Query 006792
Match_columns 631
No_of_seqs 354 out of 1941
Neff 6.5
Searched_HMMs 46136
Date Thu Mar 28 14:33:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006792.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006792hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02638 cellulose synthase A 100.0 6E-148 1E-152 1268.2 39.9 597 3-614 253-960 (1079)
2 PLN02436 cellulose synthase A 100.0 9E-148 2E-152 1261.8 40.9 597 3-614 269-976 (1094)
3 PLN02400 cellulose synthase 100.0 9E-148 2E-152 1267.1 38.7 597 3-614 260-965 (1085)
4 PLN02195 cellulose synthase A 100.0 9E-147 2E-151 1249.7 42.2 597 3-614 156-857 (977)
5 PLN02915 cellulose synthase A 100.0 1E-146 3E-151 1254.2 42.8 597 3-614 191-924 (1044)
6 PLN02189 cellulose synthase 100.0 8E-147 2E-151 1255.4 41.0 597 3-614 235-922 (1040)
7 PLN02248 cellulose synthase-li 100.0 3E-144 6E-149 1236.3 41.5 601 3-614 266-1017(1135)
8 PLN02190 cellulose synthase-li 100.0 7E-144 1E-148 1204.9 40.7 587 1-613 5-638 (756)
9 PLN02893 Cellulose synthase-li 100.0 8E-140 2E-144 1178.4 46.2 580 2-613 9-627 (734)
10 PF03552 Cellulose_synt: Cellu 100.0 7E-133 1E-137 1114.0 25.0 507 97-614 1-606 (720)
11 PRK11498 bcsA cellulose syntha 100.0 7.9E-60 1.7E-64 546.0 42.7 425 19-628 184-624 (852)
12 TIGR03030 CelA cellulose synth 100.0 1.1E-59 2.4E-64 545.5 43.0 371 19-551 55-434 (713)
13 PRK14583 hmsR N-glycosyltransf 100.0 1.3E-39 2.8E-44 359.7 40.0 349 91-616 71-440 (444)
14 PRK05454 glucosyltransferase M 100.0 5.9E-38 1.3E-42 359.5 41.9 343 19-523 40-403 (691)
15 COG1215 Glycosyltransferases, 100.0 7.2E-37 1.6E-41 334.5 28.7 234 94-497 53-291 (439)
16 PRK11204 N-glycosyltransferase 100.0 1E-35 2.2E-40 325.5 37.5 232 91-498 50-287 (420)
17 cd04191 Glucan_BSP_ModH Glucan 100.0 4.2E-37 9E-42 316.0 24.5 241 97-492 1-253 (254)
18 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 8.8E-36 1.9E-40 328.8 34.2 285 92-548 46-341 (439)
19 PRK14716 bacteriophage N4 adso 100.0 1.2E-32 2.7E-37 306.1 36.6 260 92-518 63-352 (504)
20 cd06437 CESA_CaSu_A2 Cellulose 100.0 2.9E-32 6.2E-37 273.7 22.3 227 95-490 1-232 (232)
21 cd06421 CESA_CelA_like CESA_Ce 100.0 1.8E-31 3.9E-36 266.1 22.1 229 95-494 1-234 (234)
22 PRK11234 nfrB bacteriophage N4 100.0 3.8E-30 8.3E-35 296.7 35.4 243 87-495 56-334 (727)
23 cd06427 CESA_like_2 CESA_like_ 100.0 7.6E-31 1.7E-35 265.6 22.4 230 95-497 1-237 (241)
24 cd06435 CESA_NdvC_like NdvC_li 100.0 4.4E-30 9.5E-35 257.7 23.4 231 98-497 1-235 (236)
25 PF13641 Glyco_tranf_2_3: Glyc 100.0 2.4E-30 5.1E-35 258.0 6.2 224 95-489 1-228 (228)
26 TIGR03472 HpnI hopanoid biosyn 100.0 1.8E-27 4E-32 257.4 26.7 228 92-491 38-273 (373)
27 cd04190 Chitin_synth_C C-termi 100.0 1.2E-28 2.7E-33 251.1 15.2 172 270-492 64-243 (244)
28 cd02520 Glucosylceramide_synth 99.9 4.1E-27 8.9E-32 231.0 18.1 193 95-489 1-195 (196)
29 PRK15489 nfrB bacteriophage N4 99.9 6.2E-25 1.3E-29 251.1 33.7 236 91-494 67-341 (703)
30 cd04192 GT_2_like_e Subfamily 99.9 6.8E-26 1.5E-30 224.5 21.8 221 99-489 1-229 (229)
31 cd06434 GT2_HAS Hyaluronan syn 99.9 1.6E-25 3.5E-30 223.9 21.2 229 96-492 1-234 (235)
32 cd06439 CESA_like_1 CESA_like_ 99.9 3.8E-25 8.2E-30 224.0 20.8 226 89-492 23-250 (251)
33 TIGR03469 HonB hopene-associat 99.9 1.1E-22 2.4E-27 221.0 30.1 230 91-488 36-280 (384)
34 cd02525 Succinoglycan_BP_ExoA 99.9 3.2E-22 7E-27 200.7 21.0 226 96-497 1-234 (249)
35 cd06436 GlcNAc-1-P_transferase 99.9 1.5E-20 3.2E-25 184.3 16.6 167 99-374 1-178 (191)
36 COG2943 MdoH Membrane glycosyl 99.8 2.5E-18 5.5E-23 184.8 32.6 270 94-523 143-423 (736)
37 cd06438 EpsO_like EpsO protein 99.8 2.2E-20 4.8E-25 181.2 13.3 162 99-372 1-168 (183)
38 cd04184 GT2_RfbC_Mx_like Myxoc 99.8 8.5E-19 1.8E-23 171.0 17.0 193 95-463 1-195 (202)
39 PF13632 Glyco_trans_2_3: Glyc 99.8 1.5E-18 3.2E-23 169.4 16.2 137 286-490 1-143 (193)
40 cd04195 GT2_AmsE_like GT2_AmsE 99.8 3.2E-18 6.9E-23 167.1 16.0 189 98-462 1-194 (201)
41 cd02510 pp-GalNAc-T pp-GalNAc- 99.8 1.3E-17 2.9E-22 174.6 17.4 112 98-313 1-113 (299)
42 PF03142 Chitin_synth_2: Chiti 99.7 5.2E-16 1.1E-20 172.7 27.0 305 93-495 23-379 (527)
43 cd06433 GT_2_WfgS_like WfgS an 99.7 4.2E-17 9E-22 157.4 15.9 186 98-463 1-188 (202)
44 cd02522 GT_2_like_a GT_2_like_ 99.7 1.5E-16 3.2E-21 157.4 19.0 178 97-460 1-178 (221)
45 PLN02726 dolichyl-phosphate be 99.7 2.9E-16 6.4E-21 159.5 21.1 203 92-462 6-211 (243)
46 cd04196 GT_2_like_d Subfamily 99.7 1.9E-16 4.1E-21 155.2 15.9 193 98-463 1-197 (214)
47 cd06913 beta3GnTL1_like Beta 1 99.7 1.4E-15 2.9E-20 151.5 20.8 112 99-312 1-113 (219)
48 cd06442 DPM1_like DPM1_like re 99.7 1.1E-15 2.4E-20 151.4 19.5 108 99-314 1-108 (224)
49 cd06420 GT2_Chondriotin_Pol_N 99.7 1E-15 2.3E-20 146.8 18.4 171 99-463 1-174 (182)
50 cd04186 GT_2_like_c Subfamily 99.7 6.2E-16 1.3E-20 144.7 16.4 156 99-463 1-159 (166)
51 PRK10073 putative glycosyl tra 99.7 2.1E-15 4.5E-20 160.9 18.3 109 94-312 5-113 (328)
52 cd04185 GT_2_like_b Subfamily 99.6 7.7E-15 1.7E-19 143.7 18.3 174 99-474 1-176 (202)
53 PF13506 Glyco_transf_21: Glyc 99.6 3.9E-15 8.4E-20 145.1 15.0 153 264-488 15-175 (175)
54 cd02526 GT2_RfbF_like RfbF is 99.6 2.3E-15 5E-20 150.7 13.1 149 250-471 48-204 (237)
55 cd04188 DPG_synthase DPG_synth 99.6 1.2E-14 2.7E-19 143.7 18.1 108 99-313 1-111 (211)
56 cd06423 CESA_like CESA_like is 99.6 2.5E-15 5.4E-20 139.7 9.7 163 99-374 1-169 (180)
57 PRK10018 putative glycosyl tra 99.6 8.1E-14 1.7E-18 145.5 20.3 109 93-310 3-111 (279)
58 PTZ00260 dolichyl-phosphate be 99.6 8.8E-13 1.9E-17 141.1 28.1 117 92-311 67-189 (333)
59 PF00535 Glycos_transf_2: Glyc 99.6 2.8E-15 6E-20 139.4 5.8 166 98-374 1-168 (169)
60 PRK10063 putative glycosyl tra 99.5 2.3E-13 5E-18 139.6 19.1 48 95-146 1-49 (248)
61 cd04179 DPM_DPG-synthase_like 99.5 9.7E-14 2.1E-18 133.3 13.3 165 99-374 1-166 (185)
62 cd04187 DPM1_like_bac Bacteria 99.4 2.6E-12 5.6E-17 123.7 16.3 107 250-374 56-162 (181)
63 PRK13915 putative glucosyl-3-p 99.4 5.2E-12 1.1E-16 133.7 16.4 118 92-315 28-148 (306)
64 TIGR01556 rhamnosyltran L-rham 99.4 3.3E-12 7.2E-17 132.5 14.6 145 249-463 45-195 (281)
65 PRK10714 undecaprenyl phosphat 99.4 1.2E-10 2.6E-15 124.2 26.7 42 264-310 75-116 (325)
66 PF10111 Glyco_tranf_2_2: Glyc 99.4 1.9E-11 4E-16 127.7 18.0 130 265-463 74-216 (281)
67 cd00761 Glyco_tranf_GTA_type G 99.3 3.1E-11 6.7E-16 109.4 14.9 113 99-324 1-114 (156)
68 COG1216 Predicted glycosyltran 99.3 2.7E-11 5.8E-16 127.9 15.2 197 94-463 2-214 (305)
69 KOG2571 Chitin synthase/hyalur 99.2 4.8E-11 1E-15 137.7 13.9 167 266-490 425-597 (862)
70 COG0463 WcaA Glycosyltransfera 99.0 2E-09 4.4E-14 100.1 11.9 47 94-146 2-48 (291)
71 cd02511 Beta4Glucosyltransfera 99.0 3.1E-09 6.7E-14 107.2 12.6 43 265-312 57-99 (229)
72 KOG2547 Ceramide glucosyltrans 98.7 7.5E-08 1.6E-12 101.4 10.8 226 92-488 82-314 (431)
73 KOG2978 Dolichol-phosphate man 98.6 2.1E-06 4.5E-11 83.2 16.2 54 249-312 63-116 (238)
74 KOG2977 Glycosyltransferase [G 98.4 9.4E-07 2E-11 90.5 9.0 114 96-310 68-186 (323)
75 cd02514 GT13_GLCNAC-TI GT13_GL 98.0 6.3E-05 1.4E-09 80.6 13.3 44 97-144 2-45 (334)
76 KOG3738 Predicted polypeptide 97.1 0.0017 3.7E-08 69.6 8.2 49 92-143 121-169 (559)
77 KOG3737 Predicted polypeptide 96.8 0.0046 1E-07 66.2 9.1 49 91-142 151-199 (603)
78 KOG3736 Polypeptide N-acetylga 96.4 0.0032 7E-08 71.6 4.8 117 92-313 139-256 (578)
79 PF13704 Glyco_tranf_2_4: Glyc 95.3 0.059 1.3E-06 46.7 7.1 33 109-146 3-35 (97)
80 PF13712 Glyco_tranf_2_5: Glyc 94.2 0.14 3.1E-06 51.8 7.6 47 265-315 40-87 (217)
81 COG4092 Predicted glycosyltran 91.6 2.5 5.3E-05 43.9 11.8 81 248-331 61-142 (346)
82 PF02364 Glucan_synthase: 1,3- 91.1 0.46 1E-05 56.3 6.9 72 440-516 409-481 (817)
83 PF03452 Anp1: Anp1; InterPro 90.4 3.9 8.4E-05 42.8 12.3 57 92-152 22-80 (269)
84 cd00899 b4GalT Beta-4-Galactos 88.8 1.1 2.5E-05 45.4 6.8 38 264-302 47-84 (219)
