factor IX; epidermal gr 97.2 0.00015 5E-09 50.4 2.7 29 424-459 2-30 (39)
86 2kl7_A Fibulin-4; secreted, ca 97.2 0.00025 8.7E-09 56.3 4.1 40 424-469 2-41 (71)
87 3u7u_G Neuregulin 1; signaling 97.2 0.00021 7.1E-09 53.7 2.9 43 416-475 2-49 (55)
88 1n1i_A Merozoite surface prote 97.1 0.00093 3.2E-08 56.2 6.4 69 499-568 22-96 (105)
89 3v64_C Agrin; beta propeller, 96.9 0.00035 1.2E-08 73.2 3.0 42 525-569 1-42 (349)
90 1ob1_C Major merozoite surface 96.9 0.00074 2.5E-08 56.4 4.3 58 499-557 16-83 (99)
91 1nzi_A Complement C1S componen 96.9 0.00066 2.3E-08 62.6 4.4 51 513-567 106-158 (159)
92 2gy5_A Angiopoietin-1 receptor 96.9 0.00086 3E-08 72.1 5.7 80 451-558 183-273 (423)
93 3ca7_A Protein spitz; argos, E 96.8 0.00021 7.1E-09 53.1 0.4 42 507-567 3-48 (52)
94 2k2s_B Micronemal protein 6; m 96.8 0.00027 9.3E-09 54.2 0.9 44 424-482 10-55 (61)
95 1n1i_A Merozoite surface prote 96.8 0.0018 6.3E-08 54.4 5.9 61 442-516 20-84 (105)
96 1a3p_A Epidermal growth factor 96.6 0.0015 5.3E-08 46.7 3.7 36 527-567 2-41 (45)
97 1k36_A Epiregulin; EGF-like fo 96.6 0.0012 4.1E-08 47.6 3.0 38 524-567 2-43 (46)
98 1ob1_C Major merozoite surface 96.5 0.0024 8.1E-08 53.4 4.8 63 442-516 14-83 (99)
99 1egf_A Epidermal growth factor 96.4 0.0022 7.4E-08 47.7 3.6 40 424-475 2-44 (53)
100 1hae_A Heregulin-alpha; growth 96.3 0.0015 5.1E-08 50.5 2.3 36 525-566 6-46 (63)
101 2wg3_C Hedgehog-interacting pr 96.3 0.00062 2.1E-08 74.2 -0.1 55 499-568 402-456 (463)
102 3k6s_B Integrin beta-2; cell r 96.2 0.0036 1.2E-07 70.9 5.6 89 442-559 439-549 (687)
103 1szb_A Mannose binding lectin- 96.2 0.003 1E-07 58.9 4.1 43 424-476 123-168 (170)
104 3f1s_B Vitamin K-dependent pro 96.0 0.004 1.4E-07 63.1 4.3 46 425-482 2-48 (283)
105 3f1s_B Vitamin K-dependent pro 96.0 0.0029 1E-07 64.1 3.2 42 524-568 1-44 (283)
106 3v64_C Agrin; beta propeller, 95.6 0.0057 2E-07 63.8 3.4 41 425-476 1-41 (349)
107 1nql_B Epidermal growth factor 95.5 0.0065 2.2E-07 45.1 2.3 31 532-567 12-44 (53)
108 2p28_B Integrin beta-2; hybrid 95.4 0.013 4.5E-07 56.9 5.1 92 442-566 100-213 (217)
109 1k36_A Epiregulin; EGF-like fo 95.4 0.0059 2E-07 43.9 1.9 37 424-475 2-43 (46)
110 4aqs_A Laminin subunit beta-1; 95.4 0.0046 1.6E-07 68.4 2.0 53 506-566 459-524 (525)
111 1hae_A Heregulin-alpha; growth 95.3 0.01 3.5E-07 45.7 3.1 44 425-483 6-54 (63)
112 1a3p_A Epidermal growth factor 95.3 0.011 3.9E-07 42.1 3.0 37 427-475 2-41 (45)
113 1g1s_A P-selectin; selectin, l 95.0 0.0085 2.9E-07 55.1 2.1 30 499-530 131-161 (162)
114 1ijq_A LDL receptor, low-densi 94.9 0.018 6.3E-07 58.9 4.6 41 524-567 266-316 (316)
115 1g1s_A P-selectin; selectin, l 94.6 0.014 4.8E-07 53.6 2.5 43 425-483 119-161 (162)
116 1nzi_A Complement C1S componen 94.5 0.022 7.6E-07 52.1 3.7 42 424-475 116-158 (159)
117 2wg3_C Hedgehog-interacting pr 94.4 0.011 3.7E-07 64.4 1.5 75 404-523 379-454 (463)
118 4a0p_A LRP6, LRP-6, low-densit 94.3 0.026 8.8E-07 63.8 4.3 42 524-568 264-307 (628)
119 1q4g_A Prostaglandin G/H synth 94.0 0.025 8.7E-07 62.6 3.3 38 524-567 1-40 (553)
120 3s94_A LRP-6, low-density lipo 93.2 0.047 1.6E-06 61.6 3.9 41 524-567 577-618 (619)
121 1ijq_A LDL receptor, low-densi 93.1 0.061 2.1E-06 54.9 4.3 41 424-474 266-315 (316)
122 3sov_A LRP-6, low-density lipo 92.5 0.078 2.7E-06 54.4 4.0 41 525-568 267-310 (318)
123 3nt1_A Prostaglandin-endoperox 92.4 0.066 2.3E-06 59.5 3.5 37 525-567 1-39 (587)
124 4a0p_A LRP6, LRP-6, low-densit 92.4 0.067 2.3E-06 60.4 3.7 43 424-476 264-307 (628)
125 3sov_A LRP-6, low-density lipo 92.2 0.073 2.5E-06 54.6 3.4 42 425-476 267-310 (318)
126 3s94_A LRP-6, low-density lipo 91.5 0.096 3.3E-06 59.0 3.6 42 424-475 577-618 (619)
127 1nql_B Epidermal growth factor 89.7 0.21 7.2E-06 36.8 2.9 30 434-475 13-44 (53)
128 3ltf_D Protein spitz; receptor 89.7 0.15 5E-06 38.4 2.1 31 533-568 15-49 (58)
129 1klo_A Laminin; glycoprotein; 88.8 0.65 2.2E-05 42.6 6.3 24 442-469 5-31 (162)
130 1q4g_A Prostaglandin G/H synth 88.8 0.21 7.2E-06 55.3 3.3 37 425-475 2-40 (553)
131 3vta_A Cucumisin; subtilisin-l 88.5 0.48 1.7E-05 53.2 6.1 63 99-180 280-342 (621)
132 3gha_A Disulfide bond formatio 86.7 3.1 0.0001 39.3 9.8 93 293-397 85-179 (202)
133 3zyj_B Netrin-G1; cell adhesio 85.7 0.65 2.2E-05 49.3 4.7 86 444-558 304-393 (426)
134 3nt1_A Prostaglandin-endoperox 85.5 0.37 1.3E-05 53.5 2.9 37 425-475 1-39 (587)
135 3bci_A Disulfide bond protein 85.5 11 0.00037 34.5 12.9 149 195-396 9-164 (186)
136 4aqs_A Laminin subunit beta-1; 85.2 0.44 1.5E-05 52.4 3.4 48 506-557 417-469 (525)
137 1b9w_A Protein (merozoite surf 85.1 1.1 3.6E-05 36.8 4.6 58 499-557 16-79 (95)
138 1g1t_A E-selectin; EGF, adhesi 84.9 0.36 1.2E-05 43.6 2.1 35 526-566 120-154 (157)
139 3cfw_A L-selectin; EGF, cell a 84.3 0.46 1.6E-05 43.3 2.6 30 499-530 131-161 (164)
140 1nt0_A MAsp2, mannose-binding 82.8 0.75 2.6E-05 46.2 3.7 40 524-566 119-162 (286)
141 3dem_A Complement factor MAsp- 82.7 0.9 3.1E-05 45.3 4.2 41 524-567 120-164 (278)
142 3ca7_A Protein spitz; argos, E 81.9 0.6 2.1E-05 34.1 1.9 27 442-475 18-48 (52)
143 3asi_A Neurexin-1-alpha; beta- 81.8 1.1 3.6E-05 47.5 4.5 36 525-566 185-221 (410)
144 3cfw_A L-selectin; EGF, cell a 81.6 0.48 1.6E-05 43.2 1.5 32 442-482 129-160 (164)
145 1b9w_A Protein (merozoite surf 81.3 3.6 0.00012 33.6 6.3 63 442-516 14-79 (95)
146 2fd6_A Urokinase-type plasmino 81.2 1.4 4.8E-05 38.3 4.3 55 492-567 3-63 (122)
147 2rnl_A Amphiregulin; AR, color 78.9 2.5 8.5E-05 30.6 4.3 38 523-566 7-48 (50)
148 2fd6_A Urokinase-type plasmino 76.3 3.3 0.00011 35.9 5.2 27 442-475 5-34 (122)
149 1xdt_R Hbegf, heparin-binding 75.0 1.5 5E-05 35.1 2.2 37 524-566 36-76 (79)
150 2i9a_A Urokinase-type plasmino 74.7 2.6 8.9E-05 37.8 4.2 28 491-523 14-45 (145)
151 3ltf_D Protein spitz; receptor 74.6 1.2 4.1E-05 33.4 1.6 30 435-476 16-49 (58)
152 1g1t_A E-selectin; EGF, adhesi 74.3 1.1 3.7E-05 40.3 1.6 37 425-475 119-155 (157)
153 2p28_B Integrin beta-2; hybrid 70.3 3.1 0.00011 40.0 3.8 48 499-556 102-162 (217)
154 1iox_A Betacellulin; EGF-like 68.3 2.7 9.1E-05 30.4 2.2 30 532-567 14-45 (50)
155 3e50_C Protransforming growth 68.0 3.8 0.00013 29.6 3.0 30 532-567 14-45 (50)
156 3gyk_A 27KDA outer membrane pr 65.9 72 0.0025 28.3 12.6 78 309-397 83-160 (175)
157 3qcw_A Neurexin-1-alpha; synap 63.7 4.3 0.00015 49.4 4.1 40 521-566 1012-1053(1245)
158 3fby_A COMP, cartilage oligome 63.0 4.9 0.00017 43.6 3.9 41 524-567 17-60 (551)
159 3e50_C Protransforming growth 61.0 4 0.00014 29.5 1.9 24 500-525 20-46 (50)
160 3fby_A COMP, cartilage oligome 60.9 6.8 0.00023 42.5 4.5 38 479-523 19-59 (551)
161 3asi_A Neurexin-1-alpha; beta- 59.5 5.9 0.0002 41.7 3.8 37 425-475 185-222 (410)
162 3qcw_A Neurexin-1-alpha; synap 59.2 5.8 0.0002 48.3 4.1 40 521-566 613-655 (1245)
163 2dtg_E Insulin receptor; IR ec 57.4 8 0.00028 45.2 4.8 66 501-566 228-302 (897)
164 3zyj_B Netrin-G1; cell adhesio 57.2 5.3 0.00018 42.3 2.9 36 499-546 377-412 (426)
165 1nt0_A MAsp2, mannose-binding 56.7 6.5 0.00022 39.2 3.4 29 444-475 135-163 (286)
166 2ygo_A WIF-1, WNT inhibitory f 56.1 5.8 0.0002 37.0 2.6 30 487-523 150-179 (188)
167 3dem_A Complement factor MAsp- 54.9 7.2 0.00025 38.5 3.4 29 444-475 136-164 (278)
168 3fl7_A Ephrin receptor; ATP-bi 52.4 5.4 0.00019 43.8 2.1 47 508-557 264-319 (536)
169 1xdt_R Hbegf, heparin-binding 48.1 7.6 0.00026 30.9 1.7 26 442-475 50-77 (79)
170 2ygo_A WIF-1, WNT inhibitory f 40.8 15 0.0005 34.3 2.7 31 527-567 150-180 (188)
171 4aqt_A Laminin subunit gamma-1 39.6 10 0.00035 39.5 1.7 21 548-568 346-367 (375)
172 2i9a_A Urokinase-type plasmino 39.1 35 0.0012 30.3 4.9 27 442-475 17-46 (145)
173 4b2v_A S64; toxin, ICK; NMR {S 37.1 15 0.0005 22.7 1.4 15 261-276 1-15 (32)
174 1iox_A Betacellulin; EGF-like 37.1 20 0.00068 25.7 2.4 27 442-476 18-46 (50)
175 4aqb_A Mannan-binding lectin s 36.3 25 0.00086 36.0 4.1 41 524-567 120-164 (361)
176 2rnl_A Amphiregulin; AR, color 33.2 26 0.00088 25.2 2.4 22 444-469 23-46 (50)
177 1hx2_A BSTI; beta-sheet disulf 32.9 54 0.0019 24.1 4.4 23 506-528 35-60 (60)
178 4f87_A Plycb; lysin, bacteriop 30.3 23 0.00078 25.8 1.7 20 158-177 52-71 (72)
179 3gmf_A Protein-disulfide isome 29.9 8 0.00027 36.6 -1.0 57 335-398 128-185 (205)
180 3f4s_A Alpha-DSBA1, putative u 29.7 3.5E+02 0.012 25.3 11.9 83 309-397 103-190 (226)
181 4dvc_A Thiol:disulfide interch 25.1 33 0.0011 30.7 2.4 51 333-390 109-159 (184)
182 2x5h_A ORF 131; viral protein; 23.9 90 0.0031 24.7 4.2 52 179-243 45-97 (97)
183 2hr7_A Insulin receptor; hormo 22.3 22 0.00074 38.4 0.6 66 501-566 228-302 (486)
No 1
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=99.89 E-value=3.9e-22 Score=190.69 Aligned_cols=144 Identities=21% Similarity=0.323 Sum_probs=111.9
Q ss_pred EEEeeceEEEEc--CCC---cceeecccccCcCCCCCCCceEEEEEecC--CCCCCCCCCCCCC-CC--CCCCCCCEEEE
Q 006787 36 FVVEKSSIRVLH--PQS---LRSKHDSAIGNFGIPDYGGFMVGSVIYPD--KGASGCQPFEGDK-PF--KSKFPRPTVLL 105 (631)
Q Consensus 36 ~~v~~~~~~v~~--p~~---~~~~~~~~~a~FG~~~~~~~i~g~lv~~~--~~~~gC~~~~~~~-~~--~~~~~~~~i~L 105 (631)
..+.++.+.++. |.. .........++||..++.+.+.|.|+++. ++.+||+++++.. +. .++...++|||
T Consensus 30 ~~~~~A~vn~sy~d~~~~~n~t~~~~~e~a~FG~~~p~~~v~G~lv~~~~~~~~~GC~~~~~~~~~~~~~~~~~~gkIaL 109 (194)
T 3icu_A 30 EAVWTAYLNVSWRVPHTGVNRTVWELSEEGVYGQDSPLEPVAGVLVPPDGPGALNACNPHTNFTVPTVWGSTVQVSWLAL 109 (194)
T ss_dssp SCEEEEEEEEEEECCSSCTTCEEEEEEEEEEECTTSCCSCEEEEEECBSSTTCTTCCSTTCCBCCCBCTTSSCBCCEEEE
T ss_pred eeEEEEEEEEEEECCCCCccceeeecccccccCCCCCCCCcEEEEEecCCCCCcCCCCCCccccCCcccccccCCCeEEE
Confidence 344555555544 332 22235678899999999999999999876 4789999987221 11 11234589999
Q ss_pred EecCc-cCHHHHHHHHHHcCCcEEEEEeCCC--CCccccCCCCCCCCcCCcccccCccEEEEeHHHHHHHHHHHHcCCEE
Q 006787 106 LDRGE-CYFALKVWHGQQAGAAAVLVADSVD--EPLITMDSPEESTDANGYVEKIGIPSALIDRAFGLSLKEALKKGEEV 182 (631)
Q Consensus 106 V~RG~-CsF~~Kv~nAq~aGA~avII~~~~~--~~~~~m~~~~~~~~~~~~~~~i~IP~~~I~~~~G~~l~~~l~~g~~V 182 (631)
|+||+ |+|.+|++|||++||+||||||+.+ +.+++|..++ ..+||++||++++|+.|+++|++|.+|
T Consensus 110 V~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~----------~~~IPsv~Is~~~G~~L~~~L~~G~~V 179 (194)
T 3icu_A 110 IQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPG----------AVDIVAIMIGNLKGTKILQSIQRGIQV 179 (194)
T ss_dssp EESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTT----------CCSSEEEEECHHHHHHHHHHHHTTCCE
T ss_pred EECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCC----------CCceeEEEECHHHHHHHHHHHHCCCeE
Confidence 99999 9999999999999999999999852 3557775332 247999999999999999999999999
Q ss_pred EEEEEec
Q 006787 183 VIKLDWT 189 (631)
Q Consensus 183 ~v~l~~~ 189 (631)
+++|.+.
T Consensus 180 tvti~vg 186 (194)
T 3icu_A 180 TMVIEVG 186 (194)
T ss_dssp EEEEEEE
T ss_pred EEEEECC
Confidence 9999883
No 2
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.64 E-value=8.6e-17 Score=155.05 Aligned_cols=148 Identities=24% Similarity=0.579 Sum_probs=114.2
Q ss_pred eccccCCcc-cccccccccc-cCccccCCCCcccCCcccccccccc--ccCCCcccCCCCCceeeCC-----CceeeecC
Q 006787 388 NDVQYRGKL-ERTAVLRAIC-AGFKEATEPQICLTGDLETNECLER--NGGCWQDTQANITACKDTF-----RGRLCECP 458 (631)
Q Consensus 388 N~~~y~G~l-~~~~v~~~~C-~Gf~~~~~g~~C~~~~~d~deC~~~--~~~C~~~~~~~~~~C~~~~-----g~~~C~C~ 458 (631)
.+++..|.. ...+.+.+.| +||.+. ++..|. ++|||... +..|. +++.|+++. ++|+|.|+
T Consensus 10 ~~pC~ng~C~~~~g~~~C~C~~G~~g~-~~~~C~----~id~C~~~~~~~~C~-----~~~~C~~~~~~~~~g~y~C~C~ 79 (186)
T 1z1y_A 10 DTICXNGQLVQMSNHFXCMCNEGLVHL-SENTCE----EXNECXXETLGXACG-----EFGQCIENPDPAQVNMYXCGCI 79 (186)
T ss_dssp TCCCBTEEEEECSSCEEEEECTTEEEE-ETTEEE----ECCCCSGGGTTSEEE-----TTEEEEECSSTTSSCSEEEEEC
T ss_pred CCCCCCCEeECCCCCeEeECCCCCccC-CCCccC----CCCcccCCCCCCCCC-----CCCEeecCCCCcCCCCEECCCC
Confidence 455555522 2335678888 999874 466898 58999854 44598 779999999 89999999
Q ss_pred CCCCeeeeCCCccceeecCCCcccCCCCCCCCCCCCCCccccce----eCC-CceeeCCCCccc---CCCccccC--cCc
Q 006787 459 IVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACS----ESQ-ITGCHCPKGFRG---DGHKCEDI--NEC 528 (631)
Q Consensus 459 ~~~G~~~~gdg~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~----~~~-~~~C~C~~Gy~g---~~~~C~di--deC 528 (631)
+ ||. +++ ..|+ + ++|... +|... +.|+ ++. +|.|.|++||.| ++..|+++ |||
T Consensus 80 ~--G~~--g~~-~~C~-~--d~C~~~--~C~~~-------g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C 142 (186)
T 1z1y_A 80 E--GYT--LXE-DTCV-L--DVCQYX--NCGES-------GECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETAC 142 (186)
T ss_dssp T--TEE--EET-TEEE-E--GGGTTC--CCCTT-------EEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCC
T ss_pred C--CCc--cCC-CCCC-C--CcCcCC--CCCCC-------CEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCcc
Confidence 9 554 444 3576 4 899864 36544 7798 777 999999999998 66899976 899
Q ss_pred cCCCCC-CCCCCeeeecCCCeEEecCCCCeecCCCCce
Q 006787 529 KERSAC-QCDGCSCQNTWGGFECKCKGNLLFIKEQDAC 565 (631)
Q Consensus 529 ~~~~~C-~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C 565 (631)
.. +| . ++++|+|+.|+|+|.|++||.+.......
T Consensus 143 ~~--~C~~-~~~~C~n~~g~y~C~C~~G~~g~~~~~~~ 177 (186)
T 1z1y_A 143 QL--XCNT-DNEVCXNVEGVYXCQCMEGFTFDXEXNVC 177 (186)
T ss_dssp CC--CCCT-TTEEEEEETTEEEEEECTTCEEETTTTEE
T ss_pred cc--cccc-cCcceecCCCCeeeECCCCCccCcccccC
Confidence 84 89 7 78999999999999999999887665543
No 3
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.63 E-value=4.7e-16 Score=173.93 Aligned_cols=119 Identities=27% Similarity=0.711 Sum_probs=100.4
Q ss_pred ccccccccccCCCcccCCCCCceeeCCCc-eee-ecCCCCCeeeeCCCccceeecCCCcccCCCCCCCCCCCCCCccc--
Q 006787 424 ETNECLERNGGCWQDTQANITACKDTFRG-RLC-ECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFS-- 499 (631)
Q Consensus 424 d~deC~~~~~~C~~~~~~~~~~C~~~~g~-~~C-~C~~~~G~~~~gdg~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~-- 499 (631)
++|||..++ |. +++.|+++.++ |+| .|++ +|.|++ +.|+++ +||...++.|.+. +
T Consensus 2 DIDeC~~nP--C~-----~gg~C~n~~~Gsy~C~~C~~----GytGdg-~~CeDi--DEC~~~p~~C~~g-------g~~ 60 (634)
T 1yo8_A 2 DPDGCLSNP--CF-----PGAQCSSFPDGSWSCGFCPV----GFLGNG-THCEDL--DECALVPDICFST-------SKV 60 (634)
T ss_dssp --CGGGGCC--SC-----TTCCEEECTTSCEEECCCCT----TBCSCS-SSCCBC--CTTTTSCCCSCCC-------SSS
T ss_pred cccccCCCC--CC-----CCCEEecCCCCCeECCcCCC----ccCCCC-CCcccc--ccccCCCCcccCC-------ccc
Confidence 689998665 98 77999999865 999 9999 556888 789987 9999887778765 5
Q ss_pred -cceeCC-Cceee-CCCCcccCC-------------CccccCcCccCC-CCCCCCCCeeeecC----CCeEEecCCCCee
Q 006787 500 -ACSESQ-ITGCH-CPKGFRGDG-------------HKCEDINECKER-SACQCDGCSCQNTW----GGFECKCKGNLLF 558 (631)
Q Consensus 500 -~C~~~~-~~~C~-C~~Gy~g~~-------------~~C~dideC~~~-~~C~~~~~~C~nt~----Gsy~C~C~~G~~~ 558 (631)
+|+++. +|+|. |++||.|+. ..|++|+||... ++|+ ++++|+|+. |+|+|.|++||.
T Consensus 61 ~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~-~~~~Cvnt~~~~~GsY~C~C~~Gy~- 138 (634)
T 1yo8_A 61 PRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCH-KHAECIYLGHFSDPMYKCECQTGYA- 138 (634)
T ss_dssp CCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCC-TTEEEEECCTTCSSSEEEEECTTEE-
T ss_pred cceeeccCceecccCCCCcccCccccccccccccCCCcccccccccCCCcccc-cCccccccccccccceeeeccCCcc-
Confidence 799999 99999 999999775 349999999974 6999 889999999 999999999996
Q ss_pred cCCCCcee
Q 006787 559 IKEQDACI 566 (631)
Q Consensus 559 ~~d~~~C~ 566 (631)
+++..|.
T Consensus 139 -GdG~~Ce 145 (634)
T 1yo8_A 139 -GDGLICG 145 (634)
T ss_dssp -ESSSSEE
T ss_pred -ccCcccc
Confidence 4566776
No 4
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.3e-16 Score=147.79 Aligned_cols=124 Identities=30% Similarity=0.644 Sum_probs=91.3
Q ss_pred cccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCC---------cccCCCCCCCCCCC
Q 006787 423 LETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPA---------RCSINNGGCWSDTK 493 (631)
Q Consensus 423 ~d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~---------~C~~~~~~C~~~~~ 493 (631)
.|+|||..++ |. + ++|+++.++|+|.|++ ||....++ +.|++.... .|......|...
T Consensus 2 ~dideC~~~p--C~-----n-g~C~n~~g~y~C~C~~--G~~g~~~~-~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~-- 68 (147)
T 2w86_A 2 ADIDECESSP--CI-----N-GVCKNSPGSFICECSS--ESTLDPTK-TICIETIKGTCWQTVIDGRCEININGATLK-- 68 (147)
T ss_dssp CCCCGGGGCC--SB-----T-SEEEEETTEEEEECCT--TEEECTTS-SBEEECCCEEEEEEEETTEEEEEEEEEECH--
T ss_pred CcCccCcCCC--CC-----C-CEeECCCCCEEeECCC--CcccCCCC-CeecCCCCCcccCCCCCCccccCCCccccC--
Confidence 3789998765 97 5 6999999999999999 88777666 678764111 222111111110
Q ss_pred CCCccccceeCC-----------CceeeCCCCccc-CCCccccCcCccCC-CCCCCCCCeeeecCCCeEEecCCCCeecC
Q 006787 494 NGLTFSACSESQ-----------ITGCHCPKGFRG-DGHKCEDINECKER-SACQCDGCSCQNTWGGFECKCKGNLLFIK 560 (631)
Q Consensus 494 ~g~~~~~C~~~~-----------~~~C~C~~Gy~g-~~~~C~dideC~~~-~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~ 560 (631)
..|.+.. .|.|.|++||++ ++..|+|||||..+ ++|. + ++|+|+.|+|+|.|++||.+..
T Consensus 69 -----~~C~~~~g~~~g~~C~~c~~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~-~-g~C~n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 69 -----SQCCSSLGAAWGSPCTLCQVDPICGKGYSRIKGTQCEDIDECEVFPGVCK-N-GLCVNTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp -----HHHHTTTCSEETTTTEECCCCTTTCTTEEEEETTEEEECCHHHHSTTCSS-S-SEEEEETTEEEEECCTTCCBCT
T ss_pred -----CccccCcCcccCCCcccCCCcccCCCccccCCCCccCccccccCCCCCCC-C-CEEECCCCCEEeeCCCCCccCC
Confidence 1222222 378899999974 45699999999864 5698 4 5999999999999999999999
Q ss_pred CCCcee
Q 006787 561 EQDACI 566 (631)
Q Consensus 561 d~~~C~ 566 (631)
++++|+
T Consensus 142 ~~~~C~ 147 (147)
T 2w86_A 142 TGRICL 147 (147)
T ss_dssp TSSCBC
T ss_pred CCCeeC
Confidence 999884
No 5
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.60 E-value=3e-15 Score=136.61 Aligned_cols=112 Identities=27% Similarity=0.708 Sum_probs=94.0
Q ss_pred ccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCcccee-ecCCCcccCCCCCCCCCCCCCCccccce
Q 006787 424 ETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQ-AYGPARCSINNGGCWSDTKNGLTFSACS 502 (631)
Q Consensus 424 d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~-~i~~~~C~~~~~~C~~~~~~g~~~~~C~ 502 (631)
|+|||...+..|. +++.|+++.++|+|.|++ | |.|+. |+ ++ ++|... +|... ++|+
T Consensus 4 dideC~~~~~~C~-----~~g~C~~~~g~~~C~C~~--G--y~G~~---C~~~~--~~C~~~--~C~~~-------~~C~ 60 (135)
T 2vj3_A 4 DVDECSLGANPCE-----HAGKCINTLGSFECQCLQ--G--YTGPR---CEIDV--NECVSN--PCQND-------ATCL 60 (135)
T ss_dssp CCCTTTSSSCSSS-----TTCEEEECSSSEEEECCT--T--EESTT---SCEEC--CTTTTC--CCCSS-------CEEE
T ss_pred ccccccCCCCCCC-----CCCEeECCCCCEEEECCC--C--CcCCc---ccccC--ccCCCC--CCCCC-------CEEe
Confidence 6899986666698 779999999999999999 5 45554 85 55 899753 45544 7899
Q ss_pred eCC-CceeeCCCCcccCCCccc-cCcCccCCCCCCCCCCeeeecCCCeEEecCCCCeecCCCCcee
Q 006787 503 ESQ-ITGCHCPKGFRGDGHKCE-DINECKERSACQCDGCSCQNTWGGFECKCKGNLLFIKEQDACI 566 (631)
Q Consensus 503 ~~~-~~~C~C~~Gy~g~~~~C~-dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C~ 566 (631)
+.. +|.|.|++||.|. .|+ ++|+|... +|. ++++|+++.|+|+|.|++||. +..|.
T Consensus 61 ~~~g~~~C~C~~G~~G~--~C~~~~~~C~~~-~C~-~~g~C~~~~g~~~C~C~~G~~----G~~C~ 118 (135)
T 2vj3_A 61 DQIGEFQCICMPGYEGV--HCEVNTDECASS-PCL-HNGRCLDKINEFQCECPTGFT----GHLCQ 118 (135)
T ss_dssp ECSSCEEEECCTTEESS--SSCEECCTTTTC-CST-TTCEEEECSSCEEEECCTTEE----SSSSC
T ss_pred CCCCCceeeCCCCCcCC--cceecCCcccCC-CcC-CCCEeECCCCCeEEECCCCCc----CCccC
Confidence 998 9999999999986 887 89999886 999 889999999999999999996 45564
No 6
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.60 E-value=6.8e-16 Score=137.45 Aligned_cols=113 Identities=29% Similarity=0.693 Sum_probs=86.4
Q ss_pred ccccccccccCCCcccCCCCCceeeC-CCceeeecCCCCCeeeeCCCccceeecCCCcccCCCCCCCCCCCCCCccccce
Q 006787 424 ETNECLERNGGCWQDTQANITACKDT-FRGRLCECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACS 502 (631)
Q Consensus 424 d~deC~~~~~~C~~~~~~~~~~C~~~-~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~ 502 (631)
|+|||..++ |. +.|+++ .++|+|.|++ ||.........|++ +|. ++.|. +.|+
T Consensus 3 dideC~~~p--C~-------~~C~~~~~g~y~C~C~~--Gy~g~~~~~~~C~~----~C~--~~~C~---------~~C~ 56 (118)
T 1dx5_I 3 PVDPCFRAN--CE-------YQCQPLDQTSYLCVCAE--GFAPIPHEPHRCQM----FCN--QTACP---------ADCD 56 (118)
T ss_dssp CCCGGGGCC--CS-------SEEEECSSSCEEEECCT--TEEEETTEEEEEEE----CCC--SSEEE---------CEEC
T ss_pred ccccCCCCC--CC-------CCCCCCCCCCEEeECCC--CccccCCCCCcccc----ccC--CCCCC---------Cccc
Confidence 689997555 98 599999 9999999999 77654322123443 132 23343 3487
Q ss_pred eCCCceeeCCCCcccC-CCccccCcCccCCCCCCCCCCeeeecCCCeEEecCCCCeecCC-CCce
Q 006787 503 ESQITGCHCPKGFRGD-GHKCEDINECKERSACQCDGCSCQNTWGGFECKCKGNLLFIKE-QDAC 565 (631)
Q Consensus 503 ~~~~~~C~C~~Gy~g~-~~~C~dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~d-~~~C 565 (631)
+..+|.|.|++||.++ +..|+|||||...++|. ++|+|+.|+|+|.|++||++..+ +++|
T Consensus 57 ~~~~y~C~C~~Gy~~~~g~~C~dideC~~~~~C~---~~C~n~~g~y~C~C~~G~~g~~~~g~~C 118 (118)
T 1dx5_I 57 PNTQASCECPEGYILDDGFICTDIDECENGGFCS---GVCHNLPGTFECICGPDSALAGQIGTDC 118 (118)
T ss_dssp TTSTTCEECCTTEEEETTTEEEECCHHHHCSSCS---SEEEECSSSEEEEECSSSSCEEEESCCC
T ss_pred CCCCeEeECCCCccCCCCCccccccccCCCCCCc---CeEEeCCCCEEEECCCCCccCCCCCCCC
Confidence 7449999999999955 57999999998744896 99999999999999999988776 6655
No 7
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.59 E-value=1.5e-15 Score=139.93 Aligned_cols=111 Identities=21% Similarity=0.521 Sum_probs=90.8
Q ss_pred CCCceeeCCCceeeecCCCCCeeee-----CCCccceeecCCCcccCCC-CCCCCCCCCCCccccceeCC-CceeeCCCC
Q 006787 442 NITACKDTFRGRLCECPIVKGVQYR-----GDGYISCQAYGPARCSINN-GGCWSDTKNGLTFSACSESQ-ITGCHCPKG 514 (631)
Q Consensus 442 ~~~~C~~~~g~~~C~C~~~~G~~~~-----gdg~~~C~~i~~~~C~~~~-~~C~~~~~~g~~~~~C~~~~-~~~C~C~~G 514 (631)
+++.|+++ |+|.|++ ||... .++ ..|+++ ++|.... ..|... +.|+++. +|.|.|++|
T Consensus 11 ~~~~C~~~---~~C~C~~--G~~g~~~~~~~~~-~~C~di--deC~~~~~~~C~~~-------~~C~n~~g~y~C~C~~G 75 (143)
T 2bou_A 11 QDSSCVNA---TACRCNP--GFSSFSEIITTPM-ETCDDI--NECATLSKVSCGKF-------SDCWNTEGSYDCVCSPG 75 (143)
T ss_dssp TTEEESSS---SCEEECT--TEECSSSSBCSTT-CCCEEC--CGGGC----CCCTT-------EEEEECSSCEEEEECTT
T ss_pred CCCEEcCC---CEEeCCC--CCcCccccccCCC-CcCCcc--ccccCCCCCCCCCC-------CEEEcCCCCeEeECCCC
Confidence 67899875 8999999 65432 234 579987 9998754 367654 7899999 999999999
Q ss_pred cccC----------CCccccCcCccCC-CCCCCCCCeeeecCCCeEEecCCCCeecCCCCceeec
Q 006787 515 FRGD----------GHKCEDINECKER-SACQCDGCSCQNTWGGFECKCKGNLLFIKEQDACIER 568 (631)
Q Consensus 515 y~g~----------~~~C~dideC~~~-~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C~~~ 568 (631)
|.|. +..|+|||||... ++|. ++++|+|+.|+|+|.|++||++..++..|.+.
T Consensus 76 y~g~~~~~~~~~~~~~~C~dideC~~~~~~C~-~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~~ 139 (143)
T 2bou_A 76 YEPVSGAKTFKNESENTCQDVDECSSGQHQCD-SSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKD 139 (143)
T ss_dssp EEETTCCSCBSSGGGCCEEECCHHHHTCCCCC-TTSEEEECSSCEEEECCSSSCBCTTCCSSBTT
T ss_pred cccCcCccccccCCCCCcCCccCccCcCCCCC-CCCEEECCCCCEEeeCCCCcccCCCCccCccC
Confidence 9986 3589999999863 6899 88999999999999999999999888888764
No 8
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.59 E-value=6.3e-16 Score=145.57 Aligned_cols=124 Identities=29% Similarity=0.663 Sum_probs=91.1
Q ss_pred ccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCc--ccCCCCCCCCCCCCCCccccc
Q 006787 424 ETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPAR--CSINNGGCWSDTKNGLTFSAC 501 (631)
Q Consensus 424 d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~--C~~~~~~C~~~~~~g~~~~~C 501 (631)
|+|||.. +..|. + +.|+|+.++|+|.|++ ||.+..++ +.|+++ ++ |......|... ++ +.|
T Consensus 2 dideC~~-~~~C~-----~-~~C~n~~gsy~C~C~~--Gy~~~~~g-~~C~d~--~~~~C~~~~~~c~~~--~~---~~C 64 (162)
T 1uzk_A 2 DVNECLD-PTTCI-----S-GNCVNTPGSYICDCPP--DFELNPTR-VGCVDT--RSGNCYLDIRPRGDN--GD---TAC 64 (162)
T ss_dssp CCCGGGS-TTSSB-----T-SEEEEETTEEEEECCT--TCEECTTS-SBEECC--CCEEEEEEC---------------C
T ss_pred ccccCCC-CCCCC-----C-CEeECCCCCEEEeCCC--CCeECCCC-CcccCC--CCCcccCCCcccCCC--CC---Ccc
Confidence 6899985 23485 2 7999999999999999 99888888 889987 65 87544333110 00 223
Q ss_pred eeC-----------------------------C-CceeeCCC--CcccCC--CccccCcCccCC-CCCCCCCCeeeecCC
Q 006787 502 SES-----------------------------Q-ITGCHCPK--GFRGDG--HKCEDINECKER-SACQCDGCSCQNTWG 546 (631)
Q Consensus 502 ~~~-----------------------------~-~~~C~C~~--Gy~g~~--~~C~dideC~~~-~~C~~~~~~C~nt~G 546 (631)
+++ . +|.|.|++ ||++++ ..|+|||||... ++|. + ++|+|+.|
T Consensus 65 ~~~~~~~~~~~~C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~-~-g~C~n~~g 142 (162)
T 1uzk_A 65 SNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQ-G-GKCINTFG 142 (162)
T ss_dssp EEEEEEEECHHHHHTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGB-T-SEEEECSS
T ss_pred cCCcCCcccCceeeCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcC-C-CEeEcCCC
Confidence 332 2 56666766 777654 578999999874 5798 4 69999999
Q ss_pred CeEEecCCCCeecCCCCcee
Q 006787 547 GFECKCKGNLLFIKEQDACI 566 (631)
Q Consensus 547 sy~C~C~~G~~~~~d~~~C~ 566 (631)
+|+|.|++||++..++++|+
T Consensus 143 sy~C~C~~Gy~g~~d~~~C~ 162 (162)
T 1uzk_A 143 SFQCRCPTGYYLNEDTRVCD 162 (162)
T ss_dssp CEEEECCTTCCBCTTTCBBC
T ss_pred CEEeeCCCCccCCCCCCccC
Confidence 99999999999999999884
No 9
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.46 E-value=7.8e-14 Score=128.25 Aligned_cols=109 Identities=29% Similarity=0.773 Sum_probs=78.5
Q ss_pred ccccccccCCCcccCCCCCceeeCC--CceeeecCCCCCeeeeCCCccceeecCCCcccCCC------CCCCC-CCCCCC
Q 006787 426 NECLERNGGCWQDTQANITACKDTF--RGRLCECPIVKGVQYRGDGYISCQAYGPARCSINN------GGCWS-DTKNGL 496 (631)
Q Consensus 426 deC~~~~~~C~~~~~~~~~~C~~~~--g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~~~------~~C~~-~~~~g~ 496 (631)
|+|..++ |. ++++|+++. ++|+|.|++ || .|.. |+.+ .+|.... ..|.. .|.++
T Consensus 1 d~C~~~p--C~-----~~g~C~~~~~~g~~~C~C~~--G~--~G~~---C~~~--~~~~~~~~~c~~~~~C~~~~C~~~- 63 (143)
T 4d90_A 1 DICDPNP--CE-----NGGICLPGLADGSFSCECPD--GF--TDPN---CSSV--VEVASDEEEPTSAGPCTPNPCHNG- 63 (143)
T ss_dssp --CCSCC--CG-----GGCEEEC-----CCEEECCT--TC--CTTT---TCSC--CCCTTTTTSCCCCCTTSSCCCCTT-
T ss_pred CcCCCCc--CC-----CCCEeeCCCCCCCEEeECCC--CC--CCCC---CccC--ccccccccccccCCcCCCCCCCCC-
Confidence 4777666 88 779999876 689999999 55 5544 7653 2222111 11211 13343
Q ss_pred ccccce-------eCC-CceeeCCCCcccCCCccc-cCcCccCCCCCCCCCCeeeecCCCeEEecCCCCe
Q 006787 497 TFSACS-------ESQ-ITGCHCPKGFRGDGHKCE-DINECKERSACQCDGCSCQNTWGGFECKCKGNLL 557 (631)
Q Consensus 497 ~~~~C~-------~~~-~~~C~C~~Gy~g~~~~C~-dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~ 557 (631)
+.|+ ++. +|.|.|++||.|. .|+ +||||..+ +|. ++++|+|+.|+|+|.|++||.
