Citrus Sinensis ID: 006791

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-
MIELPLDPRVNKTGDIWHICIEDLPRSEVLYGYRVDGPRDWHQGHRFDSSIVLIDPYAKLVEGRRHFGDASAKLSKFLGTYEFESLPFDWGDNYKLPNIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK
cEEEEccccccccccEEEEEEccccccccEEEEEECccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccHHHccccHHHHHHccccEEEcccccccccccHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccEEcccccccccEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHccccccccEEEcccccccccccccccccccccccccccHHHHHHHcccccccHHHHHHHHcccccccccccccccccEEEECcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccEEcccccccccccEEEEEEEcccccEEEEEEccccccEEEEccccccccccEEEEEcccccccccccccccccccEEEEcccEEEEEEEc
MIELPLDPRVNKTGDIWHICIEDLPRSEVLYGYRVDGPRDWHQGHRFDSSIVLIDPYAKLVEGRRHFGDASAKLSKFLGTYEFESLPFDWGDNYKLPNIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK
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MIELPLDPRVNKTGDIWHICIEDLPRSEVLYGYRVDGPRDWHQGHRFDSSIVLIDPYAKLVEGRRHFGDASAKLSKFLGTYEFESLPFDWGDNYKLPNIPEKDLVIYEMNVRAFTGDESSGLDPEIRGSYLGLIQKIPHLLELGINAVELLPVFEFDEMEFQRRRNPRDHMVNTWGYSTINFFSPMSRYAAGGGGPLKASWEFKEMVKALHGAGIEVILDVVYNHTNEADDANPYTTSFRGIDNKVYYMVDGTGQLLNYAGCGNTLNCNHPVVMELILDSLRHWVVEYHVDGFRFDLASVLCRGTDGSPLNAPPLIRAIAKDAILSRCKIIAEPWDCRGLYLVGKFPNWDRWAEWNGKYRDDLRKFIKGDPGMKGILATRISGSSDLYRVNKRKPYHSINFIIAHDGFTLYDLVSYNYKHNEANGEGGNDGCNDNFSWNCGFEGETDDASIKALRSRQMKNFHLALMVSQGTPMMLMGDEYGHTRYGNNNSYGHDTAINNFQWGQLETKKNSHYRFFSEVIKFRQSRRVFGREDFLNINDVTWHEDNWDNYDSKFLAFTLHDNNGADIYLAFNAHDFFVKVSLPPPPPKRQWFRVVDTNLESPDDIVPEGAAGTGSTYNLSPYSSILLEAK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Isoamylase 3, chloroplastic Involved in starch catabolism. ISA3 removes different branches than ISA1-ISA2, namely short chains that prevent amylopectin crystallization. May be the debranching enzyme required to assist beta-amylases for starch degradation in leaves at night.confidentQ9M0S5
Glycogen debranching enzyme Hydrolyzes the alpha-1,6-glucosidic linkages in glycogen which has first been partially depolymerized by phosphorylase. Shows only very little activity with native glycogen.probableA4WFL4
Glycogen operon protein GlgX homolog probableP0A4Y4

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.2.-.-Glycosylases.probable
3.2.1.-Glycosidases, i.e. enzymes hydrolyzing O- and S-glycosyl compounds.probable
3.2.1.68Isoamylase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1BF2, chain A
Confidence level:very confident
Coverage over the Query: 12-631
View the alignment between query and template
View the model in PyMOL