85 PF03071 GNT-I: GNT-I family; 88.7 1.9 4.1E-05 48.1 9.0 49 92-145 90-139 (434)
86 PRK14503 mannosyl-3-phosphogly 88.6 3.4 7.5E-05 44.7 10.4 43 264-309 142-184 (393)
87 TIGR02460 osmo_MPGsynth mannos 88.6 3.7 7.9E-05 44.2 10.5 43 264-309 141-183 (381)
88 PF09488 Osmo_MPGsynth: Mannos 85.6 6.7 0.00014 42.5 10.6 43 264-309 141-183 (381)
89 PF01644 Chitin_synth_1: Chiti 84.3 15 0.00033 35.6 11.5 49 251-309 111-163 (163)
90 PRK14502 bifunctional mannosyl 79.8 12 0.00027 44.0 10.7 43 264-309 146-188 (694)
91 PF05679 CHGN: Chondroitin N-a 67.1 47 0.001 38.0 11.3 48 250-305 315-362 (499)
92 PF02709 Glyco_transf_7C: N-te 63.9 6.9 0.00015 33.1 2.9 22 442-463 46-67 (78)
93 cd02540 GT2_GlmU_N_bac N-termi 59.0 95 0.0021 30.6 10.7 44 265-311 73-117 (229)
94 PF13896 Glyco_transf_49: Glyc 54.3 17 0.00036 39.0 4.6 36 270-310 118-153 (317)
95 PF02434 Fringe: Fringe-like; 54.1 29 0.00062 36.0 6.1 30 282-313 85-114 (252)
96 PF11316 Rhamno_transf: Putati 48.9 1.8E+02 0.0039 29.9 10.9 55 248-310 84-140 (234)
97 TIGR03584 PseF pseudaminic aci 42.1 3.4E+02 0.0073 27.3 11.7 58 265-322 76-133 (222)
98 PLN03153 hypothetical protein; 40.7 1.3E+02 0.0029 34.5 9.0 30 282-313 209-238 (537)
99 PF01762 Galactosyl_T: Galacto 38.7 39 0.00085 33.1 4.2 37 269-309 69-105 (195)
100 KOG0916 1,3-beta-glucan syntha 36.4 30 0.00065 43.6 3.4 71 440-515 1173-1244(1679)
101 PF04724 Glyco_transf_17: Glyc 36.1 96 0.0021 34.0 6.9 36 268-305 164-199 (356)
102 TIGR03310 matur_ygfJ molybdenu 34.7 1E+02 0.0022 29.4 6.2 42 265-310 74-116 (188)
103 cd04182 GT_2_like_f GT_2_like_ 34.2 1.2E+02 0.0026 28.6 6.7 43 265-310 74-117 (186)
104 PRK09382 ispDF bifunctional 2- 33.6 1.1E+02 0.0023 33.8 6.9 40 267-310 83-122 (378)
105 COG4097 Predicted ferric reduc 32.5 2E+02 0.0044 31.8 8.4 65 93-176 342-406 (438)
106 PRK00317 mobA molybdopterin-gu 31.5 98 0.0021 29.9 5.6 43 265-311 74-116 (193)
107 TIGR02665 molyb_mobA molybdopt 28.8 1.2E+02 0.0025 29.0 5.6 42 265-311 73-115 (186)
108 KOG3916 UDP-Gal:glucosylcerami 28.5 2.7E+02 0.0059 30.3 8.5 34 265-298 197-230 (372)
109 PF06306 CgtA: Beta-1,4-N-acet 28.1 1.3E+02 0.0027 32.5 5.9 35 265-303 160-194 (347)
110 cd02503 MobA MobA catalyzes th 26.0 2.2E+02 0.0047 27.0 6.9 42 264-309 68-109 (181)
111 PRK02726 molybdopterin-guanine 25.4 3.2E+02 0.007 26.8 8.1 42 265-310 78-119 (200)
112 KOG4179 Lysyl hydrolase/glycos 22.4 3.8E+02 0.0082 30.0 8.3 36 267-307 98-133 (568)
No 1
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=5.8e-148 Score=1268.19 Aligned_cols=597 Identities=35% Similarity=0.652 Sum_probs=545.3
Q ss_pred CCCCceeeeecCch-hhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhheeccc
Q 006792 3 SPLPLHVCHVNNLS-VIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (631)
Q Consensus 3 ~~~~l~~~~~~~~~-~~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (631)
..+||+++.+.++. ..+||+++++++++++++|+||+++.. .++.|+|+++++||+||+|+|+|+|+.||+|++|
T Consensus 253 ~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~R 328 (1079)
T PLN02638 253 ARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPV----RNAYALWLISVICEIWFALSWILDQFPKWLPVNR 328 (1079)
T ss_pred CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccC----CccHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 58899999998554 267999999999999999999998854 3468999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHh
Q 006792 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRF 154 (631)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~f 154 (631)
.+++++|.+ +++||+|||||||.||.||||.+++|||+|+||.|||.|||.|||+|||++..|+++|.||++|
T Consensus 329 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 408 (1079)
T PLN02638 329 ETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEF 408 (1079)
T ss_pred ccCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence 999998853 2469999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHhhCCccCCcccccccCCC-CCCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC---------C
Q 006792 155 AKWWLPFCRRYGIKTICPQAYFSEADS-DDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE-------DGE---------Y 217 (631)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~~~-~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~-------~g~---------~ 217 (631)
||.||||||||+|||||||+||+++.+ ..++.+|+|++||+.||++|||||+|||.+.+ .|+ +
T Consensus 409 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g 488 (1079)
T PLN02638 409 ARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPG 488 (1079)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCC
Confidence 999999999999999999999999855 45677789999999999999999999997652 222 5
Q ss_pred CCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 006792 218 GNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCN 297 (631)
Q Consensus 218 ~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~ 297 (631)
+.++|||+||||+++++++ .|.++.++|+|+||+||||||++||+||||||+++|+|++|||||||+++||||++|
T Consensus 489 ~~~~dHp~IiqVll~~~~~----~d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiN 564 (1079)
T PLN02638 489 NNTRDHPGMIQVFLGHSGG----LDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYIN 564 (1079)
T ss_pred CCCCCCHHHHHHHhcCCCc----cccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccC
Confidence 5789999999999998764 255678899999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccChHHHHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCc
Q 006792 298 DPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTH 377 (631)
Q Consensus 298 ~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~ 377 (631)
||++++++||||+||+.|.++||||+||+|+|++++|+|+|++++||+++++|+||+|||+|+||||+|||+||++.+|+
T Consensus 565 ns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~ 644 (1079)
T PLN02638 565 NSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPP 644 (1079)
T ss_pred chHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988542
Q ss_pred c----------------------------------------------------------------------hhhhhhcCc
Q 006792 378 T----------------------------------------------------------------------ELKDTFGKS 387 (631)
Q Consensus 378 ~----------------------------------------------------------------------~~~~~fg~~ 387 (631)
+ ++.++||+|
T Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S 724 (1079)
T PLN02638 645 IKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQS 724 (1079)
T ss_pred ccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhcccc
Confidence 1 123689999
Q ss_pred hHHHHhHhhhhhcccCCCCCcchhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCe
Q 006792 388 NVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQ 467 (631)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~ 467 (631)
.+|++|+..+.++.. ....+++++++|++|++|+||++|.||+|+||.|+|+|||+.||++||++||||+|++|++++
T Consensus 725 ~~fi~S~~~~~~~~~--~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~A 802 (1079)
T PLN02638 725 AVFVASTLMENGGVP--QSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPA 802 (1079)
T ss_pred HHHHHHHHHhhcCCC--CCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchH
Confidence 999999988876644 235678999999999999999999999999999999999999999999999999999877789
Q ss_pred eEeecCCCHHHHhhhhhhhhhhhhHHHHhhcCCcccCC-CCCCHHHHHHhhhhhHhhHHhHHHHHHHHHHHHHHHHcCCc
Q 006792 468 FLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGP-SRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGIS 546 (631)
Q Consensus 468 ~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~-~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~ 546 (631)
|.|++|+|+.+++.||+||++|++|++++++||++++. ++|++.||++|+++++|+ ++++|.++|+++|++||++|++
T Consensus 803 F~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp-~~sip~liY~llP~l~Ll~G~~ 881 (1079)