T Consensus 64 --g~C~~~~~~~~~~~~~~~C~C~~G~~G~--~C~~~i~~C~~~-~C~-~~~~C~~~~g~~~C~C~~G~~ 127 (143)
T 4d90_A 64 --GTCEISEAYRGDTFIGYVCKCPRGFNGI--HCQHNINECEVE-PCK-NGGICTDLVANYSCECPGEFM 127 (143)
T ss_dssp --CEEEECCCEETTEECCEEEECCTTEEST--TSCEECCTTTTC-CSC-TTCEEEEETTEEEEECCTTCB
T ss_pred --CEecCCCccccCCCCCeEeECcCCCcCC--CcccCCCcCCCC-CCC-CCCEeECCCCCeEeECCCCCc
Confidence 7798 565 8999999999876 898 99999976 899 889999999999999999995
No 10
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.44 E-value=3e-13 Score=151.33 Aligned_cols=112 Identities=23% Similarity=0.567 Sum_probs=91.7
Q ss_pred cccc-cc-cCccccCCCCcccCCccccccccccccCCCcccCCCCC---ceeeCCCceeee-cCCCCCeeeeC-------
Q 006787 401 VLRA-IC-AGFKEATEPQICLTGDLETNECLERNGGCWQDTQANIT---ACKDTFRGRLCE-CPIVKGVQYRG------- 467 (631)
Q Consensus 401 v~~~-~C-~Gf~~~~~g~~C~~~~~d~deC~~~~~~C~~~~~~~~~---~C~~~~g~~~C~-C~~~~G~~~~g------- 467 (631)
.|+| .| +||.+ ++..|+ +++||..+++.|. +++ +|+++.++|+|. |++ ||...+
T Consensus 24 sy~C~~C~~GytG--dg~~Ce----DiDEC~~~p~~C~-----~gg~~~~CvNt~gsY~C~~C~~--Gy~G~~c~g~g~~ 90 (634)
T 1yo8_A 24 SWSCGFCPVGFLG--NGTHCE----DLDECALVPDICF-----STSKVPRCVNTQPGFHCLPCPP--RYRGNQPVGVGLE 90 (634)
T ss_dssp CEEECCCCTTBCS--CSSSCC----BCCTTTTSCCCSC-----CCSSSCCEEECSSSEEECCCCT--TEEECCCEESSSH
T ss_pred CeECCcCCCccCC--CCCCcc----ccccccCCCCccc-----CCccccceeeccCceecccCCC--CcccCcccccccc
Confidence 4888 89 99975 568898 6899998888898 666 899999999998 999 664322
Q ss_pred ----CCccceeecCCCcccCCCCCCCCCCCCCCccccceeCC-----CceeeCCCCcccCCCccc---cCcCccCC-CCC
Q 006787 468 ----DGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSESQ-----ITGCHCPKGFRGDGHKCE---DINECKER-SAC 534 (631)
Q Consensus 468 ----dg~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~~~-----~~~C~C~~Gy~g~~~~C~---dideC~~~-~~C 534 (631)
++ +.|+++ ++|...++.|... ++|+++. +|+|.|++||.|++..|+ |||||... ++|
T Consensus 91 ~~~~dg-~~C~di--deC~~~~~pC~~~-------~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~d~DiDeC~~~~~~C 160 (634)
T 1yo8_A 91 AAKTEK-QVCEPE--NPCKDKTHNCHKH-------AECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPNLNLVC 160 (634)
T ss_dssp HHHSCC-CCEEEC--CTTTTTCCCCCTT-------EEEEECCTTCSSSEEEEECTTEEESSSSEEECTTSSSSCSSCCTT
T ss_pred ccccCC-Cccccc--ccccCCCcccccC-------ccccccccccccceeeeccCCccccCcccccccCcccccCCCCcc
Confidence 23 459987 9999877788765 7899874 899999999999998997 89999764 566
Q ss_pred C
Q 006787 535 Q 535 (631)
Q Consensus 535 ~ 535 (631)
.
T Consensus 161 ~ 161 (634)
T 1yo8_A 161 A 161 (634)
T ss_dssp T
T ss_pred c
Confidence 5
No 11
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.41 E-value=1.1e-13 Score=133.29 Aligned_cols=109 Identities=17% Similarity=0.441 Sum_probs=90.6
Q ss_pred CceeeCCCceeeecCCCCCeeeeCCCccceeecCCCcccCC--CCCCCCCCCCCCccccceeCC------CceeeCCCCc
Q 006787 444 TACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARCSIN--NGGCWSDTKNGLTFSACSESQ------ITGCHCPKGF 515 (631)
Q Consensus 444 ~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~~--~~~C~~~~~~g~~~~~C~~~~------~~~C~C~~Gy 515 (631)
++|+++.++|+|.|++ ||... ++ ..|+++ ++|... ..+|.+. ++|+++. +|.|.|++||
T Consensus 16 g~C~~~~g~~~C~C~~--G~~g~-~~-~~C~~i--d~C~~~~~~~~C~~~-------~~C~~~~~~~~~g~y~C~C~~G~ 82 (186)
T 1z1y_A 16 GQLVQMSNHFXCMCNE--GLVHL-SE-NTCEEX--NECXXETLGXACGEF-------GQCIENPDPAQVNMYXCGCIEGY 82 (186)
T ss_dssp EEEEECSSCEEEEECT--TEEEE-ET-TEEEEC--CCCSGGGTTSEEETT-------EEEEECSSTTSSCSEEEEECTTE
T ss_pred CEeECCCCCeEeECCC--CCccC-CC-CccCCC--CcccCCCCCCCCCCC-------CEeecCCCCcCCCCEECCCCCCC
Confidence 4999999999999999 77544 34 579987 999854 4567654 7899875 7999999999
Q ss_pred ccCCCccccCcCccCCCCCCCCCCeee----ecCCCeEEecCCCCeecC-CCCceeec
Q 006787 516 RGDGHKCEDINECKERSACQCDGCSCQ----NTWGGFECKCKGNLLFIK-EQDACIER 568 (631)
Q Consensus 516 ~g~~~~C~dideC~~~~~C~~~~~~C~----nt~Gsy~C~C~~G~~~~~-d~~~C~~~ 568 (631)
.|+...|+ +|||..+ +|. ++++|+ |+.|+|+|.|++||.+.. ++..|...
T Consensus 83 ~g~~~~C~-~d~C~~~-~C~-~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~ 137 (186)
T 1z1y_A 83 TLXEDTCV-LDVCQYX-NCG-ESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXT 137 (186)
T ss_dssp EEETTEEE-EGGGTTC-CCC-TTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEE
T ss_pred ccCCCCCC-CCcCcCC-CCC-CCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEc
Confidence 99876777 8999986 899 889999 899999999999998754 66778753
No 12
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.41 E-value=1.1e-13 Score=115.90 Aligned_cols=79 Identities=29% Similarity=0.717 Sum_probs=67.0
Q ss_pred CCcccCCCCCCCCCCCCCCccccceeCC-CceeeCCCCcccC---CCccccCcCccCC-CCCCCCCCeeeecCCCeEEec
Q 006787 478 PARCSINNGGCWSDTKNGLTFSACSESQ-ITGCHCPKGFRGD---GHKCEDINECKER-SACQCDGCSCQNTWGGFECKC 552 (631)
Q Consensus 478 ~~~C~~~~~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g~---~~~C~dideC~~~-~~C~~~~~~C~nt~Gsy~C~C 552 (631)
+|||..++..|.+ +.|+++. +|.|.|++||.++ +..|+|||||..+ ..|. +++|+|+.|+|+|.|
T Consensus 3 ideC~~~~~~C~~--------g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~--~~~C~n~~g~y~C~C 72 (86)
T 1lmj_A 3 IDECRISPDLCGR--------GQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCR--GGVCHNTEGSYRCEC 72 (86)
T ss_dssp CCTTTTCSSTTTT--------SCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTT--TSEEEEETTEEEEES
T ss_pred cccccCCCCCCCC--------CEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCC--CCEeEcCCCCEEEEC
Confidence 3899987777853 4599999 9999999999954 6789999999876 2354 589999999999999
Q ss_pred CCCCeecCCCCcee
Q 006787 553 KGNLLFIKEQDACI 566 (631)
Q Consensus 553 ~~G~~~~~d~~~C~ 566 (631)
++||.+..++++|+
T Consensus 73 ~~G~~~~~~~~~Ci 86 (86)
T 1lmj_A 73 PPGHQLSPNISACI 86 (86)
T ss_dssp CTTSCCCSSSCCCC
T ss_pred cCCcccCCCCCccC
Confidence 99999998888874
No 13
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.40 E-value=2.5e-13 Score=112.65 Aligned_cols=80 Identities=29% Similarity=0.687 Sum_probs=67.1
Q ss_pred ceeecCCCcccCCCCCCCCCCCCCCccccceeCC-CceeeCCCCcccCCCccccCcCccCCCCCCCCCCeeeecCCCeEE
Q 006787 472 SCQAYGPARCSINNGGCWSDTKNGLTFSACSESQ-ITGCHCPKGFRGDGHKCEDINECKERSACQCDGCSCQNTWGGFEC 550 (631)
Q Consensus 472 ~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g~~~~C~dideC~~~~~C~~~~~~C~nt~Gsy~C 550 (631)
+|+++ |+|.. +..|.+ +.|+++. +|+|.|++||.+++..|+|||||...++|. + ++|+|+.|+|+|
T Consensus 1 sC~di--deC~~-~~~C~~--------g~C~n~~g~y~C~C~~Gy~~~g~~C~dideC~~~~~C~-~-~~C~n~~g~y~C 67 (82)
T 1emn_A 1 SAVDM--DECKE-PDVCKH--------GQCINTDGSYRCECPFGYILAGNECVDTDECSVGNPCG-N-GTCKNVIGGFEC 67 (82)
T ss_dssp CCCCC--CSSSS-TTSCSS--------SEECCCSSCCCEECCTTEEEETTEEEECCGGGTCCTTS-S-SCEEECSSSEEE
T ss_pred CCCcc--ccCCC-CCCcCC--------CEEEecCCCEEEECCCCeECCCCccCCcccccCCCCCC-C-CEeECCCCCEEe
Confidence 37776 99986 456643 4699999 999999999997777999999998545898 5 699999999999
Q ss_pred ecCCCCeecCCCCce
Q 006787 551 KCKGNLLFIKEQDAC 565 (631)
Q Consensus 551 ~C~~G~~~~~d~~~C 565 (631)
.|++||.+..+ .+|
T Consensus 68 ~C~~G~~g~~~-~~C 81 (82)
T 1emn_A 68 TCEEGFEPGPM-MTC 81 (82)
T ss_dssp CCSSSSCCCSS-SCC
T ss_pred ECCCCeEeCCC-Ccc
Confidence 99999988776 666
No 14
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=99.34 E-value=2.1e-13 Score=118.94 Aligned_cols=80 Identities=34% Similarity=0.822 Sum_probs=33.7
Q ss_pred ceeecCCCcccCCCCCCCCCCCCCCccccceeCC-CceeeCCCCccc-CCCccccCcCccCCCCCCCCCCeeeecCCCeE
Q 006787 472 SCQAYGPARCSINNGGCWSDTKNGLTFSACSESQ-ITGCHCPKGFRG-DGHKCEDINECKERSACQCDGCSCQNTWGGFE 549 (631)
Q Consensus 472 ~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g-~~~~C~dideC~~~~~C~~~~~~C~nt~Gsy~ 549 (631)
.| ++ ++|..+++.|.. .|+++. +|.|.|++||.| ++..|+|||||...++|. ++|+|+.|+|+
T Consensus 26 ~C-d~--neC~~~~~~C~~---------~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~~~~C~---~~C~n~~gsy~ 90 (107)
T 2w2n_E 26 AM-GT--NECLDNNGGCSY---------VCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS---QLCVNLEGGYK 90 (107)
T ss_dssp CB-SC--CGGGTGGGGCSS---------EEECCSBSCEEECCTTCEEETTTEEEC-------------------------
T ss_pred CC-cC--ccCcCCCCCCCC---------EeEeCCCCeEEECCCCccccCCCccccccccCCCCCcC---CeeecCCCCEE
Confidence 37 44 999887777764 499999 999999999997 457899999998645898 89999999999
Q ss_pred EecCCCCeecCCCCcee
Q 006787 550 CKCKGNLLFIKEQDACI 566 (631)
Q Consensus 550 C~C~~G~~~~~d~~~C~ 566 (631)
|.|++||.+..++++|+
T Consensus 91 C~C~~Gy~~~~d~~~C~ 107 (107)
T 2w2n_E 91 CQCEEGFQLDPHTKACK 107 (107)
T ss_dssp -----------------
T ss_pred EECCCCceECCCCCccC
Confidence 99999999988888874
No 15
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.25 E-value=2.5e-12 Score=107.89 Aligned_cols=79 Identities=33% Similarity=0.799 Sum_probs=67.2
Q ss_pred CCcccCCCCCCCCCCCCCCccccceeCC-CceeeCCCCcccC--CCccccCcCccCCCCCCCCCCeeeecCCCeEEec--
Q 006787 478 PARCSINNGGCWSDTKNGLTFSACSESQ-ITGCHCPKGFRGD--GHKCEDINECKERSACQCDGCSCQNTWGGFECKC-- 552 (631)
Q Consensus 478 ~~~C~~~~~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g~--~~~C~dideC~~~~~C~~~~~~C~nt~Gsy~C~C-- 552 (631)
+|+|..++..| .. +.|+++. +|.|.|++||+++ +..|+|||||..+ +|. ++|+|++|+|+|.|
T Consensus 3 ideC~~~~~~C-~~-------~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~-~C~---~~C~n~~g~y~C~C~g 70 (87)
T 1z6c_A 3 VDECSLKPSIC-GT-------AVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSEN-MCA---QLCVNYPGGYTCYCDG 70 (87)
T ss_dssp SCSSSSSSSSB-TT-------SSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHS-CCS---SEECCCSSSCCEECCS
T ss_pred cccccCCCCCC-CC-------CEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCC-CCC---CEEEccCCCEEEECCC
Confidence 38998877667 33 6799999 9999999999954 5789999999875 898 89999999999999
Q ss_pred CCCCeecCCCCceeec
Q 006787 553 KGNLLFIKEQDACIER 568 (631)
Q Consensus 553 ~~G~~~~~d~~~C~~~ 568 (631)
..||.+..++..|.+.
T Consensus 71 ~~G~~~~~~~~~C~di 86 (87)
T 1z6c_A 71 KKGFKLAQDQKSCEVV 86 (87)
T ss_dssp SSCCBCCTTSSSCBCC
T ss_pred CcCCcccCCCCcceEC
Confidence 5889888888888753
No 16
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.22 E-value=1e-11 Score=114.07 Aligned_cols=107 Identities=23% Similarity=0.492 Sum_probs=83.0
Q ss_pred ccccc-cCcccc-----CCCCcccCCcccccccccccc-CCCcccCCCCCceeeCCCceeeecCCCCCeeeeCC------
Q 006787 402 LRAIC-AGFKEA-----TEPQICLTGDLETNECLERNG-GCWQDTQANITACKDTFRGRLCECPIVKGVQYRGD------ 468 (631)
Q Consensus 402 ~~~~C-~Gf~~~-----~~g~~C~~~~~d~deC~~~~~-~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gd------ 468 (631)
+.+.| +||.+. .++..|. ++|||..... .|. +++.|+++.++|+|.|++ ||.....
T Consensus 19 ~~C~C~~G~~g~~~~~~~~~~~C~----dideC~~~~~~~C~-----~~~~C~n~~g~y~C~C~~--Gy~g~~~~~~~~~ 87 (143)
T 2bou_A 19 TACRCNPGFSSFSEIITTPMETCD----DINECATLSKVSCG-----KFSDCWNTEGSYDCVCSP--GYEPVSGAKTFKN 87 (143)
T ss_dssp SCEEECTTEECSSSSBCSTTCCCE----ECCGGGC----CCC-----TTEEEEECSSCEEEEECT--TEEETTCCSCBSS
T ss_pred CEEeCCCCCcCccccccCCCCcCC----ccccccCCCCCCCC-----CCCEEEcCCCCeEeECCC--CcccCcCcccccc
Confidence 67788 999863 2457897 6899987632 598 779999999999999999 7755422
Q ss_pred --CccceeecCCCcccCCCCCCCCCCCCCCccccceeCC-CceeeCCCCcccCC--CccccCcCcc
Q 006787 469 --GYISCQAYGPARCSINNGGCWSDTKNGLTFSACSESQ-ITGCHCPKGFRGDG--HKCEDINECK 529 (631)
Q Consensus 469 --g~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g~~--~~C~dideC~ 529 (631)
+ ..|+++ +||...+..|... +.|+++. +|.|.|++||.|.. ..|+++++|.
T Consensus 88 ~~~-~~C~di--deC~~~~~~C~~~-------~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~~~~C~ 143 (143)
T 2bou_A 88 ESE-NTCQDV--DECSSGQHQCDSS-------TVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTVCE 143 (143)
T ss_dssp GGG-CCEEEC--CHHHHTCCCCCTT-------SEEEECSSCEEEECCSSSCBCTTCCSSBTTCCBC
T ss_pred CCC-CCcCCc--cCccCcCCCCCCC-------CEEECCCCCEEeeCCCCcccCCCCccCccCCccC
Confidence 3 469987 9999766778765 7899999 99999999999764 6777877774
No 17
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.14 E-value=5.4e-11 Score=104.95 Aligned_cols=87 Identities=18% Similarity=0.384 Sum_probs=68.4
Q ss_pred eeecCCCcccCCC--CCCCCCCCCCCccccceeCC-CceeeCCCCcccCCCccccC---cCccCC-CCCCCCCCeeeecC
Q 006787 473 CQAYGPARCSINN--GGCWSDTKNGLTFSACSESQ-ITGCHCPKGFRGDGHKCEDI---NECKER-SACQCDGCSCQNTW 545 (631)
Q Consensus 473 C~~i~~~~C~~~~--~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g~~~~C~di---deC~~~-~~C~~~~~~C~nt~ 545 (631)
+.|+ |+|..++ ..|.+.|.++ ++|+++. +|.|.|++||.|+ .|+++ +||..+ +.|. ++|+|+.
T Consensus 3 ~~d~--d~C~~~p~~~~C~~~C~~~---g~C~~~~~~y~C~C~~G~~G~--~C~~~~~~~~C~~~~~~C~---~~C~n~~ 72 (114)
T 1aut_L 3 HVDG--DQCLVLPLEHPCASLCCGH---GTCIDGIGSFSCDCRSGWEGR--FCQREVSFLNCSLDNGGCT---HYCLEEV 72 (114)
T ss_dssp -------CCCCCSSCCSSSSTTTTS---EEECCCSSCCCEEECTTEEST--TSCEECCSSSSSSGGGGCS---SEEEECS
T ss_pred ceec--ccccCCCccccccccCCCc---CCCCCCCCCcEeeCCCCCcCC--CcCcCCcCCcCcCCCCCCC---CEeECCC
Confidence 5555 8888766 4566666665 7899998 9999999999987 69864 579863 5787 6999999
Q ss_pred CCeEEecCCCCeecCCCCceeecc
Q 006787 546 GGFECKCKGNLLFIKEQDACIERN 569 (631)
Q Consensus 546 Gsy~C~C~~G~~~~~d~~~C~~~~ 569 (631)
|+|+|.|++||.+..++.+|.+..
T Consensus 73 g~y~C~C~~G~~~~~~g~~C~~~~ 96 (114)
T 1aut_L 73 GWRRCSCAPGYKLGDDLLQCHPAV 96 (114)
T ss_dssp SSEEEECCTTEEECTTSSCEEECS
T ss_pred CCEEeECCCCeeECCCCCccCcCc
Confidence 999999999999999999998753
No 18
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.12 E-value=4.2e-11 Score=110.42 Aligned_cols=83 Identities=22% Similarity=0.525 Sum_probs=66.0
Q ss_pred cceeecCCCcccCCCCCCCCCCCCCCccccceeCC-CceeeCCCCcccCCCccccCcCccCC-CCCCCCCCee-eecCCC
Q 006787 471 ISCQAYGPARCSINNGGCWSDTKNGLTFSACSESQ-ITGCHCPKGFRGDGHKCEDINECKER-SACQCDGCSC-QNTWGG 547 (631)
Q Consensus 471 ~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g~~~~C~dideC~~~-~~C~~~~~~C-~nt~Gs 547 (631)
..|.++ |+|..+ +|.+. ++|+++. +|.|.|++||.|. .|+++|||... ++|. ++| +|+.|+
T Consensus 43 ~~c~di--deC~~~--pC~n~-------g~C~~~~~~y~C~C~~G~~G~--~C~~~deC~~~~~~C~---~~C~~n~~g~ 106 (146)
T 1x7a_L 43 KQYVDG--DQCEPN--PCLNG-------GLCKDDINSYECWCQVGFEGK--NCELDATCNIKNGRCK---QFCKTGADSK 106 (146)
T ss_dssp ---------CCSSC--SSCTT-------CEEEECSSCEEEECCSSEEST--TTCEECCTTSGGGSCS---SBCCCCSSSC
T ss_pred ccCCCc--CcCCCC--CCCCC-------CEeECCCCCEEEecCCCCcCC--cCCCCccccCCCCCCc---CCCCCCCCCC
Confidence 358887 999853 46544 7899999 9999999999976 89999999985 5787 599 999999
Q ss_pred eEEecCCCCeecCCCCceeecc
Q 006787 548 FECKCKGNLLFIKEQDACIERN 569 (631)
Q Consensus 548 y~C~C~~G~~~~~d~~~C~~~~ 569 (631)
|+|.|++||.+..++.+|....
T Consensus 107 y~C~C~~Gy~l~~dG~~C~~~~ 128 (146)
T 1x7a_L 107 VLCSCTTGYRLAPDQKSCKPAV 128 (146)
T ss_dssp CCCBCCTTEEECTTSSSEEECS
T ss_pred EEeEcCCCcEeCCCCCcCCCCC
Confidence 9999999999999999998753
No 19
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.06 E-value=1.1e-10 Score=97.54 Aligned_cols=77 Identities=21% Similarity=0.430 Sum_probs=63.5
Q ss_pred ccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeee-CCCccceeecCCCcccCCCCCCCCCCCCCCccccce
Q 006787 424 ETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYR-GDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACS 502 (631)
Q Consensus 424 d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~-gdg~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~ 502 (631)
|+|||..+++.|. + +.|+++.++|+|.|++ ||... .++ +.|+++ |||...+..|.. +.|+
T Consensus 2 dideC~~~~~~C~-----~-g~C~n~~g~y~C~C~~--Gy~~~~~~g-~~C~di--deC~~~~~~C~~--------~~C~ 62 (86)
T 1lmj_A 2 DIDECRISPDLCG-----R-GQCVNTPGDFECKCDE--GYESGFMMM-KNCMDI--DECQRDPLLCRG--------GVCH 62 (86)
T ss_dssp CCCTTTTCSSTTT-----T-SCEEEETTEEEECCCS--SEEECTTTS-SSEEEC--CHHHHCSSTTTT--------SEEE
T ss_pred ccccccCCCCCCC-----C-CEEECCCCCEEeeCCC--CcCccCCCC-CccCCc--ccccCCCCcCCC--------CEeE
Confidence 6899998888897 4 4999999999999999 77654 235 679987 999987766752 5699
Q ss_pred eCC-CceeeCCCCcccCC
Q 006787 503 ESQ-ITGCHCPKGFRGDG 519 (631)
Q Consensus 503 ~~~-~~~C~C~~Gy~g~~ 519 (631)
++. +|.|.|++||.++.
T Consensus 63 n~~g~y~C~C~~G~~~~~ 80 (86)
T 1lmj_A 63 NTEGSYRCECPPGHQLSP 80 (86)
T ss_dssp EETTEEEEESCTTSCCCS
T ss_pred cCCCCEEEECcCCcccCC
Confidence 999 99999999999753
No 20
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.05 E-value=2.2e-10 Score=104.19 Aligned_cols=102 Identities=25% Similarity=0.651 Sum_probs=74.0
Q ss_pred ccccccc-cCccccCCCCcccCCccccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCcccee-ecC
Q 006787 400 AVLRAIC-AGFKEATEPQICLTGDLETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQ-AYG 477 (631)
Q Consensus 400 ~v~~~~C-~Gf~~~~~g~~C~~~~~d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~-~i~ 477 (631)
+.+.+.| +||. +..|.. ++++|...+ |. +++.|+++.++|+|.|++ || .|. .|+ ++
T Consensus 26 g~~~C~C~~Gy~----G~~C~~---~~~~C~~~~--C~-----~~~~C~~~~g~~~C~C~~--G~--~G~---~C~~~~- 83 (135)
T 2vj3_A 26 GSFECQCLQGYT----GPRCEI---DVNECVSNP--CQ-----NDATCLDQIGEFQCICMP--GY--EGV---HCEVNT- 83 (135)
T ss_dssp SSEEEECCTTEE----STTSCE---ECCTTTTCC--CC-----SSCEEEECSSCEEEECCT--TE--ESS---SSCEEC-
T ss_pred CCEEEECCCCCc----CCcccc---cCccCCCCC--CC-----CCCEEeCCCCCceeeCCC--CC--cCC---cceecC-
Confidence 3577888 9995 457862 688998765 88 779999999999999999 55 554 486 44
Q ss_pred CCcccCCCCCCCCCCCCCCccccceeCC-CceeeCCCCcccCCCccc-cCcCccCC-CCCC
Q 006787 478 PARCSINNGGCWSDTKNGLTFSACSESQ-ITGCHCPKGFRGDGHKCE-DINECKER-SACQ 535 (631)
Q Consensus 478 ~~~C~~~~~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g~~~~C~-dideC~~~-~~C~ 535 (631)
++|... .|... ++|+++. +|.|.|++||.|. .|+ +||||... +.|.
T Consensus 84 -~~C~~~--~C~~~-------g~C~~~~g~~~C~C~~G~~G~--~C~~~i~~C~~~~~~c~ 132 (135)
T 2vj3_A 84 -DECASS--PCLHN-------GRCLDKINEFQCECPTGFTGH--LCQVDLHHILDAQKMVW 132 (135)
T ss_dssp -CTTTTC--CSTTT-------CEEEECSSCEEEECCTTEESS--SSCEECC----------
T ss_pred -CcccCC--CcCCC-------CEeECCCCCeEEECCCCCcCC--ccCccCccccCCCccee
Confidence 889753 46544 7899998 9999999999986 896 99999875 3443
No 21
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.04 E-value=9e-11 Score=126.34 Aligned_cols=79 Identities=34% Similarity=0.825 Sum_probs=67.8
Q ss_pred CcccCCCCCCCCCCCCCCccccceeCC-CceeeCCCCccc-CCCccccCcCccCCCCCCCCCCeeeecCCCeEEecCCCC
Q 006787 479 ARCSINNGGCWSDTKNGLTFSACSESQ-ITGCHCPKGFRG-DGHKCEDINECKERSACQCDGCSCQNTWGGFECKCKGNL 556 (631)
Q Consensus 479 ~~C~~~~~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g-~~~~C~dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~ 556 (631)
|||..++..|.+. |.++. +|.|.|++||++ ++..|+|||||...++|. +.|+|+.|+|+|.|++||
T Consensus 1 ~eC~~~~~~c~~~---------C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~~~~C~---~~C~n~~g~~~C~C~~g~ 68 (400)
T 3p5b_L 1 NECLDNNGGCSHV---------CNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS---QLCVNLEGGYKCQCEEGF 68 (400)
T ss_dssp CCTTTTGGGCSSE---------EEECSSSEEEECCTTEEECSSSCEEECCCCSTTSSCS---SCCBCCSSSCBCCCCTTC
T ss_pred CcccCCCCCCCCE---------eECCCCCeEEECCCCCCcCCCCcccCchhhhccCCCC---CccCCCccceeeeccccc
Confidence 5787766666644 99999 999999999995 457899999998656898 699999999999999999
Q ss_pred eecCCCCceeecc
Q 006787 557 LFIKEQDACIERN 569 (631)
Q Consensus 557 ~~~~d~~~C~~~~ 569 (631)
.+..++.+|....
T Consensus 69 ~~~~~~~~C~~~~ 81 (400)
T 3p5b_L 69 QLDPHTKACKAVG 81 (400)
T ss_dssp CCCTTTSSCCCST
T ss_pred cccccccceeecc
Confidence 9999999998653
No 22
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.99 E-value=8e-10 Score=127.37 Aligned_cols=105 Identities=29% Similarity=0.645 Sum_probs=80.7
Q ss_pred CceeeCCC--ceeeecCCCCCeeeeCCCccceeecCCCcccCCCCCCCCCCCCCCccccceeCC-CceeeCCCCccc-CC
Q 006787 444 TACKDTFR--GRLCECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSESQ-ITGCHCPKGFRG-DG 519 (631)
Q Consensus 444 ~~C~~~~g--~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g-~~ 519 (631)
+.|++... .+.+.|+. | ..+.. ..| + ++||..+++.|.+. |.++. +|.|.|++||++ ++
T Consensus 266 g~Ci~~~~~Cd~~~dC~d--g--sDe~~-~~C-~--~~eC~~~~~~C~~~---------C~~~~~~~~C~C~~G~~~~~~ 328 (699)
T 1n7d_A 266 GECITLDKVCNMARDCRD--W--SDEPI-KEC-G--TNECLDNNGGCSHV---------CNDLKIGYECLCPDGFQLVAQ 328 (699)
T ss_dssp SCCCCSSCCSCSSCCSSS--S--CSCCC-SSC-C--CCCTTSSTTTSCTT---------CCCCTTCCCCCCCSSSCCCSS
T ss_pred CcEeCCcccccccceecC--c--ccccc-ccc-c--cccccccccCcCCC---------cccCCCCcEEeCCCCeEcCCC
Confidence 45654322 24456766 3 22222 235 2 38898877778654 99988 999999999995 45
Q ss_pred CccccCcCccCCCCCCCCCCeeeecCCCeEEecCCCCeecCCCCceeec
Q 006787 520 HKCEDINECKERSACQCDGCSCQNTWGGFECKCKGNLLFIKEQDACIER 568 (631)
Q Consensus 520 ~~C~dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C~~~ 568 (631)
+.|+|||||...++|. ++|+|+.|+|+|.|++||.+..++++|...
T Consensus 329 ~~C~dideC~~~~~C~---~~C~n~~g~y~C~C~~G~~~~~~~~~C~~~ 374 (699)
T 1n7d_A 329 RRCEDIDECQDPDTCS---QLCVNLEGGYKCQCEEGFQLDPHTKACKAV 374 (699)
T ss_dssp SCCCCCCCCSSSSSCT---TTCCBCSSCBCCCCCSSCBCCSSCCCCBCC
T ss_pred CcccCccccCCCCccc---cccccCCCCeeeeeecccccCCCCCccccc
Confidence 7899999998766898 799999999999999999999999999864
No 23
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.99 E-value=1.1e-10 Score=125.18 Aligned_cols=80 Identities=34% Similarity=0.882 Sum_probs=26.1
Q ss_pred CCcccCCCCCCCCCCCCCCccccceeCC-CceeeCCCCcc--cCCCccccCcCccCCCCCCCCCCeeeecCCCeEEecCC
Q 006787 478 PARCSINNGGCWSDTKNGLTFSACSESQ-ITGCHCPKGFR--GDGHKCEDINECKERSACQCDGCSCQNTWGGFECKCKG 554 (631)
Q Consensus 478 ~~~C~~~~~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~--g~~~~C~dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~ 554 (631)
+|||..++..|.+. |.+.. +|.|.|++||+ +++..|+|+|||...++|. +.|+|+.|+|+|.|++
T Consensus 3 ~~~C~~~~~~c~~~---------C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~---~~C~~~~g~~~C~C~~ 70 (386)
T 3v65_B 3 EENCNVNNGGCAQK---------CQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCS---QGCTNSEGAFQCWCEA 70 (386)
T ss_dssp ----------------------------------------------------------CCT---TEEC-----CCEECCT
T ss_pred cCcccCCCCCCCCC---------CcCCCCCcEeECCCCceECCCCCccCccceeCCcCccc---CcCCCCCCCCeEEECC
Confidence 38998888888765 87777 79999999998 4567999999998546998 6799999999999999
Q ss_pred CCeecCCCCceeecc
Q 006787 555 NLLFIKEQDACIERN 569 (631)
Q Consensus 555 G~~~~~d~~~C~~~~ 569 (631)
||.+..++++|+...
T Consensus 71 g~~l~~d~~~C~~~~ 85 (386)
T 3v65_B 71 GYELRPDRRSCKALG 85 (386)
T ss_dssp TEEECTTSSCEEECS
T ss_pred CceEcCCCCeECCcc
Confidence 999999999998643
No 24
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.98 E-value=1.7e-10 Score=110.88 Aligned_cols=82 Identities=22% Similarity=0.588 Sum_probs=36.4
Q ss_pred ceeecCCCcccCCCCCCCCCCCCCCccccceeCC-CceeeCCCCcccCCCcccc-C-cCccCC-CCCCCCCCeeeecCCC
Q 006787 472 SCQAYGPARCSINNGGCWSDTKNGLTFSACSESQ-ITGCHCPKGFRGDGHKCED-I-NECKER-SACQCDGCSCQNTWGG 547 (631)
Q Consensus 472 ~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g~~~~C~d-i-deC~~~-~~C~~~~~~C~nt~Gs 547 (631)
.|.++ ++|..+ +|.+. ++|++.. +|.|.|++||.|. .|++ | |+|... ++|. ++|+|+.|+
T Consensus 38 ~c~di--deC~~~--pC~ng-------g~C~n~~g~y~C~C~~Gf~G~--~Ce~~i~deC~~~~~~C~---~~C~n~~gs 101 (195)
T 1nfu_B 38 KYKDG--DQCETS--PCQNQ-------GKCKDGLGEYTCTCLEGFEGK--NCELFTRKLCSLDNGDCD---QFCHEEQNS 101 (195)
T ss_dssp --------------------------------------------------------CCGGGTGGGGCS---SEEEEETTE
T ss_pred cCCCC--cccCCC--CCCCC-------CEeECCCCCeeEeCCCCceec--cccccccccccCCCCCCC---CEeECCCCC
Confidence 58887 999853 46544 7899998 9999999999976 8996 6 899874 5788 599999999
Q ss_pred eEEecCCCCeecCCCCceeecc
Q 006787 548 FECKCKGNLLFIKEQDACIERN 569 (631)
Q Consensus 548 y~C~C~~G~~~~~d~~~C~~~~ 569 (631)
|+|.|++||.+..++..|....
T Consensus 102 y~C~C~~Gy~l~~dG~~C~~~~ 123 (195)
T 1nfu_B 102 VVCSCARGYTLADNGKACIPTG 123 (195)
T ss_dssp EEEECCTTEEECTTSSCEEESS
T ss_pred eEEECCCCceeCCCCCccccCC
Confidence 9999999999999999998753
No 25
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.98 E-value=4.1e-10 Score=103.71 Aligned_cols=84 Identities=29% Similarity=0.692 Sum_probs=64.6
Q ss_pred CcccCCccccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCcccCCCCCCCCCCCCC
Q 006787 416 QICLTGDLETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNG 495 (631)
Q Consensus 416 ~~C~~~~~d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~~~~~C~~~~~~g 495 (631)
..|. |+|+|..++ |. +++.|+++.++|.|.|++ || .|. .|+++ ++|...++.|.+.
T Consensus 43 ~~c~----dideC~~~p--C~-----n~g~C~~~~~~y~C~C~~--G~--~G~---~C~~~--deC~~~~~~C~~~---- 98 (146)
T 1x7a_L 43 KQYV----DGDQCEPNP--CL-----NGGLCKDDINSYECWCQV--GF--EGK---NCELD--ATCNIKNGRCKQF---- 98 (146)
T ss_dssp -----------CCSSCS--SC-----TTCEEEECSSCEEEECCS--SE--EST---TTCEE--CCTTSGGGSCSSB----
T ss_pred ccCC----CcCcCCCCC--CC-----CCCEeECCCCCEEEecCC--CC--cCC---cCCCC--ccccCCCCCCcCC----
Confidence 3476 689998766 98 779999999999999999 55 544 59987 9998877777654
Q ss_pred Cccccc-eeCC-CceeeCCCCcc--cCCCccccCcCc
Q 006787 496 LTFSAC-SESQ-ITGCHCPKGFR--GDGHKCEDINEC 528 (631)
Q Consensus 496 ~~~~~C-~~~~-~~~C~C~~Gy~--g~~~~C~dideC 528 (631)
| +++. +|.|.|++||. +++..|++++++
T Consensus 99 -----C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~~~~ 130 (146)
T 1x7a_L 99 -----CKTGADSKVLCSCTTGYRLAPDQKSCKPAVPF 130 (146)
T ss_dssp -----CCCCSSSCCCCBCCTTEEECTTSSSEEECSSS
T ss_pred -----CCCCCCCCEEeEcCCCcEeCCCCCcCCCCCCC
Confidence 9 8888 99999999999 556789988775
No 26
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.97 E-value=2.1e-10 Score=96.81 Aligned_cols=80 Identities=21% Similarity=0.497 Sum_probs=64.1
Q ss_pred ceeeecCCCCCeeeeCCCccceeecCCCcccCCCCCCCCCCCCCCccccceeCC-CceeeCCCCcccCCCccc--cCcCc
Q 006787 452 GRLCECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSESQ-ITGCHCPKGFRGDGHKCE--DINEC 528 (631)
Q Consensus 452 ~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g~~~~C~--dideC 528 (631)
+|+|.|++ || .+. .|+ + ++|...+ |++.. +|.|.|++||. .|+ ++|+|
T Consensus 1 sy~C~C~~--g~--~g~---~c~-~--~~c~~~p---------------C~n~~~~y~C~C~~G~~----~C~~~~~~~C 51 (91)
T 1tpg_A 1 SYQVICRD--EK--TQM---IYQ-Q--HQSWLRP---------------VLRSNRVEYCWCNSGRA----QCHSVPVKSC 51 (91)
T ss_dssp CCCCCCBC--SS--SCC---BCC-S--SCEEEEE---------------CSSSSCEEEEECSSSCC----BCCEECEEEC
T ss_pred CeeeECCC--CC--cCC---eEC-C--CcccCCc---------------cccCCCCcEeECCCCCc----ccccCcCCcc
Confidence 58999999 55 444 363 4 7775422 66666 89999999996 786 89999
Q ss_pred cCCCCCCCCCCeeeecC--CCeEEecCCCCeecCCCCcee
Q 006787 529 KERSACQCDGCSCQNTW--GGFECKCKGNLLFIKEQDACI 566 (631)
Q Consensus 529 ~~~~~C~~~~~~C~nt~--Gsy~C~C~~G~~~~~d~~~C~ 566 (631)
..+ ||. ++++|+++. ++|+|.|++||. |..|.
T Consensus 52 ~~~-pC~-ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce 85 (91)
T 1tpg_A 52 SEP-RCF-NGGTCQQALYFSDFVCQCPEGFA----GKSCE 85 (91)
T ss_dssp SSC-CSC-TTCEEEEESSSSCEEEECCTTCB----SSSCC
T ss_pred cCC-CCC-CCCEeecCCCCCCeEeECCCCCc----CCcCC
Confidence 986 999 899999998 999999999995 56775
No 27
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.96 E-value=1.1e-09 Score=90.53 Aligned_cols=73 Identities=29% Similarity=0.648 Sum_probs=58.9
Q ss_pred ccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCcccCCCCCCCCCCCCCCcccccee
Q 006787 424 ETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSE 503 (631)
Q Consensus 424 d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~ 503 (631)
|+|||.. +..|. + +.|+++.++|+|.|++ ||.+ ++ +.|+++ ++|.. ..+|.+ ++|++
T Consensus 4 dideC~~-~~~C~-----~-g~C~n~~g~y~C~C~~--Gy~~--~g-~~C~di--deC~~-~~~C~~--------~~C~n 60 (82)
T 1emn_A 4 DMDECKE-PDVCK-----H-GQCINTDGSYRCECPF--GYIL--AG-NECVDT--DECSV-GNPCGN--------GTCKN 60 (82)
T ss_dssp CCCSSSS-TTSCS-----S-SEECCCSSCCCEECCT--TEEE--ET-TEEEEC--CGGGT-CCTTSS--------SCEEE
T ss_pred ccccCCC-CCCcC-----C-CEEEecCCCEEEECCC--CeEC--CC-CccCCc--ccccC-CCCCCC--------CEeEC
Confidence 6899986 44587 4 7999999999999999 7655 45 569987 99985 345642 45999
Q ss_pred CC-CceeeCCCCcccCC
Q 006787 504 SQ-ITGCHCPKGFRGDG 519 (631)
Q Consensus 504 ~~-~~~C~C~~Gy~g~~ 519 (631)
+. +|.|.|++||.|++
T Consensus 61 ~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 61 VIGGFECTCEEGFEPGP 77 (82)
T ss_dssp CSSSEEECCSSSSCCCS
T ss_pred CCCCEEeECCCCeEeCC
Confidence 99 99999999999875
No 28
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.95 E-value=2.5e-10 Score=103.63 Aligned_cols=82 Identities=22% Similarity=0.588 Sum_probs=36.1
Q ss_pred ceeecCCCcccCCCCCCCCCCCCCCccccceeCC-CceeeCCCCcccCCCcccc-C-cCccCC-CCCCCCCCeeeecCCC
Q 006787 472 SCQAYGPARCSINNGGCWSDTKNGLTFSACSESQ-ITGCHCPKGFRGDGHKCED-I-NECKER-SACQCDGCSCQNTWGG 547 (631)
Q Consensus 472 ~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g~~~~C~d-i-deC~~~-~~C~~~~~~C~nt~Gs 547 (631)
.|.++ ++|..+ +|.+. ++|+++. +|.|.|++||.|. .|++ | |+|... ++|. ++|+|+.|+
T Consensus 38 ~c~d~--d~C~~~--pC~n~-------g~C~~~~~~y~C~C~~G~~G~--~C~~~i~d~C~~~~~~C~---~~C~~~~g~ 101 (134)
T 2vh0_B 38 KYKDG--DQCETS--PCQNQ-------GKCKDGLGEYTCTCLEGFEGK--NCELFTRKLCSLDNGDCD---QFCHEEQNS 101 (134)
T ss_dssp --------------------------------------------------------CCGGGTGGGGCS---SEEEEETTE
T ss_pred cCCCc--CcCCCC--CCCCc-------CCcccCCCCEEeeCCCCccCC--ccccCCCCccccCCCCCC---CEeECCCCC
Confidence 58877 899853 46544 7799998 9999999999976 8997 7 899874 5788 599999999
Q ss_pred eEEecCCCCeecCCCCceeecc
Q 006787 548 FECKCKGNLLFIKEQDACIERN 569 (631)
Q Consensus 548 y~C~C~~G~~~~~d~~~C~~~~ 569 (631)
|+|.|++||.+..++.+|....
T Consensus 102 y~C~C~~Gy~l~~~g~~C~~~~ 123 (134)
T 2vh0_B 102 VVCSCARGYTLADNGKACIPTG 123 (134)
T ss_dssp EEEECCTTEEECTTSSCEEESS
T ss_pred EEEECCCCcEECCCCCccCcCC
Confidence 9999999999999999998653
No 29
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.94 E-value=5.6e-10 Score=129.84 Aligned_cols=106 Identities=28% Similarity=0.636 Sum_probs=82.7
Q ss_pred CceeeCCC--ceeeecCCCCCeeeeCCCccceeecCCCcccCCCCCCCCCCCCCCccccceeCC-CceeeCCCCccc-CC
Q 006787 444 TACKDTFR--GRLCECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSESQ-ITGCHCPKGFRG-DG 519 (631)
Q Consensus 444 ~~C~~~~g--~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g-~~ 519 (631)
+.|++... ...+.|+. | ..++. ..|. +++|..+++.|.+. |.++. +|.|.|++||.+ ++
T Consensus 284 G~Ci~~~~~Cd~~~dC~d--g--sDe~~-~~C~---~~~C~~~~~~C~~~---------C~~~~~~y~C~C~~Gy~l~~g 346 (791)
T 3m0c_C 284 GECITLDKVCNMARDCRD--W--SDEPI-KECG---TNECLDNNGGCSHV---------CNDLKIGYECLCPDGFQLVAQ 346 (791)
T ss_dssp SCCCCSSCCSCSSCCSSS--S--CSCCC-TTBS---CCSTTTGGGGCSSE---------EEECSBSEEEECCTTCEEETT
T ss_pred CcccccccccCCcccccc--c--cCccc-cccc---cccccccccCcccc---------ccCCCCCcccCCCCCCccCCC
Confidence 56765432 24567877 3 33333 3463 37888776677654 99999 999999999985 56
Q ss_pred CccccCcCccCCCCCCCCCCeeeecCCCeEEecCCCCeecCCCCceeecc
Q 006787 520 HKCEDINECKERSACQCDGCSCQNTWGGFECKCKGNLLFIKEQDACIERN 569 (631)
Q Consensus 520 ~~C~dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C~~~~ 569 (631)
..|+|||||....+|. +.|+|+.|+|+|.|++||.+..++++|+...
T Consensus 347 ~~C~dideC~~~~~C~---~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~~ 393 (791)
T 3m0c_C 347 RRCEDIDECQDPDTCS---QLCVNLEGGYKCQCEEGFQLDPHTKACKAVG 393 (791)
T ss_dssp TEEECCCCCSSSSSCT---TTCCBCSSCBCCCCCSSEECCSSCCCCEETT
T ss_pred CccccCcccCCCCCCC---CeeecCCCCceeecCCCCEeCCCCceeeecc
Confidence 7999999999656787 7999999999999999999999999998753
No 30
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.94 E-value=6.1e-10 Score=93.18 Aligned_cols=81 Identities=31% Similarity=0.648 Sum_probs=63.9
Q ss_pred ccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCcccCCCCCCCCCCCCCCcccccee
Q 006787 424 ETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSE 503 (631)
Q Consensus 424 d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~ 503 (631)
|+|||..++..|. ++.|+++.++|+|.|++ ||.+..++ +.|+++ ++|.. .+|.. .|++
T Consensus 2 dideC~~~~~~C~------~~~C~n~~g~y~C~C~~--G~~~~~~g-~~C~di--deC~~--~~C~~---------~C~n 59 (87)
T 1z6c_A 2 DVDECSLKPSICG------TAVCKNIPGDFECECPE--GYRYNLKS-KSCEDI--DECSE--NMCAQ---------LCVN 59 (87)
T ss_dssp CSCSSSSSSSSBT------TSSCCCBTTBCCCSSST--TCEEETTT-TEEECC--CHHHH--SCCSS---------EECC
T ss_pred ccccccCCCCCCC------CCEeECCCCCEEEECCC--CceECCCC-CcCCCc--CeeCC--CCCCC---------EEEc
Confidence 6899998887783 38999999999999999 99888888 789987 99975 35753 4999
Q ss_pred CC-CceeeCC--CCcc--cCCCccccCc
Q 006787 504 SQ-ITGCHCP--KGFR--GDGHKCEDIN 526 (631)
Q Consensus 504 ~~-~~~C~C~--~Gy~--g~~~~C~did 526 (631)
+. +|.|.|+ +||. .++..|+||+
T Consensus 60 ~~g~y~C~C~g~~G~~~~~~~~~C~di~ 87 (87)
T 1z6c_A 60 YPGGYTCYCDGKKGFKLAQDQKSCEVVS 87 (87)
T ss_dssp CSSSCCEECCSSSCCBCCTTSSSCBCCC
T ss_pred cCCCEEEECCCCcCCcccCCCCcceECc
Confidence 99 9999995 6665 2334566653
No 31
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=98.89 E-value=1.2e-08 Score=111.03 Aligned_cols=112 Identities=18% Similarity=0.141 Sum_probs=78.8
Q ss_pred CcCCCCCCCceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCEEEEEecCccC---------HHHHH----HHHHHcCCcE
Q 006787 61 NFGIPDYGGFMVGSVIYPDKGASGCQPFEGDKPFKSKFPRPTVLLLDRGECY---------FALKV----WHGQQAGAAA 127 (631)
Q Consensus 61 ~FG~~~~~~~i~g~lv~~~~~~~gC~~~~~~~~~~~~~~~~~i~LV~RG~Cs---------F~~Kv----~nAq~aGA~a 127 (631)
.++...+.++++|.||++.+ ...|.... ..+++ |+||||+||.|. |..|. .+|+++||+|
T Consensus 96 ~~s~~tp~~~vta~lV~v~~-~~~~~~~~-~~dvk-----GKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~a 168 (444)
T 3iib_A 96 GGSIATPAQGLSATIVRFDT-LQDLQNAE-AGSLN-----DKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVG 168 (444)
T ss_dssp BTCCCCCTTCEEEEEEEESS-HHHHHTSC-TTTTT-----TCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred cCCCCCCCCCeEEEEEecCC-HHHHhhcc-ccccC-----ccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeE
Confidence 34444456789999998643 23333321 23444 779999999995 77774 5799999999
Q ss_pred EEEEeCCCCCc-----cccCCCCCCCCcCCcccccCccEEEEeHHHHHHHHHHHHcCCEEEEEEEe
Q 006787 128 VLVADSVDEPL-----ITMDSPEESTDANGYVEKIGIPSALIDRAFGLSLKEALKKGEEVVIKLDW 188 (631)
Q Consensus 128 vII~~~~~~~~-----~~m~~~~~~~~~~~~~~~i~IP~~~I~~~~G~~l~~~l~~g~~V~v~l~~ 188 (631)
|||+++..... .+|..+ .....||++.|+.++|+.|+++++.|.+++++++.
T Consensus 169 vIi~~~~~~~~~~~~tg~~~~~---------~~~~~IP~~~Is~~da~~L~~~l~~g~~~~v~l~~ 225 (444)
T 3iib_A 169 IIIRSIGTDHDRMAHTGMMRYE---------EGVTAIPAAAISNPDADLINAMLKRDKEVVISLEL 225 (444)
T ss_dssp EEEECSCSCCSSCCCCCBCCCC---------TTSCCCCEEEECHHHHHHHHHHHTTTCCCEEEEEE
T ss_pred EEEEccCCcccccccCCccccC---------CCCCCCCeEEecHHHHHHHHHHHhCCCCeEEEEEE
Confidence 99999763221 112111 12468999999999999999999988777777766
No 32
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.87 E-value=1.8e-09 Score=95.16 Aligned_cols=93 Identities=27% Similarity=0.573 Sum_probs=65.7
Q ss_pred ccccccccc------cCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecC-CCcccCCCCCCCCCCCCCC
Q 006787 424 ETNECLERN------GGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYG-PARCSINNGGCWSDTKNGL 496 (631)
Q Consensus 424 d~deC~~~~------~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~-~~~C~~~~~~C~~~~~~g~ 496 (631)
|+|||..++ +.|. ++++|+++.++|+|.|++ | |.|+. |+++. .++|...++.|.+.
T Consensus 5 d~d~C~~~p~~~~C~~~C~-----~~g~C~~~~~~y~C~C~~--G--~~G~~---C~~~~~~~~C~~~~~~C~~~----- 67 (114)
T 1aut_L 5 DGDQCLVLPLEHPCASLCC-----GHGTCIDGIGSFSCDCRS--G--WEGRF---CQREVSFLNCSLDNGGCTHY----- 67 (114)
T ss_dssp ---CCCCCSSCCSSSSTTT-----TSEEECCCSSCCCEEECT--T--EESTT---SCEECCSSSSSSGGGGCSSE-----
T ss_pred ecccccCCCccccccccCC-----CcCCCCCCCCCcEeeCCC--C--CcCCC---cCcCCcCCcCcCCCCCCCCE-----
Confidence 578888776 3466 779999999999999999 5 56665 98752 24788766667643
Q ss_pred ccccceeCC-CceeeCCCCccc--CCCccccCcCccCCCCCCCCCCeee
Q 006787 497 TFSACSESQ-ITGCHCPKGFRG--DGHKCEDINECKERSACQCDGCSCQ 542 (631)
Q Consensus 497 ~~~~C~~~~-~~~C~C~~Gy~g--~~~~C~dideC~~~~~C~~~~~~C~ 542 (631)
|+++. +|.|.|++||.+ +++.|+++++ .+|. +.+.|+
T Consensus 68 ----C~n~~g~y~C~C~~G~~~~~~g~~C~~~~~----~pC~-~~~~~i 107 (114)
T 1aut_L 68 ----CLEEVGWRRCSCAPGYKLGDDLLQCHPAVK----FPCG-RPWKRM 107 (114)
T ss_dssp ----EEECSSSEEEECCTTEEECTTSSCEEECSS----SCTT-CCC---
T ss_pred ----eECCCCCEEeECCCCeeECCCCCccCcCcc----cCCC-CCCccC
Confidence 99999 999999999995 4578887544 2666 555554
No 33
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.84 E-value=2.1e-08 Score=108.58 Aligned_cols=102 Identities=23% Similarity=0.269 Sum_probs=73.5
Q ss_pred CCceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCEEEEEecCccCHHHHHHHHHHcCCcEEEEEeCCCCCcc-ccCCCCC
Q 006787 68 GGFMVGSVIYPDKGASGCQPFEGDKPFKSKFPRPTVLLLDRGECYFALKVWHGQQAGAAAVLVADSVDEPLI-TMDSPEE 146 (631)
Q Consensus 68 ~~~i~g~lv~~~~~~~gC~~~~~~~~~~~~~~~~~i~LV~RG~CsF~~Kv~nAq~aGA~avII~~~~~~~~~-~m~~~~~ 146 (631)
.+.++|.|+++. .| .+. +|.+...+++||||+||.|+|.+|+++|+++||+||||+++.+..+. ++..
T Consensus 90 ~g~v~a~lv~~~---~G-~~~----D~~~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~--- 158 (421)
T 2ek8_A 90 NSDVTAELVYVG---LG-TTA----DVAGKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGG--- 158 (421)
T ss_dssp CEEEEEEEEECT---TC-CTT----TTTTSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSS---
T ss_pred CCCcceEEEECC---CC-Chh----hcCCCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCC---
Confidence 457899998732 22 222 23222344779999999999999999999999999999998743321 1110
Q ss_pred CCCcCCcccccCccEEEEeHHHHHHHHHHH---HcCCEEEEEEEe
Q 006787 147 STDANGYVEKIGIPSALIDRAFGLSLKEAL---KKGEEVVIKLDW 188 (631)
Q Consensus 147 ~~~~~~~~~~i~IP~~~I~~~~G~~l~~~l---~~g~~V~v~l~~ 188 (631)
.....||++.|+.++++.|++.+ +.| ++.+++..
T Consensus 159 -------~~~~~IP~~~Is~~~a~~L~~~l~~~~~g-~~~v~l~~ 195 (421)
T 2ek8_A 159 -------SDASFVAAVGITKQEGDALAANLRAGEKI-TATVKVAG 195 (421)
T ss_dssp -------CCTTCCEEEEECHHHHHHHHHHHHTTCCC-EEEEEEES
T ss_pred -------CCCCCccEEEeCHHHHHHHHHHhhhhccC-Cccccccc
Confidence 12468999999999999999999 433 46666665
No 34
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.83 E-value=1.6e-09 Score=99.23 Aligned_cols=82 Identities=20% Similarity=0.527 Sum_probs=66.5
Q ss_pred ceeecCCCcccCCCCCCCCCCCCCCccccceeCC-CceeeCCCCcccCCCcccc-CcCccC----CCCCCCCCCeeeecC
Q 006787 472 SCQAYGPARCSINNGGCWSDTKNGLTFSACSESQ-ITGCHCPKGFRGDGHKCED-INECKE----RSACQCDGCSCQNTW 545 (631)
Q Consensus 472 ~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g~~~~C~d-ideC~~----~~~C~~~~~~C~nt~ 545 (631)
.|.++ ++|... +|.+. ++|+++. +|.|.|++||.|. .|++ +++|.. ++.|. ++|+|+.
T Consensus 43 ~c~di--d~C~~~--pC~n~-------g~C~~~~g~y~C~C~~G~~G~--~C~~~~~~c~~c~~~~~~C~---~~C~~~~ 106 (142)
T 2c4f_L 43 SYSDG--DQCASS--PCQNG-------GSCKDQLQSYICFCLPAFEGR--NCETHKDDQLICVNENGGCE---QYCSDHT 106 (142)
T ss_dssp HHTTC--CGGGGC--CCCTT-------CEEEEETTEEEEECCTTEEST--TSCEEGGGCCSTTTGGGGCS---SEEECCT
T ss_pred cCCcc--CcCcCC--CcCCC-------CEEeCCCCCEEeeCCCCccCC--ccccCccccccccCCCCCcc---CEeECCC
Confidence 46666 899853 46554 7899999 9999999999976 8986 788643 23566 5999999
Q ss_pred C-CeEEecCCCCeecCCCCceeecc
Q 006787 546 G-GFECKCKGNLLFIKEQDACIERN 569 (631)
Q Consensus 546 G-sy~C~C~~G~~~~~d~~~C~~~~ 569 (631)
| +|+|.|++||.+..++.+|....
T Consensus 107 g~~y~C~C~~Gy~l~~dG~~C~~~~ 131 (142)
T 2c4f_L 107 GTKRSCRCHEGYSLLADGVSCTPTV 131 (142)
T ss_dssp TSCCEEECCTTEEECTTSSCEEESS
T ss_pred CCCEEEECCCCceECCCCCCCCCCC
Confidence 9 99999999999999999998754
No 35
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.82 E-value=2.2e-09 Score=93.44 Aligned_cols=77 Identities=34% Similarity=0.657 Sum_probs=36.9
Q ss_pred CCcccCCccccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCcccCCCCCCCCCCCC
Q 006787 415 PQICLTGDLETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKN 494 (631)
Q Consensus 415 g~~C~~~~~d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~~~~~C~~~~~~ 494 (631)
+..|. +|||..++++|. +.|+++.++|.|.|++ ||... ++ +.|+++ |||.. +..|..
T Consensus 24 ~~~Cd-----~neC~~~~~~C~-------~~C~n~~g~y~C~C~~--Gy~g~-~g-~~C~di--deC~~-~~~C~~---- 80 (107)
T 2w2n_E 24 QGAMG-----TNECLDNNGGCS-------YVCNDLKIGYECLCPD--GFQLV-AQ-RRCEDI--DECQD-PDTCSQ---- 80 (107)
T ss_dssp SCCBS-----CCGGGTGGGGCS-------SEEECCSBSCEEECCT--TCEEE-TT-TEEEC-------------------
T ss_pred CCCCc-----CccCcCCCCCCC-------CEeEeCCCCeEEECCC--Ccccc-CC-Cccccc--cccCC-CCCcCC----
Confidence 45673 899998877897 7999999999999999 77654 45 679987 99974 346753
Q ss_pred CCccccceeCC-CceeeCCCCcccCC
Q 006787 495 GLTFSACSESQ-ITGCHCPKGFRGDG 519 (631)
Q Consensus 495 g~~~~~C~~~~-~~~C~C~~Gy~g~~ 519 (631)
.|+|+. +|.|.|++||.++.
T Consensus 81 -----~C~n~~gsy~C~C~~Gy~~~~ 101 (107)
T 2w2n_E 81 -----LCVNLEGGYKCQCEEGFQLDP 101 (107)
T ss_dssp --------------------------
T ss_pred -----eeecCCCCEEEECCCCceECC
Confidence 499999 99999999999753
No 36
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.79 E-value=5.3e-09 Score=108.81 Aligned_cols=76 Identities=25% Similarity=0.710 Sum_probs=65.0
Q ss_pred CcccCCCCCCCCCCCCCCccccceeCC-CceeeCCCCcccCCCccc-cCcCccC--CCCCCCCCCeeeecCCCeEEecCC
Q 006787 479 ARCSINNGGCWSDTKNGLTFSACSESQ-ITGCHCPKGFRGDGHKCE-DINECKE--RSACQCDGCSCQNTWGGFECKCKG 554 (631)
Q Consensus 479 ~~C~~~~~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g~~~~C~-dideC~~--~~~C~~~~~~C~nt~Gsy~C~C~~ 554 (631)
|+|..++ |.+. +.|.+.. +|.|.|++||.|. .|+ |+|||.. .++|. ..|+|+.|+|+|.|++
T Consensus 6 ~~C~~~p--C~~~-------g~C~~~~~~~~C~C~~g~~g~--~C~~~~~eC~~~~~~~C~---~~C~~~~g~~~C~C~~ 71 (317)
T 3h5c_B 6 SPCISQP--CLHN-------GSCQDSIWGYTCTCSPGYEGS--NCELAKNECHPERTDGCQ---HFCLPGQESYTCSCAQ 71 (317)
T ss_dssp CCTTSCC--CTTT-------CCCCCCSSSCCCCCSSSCCSS--SSCCCSSSCCTTCTTSCS---SEEECCSSSCEEECCT
T ss_pred CcCCCCC--CCCC-------CEeECCCCCeEEECCCCCcCC--ccccCcccCCCCCCCCCc---CccccCCCeeEEeccc
Confidence 7887643 5443 7799988 9999999999976 898 9999987 25898 4999999999999999
Q ss_pred CCeecCCCCceeec
Q 006787 555 NLLFIKEQDACIER 568 (631)
Q Consensus 555 G~~~~~d~~~C~~~ 568 (631)
||.+..++.+|.+.
T Consensus 72 g~~~~~~~~~C~~~ 85 (317)
T 3h5c_B 72 GYRLGEDHKQCVPH 85 (317)
T ss_dssp TEECCTTSSCCEEC
T ss_pred cccccccccccccc
Confidence 99998888888873
No 37
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.72 E-value=2.3e-09 Score=114.76 Aligned_cols=82 Identities=28% Similarity=0.714 Sum_probs=22.0
Q ss_pred ccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCcccCCCCCCCCCCCCCCcccccee
Q 006787 424 ETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSE 503 (631)
Q Consensus 424 d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~ 503 (631)
|+|||..+++.|. +.|.++.|+|.|.|++ ||.+.+++ +.|+++ +||. .+..|.+. |.|
T Consensus 2 ~~~~C~~~~~~c~-------~~C~~~~g~~~C~C~~--G~~l~~~~-~~C~d~--~eC~-~~~~C~~~---------C~~ 59 (386)
T 3v65_B 2 GEENCNVNNGGCA-------QKCQMIRGAVQCTCHT--GYRLTEDG-RTCQDV--NECA-EEGYCSQG---------CTN 59 (386)
T ss_dssp ---------------------------------------------------------------CCTTE---------EC-
T ss_pred CcCcccCCCCCCC-------CCCcCCCCCcEeECCC--CceECCCC-CccCcc--ceeC-CcCcccCc---------CCC
Confidence 6899999888898 6999999999999999 99888888 889987 9997 45678754 999
Q ss_pred CC-CceeeCCCCcc--cCCCccccCcC
Q 006787 504 SQ-ITGCHCPKGFR--GDGHKCEDINE 527 (631)
Q Consensus 504 ~~-~~~C~C~~Gy~--g~~~~C~dide 527 (631)
+. +|.|.|++||. .+++.|+.+++
T Consensus 60 ~~g~~~C~C~~g~~l~~d~~~C~~~~~ 86 (386)
T 3v65_B 60 SEGAFQCWCEAGYELRPDRRSCKALGP 86 (386)
T ss_dssp ----CCEECCTTEEECTTSSCEEECSS
T ss_pred CCCCCeEEECCCceEcCCCCeECCccc
Confidence 99 99999999998 44578886654
No 38
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.70 E-value=1.8e-08 Score=108.23 Aligned_cols=79 Identities=33% Similarity=0.719 Sum_probs=64.8
Q ss_pred ccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCcccCCCCCCCCCCCCCCccccceeCC
Q 006787 426 NECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSESQ 505 (631)
Q Consensus 426 deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~~~ 505 (631)
|||..++..|. +.|.|++++|.|.|++ ||.+ .++ +.|+++ |||.. +..|.+. |.|+.
T Consensus 1 ~eC~~~~~~c~-------~~C~~~~~~y~C~C~~--G~~~-~~~-~~C~di--deC~~-~~~C~~~---------C~n~~ 57 (400)
T 3p5b_L 1 NECLDNNGGCS-------HVCNDLKIGYECLCPD--GFQL-VAQ-RRCEDI--DECQD-PDTCSQL---------CVNLE 57 (400)
T ss_dssp CCTTTTGGGCS-------SEEEECSSSEEEECCT--TEEE-CSS-SCEEEC--CCCST-TSSCSSC---------CBCCS
T ss_pred CcccCCCCCCC-------CEeECCCCCeEEECCC--CCCc-CCC-CcccCc--hhhhc-cCCCCCc---------cCCCc
Confidence 58988887777 7999999999999999 8887 466 789987 99984 4577654 99999
Q ss_pred -CceeeCCCCcccCC--CccccCcC
Q 006787 506 -ITGCHCPKGFRGDG--HKCEDINE 527 (631)
Q Consensus 506 -~~~C~C~~Gy~g~~--~~C~dide 527 (631)
+|.|.|++||.+++ ..|.++++
T Consensus 58 g~~~C~C~~g~~~~~~~~~C~~~~~ 82 (400)
T 3p5b_L 58 GGYKCQCEEGFQLDPHTKACKAVGS 82 (400)
T ss_dssp SSCBCCCCTTCCCCTTTSSCCCSTT
T ss_pred cceeeeccccccccccccceeeccc
Confidence 99999999999653 67776543
No 39
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.69 E-value=1.4e-08 Score=92.95 Aligned_cols=80 Identities=29% Similarity=0.700 Sum_probs=61.1
Q ss_pred ccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCcc---cCCCCCCCCCCCCCCcccc
Q 006787 424 ETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARC---SINNGGCWSDTKNGLTFSA 500 (631)
Q Consensus 424 d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C---~~~~~~C~~~~~~g~~~~~ 500 (631)
++|+|..++ |. ++++|+++.++|+|.|++ || .|. .|++. +++| ...++.|.+ .
T Consensus 46 did~C~~~p--C~-----n~g~C~~~~g~y~C~C~~--G~--~G~---~C~~~-~~~c~~c~~~~~~C~~---------~ 101 (142)
T 2c4f_L 46 DGDQCASSP--CQ-----NGGSCKDQLQSYICFCLP--AF--EGR---NCETH-KDDQLICVNENGGCEQ---------Y 101 (142)
T ss_dssp TCCGGGGCC--CC-----TTCEEEEETTEEEEECCT--TE--EST---TSCEE-GGGCCSTTTGGGGCSS---------E
T ss_pred ccCcCcCCC--cC-----CCCEEeCCCCCEEeeCCC--Cc--cCC---ccccC-ccccccccCCCCCccC---------E
Confidence 689998766 98 779999999999999999 55 544 49861 2554 333344443 4
Q ss_pred ceeCC--CceeeCCCCcc--cCCCccccCcC
Q 006787 501 CSESQ--ITGCHCPKGFR--GDGHKCEDINE 527 (631)
Q Consensus 501 C~~~~--~~~C~C~~Gy~--g~~~~C~dide 527 (631)
|+++. +|.|.|++||. +++..|+++++
T Consensus 102 C~~~~g~~y~C~C~~Gy~l~~dG~~C~~~~e 132 (142)
T 2c4f_L 102 CSDHTGTKRSCRCHEGYSLLADGVSCTPTVE 132 (142)
T ss_dssp EECCTTSCCEEECCTTEEECTTSSCEEESSS
T ss_pred eECCCCCCEEEECCCCceECCCCCCCCCCCc
Confidence 98876 79999999999 55679999887
No 40
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.68 E-value=3.1e-09 Score=102.17 Aligned_cols=87 Identities=29% Similarity=0.707 Sum_probs=34.9
Q ss_pred cccCCccccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCC-CcccCCCCCCCCCCCCC
Q 006787 417 ICLTGDLETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGP-ARCSINNGGCWSDTKNG 495 (631)
Q Consensus 417 ~C~~~~~d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~-~~C~~~~~~C~~~~~~g 495 (631)
.|. ++|+|..++ |. +++.|+++.++|.|.|++ || .| ..|++. + ++|...++.|.+.
T Consensus 38 ~c~----dideC~~~p--C~-----ngg~C~n~~g~y~C~C~~--Gf--~G---~~Ce~~-i~deC~~~~~~C~~~---- 94 (195)
T 1nfu_B 38 KYK----DGDQCETSP--CQ-----NQGKCKDGLGEYTCTCLE--GF--EG---KNCELF-TRKLCSLDNGDCDQF---- 94 (195)
T ss_dssp --------------------------------------------------------------CCGGGTGGGGCSSE----
T ss_pred cCC----CCcccCCCC--CC-----CCCEeECCCCCeeEeCCC--Cc--ee---cccccc-ccccccCCCCCCCCE----
Confidence 476 689998766 98 779999999999999999 55 44 459873 4 7898876777654
Q ss_pred CccccceeCC-CceeeCCCCcc--cCCCccccCcCccCCCCCC
Q 006787 496 LTFSACSESQ-ITGCHCPKGFR--GDGHKCEDINECKERSACQ 535 (631)
Q Consensus 496 ~~~~~C~~~~-~~~C~C~~Gy~--g~~~~C~dideC~~~~~C~ 535 (631)
|+++. +|.|.|++||. +++..|+++++ .||.
T Consensus 95 -----C~n~~gsy~C~C~~Gy~l~~dG~~C~~~~~----~PC~ 128 (195)
T 1nfu_B 95 -----CHEEQNSVVCSCARGYTLADNGKACIPTGP----YPCG 128 (195)
T ss_dssp -----EEEETTEEEEECCTTEEECTTSSCEEESSS----SCTT
T ss_pred -----eECCCCCeEEECCCCceeCCCCCccccCCC----CCCC
Confidence 99998 99999999999 55678998752 3676
No 41
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.67 E-value=3.8e-09 Score=98.97 Aligned_cols=104 Identities=20% Similarity=0.447 Sum_probs=69.8
Q ss_pred cccccccc-cCccccCCCCcccCCcccccc--ccccccCCCcccCCCCCceeeCCC----ceeeecCCCCCee-------
Q 006787 399 TAVLRAIC-AGFKEATEPQICLTGDLETNE--CLERNGGCWQDTQANITACKDTFR----GRLCECPIVKGVQ------- 464 (631)
Q Consensus 399 ~~v~~~~C-~Gf~~~~~g~~C~~~~~d~de--C~~~~~~C~~~~~~~~~~C~~~~g----~~~C~C~~~~G~~------- 464 (631)
.+.|++.| +||.+..++..|. ++++ |...+..|.. .+++.|+++.+ +|.|.|++ ||.
T Consensus 21 ~gsy~C~C~~Gy~~~~~g~~C~----d~~~~~C~~~~~~c~~---~~~~~C~~~~~~~~~~~~C~C~~--G~~~~~~C~~ 91 (162)
T 1uzk_A 21 PGSYICDCPPDFELNPTRVGCV----DTRSGNCYLDIRPRGD---NGDTACSNEIGVGVSKASCCCSL--GKAWGTPCEM 91 (162)
T ss_dssp TTEEEEECCTTCEECTTSSBEE----CCCCEEEEEEC-------------CEEEEEEEECHHHHHTTT--CCEETTTTEE
T ss_pred CCCEEEeCCCCCeECCCCCccc----CCCCCcccCCCcccCC---CCCCcccCCcCCcccCceeeCCC--CCCcCCCccc
Confidence 35688888 9999877789999 3555 8765544420 03478888766 67777766 542
Q ss_pred ------------------eeCC--CccceeecCCCcccCCCCCCCCCCCCCCccccceeCC-CceeeCCCCcccCC--Cc
Q 006787 465 ------------------YRGD--GYISCQAYGPARCSINNGGCWSDTKNGLTFSACSESQ-ITGCHCPKGFRGDG--HK 521 (631)
Q Consensus 465 ------------------~~gd--g~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g~~--~~ 521 (631)
|.++ + ..|++| |||...++.|.+ ++|+|+. +|+|.|++||.++. +.
T Consensus 92 C~~~~~~~y~C~C~~g~G~~~~~~~-~~c~di--deC~~~~~~C~~--------g~C~n~~gsy~C~C~~Gy~g~~d~~~ 160 (162)
T 1uzk_A 92 CPAVNTSEYKILCPGGEGFRPNPIT-VILEDI--DECQELPGLCQG--------GKCINTFGSFQCRCPTGYYLNEDTRV 160 (162)
T ss_dssp CCCTTSHHHHHHCTTCTTEEECTTT-CCEEEC--CHHHHCGGGGBT--------SEEEECSSCEEEECCTTCCBCTTTCB
T ss_pred CCCCCCCCceeECCCCCCcccCCCC-CccCcc--ccccCCCCCcCC--------CEeEcCCCCEEeeCCCCccCCCCCCc
Confidence 3333 3 468887 999877667863 4699999 99999999999853 44
Q ss_pred c
Q 006787 522 C 522 (631)
Q Consensus 522 C 522 (631)
|
T Consensus 161 C 161 (162)
T 1uzk_A 161 C 161 (162)
T ss_dssp B
T ss_pred c
Confidence 4
No 42
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.64 E-value=3e-08 Score=90.61 Aligned_cols=89 Identities=30% Similarity=0.738 Sum_probs=66.4
Q ss_pred cccccc-cCccccCCCCcccCCc---------cccccccccccCCCcccCCCCCcee-------eCCCceeeecCCCCCe
Q 006787 401 VLRAIC-AGFKEATEPQICLTGD---------LETNECLERNGGCWQDTQANITACK-------DTFRGRLCECPIVKGV 463 (631)
Q Consensus 401 v~~~~C-~Gf~~~~~g~~C~~~~---------~d~deC~~~~~~C~~~~~~~~~~C~-------~~~g~~~C~C~~~~G~ 463 (631)
.+.+.| +||. +..|.... .++++|..++ |. +++.|+ ++.++|.|.|++ ||
T Consensus 22 ~~~C~C~~G~~----G~~C~~~~~~~~~~~~c~~~~~C~~~~--C~-----~~g~C~~~~~~~~~~~~~~~C~C~~--G~ 88 (143)
T 4d90_A 22 SFSCECPDGFT----DPNCSSVVEVASDEEEPTSAGPCTPNP--CH-----NGGTCEISEAYRGDTFIGYVCKCPR--GF 88 (143)
T ss_dssp CCEEECCTTCC----TTTTCSCCCCTTTTTSCCCCCTTSSCC--CC-----TTCEEEECCCEETTEECCEEEECCT--TE
T ss_pred CEEeECCCCCC----CCCCccCccccccccccccCCcCCCCC--CC-----CCCEecCCCccccCCCCCeEeECcC--CC
Confidence 467788 8995 45565311 1356776554 77 789999 777899999999 55
Q ss_pred eeeCCCcccee-ecCCCcccCCCCCCCCCCCCCCccccceeCC-CceeeCCCCcccC
Q 006787 464 QYRGDGYISCQ-AYGPARCSINNGGCWSDTKNGLTFSACSESQ-ITGCHCPKGFRGD 518 (631)
Q Consensus 464 ~~~gdg~~~C~-~i~~~~C~~~~~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g~ 518 (631)
.|. .|+ ++ ++|... .|... +.|+++. +|.|.|++||.|+
T Consensus 89 --~G~---~C~~~i--~~C~~~--~C~~~-------~~C~~~~g~~~C~C~~G~~G~ 129 (143)
T 4d90_A 89 --NGI---HCQHNI--NECEVE--PCKNG-------GICTDLVANYSCECPGEFMGR 129 (143)
T ss_dssp --EST---TSCEEC--CTTTTC--CSCTT-------CEEEEETTEEEEECCTTCBST
T ss_pred --cCC---CcccCC--CcCCCC--CCCCC-------CEeECCCCCeEeECCCCCccC
Confidence 544 497 76 999843 46544 7899998 9999999999987
No 43
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.64 E-value=4.6e-09 Score=95.27 Aligned_cols=83 Identities=29% Similarity=0.716 Sum_probs=32.3
Q ss_pred cccCCccccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCC-CcccCCCCCCCCCCCCC
Q 006787 417 ICLTGDLETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGP-ARCSINNGGCWSDTKNG 495 (631)
Q Consensus 417 ~C~~~~~d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~-~~C~~~~~~C~~~~~~g 495 (631)
.|. ++|+|..++ |. +++.|+++.++|+|.|++ || .|. .|++. + ++|...++.|.+.
T Consensus 38 ~c~----d~d~C~~~p--C~-----n~g~C~~~~~~y~C~C~~--G~--~G~---~C~~~-i~d~C~~~~~~C~~~---- 94 (134)
T 2vh0_B 38 KYK----DGDQCETSP--CQ-----NQGKCKDGLGEYTCTCLE--GF--EGK---NCELF-TRKLCSLDNGDCDQF---- 94 (134)
T ss_dssp --------------------------------------------------------------CCGGGTGGGGCSSE----
T ss_pred cCC----CcCcCCCCC--CC-----CcCCcccCCCCEEeeCCC--Cc--cCC---ccccC-CCCccccCCCCCCCE----
Confidence 476 689998766 98 778999999999999999 54 544 59873 3 7898766667653
Q ss_pred CccccceeCC-CceeeCCCCcc--cCCCccccCcC
Q 006787 496 LTFSACSESQ-ITGCHCPKGFR--GDGHKCEDINE 527 (631)
Q Consensus 496 ~~~~~C~~~~-~~~C~C~~Gy~--g~~~~C~dide 527 (631)
|+++. +|.|.|++||. +++..|+++++
T Consensus 95 -----C~~~~g~y~C~C~~Gy~l~~~g~~C~~~~~ 124 (134)
T 2vh0_B 95 -----CHEEQNSVVCSCARGYTLADNGKACIPTGP 124 (134)
T ss_dssp -----EEEETTEEEEECCTTEEECTTSSCEEESSS
T ss_pred -----eECCCCCEEEECCCCcEECCCCCccCcCCC
Confidence 99988 99999999999 55678998765
No 44
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.63 E-value=2e-08 Score=104.44 Aligned_cols=81 Identities=27% Similarity=0.742 Sum_probs=65.4
Q ss_pred ccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCcccee-ecCCCcccCC-CCCCCCCCCCCCccccc
Q 006787 424 ETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQ-AYGPARCSIN-NGGCWSDTKNGLTFSAC 501 (631)
Q Consensus 424 d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~-~i~~~~C~~~-~~~C~~~~~~g~~~~~C 501 (631)
|+|+|..++ |. +++.|.++.++|.|.|++ || .|. .|+ ++ ++|... +..|.+. |
T Consensus 4 d~~~C~~~p--C~-----~~g~C~~~~~~~~C~C~~--g~--~g~---~C~~~~--~eC~~~~~~~C~~~---------C 58 (317)
T 3h5c_B 4 GGSPCISQP--CL-----HNGSCQDSIWGYTCTCSP--GY--EGS---NCELAK--NECHPERTDGCQHF---------C 58 (317)
T ss_dssp --CCTTSCC--CT-----TTCCCCCCSSSCCCCCSS--SC--CSS---SSCCCS--SSCCTTCTTSCSSE---------E
T ss_pred cCCcCCCCC--CC-----CCCEeECCCCCeEEECCC--CC--cCC---ccccCc--ccCCCCCCCCCcCc---------c
Confidence 678998877 98 789999999999999999 55 454 498 66 999863 3567653 9
Q ss_pred eeCC-CceeeCCCCcccC--CCccccCcCcc
Q 006787 502 SESQ-ITGCHCPKGFRGD--GHKCEDINECK 529 (631)
Q Consensus 502 ~~~~-~~~C~C~~Gy~g~--~~~C~dideC~ 529 (631)
.++. +|.|.|++||.+. +..|.++++|.
T Consensus 59 ~~~~g~~~C~C~~g~~~~~~~~~C~~~~~c~ 89 (317)
T 3h5c_B 59 LPGQESYTCSCAQGYRLGEDHKQCVPHDQCA 89 (317)
T ss_dssp ECCSSSCEEECCTTEECCTTSSCCEECSSCC
T ss_pred ccCCCeeEEeccccccccccccccccccccc
Confidence 9999 9999999999974 37899999885
No 45
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.56 E-value=1.2e-09 Score=109.27 Aligned_cols=118 Identities=11% Similarity=0.022 Sum_probs=77.3
Q ss_pred CCcccCCccccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCcccCCC----CCC--
Q 006787 415 PQICLTGDLETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARCSINN----GGC-- 488 (631)
Q Consensus 415 g~~C~~~~~d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~~~----~~C-- 488 (631)
+..|. +.+||.+.+ |. ++++|++...+|+|+|++ +|+|.. |+. ++++|.... .+|
T Consensus 93 G~~c~----~~~eC~s~p--C~-----ngG~C~~~~~sy~C~C~~----Gf~G~~---Ce~-~~d~C~n~~~c~s~pC~n 153 (267)
T 4fbr_A 93 GARDK----QNIVAVSIK--SN-----DGGKTLTGTTTYNGEGPI----GFKSEV---TDG-DTYSVENQWGGSAAPWHS 153 (267)
T ss_dssp CCCSS----CCEEEEEEE--CS-----STTSEEEEEEEETTSCCE----EEEEEE---CCC-CEEEEEEECSSTTSCCEE
T ss_pred cCccc----cccccCCCC--CC-----CCCEEecCCccEEeeCCC----CccccC---CCC-CcccccccCCcCCccccC
Confidence 44555 345777766 87 889999999999999999 666543 653 234432110 111
Q ss_pred -----------------CCCCCCCCccccceeCC-CceeeCCCCcccCCCccc-cCcCccCC------------------
Q 006787 489 -----------------WSDTKNGLTFSACSESQ-ITGCHCPKGFRGDGHKCE-DINECKER------------------ 531 (631)
Q Consensus 489 -----------------~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g~~~~C~-dideC~~~------------------ 531 (631)
...|.|+ ++|++.. +|+|.|++||+|. .|+ +|+||...