T PLN02638 803 FKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYP-ITSIPLLLYCTLPAVCLLTGKF 881 (1079)
T ss_pred hcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCc
Confidence 99999999999999999999999999999999999763 589999999999999999 9999999999999999999999
Q ss_pred ccccchhhhhh---hhhh------cccccccchhhHHHHhhccchhhHHHHhHHHHHHHHHHHhhccc------ceeecc
Q 006792 547 LYPEVTTNNTR---SAFK------NIENLPAEQVVNNFIDNKIDVMFFFFIHRFQARLLSYFHSFSYQ------RFVNTC 611 (631)
Q Consensus 547 ~~p~~~~~~~l---~~f~------~i~~~~~g~~~~~~~~~~~~~~~~W~i~~~sah~~av~q~~~~~------~fv~T~ 611 (631)
++|+++.++++ ++|+ .+++++.|.++..||++| +||++.++|+|+||++|+..-+ .|.+|+
T Consensus 882 i~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQ----r~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTs 957 (1079)
T PLN02638 882 IIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNE----QFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTS 957 (1079)
T ss_pred cCCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhh----hheehhhhHHHHHHHHHHHHHHHccCcccceecc
Confidence 99998876542 2222 268889999999999999 9999999999999999986433 688888
Q ss_pred ccc
Q 006792 612 KRS 614 (631)
Q Consensus 612 k~~ 614 (631)
|-.
T Consensus 958 K~~ 960 (1079)
T PLN02638 958 KAS 960 (1079)
T ss_pred ccc
Confidence 854
No 2
>PLN02436 cellulose synthase A
Probab=100.00 E-value=9.4e-148 Score=1261.82 Aligned_cols=597 Identities=35% Similarity=0.639 Sum_probs=544.6
Q ss_pred CCCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhheeccc
Q 006792 3 SPLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (631)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (631)
..+||+++.+.++.. .+||+++++++++++++|+||+++..+ ++.|+|+++++||+||+|+|+|+|+.||+|++|
T Consensus 269 ~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~----~a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv~R 344 (1094)
T PLN02436 269 GRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVN----DAYGLWLTSVICEIWFAVSWILDQFPKWYPIER 344 (1094)
T ss_pred cCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCc----ccHHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 478999999986543 469999999999999999999988543 368999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHh
Q 006792 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRF 154 (631)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~f 154 (631)
.+++++|.+ +++||+|||||||.||.||||.+++|||+|+||.|||.|||.|||+|||++..|+++|.||++|
T Consensus 345 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 424 (1094)
T PLN02436 345 ETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEF 424 (1094)
T ss_pred eeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHH
Confidence 999998853 2469999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHhhCCccCCcccccccCCC-CCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-C------C---------C
Q 006792 155 AKWWLPFCRRYGIKTICPQAYFSEADS-DDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-G------E---------Y 217 (631)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~~~-~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~-g------~---------~ 217 (631)
||.||||||||+|||||||+||+++.+ .+++.+++|++||+.||++|||||+|||.+.++ + + +
T Consensus 425 Ak~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W~g 504 (1094)
T PLN02436 425 ARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPWPG 504 (1094)
T ss_pred HHhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccCCC
Confidence 999999999999999999999999855 445668899999999999999999999987653 1 1 5
Q ss_pred CCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 006792 218 GNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCN 297 (631)
Q Consensus 218 ~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~ 297 (631)
++++|||+||||++++++. .|.++.++|+|+||+||||||++||+||||||+++|+|++|||+||||++||||+.|
T Consensus 505 ~~~~dHp~IIqVll~~~~~----~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiN 580 (1094)
T PLN02436 505 NNVRDHPGMIQVFLGHSGV----RDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYIN 580 (1094)
T ss_pred CCCCCCccceEEEecCCCC----cccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccC
Confidence 5789999999999998763 356778899999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccChHHHHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCc
Q 006792 298 DPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTH 377 (631)
Q Consensus 298 ~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~ 377 (631)
||+++|++||||+||+.|.++||||+||+|+|++++|+|+|++++||++.++|+||+|||+|+||||+|||+||++..|+
T Consensus 581 ns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~pp 660 (1094)
T PLN02436 581 NSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAP 660 (1094)
T ss_pred chHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998654
Q ss_pred c----------------------------------------------------------------------hhhhhhcCc
Q 006792 378 T----------------------------------------------------------------------ELKDTFGKS 387 (631)
Q Consensus 378 ~----------------------------------------------------------------------~~~~~fg~~ 387 (631)
+ ++.++||+|
T Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S 740 (1094)
T PLN02436 661 KKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFGQS 740 (1094)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhccc
Confidence 1 122579999
Q ss_pred hHHHHhHhhhhhcccCCCCCcchhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCe
Q 006792 388 NVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQ 467 (631)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~ 467 (631)
.+|++|+..+.++... ...+++++++|++|+||+||++|.||+|+||.|+|+|||+.||++||++||||+|++|++++
T Consensus 741 ~~fi~S~~~~~~~~~~--~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r~A 818 (1094)
T PLN02436 741 PVFVASTLLENGGVPR--NASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPA 818 (1094)
T ss_pred HHHHHHHHHhhcCCCC--CCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCchh
Confidence 9999999998754322 34678899999999999999999999999999999999999999999999999999877789
Q ss_pred eEeecCCCHHHHhhhhhhhhhhhhHHHHhhcCCcccCC-CCCCHHHHHHhhhhhHhhHHhHHHHHHHHHHHHHHHHcCCc
Q 006792 468 FLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGP-SRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGIS 546 (631)
Q Consensus 468 ~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~-~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~ 546 (631)
|.|.+|+|+.+++.||+||++|++|++++++||++++. ++|+++||++|+++++|+ +.++|.++|+++|++||++|++
T Consensus 819 F~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~-l~Slp~liY~~lP~l~LL~G~~ 897 (1094)
T PLN02436 819 FKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYP-WTSIPLIVYCTLPAICLLTGKF 897 (1094)
T ss_pred hcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCe
Confidence 99999999999999999999999999999999999763 479999999999999999 9999999999999999999999
Q ss_pred ccccchhhhhh---hhhh------cccccccchhhHHHHhhccchhhHHHHhHHHHHHHHHHHhhccc------ceeecc
Q 006792 547 LYPEVTTNNTR---SAFK------NIENLPAEQVVNNFIDNKIDVMFFFFIHRFQARLLSYFHSFSYQ------RFVNTC 611 (631)
Q Consensus 547 ~~p~~~~~~~l---~~f~------~i~~~~~g~~~~~~~~~~~~~~~~W~i~~~sah~~av~q~~~~~------~fv~T~ 611 (631)
++|+++.++++ ++|+ .+++++.|.++..||++| +||++.++|+|+||++|+..-+ .|.+|+
T Consensus 898 i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQ----q~w~I~~tSa~Lfavl~~iLKvLggs~~~F~VTs 973 (1094)
T PLN02436 898 IVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNE----QFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTS 973 (1094)
T ss_pred ecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhh----hHHHHHHHHHHHHHHHHHHHHHhccCcccceecc
Confidence 99998887643 2222 267889999999999999 9999999999999999987633 688888
Q ss_pred ccc
Q 006792 612 KRS 614 (631)
Q Consensus 612 k~~ 614 (631)
|-.