T Consensus 154 gg~c~~G~~c~~~i~c~~~~c~ng---g~C~dg~~~y~C~Cp~Gf~G~--~c~~~i~ec~~~~~c~~~~c~~gG~~~~~C 228 (267)
T 4fbr_A 154 GGVWVLGTRGKQNVINVDAKSNDG---GKTLSGTMTYNGEGPIGFRGT--LTSPDTYTVENQWGGSTAPWNPGGFWMIGA 228 (267)
T ss_dssp EEEEECCSSTTSCEEEEEEECSST---TSEEEEEEEETTSCCEEEEEE--EEETTEEEEEEECSCTTSCCEEEEEEECCC
T ss_pred CcceecccccccccccCCCCCCCC---CEeeCCCCCeEEeCCCCcccc--ccccccceeccCCCccCCcccCCCeEEEec
Confidence 1224555 7798888 9999999999986 776 56664321
Q ss_pred ----------CCCCCCCCeeeecCCCeEEecCCCCe
Q 006787 532 ----------SACQCDGCSCQNTWGGFECKCKGNLL 557 (631)
Q Consensus 532 ----------~~C~~~~~~C~nt~Gsy~C~C~~G~~ 557 (631)
.+|. ++++|++...+|+|.|++||+
T Consensus 229 ~~g~n~~~c~~~c~-ngGtC~dg~~sy~CeCp~GF~ 263 (267)
T 4fbr_A 229 RNGQNVVALNVASS-DGGKTLAGTMIYNGEGPIGFR 263 (267)
T ss_dssp CTTCCEEEEEEECS-STTSEEEEEEEETTSCCEEEE
T ss_pred CCCCccccCCcCCC-CCCEeeCCCcceeecCCCCcc
Confidence 1445 556677766777777777774
No 46
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=98.56 E-value=5e-08 Score=91.99 Aligned_cols=110 Identities=28% Similarity=0.742 Sum_probs=77.2
Q ss_pred cccc-cCccccCCCCcccCCccccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCcc
Q 006787 403 RAIC-AGFKEATEPQICLTGDLETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARC 481 (631)
Q Consensus 403 ~~~C-~Gf~~~~~g~~C~~~~~d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C 481 (631)
.+.| +||. +..|. .++|.. .|.- .++.|.+ .|+|.|++ | |.|.. |+. |
T Consensus 51 ~C~C~~G~~----G~~C~-----~~~C~~---~C~~----~~g~C~~---~~~C~C~~--G--~~G~~---C~~-----C 99 (169)
T 2vj2_A 51 NKTCMEGWM----GPECN-----RAICRQ---GCSP----KHGSCKL---PGDCRCQY--G--WQGLY---CDK-----C 99 (169)
T ss_dssp CEEECTTEE----STTSC-----EECCCT---TCCT----TTEECSS---TTCCEECT--T--EESSS---SCE-----E
T ss_pred eeECCCCCc----CCCCC-----CCCCCC---CCCC----CCcccCC---CCeeECCC--C--CCCCC---ccc-----C
Confidence 4577 8885 45676 345653 2520 1356765 58999999 5 45554 642 4
Q ss_pred cCCCCCCCCCCCCCCccccceeCCCceeeCCCCcccCCCccc-cCcCccCCCCCCCCCCeeeec-CCCeEEecCCCCe
Q 006787 482 SINNGGCWSDTKNGLTFSACSESQITGCHCPKGFRGDGHKCE-DINECKERSACQCDGCSCQNT-WGGFECKCKGNLL 557 (631)
Q Consensus 482 ~~~~~~C~~~~~~g~~~~~C~~~~~~~C~C~~Gy~g~~~~C~-dideC~~~~~C~~~~~~C~nt-~Gsy~C~C~~G~~ 557 (631)
...+ .|. + ++|+ .+|.|.|++||.|. .|+ ++|+|....+|. ++++|+|+ .++|+|.|++||.
T Consensus 100 ~~~~-~C~----~----g~C~--~~~~C~C~~G~~G~--~C~~~~~~C~~~~~C~-~~g~C~~~~~~~~~C~C~~G~~ 163 (169)
T 2vj2_A 100 IPHP-GCV----H----GICN--EPWQCLCETNWGGQ--LCDKDLNYCGTHQPCL-NGGTCSNTGPDKYQCSCPEGYS 163 (169)
T ss_dssp CCCT-TCS----S----EECS--STTCCEECTTEETT--TTCEESCHHHHTCCCC-TTCEEEECSTTCEEEECCTTCC
T ss_pred CCCC-CCC----C----CCcC--CCCEEeCCCCCCCC--cccCCCCCCCCCCCCC-CCCEEcCCCCCCcEeECCCCCc
Confidence 3321 232 2 3465 36899999999986 898 999998644999 88999997 8999999999995
No 47
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.51 E-value=1.6e-07 Score=107.03 Aligned_cols=107 Identities=15% Similarity=0.125 Sum_probs=69.0
Q ss_pred CCCceEEEEEecCCCCCCCCCCCCCCCCC---CCCCCCEEEEEecCccCHHHHHHHHHHcCCcEEEEEeCCCCC------
Q 006787 67 YGGFMVGSVIYPDKGASGCQPFEGDKPFK---SKFPRPTVLLLDRGECYFALKVWHGQQAGAAAVLVADSVDEP------ 137 (631)
Q Consensus 67 ~~~~i~g~lv~~~~~~~gC~~~~~~~~~~---~~~~~~~i~LV~RG~CsF~~Kv~nAq~aGA~avII~~~~~~~------ 137 (631)
+.++++|.||++. .|+.. +.. .+. +....|+||||+||.|+|.+|++||+++||+|||||++..+.
T Consensus 123 ~~G~v~g~lV~v~---~G~~~-Df~-~L~~~~~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~ 197 (707)
T 3fed_A 123 AQGMPEGDLVYVN---YARTE-DFF-KLEREMGINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQ 197 (707)
T ss_dssp CCBCCEECEEECT---TCCHH-HHH-HHHHTSCCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCC
T ss_pred CCCceEEEEEEec---CCchh-hHH-HHHhccCCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccc
Confidence 3467999999952 56521 100 000 123347899999999999999999999999999999863100
Q ss_pred -----------------ccccCCCCCC-CCcC------------CcccccCccEEEEeHHHHHHHHHHHHc
Q 006787 138 -----------------LITMDSPEES-TDAN------------GYVEKIGIPSALIDRAFGLSLKEALKK 178 (631)
Q Consensus 138 -----------------~~~m~~~~~~-~~~~------------~~~~~i~IP~~~I~~~~G~~l~~~l~~ 178 (631)
+..+..++|. +++. ......+||++-|+..+|+.|++.|..
T Consensus 198 ~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 198 PYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGYPAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp BTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTSCCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cCCCCccCCCccccccceecccCCCCCCCCCCcccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 0000011110 0000 001236899999999999999998864
No 48
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.45 E-value=1.3e-07 Score=79.56 Aligned_cols=84 Identities=27% Similarity=0.612 Sum_probs=59.8
Q ss_pred ccccc-cCccccCCCCcccCCccccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCc
Q 006787 402 LRAIC-AGFKEATEPQICLTGDLETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPAR 480 (631)
Q Consensus 402 ~~~~C-~Gf~~~~~g~~C~~~~~d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~ 480 (631)
|.+.| .||. +..|. +++|...+ |.+..++|+|.|++ ||. .|+.+.+++
T Consensus 2 y~C~C~~g~~----g~~c~-----~~~c~~~p-------------C~n~~~~y~C~C~~--G~~-------~C~~~~~~~ 50 (91)
T 1tpg_A 2 YQVICRDEKT----QMIYQ-----QHQSWLRP-------------VLRSNRVEYCWCNS--GRA-------QCHSVPVKS 50 (91)
T ss_dssp CCCCCBCSSS----CCBCC-----SSCEEEEE-------------CSSSSCEEEEECSS--SCC-------BCCEECEEE
T ss_pred eeeECCCCCc----CCeEC-----CCcccCCc-------------cccCCCCcEeECCC--CCc-------ccccCcCCc
Confidence 56678 8885 34563 67875544 44668899999999 663 486212388
Q ss_pred ccCCCCCCCCCCCCCCccccceeCC---CceeeCCCCcccCCCccc-cCcC
Q 006787 481 CSINNGGCWSDTKNGLTFSACSESQ---ITGCHCPKGFRGDGHKCE-DINE 527 (631)
Q Consensus 481 C~~~~~~C~~~~~~g~~~~~C~~~~---~~~C~C~~Gy~g~~~~C~-dide 527 (631)
|..++ |.+ + ++|++.. +|.|.|++||.|. .|+ +|||
T Consensus 51 C~~~p--C~n----g---g~C~~~~~~~~~~C~C~~G~~G~--~Ce~~ide 90 (91)
T 1tpg_A 51 CSEPR--CFN----G---GTCQQALYFSDFVCQCPEGFAGK--SCEIDTRA 90 (91)
T ss_dssp CSSCC--SCT----T---CEEEEESSSSCEEEECCTTCBSS--SCCBCSSC
T ss_pred ccCCC--CCC----C---CEeecCCCCCCeEeECCCCCcCC--cCCcCCCC
Confidence 98643 544 4 7899863 8999999999986 887 7776
No 49
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.40 E-value=3e-07 Score=106.87 Aligned_cols=82 Identities=32% Similarity=0.705 Sum_probs=68.7
Q ss_pred cccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCcccCCCCCCCCCCCCCCccccceeC
Q 006787 425 TNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSES 504 (631)
Q Consensus 425 ~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~~ 504 (631)
++||..+++.|. +.|.++.++|.|.|++ ||.+ .++ +.|+++ +||. .+..|.+. |+|+
T Consensus 312 ~~~C~~~~~~C~-------~~C~~~~~~y~C~C~~--Gy~l-~~g-~~C~di--deC~-~~~~C~~~---------C~n~ 368 (791)
T 3m0c_C 312 TNECLDNNGGCS-------HVCNDLKIGYECLCPD--GFQL-VAQ-RRCEDI--DECQ-DPDTCSQL---------CVNL 368 (791)
T ss_dssp CCSTTTGGGGCS-------SEEEECSBSEEEECCT--TCEE-ETT-TEEECC--CCCS-SSSSCTTT---------CCBC
T ss_pred cccccccccCcc-------ccccCCCCCcccCCCC--CCcc-CCC-CccccC--cccC-CCCCCCCe---------eecC
Confidence 678887777787 7999999999999999 8887 566 789987 9998 45577654 9999
Q ss_pred C-CceeeCCCCccc--CCCccccCcCcc
Q 006787 505 Q-ITGCHCPKGFRG--DGHKCEDINECK 529 (631)
Q Consensus 505 ~-~~~C~C~~Gy~g--~~~~C~dideC~ 529 (631)
. +|.|.|++||.+ +++.|.+++++.
T Consensus 369 ~gsy~C~C~~Gy~l~~~~~~C~~~~~~p 396 (791)
T 3m0c_C 369 EGGYKCQCEEGFQLDPHTKACKAVGSIA 396 (791)
T ss_dssp SSCBCCCCCSSEECCSSCCCCEETTSCC
T ss_pred CCCceeecCCCCEeCCCCceeeeccccc
Confidence 9 999999999995 457899888764
No 50
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.40 E-value=6e-07 Score=101.30 Aligned_cols=104 Identities=16% Similarity=0.165 Sum_probs=67.5
Q ss_pred CCceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCEEEEEecCccCHHHHHHHHHHcCCcEEEEEeCCCCC-ccc------
Q 006787 68 GGFMVGSVIYPDKGASGCQPFEGDKPFKSKFPRPTVLLLDRGECYFALKVWHGQQAGAAAVLVADSVDEP-LIT------ 140 (631)
Q Consensus 68 ~~~i~g~lv~~~~~~~gC~~~~~~~~~~~~~~~~~i~LV~RG~CsF~~Kv~nAq~aGA~avII~~~~~~~-~~~------ 140 (631)
.+.++|.||++. .|+.. +. ..+. -...|+||||+||.|+|.+|+++|+++||+|||||++..+. ...
T Consensus 105 ~g~v~g~lV~vg---~G~~~-D~-~~l~-vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~ 178 (640)
T 3kas_A 105 AATVTGKLVHAN---FGTKK-DF-EDLY-TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFF 178 (640)
T ss_dssp CEEEEECEEECT---TCCHH-HH-HTCS-SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCC
T ss_pred CCceEEEEEEec---CCChh-hH-HHhh-cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccc
Confidence 457899999852 45421 10 0111 13347799999999999999999999999999999976321 100
Q ss_pred --c-CCCCC-CCCcC-----------CcccccCccEEEEeHHHHHHHHHHHH
Q 006787 141 --M-DSPEE-STDAN-----------GYVEKIGIPSALIDRAFGLSLKEALK 177 (631)
Q Consensus 141 --m-~~~~~-~~~~~-----------~~~~~i~IP~~~I~~~~G~~l~~~l~ 177 (631)
. ..+++ .+.+. .......||++.|+.++|+.|++.+.
T Consensus 179 G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 179 GHAHLGTGDPYTPGFPSFNHTQFPPSRSSGLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp EECCSSSSCSCCCSSCC---CCCCCCSSCCCCSSCEEECCHHHHHHHHTTEE
T ss_pred cccccCCCCCCCCCcccccccccccccccCCCCCCEEecCHHHHHHHHHHcc
Confidence 0 00011 00000 01123479999999999999998775
No 51
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=98.39 E-value=2.5e-07 Score=69.35 Aligned_cols=42 Identities=31% Similarity=0.819 Sum_probs=37.3
Q ss_pred ccCcCccCC---------CCCCCCCCeeeecCCCeEEecCCCCeecCCCCceee
Q 006787 523 EDINECKER---------SACQCDGCSCQNTWGGFECKCKGNLLFIKEQDACIE 567 (631)
Q Consensus 523 ~dideC~~~---------~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C~~ 567 (631)
+|||||... ++|. ++|+|++|+|+|.|++||.+..++.+|.+
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~---~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~~ 52 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ---HLCHNYVGGYFCSCRPGYELQEDRHSCQA 52 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS---SEEEEETTEEEEECSTTCEECTTSSCEEC
T ss_pred CccccccCcccccccccCCCCC---CEeECCCCCeEEECCCCCeECCCCCccCC
Confidence 589999862 5798 79999999999999999999999999974
No 52
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.36 E-value=6e-08 Score=89.24 Aligned_cols=100 Identities=19% Similarity=0.405 Sum_probs=65.9
Q ss_pred cccccccc-cCccccCCCCcccCCccccc---------cccccccCCCcccCCCCCceeeCCCc----------eeeecC
Q 006787 399 TAVLRAIC-AGFKEATEPQICLTGDLETN---------ECLERNGGCWQDTQANITACKDTFRG----------RLCECP 458 (631)
Q Consensus 399 ~~v~~~~C-~Gf~~~~~g~~C~~~~~d~d---------eC~~~~~~C~~~~~~~~~~C~~~~g~----------~~C~C~ 458 (631)
.+.|.+.| +||.+...+..|.+.. .. .|......|. ....|.+..++ |.|.|+
T Consensus 21 ~g~y~C~C~~G~~g~~~~~~C~~~~--~~~C~~~~~g~~C~~~~~~c~-----~~~~C~~~~g~~~g~~C~~c~~~C~C~ 93 (147)
T 2w86_A 21 PGSFICECSSESTLDPTKTICIETI--KGTCWQTVIDGRCEININGAT-----LKSQCCSSLGAAWGSPCTLCQVDPICG 93 (147)
T ss_dssp TTEEEEECCTTEEECTTSSBEEECC--CEEEEEEEETTEEEEEEEEEE-----CHHHHHTTTCSEETTTTEECCCCTTTC
T ss_pred CCCEEeECCCCcccCCCCCeecCCC--CCcccCCCCCCccccCCCccc-----cCCccccCcCcccCCCcccCCCcccCC
Confidence 34678888 9998766666776321 11 2222111222 11234444433 788999
Q ss_pred CCCCeeeeCCCccceeecCCCcccCCCCCCCCCCCCCCccccceeCC-CceeeCCCCcccCC
Q 006787 459 IVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSESQ-ITGCHCPKGFRGDG 519 (631)
Q Consensus 459 ~~~G~~~~gdg~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g~~ 519 (631)
+ ||... ++ +.|+++ |||...++.|.+ ++|+++. +|+|.|++||.+++
T Consensus 94 ~--Gy~~~-~g-~~C~di--deC~~~~~~C~~--------g~C~n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 94 K--GYSRI-KG-TQCEDI--DECEVFPGVCKN--------GLCVNTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp T--TEEEE-ET-TEEEEC--CHHHHSTTCSSS--------SEEEEETTEEEEECCTTCCBCT
T ss_pred C--ccccC-CC-CccCcc--ccccCCCCCCCC--------CEEECCCCCEEeeCCCCCccCC
Confidence 9 77642 45 679987 999987777863 4699999 99999999999763
No 53
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.33 E-value=1.2e-07 Score=83.79 Aligned_cols=86 Identities=23% Similarity=0.526 Sum_probs=63.4
Q ss_pred ccccccc-cCccccCCCCcccCCccccccccc--cccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeec
Q 006787 400 AVLRAIC-AGFKEATEPQICLTGDLETNECLE--RNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAY 476 (631)
Q Consensus 400 ~v~~~~C-~Gf~~~~~g~~C~~~~~d~deC~~--~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i 476 (631)
+.|.+.| +||.+.. + ++++|.. .++.|. +.|.+ .++|+|.|++ ||.+.. + +.|+++
T Consensus 22 g~y~C~C~~Gy~g~~----~-----~~~~C~~~C~~~~C~-------~~C~~-~~~y~C~C~~--Gy~~~~-g-~~C~di 80 (118)
T 1dx5_I 22 TSYLCVCAEGFAPIP----H-----EPHRCQMFCNQTACP-------ADCDP-NTQASCECPE--GYILDD-G-FICTDI 80 (118)
T ss_dssp SCEEEECCTTEEEET----T-----EEEEEEECCCSSEEE-------CEECT-TSTTCEECCT--TEEEET-T-TEEEEC
T ss_pred CCEEeECCCCccccC----C-----CCCccccccCCCCCC-------CcccC-CCCeEeECCC--CccCCC-C-Cccccc
Confidence 4577888 9997632 1 2455543 123365 68988 5899999999 887664 5 679987
Q ss_pred CCCcccCCCCCCCCCCCCCCccccceeCC-CceeeCCCCcccC
Q 006787 477 GPARCSINNGGCWSDTKNGLTFSACSESQ-ITGCHCPKGFRGD 518 (631)
Q Consensus 477 ~~~~C~~~~~~C~~~~~~g~~~~~C~~~~-~~~C~C~~Gy~g~ 518 (631)
|+|... .+|. ++|+++. +|.|.|++||.++
T Consensus 81 --deC~~~-~~C~---------~~C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 81 --DECENG-GFCS---------GVCHNLPGTFECICGPDSALA 111 (118)
T ss_dssp --CHHHHC-SSCS---------SEEEECSSSEEEEECSSSSCE
T ss_pred --cccCCC-CCCc---------CeEEeCCCCEEEECCCCCccC
Confidence 999873 4672 5699999 9999999999865
No 54
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.30 E-value=1.3e-08 Score=101.80 Aligned_cols=102 Identities=13% Similarity=0.054 Sum_probs=71.2
Q ss_pred CCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCc------ccCCC----------------CCC-CCCCCCCCcc
Q 006787 442 NITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPAR------CSINN----------------GGC-WSDTKNGLTF 498 (631)
Q Consensus 442 ~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~------C~~~~----------------~~C-~~~~~~g~~~ 498 (631)
++++|++..++|+|+||+ +|.|.. |+. .+++ |...+ ..| ...|.|+
T Consensus 42 ngG~C~~g~~~y~C~Cp~----Gf~G~~---Ce~-ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ng--- 110 (267)
T 4fbr_A 42 DGGKTLKGTMTYNGEGPI----GFRGTL---SSA-NNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDG--- 110 (267)
T ss_dssp STTSEEEEEEEETTSCCE----EEEEEE---CST-TEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSST---
T ss_pred CCCeecCCCCCeEEeCCC----Cccccc---ccc-cccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCC---
Confidence 789999999999999999 565544 643 2344 21110 001 1125555
Q ss_pred ccceeCC-CceeeCCCCcccCCCccc-cCcCc-----------------------------cCCCCCCCCCCeeeecCCC
Q 006787 499 SACSESQ-ITGCHCPKGFRGDGHKCE-DINEC-----------------------------KERSACQCDGCSCQNTWGG 547 (631)
Q Consensus 499 ~~C~~~~-~~~C~C~~Gy~g~~~~C~-dideC-----------------------------~~~~~C~~~~~~C~nt~Gs 547 (631)
++|++.. +|+|.|++||+|. .|+ ++|+| .. .+|. ++++|++..++
T Consensus 111 G~C~~~~~sy~C~C~~Gf~G~--~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~-~~c~-ngg~C~dg~~~ 186 (267)
T 4fbr_A 111 GKTLTGTTTYNGEGPIGFKSE--VTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVD-AKSN-DGGKTLSGTMT 186 (267)
T ss_dssp TSEEEEEEEETTSCCEEEEEE--ECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEE-EECS-STTSEEEEEEE
T ss_pred CEEecCCccEEeeCCCCcccc--CCCCCcccccccCCcCCccccCCcceecccccccccccCC-CCCC-CCCEeeCCCCC
Confidence 7899888 9999999999975 343 33331 11 2577 88999999999
Q ss_pred eEEecCCCCee
Q 006787 548 FECKCKGNLLF 558 (631)
Q Consensus 548 y~C~C~~G~~~ 558 (631)
|+|.|++||+.
T Consensus 187 y~C~Cp~Gf~G 197 (267)
T 4fbr_A 187 YNGEGPIGFRG 197 (267)
T ss_dssp ETTSCCEEEEE
T ss_pred eEEeCCCCccc
Confidence 99999999964
No 55
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.26 E-value=6.8e-07 Score=70.88 Aligned_cols=48 Identities=31% Similarity=0.676 Sum_probs=43.8
Q ss_pred ccccccccccCCCcccCCCCCceeeCCC-ceeeecCCCCCeeeeCCCccceeecCCCcccC
Q 006787 424 ETNECLERNGGCWQDTQANITACKDTFR-GRLCECPIVKGVQYRGDGYISCQAYGPARCSI 483 (631)
Q Consensus 424 d~deC~~~~~~C~~~~~~~~~~C~~~~g-~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~ 483 (631)
|+|||..++++|. +.|.++.| +|.|.|++ ||.+..|+ ++|.++ ++|.-
T Consensus 4 d~~eC~~~nggC~-------h~C~n~~g~s~~C~C~~--Gy~L~~D~-~tC~d~--dec~C 52 (69)
T 1kli_L 4 DQLICVNENGGCE-------QYCSDHTGTKRSCRCHE--GYSLLADG-VSCTPT--VEYPC 52 (69)
T ss_dssp CCCCTTSGGGGCS-------SEEEEETTTEEEEECCT--TEEECTTS-SCEEEC--SSSCT
T ss_pred ccccccCCCCCcC-------CEeEcCCCCCEEEeCCC--CCeECCCC-CcccCc--ccccC
Confidence 7899999899998 89999999 89999999 99999999 899998 88753
No 56
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.22 E-value=8.9e-07 Score=101.94 Aligned_cols=81 Identities=33% Similarity=0.710 Sum_probs=66.5
Q ss_pred ccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCcccCCCCCCCCCCCCCCcccccee
Q 006787 424 ETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSE 503 (631)
Q Consensus 424 d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~ 503 (631)
+++||..+++.|. +.|.++.++|.|.|++ ||.+ .++ +.|+++ +||.. +..|.+. |+|
T Consensus 293 ~~~eC~~~~~~C~-------~~C~~~~~~~~C~C~~--G~~~-~~~-~~C~di--deC~~-~~~C~~~---------C~n 349 (699)
T 1n7d_A 293 GTNECLDNNGGCS-------HVCNDLKIGYECLCPD--GFQL-VAQ-RRCEDI--DECQD-PDTCSQL---------CVN 349 (699)
T ss_dssp CCCCTTSSTTTSC-------TTCCCCTTCCCCCCCS--SSCC-CSS-SCCCCC--CCCSS-SSSCTTT---------CCB
T ss_pred ccccccccccCcC-------CCcccCCCCcEEeCCC--CeEc-CCC-CcccCc--cccCC-CCccccc---------ccc
Confidence 3789988877887 7899999999999999 8877 566 789987 99974 4567654 999
Q ss_pred CC-CceeeCCCCcccC--CCccccCcC
Q 006787 504 SQ-ITGCHCPKGFRGD--GHKCEDINE 527 (631)
Q Consensus 504 ~~-~~~C~C~~Gy~g~--~~~C~dide 527 (631)
+. +|.|.|++||.++ +++|.++++
T Consensus 350 ~~g~y~C~C~~G~~~~~~~~~C~~~~~ 376 (699)
T 1n7d_A 350 LEGGYKCQCEEGFQLDPHTKACKAVGS 376 (699)
T ss_dssp CSSCBCCCCCSSCBCCSSCCCCBCCSS
T ss_pred CCCCeeeeeecccccCCCCCccccccc
Confidence 99 9999999999964 467876654
No 57
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.21 E-value=9.6e-07 Score=66.81 Aligned_cols=45 Identities=22% Similarity=0.540 Sum_probs=40.7
Q ss_pred ccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCccc
Q 006787 426 NECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARCS 482 (631)
Q Consensus 426 deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~ 482 (631)
|||...+++|. +.|.|++|+|+|.|++ ||.+..|+ ++|+++ ++|.
T Consensus 2 dEC~~~~~~C~-------~~C~nt~Gsy~C~C~~--Gy~L~~d~-~~C~di--dec~ 46 (55)
T 2jkh_L 2 KLCSLDNGDCD-------QFCHEEQNSVVCSCAR--GYTLADNG-KACIPT--GPYP 46 (55)
T ss_dssp CCTTTGGGGCS-------SEEEEETTEEEEECCT--TEEECTTS-SCEEES--SSSC
T ss_pred ccccCCCCCcC-------cEeEcCCCCeEEeCCC--CCEECCCC-CeeccC--cccc
Confidence 68988788898 7999999999999999 99999999 899998 8875
No 58
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.16 E-value=2.4e-06 Score=96.98 Aligned_cols=117 Identities=21% Similarity=0.507 Sum_probs=80.7
Q ss_pred ccc-cCccccCCCCcccCCc-----cccccccccc--cCCCcccCCCCCceeeCCCceeeecC----CCCCeeeeCCCcc
Q 006787 404 AIC-AGFKEATEPQICLTGD-----LETNECLERN--GGCWQDTQANITACKDTFRGRLCECP----IVKGVQYRGDGYI 471 (631)
Q Consensus 404 ~~C-~Gf~~~~~g~~C~~~~-----~d~deC~~~~--~~C~~~~~~~~~~C~~~~g~~~C~C~----~~~G~~~~gdg~~ 471 (631)
+.| +||. |..|+... ...++|...+ ..|. +++.|.+ +.|.|+ + +|.|..
T Consensus 460 C~C~~Gy~----G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs-----~~G~C~~----g~C~C~~~~~~----Gy~G~~-- 520 (690)
T 3fcs_B 460 CRCGPGWL----GSQCECSEEDYRPSQQDECSPREGQPVCS-----QRGECLC----GQCVCHSSDFG----KITGKY-- 520 (690)
T ss_dssp EEECTTCC----SSSSCCSCC------CCCCSSSSSSCGGG-----GSEEECS----SSEEECCCSSC----CCBSTT--
T ss_pred eEeCCCcc----CCceeeccCccCCccCCcCCCCCCCCCCC-----CCCEEEC----CeeEeecCCCC----CeeCCC--
Confidence 567 8884 56776310 0126787543 2377 7789974 689999 7 566665
Q ss_pred ceeecCCCcccCCC-CCCCCCCCCCCccccceeCCCceeeCCCCcccCCCccc---cCcCccCC--CCCCCCCCeeeecC
Q 006787 472 SCQAYGPARCSINN-GGCWSDTKNGLTFSACSESQITGCHCPKGFRGDGHKCE---DINECKER--SACQCDGCSCQNTW 545 (631)
Q Consensus 472 ~C~~i~~~~C~~~~-~~C~~~~~~g~~~~~C~~~~~~~C~C~~Gy~g~~~~C~---dideC~~~--~~C~~~~~~C~nt~ 545 (631)
|+- ..++|.... ..|... +.|.+ +.|.|++||.|. .|+ ++++|... .+|. ++++|.+
T Consensus 521 -Ce~-~~~~C~~~~~~~C~~~-------G~C~~---g~C~C~~Gy~G~--~CeC~~~~~~C~~~~g~~C~-~~G~C~~-- 583 (690)
T 3fcs_B 521 -CEC-DDFSCVRYKGEMCSGH-------GQCSC---GDCLCDSDWTGY--YCNCTTRTDTCMSSNGLLCS-GRGKCEC-- 583 (690)
T ss_dssp -SCB-CSSCCCBSSSSBGGGS-------EEEET---TEEEECTTEESS--SSCEECCCTTTBCTTSSBTS-SSCEEET--
T ss_pred -cCc-ccCcCcCCCCCCCCCC-------CEecC---CeeECcCCCcCC--CCccCCCCCcccCCCCCCCC-CCCEEeC--
Confidence 863 236776421 235433 67765 899999999998 776 78899862 5899 8899976
Q ss_pred CCeEEec-CCCCee
Q 006787 546 GGFECKC-KGNLLF 558 (631)
Q Consensus 546 Gsy~C~C-~~G~~~ 558 (631)
.+|.| ++||.+
T Consensus 584 --g~C~C~~~Gy~G 595 (690)
T 3fcs_B 584 --GSCVCIQPGSYG 595 (690)
T ss_dssp --TEEECCSTTCBS
T ss_pred --CEEECCCCCccC
Confidence 28999 999963
No 59
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.15 E-value=1.5e-06 Score=68.85 Aligned_cols=46 Identities=17% Similarity=0.478 Sum_probs=40.6
Q ss_pred cccCcCccCC-CCCCCCCCeeeecCC-CeEEecCCCCeecCCCCceeeccc
Q 006787 522 CEDINECKER-SACQCDGCSCQNTWG-GFECKCKGNLLFIKEQDACIERNG 570 (631)
Q Consensus 522 C~dideC~~~-~~C~~~~~~C~nt~G-sy~C~C~~G~~~~~d~~~C~~~~~ 570 (631)
..|+|||..+ +.|. +.|+|++| +|+|.|++||.+..|+++|.+...
T Consensus 2 ~~d~~eC~~~nggC~---h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~de 49 (69)
T 1kli_L 2 KDDQLICVNENGGCE---QYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE 49 (69)
T ss_dssp CSCCCCTTSGGGGCS---SEEEEETTTEEEEECCTTEEECTTSSCEEECSS
T ss_pred CcccccccCCCCCcC---CEeEcCCCCCEEEeCCCCCeECCCCCcccCccc
Confidence 4689999874 6898 89999999 899999999999999999988653
No 60
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.15 E-value=1.4e-06 Score=65.91 Aligned_cols=43 Identities=19% Similarity=0.467 Sum_probs=37.2
Q ss_pred CcCccCC-CCCCCCCCeeeecCCCeEEecCCCCeecCCCCceeeccc
Q 006787 525 INECKER-SACQCDGCSCQNTWGGFECKCKGNLLFIKEQDACIERNG 570 (631)
Q Consensus 525 ideC~~~-~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C~~~~~ 570 (631)
.|||... +.|. +.|+|++|+|+|.|++||.+..++.+|.+...
T Consensus 1 ~dEC~~~~~~C~---~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~dide 44 (55)
T 2jkh_L 1 RKLCSLDNGDCD---QFCHEEQNSVVCSCARGYTLADNGKACIPTGP 44 (55)
T ss_dssp -CCTTTGGGGCS---SEEEEETTEEEEECCTTEEECTTSSCEEESSS
T ss_pred CccccCCCCCcC---cEeEcCCCCeEEeCCCCCEECCCCCeeccCcc
Confidence 3789864 6798 79999999999999999999999999987653
No 61
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=98.12 E-value=1.6e-06 Score=90.24 Aligned_cols=105 Identities=33% Similarity=0.834 Sum_probs=47.7
Q ss_pred ccccc-cCccccCCCCcccCCccccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCc
Q 006787 402 LRAIC-AGFKEATEPQICLTGDLETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPAR 480 (631)
Q Consensus 402 ~~~~C-~Gf~~~~~g~~C~~~~~d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~ 480 (631)
+.+.| +||. |..|+ .++|.. .|. +++.|.+ .+.|.|++ +|.|.. |+. +.
T Consensus 165 ~~C~C~~G~~----G~~C~-----~~~C~~---~C~-----~~G~C~~---~~~C~C~~----G~~G~~---C~~---~~ 214 (324)
T 2ygq_A 165 RICECPDGFH----GPHCE-----KALCTP---RCM-----NGGLCVT---PGFCICPP----GFYGVN---CDK---AN 214 (324)
T ss_dssp SCEECCTTEE----SSSSC-----EESSSS---CCC-----TTCEECS---SCCEECCT----TCBTTT---TCB---CC
T ss_pred CeEECCCCCc----CCCCC-----CCCCCC---CCC-----CCCEEcC---CCEEeCCC----CccCCC---ccc---Cc
Confidence 45677 8885 45676 346742 377 6788875 46799988 445554 764 33
Q ss_pred ccCCCCCCCCCCCCCCccccceeCCCceeeCCCCcccCCCccccCcCccCCCCCCCCCCeeeecCCCeEEecCCCCe
Q 006787 481 CSINNGGCWSDTKNGLTFSACSESQITGCHCPKGFRGDGHKCEDINECKERSACQCDGCSCQNTWGGFECKCKGNLL 557 (631)
Q Consensus 481 C~~~~~~C~~~~~~g~~~~~C~~~~~~~C~C~~Gy~g~~~~C~dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~ 557 (631)
|. ..|. ++ ++|.+ .+.|.|++||.|. .|+ +++|. .+|. ++++|.+ .++|.|++||.
T Consensus 215 C~---~~C~----~~---G~C~~--~~~C~C~~G~~G~--~C~-~~~C~--~~C~-~~g~C~~---~~~C~C~~G~~ 270 (324)
T 2ygq_A 215 CS---TTCF----NG---GTCFY--PGKCICPPGLEGE--QCE-ISKCP--QPCR-NGGKCIG---KSKCKCSKGYQ 270 (324)
T ss_dssp CS---SCCC----SS---CCBSC--SSCBCCCTTCCTT--TTC----------------------------------
T ss_pred CC---CCCC----CC---CeeCC--CCeeeCCCCccCC--CCC-cCcCC--CcCC-CCCEECC---CCEEECCCCCc
Confidence 53 1233 22 55654 3677788888766 665 45665 2676 6677763 46777777775
No 62
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=98.04 E-value=1.3e-06 Score=91.02 Aligned_cols=112 Identities=29% Similarity=0.759 Sum_probs=32.1
Q ss_pred ccccc-cCccccCCCCcccCCccccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCc
Q 006787 402 LRAIC-AGFKEATEPQICLTGDLETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPAR 480 (631)
Q Consensus 402 ~~~~C-~Gf~~~~~g~~C~~~~~d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~ 480 (631)
+.+.| +||. |..|. .++|. ..|. +++.|.+. +.|.|++ +|.|+. |+. ++
T Consensus 197 ~~C~C~~G~~----G~~C~-----~~~C~---~~C~-----~~G~C~~~---~~C~C~~----G~~G~~---C~~---~~ 246 (324)
T 2ygq_A 197 GFCICPPGFY----GVNCD-----KANCS---TTCF-----NGGTCFYP---GKCICPP----GLEGEQ---CEI---SK 246 (324)
T ss_dssp CCEECCTTCB----TTTTC-----BCCCS---SCCC-----SSCCBSCS---SCBCCCT----TCCTTT---TC------
T ss_pred CEEeCCCCcc----CCCcc-----cCcCC---CCCC-----CCCeeCCC---CeeeCCC----CccCCC---CCc---Cc
Confidence 45778 8995 56787 34674 2387 77899763 6899999 455554 863 55
Q ss_pred ccCCCCCCCCCCCCCCccccceeCCCceeeCCCCcccCCCccccCcCccCCCCCCCCCCeeeecCCCeEEecCCCCeecC
Q 006787 481 CSINNGGCWSDTKNGLTFSACSESQITGCHCPKGFRGDGHKCEDINECKERSACQCDGCSCQNTWGGFECKCKGNLLFIK 560 (631)
Q Consensus 481 C~~~~~~C~~~~~~g~~~~~C~~~~~~~C~C~~Gy~g~~~~C~dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~ 560 (631)
|. ..|. ++ +.|.. .+.|.|++||.|+ .|+ +++|.. +|. ++++|.+ +++|.|++||.
T Consensus 247 C~---~~C~----~~---g~C~~--~~~C~C~~G~~G~--~C~-~~~C~~--~C~-~~g~C~~---~~~C~C~~G~~--- 302 (324)
T 2ygq_A 247 CP---QPCR----NG---GKCIG--KSKCKCSKGYQGD--LCS-KPVCEP--GCG-AHGTCHE---PNKCQCQEGWH--- 302 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CC---CcCC----CC---CEECC--CCEEECCCCCcCC--CCc-CCCCCC--CCC-CCCEECC---CCEeECCCCCc---
Confidence 64 2343 33 66764 5799999999987 787 567863 788 7899987 58999999995
Q ss_pred CCCceeec
Q 006787 561 EQDACIER 568 (631)
Q Consensus 561 d~~~C~~~ 568 (631)
|..|...
T Consensus 303 -G~~C~~~ 309 (324)
T 2ygq_A 303 -GRHCNKR 309 (324)
T ss_dssp --------
T ss_pred -CCCCCCC
Confidence 5677653
No 63
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.94 E-value=7.3e-06 Score=57.12 Aligned_cols=32 Identities=28% Similarity=0.757 Sum_probs=29.8
Q ss_pred cCcCccCCCCCCCCCCeeeecCCCeEEecCCCCe
Q 006787 524 DINECKERSACQCDGCSCQNTWGGFECKCKGNLL 557 (631)
Q Consensus 524 dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~ 557 (631)
|+|+|..+ ||. ++++|+++.++|+|.|++||.
T Consensus 2 d~d~C~~~-pC~-ngg~C~~~~~~~~C~C~~G~~ 33 (39)
T 1edm_B 2 DGDQCESN-PCL-NGGSCKDDINSYECWCPFGFE 33 (39)
T ss_dssp CCCTTTTC-CCC-TTCEEEEETTEEEEECCTTCC
T ss_pred ccccCCCC-CCC-CCCEeEcCCCceEeECCCCCc
Confidence 78999876 999 899999999999999999995
No 64
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=97.93 E-value=5.4e-06 Score=94.14 Aligned_cols=101 Identities=22% Similarity=0.472 Sum_probs=72.6
Q ss_pred cccccccCCCcccCCCCCceeeCCCcee---eecCCCCCeeeeCCCccceeecCC--------CcccCCC--CCCCCCCC
Q 006787 427 ECLERNGGCWQDTQANITACKDTFRGRL---CECPIVKGVQYRGDGYISCQAYGP--------ARCSINN--GGCWSDTK 493 (631)
Q Consensus 427 eC~~~~~~C~~~~~~~~~~C~~~~g~~~---C~C~~~~G~~~~gdg~~~C~~i~~--------~~C~~~~--~~C~~~~~ 493 (631)
+|...+ |. +.+.|.+..|.|. |.|++ +|.|.. |+-. . ++|...+ ..|...
T Consensus 436 ~C~~~p--c~-----n~~~C~~g~G~~~~G~C~C~~----Gy~G~~---Ce~~-~~~~~~~~~~~C~~~~~~~~Cs~~-- 498 (690)
T 3fcs_B 436 ACQAQA--EP-----NSHRCNNGNGTFECGVCRCGP----GWLGSQ---CECS-EEDYRPSQQDECSPREGQPVCSQR-- 498 (690)
T ss_dssp GGGTTC--CT-----TCTTTTTTSEEEETTEEEECT----TCCSSS---SCCS-CC------CCCCSSSSSSCGGGGS--
T ss_pred CCcCCC--CC-----CCCcccCCCCeEeCCceEeCC----CccCCc---eeec-cCccCCccCCcCCCCCCCCCCCCC--
Confidence 455444 66 7789998888888 99999 556665 7531 2 4455432 123332
Q ss_pred CCCccccceeCCCceeeCC----CCcccCCCccc-cCcCccCC--CCCCCCCCeeeecCCCeEEecCCCCeec
Q 006787 494 NGLTFSACSESQITGCHCP----KGFRGDGHKCE-DINECKER--SACQCDGCSCQNTWGGFECKCKGNLLFI 559 (631)
Q Consensus 494 ~g~~~~~C~~~~~~~C~C~----~Gy~g~~~~C~-dideC~~~--~~C~~~~~~C~nt~Gsy~C~C~~G~~~~ 559 (631)
+.|. .+.|.|+ +||.|. .|+ ++++|... .+|. ++++|.+ +.|.|++||.+.
T Consensus 499 -----G~C~---~g~C~C~~~~~~Gy~G~--~Ce~~~~~C~~~~~~~C~-~~G~C~~----g~C~C~~Gy~G~ 556 (690)
T 3fcs_B 499 -----GECL---CGQCVCHSSDFGKITGK--YCECDDFSCVRYKGEMCS-GHGQCSC----GDCLCDSDWTGY 556 (690)
T ss_dssp -----EEEC---SSSEEECCCSSCCCBST--TSCBCSSCCCBSSSSBGG-GSEEEET----TEEEECTTEESS
T ss_pred -----CEEE---CCeeEeecCCCCCeeCC--CcCcccCcCcCCCCCCCC-CCCEecC----CeeECcCCCcCC
Confidence 6676 3799999 999987 897 78999863 5898 7899987 799999999643
No 65
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=97.92 E-value=1.2e-05 Score=91.12 Aligned_cols=93 Identities=14% Similarity=0.178 Sum_probs=71.0
Q ss_pred EEecCCCCCCCCCCC-CCCCC--CCCCCCCEEEEEecCccCHHHHHHHHHHcCCcEEEEEeCCCCCccccCCCCCCCCcC
Q 006787 75 VIYPDKGASGCQPFE-GDKPF--KSKFPRPTVLLLDRGECYFALKVWHGQQAGAAAVLVADSVDEPLITMDSPEESTDAN 151 (631)
Q Consensus 75 lv~~~~~~~gC~~~~-~~~~~--~~~~~~~~i~LV~RG~CsF~~Kv~nAq~aGA~avII~~~~~~~~~~m~~~~~~~~~~ 151 (631)
|+++. ....|.+.. ....+ + ++|||++||.|+|.+|+.+++++||.++|++|+. +.+.
T Consensus 261 lv~~~-~~~~C~~~~l~~~~vdl~-----GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~-~~~~------------ 321 (649)
T 3i6s_A 261 VIYNK-TLSDCSSEELLSQVENPE-----NTIVICDDNGDFSDQMRIITRARLKAAIFISEDP-GVFR------------ 321 (649)
T ss_dssp EECCT-TTTTCCCHHHHTTSSSGG-----GCEEEECCCSCHHHHHHHHHHHTCSEEEEECCCG-GGGG------------
T ss_pred eEecc-cccccccccccccccccC-----CcEEEEeCCCccHHHHHHHHHhcCceEEEEecCc-cccc------------
Confidence 44433 557898754 22222 4 6799999999999999999999999999999876 2111
Q ss_pred CcccccCccEEEEeHHHHHHHHHHHHcCCEEEEEEEe
Q 006787 152 GYVEKIGIPSALIDRAFGLSLKEALKKGEEVVIKLDW 188 (631)
Q Consensus 152 ~~~~~i~IP~~~I~~~~G~~l~~~l~~g~~V~v~l~~ 188 (631)
.....||+++|+.++|+.|++++.++...+++|.+
T Consensus 322 --~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~ 356 (649)
T 3i6s_A 322 --SATFPNPGVVVNKKEGKQVINYVKNSVTPTATITF 356 (649)
T ss_dssp --CCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEE
T ss_pred --cccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEee
Confidence 11347999999999999999999988766666665
No 66
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.90 E-value=6.8e-06 Score=61.03 Aligned_cols=42 Identities=31% Similarity=0.623 Sum_probs=36.7
Q ss_pred ccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCcc
Q 006787 428 CLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARC 481 (631)
Q Consensus 428 C~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C 481 (631)
|..++++|. +.|+|+.|+|+|.|++ ||.+..|+ ++|+++ +||
T Consensus 1 C~~~ng~C~-------~~C~n~~gs~~C~C~~--Gy~L~~d~-~tC~di--de~ 42 (51)
T 1kig_L 1 CSLDNGGCD-------QFCREERSEVRCSCAH--GYVLGDDS-KSCVST--ERF 42 (51)
T ss_dssp CCTTTTSSS-------SCCCEETTEECCCCCT--TEEECTTS-SCEEEC--SSS
T ss_pred CCCCCCCcC-------CEeEcCCCCeEEeCCC--CcEECCCC-CccccC--Ccc
Confidence 455667798 7899999999999999 99999999 899998 765
No 67
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.89 E-value=6.9e-06 Score=65.49 Aligned_cols=28 Identities=39% Similarity=0.934 Sum_probs=24.6
Q ss_pred ccCcCccCC-CCCCCCCCeeeecCCCeEEe
Q 006787 523 EDINECKER-SACQCDGCSCQNTWGGFECK 551 (631)
Q Consensus 523 ~dideC~~~-~~C~~~~~~C~nt~Gsy~C~ 551 (631)
+|||||... ++|. ++++|+|++|+|+|.
T Consensus 1 ~DidEC~~~~~~C~-~~~~C~Nt~Gsy~C~ 29 (71)
T 2kl7_A 1 SDVNECLTIPEACK-GEMKCINHYGGYLCL 29 (71)
T ss_dssp CCSCCTTCCCCSCT-TEEEEEETTCCEEEE
T ss_pred CccccccCCCCCCC-CCCEeECCCCCeEec
Confidence 489999874 6898 778999999999999
No 68
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.82 E-value=1.5e-05 Score=60.05 Aligned_cols=42 Identities=21% Similarity=0.479 Sum_probs=33.6
Q ss_pred ccc-cCcCccCCCCCCCCCCee-----eecCCCeEEecCCCCeecCCCCceeec
Q 006787 521 KCE-DINECKERSACQCDGCSC-----QNTWGGFECKCKGNLLFIKEQDACIER 568 (631)
Q Consensus 521 ~C~-dideC~~~~~C~~~~~~C-----~nt~Gsy~C~C~~G~~~~~d~~~C~~~ 568 (631)
.|+ ++|||..+ ||. ++++| ++..++|+|.|++||. |..|+..
T Consensus 3 ~c~~~~~eC~s~-pC~-NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE~~ 50 (55)
T 3u7u_G 3 SHLVKCAEKEKT-FCV-NGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQNY 50 (55)
T ss_dssp CCEEECCSTTTT-TSC-TTCEEEEECCC--CCCEEEEECTTEE----STTSCEE
T ss_pred CCcccCCCCcCC-CCC-CCCCcCCCCccCCCCCEeEeCCCCCc----CCCcCcc
Confidence 454 89999987 999 99999 4667899999999995 6778653
No 69
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.82 E-value=8.5e-06 Score=62.73 Aligned_cols=35 Identities=23% Similarity=0.624 Sum_probs=31.9
Q ss_pred ccccCcCccCCCCCCCCC--CeeeecCCCeEEecCCCCe
Q 006787 521 KCEDINECKERSACQCDG--CSCQNTWGGFECKCKGNLL 557 (631)
Q Consensus 521 ~C~dideC~~~~~C~~~~--~~C~nt~Gsy~C~C~~G~~ 557 (631)
.|+++|||..+ ||. ++ ++|+|+.++|.|.|++||.
T Consensus 7 ~~~~~d~C~sn-PC~-nga~gtC~~~~g~y~C~C~~Gy~ 43 (61)
T 2k2s_B 7 LSETPAACSSN-PCG-PEAAGTCKETNSGYICRCNQGYR 43 (61)
T ss_dssp CTTSCCHHHHC-SSC-SSSCCEEEECSSEEEEECCTTEE
T ss_pred hcCCCCcCcCC-CCc-CCCccccccCCCceEeECCCCCc
Confidence 47789999876 999 88 7999999999999999997
No 70
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=97.81 E-value=1.5e-05 Score=59.71 Aligned_cols=43 Identities=35% Similarity=0.786 Sum_probs=37.9
Q ss_pred ccccccCCCcccCCCCCceeeCCC-ceeeecCCCCCeeeeCCCccceeecCCCccc
Q 006787 428 CLERNGGCWQDTQANITACKDTFR-GRLCECPIVKGVQYRGDGYISCQAYGPARCS 482 (631)
Q Consensus 428 C~~~~~~C~~~~~~~~~~C~~~~g-~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~ 482 (631)
|..++++|. +.|.|+.+ +|+|.|++ ||.+..|+ ++|+++ +||.
T Consensus 2 C~~~nggC~-------~~C~n~~ggs~~C~C~~--Gy~L~~Dg-~tC~d~--dec~ 45 (53)
T 2bz6_L 2 CVNENGGCE-------QYCSDHTGTKRSCRCHE--GYSLLADG-VSCTPT--VEYP 45 (53)
T ss_dssp TTSGGGGCS-------SEEEEETTTEEEEECCT--TEEECTTS-SCEEEC--SSSC
T ss_pred CcCCCCCcC-------CEeEcCCCCCEEeeCCC--CCEECCCC-CcccCC--cccc
Confidence 666677898 78999999 79999999 99999999 899998 8874
No 71
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.73 E-value=2.4e-05 Score=58.37 Aligned_cols=42 Identities=33% Similarity=0.746 Sum_probs=35.6
Q ss_pred cccccccc--------ccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceee
Q 006787 424 ETNECLER--------NGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQA 475 (631)
Q Consensus 424 d~deC~~~--------~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~ 475 (631)
|+|||... ++.|. +.|.|+.|+|.|.|++ ||.+..++ ++|.+
T Consensus 3 DidEC~~~~~~~~~~~~~~C~-------~~C~n~~Gsy~C~C~~--Gy~~~~d~-~~C~~ 52 (53)
T 1apq_A 3 DLDECASRSKSGEEDPQPQCQ-------HLCHNYVGGYFCSCRP--GYELQEDR-HSCQA 52 (53)
T ss_dssp SCCTTTCSTTTCCCSSSCTTS-------SEEEEETTEEEEECST--TCEECTTS-SCEEC
T ss_pred ccccccCcccccccccCCCCC-------CEeECCCCCeEEECCC--CCeECCCC-CccCC
Confidence 68999864 35687 6999999999999999 99988888 77864
No 72
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=97.71 E-value=5.5e-05 Score=81.45 Aligned_cols=123 Identities=25% Similarity=0.577 Sum_probs=73.2
Q ss_pred cccccc-cCccccCCCCcccCCccccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCC
Q 006787 401 VLRAIC-AGFKEATEPQICLTGDLETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPA 479 (631)
Q Consensus 401 v~~~~C-~Gf~~~~~g~~C~~~~~d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~ 479 (631)
...+.| .||. +..|.. .|. .|. +++.|.+ +.+.|.|++ +|.|+. |+.. -+
T Consensus 184 ~~~c~C~~g~~----G~~C~~------~C~----~C~-----~~G~C~~--~~g~C~C~~----G~~G~~---Ce~~-C~ 234 (423)
T 2gy5_A 184 LIVRRCEAQKW----GPECNH------LCT----ACM-----NNGVCHE--DTGECICPP----GFMGRT---CEKA-CE 234 (423)
T ss_dssp EEECSSCTTEE----STTSCE------ECC----CCC-----TTCEECT--TTCCEECCT----TEESTT---SCEE-CC
T ss_pred ccCCcCCCCCC----CCCCCC------CCC----CCC-----CCCEEEC--CCCcEeCCC----CccCCC---cccc-cC
Confidence 344567 7884 455762 452 377 7789976 567999999 556665 8742 01
Q ss_pred ------cccCCCCCCCCCCCCCCccccceeCCCceeeCCCCcccCCCcccc-------CcCccCCCCCCCCCCeeeecCC
Q 006787 480 ------RCSINNGGCWSDTKNGLTFSACSESQITGCHCPKGFRGDGHKCED-------INECKERSACQCDGCSCQNTWG 546 (631)
Q Consensus 480 ------~C~~~~~~C~~~~~~g~~~~~C~~~~~~~C~C~~Gy~g~~~~C~d-------ideC~~~~~C~~~~~~C~nt~G 546 (631)
.|.. .-.+...|.++ +.|. ..+|.|.|++||.|. .|+. -+.|...-+|. ++++|.+..+
T Consensus 235 ~g~~g~~C~~-~C~~~~~C~~~---g~C~-~~~~~C~C~~G~~G~--~C~~~C~~G~~G~~C~~~C~C~-ngg~C~~~~~ 306 (423)
T 2gy5_A 235 LHTFGRTCKE-RCSGQEGCKSY---VFCL-PDPYGCSCATGWKGL--QCNEACHPGFYGPDCKLRCSCN-NGEMCDRFQG 306 (423)
T ss_dssp TTEESTTSCE-ECCSTTTTTTC---CEEE-TTTTEEECCBTCBSG--GGCBCCCTTBCSBTTCCBCCCT-TCCEEETTTE
T ss_pred CCCCCCCcCc-cCCCCCCCCCC---CEEC-CCCCeEEeCCCcccc--cccCccCCCCcCCcccccccCC-CCCEecCCCc
Confidence 1211 00011122222 4563 128999999999986 6764 12333211566 6789988754
Q ss_pred CeEEecCCCCeecCCCCceee
Q 006787 547 GFECKCKGNLLFIKEQDACIE 567 (631)
Q Consensus 547 sy~C~C~~G~~~~~d~~~C~~ 567 (631)
|.|++||. |..|..
T Consensus 307 ---C~C~~G~~----G~~Ce~ 320 (423)
T 2gy5_A 307 ---CLCSPGWQ----GLQCER 320 (423)
T ss_dssp ---EECCTTCB----STTSCB
T ss_pred ---eECCCCCc----CCCCcc
Confidence 99999996 445543
No 73
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.71 E-value=1.6e-05 Score=58.97 Aligned_cols=36 Identities=14% Similarity=0.565 Sum_probs=32.4
Q ss_pred CCCCCCCCeeeecCCCeEEecCCCCeecCCCCceeeccc
Q 006787 532 SACQCDGCSCQNTWGGFECKCKGNLLFIKEQDACIERNG 570 (631)
Q Consensus 532 ~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C~~~~~ 570 (631)
+.|. +.|+|++|+|+|.|++||.+..|+++|.+...
T Consensus 6 g~C~---~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide 41 (51)
T 1kig_L 6 GGCD---QFCREERSEVRCSCAHGYVLGDDSKSCVSTER 41 (51)
T ss_dssp TSSS---SCCCEETTEECCCCCTTEEECTTSSCEEECSS
T ss_pred CCcC---CEeEcCCCCeEEeCCCCcEECCCCCccccCCc
Confidence 5788 78999999999999999999999999987643
No 74
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=97.69 E-value=5e-05 Score=58.10 Aligned_cols=39 Identities=28% Similarity=0.656 Sum_probs=34.9
Q ss_pred ccccccCCCcccCCCCCceeeCC-CceeeecCCCCCeeeeCCCccceeec
Q 006787 428 CLERNGGCWQDTQANITACKDTF-RGRLCECPIVKGVQYRGDGYISCQAY 476 (631)
Q Consensus 428 C~~~~~~C~~~~~~~~~~C~~~~-g~~~C~C~~~~G~~~~gdg~~~C~~i 476 (631)
|..++++|. +.|.+++ |+|.|.|++ ||.+..|+ ++|.++
T Consensus 2 C~~~nggC~-------~~C~n~~~gs~~C~C~~--Gy~L~~D~-~tC~d~ 41 (59)
T 2wph_E 2 CNIKNGRCE-------QFCKNSADNKVVCSCTE--GYRLAENQ-KSCEPA 41 (59)
T ss_dssp TTTGGGGCS-------SEEEECSTTCEEEECCT--TEEECTTS-SCEEES
T ss_pred CcCCCCCcC-------CEeEeCCCCCEEeeCCC--CcEECCCC-CcccCC
Confidence 566777898 8999999 699999999 99999999 899987
No 75
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=97.61 E-value=1.3e-05 Score=80.49 Aligned_cols=43 Identities=21% Similarity=0.583 Sum_probs=33.9
Q ss_pred ccCcCccCC-CCCCCCCCeeeecCCCeEEecCCCCeecCCCCceeec
Q 006787 523 EDINECKER-SACQCDGCSCQNTWGGFECKCKGNLLFIKEQDACIER 568 (631)
Q Consensus 523 ~dideC~~~-~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C~~~ 568 (631)
+|+|||..+ ++|+ .++.|+|+.|+|.|.|++||. ++|..|.+.
T Consensus 3 ~DiDEC~~~~~~C~-~~a~C~Nt~Gsy~C~C~~Gy~--GnG~~C~d~ 46 (285)
T 1gl4_A 3 LAQQTCANNRHQCS-VHAECRDYATGFCCRCVANYT--GNGRQCVAE 46 (285)
T ss_dssp ----CHHHHGGGSC-TTEEEEECSSCEEEEECTTEE--ECSSSEEET
T ss_pred ccchhccCCCCCCC-CCCEeEcCCCCeEEEcCCCCC--CCCCcCCCC
Confidence 589999864 6899 789999999999999999995 567789764
No 76
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=97.55 E-value=0.0002 Score=84.61 Aligned_cols=64 Identities=34% Similarity=0.563 Sum_probs=52.1
Q ss_pred CCCEEEEEecCccCHHHHHHHHHHcCCcEEEEEeCCCCCc-cccCCCCCCCCcCCcccccCccEEEEeHHHHHHHHH
Q 006787 99 PRPTVLLLDRGECYFALKVWHGQQAGAAAVLVADSVDEPL-ITMDSPEESTDANGYVEKIGIPSALIDRAFGLSLKE 174 (631)
Q Consensus 99 ~~~~i~LV~RG~CsF~~Kv~nAq~aGA~avII~~~~~~~~-~~m~~~~~~~~~~~~~~~i~IP~~~I~~~~G~~l~~ 174 (631)
..++|||++||.|+|.+|+.+|+++||.++||+|+..... +.+ + ....||+++|++.+|+.|+.
T Consensus 279 v~Gkivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~--~----------~~~~iP~~~i~~~~g~~l~~ 343 (926)
T 1xf1_A 279 VKGKIALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIEL--P----------NVDQMPAAFISRKDGLLLKD 343 (926)
T ss_dssp CTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEEC--C----------CSTTCCEEEECHHHHHHHHH
T ss_pred cCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEEecCCCCccccc--C----------ccccccEEEEeHHHHHHHHh
Confidence 3477999999999999999999999999999998864322 221 1 13479999999999998874
No 77
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=97.53 E-value=0.00018 Score=78.06 Aligned_cols=76 Identities=25% Similarity=0.269 Sum_probs=58.1
Q ss_pred CCCCEEEEEecCcc-----CHHHHHHHHHHcCCcEEEEEeCCCCCc----cccCCCCCCCCcCCcccccCccEEEEeHHH
Q 006787 98 FPRPTVLLLDRGEC-----YFALKVWHGQQAGAAAVLVADSVDEPL----ITMDSPEESTDANGYVEKIGIPSALIDRAF 168 (631)
Q Consensus 98 ~~~~~i~LV~RG~C-----sF~~Kv~nAq~aGA~avII~~~~~~~~----~~m~~~~~~~~~~~~~~~i~IP~~~I~~~~ 168 (631)
...++|+|++||.| +|.+|+.+|+++||+++||+++...+- ..+. ......||+++|++++
T Consensus 271 ~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~----------~~~~~~~p~~~v~~~~ 340 (441)
T 1y9z_A 271 NMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVD----------ANSDITVPSVSVDRAT 340 (441)
T ss_dssp CCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEEC----------TTCCCCSCEEEECHHH
T ss_pred CccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccc----------cccCccccEEEEeHHH
Confidence 33488999999987 899999999999999999999863211 1111 1124589999999999
Q ss_pred HHHHHHHHHcCCEEEEE
Q 006787 169 GLSLKEALKKGEEVVIK 185 (631)
Q Consensus 169 G~~l~~~l~~g~~V~v~ 185 (631)
|+.|++++. ..+++.
T Consensus 341 g~~l~~~~~--~~~t~~ 355 (441)
T 1y9z_A 341 GLALKAKLG--QSTTVS 355 (441)
T ss_dssp HHHHHTTTT--SEEEEE
T ss_pred HHHHHHHhc--CCcccc
Confidence 999999874 445543
No 78
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=97.51 E-value=6.7e-05 Score=56.07 Aligned_cols=40 Identities=18% Similarity=0.574 Sum_probs=34.0
Q ss_pred ccCC-CCCCCCCCeeeecCC-CeEEecCCCCeecCCCCceeeccc
Q 006787 528 CKER-SACQCDGCSCQNTWG-GFECKCKGNLLFIKEQDACIERNG 570 (631)
Q Consensus 528 C~~~-~~C~~~~~~C~nt~G-sy~C~C~~G~~~~~d~~~C~~~~~ 570 (631)
|..+ +.|. +.|+|+.| +|+|.|++||.+..|+++|.+...
T Consensus 2 C~~~nggC~---~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~de 43 (53)
T 2bz6_L 2 CVNENGGCE---QYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE 43 (53)
T ss_dssp TTSGGGGCS---SEEEEETTTEEEEECCTTEEECTTSSCEEECSS
T ss_pred CcCCCCCcC---CEeEcCCCCCEEeeCCCCCEECCCCCcccCCcc
Confidence 5442 5788 89999999 799999999999999999997653
No 79
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=97.47 E-value=5.7e-05 Score=85.62 Aligned_cols=88 Identities=23% Similarity=0.587 Sum_probs=62.2
Q ss_pred CCCceeeCCCceeeecC------CCCCeeeeCCCccceeecCCCcccCCC-CCCCC--CCCCCCccccceeCCCceeeCC
Q 006787 442 NITACKDTFRGRLCECP------IVKGVQYRGDGYISCQAYGPARCSINN-GGCWS--DTKNGLTFSACSESQITGCHCP 512 (631)
Q Consensus 442 ~~~~C~~~~g~~~C~C~------~~~G~~~~gdg~~~C~~i~~~~C~~~~-~~C~~--~~~~g~~~~~C~~~~~~~C~C~ 512 (631)
+++.|.+ ..|.|+ + +|.|.. |+-. .+.|...+ ..|.. . +.|.. ..|.|.
T Consensus 486 ~~G~C~~----G~C~C~~~~~~~~----G~~G~~---Ce~~-~~~C~~~~~~~C~~~~~-------G~C~~---g~C~C~ 543 (687)
T 3k6s_B 486 GLGDCVC----GQCLCHTSDVPGK----LIYGQY---CECD-TINCERYNGQVCGGPGR-------GLCFC---GKCRCH 543 (687)
T ss_dssp SSEEEET----TEEEECCCCSTTC----CEESTT---SCEE-SSCSCEETTEETSHHHH-------EEEET---TEEEEC
T ss_pred CCCEEeC----CEEEcCCCCCCCC----Cccccc---cccc-cccccCCCCcCcCCCCC-------CeEEC---CEEEcC
Confidence 7789984 289999 7 666665 7621 25675421 23433 2 56764 489999
Q ss_pred CCcccCCCccc---cCcCccCC--CCCCCCCCeeeecCCCeEEecCCCCee
Q 006787 513 KGFRGDGHKCE---DINECKER--SACQCDGCSCQNTWGGFECKCKGNLLF 558 (631)
Q Consensus 513 ~Gy~g~~~~C~---dideC~~~--~~C~~~~~~C~nt~Gsy~C~C~~G~~~ 558 (631)
+||.|. .|+ ++++|... .+|. ++++|.+ .+|.|++||.+
T Consensus 544 ~G~~G~--~Cec~~~~~~C~~~~g~~Cs-~~G~C~~----g~C~C~~Gy~G 587 (687)
T 3k6s_B 544 PGFEGS--ACQCERTTEGCLNPRRVECS-GRGRCRC----NVCECHSGYQL 587 (687)
T ss_dssp TTCCST--TSCSCCSSCTTBCTTCSBTS-SSCCBCS----SCBCCSTTCCT
T ss_pred CCCcCC--CCccCCCCCCCCCCCCCCCC-CCCcCCC----CEEECCCCCcC
Confidence 999987 776 46889763 4798 7899987 47999999964
No 80
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=97.42 E-value=7e-05 Score=70.22 Aligned_cols=52 Identities=33% Similarity=0.829 Sum_probs=43.2
Q ss_pred CCcccCCCccccCcCccCC-CC---CCCCCCeeeecCCCeEEecCCCCeecCCCCceeec
Q 006787 513 KGFRGDGHKCEDINECKER-SA---CQCDGCSCQNTWGGFECKCKGNLLFIKEQDACIER 568 (631)
Q Consensus 513 ~Gy~g~~~~C~dideC~~~-~~---C~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C~~~ 568 (631)
+||.+. ..|.|+|||... +. |. +.|.|+.|+|+|.|++||.+..++.+|.+.
T Consensus 113 ~Gf~~~-~~~~di~eC~~~~~~~~~C~---~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~ 168 (170)
T 1szb_A 113 TGFEAF-YAAEDIDECQVAPGEAPTCD---HHCHNHLGGFYCSCRAGYVLHRNKRTCSEQ 168 (170)
T ss_dssp CEEEEE-EEEEECCTTCCCTTSCCSSS---SEEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred cCceee-eeccccCcccCCCCCCCccC---CccccCCCCEEEeCCCCcEECCCCCccccc
Confidence 566653 357799999875 22 88 689999999999999999999999999864
No 81
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=97.41 E-value=0.00011 Score=56.28 Aligned_cols=39 Identities=21% Similarity=0.544 Sum_probs=33.2
Q ss_pred ccC-CCCCCCCCCeeeecC-CCeEEecCCCCeecCCCCceeecc
Q 006787 528 CKE-RSACQCDGCSCQNTW-GGFECKCKGNLLFIKEQDACIERN 569 (631)
Q Consensus 528 C~~-~~~C~~~~~~C~nt~-Gsy~C~C~~G~~~~~d~~~C~~~~ 569 (631)
|.. ++.|. +.|+|++ |+|.|.|++||.+..|+++|.+..
T Consensus 2 C~~~nggC~---~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~ 42 (59)
T 2wph_E 2 CNIKNGRCE---QFCKNSADNKVVCSCTEGYRLAENQKSCEPAV 42 (59)
T ss_dssp TTTGGGGCS---SEEEECSTTCEEEECCTTEEECTTSSCEEESS
T ss_pred CcCCCCCcC---CEeEeCCCCCEEeeCCCCcEECCCCCcccCCC
Confidence 444 25788 8999999 699999999999999999998753
No 82
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.40 E-value=0.00012 Score=54.74 Aligned_cols=39 Identities=21% Similarity=0.591 Sum_probs=33.2
Q ss_pred cCcCccCC--CCCCCCCCeee--ecCCCeEEecCCCCeecCCCCceee
Q 006787 524 DINECKER--SACQCDGCSCQ--NTWGGFECKCKGNLLFIKEQDACIE 567 (631)
Q Consensus 524 dideC~~~--~~C~~~~~~C~--nt~Gsy~C~C~~G~~~~~d~~~C~~ 567 (631)
|||||..+ +||. ++++|+ +..++|.|.|++||+ |..|..
T Consensus 2 ~i~~C~~~~~~pC~-ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~ 44 (53)
T 1egf_A 2 SYPGCPSSYDGYCL-NGGVCMHIESLDSYTCNCVIGYS----GDRCQT 44 (53)
T ss_dssp EECCCCTTSSCSSC-SSCEEEEESSSSCEEEECCTTCC----SSSSCC
T ss_pred CcccCCCCCCCcCC-CCcEEEeeCCCCCEEEECCCCCc----CCcCCc
Confidence 68999874 6999 899999 889999999999995 566754
No 83
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=97.35 E-value=9.7e-05 Score=69.27 Aligned_cols=79 Identities=25% Similarity=0.733 Sum_probs=56.5
Q ss_pred ccccc-cCccccCCCCcccCCccccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCcccee-ecCCC
Q 006787 402 LRAIC-AGFKEATEPQICLTGDLETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQ-AYGPA 479 (631)
Q Consensus 402 ~~~~C-~Gf~~~~~g~~C~~~~~d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~-~i~~~ 479 (631)
+.+.| +||. +..|. +|...+ .|. + +.|. ++|+|.|++ | |.|+. |+ ++ +
T Consensus 83 ~~C~C~~G~~----G~~C~-------~C~~~~-~C~-----~-g~C~---~~~~C~C~~--G--~~G~~---C~~~~--~ 132 (169)
T 2vj2_A 83 GDCRCQYGWQ----GLYCD-------KCIPHP-GCV-----H-GICN---EPWQCLCET--N--WGGQL---CDKDL--N 132 (169)
T ss_dssp TCCEECTTEE----SSSSC-------EECCCT-TCS-----S-EECS---STTCCEECT--T--EETTT---TCEES--C
T ss_pred CeeECCCCCC----CCCcc-------cCCCCC-CCC-----C-CCcC---CCCEEeCCC--C--CCCCc---ccCCC--C
Confidence 56677 8885 45675 465433 365 3 4786 579999999 5 55554 97 55 8
Q ss_pred cccCCCCCCCCCCCCCCccccceeC-C-CceeeCCCCcccC
Q 006787 480 RCSINNGGCWSDTKNGLTFSACSES-Q-ITGCHCPKGFRGD 518 (631)
Q Consensus 480 ~C~~~~~~C~~~~~~g~~~~~C~~~-~-~~~C~C~~Gy~g~ 518 (631)
+|.. ...|... ++|+++ . +|.|.|++||.|+
T Consensus 133 ~C~~-~~~C~~~-------g~C~~~~~~~~~C~C~~G~~G~ 165 (169)
T 2vj2_A 133 YCGT-HQPCLNG-------GTCSNTGPDKYQCSCPEGYSGP 165 (169)
T ss_dssp HHHH-TCCCCTT-------CEEEECSTTCEEEECCTTCCST
T ss_pred CCCC-CCCCCCC-------CEEcCCCCCCcEeECCCCCcCc
Confidence 8875 2356554 789997 5 8999999999986
No 84
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=97.24 E-value=4.3e-05 Score=76.77 Aligned_cols=46 Identities=26% Similarity=0.580 Sum_probs=36.8
Q ss_pred ccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCcc
Q 006787 424 ETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARC 481 (631)
Q Consensus 424 d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C 481 (631)
|+|||..+.+.|. .++.|.|+.|+|.|.|++ +|.||| ..|.++ |+.
T Consensus 4 DiDEC~~~~~~C~-----~~a~C~Nt~Gsy~C~C~~----Gy~GnG-~~C~d~--d~P 49 (285)
T 1gl4_A 4 AQQTCANNRHQCS-----VHAECRDYATGFCCRCVA----NYTGNG-RQCVAE--GSP 49 (285)
T ss_dssp ---CHHHHGGGSC-----TTEEEEECSSCEEEEECT----TEEECS-SSEEET--TCE
T ss_pred cchhccCCCCCCC-----CCCEeEcCCCCeEEEcCC----CCCCCC-CcCCCC--CCC
Confidence 7999998878898 668999999999999999 556888 789987 543
No 85
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.24 E-value=0.00015 Score=50.35 Aligned_cols=29 Identities=31% Similarity=0.778 Sum_probs=26.1
Q ss_pred ccccccccccCCCcccCCCCCceeeCCCceeeecCC
Q 006787 424 ETNECLERNGGCWQDTQANITACKDTFRGRLCECPI 459 (631)
Q Consensus 424 d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~ 459 (631)
|+|+|..++ |. ++++|+++.++|+|.|++
T Consensus 2 d~d~C~~~p--C~-----ngg~C~~~~~~~~C~C~~ 30 (39)
T 1edm_B 2 DGDQCESNP--CL-----NGGSCKDDINSYECWCPF 30 (39)
T ss_dssp CCCTTTTCC--CC-----TTCEEEEETTEEEEECCT
T ss_pred ccccCCCCC--CC-----CCCEeEcCCCceEeECCC
Confidence 688998766 98 789999999999999999
No 86
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.21 E-value=0.00025 Score=56.31 Aligned_cols=40 Identities=28% Similarity=0.469 Sum_probs=30.1
Q ss_pred ccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCC
Q 006787 424 ETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDG 469 (631)
Q Consensus 424 d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg 469 (631)
|+|||...++.|. +++.|+|+.|+|+|.|.. .||....++
T Consensus 2 DidEC~~~~~~C~-----~~~~C~Nt~Gsy~C~~~~-~g~~~~~~~ 41 (71)
T 2kl7_A 2 DVNECLTIPEACK-----GEMKCINHYGGYLCLPRS-AAVINDLHG 41 (71)
T ss_dssp CSCCTTCCCCSCT-----TEEEEEETTCCEEEEETT-SCCCSCCSC
T ss_pred ccccccCCCCCCC-----CCCEeECCCCCeEecccC-CcccccccC
Confidence 6899998777798 668999999999998543 155544444
No 87
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.15 E-value=0.00021 Score=53.71 Aligned_cols=43 Identities=30% Similarity=0.570 Sum_probs=32.3
Q ss_pred CcccCCccccccccccccCCCcccCCCCCce-----eeCCCceeeecCCCCCeeeeCCCccceee
Q 006787 416 QICLTGDLETNECLERNGGCWQDTQANITAC-----KDTFRGRLCECPIVKGVQYRGDGYISCQA 475 (631)
Q Consensus 416 ~~C~~~~~d~deC~~~~~~C~~~~~~~~~~C-----~~~~g~~~C~C~~~~G~~~~gdg~~~C~~ 475 (631)
..|. +++|||.+++ |. |+++| ++..++|+|.|++ +|.|.. |+.
T Consensus 2 ~~c~---~~~~eC~s~p--C~-----NgGtC~~~~~~d~~~~y~C~C~~----g~~G~~---CE~ 49 (55)
T 3u7u_G 2 TSHL---VKCAEKEKTF--CV-----NGGECFMVKDLSNPSRYLCKCPN----EFTGDR---CQN 49 (55)
T ss_dssp -CCE---EECCSTTTTT--SC-----TTCEEEEECCC--CCCEEEEECT----TEESTT---SCE
T ss_pred CCCc---ccCCCCcCCC--CC-----CCCCcCCCCccCCCCCEeEeCCC----CCcCCC---cCc
Confidence 3455 3789999887 99 89999 4678899999999 566665 875
No 88
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=97.08 E-value=0.00093 Score=56.17 Aligned_cols=69 Identities=26% Similarity=0.478 Sum_probs=56.7
Q ss_pred ccceeCC--CceeeCCCCcccCCCccccCcC-ccCC-CCCCCCCCeeeecC-CCeEEecCCCCee-cCCCCceeec
Q 006787 499 SACSESQ--ITGCHCPKGFRGDGHKCEDINE-CKER-SACQCDGCSCQNTW-GGFECKCKGNLLF-IKEQDACIER 568 (631)
Q Consensus 499 ~~C~~~~--~~~C~C~~Gy~g~~~~C~dide-C~~~-~~C~~~~~~C~nt~-Gsy~C~C~~G~~~-~~d~~~C~~~ 568 (631)
+.|.... ...|+|..||.+++..|..++. |..+ +.|. +++.|..+. ..-.|.|..+|.. ..+|.-|...
T Consensus 22 A~C~r~~~G~e~CrCl~gY~~dg~~Cv~~Np~C~~nNGGCd-~nAeC~~~~~~ki~C~C~~~~~~~~~~GvfC~~s 96 (105)
T 1n1i_A 22 AACYRYLDGTEEWRCLLGFKEVGGKCVPASITCEENNGGCA-PEAECTMDDKKEVECKCTKEGSEPLFEGVFCSSS 96 (105)
T ss_dssp EEEEECTTSCEEEEECTTEEECSSSEEECCCCTTSGGGGSC-TTSEEEECTTSCEEEECCSTTCCEEGGGTEECCC
T ss_pred CCeEECCCCCEeEEEECCeeccCCEEEECCcchhhcCCCcC-CCcEeEECCCCEEEeECCCCCCccccceEEECCC
Confidence 7798855 7789999999999999998898 8774 7899 999999885 7889999999742 3566777653
No 89
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.91 E-value=0.00035 Score=73.15 Aligned_cols=42 Identities=29% Similarity=0.732 Sum_probs=28.6
Q ss_pred CcCccCCCCCCCCCCeeeecCCCeEEecCCCCeecCCCCceeecc
Q 006787 525 INECKERSACQCDGCSCQNTWGGFECKCKGNLLFIKEQDACIERN 569 (631)
Q Consensus 525 ideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C~~~~ 569 (631)
||||..++.|. +.|.|++|+|+|.|++||.+..++.+|....
T Consensus 1 i~ec~~~~~C~---~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~ 42 (349)
T 3v64_C 1 VNECAEEGYCS---QGCTNSEGAFQCWCEAGYELRPDRRSCKALG 42 (349)
T ss_dssp --------CCS---SEECCC---CCEECCTTEEECTTSSCEEESS
T ss_pred CcccCCCCCCc---CeeecCCCCeEEECCCCccCCCCCCcccccc
Confidence 68998556899 8999999999999999999999999998743
No 90
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=96.90 E-value=0.00074 Score=56.44 Aligned_cols=58 Identities=22% Similarity=0.612 Sum_probs=49.8
Q ss_pred ccceeCC--CceeeCCCCcccCCCccccC--cCccCC-CCCCCCCCeeeecC-----CCeEEecCCCCe
Q 006787 499 SACSESQ--ITGCHCPKGFRGDGHKCEDI--NECKER-SACQCDGCSCQNTW-----GGFECKCKGNLL 557 (631)
Q Consensus 499 ~~C~~~~--~~~C~C~~Gy~g~~~~C~di--deC~~~-~~C~~~~~~C~nt~-----Gsy~C~C~~G~~ 557 (631)
+.|.+.. ...|+|.+||.+++..|..+ +.|..+ +.|. +++.|..+. +...|.|.+||.
T Consensus 16 A~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd-~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 16 SGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCD-ADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp EEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCC-TTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred CCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcC-CCceeEecCCcccCCceEeEeCCCCc
Confidence 7788765 88999999999999999977 589885 7899 999998775 679999999974
No 91
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.89 E-value=0.00066 Score=62.58 Aligned_cols=51 Identities=29% Similarity=0.647 Sum_probs=41.1
Q ss_pred CCcccCCCccccCcCccCC--CCCCCCCCeeeecCCCeEEecCCCCeecCCCCceee
Q 006787 513 KGFRGDGHKCEDINECKER--SACQCDGCSCQNTWGGFECKCKGNLLFIKEQDACIE 567 (631)
Q Consensus 513 ~Gy~g~~~~C~dideC~~~--~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C~~ 567 (631)
.||... ..+.|+|||... .+|. +.|.|+.|+|+|.|++||.+..++.+|..
T Consensus 106 ~GF~~~-y~~~d~~eC~~~~~~~C~---~~C~n~~g~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 106 TGFAAY-YVATDINECTDFVDVPCS---HFCNNFIGGYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp CEEEEE-EEEEECCTTTC-CCCCSS---SEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred ccceee-eecccCcccCCCCCCCCC---CcccCcCCCEEEecCCCcEECCCCCcccc
Confidence 355432 246799999873 4687 79999999999999999999999999974
No 92
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=96.86 E-value=0.00086 Score=72.10 Aligned_cols=80 Identities=28% Similarity=0.692 Sum_probs=54.2
Q ss_pred CceeeecCCCCCeeeeCCCccceeecCCCcccCCCCCCCCCCCCCCccccceeCCCceeeCCCCcccCCCcccc-C----
Q 006787 451 RGRLCECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSESQITGCHCPKGFRGDGHKCED-I---- 525 (631)
Q Consensus 451 g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~~~~~~C~C~~Gy~g~~~~C~d-i---- 525 (631)
+.+.|.|++ +|.|+. |+.. |. .|.. + ++|.+ ..+.|.|++||.|. .|+. .