T Consensus 974 K~~ 976 (1094)
T PLN02436 974 KAA 976 (1094)
T ss_pred ccc
Confidence 854
No 3
>PLN02400 cellulose synthase
Probab=100.00 E-value=8.9e-148 Score=1267.09 Aligned_cols=597 Identities=35% Similarity=0.642 Sum_probs=544.5
Q ss_pred CCCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhheeccc
Q 006792 3 SPLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (631)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (631)
..+||+++.+.++.. .+||+++++++++++++|+||+++..+ ++.|+|+++++||+||+|+|+|+|+.||+|++|
T Consensus 260 ~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~----~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R 335 (1085)
T PLN02400 260 ARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVK----DAYGLWLTSVICEIWFALSWLLDQFPKWYPINR 335 (1085)
T ss_pred ccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCc----ccHHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 368999999985543 679999999999999999999988543 368999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHh
Q 006792 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRF 154 (631)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~f 154 (631)
.+++++|.+ +++||.|||||||.||.||||.+++|||+|+||.|||.|||.|||+|||++..|+++|.||++|
T Consensus 336 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa~F 415 (1085)
T PLN02400 336 ETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEF 415 (1085)
T ss_pred eeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHH
Confidence 999998853 2469999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHhhCCccCCcccccccCCC-CCCCCChhhHHHHHHHHHHHHHHHHHHHHhh-------hcCC---------C
Q 006792 155 AKWWLPFCRRYGIKTICPQAYFSEADS-DDYFGDSEFMVEKKKIKEKYEMFEEHVTKAV-------EDGE---------Y 217 (631)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~~~-~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~-------~~g~---------~ 217 (631)
||.||||||||+|||||||+||+++.+ .+++.+|+|++||+.||++|||||+|||.+. +.|+ +
T Consensus 416 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt~W~g 495 (1085)
T PLN02400 416 ARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTPWPG 495 (1085)
T ss_pred HHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccCccCCC
Confidence 999999999999999999999999855 4466779999999999999999999999875 2221 5
Q ss_pred CCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 006792 218 GNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCN 297 (631)
Q Consensus 218 ~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~ 297 (631)
++++|||+||||+++++++ .|.++.++|+|+||+||||||++||+||||||+++|+|++|||+||||++||||++|
T Consensus 496 ~~~~dHp~iIqVll~~~~~----~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~N 571 (1085)
T PLN02400 496 NNPRDHPGMIQVFLGHSGG----LDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFN 571 (1085)
T ss_pred CCCCCCchhhhhhhcCCCC----cccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccC
Confidence 5789999999999999764 355778899999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccChHHHHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCc
Q 006792 298 DPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTH 377 (631)
Q Consensus 298 ~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~ 377 (631)
||+++|++||||+||+.|.++||||+||+|+|++++|+|+|++++||++.++|+||+|||+|+||||+|||+||++.+|+
T Consensus 572 ns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG~~p~ 651 (1085)
T PLN02400 572 NSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPV 651 (1085)
T ss_pred CchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCcceeeeeeccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987552
Q ss_pred --------------------------------------------------------------------chhhhhhcCchH
Q 006792 378 --------------------------------------------------------------------TELKDTFGKSNV 389 (631)
Q Consensus 378 --------------------------------------------------------------------~~~~~~fg~~~~ 389 (631)
+++.++||+|.+
T Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~ 731 (1085)
T PLN02400 652 LTEEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPV 731 (1085)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhccccHH
Confidence 013358999999
Q ss_pred HHHhHhhhhhcccCCCCCcchhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeE
Q 006792 390 LINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFL 469 (631)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~ 469 (631)
|++|+..+.++. .....+++++++|++|+||+||++|.||+|+||.|+|+|||+.||++||++||||+|++|++++|.
T Consensus 732 fi~S~~~~~~~~--~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~af~ 809 (1085)
T PLN02400 732 FIAATFMEQGGI--PPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFK 809 (1085)
T ss_pred HHHHHHHHhcCC--CCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCcHhhc
Confidence 999998554332 234567899999999999999999999999999999999999999999999999999988789999
Q ss_pred eecCCCHHHHhhhhhhhhhhhhHHHHhhcCCcccCC-CCCCHHHHHHhhhhhHhhHHhHHHHHHHHHHHHHHHHcCCccc
Q 006792 470 GTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGP-SRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLY 548 (631)
Q Consensus 470 g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~-~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~~~ 548 (631)
|+||+|+.+++.||+||++|++|++++++||++++. ++|++.||++|+++++|| +.++|.++|+++|++||++|++++
T Consensus 810 GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~-~~slp~liY~llP~l~LltG~~i~ 888 (1085)
T PLN02400 810 GSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYP-ITSIPLLAYCVLPAFCLITNKFII 888 (1085)
T ss_pred CcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCccC
Confidence 999999999999999999999999999999999763 689999999999999999 999999999999999999999999
Q ss_pred ccchhhhhh---hhhh------cccccccchhhHHHHhhccchhhHHHHhHHHHHHHHHHHhhccc------ceeecccc
Q 006792 549 PEVTTNNTR---SAFK------NIENLPAEQVVNNFIDNKIDVMFFFFIHRFQARLLSYFHSFSYQ------RFVNTCKR 613 (631)
Q Consensus 549 p~~~~~~~l---~~f~------~i~~~~~g~~~~~~~~~~~~~~~~W~i~~~sah~~av~q~~~~~------~fv~T~k~ 613 (631)
|.++.++++ ++|+ .+++++.|.++..||++| +||++.++|+|+||++|+..-+ .|.+|+|-
T Consensus 889 P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQ----q~w~I~~~Sa~Lfavl~~ilKvLgg~~~~F~VTsK~ 964 (1085)
T PLN02400 889 PEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNE----QFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKA 964 (1085)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhcc----ceeeehhhHHHHHHHHHHHHHHhcCCcccceecCCc
Confidence 998877543 2221 268889999999999999 9999999999999999997543 69899985
Q ss_pred c
Q 006792 614 S 614 (631)
Q Consensus 614 ~ 614 (631)
.