T Consensus 183 ~~~~c~C~~----g~~G~~---C~~~----C~----~C~~----~---G~C~~-~~g~C~C~~G~~G~--~Ce~~C~~g~ 237 (423)
T 2gy5_A 183 RLIVRRCEA----QKWGPE---CNHL----CT----ACMN----N---GVCHE-DTGECICPPGFMGR--TCEKACELHT 237 (423)
T ss_dssp EEEECSSCT----TEESTT---SCEE----CC----CCCT----T---CEECT-TTCCEECCTTEEST--TSCEECCTTE
T ss_pred cccCCcCCC----CCCCCC---CCCC----CC----CCCC----C---CEEEC-CCCcEeCCCCccCC--CcccccCCCC
Confidence 345688999 556665 7642 42 3433 3 67865 36799999999987 6763 2
Q ss_pred ------cCccCCCCCCCCCCeeeecCCCeEEecCCCCee
Q 006787 526 ------NECKERSACQCDGCSCQNTWGGFECKCKGNLLF 558 (631)
Q Consensus 526 ------deC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~ 558 (631)
++|...++|. +++.|. .++|+|.|++||..
T Consensus 238 ~g~~C~~~C~~~~~C~-~~g~C~--~~~~~C~C~~G~~G 273 (423)
T 2gy5_A 238 FGRTCKERCSGQEGCK-SYVFCL--PDPYGCSCATGWKG 273 (423)
T ss_dssp ESTTSCEECCSTTTTT-TCCEEE--TTTTEEECCBTCBS
T ss_pred CCCCcCccCCCCCCCC-CCCEEC--CCCCeEEeCCCccc
Confidence 2454335677 667884 68899999999964
No 93
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.84 E-value=0.00021 Score=53.13 Aligned_cols=42 Identities=19% Similarity=0.562 Sum_probs=33.2
Q ss_pred ceeeCCCCcccCCCccccCcCccCCCCCCCCCCeeee----cCCCeEEecCCCCeecCCCCceee
Q 006787 507 TGCHCPKGFRGDGHKCEDINECKERSACQCDGCSCQN----TWGGFECKCKGNLLFIKEQDACIE 567 (631)
Q Consensus 507 ~~C~C~~Gy~g~~~~C~dideC~~~~~C~~~~~~C~n----t~Gsy~C~C~~G~~~~~d~~~C~~ 567 (631)
+.|.|++||.. ++|. ++++|++ ..++|.|.|++||. |..|+.
T Consensus 3 ~~C~C~~g~~~--------------~pC~-NGGtC~~~~~~~~~~y~C~C~~Gf~----G~~Ce~ 48 (52)
T 3ca7_A 3 PTYKCPETFDA--------------WYCL-NDAHCFAVKIADLPVYSCECAIGFM----GQRCEY 48 (52)
T ss_dssp CCBCCCHHHHH--------------HTSC-TTCEEEEEEETTEEEEEEECCTTEE----STTSCE
T ss_pred eeeECCCCCcC--------------CcCC-CCCEEecCccCCCCCEEEECCCCCc----CCCCcc
Confidence 46899999972 2888 8899997 35789999999996 556753
No 94
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.81 E-value=0.00027 Score=54.25 Aligned_cols=44 Identities=23% Similarity=0.504 Sum_probs=33.1
Q ss_pred ccccccccccCCCcccCCCC--CceeeCCCceeeecCCCCCeeeeCCCccceeecCCCccc
Q 006787 424 ETNECLERNGGCWQDTQANI--TACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARCS 482 (631)
Q Consensus 424 d~deC~~~~~~C~~~~~~~~--~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~ 482 (631)
++|+|..+| |. ++ ++|.++.++|.|.|++ ||.. |.. |++. ++|.
T Consensus 10 ~~d~C~snP--C~-----nga~gtC~~~~g~y~C~C~~--Gy~~-G~~---C~~~--~~C~ 55 (61)
T 2k2s_B 10 TPAACSSNP--CG-----PEAAGTCKETNSGYICRCNQ--GYRI-SLD---GTGN--VTCI 55 (61)
T ss_dssp SCCHHHHCS--SC-----SSSCCEEEECSSEEEEECCT--TEEE-EEC---SSSC--EEEE
T ss_pred CCCcCcCCC--Cc-----CCCccccccCCCceEeECCC--CCcc-CCC---CCCC--CEec
Confidence 578998777 98 77 7999999999999999 6531 433 7654 4554
No 95
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=96.80 E-value=0.0018 Score=54.38 Aligned_cols=61 Identities=25% Similarity=0.519 Sum_probs=51.9
Q ss_pred CCCceee-CCCceeeecCCCCCeeeeCCCccceeecCCCc-ccCCCCCCCCCCCCCCccccceeCC--CceeeCCCCcc
Q 006787 442 NITACKD-TFRGRLCECPIVKGVQYRGDGYISCQAYGPAR-CSINNGGCWSDTKNGLTFSACSESQ--ITGCHCPKGFR 516 (631)
Q Consensus 442 ~~~~C~~-~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~-C~~~~~~C~~~~~~g~~~~~C~~~~--~~~C~C~~Gy~ 516 (631)
.++.|.. .+|...|.|.. +|.+|+ ..|..+ +. |..++++|+.. +.|..+. --.|.|..||.
T Consensus 20 ~NA~C~r~~~G~e~CrCl~----gY~~dg-~~Cv~~--Np~C~~nNGGCd~n-------AeC~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 20 ENAACYRYLDGTEEWRCLL----GFKEVG-GKCVPA--SITCEENNGGCAPE-------AECTMDDKKEVECKCTKEGS 84 (105)
T ss_dssp TTEEEEECTTSCEEEEECT----TEEECS-SSEEEC--CCCTTSGGGGSCTT-------SEEEECTTSCEEEECCSTTC
T ss_pred CCCCeEECCCCCEeEEEEC----CeeccC-CEEEEC--CcchhhcCCCcCCC-------cEeEECCCCEEEeECCCCCC
Confidence 6789998 67889999999 556677 779987 77 99999999988 8999886 78899999975
No 96
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=96.62 E-value=0.0015 Score=46.72 Aligned_cols=36 Identities=17% Similarity=0.434 Sum_probs=28.5
Q ss_pred CccCC--CCCCCCCCeee--ecCCCeEEecCCCCeecCCCCceee
Q 006787 527 ECKER--SACQCDGCSCQ--NTWGGFECKCKGNLLFIKEQDACIE 567 (631)
Q Consensus 527 eC~~~--~~C~~~~~~C~--nt~Gsy~C~C~~G~~~~~d~~~C~~ 567 (631)
||..+ .||. ++++|+ +..++|+|.|++||. |..|..
T Consensus 2 ~C~~~~~~pC~-ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~ 41 (45)
T 1a3p_A 2 GXPSSYDGYCL-NGGVXMHIESLDSYTCNCVIGYS----GDRCQT 41 (45)
T ss_dssp CCTTCCSSCCS-SSCEEEECTTTSSEEEECCTTEE----TTTTCE
T ss_pred CcccCCCCCCC-CCCEEEeecCCCCEEEEcCCCCc----CCcCCc
Confidence 56542 4899 889998 788999999999995 556753
No 97
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=96.60 E-value=0.0012 Score=47.60 Aligned_cols=38 Identities=18% Similarity=0.437 Sum_probs=30.0
Q ss_pred cCcCccCC--CCCCCCCCeeeecC--CCeEEecCCCCeecCCCCceee
Q 006787 524 DINECKER--SACQCDGCSCQNTW--GGFECKCKGNLLFIKEQDACIE 567 (631)
Q Consensus 524 dideC~~~--~~C~~~~~~C~nt~--Gsy~C~C~~G~~~~~d~~~C~~ 567 (631)
+|++|... +||. + ++|.+.. ++|.|.|++||+ |..|..
T Consensus 2 ~i~~C~~~~~~pC~-n-G~C~~~~~~~~~~C~C~~Gyt----G~~Ce~ 43 (46)
T 1k36_A 2 SITKCSSDMNGYCL-H-GQCIYLVDMSQNYCRCEVGYT----GVRCEH 43 (46)
T ss_dssp CEECCCTTCCSSCS-S-EEEEEETTTTEEEEEECTTCS----STTSCC
T ss_pred ccccCCCCCCCCCC-C-CEeeccCCCCCEEEECCCCCc----cCCCCc
Confidence 57899872 4999 6 7999755 789999999995 566753
No 98
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=96.54 E-value=0.0024 Score=53.38 Aligned_cols=63 Identities=29% Similarity=0.658 Sum_probs=51.1
Q ss_pred CCCceeeC-CCceeeecCCCCCeeeeCCCccceeecCCCcccCCCCCCCCCCCCCCccccceeCC------CceeeCCCC
Q 006787 442 NITACKDT-FRGRLCECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSESQ------ITGCHCPKG 514 (631)
Q Consensus 442 ~~~~C~~~-~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~~~------~~~C~C~~G 514 (631)
.++.|.+. .+.+.|.|.+ +|.+|+ ..|..+....|..++++|+.. +.|.... ...|.|.+|
T Consensus 14 ~NA~C~r~~~g~e~C~C~~----gy~gdg-~~Cv~~~~~sC~~nNGGCd~n-------A~C~~~~~~~~~~ki~C~C~~g 81 (99)
T 1ob1_C 14 QNSGCFRHLDEREECKCLL----NYKQEG-DKCVENPNPTCNENNGGCDAD-------AKCTEEDSGSNGKKITCECTKP 81 (99)
T ss_dssp TTEEEECCTTSCCEEEECT----TEEEET-TEEEECSCCCSTTGGGGCCTT-------EEEECCSCSSSSCCCEEEECST
T ss_pred CCCCeEEcCCCCEEEEecC----CeecCC-CeEeeCCCCChhhcCCCcCCC-------ceeEecCCcccCCceEeEeCCC
Confidence 67899874 7889999999 556777 679986446899999999987 8898764 478999999
Q ss_pred cc
Q 006787 515 FR 516 (631)
Q Consensus 515 y~ 516 (631)
|.
T Consensus 82 ~~ 83 (99)
T 1ob1_C 82 DS 83 (99)
T ss_dssp TC
T ss_pred Cc
Confidence 75
No 99
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=96.44 E-value=0.0022 Score=47.71 Aligned_cols=40 Identities=33% Similarity=0.746 Sum_probs=30.6
Q ss_pred cccccccc-ccCCCcccCCCCCcee--eCCCceeeecCCCCCeeeeCCCccceee
Q 006787 424 ETNECLER-NGGCWQDTQANITACK--DTFRGRLCECPIVKGVQYRGDGYISCQA 475 (631)
Q Consensus 424 d~deC~~~-~~~C~~~~~~~~~~C~--~~~g~~~C~C~~~~G~~~~gdg~~~C~~ 475 (631)
++++|..+ ...|. ++++|+ +..++|.|.|++ || .|.. |+.
T Consensus 2 ~i~~C~~~~~~pC~-----ngg~C~~~~~~~~~~C~C~~--G~--~G~~---Ce~ 44 (53)
T 1egf_A 2 SYPGCPSSYDGYCL-----NGGVCMHIESLDSYTCNCVI--GY--SGDR---CQT 44 (53)
T ss_dssp EECCCCTTSSCSSC-----SSCEEEEESSSSCEEEECCT--TC--CSSS---SCC
T ss_pred CcccCCCCCCCcCC-----CCcEEEeeCCCCCEEEECCC--CC--cCCc---CCc
Confidence 57899875 12398 789999 889999999999 54 5544 865
No 100
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=96.34 E-value=0.0015 Score=50.46 Aligned_cols=36 Identities=22% Similarity=0.523 Sum_probs=29.8
Q ss_pred CcCccCCCCCCCCCCeeee-----cCCCeEEecCCCCeecCCCCcee
Q 006787 525 INECKERSACQCDGCSCQN-----TWGGFECKCKGNLLFIKEQDACI 566 (631)
Q Consensus 525 ideC~~~~~C~~~~~~C~n-----t~Gsy~C~C~~G~~~~~d~~~C~ 566 (631)
.|+|..+ ||. ++++|++ ..++|.|.|++||. |..|.
T Consensus 6 c~~C~~~-pC~-ngG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce 46 (63)
T 1hae_A 6 CAEKEKT-FCV-NGGECFMVKDLSNPSRYLCKCQPGFT----GARCT 46 (63)
T ss_dssp CCHHHHT-TSC-TTCEEEEEESSSSSCCEEEECCTTEE----STTSC
T ss_pred cCCCCCC-cCC-CCcEEecCCccCCCCCEEEECCCCCc----CCccC
Confidence 4677765 999 8999997 67899999999995 56675
No 101
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.30 E-value=0.00062 Score=74.21 Aligned_cols=55 Identities=31% Similarity=0.826 Sum_probs=19.7
Q ss_pred ccceeCCCceeeCCCCcccCCCccccCcCccCCCCCCCCCCeeeecCCCeEEecCCCCeecCCCCceeec
Q 006787 499 SACSESQITGCHCPKGFRGDGHKCEDINECKERSACQCDGCSCQNTWGGFECKCKGNLLFIKEQDACIER 568 (631)
Q Consensus 499 ~~C~~~~~~~C~C~~Gy~g~~~~C~dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C~~~ 568 (631)
+.|.+. +.|.|++||.|. .|+ +++|.. +|. ++++|++. ++|.|++||. +..|...
T Consensus 402 G~C~~~--~~C~C~~G~~G~--~C~-~~~C~~--~C~-~~g~C~~~---~~C~C~~G~~----G~~C~~~ 456 (463)
T 2wg3_C 402 GYCTPT--GKCCCSPGWEGD--FCR-TAKCEP--ACR-HGGVCVRP---NKCLCKKGYL----GPQCEQV 456 (463)
T ss_dssp EEECTT--SCEEECTTEEST--TSC-EECC----------------------------------------
T ss_pred CccCCC--CeECCCCCcCCC--cCC-cCcCCC--CCC-CCCEECCC---CEEECCCCcc----cCCCCCC
Confidence 357653 589999999987 885 678976 899 88999876 7999999995 5667543
No 102
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=96.23 E-value=0.0036 Score=70.92 Aligned_cols=89 Identities=25% Similarity=0.549 Sum_probs=59.5
Q ss_pred CCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCC---------cccCCC--CCCCCCCCCCCccccceeCCCceee
Q 006787 442 NITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPA---------RCSINN--GGCWSDTKNGLTFSACSESQITGCH 510 (631)
Q Consensus 442 ~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~---------~C~~~~--~~C~~~~~~g~~~~~C~~~~~~~C~ 510 (631)
+++.|. ...|.|++ +|.|.. |+-. .+ .|...+ ..|... +.|.. ..|.
T Consensus 439 ~~G~C~----~g~C~C~~----Gy~G~~---Cec~-~~~~~~~~~~~~C~~~~~~~~Cs~~-------G~C~~---G~C~ 496 (687)
T 3k6s_B 439 GKGFLE----CGICRCDT----GYIGKN---CECQ-TQGRSSQELEGSCRKDNNSIICSGL-------GDCVC---GQCL 496 (687)
T ss_dssp GSEEES----SSSEEECS----SEESTT---SCEE-SSSCCCSGGGSTTSSSTTSCGGGSS-------EEEET---TEEE
T ss_pred CCCEEe----CCEeEcCC----CCcCCc---cccc-CCcCCccccCCCCCCCCCCCcCCCC-------CEEeC---CEEE
Confidence 556776 34799999 667666 7621 12 354322 113322 66763 4899
Q ss_pred CC------CCcccCCCccc-cCcCccCC--CCCCCC--CCeeeecCCCeEEecCCCCeec
Q 006787 511 CP------KGFRGDGHKCE-DINECKER--SACQCD--GCSCQNTWGGFECKCKGNLLFI 559 (631)
Q Consensus 511 C~------~Gy~g~~~~C~-dideC~~~--~~C~~~--~~~C~nt~Gsy~C~C~~G~~~~ 559 (631)
|+ +||.|. .|+ ++++|... .+|. + +++|.+ | +|.|++||.+.
T Consensus 497 C~~~~~~~~G~~G~--~Ce~~~~~C~~~~~~~C~-~~~~G~C~~--g--~C~C~~G~~G~ 549 (687)
T 3k6s_B 497 CHTSDVPGKLIYGQ--YCECDTINCERYNGQVCG-GPGRGLCFC--G--KCRCHPGFEGS 549 (687)
T ss_dssp ECCCCSTTCCEEST--TSCEESSCSCEETTEETS-HHHHEEEET--T--EEEECTTCCST
T ss_pred cCCCCCCCCCcccc--ccccccccccCCCCcCcC-CCCCCeEEC--C--EEEcCCCCcCC
Confidence 99 999987 887 78889852 4687 6 789985 2 89999999643
No 103
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.22 E-value=0.003 Score=58.94 Aligned_cols=43 Identities=23% Similarity=0.614 Sum_probs=37.4
Q ss_pred ccccccccccC---CCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeec
Q 006787 424 ETNECLERNGG---CWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAY 476 (631)
Q Consensus 424 d~deC~~~~~~---C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i 476 (631)
+++||...++. |. +.|.|+.|+|.|.|++ ||.+.+|+ ++|+++
T Consensus 123 di~eC~~~~~~~~~C~-------~~C~n~~g~~~C~C~~--Gy~l~~d~-~~C~~~ 168 (170)
T 1szb_A 123 DIDECQVAPGEAPTCD-------HHCHNHLGGFYCSCRA--GYVLHRNK-RTCSEQ 168 (170)
T ss_dssp ECCTTCCCTTSCCSSS-------SEEEEETTEEEEECCT--TEEECTTS-SCEEEC
T ss_pred ccCcccCCCCCCCccC-------CccccCCCCEEEeCCC--CcEECCCC-Cccccc
Confidence 57899877654 88 5899999999999999 99999999 889875
No 104
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=96.04 E-value=0.004 Score=63.11 Aligned_cols=46 Identities=26% Similarity=0.603 Sum_probs=40.3
Q ss_pred ccccccc-ccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCccc
Q 006787 425 TNECLER-NGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARCS 482 (631)
Q Consensus 425 ~deC~~~-~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~ 482 (631)
.|||... +++|. +.|.++.++|+|.|+. ||.+..|+ ++|.+. ++|.
T Consensus 2 ~~eC~~~~~~~C~-------~~C~~~~~~~~C~C~~--G~~l~~d~-~sC~p~--~~c~ 48 (283)
T 3f1s_B 2 KNECHPERTDGCQ-------HFCLPGQESYTCSCAQ--GYRLGEDH-KQCVPH--DQCA 48 (283)
T ss_dssp -CCCCSSCSSSCS-------SBCCCCTTSCCCBCCT--TEEECTTS-SCEEEC--STTC
T ss_pred CCccCCCCCCCCC-------CEeeCCCCCeEecCCC--CcccCCCC-Cccccc--cccc
Confidence 6899988 88999 8999999999999999 99999998 899986 6654
No 105
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=96.02 E-value=0.0029 Score=64.09 Aligned_cols=42 Identities=21% Similarity=0.599 Sum_probs=36.5
Q ss_pred cCcCccCC--CCCCCCCCeeeecCCCeEEecCCCCeecCCCCceeec
Q 006787 524 DINECKER--SACQCDGCSCQNTWGGFECKCKGNLLFIKEQDACIER 568 (631)
Q Consensus 524 dideC~~~--~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C~~~ 568 (631)
|.|||... +.|. +.|.|+.|+|+|.|.+||.+..++.+|.+.
T Consensus 1 ~~~eC~~~~~~~C~---~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~ 44 (283)
T 3f1s_B 1 AKNECHPERTDGCQ---HFCLPGQESYTCSCAQGYRLGEDHKQCVPH 44 (283)
T ss_dssp --CCCCSSCSSSCS---SBCCCCTTSCCCBCCTTEEECTTSSCEEEC
T ss_pred CCCccCCCCCCCCC---CEeeCCCCCeEecCCCCcccCCCCCccccc
Confidence 47899864 6899 899999999999999999999999999973
No 106
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.59 E-value=0.0057 Score=63.81 Aligned_cols=41 Identities=34% Similarity=0.675 Sum_probs=27.9
Q ss_pred cccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeec
Q 006787 425 TNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAY 476 (631)
Q Consensus 425 ~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i 476 (631)
+|||. .++.|. +.|.|+.|+|.|.|++ ||.+..|+ ++|...
T Consensus 1 i~ec~-~~~~C~-------~~C~n~~g~~~C~C~~--g~~l~~d~-~~C~~~ 41 (349)
T 3v64_C 1 VNECA-EEGYCS-------QGCTNSEGAFQCWCEA--GYELRPDR-RSCKAL 41 (349)
T ss_dssp ---------CCS-------SEECCC---CCEECCT--TEEECTTS-SCEEES
T ss_pred CcccC-CCCCCc-------CeeecCCCCeEEECCC--CccCCCCC-Cccccc
Confidence 57998 677899 8999999999999999 99999999 899876
No 107
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=95.45 E-value=0.0065 Score=45.13 Aligned_cols=31 Identities=16% Similarity=0.549 Sum_probs=26.1
Q ss_pred CCCCCCCCeee--ecCCCeEEecCCCCeecCCCCceee
Q 006787 532 SACQCDGCSCQ--NTWGGFECKCKGNLLFIKEQDACIE 567 (631)
Q Consensus 532 ~~C~~~~~~C~--nt~Gsy~C~C~~G~~~~~d~~~C~~ 567 (631)
+||. ++++|+ +..++|.|.|++||+ |..|..
T Consensus 12 ~pC~-nGG~C~~~~~~~~~~C~C~~Gyt----G~~Ce~ 44 (53)
T 1nql_B 12 GYCL-HDGVCMYIEALDKYACNCVVGYI----GERCQY 44 (53)
T ss_dssp CEEC-TTCEEEEETTTTEEEEEECTTEE----STTSCE
T ss_pred CCCC-CCeEEeeecCCCCEEEecCCCCc----CCCCCc
Confidence 5899 889998 678899999999995 566754
No 108
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=95.43 E-value=0.013 Score=56.92 Aligned_cols=92 Identities=23% Similarity=0.544 Sum_probs=59.6
Q ss_pred CCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCC---------cccCC--CCCCCCCCCCCCccccceeCCCceee
Q 006787 442 NITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPA---------RCSIN--NGGCWSDTKNGLTFSACSESQITGCH 510 (631)
Q Consensus 442 ~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~---------~C~~~--~~~C~~~~~~g~~~~~C~~~~~~~C~ 510 (631)
+++.|.. ..|.|++ +|.|.. |+-. .+ .|... ...|... ++|.+ ..|.
T Consensus 100 g~G~C~~----g~C~C~~----G~~G~~---Cec~-~~~~~~~~~~~~C~~~~~~~~Csg~-------G~C~~---g~C~ 157 (217)
T 2p28_B 100 GKGFLEC----GICRCDT----GYIGKN---CECQ-TQGRSSQELEGSCRKDNNSIICSGL-------GDCVC---GQCL 157 (217)
T ss_dssp TSEEEET----TEEEECT----TEESTT---SCEE-CCCCC-GGGGGGGBSSTTSCBGGGT-------EEEET---TEEE
T ss_pred CCceEEC----CEEECCC----CccCCc---cccc-CcccccccCCCcCCCCCCCCCCCCC-------CEEeC---CceE
Confidence 6678874 4799999 566665 6521 12 23321 1122221 55653 5899
Q ss_pred CCCC------cccCCCccc-cCcCccCC--CCCCCCC--CeeeecCCCeEEecCCCCeecCCCCcee
Q 006787 511 CPKG------FRGDGHKCE-DINECKER--SACQCDG--CSCQNTWGGFECKCKGNLLFIKEQDACI 566 (631)
Q Consensus 511 C~~G------y~g~~~~C~-dideC~~~--~~C~~~~--~~C~nt~Gsy~C~C~~G~~~~~d~~~C~ 566 (631)
|.+| |.|. .|+ ++++|... .+|. .+ ++|.+ .+|.|.+||. |..|.
T Consensus 158 C~~gw~~~~~~~G~--~Ce~~~~~C~~~~g~~C~-~~~~G~C~~----g~C~C~~G~~----G~~C~ 213 (217)
T 2p28_B 158 CHTSDVPGKLIYGQ--YCECDTINCERYNGQVCG-GPGRGLCFC----GKCRCHPGFE----GSACQ 213 (217)
T ss_dssp ECCCCSTTCCEEST--TSCEESSCSCEETTEETT-CTTTEEEET----TEEEECTTEE----STTSC
T ss_pred CCCCCCCcccEECC--CcccCCccCCCCCCCCCC-CCCCcEEeC----CeeECCCCCc----cCCcC
Confidence 9999 5666 887 67889763 3688 66 89985 3899999995 45564
No 109
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=95.43 E-value=0.0059 Score=43.93 Aligned_cols=37 Identities=22% Similarity=0.644 Sum_probs=27.9
Q ss_pred ccccccc---cccCCCcccCCCCCceeeCC--CceeeecCCCCCeeeeCCCccceee
Q 006787 424 ETNECLE---RNGGCWQDTQANITACKDTF--RGRLCECPIVKGVQYRGDGYISCQA 475 (631)
Q Consensus 424 d~deC~~---~~~~C~~~~~~~~~~C~~~~--g~~~C~C~~~~G~~~~gdg~~~C~~ 475 (631)
++++|.. ++ |. + ++|.+.. ++|.|.|++ +|.|.. |+.
T Consensus 2 ~i~~C~~~~~~p--C~-----n-G~C~~~~~~~~~~C~C~~----GytG~~---Ce~ 43 (46)
T 1k36_A 2 SITKCSSDMNGY--CL-----H-GQCIYLVDMSQNYCRCEV----GYTGVR---CEH 43 (46)
T ss_dssp CEECCCTTCCSS--CS-----S-EEEEEETTTTEEEEEECT----TCSSTT---SCC
T ss_pred ccccCCCCCCCC--CC-----C-CEeeccCCCCCEEEECCC----CCccCC---CCc
Confidence 5788977 55 98 7 7999754 689999999 556554 763
No 110
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=95.40 E-value=0.0046 Score=68.41 Aligned_cols=53 Identities=23% Similarity=0.641 Sum_probs=12.3
Q ss_pred CceeeCCCCcccCCCccc-----------cCcCccCCCCCCCCCCeeeec--CCCeEEecCCCCeecCCCCcee
Q 006787 506 ITGCHCPKGFRGDGHKCE-----------DINECKERSACQCDGCSCQNT--WGGFECKCKGNLLFIKEQDACI 566 (631)
Q Consensus 506 ~~~C~C~~Gy~g~~~~C~-----------dideC~~~~~C~~~~~~C~nt--~Gsy~C~C~~G~~~~~d~~~C~ 566 (631)
.+.|.|++||.|. .|+ ++++|... +|. +++.|.++ ..+++|.|++||. |..|.
T Consensus 459 tg~C~C~~g~~G~--~Ce~C~~G~~g~~~~~~~C~~C-~C~-~~gs~~~~C~~~tG~C~C~~G~~----G~~Ce 524 (525)
T 4aqs_A 459 TGYCYCKRLVTGQ--RCDQCLPQHWGLSNDLDGCRPC-DCD-LGGALNNSCSEDSGQCSCLPHMI----GRQCN 524 (525)
T ss_dssp TCCBCBCTTCCST--TTCC-------------------------------------------------------
T ss_pred CCEEECCCCCcCC--CcccCCCCccCCCCCCCCCcCC-CCC-CCCccCCccCCCCCeeECCCCCc----CCCCC
Confidence 5679999999886 553 46677764 566 55555443 2345899999995 45553
No 111
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=95.31 E-value=0.01 Score=45.67 Aligned_cols=44 Identities=20% Similarity=0.281 Sum_probs=32.3
Q ss_pred cccccccccCCCcccCCCCCceee-----CCCceeeecCCCCCeeeeCCCccceeecCCCcccC
Q 006787 425 TNECLERNGGCWQDTQANITACKD-----TFRGRLCECPIVKGVQYRGDGYISCQAYGPARCSI 483 (631)
Q Consensus 425 ~deC~~~~~~C~~~~~~~~~~C~~-----~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~ 483 (631)
.|+|..++ |. ++++|++ ..++|+|.|++ +|.|.. |+.. +++|..
T Consensus 6 c~~C~~~p--C~-----ngG~C~~~~~~~~~~~y~C~C~~----Gf~G~~---Ce~~-i~~~~~ 54 (63)
T 1hae_A 6 CAEKEKTF--CV-----NGGECFMVKDLSNPSRYLCKCQP----GFTGAR---CTEN-VPMKVQ 54 (63)
T ss_dssp CCHHHHTT--SC-----TTCEEEEEESSSSSCCEEEECCT----TEESTT---SCEE-CCSSCT
T ss_pred cCCCCCCc--CC-----CCcEEecCCccCCCCCEEEECCC----CCcCCc---cCcC-cCcccc
Confidence 45887766 98 8899997 67899999999 556554 9732 366653
No 112
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=95.27 E-value=0.011 Score=42.09 Aligned_cols=37 Identities=30% Similarity=0.631 Sum_probs=26.5
Q ss_pred ccccc-ccCCCcccCCCCCcee--eCCCceeeecCCCCCeeeeCCCccceee
Q 006787 427 ECLER-NGGCWQDTQANITACK--DTFRGRLCECPIVKGVQYRGDGYISCQA 475 (631)
Q Consensus 427 eC~~~-~~~C~~~~~~~~~~C~--~~~g~~~C~C~~~~G~~~~gdg~~~C~~ 475 (631)
+|..+ ...|. ++++|. +..++|+|.|++ +|.|.. |+.
T Consensus 2 ~C~~~~~~pC~-----ngg~C~~~~~~~~~~C~C~~----G~~G~~---Ce~ 41 (45)
T 1a3p_A 2 GXPSSYDGYCL-----NGGVXMHIESLDSYTCNCVI----GYSGDR---CQT 41 (45)
T ss_dssp CCTTCCSSCCS-----SSCEEEECTTTSSEEEECCT----TEETTT---TCE
T ss_pred CcccCCCCCCC-----CCCEEEeecCCCCEEEEcCC----CCcCCc---CCc
Confidence 56554 11388 779998 788999999999 455554 764
No 113
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=94.97 E-value=0.0085 Score=55.11 Aligned_cols=30 Identities=30% Similarity=0.707 Sum_probs=25.4
Q ss_pred ccceeCC-CceeeCCCCcccCCCccccCcCccC
Q 006787 499 SACSESQ-ITGCHCPKGFRGDGHKCEDINECKE 530 (631)
Q Consensus 499 ~~C~~~~-~~~C~C~~Gy~g~~~~C~dideC~~ 530 (631)
++|.+.. +|.|.|++||.|+ .|++++||..
T Consensus 131 g~C~~~~~~~~c~C~~g~~G~--~Ce~~~~c~~ 161 (162)
T 1g1s_A 131 GECLETIGNYTCSCYPGFYGP--ECEYVRDDDD 161 (162)
T ss_dssp EEEEECSSSEEEEECTTEEST--TSCEECC---
T ss_pred CEEecCCCCceEeCCCCCcCc--ccccCcccCC
Confidence 7899999 9999999999987 8999999975
No 114
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=94.90 E-value=0.018 Score=58.89 Aligned_cols=41 Identities=24% Similarity=0.710 Sum_probs=34.2
Q ss_pred cCcCccC----CCCCCCCCCeeeecC------CCeEEecCCCCeecCCCCceee
Q 006787 524 DINECKE----RSACQCDGCSCQNTW------GGFECKCKGNLLFIKEQDACIE 567 (631)
Q Consensus 524 dideC~~----~~~C~~~~~~C~nt~------Gsy~C~C~~G~~~~~d~~~C~~ 567 (631)
+.++|.. ++.|. +.|.+++ ++|+|.|+.||.+..|+++|.+
T Consensus 266 ~~n~C~~~~~~ng~Cs---~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~~ 316 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQ---YLCLPAPQINPHSPKFTCACPDGMLLARDMRSCLT 316 (316)
T ss_dssp CCCTTSSSSSGGGGCS---SEEEECCCCSTTCCSEEEECCTTCEECTTSSCEEC
T ss_pred ccccccccccCCCCcC---cccCCCccccCCCCCeEeeCCCCCEECCCCCccCC
Confidence 4577865 34688 8999886 6899999999999999999974
No 115
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=94.60 E-value=0.014 Score=53.64 Aligned_cols=43 Identities=23% Similarity=0.521 Sum_probs=31.5
Q ss_pred cccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCcccC
Q 006787 425 TNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARCSI 483 (631)
Q Consensus 425 ~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~ 483 (631)
.++|...+ |. +++.|.++.++|.|.|++ | |.|+. |+.+ ++|..
T Consensus 119 ~~~c~~~~--C~-----~~g~C~~~~~~~~c~C~~--g--~~G~~---Ce~~--~~c~~ 161 (162)
T 1g1s_A 119 TASCQDMS--CS-----KQGECLETIGNYTCSCYP--G--FYGPE---CEYV--RDDDD 161 (162)
T ss_dssp ECCCCTTG--GG-----GSEEEEECSSSEEEEECT--T--EESTT---SCEE--CC---
T ss_pred eCCCcCCC--CC-----CCCEEecCCCCceEeCCC--C--CcCcc---cccC--cccCC
Confidence 45676555 87 679999999999999999 5 55554 9987 78864
No 116
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=94.52 E-value=0.022 Score=52.12 Aligned_cols=42 Identities=26% Similarity=0.605 Sum_probs=34.8
Q ss_pred cccccccc-ccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceee
Q 006787 424 ETNECLER-NGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQA 475 (631)
Q Consensus 424 d~deC~~~-~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~ 475 (631)
++|||... ...|. +.|.|+.++|.|.|++ ||.+.+++ ++|++
T Consensus 116 d~~eC~~~~~~~C~-------~~C~n~~g~~~C~C~~--Gy~l~~~~-~~C~~ 158 (159)
T 1nzi_A 116 DINECTDFVDVPCS-------HFCNNFIGGYFCSCPP--EYFLHDDM-KNCGV 158 (159)
T ss_dssp ECCTTTC-CCCCSS-------SEEEEETTEEEEECCT--TCEECTTS-SCEEC
T ss_pred cCcccCCCCCCCCC-------CcccCcCCCEEEecCC--CcEECCCC-Ccccc
Confidence 57899764 34587 6899999999999999 99999999 78875
No 117
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.42 E-value=0.011 Score=64.38 Aligned_cols=75 Identities=37% Similarity=0.888 Sum_probs=30.2
Q ss_pred ccc-cCccccCCCCcccCCccccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCccc
Q 006787 404 AIC-AGFKEATEPQICLTGDLETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARCS 482 (631)
Q Consensus 404 ~~C-~Gf~~~~~g~~C~~~~~d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~ 482 (631)
..| .+|. +..|. +++|.. + |. + +.|.+. ++|.|++ +|.|.. |+. ++|.
T Consensus 379 ~~C~~~~~----g~~c~-----~~~C~~-~--C~-----n-G~C~~~---~~C~C~~----G~~G~~---C~~---~~C~ 427 (463)
T 2wg3_C 379 EECRATVQ----PAQTL-----TSECSR-L--CR-----N-GYCTPT---GKCCCSP----GWEGDF---CRT---AKCE 427 (463)
T ss_dssp GGGCCCCC----CCCCC-----CCHHHH-H--CC-----S-EEECTT---SCEEECT----TEESTT---SCE---ECC-
T ss_pred ccCCCCCc----CCCCc-----cccccC-C--CC-----C-CccCCC---CeECCCC----CcCCCc---CCc---CcCC
Confidence 356 5553 34565 568864 3 87 5 689764 4899999 566665 853 5675
Q ss_pred CCCCCCCCCCCCCCccccceeCCCceeeCCCCcccCCCccc
Q 006787 483 INNGGCWSDTKNGLTFSACSESQITGCHCPKGFRGDGHKCE 523 (631)
Q Consensus 483 ~~~~~C~~~~~~g~~~~~C~~~~~~~C~C~~Gy~g~~~~C~ 523 (631)
. .| .|+ ++|++. +.|.|++||.|. .|+
T Consensus 428 ~---~C----~~~---g~C~~~--~~C~C~~G~~G~--~C~ 454 (463)
T 2wg3_C 428 P---AC----RHG---GVCVRP--NKCLCKKGYLGP--QCE 454 (463)
T ss_dssp -----------------------------------------
T ss_pred C---CC----CCC---CEECCC--CEEECCCCcccC--CCC
Confidence 3 34 343 678764 799999999986 665
No 118
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.27 E-value=0.026 Score=63.81 Aligned_cols=42 Identities=26% Similarity=0.634 Sum_probs=37.7
Q ss_pred cCcCccCC-CCCCCCCCeeeecC-CCeEEecCCCCeecCCCCceeec
Q 006787 524 DINECKER-SACQCDGCSCQNTW-GGFECKCKGNLLFIKEQDACIER 568 (631)
Q Consensus 524 dideC~~~-~~C~~~~~~C~nt~-Gsy~C~C~~G~~~~~d~~~C~~~ 568 (631)
.+|||..+ +.|. +.|.+++ |+|+|.|++||.+..++.+|.+.
T Consensus 264 ~~n~C~~~ng~C~---~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~ 307 (628)
T 4a0p_A 264 GWNECASSNGHCS---HLCLAVPVGGFVCGCPAHYSLNADNRTCSAP 307 (628)
T ss_dssp CCCTTTTTGGGCS---SEEEEETTTEEEEECSTTCEECTTSSCEECC
T ss_pred cceEeccCCCCcc---hhhhcCCCCCeeEEcCCCcEecccCCcCccc
Confidence 57899874 6898 8999999 99999999999999999999864
No 119
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=93.98 E-value=0.025 Score=62.61 Aligned_cols=38 Identities=21% Similarity=0.539 Sum_probs=33.3
Q ss_pred cCcCccCCCCCCCCCCeeee-cCCCeEEecC-CCCeecCCCCceee
Q 006787 524 DINECKERSACQCDGCSCQN-TWGGFECKCK-GNLLFIKEQDACIE 567 (631)
Q Consensus 524 dideC~~~~~C~~~~~~C~n-t~Gsy~C~C~-~G~~~~~d~~~C~~ 567 (631)
++|+|..+ ||. ++++|.+ ..++|.|.|+ .||. |..|+.
T Consensus 1 ~~d~C~~~-PC~-ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~ 40 (553)
T 1q4g_A 1 PVNPCCYY-PCQ-HQGICVRFGLDRYQCDCTRTGYS----GPNCTI 40 (553)
T ss_dssp CCCGGGGC-CCC-TTCEEEEETTTEEEEECTTSSEE----TTTTCE
T ss_pred CCCcCCCC-CCC-CCCCcCCCCCCceEeeCCCCCcC----CCCCCC
Confidence 36899987 999 9999999 8999999999 9995 677864
No 120
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=93.21 E-value=0.047 Score=61.59 Aligned_cols=41 Identities=27% Similarity=0.625 Sum_probs=36.6
Q ss_pred cCcCccCC-CCCCCCCCeeeecCCCeEEecCCCCeecCCCCceee
Q 006787 524 DINECKER-SACQCDGCSCQNTWGGFECKCKGNLLFIKEQDACIE 567 (631)
Q Consensus 524 dideC~~~-~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C~~ 567 (631)
..++|..+ +.|. +.|.+++++|+|.|+.||.+..|+++|.+
T Consensus 577 ~~~~C~~~ng~C~---~~C~~~~~~~~C~C~~g~~l~~d~~~C~~ 618 (619)
T 3s94_A 577 GSNPCAEENGGCS---HLCLYRPQGLRCACPIGFELISDMKTCIV 618 (619)
T ss_dssp CCCGGGSGGGGCS---SEEEEETTEEEEECCTTCEECSSTTCEEC
T ss_pred ccccCCCCCCChh---HhhccCCCCeEEECCCCCEECCCCCcCCC
Confidence 46789864 6899 99999999999999999999999999975
No 121
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=93.15 E-value=0.061 Score=54.94 Aligned_cols=41 Identities=34% Similarity=0.586 Sum_probs=35.0
Q ss_pred cccccccc---ccCCCcccCCCCCceeeCC------CceeeecCCCCCeeeeCCCcccee
Q 006787 424 ETNECLER---NGGCWQDTQANITACKDTF------RGRLCECPIVKGVQYRGDGYISCQ 474 (631)
Q Consensus 424 d~deC~~~---~~~C~~~~~~~~~~C~~~~------g~~~C~C~~~~G~~~~gdg~~~C~ 474 (631)
..|+|..+ +++|. +.|.+++ ++|+|.|+. ||.+..|+ ++|.