T Consensus 965 ~ 965 (1085)
T PLN02400 965 S 965 (1085)
T ss_pred c
Confidence 4
No 4
>PLN02195 cellulose synthase A
Probab=100.00 E-value=8.9e-147 Score=1249.70 Aligned_cols=597 Identities=36% Similarity=0.660 Sum_probs=543.2
Q ss_pred CCCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhheeccc
Q 006792 3 SPLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (631)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (631)
..+||+++.+.++.. .+||+++++++++++++|+||+++..+ ++.|+|+++++||+||+|+|+++|+.||+|++|
T Consensus 156 ~~~pL~~~~~i~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~----~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R 231 (977)
T PLN02195 156 AYEPLSRVIPIPRNKLTPYRAVIIMRLIILGLFFHYRITNPVD----SAFGLWLTSVICEIWFAFSWVLDQFPKWSPINR 231 (977)
T ss_pred ccCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCccc----cchHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 468999999986543 469999999999999999999988543 456999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHh
Q 006792 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRF 154 (631)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~f 154 (631)
.+++++|.+ +++||+|||||||.||.||||.+++|||+|+||.|||.|||.|||+|||++..|+++|.||++|
T Consensus 232 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 311 (977)
T PLN02195 232 ETYIDRLSARYEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEF 311 (977)
T ss_pred eECHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHH
Confidence 999998853 2469999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHhhCCccCCcccccccCCCC-CCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcC-------C---------C
Q 006792 155 AKWWLPFCRRYGIKTICPQAYFSEADSD-DYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDG-------E---------Y 217 (631)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~~~~-~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g-------~---------~ 217 (631)
||.||||||||+|||||||+||+++.+. +++.+|+|++||+.||++|||||+|||.+.++. + +
T Consensus 312 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g 391 (977)
T PLN02195 312 ARKWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWPG 391 (977)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCCC
Confidence 9999999999999999999999998553 356779999999999999999999999876431 1 5
Q ss_pred CCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 006792 218 GNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCN 297 (631)
Q Consensus 218 ~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~ 297 (631)
+.++|||+||||+++++++ .|.++.++|+|+||+||||||++||+||||||+++|+|+++||+|||+++||||++|
T Consensus 392 ~~~~dHp~IIqVll~~~~~----~d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n 467 (977)
T PLN02195 392 NNTRDHPGMIQVFLGETGA----RDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVN 467 (977)
T ss_pred CCCCCCcchhhhhccCCCC----cccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccC
Confidence 5789999999999987653 355778899999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccChHHHHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCc
Q 006792 298 DPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTH 377 (631)
Q Consensus 298 ~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~ 377 (631)
||++|+++||||+||+.|.++||||+||+|+|++++|+|++++.+||+++++|+||+|||+|+||||+|||+||++.+|+
T Consensus 468 ~s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~p~ 547 (977)
T PLN02195 468 NSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPP 547 (977)
T ss_pred cHHHHHHHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeeeeccccccCCccccccCceeeehhhhccCcc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999987642
Q ss_pred c---------------------------------------------------------------hhhhhhcCchHHHHhH
Q 006792 378 T---------------------------------------------------------------ELKDTFGKSNVLINSL 394 (631)
Q Consensus 378 ~---------------------------------------------------------------~~~~~fg~~~~~~~~~ 394 (631)
. ++..+||+|.+|++|+
T Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~ 627 (977)
T PLN02195 548 SLPRLPKSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIEST 627 (977)
T ss_pred ccccccccccccccccccccccccccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHHHH
Confidence 1 1334899999999999
Q ss_pred hhhhhcccCCCCCcchhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCC
Q 006792 395 HQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTT 474 (631)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~ 474 (631)
..+.++... ....+++++||++|+||+||++|.||+|+||.|+|+|||+.||++||++||||+|++|++++|.|++|+
T Consensus 628 ~~~~~~~~~--~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP~ 705 (977)
T PLN02195 628 LMENGGVPE--SANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPI 705 (977)
T ss_pred HHHhcCCCC--CCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCCC
Confidence 887765443 345678999999999999999999999999999999999999999999999999999877899999999
Q ss_pred CHHHHhhhhhhhhhhhhHHHHhhcCCcccCC--CCCCHHHHHHhhhhhHhhHHhHHHHHHHHHHHHHHHHcCCcccccch
Q 006792 475 NLNDLLIQGTRWGSGLTDVGLSRFCPLLYGP--SRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVT 552 (631)
Q Consensus 475 tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~--~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~~~p~~~ 552 (631)
|+.+++.||+||++|++|++++++||++++. ++|++.||++|+++++|+ ++++|.++|+++|++||++|++++|+++
T Consensus 706 ~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~-~~slp~liY~~lP~l~Ll~G~~i~P~vs 784 (977)
T PLN02195 706 NLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYP-FTSLPLIAYCTLPAICLLTGKFIIPTLS 784 (977)
T ss_pred CHHHHHHHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCeecccch
Confidence 9999999999999999999999999999763 579999999999999999 9999999999999999999999999988
Q ss_pred hhhhh---hhhh------cccccccchhhHHHHhhccchhhHHHHhHHHHHHHHHHHhhccc------ceeeccccc
Q 006792 553 TNNTR---SAFK------NIENLPAEQVVNNFIDNKIDVMFFFFIHRFQARLLSYFHSFSYQ------RFVNTCKRS 614 (631)
Q Consensus 553 ~~~~l---~~f~------~i~~~~~g~~~~~~~~~~~~~~~~W~i~~~sah~~av~q~~~~~------~fv~T~k~~ 614 (631)
.++++ ++|+ .+++.+.|.++..||++| +||++.++|+|+||++|+..-+ .|.+|+|-.
T Consensus 785 ~~~~~~f~~lfl~~~~~~~lE~~~sG~si~~WWrnq----q~w~I~~tSa~Lfavl~~llKvLggs~~~F~VTsK~~ 857 (977)
T PLN02195 785 NLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNE----QFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAA 857 (977)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHhhhh----hhhhhhhhHHHHHHHHHHHHHHHcCCCccceeccccc
Confidence 76543 2222 267888999999999999 9999999999999999986543 688888854
No 5
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=1.3e-146 Score=1254.19 Aligned_cols=597 Identities=35% Similarity=0.633 Sum_probs=540.5
Q ss_pred CCCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhheeccc
Q 006792 3 SPLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (631)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (631)
..+||+++.+.++.. .+||+++++++++++++|+||+++ ++.++.|+|+++++||+||+|+|+|+|+.||+|++|
T Consensus 191 ~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~----~~~~a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R 266 (1044)
T PLN02915 191 ARQPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILT----PAYDAYPLWLISVICEIWFALSWILDQFPKWFPINR 266 (1044)
T ss_pred cCCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcC----cCCCchHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 468999999986543 469999999999999999999988 334568999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHh
Q 006792 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRF 154 (631)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~f 154 (631)
.+++++|.. +++||+|||||+|.||.||||.+++|||+|+||.|||.|||.|||+|||++..|+++|.||++|
T Consensus 267 ~t~~drL~~r~e~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 346 (1044)
T PLN02915 267 ETYLDRLSMRFERDGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEF 346 (1044)
T ss_pred ccCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHH
Confidence 999998863 1349999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHhhCCccCCcccccccCCC-CCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC---------C
Q 006792 155 AKWWLPFCRRYGIKTICPQAYFSEADS-DDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-------GE---------Y 217 (631)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~~~-~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~-------g~---------~ 217 (631)
||.||||||||+|||||||+||+++.+ ..++.+++|++||+.||++|||||+|||.+.++ |+ +
T Consensus 347 Ak~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W~g 426 (1044)
T PLN02915 347 ARRWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPG 426 (1044)
T ss_pred HHhhcchhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccCCC
Confidence 999999999999999999999999855 445667899999999999999999999987643 21 4
Q ss_pred CCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 006792 218 GNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCN 297 (631)
Q Consensus 218 ~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~ 297 (631)
+.++|||+||||+++++++ .|.++.++|+|+||+||||||++||+||||||+.+|+|++|||+||||++||||++|
T Consensus 427 ~~~~dHp~IIqVll~~~~~----~d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~N 502 (1044)
T PLN02915 427 NNTRDHPGMIQVYLGSEGA----LDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYIN 502 (1044)
T ss_pred CCCCCCccceEEeecCCCC----cccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccC
Confidence 4578999999999998653 355778899999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccChHHHHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCc
Q 006792 298 DPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTH 377 (631)
Q Consensus 298 ~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~ 377 (631)
||+++|++||||+||+.|.++||||+||+|+|++++|+|+|++++||++.++|+||+|||+|+||||+|||+||++..|+
T Consensus 503 ns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~~pp 582 (1044)
T PLN02915 503 NSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDPP 582 (1044)
T ss_pred cchhhHhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecCcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987553
Q ss_pred c-------------------------------------------------------------------------------
Q 006792 378 T------------------------------------------------------------------------------- 378 (631)
Q Consensus 378 ~------------------------------------------------------------------------------- 378 (631)
.
T Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (1044)
T PLN02915 583 VSEKRPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEIEE 662 (1044)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 1
Q ss_pred -----------------hhhhhhcCchHHHHhHhhhhhcccCCCCCcchhhHHhhcccccccccccccccccccccCCcc
Q 006792 379 -----------------ELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSV 441 (631)
Q Consensus 379 -----------------~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sl 441 (631)
.+.++||+|.+|++|+..+.++. .....+++++++|++|+||+||++|.||+|+||.|+|+
T Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~--~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSv 740 (1044)
T PLN02915 663 GLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGGL--PEGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSV 740 (1044)
T ss_pred ccccccchhhhhhhhhhhhhhhcCCcHHHHHHHHHhhcCC--CCCCCcHHHHHHHHhccccCCCccCchhHhhCcccccc
Confidence 12348999999999998865443 22346778999999999999999999999999999999
Q ss_pred cchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhhhhhhhhhHHHHhhcCCcccC-CCCCCHHHHHHhhhhh
Q 006792 442 SEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELS 520 (631)
Q Consensus 442 tED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~-~~~l~~~qrl~y~~~~ 520 (631)
|||+.||++||++||||+|++|++++|.|++|+|+.++++||+||++|++|++++++||++++ .++|+++||++|++++
T Consensus 741 TEDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~~ 820 (1044)
T PLN02915 741 TEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINTI 820 (1044)
T ss_pred ccHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHHHH
Confidence 999999999999999999998877899999999999999999999999999999999999975 3589999999999999
Q ss_pred HhhHHhHHHHHHHHHHHHHHHHcCCcccccchhh---hhhhhhhc------ccccccchhhHHHHhhccchhhHHHHhHH
Q 006792 521 FFPLLYCLPLWCLATLPQLCLLNGISLYPEVTTN---NTRSAFKN------IENLPAEQVVNNFIDNKIDVMFFFFIHRF 591 (631)
Q Consensus 521 ~~~~~~~~~~l~~~~~P~~~ll~g~~~~p~~~~~---~~l~~f~~------i~~~~~g~~~~~~~~~~~~~~~~W~i~~~ 591 (631)
+|+ +.++|.++|+++|++||++|++++|.++.. +++.+|+. +++++.|.++..||++| +||++.++
T Consensus 821 ~yp-~~slp~liY~llP~l~LLtG~~i~P~~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQ----q~w~I~~t 895 (1044)
T PLN02915 821 VYP-FTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNE----QFWVIGGV 895 (1044)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhh----hHHHHHHH
Confidence 999 999999999999999999999999987543 22222222 57888999999999999 89999999
Q ss_pred HHHHHHHHHhhccc------ceeeccccc
Q 006792 592 QARLLSYFHSFSYQ------RFVNTCKRS 614 (631)
Q Consensus 592 sah~~av~q~~~~~------~fv~T~k~~ 614 (631)
|+|+||++|+..-+ .|.+|+|-.
T Consensus 896 Sa~Lfavl~~iLKvLg~se~~F~VTsK~~ 924 (1044)
T PLN02915 896 SAHLFAVFQGLLKVLGGVDTNFTVTSKAA 924 (1044)
T ss_pred HHHHHHHHHHHHHHhcccCCcceecCCcc
Confidence 99999999875533 688888754
No 6
>PLN02189 cellulose synthase
Probab=100.00 E-value=8.5e-147 Score=1255.39 Aligned_cols=597 Identities=35% Similarity=0.639 Sum_probs=542.9
Q ss_pred CCCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhheeccc
Q 006792 3 SPLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (631)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (631)
..+||+++.+.++.. .+||+++++++++++++|+||+++..+ +..|+|+++++||+||+|+|+|+|+.||+|++|
T Consensus 235 ~~~pL~~~~~~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~----~~~~~W~~s~~~E~wFaf~Wll~q~~kw~Pv~R 310 (1040)
T PLN02189 235 ARQPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPVH----DAIGLWLTSIICEIWFAVSWILDQFPKWFPIDR 310 (1040)
T ss_pred CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhcCcCc----cchHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 579999999986543 469999999999999999999988543 358999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHh
Q 006792 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRF 154 (631)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~f 154 (631)
.+++++|.+ +++||+|||||||.||.||||.+++|||+|+||.|||.|||.|||+|||++..|+++|.||++|
T Consensus 311 ~t~~drL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 390 (1040)
T PLN02189 311 ETYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEF 390 (1040)
T ss_pred eeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence 999998853 1249999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHhhCCccCCcccccccCCC-CCCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC---------C
Q 006792 155 AKWWLPFCRRYGIKTICPQAYFSEADS-DDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE-------DGE---------Y 217 (631)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~~~-~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~-------~g~---------~ 217 (631)
||.||||||||+|||||||+||+++.+ ..++.+|+|++||+.||++|||||+|||.+.+ .++ +
T Consensus 391 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~W~g 470 (1040)
T PLN02189 391 ARKWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWPG 470 (1040)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCccCCC
Confidence 999999999999999999999999855 45667789999999999999999999997652 111 5
Q ss_pred CCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 006792 218 GNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCN 297 (631)
Q Consensus 218 ~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~ 297 (631)
+.++|||+||||+++++++ .|.++.++|+|+||+||||||++||+||||||+++|+|++||||||||++||||++|
T Consensus 471 ~~~~dHp~IiQVll~~~~~----~d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~N 546 (1040)
T PLN02189 471 NNTRDHPGMIQVFLGHSGG----HDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYIN 546 (1040)
T ss_pred CCCCCCHHHHHHHhcCCCC----ccccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccC
Confidence 5789999999999998764 245678899999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccChHHHHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCc
Q 006792 298 DPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTH 377 (631)
Q Consensus 298 ~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~ 377 (631)
||++|+++||||+||+.|.++||||+||+|+|++++|+|+|++++||+++++|+||+|||+|+||||+|||+||++..|+
T Consensus 547 ns~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~~p~ 626 (1040)
T PLN02189 547 NSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYDPP 626 (1040)
T ss_pred chHHHHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeeeecccccCCCccccccCceeeeeeeeccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998653
Q ss_pred c-------------------------------------------------hhhhhhcCchHHHHhHhhhhhcccCCCCCc
Q 006792 378 T-------------------------------------------------ELKDTFGKSNVLINSLHQSYKQNNANGENF 408 (631)
Q Consensus 378 ~-------------------------------------------------~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~ 408 (631)
+ ++..+||+|.+|++|+..+.++.. ....
T Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~--~~~~ 704 (1040)
T PLN02189 627 KGPKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGVP--PSSS 704 (1040)
T ss_pred cccccccccccchhhhcccccccccccccccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcCCC--CCCC
Confidence 1 223489999999999988854332 2345
Q ss_pred chhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhhhhhh
Q 006792 409 SNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGS 488 (631)
Q Consensus 409 ~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~ 488 (631)
..+++++|++|+||+||++|.||+|+||.|+|+|||+.||++||++||||+|++|++++|.|+||+|+.+++.||+||++
T Consensus 705 ~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~ 784 (1040)
T PLN02189 705 PAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWAL 784 (1040)
T ss_pred cHHHHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHhh
Confidence 77899999999999999999999999999999999999999999999999999887899999999999999999999999
Q ss_pred hhhHHHHhhcCCcccCC--CCCCHHHHHHhhhhhHhhHHhHHHHHHHHHHHHHHHHcCCcccccchhhhhh---hhhh--
Q 006792 489 GLTDVGLSRFCPLLYGP--SRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVTTNNTR---SAFK-- 561 (631)
Q Consensus 489 G~~qi~~~~~~p~~~~~--~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~~~p~~~~~~~l---~~f~-- 561 (631)
|++|++++++||++++. ++|++.||++|+++++|+ +.++|.++|+++|++||++|++++|.++.+++. .+|.
T Consensus 785 G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~-~~sip~liY~~lP~l~Ll~g~~i~p~vs~~~~~~fi~lf~~~ 863 (1040)
T PLN02189 785 GSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYP-FTSLPLLAYCTLPAICLLTGKFIMPPISTFASLFFIALFMSI 863 (1040)
T ss_pred hhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCcccCccchHHHHHHHHHHHHH
Confidence 99999999999999763 479999999999999999 999999999999999999999999998877643 1111
Q ss_pred ----cccccccchhhHHHHhhccchhhHHHHhHHHHHHHHHHHhhccc------ceeeccccc
Q 006792 562 ----NIENLPAEQVVNNFIDNKIDVMFFFFIHRFQARLLSYFHSFSYQ------RFVNTCKRS 614 (631)
Q Consensus 562 ----~i~~~~~g~~~~~~~~~~~~~~~~W~i~~~sah~~av~q~~~~~------~fv~T~k~~ 614 (631)
.+++.+.|.++..||++| +||++.++|+|+||++|+..-+ .|.+|+|-.
T Consensus 864 ~~~~llE~~~sG~s~~~WWrnQ----q~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~VTsK~~ 922 (1040)
T PLN02189 864 FATGILELRWSGVSIEEWWRNE----QFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKAT 922 (1040)
T ss_pred HHHHHHHHHhcCCcHHHHhhhh----hHHHHhhhHHHHHHHHHHHHHHhccCcccceeccccc
Confidence 157788899999999999 9999999999999999986543 688888854
No 7
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=2.8e-144 Score=1236.33 Aligned_cols=601 Identities=33% Similarity=0.561 Sum_probs=535.0
Q ss_pred CCCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhheeccc
Q 006792 3 SPLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (631)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (631)
..+||+++.+.++.. .+||+++++++++++++|+||+++ ++.++.|+|+++++||+||+|+|+|+|+.||+|++|
T Consensus 266 ~~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~----~~~~~~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv~R 341 (1135)
T PLN02248 266 PWRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRN----PNEDAMWLWGMSVVCEIWFAFSWLLDQLPKLCPINR 341 (1135)
T ss_pred CCCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcC----CCCcchHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 358999999985543 369999999999999999999988 234568999999999999999999999999999999
Q ss_pred cCCCCCCCC------------CCCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHH
Q 006792 82 TVFPERLPE------------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMR 149 (631)
Q Consensus 82 ~~~~~~l~~------------~~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ 149 (631)
.+++++|.+ +++||.|||||||.||+||||.+++|||+|+||.|||.|||.|||+|||++..|+++|.