T Consensus 266 ~~n~C~~~~~~ng~Cs-------~~C~~~p~~~~~~~~~~C~C~~--g~~l~~d~-~~C~ 315 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQ-------YLCLPAPQINPHSPKFTCACPD--GMLLARDM-RSCL 315 (316)
T ss_dssp CCCTTSSSSSGGGGCS-------SEEEECCCCSTTCCSEEEECCT--TCEECTTS-SCEE
T ss_pred ccccccccccCCCCcC-------cccCCCccccCCCCCeEeeCCC--CCEECCCC-CccC
Confidence 36788876 78898 8999875 589999999 99999999 8886
No 122
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=92.47 E-value=0.078 Score=54.42 Aligned_cols=41 Identities=17% Similarity=0.496 Sum_probs=34.6
Q ss_pred CcCccCC-CCCCCCCCeeeecCC--CeEEecCCCCeecCCCCceeec
Q 006787 525 INECKER-SACQCDGCSCQNTWG--GFECKCKGNLLFIKEQDACIER 568 (631)
Q Consensus 525 ideC~~~-~~C~~~~~~C~nt~G--sy~C~C~~G~~~~~d~~~C~~~ 568 (631)
.++|..+ +.|. +.|.+.++ +|+|.|+.||.+..|+++|...
T Consensus 267 ~n~C~~~ng~Cs---~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~ 310 (318)
T 3sov_A 267 TNPCGIDNGGCS---HLCLMSPVKPFYQCACPTGVKLLENGKTCKDG 310 (318)
T ss_dssp CCTTTTTGGGCS---SEEEECSSTTSEEEECSTTCCBCTTSSCBCC-
T ss_pred ccccccCCCCcc---eEEecCCCCCCeEEECCCCCEECCCCCCCCCC
Confidence 4678763 6898 89999886 7999999999999999999864
No 123
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=92.38 E-value=0.066 Score=59.48 Aligned_cols=37 Identities=22% Similarity=0.739 Sum_probs=31.5
Q ss_pred CcCccCCCCCCCCCCeeee-cCCCeEEecC-CCCeecCCCCceee
Q 006787 525 INECKERSACQCDGCSCQN-TWGGFECKCK-GNLLFIKEQDACIE 567 (631)
Q Consensus 525 ideC~~~~~C~~~~~~C~n-t~Gsy~C~C~-~G~~~~~d~~~C~~ 567 (631)
+|+|..+ ||. ++++|++ ..++|.|.|+ +||. |..|..
T Consensus 1 vd~C~s~-PC~-ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~ 39 (587)
T 3nt1_A 1 ANPCCSN-PCQ-NRGECMSTGFDQYKCDCTRTGFY----GENCTT 39 (587)
T ss_dssp CCTTTTC-CCC-TTCEEEEEETTEEEEECTTSSEE----TTTTCE
T ss_pred CCCCCCC-CCC-CCCEeeCCCCCCeEEecCCCCcc----CCCCCC
Confidence 5899987 999 9999996 5699999999 9995 677865
No 124
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=92.37 E-value=0.067 Score=60.37 Aligned_cols=43 Identities=33% Similarity=0.631 Sum_probs=38.5
Q ss_pred ccccccccccCCCcccCCCCCceeeCC-CceeeecCCCCCeeeeCCCccceeec
Q 006787 424 ETNECLERNGGCWQDTQANITACKDTF-RGRLCECPIVKGVQYRGDGYISCQAY 476 (631)
Q Consensus 424 d~deC~~~~~~C~~~~~~~~~~C~~~~-g~~~C~C~~~~G~~~~gdg~~~C~~i 476 (631)
.+|+|..++++|. +.|.+++ ++|+|.|+. ||.+..|+ ++|...
T Consensus 264 ~~n~C~~~ng~C~-------~~C~~~~~~~~~C~C~~--g~~l~~d~-~~C~~~ 307 (628)
T 4a0p_A 264 GWNECASSNGHCS-------HLCLAVPVGGFVCGCPA--HYSLNADN-RTCSAP 307 (628)
T ss_dssp CCCTTTTTGGGCS-------SEEEEETTTEEEEECST--TCEECTTS-SCEECC
T ss_pred cceEeccCCCCcc-------hhhhcCCCCCeeEEcCC--CcEecccC-CcCccc
Confidence 3789998888998 8999999 999999999 99999999 899864
No 125
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=92.21 E-value=0.073 Score=54.61 Aligned_cols=42 Identities=36% Similarity=0.655 Sum_probs=35.9
Q ss_pred cccccccccCCCcccCCCCCceeeCCC--ceeeecCCCCCeeeeCCCccceeec
Q 006787 425 TNECLERNGGCWQDTQANITACKDTFR--GRLCECPIVKGVQYRGDGYISCQAY 476 (631)
Q Consensus 425 ~deC~~~~~~C~~~~~~~~~~C~~~~g--~~~C~C~~~~G~~~~gdg~~~C~~i 476 (631)
.|+|..++++|. +.|...++ +|+|.|+. ||.+..|+ ++|.+.
T Consensus 267 ~n~C~~~ng~Cs-------~~C~~~~~~~~~~C~C~~--g~~l~~d~-~~c~~~ 310 (318)
T 3sov_A 267 TNPCGIDNGGCS-------HLCLMSPVKPFYQCACPT--GVKLLENG-KTCKDG 310 (318)
T ss_dssp CCTTTTTGGGCS-------SEEEECSSTTSEEEECST--TCCBCTTS-SCBCC-
T ss_pred ccccccCCCCcc-------eEEecCCCCCCeEEECCC--CCEECCCC-CCCCCC
Confidence 578988888998 88998876 79999999 99999999 788764
No 126
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=91.49 E-value=0.096 Score=59.02 Aligned_cols=42 Identities=38% Similarity=0.790 Sum_probs=37.8
Q ss_pred ccccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceee
Q 006787 424 ETNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQA 475 (631)
Q Consensus 424 d~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~ 475 (631)
..|+|..++++|. +.|.+++++|+|.|+. ||.+..|+ ++|..
T Consensus 577 ~~~~C~~~ng~C~-------~~C~~~~~~~~C~C~~--g~~l~~d~-~~C~~ 618 (619)
T 3s94_A 577 GSNPCAEENGGCS-------HLCLYRPQGLRCACPI--GFELISDM-KTCIV 618 (619)
T ss_dssp CCCGGGSGGGGCS-------SEEEEETTEEEEECCT--TCEECSST-TCEEC
T ss_pred ccccCCCCCCChh-------HhhccCCCCeEEECCC--CCEECCCC-CcCCC
Confidence 3689998889999 8999999999999999 99999999 78863
No 127
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=89.73 E-value=0.21 Score=36.83 Aligned_cols=30 Identities=27% Similarity=0.712 Sum_probs=23.9
Q ss_pred CCCcccCCCCCcee--eCCCceeeecCCCCCeeeeCCCccceee
Q 006787 434 GCWQDTQANITACK--DTFRGRLCECPIVKGVQYRGDGYISCQA 475 (631)
Q Consensus 434 ~C~~~~~~~~~~C~--~~~g~~~C~C~~~~G~~~~gdg~~~C~~ 475 (631)
.|. ++++|. +..++|.|.|++ +|.|.. |+.
T Consensus 13 pC~-----nGG~C~~~~~~~~~~C~C~~----GytG~~---Ce~ 44 (53)
T 1nql_B 13 YCL-----HDGVCMYIEALDKYACNCVV----GYIGER---CQY 44 (53)
T ss_dssp EEC-----TTCEEEEETTTTEEEEEECT----TEESTT---SCE
T ss_pred CCC-----CCeEEeeecCCCCEEEecCC----CCcCCC---CCc
Confidence 387 779998 678899999999 566665 864
No 128
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=89.73 E-value=0.15 Score=38.45 Aligned_cols=31 Identities=16% Similarity=0.551 Sum_probs=24.6
Q ss_pred CCCCCCCeeee----cCCCeEEecCCCCeecCCCCceeec
Q 006787 533 ACQCDGCSCQN----TWGGFECKCKGNLLFIKEQDACIER 568 (631)
Q Consensus 533 ~C~~~~~~C~n----t~Gsy~C~C~~G~~~~~d~~~C~~~ 568 (631)
+|. ++++|.. ..++|.|.|++||. |..|+..
T Consensus 15 pC~-NGGtC~~~~~~~~~~~~C~C~~Gf~----G~~Ce~~ 49 (58)
T 3ltf_D 15 YCL-NDAHCFAVKIADLPVYSCECAIGFM----GQRCEYK 49 (58)
T ss_dssp TSC-SSCEEEEEEETTEEEEEEEECTTEE----SSSSCEE
T ss_pred cCC-CCCEEeCCccCCCCCEEeECCCCCc----cCCCccc
Confidence 798 8899984 44689999999995 6677653
No 129
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=88.84 E-value=0.65 Score=42.61 Aligned_cols=24 Identities=21% Similarity=0.511 Sum_probs=16.5
Q ss_pred CCCceeeCC--Cceee-ecCCCCCeeeeCCC
Q 006787 442 NITACKDTF--RGRLC-ECPIVKGVQYRGDG 469 (631)
Q Consensus 442 ~~~~C~~~~--g~~~C-~C~~~~G~~~~gdg 469 (631)
++++|.... +.++| .|++ ++.|..
T Consensus 5 ~~g~C~~~~~~g~~~C~~C~~----g~~G~~ 31 (162)
T 1klo_A 5 GGSSCAIVPKTKEVVCTHCPT----GTAGKR 31 (162)
T ss_dssp TTCCEEECSSSCCEEECSCCT----TEESTT
T ss_pred CcCcccccCCCCCEEeCCCCC----CCcCCC
Confidence 667887654 56888 6888 555554
No 130
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=88.78 E-value=0.21 Score=55.27 Aligned_cols=37 Identities=24% Similarity=0.618 Sum_probs=31.0
Q ss_pred cccccccccCCCcccCCCCCceee-CCCceeeecC-CCCCeeeeCCCccceee
Q 006787 425 TNECLERNGGCWQDTQANITACKD-TFRGRLCECP-IVKGVQYRGDGYISCQA 475 (631)
Q Consensus 425 ~deC~~~~~~C~~~~~~~~~~C~~-~~g~~~C~C~-~~~G~~~~gdg~~~C~~ 475 (631)
+|+|.+++ |. |++.|.+ ..++|+|.|+ + +|.|.. |+.
T Consensus 2 ~d~C~~~P--C~-----ngG~C~~~~~~~y~C~C~~~----G~~G~~---Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYP--CQ-----HQGICVRFGLDRYQCDCTRT----GYSGPN---CTI 40 (553)
T ss_dssp CCGGGGCC--CC-----TTCEEEEETTTEEEEECTTS----SEETTT---TCE
T ss_pred CCcCCCCC--CC-----CCCCcCCCCCCceEeeCCCC----CcCCCC---CCC
Confidence 57898887 99 8899999 8999999999 8 556554 875
No 131
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=88.47 E-value=0.48 Score=53.25 Aligned_cols=63 Identities=16% Similarity=0.232 Sum_probs=50.2
Q ss_pred CCCEEEEEecCccCHHHHHHHHHHcCCcEEEEEeCCCCCccccCCCCCCCCcCCcccccCccEEEEeHHHHHHHHHHHHc
Q 006787 99 PRPTVLLLDRGECYFALKVWHGQQAGAAAVLVADSVDEPLITMDSPEESTDANGYVEKIGIPSALIDRAFGLSLKEALKK 178 (631)
Q Consensus 99 ~~~~i~LV~RG~CsF~~Kv~nAq~aGA~avII~~~~~~~~~~m~~~~~~~~~~~~~~~i~IP~~~I~~~~G~~l~~~l~~ 178 (631)
..++|+|.+|+ |..|..+++.+||.++|++++..+. .....||+++|+..+|..|+.++..
T Consensus 280 v~gkivl~~~~---~~~~~~~~~~~Ga~gvi~~~~~~~~----------------~~~~~lP~~~v~~~~g~~i~~~~~~ 340 (621)
T 3vta_A 280 LKGKIVVCEAS---FGPHEFFKSLDGAAGVLMTSNTRDY----------------ADSYPLPSSVLDPNDLLATLRYIYS 340 (621)
T ss_dssp TTTSEEECSSC---CCHHHHHHHHTTCSEEEEECSCCSS----------------CCCCSSSEEEECHHHHHHHHHHHHH
T ss_pred ccceEEEEecC---CChhHHhhhhcceeEEEEEecCCCc----------------ccccccceEEECHHHHHHHHHHHhc
Confidence 34779998764 6789999999999999999875221 1134789999999999999999886
Q ss_pred CC
Q 006787 179 GE 180 (631)
Q Consensus 179 g~ 180 (631)
..
T Consensus 341 ~~ 342 (621)
T 3vta_A 341 IR 342 (621)
T ss_dssp HS
T ss_pred cC
Confidence 54
No 132
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=86.70 E-value=3.1 Score=39.33 Aligned_cols=93 Identities=12% Similarity=0.240 Sum_probs=56.0
Q ss_pred hhhhhhhhccccCCCcchhhhHHHHhhhcCCcccc-chhhhHHHHHHh-cCCChhhhccccCCCcchhhchHHHHHHHHh
Q 006787 293 RQLCVHRVANESNRSWVWWDYVTDFHIRCSMKEKR-YSKECAEEVMKS-LDLPIEKIRKCIGDPEADVENEVLKTEQEFQ 370 (631)
Q Consensus 293 rqlCi~~~~~~~~~~~~ww~Y~~~f~~~C~~~~~~-y~~~C~~~v~~~-~~~~~~~v~~C~~d~~~~~~n~iL~~e~~~~ 370 (631)
--.|+++.... +||+|....-..=...... ...+=..++... +|++.+++.+|+.+.... ..++......
T Consensus 85 aa~a~~~~~~~-----~f~~~~~aLf~~~~~~~~~~~~~~~L~~~a~~~~Gld~~~~~~~l~s~~~~---~~v~~~~~~a 156 (202)
T 3gha_A 85 ASEEVWKEDPD-----SFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFA---SQVEKDSDLN 156 (202)
T ss_dssp HHHHHHHHCGG-----GHHHHHHHHHHHCCSSSSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHTTTH---HHHHHHHHHH
T ss_pred HHHHHHhhCHH-----HHHHHHHHHHHhCccccccccCHHHHHHHHHHhcCCCHHHHHHHHhChHHH---HHHHHHHHHH
Confidence 34566665545 7999988765442211111 122323446677 899999999999765331 2223333222
Q ss_pred cCCCCCCceeecceeeeeccccCCccc
Q 006787 371 VGRGSRGDVTILPTLVINDVQYRGKLE 397 (631)
Q Consensus 371 ~~~~~~~~v~~~P~l~iN~~~y~G~l~ 397 (631)
.. .+|...|+++||+..+.|...
T Consensus 157 ~~----~gV~gtPtfvvnG~~~~G~~~ 179 (202)
T 3gha_A 157 QK----MNIQATPTIYVNDKVIKNFAD 179 (202)
T ss_dssp HH----TTCCSSCEEEETTEECSCTTC
T ss_pred HH----cCCCcCCEEEECCEEecCCCC
Confidence 22 347889999999998877544
No 133
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=85.65 E-value=0.65 Score=49.31 Aligned_cols=86 Identities=23% Similarity=0.439 Sum_probs=25.6
Q ss_pred CceeeCCCceeeecCCCCCeeeeCCCccceeecCCCcccCCCCCCCCCCCCCCcccc-ceeCC-Cceee-CCCCcccCCC
Q 006787 444 TACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSA-CSESQ-ITGCH-CPKGFRGDGH 520 (631)
Q Consensus 444 ~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~-C~~~~-~~~C~-C~~Gy~g~~~ 520 (631)
..|....+++.|.|+. ++.|.. |+. |...-. ...+++| .. +.... .+.|. |.-++.|+
T Consensus 304 s~C~~~~g~~~C~C~~----~ttG~~---CE~-----C~pgy~--~~P~~~g---t~~p~~~g~~~~C~pC~Cn~~g~-- 364 (426)
T 3zyj_B 304 TVCVYDNSKLTCECEH----NTTGPD---CGK-----CKKNYQ--GRPWSPG---SYLPIPKGAANACIPSISSIGTN-- 364 (426)
T ss_dssp SCEEEETTEEEECCCT----TEESSS---SCE-----ECTTCC--SSCCCCC---BCCSSSSCBCCCCCCCCC-------
T ss_pred hhcCCCCCCceeeCCC----CCcCCC---ccc-----cccccc--cCcccCC---cccccCCCCCCcccCCCCCCCcC--
Confidence 4677777789999999 666665 643 433211 1111111 10 11122 44453 33333332
Q ss_pred ccccCcCccCC-CCCCCCCCeeeecCCCeEEecCCCCee
Q 006787 521 KCEDINECKER-SACQCDGCSCQNTWGGFECKCKGNLLF 558 (631)
Q Consensus 521 ~C~dideC~~~-~~C~~~~~~C~nt~Gsy~C~C~~G~~~ 558 (631)
.|. .. ++|. ++++|.+.. +|.|++||.+
T Consensus 365 ~CD------~~t~~C~-ngg~C~~~~---~C~C~~G~~G 393 (426)
T 3zyj_B 365 VCD------NELLHCQ-NGGTCHNNV---RCLCPAAYTG 393 (426)
T ss_dssp ---------------------------------------
T ss_pred ccc------cCcccCC-CCCCcCCCC---CCcCCCCCcC
Confidence 443 22 4888 888998765 8999999964
No 134
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=85.49 E-value=0.37 Score=53.52 Aligned_cols=37 Identities=27% Similarity=0.749 Sum_probs=29.5
Q ss_pred cccccccccCCCcccCCCCCceee-CCCceeeecC-CCCCeeeeCCCccceee
Q 006787 425 TNECLERNGGCWQDTQANITACKD-TFRGRLCECP-IVKGVQYRGDGYISCQA 475 (631)
Q Consensus 425 ~deC~~~~~~C~~~~~~~~~~C~~-~~g~~~C~C~-~~~G~~~~gdg~~~C~~ 475 (631)
+|+|.++| |. |++.|.+ ..++|.|.|+ + +|.|.. |+.
T Consensus 1 vd~C~s~P--C~-----ngG~C~~~~~~~y~C~C~~~----G~~G~~---Ce~ 39 (587)
T 3nt1_A 1 ANPCCSNP--CQ-----NRGECMSTGFDQYKCDCTRT----GFYGEN---CTT 39 (587)
T ss_dssp CCTTTTCC--CC-----TTCEEEEEETTEEEEECTTS----SEETTT---TCE
T ss_pred CCCCCCCC--CC-----CCCEeeCCCCCCeEEecCCC----CccCCC---CCC
Confidence 46898877 99 8899996 5689999999 8 556554 875
No 135
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=85.48 E-value=11 Score=34.51 Aligned_cols=149 Identities=14% Similarity=0.153 Sum_probs=79.9
Q ss_pred CCCceeEEeeccCCcccccchhhHHHHHHHHH-HHHHHHHcCCceeEEEEEEEecCcchhccccccccccccCCccCCCC
Q 006787 195 PDQRVEYELWTNSNDECGIRCDEQMNFVKNFK-GHAQILERGGYTLFTPHYITWYCPRAFILSSQCKSQCINHGRYCAPD 273 (631)
Q Consensus 195 ~~~~v~~~~w~~~~d~~~~~~~~~~~f~~~f~-~~~~~l~~~~~~~f~phy~~~~c~~~~~~~~~~~~~Ci~~GrYC~~d 273 (631)
++.++...+|++.. |---+.|-+.+. .+.+.+.+.+.+.|.-+...+ .
T Consensus 9 ~~a~~~i~~f~D~~------Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~~p~-----------------~-------- 57 (186)
T 3bci_A 9 KNGKPLVVVYGDYK------CPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAF-----------------L-------- 57 (186)
T ss_dssp --CCCEEEEEECTT------CHHHHHHHHHHHHHHHHHTTTTTSSEEEEEECCC-----------------S--------
T ss_pred CCCCeEEEEEECCC------ChhHHHHHHHHHHHHHHHhccCCeEEEEEEecCc-----------------C--------
Confidence 46778888888884 335566666653 333344323445554433211 0
Q ss_pred CCCCCCCCCCcchhHHHHHhhhhhhhhccccCCCcchhhhHHHHhhhcCCccc-cchhhhHHHHHHhcCCChhh---hcc
Q 006787 274 PEQDFGEGYQGKDVVFENLRQLCVHRVANESNRSWVWWDYVTDFHIRCSMKEK-RYSKECAEEVMKSLDLPIEK---IRK 349 (631)
Q Consensus 274 p~~~~~~~~~G~dvv~e~lrqlCi~~~~~~~~~~~~ww~Y~~~f~~~C~~~~~-~y~~~C~~~v~~~~~~~~~~---v~~ 349 (631)
|.+...-..--+|++++..+ ++|+|...+-..=..... ....+=...+.+.+|++.++ +.+
T Consensus 58 ----------~~~s~~aa~a~~~a~~~~~~-----~~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~ 122 (186)
T 3bci_A 58 ----------GKDSIVGSRASHAVLMYAPK-----SFLDFQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIK 122 (186)
T ss_dssp ----------CTTHHHHHHHHHHHHHHCGG-----GHHHHHHHHHHTCCCTTSCCCCHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred ----------CcchHHHHHHHHHHHHhCHH-----HHHHHHHHHHhcCcccCCCCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 11222223334566655433 689988765443211111 12233344577889999998 999
Q ss_pred cc--CCCcchhhchHHHHHHHHhcCCCCCCceeecceeeeeccccCCcc
Q 006787 350 CI--GDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVINDVQYRGKL 396 (631)
Q Consensus 350 C~--~d~~~~~~n~iL~~e~~~~~~~~~~~~v~~~P~l~iN~~~y~G~l 396 (631)
|+ .+... .. .++.....-.. .+|...|+++||+..+.|..
T Consensus 123 ~~~~~~~~~--~~-~v~~~~~~a~~----~gv~GtPt~vvnG~~~~G~~ 164 (186)
T 3bci_A 123 DYKTKDSKS--WK-AAEKDKKIAKD----NHIKTTPTAFINGEKVEDPY 164 (186)
T ss_dssp HHHSTTCHH--HH-HHHHHHHHHHH----TTCCSSSEEEETTEECSCTT
T ss_pred HHHhcCHHH--HH-HHHHHHHHHHH----cCCCCCCeEEECCEEcCCCC
Confidence 98 54422 12 23332222211 34788999999998777654
No 136
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=85.22 E-value=0.44 Score=52.38 Aligned_cols=48 Identities=27% Similarity=0.385 Sum_probs=30.8
Q ss_pred Ccee-eCCCCcccCCCccccCcCccCCCCCCCCCCeeeec----CCCeEEecCCCCe
Q 006787 506 ITGC-HCPKGFRGDGHKCEDINECKERSACQCDGCSCQNT----WGGFECKCKGNLL 557 (631)
Q Consensus 506 ~~~C-~C~~Gy~g~~~~C~dideC~~~~~C~~~~~~C~nt----~Gsy~C~C~~G~~ 557 (631)
++.| .|++||.|. .|.+.+.|... +|. ++++|.+. ..++.|.|++||.
T Consensus 417 G~~C~~C~~Gy~G~--~c~~~~~C~~C-~C~-~~gtc~~~~~Cd~~tg~C~C~~g~~ 469 (525)
T 4aqs_A 417 GERCDVCKEGFYDL--SAEDPYGCKSC-ACN-PLGTIPGGNPCDSETGYCYCKRLVT 469 (525)
T ss_dssp TTTTCEECTTEECC--CTTSTTSSEEC-CCC-TTTBCCSSCCBCTTTCCBCBCTTCC
T ss_pred CCcccCCCCCCcCC--CCCCCCCCccC-CCC-CCceecCCCcccCCCCEEECCCCCc
Confidence 5666 588888775 56666667653 454 44444432 2456799999995
No 137
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=85.10 E-value=1.1 Score=36.76 Aligned_cols=58 Identities=24% Similarity=0.519 Sum_probs=47.6
Q ss_pred ccceeCC--CceeeCCCCcccCCCccccCc--CccCC-CCCCCCCCeeeecC-CCeEEecCCCCe
Q 006787 499 SACSESQ--ITGCHCPKGFRGDGHKCEDIN--ECKER-SACQCDGCSCQNTW-GGFECKCKGNLL 557 (631)
Q Consensus 499 ~~C~~~~--~~~C~C~~Gy~g~~~~C~did--eC~~~-~~C~~~~~~C~nt~-Gsy~C~C~~G~~ 557 (631)
+.|.... .-.|+|..||.-++..|..-+ .|..+ +.|. +++.|.... ..-.|.|...+.
T Consensus 16 A~Cyr~~dg~EecRCllnykk~~~kCV~~~~~~C~~NNGGCd-~nA~C~~~~~~kIvC~C~~~~~ 79 (95)
T 1b9w_A 16 AACYRYLDGTEEWRCLLYFKEDAGKCVPAPNMTCKDKNGGCA-PEAECKMNDKNEIVCKCTKEGS 79 (95)
T ss_dssp EEEEECTTSCEEEEECTTEEEETTEEEECTTCCTTTGGGGSC-TTSEEEECTTSCEEEECCSTTE
T ss_pred cCeEEEcCCCEEEEEECCeEecCCEEEcCCCCCccccCCCcC-CCcceeecCCCcEEEECCCCCC
Confidence 7788765 678999999997777898544 69885 7899 999998887 788999998863
No 138
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=84.87 E-value=0.36 Score=43.57 Aligned_cols=35 Identities=23% Similarity=0.647 Sum_probs=28.2
Q ss_pred cCccCCCCCCCCCCeeeecCCCeEEecCCCCeecCCCCcee
Q 006787 526 NECKERSACQCDGCSCQNTWGGFECKCKGNLLFIKEQDACI 566 (631)
Q Consensus 526 deC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C~ 566 (631)
++|... ||. +++.|.+..++|.|.|.+||. |..|+
T Consensus 120 ~~~~~~-pc~-~~g~C~~~~~~~~c~C~~g~~----g~~Ce 154 (157)
T 1g1t_A 120 AACTNT-SCS-GHGECVETINNYTCKCDPGFS----GLKCE 154 (157)
T ss_dssp CCCCTT-GGG-GSEEEEEETTEEEEEECTTEE----STTSC
T ss_pred CCCCCC-CCC-CCCEeecCCCCeeEECCCCcc----Ccccc
Confidence 345554 888 779999999999999999995 55675
No 139
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=84.31 E-value=0.46 Score=43.29 Aligned_cols=30 Identities=23% Similarity=0.571 Sum_probs=23.1
Q ss_pred ccceeCC-CceeeCCCCcccCCCccccCcCccC
Q 006787 499 SACSESQ-ITGCHCPKGFRGDGHKCEDINECKE 530 (631)
Q Consensus 499 ~~C~~~~-~~~C~C~~Gy~g~~~~C~dideC~~ 530 (631)
+.|.+.. +|.|.|.+||.|+ .|+.+.+|..
T Consensus 131 g~C~~~~~~~~c~C~~g~~g~--~C~~~~~c~~ 161 (164)
T 3cfw_A 131 GECVEIINNYTCNCDVGYYGP--QCQFVQVDPR 161 (164)
T ss_dssp EEEEEETTEEEEEECTTCBSS--SSCBC-----
T ss_pred CeecccCCCceeeeCCCcccc--cccccccCcc
Confidence 7899888 9999999999998 8998888853
No 140
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=82.83 E-value=0.75 Score=46.17 Aligned_cols=40 Identities=25% Similarity=0.846 Sum_probs=32.1
Q ss_pred cCcCccCC----CCCCCCCCeeeecCCCeEEecCCCCeecCCCCcee
Q 006787 524 DINECKER----SACQCDGCSCQNTWGGFECKCKGNLLFIKEQDACI 566 (631)
Q Consensus 524 dideC~~~----~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C~ 566 (631)
+.++|... ..|. +.|.|+.|+|.|.|.+||.+..++..|.
T Consensus 119 ~~~~C~~~~~~~~~c~---~~C~n~~g~~~csC~~Gy~L~~d~~~C~ 162 (286)
T 1nt0_A 119 DVDECRTSLGDSVPCD---HYCHXYLGGYYCSCRVGYILHQNKHTCS 162 (286)
T ss_dssp ECCTTC-------CCS---SEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred cCCccCCCCCCcccCC---CccccccCceEeecCCCceeccCCCCcc
Confidence 55677652 2587 7999999999999999999998888775
No 141
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=82.73 E-value=0.9 Score=45.27 Aligned_cols=41 Identities=34% Similarity=0.876 Sum_probs=33.7
Q ss_pred cCcCccCC----CCCCCCCCeeeecCCCeEEecCCCCeecCCCCceee
Q 006787 524 DINECKER----SACQCDGCSCQNTWGGFECKCKGNLLFIKEQDACIE 567 (631)
Q Consensus 524 dideC~~~----~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C~~ 567 (631)
+.++|... ..|. +.|.|+.|+|.|.|.+||.+..+...|..
T Consensus 120 ~~~~C~~~~~~~~~c~---~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~ 164 (278)
T 3dem_A 120 DVDECKEREDEELSCD---HYCHNYIGGYYCSCRFGYILHTDNRTCRV 164 (278)
T ss_dssp ECCTTTC-----CCCS---SEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred ccccCCCCCCCcccCC---cCcCCccCCcEEEeCCcceeccCCCCCcc
Confidence 56778653 3687 78999999999999999999988888863
No 142
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=81.90 E-value=0.6 Score=34.05 Aligned_cols=27 Identities=30% Similarity=0.647 Sum_probs=20.9
Q ss_pred CCCceee----CCCceeeecCCCCCeeeeCCCccceee
Q 006787 442 NITACKD----TFRGRLCECPIVKGVQYRGDGYISCQA 475 (631)
Q Consensus 442 ~~~~C~~----~~g~~~C~C~~~~G~~~~gdg~~~C~~ 475 (631)
|+++|++ ..++|.|.|++ +|.|.. |+.
T Consensus 18 NGGtC~~~~~~~~~~y~C~C~~----Gf~G~~---Ce~ 48 (52)
T 3ca7_A 18 NDAHCFAVKIADLPVYSCECAI----GFMGQR---CEY 48 (52)
T ss_dssp TTCEEEEEEETTEEEEEEECCT----TEESTT---SCE
T ss_pred CCCEEecCccCCCCCEEEECCC----CCcCCC---Ccc
Confidence 7899996 45689999999 566655 764
No 143
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=81.77 E-value=1.1 Score=47.52 Aligned_cols=36 Identities=28% Similarity=0.845 Sum_probs=29.6
Q ss_pred CcCccCCCCCCCCCCeeeecCCCeEEecCC-CCeecCCCCcee
Q 006787 525 INECKERSACQCDGCSCQNTWGGFECKCKG-NLLFIKEQDACI 566 (631)
Q Consensus 525 ideC~~~~~C~~~~~~C~nt~Gsy~C~C~~-G~~~~~d~~~C~ 566 (631)
.++|..+ ||. ++++|++.+++|.|.|+. ||. |..|.
T Consensus 185 ~~~C~~~-pC~-n~g~C~~~~~~~~C~C~~~~~~----G~~C~ 221 (410)
T 3asi_A 185 STTCQED-SCS-NQGVCLQQWDGFSCDCSMTSFS----GPLCN 221 (410)
T ss_dssp SSCCCTT-SSS-TTCEEEECSSSEEEECTTTSEE----STTSC
T ss_pred CCCcccc-cCC-CCCEecCCCCCceEeccCCccc----CCCCC
Confidence 4678776 999 999999999999999996 884 44564
No 144
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=81.60 E-value=0.48 Score=43.18 Aligned_cols=32 Identities=22% Similarity=0.517 Sum_probs=23.5
Q ss_pred CCCceeeCCCceeeecCCCCCeeeeCCCccceeecCCCccc
Q 006787 442 NITACKDTFRGRLCECPIVKGVQYRGDGYISCQAYGPARCS 482 (631)
Q Consensus 442 ~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~ 482 (631)
+++.|.+..++|.|.|++ +|.|+. |+.+ .+|.
T Consensus 129 ~~g~C~~~~~~~~c~C~~----g~~g~~---C~~~--~~c~ 160 (164)
T 3cfw_A 129 GHGECVEIINNYTCNCDV----GYYGPQ---CQFV--QVDP 160 (164)
T ss_dssp SSEEEEEETTEEEEEECT----TCBSSS---SCBC------
T ss_pred CCCeecccCCCceeeeCC----Cccccc---cccc--ccCc
Confidence 679999999999999999 456665 9875 6664
No 145
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=81.25 E-value=3.6 Score=33.65 Aligned_cols=63 Identities=21% Similarity=0.402 Sum_probs=48.1
Q ss_pred CCCceeeCC-CceeeecCCCCCeeeeCCCccceeecCCCcccCCCCCCCCCCCCCCccccceeCC--CceeeCCCCcc
Q 006787 442 NITACKDTF-RGRLCECPIVKGVQYRGDGYISCQAYGPARCSINNGGCWSDTKNGLTFSACSESQ--ITGCHCPKGFR 516 (631)
Q Consensus 442 ~~~~C~~~~-g~~~C~C~~~~G~~~~gdg~~~C~~i~~~~C~~~~~~C~~~~~~g~~~~~C~~~~--~~~C~C~~Gy~ 516 (631)
.++.|..-. +.-.|.|.. ||.-. + ..|..-..-.|..++++|... +.|.... --.|.|...+.
T Consensus 14 ~NA~Cyr~~dg~EecRCll--nykk~--~-~kCV~~~~~~C~~NNGGCd~n-------A~C~~~~~~kIvC~C~~~~~ 79 (95)
T 1b9w_A 14 ENAACYRYLDGTEEWRCLL--YFKED--A-GKCVPAPNMTCKDKNGGCAPE-------AECKMNDKNEIVCKCTKEGS 79 (95)
T ss_dssp TTEEEEECTTSCEEEEECT--TEEEE--T-TEEEECTTCCTTTGGGGSCTT-------SEEEECTTSCEEEECCSTTE
T ss_pred CCcCeEEEcCCCEEEEEEC--CeEec--C-CEEEcCCCCCccccCCCcCCC-------cceeecCCCcEEEECCCCCC
Confidence 568998864 567899999 77664 3 459875334799999999987 8898776 67899987754
No 146
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=81.15 E-value=1.4 Score=38.32 Aligned_cols=55 Identities=29% Similarity=0.611 Sum_probs=34.9
Q ss_pred CCCCCccccceeCC---Cc-eeeCCCCcccCCCccc-cCc-CccCCCCCCCCCCeeeecCCCeEEecCCCCeecCCCCce
Q 006787 492 TKNGLTFSACSESQ---IT-GCHCPKGFRGDGHKCE-DIN-ECKERSACQCDGCSCQNTWGGFECKCKGNLLFIKEQDAC 565 (631)
Q Consensus 492 ~~~g~~~~~C~~~~---~~-~C~C~~Gy~g~~~~C~-did-eC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C 565 (631)
|.|| ++|++.. +| .|.|++||.|. .|+ +++ +|... ...+|++.|..++ .|..|
T Consensus 3 C~ng---gtC~~~~~~~~~~~C~Cp~g~~G~--~Ce~~~~~~C~~g------------~G~~YrG~~~~t~----sG~~C 61 (122)
T 2fd6_A 3 CLNG---GTCVSNKYFSNIHWCNCPKKFGGQ--HCEIDKSKTCYEG------------NGHFYRGKASTDT----MGRPC 61 (122)
T ss_dssp CCSS---CEEEECTTTTTCEEEECCTTEEST--TSCEESSCCSBCS------------SCTTCCSCCCBBT----TSCBB
T ss_pred CCCc---CCcCCCcccCCCCCccCCCCCCCc--cccccCcCCCccc------------ccccceeeccccc----cCCcc
Confidence 5566 7798873 55 99999999986 776 333 33221 1235777776655 35667
Q ss_pred ee
Q 006787 566 IE 567 (631)
Q Consensus 566 ~~ 567 (631)
..
T Consensus 62 q~ 63 (122)
T 2fd6_A 62 LP 63 (122)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 147
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=78.94 E-value=2.5 Score=30.61 Aligned_cols=38 Identities=21% Similarity=0.621 Sum_probs=26.5
Q ss_pred ccCcCccCC--CCCCCCCCeee--ecCCCeEEecCCCCeecCCCCcee
Q 006787 523 EDINECKER--SACQCDGCSCQ--NTWGGFECKCKGNLLFIKEQDACI 566 (631)
Q Consensus 523 ~dideC~~~--~~C~~~~~~C~--nt~Gsy~C~C~~G~~~~~d~~~C~ 566 (631)
...++|... +.|. + ++|. ...+.+.|.|+.||. |..|.
T Consensus 7 ~~~~~C~~~~~~yC~-n-G~C~~i~~~~~~~C~C~~gy~----G~RCe 48 (50)
T 2rnl_A 7 GKKNPCNAEFQNFCI-H-GECKYIEHLEAVTCKCQQEYF----GERCG 48 (50)
T ss_dssp SCCCTTTTTGGGTCS-S-SEEEEETTTTEEEEECCSSCC----SSSCC
T ss_pred CcCcccCchhhCcCC-C-CEEEEecCCCCeeEECCCCcc----ccccc
Confidence 345667652 4787 4 5997 556789999999995 44554
No 148
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=76.28 E-value=3.3 Score=35.93 Aligned_cols=27 Identities=26% Similarity=0.703 Sum_probs=20.4
Q ss_pred CCCceeeCC--Cce-eeecCCCCCeeeeCCCccceee
Q 006787 442 NITACKDTF--RGR-LCECPIVKGVQYRGDGYISCQA 475 (631)
Q Consensus 442 ~~~~C~~~~--g~~-~C~C~~~~G~~~~gdg~~~C~~ 475 (631)
|+++|.+.. .+| +|.|++ +|.|.. |+.
T Consensus 5 nggtC~~~~~~~~~~~C~Cp~----g~~G~~---Ce~ 34 (122)
T 2fd6_A 5 NGGTCVSNKYFSNIHWCNCPK----KFGGQH---CEI 34 (122)
T ss_dssp SSCEEEECTTTTTCEEEECCT----TEESTT---SCE
T ss_pred CcCCcCCCcccCCCCCccCCC----CCCCcc---ccc
Confidence 889999874 566 999999 555544 875
No 149
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=74.96 E-value=1.5 Score=35.08 Aligned_cols=37 Identities=19% Similarity=0.586 Sum_probs=24.1
Q ss_pred cCcCccCC--CCCCCCCCeee--ecCCCeEEecCCCCeecCCCCcee
Q 006787 524 DINECKER--SACQCDGCSCQ--NTWGGFECKCKGNLLFIKEQDACI 566 (631)
Q Consensus 524 dideC~~~--~~C~~~~~~C~--nt~Gsy~C~C~~G~~~~~d~~~C~ 566 (631)
..++|... +.|. ++ +|. +..+.+.|.|++||. |..|.