T Consensus 342 ~t~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~ 421 (1135)
T PLN02248 342 ATDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMA 421 (1135)
T ss_pred ccCHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHH
Confidence 999887743 13699999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhHHHhhCCccCCcccccccCCC-CCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc--------------
Q 006792 150 EACRFAKWWLPFCRRYGIKTICPQAYFSEADS-DDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-------------- 214 (631)
Q Consensus 150 ea~~fa~~w~pfc~~~~v~~r~p~~yf~~~~~-~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~-------------- 214 (631)
||++|||.||||||||+|||||||+||+.+.+ .+++..|+|++||+.||++|||||+|||.+.+.
T Consensus 422 EAa~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~e~ 501 (1135)
T PLN02248 422 EAASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEI 501 (1135)
T ss_pred HHHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhHHH
Confidence 99999999999999999999999999999855 335667899999999999999999999987321
Q ss_pred ----------C-------------C----------------CCCCCCCccceeeeecccCcch--------hhhh--ccc
Q 006792 215 ----------G-------------E----------------YGNSQNHSTIIEIIQETFGESE--------TIRQ--ADL 245 (631)
Q Consensus 215 ----------g-------------~----------------~~~~~~h~~ii~v~~~~~~~~~--------~~~~--~~~ 245 (631)
| + +++++|||+||||++++++.+. ...| ..+
T Consensus 502 ~~~~~~~~~~~~~~~e~~~~~~~~wm~dgt~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d 581 (1135)
T PLN02248 502 KAKKKQRESGGGDPSEPLKVPKATWMADGTHWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVD 581 (1135)
T ss_pred HhhhhhhhhcccccccccccccceeeccCCcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCcccccccccccccc
Confidence 0 1 3578899999999998765221 2223 344
Q ss_pred cCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCc
Q 006792 246 VEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQ 325 (631)
Q Consensus 246 ~~~P~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq 325 (631)
.++|+|+||+||||||++||+||||||+.+|+|++||||||||++||||++|||++++++||||+||+ |.++||||+||
T Consensus 582 ~~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFPQ 660 (1135)
T PLN02248 582 IRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFPQ 660 (1135)
T ss_pred cccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcCCc
Confidence 58999999999999999999999999999999999999999999999999999999999999999998 88999999999
Q ss_pred ccccCCccChHHHHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCcch--------------------------
Q 006792 326 KFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTE-------------------------- 379 (631)
Q Consensus 326 ~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~-------------------------- 379 (631)
+|+|++++|+|+|++++||+++++|+||+|||+||||||+|||+||++.+|++.
T Consensus 661 rF~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (1135)
T PLN02248 661 RFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPE 740 (1135)
T ss_pred ccCCCCCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcCCccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999866421
Q ss_pred ---------------hhhhhcCchHHHHhHhhhhhcccCC------------------CCCcchhhHHhhcccccccccc
Q 006792 380 ---------------LKDTFGKSNVLINSLHQSYKQNNAN------------------GENFSNVLQEETGVLASCSYEH 426 (631)
Q Consensus 380 ---------------~~~~fg~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~a~~~~~c~ye~ 426 (631)
..++||+|.+|++|+..+..+.... ......++++||++|++|+||+
T Consensus 741 ~~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~ 820 (1135)
T PLN02248 741 EQPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYED 820 (1135)
T ss_pred ccccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhccccccc
Confidence 1248999999999997775321111 1234568899999999999999
Q ss_pred cccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhhhhhhhhhHHHHhhcCCcccCCC
Q 006792 427 QTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPS 506 (631)
Q Consensus 427 ~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~ 506 (631)
+|.||+++||.|+|+|||+.||++||++||||+||+|++++|.|++|+|+.++++||+||++|++|+++++++|++.+ +
T Consensus 821 ~T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~-~ 899 (1135)
T PLN02248 821 KTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS-R 899 (1135)
T ss_pred CCchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC-C
Confidence 999999999999999999999999999999999998778999999999999999999999999999999999998875 4
Q ss_pred CCCHHHHHHhhhhhHhhHHhHHHHHHHHHHHHHHHHcCCcccccchhhhhhhh---h------hcccccccchhhHHHHh
Q 006792 507 RMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVTTNNTRSA---F------KNIENLPAEQVVNNFID 577 (631)
Q Consensus 507 ~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~~~p~~~~~~~l~~---f------~~i~~~~~g~~~~~~~~ 577 (631)
+|++.||++|+++++|+ +.+++.++|+++|++||++|++++|+.+...+.++ + ..++..+.|.++..||+
T Consensus 900 ~Lsl~QRL~Yl~~~lyp-f~Slp~liY~llP~l~LLtGi~~~p~~~~~fl~yll~l~l~~~~~sllE~~wsGvsl~~WWr 978 (1135)
T PLN02248 900 RLKFLQRIAYLNVGIYP-FTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIITITLCLLAVLEIKWSGITLEEWWR 978 (1135)
T ss_pred CCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHhh
Confidence 79999999999999999 99999999999999999999999998754332211 1 12577788999999999
Q ss_pred hccchhhHHHHhHHHHHHHHHHHhhcc----c--ceeeccccc
Q 006792 578 NKIDVMFFFFIHRFQARLLSYFHSFSY----Q--RFVNTCKRS 614 (631)
Q Consensus 578 ~~~~~~~~W~i~~~sah~~av~q~~~~----~--~fv~T~k~~ 614 (631)
+| +||++.++++|++|++|+... + .|.+|+|-.
T Consensus 979 nQ----q~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~ 1017 (1135)
T PLN02248 979 NE----QFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSA 1017 (1135)
T ss_pred hh----heeeehhhHHHHHHHHHHHHHHhcCccccceeCCccc
Confidence 99 999999999999999999773 2 688999865
No 8
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=6.6e-144 Score=1204.89 Aligned_cols=587 Identities=34% Similarity=0.593 Sum_probs=529.2
Q ss_pred CCCCCCceeeeecCchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhheecc
Q 006792 1 MDSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVS 80 (631)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~ 80 (631)
+++.+|||++.+.++. .+|++.+++++++++|++||+++.++. .+.|+++++||+|++++|+|+|+.+|+|++
T Consensus 5 ~~~~~pL~~~~~~~~~--~~r~~~~~vl~~~~~~l~~R~~~~~~~-----~~~W~~~~~~E~wf~~~WlL~q~~kw~pv~ 77 (756)
T PLN02190 5 SSSLPPLCERISHKSY--FLRAVDLTILGLLFSLLLYRILHMSEN-----DTVWLVAFLCESCFSFVWLLITCIKWSPAE 77 (756)
T ss_pred cCCCCCceeeeeccch--hHHHHHHHHHHHHHHHHHHHHhCCCcc-----cHHHHHHHHHHHHHHHHHHHhccceeeecC
Confidence 4578999999998654 599999999999999999999998764 258899999999999999999999999999
Q ss_pred ccCCCCCCCCC-CCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhh
Q 006792 81 RTVFPERLPED-DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWL 159 (631)
Q Consensus 81 r~~~~~~l~~~-~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~ 159 (631)
|.++|++|.+. +++|+|||||||+||.||||.+|+|||+|+|+.|||+||+.|||+|||+++.|+++|.||++|||.||
T Consensus 78 r~~~p~~l~~r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~Wv 157 (756)
T PLN02190 78 YKPYPDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWV 157 (756)
T ss_pred CCCCcHHHHHhhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhc
Confidence 99999998763 46999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHhhCCccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------C----C-CCCCCCCccce
Q 006792 160 PFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-------G----E-YGNSQNHSTII 227 (631)
Q Consensus 160 pfc~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~-------g----~-~~~~~~h~~ii 227 (631)
||||||+|||||||+||++.... ..+++|++||+.||++|||||+|||++... + + +++++|||+||
T Consensus 158 PFCrK~~IepRaPe~YF~~~~~~--~~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~dH~~ii 235 (756)
T PLN02190 158 PFCKKYNVRVRAPFRYFLNPPVA--TEDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPNDHSTIV 235 (756)
T ss_pred ccccccCCCcCCHHHHhcCCCCC--CCCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCCCCCCCccce
Confidence 99999999999999999985332 234799999999999999999999987421 1 1 57889999999
Q ss_pred eeeecccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHH
Q 006792 228 EIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 307 (631)
Q Consensus 228 ~v~~~~~~~~~~~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~ 307 (631)
||++|+++. +.++.++|+++||+||||||++||+||||||+.+|+|++|||+|||+++||||+.|||++++++||