T Consensus 36 ~~~pC~~~~~~yCl-nG-~C~~i~~~~~~~C~C~~GYt----G~RCE 76 (79)
T 1xdt_R 36 KRDPCLRKYKDFCI-HG-ECKYVKELRAPSCICHPGYH----GERCH 76 (79)
T ss_dssp ---CTTTTTTTCCS-SE-EECCBGGGTBCCEEECTTEE----STTCC
T ss_pred cCCCCCccccCcCC-CC-EeeeecCCCCeEEEcCCCcc----ccccc
Confidence 34667642 5788 54 894 445789999999995 45564
No 150
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=74.75 E-value=2.6 Score=37.83 Aligned_cols=28 Identities=43% Similarity=0.979 Sum_probs=21.9
Q ss_pred CCCCCCccccceeCC---Cc-eeeCCCCcccCCCccc
Q 006787 491 DTKNGLTFSACSESQ---IT-GCHCPKGFRGDGHKCE 523 (631)
Q Consensus 491 ~~~~g~~~~~C~~~~---~~-~C~C~~Gy~g~~~~C~ 523 (631)
.|.|| ++|+... .+ .|.|++||.|. .|+
T Consensus 14 pC~NG---GtC~~~~~~s~~~~C~Cp~g~~G~--~Ce 45 (145)
T 2i9a_A 14 DCLNG---GTCVSNKYFSNIHWCNCPKKFGGQ--HCE 45 (145)
T ss_dssp CCCTT---CEEEECSSSTTCEEEECCTTEEST--TSC
T ss_pred CCCCC---CCcCCCccccCCccccCCCCCCCC--cee
Confidence 37777 7798763 55 89999999986 776
No 151
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=74.61 E-value=1.2 Score=33.37 Aligned_cols=30 Identities=30% Similarity=0.688 Sum_probs=22.7
Q ss_pred CCcccCCCCCcee--e--CCCceeeecCCCCCeeeeCCCccceeec
Q 006787 435 CWQDTQANITACK--D--TFRGRLCECPIVKGVQYRGDGYISCQAY 476 (631)
Q Consensus 435 C~~~~~~~~~~C~--~--~~g~~~C~C~~~~G~~~~gdg~~~C~~i 476 (631)
|. |+++|. + ..++|.|.|++ +|.|.. |+..
T Consensus 16 C~-----NGGtC~~~~~~~~~~~~C~C~~----Gf~G~~---Ce~~ 49 (58)
T 3ltf_D 16 CL-----NDAHCFAVKIADLPVYSCECAI----GFMGQR---CEYK 49 (58)
T ss_dssp SC-----SSCEEEEEEETTEEEEEEEECT----TEESSS---SCEE
T ss_pred CC-----CCCEEeCCccCCCCCEEeECCC----CCccCC---Cccc
Confidence 87 889998 3 45679999999 566655 8754
No 152
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=74.30 E-value=1.1 Score=40.30 Aligned_cols=37 Identities=24% Similarity=0.651 Sum_probs=28.1
Q ss_pred cccccccccCCCcccCCCCCceeeCCCceeeecCCCCCeeeeCCCccceee
Q 006787 425 TNECLERNGGCWQDTQANITACKDTFRGRLCECPIVKGVQYRGDGYISCQA 475 (631)
Q Consensus 425 ~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~ 475 (631)
.++|...+ |. +++.|.+..++|.|.|.+ +|.|+. |+.
T Consensus 119 ~~~~~~~p--c~-----~~g~C~~~~~~~~c~C~~----g~~g~~---Ce~ 155 (157)
T 1g1t_A 119 TAACTNTS--CS-----GHGECVETINNYTCKCDP----GFSGLK---CEQ 155 (157)
T ss_dssp ECCCCTTG--GG-----GSEEEEEETTEEEEEECT----TEESTT---SCE
T ss_pred cCCCCCCC--CC-----CCCEeecCCCCeeEECCC----CccCcc---ccc
Confidence 45665544 77 668999999999999999 556665 764
No 153
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=70.25 E-value=3.1 Score=39.99 Aligned_cols=48 Identities=23% Similarity=0.592 Sum_probs=34.3
Q ss_pred ccceeCCCceeeCCCCcccCCCccc-cCc---------CccC---CCCCCCCCCeeeecCCCeEEecCCCC
Q 006787 499 SACSESQITGCHCPKGFRGDGHKCE-DIN---------ECKE---RSACQCDGCSCQNTWGGFECKCKGNL 556 (631)
Q Consensus 499 ~~C~~~~~~~C~C~~Gy~g~~~~C~-did---------eC~~---~~~C~~~~~~C~nt~Gsy~C~C~~G~ 556 (631)
+.|.. ..|.|.+||.|. .|+ +++ .|.. ..+|. ++++|++ ..|.|.+||
T Consensus 102 G~C~~---g~C~C~~G~~G~--~Cec~~~~~~~~~~~~~C~~~~~~~~Cs-g~G~C~~----g~C~C~~gw 162 (217)
T 2p28_B 102 GFLEC---GICRCDTGYIGK--NCECQTQGRSSQELEGSCRKDNNSIICS-GLGDCVC----GQCLCHTSD 162 (217)
T ss_dssp EEEET---TEEEECTTEEST--TSCEECCCCC-GGGGGGGBSSTTSCBGG-GTEEEET----TEEEECCCC
T ss_pred ceEEC---CEEECCCCccCC--cccccCcccccccCCCcCCCCCCCCCCC-CCCEEeC----CceECCCCC
Confidence 45553 589999999987 665 222 3653 24788 7789985 379999995
No 154
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=68.30 E-value=2.7 Score=30.43 Aligned_cols=30 Identities=17% Similarity=0.428 Sum_probs=22.6
Q ss_pred CCCCCCCCeee--ecCCCeEEecCCCCeecCCCCceee
Q 006787 532 SACQCDGCSCQ--NTWGGFECKCKGNLLFIKEQDACIE 567 (631)
Q Consensus 532 ~~C~~~~~~C~--nt~Gsy~C~C~~G~~~~~d~~~C~~ 567 (631)
+.|. + ++|. +..+.+.|.|++||. |..|.-
T Consensus 14 ~yC~-n-G~C~~~~~~~~~~C~C~~gy~----G~RCe~ 45 (50)
T 1iox_A 14 HYCI-K-GRCRFVVAEQTPSCVCDEGYI----GARCER 45 (50)
T ss_dssp TSCT-T-CCEEEETTTTEEEECCCTTEE----TTTTCE
T ss_pred Cccc-C-CEEEeEcCCCCeEEECCCCcc----cCCCCe
Confidence 4787 5 7895 556789999999995 556654
No 155
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=67.99 E-value=3.8 Score=29.62 Aligned_cols=30 Identities=20% Similarity=0.533 Sum_probs=22.2
Q ss_pred CCCCCCCCeeee--cCCCeEEecCCCCeecCCCCceee
Q 006787 532 SACQCDGCSCQN--TWGGFECKCKGNLLFIKEQDACIE 567 (631)
Q Consensus 532 ~~C~~~~~~C~n--t~Gsy~C~C~~G~~~~~d~~~C~~ 567 (631)
+.|. ++ +|.. ..+.+.|.|++||. |..|.-
T Consensus 14 ~yC~-nG-~C~~~~~~~~~~C~C~~gy~----G~RCe~ 45 (50)
T 3e50_C 14 QFCF-HG-TCRFLVQEDKPACVCHSGYV----GARCEH 45 (50)
T ss_pred Cccc-CC-EEeeccCCCCeEEECCCCCc----ccCCCc
Confidence 5788 55 9975 34789999999995 555653
No 156
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=65.87 E-value=72 Score=28.26 Aligned_cols=78 Identities=12% Similarity=0.167 Sum_probs=49.1
Q ss_pred chhhhHHHHhhhcCCccccchhhhHHHHHHhcCCChhhhccccCCCcchhhchHHHHHHHHhcCCCCCCceeecceeeee
Q 006787 309 VWWDYVTDFHIRCSMKEKRYSKECAEEVMKSLDLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVIN 388 (631)
Q Consensus 309 ~ww~Y~~~f~~~C~~~~~~y~~~C~~~v~~~~~~~~~~v~~C~~d~~~~~~n~iL~~e~~~~~~~~~~~~v~~~P~l~iN 388 (631)
++|.|...+-.. ......+=...+...+|++.+++.+|+.+... ...++.....-.. .+|...|+++||
T Consensus 83 ~~~~~~~~lf~~----~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~---~~~v~~~~~~a~~----~gv~gtPt~~i~ 151 (175)
T 3gyk_A 83 KYEAFHWALMGM----SGKANETGVLRIAREVGLDTEQLQRDMEAPEV---TAHIAQSMALAQK----LGFNGTPSFVVE 151 (175)
T ss_dssp CHHHHHHHHHTC----SSCCSHHHHHHHHHHTTCCHHHHHHHTTCHHH---HHHHHHHHHHHHH----HTCCSSSEEEET
T ss_pred HHHHHHHHHHhc----CCCCCHHHHHHHHHHcCCCHHHHHHHHhChHH---HHHHHHHHHHHHH----cCCccCCEEEEC
Confidence 578887766442 12333344455888999999999999986532 1222332222111 236789999999
Q ss_pred ccccCCccc
Q 006787 389 DVQYRGKLE 397 (631)
Q Consensus 389 ~~~y~G~l~ 397 (631)
+..+.|...
T Consensus 152 g~~~~G~~~ 160 (175)
T 3gyk_A 152 DALVPGFVE 160 (175)
T ss_dssp TEEECSCCC
T ss_pred CEEeeCCCC
Confidence 988877654
No 157
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=63.68 E-value=4.3 Score=49.43 Aligned_cols=40 Identities=30% Similarity=0.891 Sum_probs=31.8
Q ss_pred ccc-cCcCccCCCCCCCCCCeeeecCCCeEEecC-CCCeecCCCCcee
Q 006787 521 KCE-DINECKERSACQCDGCSCQNTWGGFECKCK-GNLLFIKEQDACI 566 (631)
Q Consensus 521 ~C~-dideC~~~~~C~~~~~~C~nt~Gsy~C~C~-~G~~~~~d~~~C~ 566 (631)
.|. ..+.|..+ ||. ++++|...+.+|.|.|+ +||. |..|.
T Consensus 1012 gC~~~~~~C~~~-pC~-ngG~C~~~~~~~~C~C~~~g~~----G~~C~ 1053 (1245)
T 3qcw_A 1012 GCEGPSTTCQED-SCS-NQGVCLQQWDGFSCDCSMTSFS----GPLCN 1053 (1245)
T ss_dssp SSSCCCCCCCTT-SSS-SSCEEEEETTEEEEECTTSSCB----STTSC
T ss_pred eeecccCceECC-cCC-CCCEeCCCCCCCEEECCCCCCC----CCCcc
Confidence 354 34678876 999 99999999999999999 5985 45554
No 158
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=63.04 E-value=4.9 Score=43.65 Aligned_cols=41 Identities=20% Similarity=0.413 Sum_probs=30.3
Q ss_pred cCcCccCC--CCCCCCCCeeeecC-CCeEEecCCCCeecCCCCceee
Q 006787 524 DINECKER--SACQCDGCSCQNTW-GGFECKCKGNLLFIKEQDACIE 567 (631)
Q Consensus 524 dideC~~~--~~C~~~~~~C~nt~-Gsy~C~C~~G~~~~~d~~~C~~ 567 (631)
.++.|... ++|+ .++.|+++. |+|.|.|+.||. +++..|..
T Consensus 17 ~~~~c~~~~~~~c~-~~a~C~~~~~~~~~c~C~~G~a--g~G~~c~~ 60 (551)
T 3fby_A 17 AQRFCPDGSPSECH-EHADCVLERDGSRSCVCAVGWA--GNGILCGR 60 (551)
T ss_dssp BCCBCTTSSBCCCC-TTEEEEECTTSCEEEEECTTEE--SSSSSCEE
T ss_pred ccccCCCCCCCCCC-CCCeeEeCCCCCEecCCCCCCC--CCCcccCc
Confidence 34556553 5899 899998874 789999999995 45666753
No 159
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=61.00 E-value=4 Score=29.52 Aligned_cols=24 Identities=29% Similarity=0.782 Sum_probs=17.8
Q ss_pred cceeCC---CceeeCCCCcccCCCccccC
Q 006787 500 ACSESQ---ITGCHCPKGFRGDGHKCEDI 525 (631)
Q Consensus 500 ~C~~~~---~~~C~C~~Gy~g~~~~C~di 525 (631)
+|.... .+.|.|++||.|. .|+-.
T Consensus 20 ~C~~~~~~~~~~C~C~~gy~G~--RCe~~ 46 (50)
T 3e50_C 20 TCRFLVQEDKPACVCHSGYVGA--RCEHA 46 (50)
T ss_pred EEeeccCCCCeEEECCCCCccc--CCCce
Confidence 466432 7899999999998 67643
No 160
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=60.86 E-value=6.8 Score=42.53 Aligned_cols=38 Identities=24% Similarity=0.668 Sum_probs=29.7
Q ss_pred CcccCCC-CCCCCCCCCCCccccceeCC--CceeeCCCCcccCCCccc
Q 006787 479 ARCSINN-GGCWSDTKNGLTFSACSESQ--ITGCHCPKGFRGDGHKCE 523 (631)
Q Consensus 479 ~~C~~~~-~~C~~~~~~g~~~~~C~~~~--~~~C~C~~Gy~g~~~~C~ 523 (631)
+.|.... +.|+.. +.|+.+. .|.|.|+.||.|++..|.
T Consensus 19 ~~c~~~~~~~c~~~-------a~C~~~~~~~~~c~C~~G~ag~G~~c~ 59 (551)
T 3fby_A 19 RFCPDGSPSECHEH-------ADCVLERDGSRSCVCAVGWAGNGILCG 59 (551)
T ss_dssp CBCTTSSBCCCCTT-------EEEEECTTSCEEEEECTTEESSSSSCE
T ss_pred ccCCCCCCCCCCCC-------CeeEeCCCCCEecCCCCCCCCCCcccC
Confidence 3454433 577776 8899987 689999999999998886
No 161
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=59.47 E-value=5.9 Score=41.66 Aligned_cols=37 Identities=27% Similarity=0.757 Sum_probs=28.3
Q ss_pred cccccccccCCCcccCCCCCceeeCCCceeeecC-CCCCeeeeCCCccceee
Q 006787 425 TNECLERNGGCWQDTQANITACKDTFRGRLCECP-IVKGVQYRGDGYISCQA 475 (631)
Q Consensus 425 ~deC~~~~~~C~~~~~~~~~~C~~~~g~~~C~C~-~~~G~~~~gdg~~~C~~ 475 (631)
.++|..++ |. +++.|.+..++|.|.|+ + +|.|.. |+.
T Consensus 185 ~~~C~~~p--C~-----n~g~C~~~~~~~~C~C~~~----~~~G~~---C~~ 222 (410)
T 3asi_A 185 STTCQEDS--CS-----NQGVCLQQWDGFSCDCSMT----SFSGPL---CND 222 (410)
T ss_dssp SSCCCTTS--SS-----TTCEEEECSSSEEEECTTT----SEESTT---SCE
T ss_pred CCCccccc--CC-----CCCEecCCCCCceEeccCC----cccCCC---CCC
Confidence 35776665 88 88999999999999998 4 455544 765
No 162
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=59.17 E-value=5.8 Score=48.25 Aligned_cols=40 Identities=23% Similarity=0.834 Sum_probs=32.1
Q ss_pred ccc--cCcCccCCCCCCCCCCeeeecCCCeEEecC-CCCeecCCCCcee
Q 006787 521 KCE--DINECKERSACQCDGCSCQNTWGGFECKCK-GNLLFIKEQDACI 566 (631)
Q Consensus 521 ~C~--dideC~~~~~C~~~~~~C~nt~Gsy~C~C~-~G~~~~~d~~~C~ 566 (631)
.|. ..+.|.++ ||. +++.|.+.+++|.|.|+ .||. |..|.
T Consensus 613 gC~~~~~~~C~~~-pC~-ngg~C~~~~~~~~C~C~~~g~~----G~~C~ 655 (1245)
T 3qcw_A 613 SCSRETAKPCLSN-PCK-NNGMCRDGWNRYVCDCSGTGYL----GRSCE 655 (1245)
T ss_dssp SCCCCSSCGGGSC-CCC-TTCEEEECSSSEEEECTTTTEE----STTSC
T ss_pred cccccCCCCCCcc-CCC-CCCEEeCCCCCeEEECCCCCcc----cccCc
Confidence 464 35778876 999 99999999999999999 6885 45564
No 163
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=57.40 E-value=8 Score=45.19 Aligned_cols=66 Identities=17% Similarity=0.520 Sum_probs=36.0
Q ss_pred ceeCC-Cceee--CCCCccc-CCCccccCcCccC-CCCCC-CCCCeeeecC-CCeEE--ecCCCCeecCCCCcee
Q 006787 501 CSESQ-ITGCH--CPKGFRG-DGHKCEDINECKE-RSACQ-CDGCSCQNTW-GGFEC--KCKGNLLFIKEQDACI 566 (631)
Q Consensus 501 C~~~~-~~~C~--C~~Gy~g-~~~~C~dideC~~-~~~C~-~~~~~C~nt~-Gsy~C--~C~~G~~~~~d~~~C~ 566 (631)
|.+.. ...|. |++|+.. .+..|...++|.. ..+|. |.+..|.+.. -...| .||.||..+.+...|.
T Consensus 228 C~~~~~~~~Cv~~Cp~~~y~~~~~~C~~~~~C~~~~~~c~~~~~~~c~~~~~~~~~Cv~~CP~g~~~~~~~~~C~ 302 (897)
T 2dtg_E 228 CRNFYLDGRCVETCPPPYYHFQDWRCVNFSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGYTMNSSNLLCT 302 (897)
T ss_dssp CSSCBBTTBCCSSCCSSCCCCTTSBCCCHHHHHHHSSCCCSTTTTSCCCCEEETTEEESSCCSSCEECSSSCBEE
T ss_pred CccCccCCcchhhcCCceeEecCcEEcChhHhhccCccccCCCcccccceeeECCEEccCCCCCccccCCCCeec
Confidence 44444 55564 9988663 3678887777765 22444 1122343322 12346 4999987654443444
No 164
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=57.19 E-value=5.3 Score=42.34 Aligned_cols=36 Identities=31% Similarity=0.840 Sum_probs=0.0
Q ss_pred ccceeCCCceeeCCCCcccCCCccccCcCccCCCCCCCCCCeeeecCC
Q 006787 499 SACSESQITGCHCPKGFRGDGHKCEDINECKERSACQCDGCSCQNTWG 546 (631)
Q Consensus 499 ~~C~~~~~~~C~C~~Gy~g~~~~C~dideC~~~~~C~~~~~~C~nt~G 546 (631)
++|.+.. +|.|++||.|. .|+ .. .|. +++.|....|
T Consensus 377 g~C~~~~--~C~C~~G~~G~--~Ce------~c-~C~-~~g~C~~~~G 412 (426)
T 3zyj_B 377 GTCHNNV--RCLCPAAYTGI--LCE------KL-RCE-EAGSCGSDSG 412 (426)
T ss_dssp ------------------------------------------------
T ss_pred CCcCCCC--CCcCCCCCcCC--CCc------CC-CCC-CCCcccCCCC
Confidence 5676654 89999999997 454 22 455 5566655444
No 165
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=56.70 E-value=6.5 Score=39.17 Aligned_cols=29 Identities=24% Similarity=0.657 Sum_probs=25.6
Q ss_pred CceeeCCCceeeecCCCCCeeeeCCCccceee
Q 006787 444 TACKDTFRGRLCECPIVKGVQYRGDGYISCQA 475 (631)
Q Consensus 444 ~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~ 475 (631)
+.|.++.|+|.|.|.+ ||.+..++ ..|..
T Consensus 135 ~~C~n~~g~~~csC~~--Gy~L~~d~-~~C~~ 163 (286)
T 1nt0_A 135 HYCHXYLGGYYCSCRV--GYILHQNK-HTCSA 163 (286)
T ss_dssp SEEEEETTEEEEECCT--TEEECTTS-SCEEE
T ss_pred CccccccCceEeecCC--CceeccCC-CCccc
Confidence 7899999999999999 99999887 67763
No 166
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=56.11 E-value=5.8 Score=37.00 Aligned_cols=30 Identities=43% Similarity=1.033 Sum_probs=21.9
Q ss_pred CCCCCCCCCCccccceeCCCceeeCCCCcccCCCccc
Q 006787 487 GCWSDTKNGLTFSACSESQITGCHCPKGFRGDGHKCE 523 (631)
Q Consensus 487 ~C~~~~~~g~~~~~C~~~~~~~C~C~~Gy~g~~~~C~ 523 (631)
.|...|.|| +.|+. ...|.|++||.|. .|+
T Consensus 150 ~C~~~C~ng---G~Cv~--P~~C~C~~Gw~G~--~C~ 179 (188)
T 2ygo_A 150 ECPGGCRNG---GFCNE--RRICECPDGFHGP--HCE 179 (188)
T ss_dssp CCTTCCCTT---CEECT--TSCEECCTTCBTT--TTC
T ss_pred ccCCCCCCC---CEeCC--CCcccCcCCCCCC--CCc
Confidence 466666666 66765 4689999999987 554
No 167
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=54.94 E-value=7.2 Score=38.53 Aligned_cols=29 Identities=24% Similarity=0.671 Sum_probs=25.6
Q ss_pred CceeeCCCceeeecCCCCCeeeeCCCccceee
Q 006787 444 TACKDTFRGRLCECPIVKGVQYRGDGYISCQA 475 (631)
Q Consensus 444 ~~C~~~~g~~~C~C~~~~G~~~~gdg~~~C~~ 475 (631)
..|.+..+++.|.|.+ ||.+.++. +.|..
T Consensus 136 ~~C~n~~g~~~C~C~~--Gy~l~~d~-~~C~~ 164 (278)
T 3dem_A 136 HYCHNYIGGYYCSCRF--GYILHTDN-RTCRV 164 (278)
T ss_dssp SEEEEETTEEEEECCT--TCEECTTS-SCEEC
T ss_pred cCcCCccCCcEEEeCC--cceeccCC-CCCcc
Confidence 6799999999999999 99999888 77763
No 168
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=52.35 E-value=5.4 Score=43.76 Aligned_cols=47 Identities=23% Similarity=0.720 Sum_probs=26.1
Q ss_pred eeeCCCCcccCCCccccCcCccCC--------CCCC-CCCCeeeecCCCeEEecCCCCe
Q 006787 508 GCHCPKGFRGDGHKCEDINECKER--------SACQ-CDGCSCQNTWGGFECKCKGNLL 557 (631)
Q Consensus 508 ~C~C~~Gy~g~~~~C~dideC~~~--------~~C~-~~~~~C~nt~Gsy~C~C~~G~~ 557 (631)
+|.|.+||+..+..|+. |..+ ..|. |+...=....|+|.|.|..||-
T Consensus 264 ~C~C~~G~e~~~~~C~a---C~~g~~k~~~~~~~C~~CP~~S~s~~~Gs~~C~C~ng~~ 319 (536)
T 3fl7_A 264 QCLCQAGYEKVEDACQA---CSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFF 319 (536)
T ss_dssp CCEECTTEEEETTEEEE---CCTTEECCSCCSSCCEECCSSEECCCTTCSSCEECTTCB
T ss_pred cEeccCccccCCceeee---cCCCCCcccCCCCccccCCCCCCCCCCCccEEEEecccc
Confidence 56677777654445553 3221 1222 1111213456999999999984
No 169
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=48.06 E-value=7.6 Score=30.91 Aligned_cols=26 Identities=31% Similarity=0.788 Sum_probs=18.0
Q ss_pred CCCcee--eCCCceeeecCCCCCeeeeCCCccceee
Q 006787 442 NITACK--DTFRGRLCECPIVKGVQYRGDGYISCQA 475 (631)
Q Consensus 442 ~~~~C~--~~~g~~~C~C~~~~G~~~~gdg~~~C~~ 475 (631)
++ .|. ...+.+.|.|++ +|.|.. |+.
T Consensus 50 nG-~C~~i~~~~~~~C~C~~----GYtG~R---CE~ 77 (79)
T 1xdt_R 50 HG-ECKYVKELRAPSCICHP----GYHGER---CHG 77 (79)
T ss_dssp SE-EECCBGGGTBCCEEECT----TEESTT---CCE
T ss_pred CC-EeeeecCCCCeEEEcCC----Cccccc---ccc
Confidence 54 784 344678999999 666666 753
No 170
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=40.83 E-value=15 Score=34.28 Aligned_cols=31 Identities=26% Similarity=0.722 Sum_probs=23.1
Q ss_pred CccCCCCCCCCCCeeeecCCCeEEecCCCCeecCCCCceee
Q 006787 527 ECKERSACQCDGCSCQNTWGGFECKCKGNLLFIKEQDACIE 567 (631)
Q Consensus 527 eC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C~~ 567 (631)
.|.. +|. +++.|+. ...|.|++||. |..|..
T Consensus 150 ~C~~--~C~-ngG~Cv~---P~~C~C~~Gw~----G~~C~~ 180 (188)
T 2ygo_A 150 ECPG--GCR-NGGFCNE---RRICECPDGFH----GPHCEG 180 (188)
T ss_dssp CCTT--CCC-TTCEECT---TSCEECCTTCB----TTTTCB
T ss_pred ccCC--CCC-CCCEeCC---CCcccCcCCCC----CCCCcC
Confidence 4553 688 8889974 56899999995 667764
No 171
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=39.62 E-value=10 Score=39.55 Aligned_cols=21 Identities=24% Similarity=0.752 Sum_probs=13.7
Q ss_pred eEE-ecCCCCeecCCCCceeec
Q 006787 548 FEC-KCKGNLLFIKEQDACIER 568 (631)
Q Consensus 548 y~C-~C~~G~~~~~d~~~C~~~ 568 (631)
.+| +|.+||-.......|.+=
T Consensus 346 ~~Ce~C~~Gyyg~~~~~~C~pC 367 (375)
T 4aqt_A 346 AKCERCRENFFRLGNTEACSPA 367 (375)
T ss_dssp TTSCEECSSEECCTTCSSCEEC
T ss_pred CCCCCCCcCcccCcCCCCCcCC
Confidence 346 588888666555667653
No 172
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=39.14 E-value=35 Score=30.35 Aligned_cols=27 Identities=30% Similarity=0.829 Sum_probs=19.9
Q ss_pred CCCceeeC--CCce-eeecCCCCCeeeeCCCccceee
Q 006787 442 NITACKDT--FRGR-LCECPIVKGVQYRGDGYISCQA 475 (631)
Q Consensus 442 ~~~~C~~~--~g~~-~C~C~~~~G~~~~gdg~~~C~~ 475 (631)
|+++|.+. ...+ .|.|++ +|.|.. |+.
T Consensus 17 NGGtC~~~~~~s~~~~C~Cp~----g~~G~~---Cei 46 (145)
T 2i9a_A 17 NGGTCVSNKYFSNIHWCNCPK----KFGGQH---CEI 46 (145)
T ss_dssp TTCEEEECSSSTTCEEEECCT----TEESTT---SCE
T ss_pred CCCCcCCCccccCCccccCCC----CCCCCc---eec
Confidence 88999876 4556 899999 455544 864
No 173
>4b2v_A S64; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=37.14 E-value=15 Score=22.75 Aligned_cols=15 Identities=53% Similarity=1.504 Sum_probs=11.4
Q ss_pred cccccCCccCCCCCCC
Q 006787 261 SQCINHGRYCAPDPEQ 276 (631)
Q Consensus 261 ~~Ci~~GrYC~~dp~~ 276 (631)
+.|+-+|.+| |||+-
T Consensus 1 secvenggfc-pdpek 15 (32)
T 4b2v_A 1 SECVENGGFC-PDPEK 15 (32)
T ss_dssp CCCCCTTCBC-CCTTT
T ss_pred CchhhcCCcC-CChHH
Confidence 3588899998 67764
No 174
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=37.14 E-value=20 Score=25.71 Aligned_cols=27 Identities=22% Similarity=0.536 Sum_probs=19.8
Q ss_pred CCCcee--eCCCceeeecCCCCCeeeeCCCccceeec
Q 006787 442 NITACK--DTFRGRLCECPIVKGVQYRGDGYISCQAY 476 (631)
Q Consensus 442 ~~~~C~--~~~g~~~C~C~~~~G~~~~gdg~~~C~~i 476 (631)
+ +.|. ...+.+.|.|++ +|.|.. |+..
T Consensus 18 n-G~C~~~~~~~~~~C~C~~----gy~G~R---Ce~~ 46 (50)
T 1iox_A 18 K-GRCRFVVAEQTPSCVCDE----GYIGAR---CERV 46 (50)
T ss_dssp T-CCEEEETTTTEEEECCCT----TEETTT---TCEE
T ss_pred C-CEEEeEcCCCCeEEECCC----CcccCC---CCee
Confidence 5 6786 556778999999 667666 7753
No 175
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=36.28 E-value=25 Score=35.95 Aligned_cols=41 Identities=34% Similarity=0.876 Sum_probs=32.1
Q ss_pred cCcCccCC----CCCCCCCCeeeecCCCeEEecCCCCeecCCCCceee
Q 006787 524 DINECKER----SACQCDGCSCQNTWGGFECKCKGNLLFIKEQDACIE 567 (631)
Q Consensus 524 dideC~~~----~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~d~~~C~~ 567 (631)
+.++|... ..|. +.|.|+.|+|.|.|..||.+..+...|..
T Consensus 120 ~~~~c~~~~~~~~~~~---~~c~n~~g~~~csC~~g~~l~~~~~~~~~ 164 (361)
T 4aqb_A 120 DVDECKEREDEELSCD---HYCHNYIGGYYCSCRFGYILHTDNRTCRV 164 (361)
T ss_dssp ECCGGGTGGGSSSCCS---SEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred cccccccccccCCCCC---ccCCccCCCceeccCCCeEEecccccccc
Confidence 45666542 3566 89999999999999999998888777653
No 176
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=33.18 E-value=26 Score=25.18 Aligned_cols=22 Identities=27% Similarity=0.792 Sum_probs=16.9
Q ss_pred Ccee--eCCCceeeecCCCCCeeeeCCC
Q 006787 444 TACK--DTFRGRLCECPIVKGVQYRGDG 469 (631)
Q Consensus 444 ~~C~--~~~g~~~C~C~~~~G~~~~gdg 469 (631)
+.|. ...+.+.|.|++ +|.|+.
T Consensus 23 G~C~~i~~~~~~~C~C~~----gy~G~R 46 (50)
T 2rnl_A 23 GECKYIEHLEAVTCKCQQ----EYFGER 46 (50)
T ss_dssp SEEEEETTTTEEEEECCS----SCCSSS
T ss_pred CEEEEecCCCCeeEECCC----Cccccc
Confidence 5897 556678999999 666665
No 177
>1hx2_A BSTI; beta-sheet disulfide-rich, hydrolase inhibitor; NMR {Bombina bombina} SCOP: g.22.1.2
Probab=32.87 E-value=54 Score=24.05 Aligned_cols=23 Identities=22% Similarity=0.723 Sum_probs=15.8
Q ss_pred CceeeCCCC--cccC-CCccccCcCc
Q 006787 506 ITGCHCPKG--FRGD-GHKCEDINEC 528 (631)
Q Consensus 506 ~~~C~C~~G--y~g~-~~~C~dideC 528 (631)
...|.|++| |.-+ ...|....+|
T Consensus 35 ~~GC~C~~Gtv~v~~~~~~CV~~~~C 60 (60)
T 1hx2_A 35 NQRCGCISGTVLKSKDSSECVHPSKC 60 (60)
T ss_dssp CSEEEECTTCEESSTTCSSEECTTTC
T ss_pred CCCCCCCCCCeeEECCCCCEechhhC
Confidence 346999999 7755 4567766554
No 178
>4f87_A Plycb; lysin, bacteriophage, antimicrobial protein, viral protein; 1.40A {Streptococcus phage C1} PDB: 4f88_A
Probab=30.32 E-value=23 Score=25.82 Aligned_cols=20 Identities=30% Similarity=0.325 Sum_probs=18.3
Q ss_pred CccEEEEeHHHHHHHHHHHH
Q 006787 158 GIPSALIDRAFGLSLKEALK 177 (631)
Q Consensus 158 ~IP~~~I~~~~G~~l~~~l~ 177 (631)
-||++-|+++|-++|+++++
T Consensus 52 iipsinisksdveairkamk 71 (72)
T 4f87_A 52 IIPSINISKSDVEAIRKAMK 71 (72)
T ss_dssp TSCEEECCGGGHHHHHHHHC
T ss_pred hCccccccHhHHHHHHHHhc
Confidence 58999999999999999875
No 179
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=29.89 E-value=8 Score=36.57 Aligned_cols=57 Identities=12% Similarity=0.307 Sum_probs=37.2
Q ss_pred HHHHhcCCChhhhccccCCCcchhhchHHHHHHHHh-cCCCCCCceeecceeeeeccccCCcccc
Q 006787 335 EVMKSLDLPIEKIRKCIGDPEADVENEVLKTEQEFQ-VGRGSRGDVTILPTLVINDVQYRGKLER 398 (631)
Q Consensus 335 ~v~~~~~~~~~~v~~C~~d~~~~~~n~iL~~e~~~~-~~~~~~~~v~~~P~l~iN~~~y~G~l~~ 398 (631)
++...+|+|.+++.+|+.+... ...| +...... .. .+|...|+++||+..+.|....
T Consensus 128 ~~a~~~Gld~~~~~~~l~s~~~--~~~v-~~~~~~a~~~----~GV~GtPtfvvng~~~~G~~~~ 185 (205)
T 3gmf_A 128 DFMAARGMDRSTLDRCLSNEAL--AKKL-AAETDEAINQ----YNVSGTPSFMIDGILLAGTHDW 185 (205)
T ss_dssp HHHHTTTCCHHHHHHHHTCHHH--HHHH-HHHHHHHHHH----HCCCSSSEEEETTEECTTCCSH
T ss_pred HHHHHcCCCHHHHHHHHcCHHH--HHHH-HHHHHHHHHH----cCCccCCEEEECCEEEeCCCCH
Confidence 3566789999999999986532 1222 2222211 11 2367899999999988886543
No 180
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=29.70 E-value=3.5e+02 Score=25.29 Aligned_cols=83 Identities=11% Similarity=0.236 Sum_probs=47.7
Q ss_pred chhhhHHHHhhhcCC--ccccchhhhHHHHHHhcCCChhhhccccCCCcchhhchHHHHHHHHhcCCCCCCceeecceee
Q 006787 309 VWWDYVTDFHIRCSM--KEKRYSKECAEEVMKSLDLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLV 386 (631)
Q Consensus 309 ~ww~Y~~~f~~~C~~--~~~~y~~~C~~~v~~~~~~~~~~v~~C~~d~~~~~~n~iL~~e~~~~~~~~~~~~v~~~P~l~ 386 (631)
+||+|....-..=.. .......+=...+.+.+|++.+++.+|+.+... ...++.....-.. ..+|...|+++
T Consensus 103 ~f~~~~~aLF~~q~~~~~~~~~~~~~L~~iA~~~Gld~~~~~~~l~s~~~---~~~v~~~~~~a~~---~~GV~GtPtfv 176 (226)
T 3f4s_A 103 DYFNFNKAVFNSIDSWNYYNLSDLTLLQRIAALSNLKQDAFNQCINDKKI---MDKIVNDKSLAIN---KLGITAVPIFF 176 (226)
T ss_dssp HHHHHHHHHHHTGGGSCSSSTTCCHHHHHHHHHTTCCHHHHHHHHTCHHH---HHHHHHHHHHHHH---HHCCCSSCEEE
T ss_pred HHHHHHHHHHHhCHhhcccccCcHHHHHHHHHHcCCCHHHHHHHHhCHHH---HHHHHHHHHHHHH---HcCCCcCCEEE
Confidence 688887765432110 000111233344677899999999999986532 1222332322111 02367899999
Q ss_pred e---eccccCCccc
Q 006787 387 I---NDVQYRGKLE 397 (631)
Q Consensus 387 i---N~~~y~G~l~ 397 (631)
| |+..+.|...
T Consensus 177 v~~~nG~~~~Ga~~ 190 (226)
T 3f4s_A 177 IKLNDDKSYIEHNK 190 (226)
T ss_dssp EEECCTTCCCCGGG
T ss_pred EEcCCCEEeeCCCC
Confidence 9 9998877654
No 181
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=25.14 E-value=33 Score=30.68 Aligned_cols=51 Identities=10% Similarity=0.150 Sum_probs=33.9
Q ss_pred HHHHHHhcCCChhhhccccCCCcchhhchHHHHHHHHhcCCCCCCceeecceeeeecc
Q 006787 333 AEEVMKSLDLPIEKIRKCIGDPEADVENEVLKTEQEFQVGRGSRGDVTILPTLVINDV 390 (631)
Q Consensus 333 ~~~v~~~~~~~~~~v~~C~~d~~~~~~n~iL~~e~~~~~~~~~~~~v~~~P~l~iN~~ 390 (631)
...+....|+|.+++++|+.+... ...++.....-. +.+|...|+++|||.
T Consensus 109 l~~~a~~~Gld~~~~~~~~~s~~~---~~~v~~~~~~a~----~~gv~gTPtfiINGk 159 (184)
T 4dvc_A 109 LRQIFLDEGIDAAKFDAAYNGFAV---DSMVHRFDKQFQ----DSGLTGVPAVVVNNR 159 (184)
T ss_dssp HHHHHHTTTCCHHHHHHHHTSHHH---HHHHHHHHHHHH----HHTCCSSSEEEETTT
T ss_pred HHHHHHHhCCCHHHHHHHHhCHHH---HHHHHHHHHHHH----HcCCCcCCEEEECCE
Confidence 445788999999999999986532 222333222211 234788999999986
No 182
>2x5h_A ORF 131; viral protein; 1.80A {Sulfolobus islandicus rudivirus 1} PDB: 2x5g_A* 2x5t_A
Probab=23.94 E-value=90 Score=24.69 Aligned_cols=52 Identities=15% Similarity=0.352 Sum_probs=25.9
Q ss_pred CCEEEEEEEecCCCCCCCCceeEEeeccCCcccccchhhHHHHHHHHHHHHH-HHHcCCceeEEEE
Q 006787 179 GEEVVIKLDWTESMPHPDQRVEYELWTNSNDECGIRCDEQMNFVKNFKGHAQ-ILERGGYTLFTPH 243 (631)
Q Consensus 179 g~~V~v~l~~~~~~p~~~~~v~~~~w~~~~d~~~~~~~~~~~f~~~f~~~~~-~l~~~~~~~f~ph 243 (631)
|..|+++|.+. ..+...-..-.++.|- +++..|.+|..-+. .|.+ |+.|+|.
T Consensus 45 g~~ir~SMTiH-----s~nNfkKQIGiTa~DA------~dL~lIa~FLeKYS~~Lnk--YVkF~~r 97 (97)
T 2x5h_A 45 DGKIRYSMTIH-----SQNNFRKQIGITPQDA------EDLKLIAEFLEKYSDFLNE--YVKFTPR 97 (97)
T ss_dssp TTEEEEEEEEE-----ETTEEEEEEEECGGGH------HHHHHHHHHHHHTHHHHHH--HC-----
T ss_pred CCeeEEEEEEe-----cccchhhhcCCCcccH------HHHHHHHHHHHHHHHHHHH--hhccccC
Confidence 45666666662 1233333344455553 66777777766444 4443 8999884
No 183
>2hr7_A Insulin receptor; hormone receptor, leucine rich repeat, transferase; HET: NAG BMA MAN FUC P33; 2.32A {Homo sapiens}
Probab=22.33 E-value=22 Score=38.41 Aligned_cols=66 Identities=17% Similarity=0.506 Sum_probs=32.9
Q ss_pred ceeCC-Cceee--CCCCccc-CCCccccCcCccCC-CCCC-CCCCeeeecC-CCeEE--ecCCCCeecCCCCcee
Q 006787 501 CSESQ-ITGCH--CPKGFRG-DGHKCEDINECKER-SACQ-CDGCSCQNTW-GGFEC--KCKGNLLFIKEQDACI 566 (631)
Q Consensus 501 C~~~~-~~~C~--C~~Gy~g-~~~~C~dideC~~~-~~C~-~~~~~C~nt~-Gsy~C--~C~~G~~~~~d~~~C~ 566 (631)
|.+.. ...|. ||+||.. ++..|..-++|..- ++|. .....|.+.. -...| .||+||..+.+...|.
T Consensus 228 C~~~~~~g~Cv~~CP~g~y~~~~~~C~~~~~C~~c~~~c~~~~~~sC~~~~~~~~~CV~~CP~g~~~~~~~~~C~ 302 (486)
T 2hr7_A 228 CRNFYLDGRCVETCPPPYYHFQDWRCVNFSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGYTMNSSNLLCT 302 (486)
T ss_dssp BSSEEETTEEESSCCTTCEEETTTEEECHHHHHHHHHHHHHTCSSSCCCCEEETTEEESSCCTTEEECTTSCBEE
T ss_pred CccccCCCccccccCCCeEecCCCEEecCcccccCCCcccCCCCcccccEeeECCEecccCCCCcccCCCCCccc
Confidence 44433 55665 9999774 35677765566541 1221 0012343211 12246 4999987654333443
Done!