T Consensus 236 qVll~~~~~-----~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmC 310 (756)
T PLN02190 236 KVVWENKGG-----VGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMC 310 (756)
T ss_pred EEEecCCCC-----ccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhh
Confidence 999998653 335779999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCC-CceEEEccCcccccCCccChHHHHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCc---------
Q 006792 308 FHLDPKIS-SSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTH--------- 377 (631)
Q Consensus 308 ~f~Dp~~g-~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~--------- 377 (631)
||+||+.+ .++||||+||+|+ |+|+|++++||++.++|+||+|||+|+||||+|||+||++..|+
T Consensus 311 f~ld~~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~~ 385 (756)
T PLN02190 311 IFLQKSKNSNHCAFVQFPQEFY-----DSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLS 385 (756)
T ss_pred hhcCCCCCCCeeEEEeCchhhc-----cccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCccccccccccc
Confidence 99998754 5799999999997 67999999999999999999999999999999999999998653
Q ss_pred ----------chhhhhhcCchHHHHhHhhhhhcccCCCCCcchhhHHhhcccccccccccccccccccccCCcccchHHH
Q 006792 378 ----------TELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFT 447 (631)
Q Consensus 378 ----------~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t 447 (631)
.+..++||+|++|++|+..+.++.... ....++++++|++|+||+||++|.||+|+||.|+|+|||+.|
T Consensus 386 ~~~~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~~~-~~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~T 464 (756)
T PLN02190 386 SVATREFLAEDSLAREFGNSKEMVKSVVDALQRKPNP-QNSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNT 464 (756)
T ss_pred ccccccccchhhhhhhcCCcHHHHHHHHHHhccCCCC-ccchHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHH
Confidence 114479999999999998877543322 233568999999999999999999999999999999999999
Q ss_pred HHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhhhhhhhhhHHHHhhcCCcccC-CCCCCHHHHHHhhhhhHhhHHh
Q 006792 448 GFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLY 526 (631)
Q Consensus 448 ~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~~~ 526 (631)
|++||++||||+||+|+++++.|.+|+++.+.+.||+||++|++|++++++||++.+ .++|++.||++|++..+ + ++
T Consensus 465 Gl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~-~~ 542 (756)
T PLN02190 465 SIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-C-LR 542 (756)
T ss_pred HHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-H-HH
Confidence 999999999999999888999999999999999999999999999999999999975 46899999999999866 7 99
Q ss_pred HHHHHHHHHHHHHHHHcCCcccccchhhhhh-hh------hhcccccccchhhHHHHhhccchhhHHHHhHHHHHHHHHH
Q 006792 527 CLPLWCLATLPQLCLLNGISLYPEVTTNNTR-SA------FKNIENLPAEQVVNNFIDNKIDVMFFFFIHRFQARLLSYF 599 (631)
Q Consensus 527 ~~~~l~~~~~P~~~ll~g~~~~p~~~~~~~l-~~------f~~i~~~~~g~~~~~~~~~~~~~~~~W~i~~~sah~~av~ 599 (631)
++|+++|+++|++||++|++++|+......+ ++ +..+++++.|.+++.||++| +||++.++|+|++|++
T Consensus 543 sip~l~Y~~lP~l~Ll~g~~i~P~~~~~~~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnq----r~w~I~~~sa~l~a~~ 618 (756)
T PLN02190 543 SIPELIYCLLPAYCLLHNSALFPKGVYLGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQ----SFWRIKATSSWLFSIQ 618 (756)
T ss_pred HHHHHHHHHHHHHHHHcCCccccCccHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhh----heEEeecchHHHHHHH
Confidence 9999999999999999999999987543222 12 22368899999999999999 9999999999999999
Q ss_pred Hhhccc------ceeecccc
Q 006792 600 HSFSYQ------RFVNTCKR 613 (631)
Q Consensus 600 q~~~~~------~fv~T~k~ 613 (631)
|+..-. .|..|.|-
T Consensus 619 ~~~lK~lg~s~~~F~vTsK~ 638 (756)
T PLN02190 619 DIILKLLGISKTVFIVTKKT 638 (756)
T ss_pred HHHHHHhccccceEEEeecc
Confidence 987643 78788874
No 9
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=7.8e-140 Score=1178.40 Aligned_cols=580 Identities=39% Similarity=0.726 Sum_probs=518.3
Q ss_pred CCCCCceeeeecCchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhheeccc
Q 006792 2 DSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (631)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (631)
...+|||++++.+ .+.+||+++++++++++++++||+++.... ...|.|+++++||+||+|+|+++|+.||+|++|
T Consensus 9 ~~~~pL~~~~~~~-~~~~~R~~~~~~~~~i~~ll~~r~~~~~~~---~~~~~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r 84 (734)
T PLN02893 9 TGAPPLHTCHPMR-RTIANRVFAVVYSCAILALLYHHVIALLHS---TTTLITLLLLLADIVLAFMWATTQAFRMCPVHR 84 (734)
T ss_pred CCCCCceeeeecC-CchHHHHHHHHHHHHHHHHHHHHhcccccc---cchHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 4679999999974 456799999999999999999999887654 237899999999999999999999999999999
Q ss_pred cCCCCCCCC---CCCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhh
Q 006792 82 TVFPERLPE---DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWW 158 (631)
Q Consensus 82 ~~~~~~l~~---~~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w 158 (631)
.+++|+|.+ .+++|+|||||||.||.||||.+++|||+|+|+.|||.||+.|||+|||++..|+++|.||++|||.|
T Consensus 85 ~~~~~~L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~W 164 (734)
T PLN02893 85 RVFIEHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHW 164 (734)
T ss_pred ccCHHHHhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHhh
Confidence 999999974 35799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHhhCCccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCC--------------------CC
Q 006792 159 LPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGE--------------------YG 218 (631)
Q Consensus 159 ~pfc~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~--------------------~~ 218 (631)
|||||||+|||||||+||+++. +++.+||+.||++|||||+|||.+.++|. ++
T Consensus 165 vPFCrk~~ie~R~P~~YF~~~~-------~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~ 237 (734)
T PLN02893 165 LPFCKKNKIVERCPEAYFSSNS-------HSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKF 237 (734)
T ss_pred cccccccCCCcCCHHHHhccCC-------CccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccCcCCC
Confidence 9999999999999999998862 34678999999999999999998853321 45
Q ss_pred CCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCC
Q 006792 219 NSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCND 298 (631)
Q Consensus 219 ~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~ 298 (631)
+++|||+||||++|++++ .|.++.++|+++|++||||||++||+||||||+++++|+.+||||||+++||||++||
T Consensus 238 ~~~dH~~ivqV~l~~~~~----~d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~ 313 (734)
T PLN02893 238 TRQDHPTVIQVLLESGKD----KDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSND 313 (734)
T ss_pred CCCCCCceeeeeccCCCc----cchhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCc
Confidence 789999999999998753 2456678999999999999999999999999999999999999999999999999988
Q ss_pred hHHHHHHHHhhcCCCCCCceEEEccCcccccCCccChHHHHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCcc
Q 006792 299 PTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHT 378 (631)
Q Consensus 299 pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~ 378 (631)
|++++++||||+||+.+.++|+||+||+|+|++++|+|+|++++||+++++|+||++|++||||||+|||+||++..+.
T Consensus 314 p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~- 392 (734)
T PLN02893 314 PQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSS- 392 (734)
T ss_pred hhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCcc-
Confidence 9999999999999998889999999999999999999999999999999999999999999999999999999986421
Q ss_pred hhhhhhcCchHHHHhHhhhhhccc-CCCCCcchhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCe
Q 006792 379 ELKDTFGKSNVLINSLHQSYKQNN-ANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWT 457 (631)
Q Consensus 379 ~~~~~fg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwr 457 (631)
+..+...+.+... ......+++++++|.+|+||.||++|.||+++||.|+|+|||++||++||++|||
T Consensus 393 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWr 461 (734)
T PLN02893 393 -----------LILPEIPELNPDHLVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWK 461 (734)
T ss_pred -----------ccchhhhhcccccccccccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHhcCCc
Confidence 1111111111110 0112356789999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCeeEeecCCCHHHHhhhhhhhhhhhhHHHHhhcCCcccCCCCCCHHHHHHhhhhhHhhHHhHHHHHHHHHHH
Q 006792 458 STYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLP 537 (631)
Q Consensus 458 s~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P 537 (631)
|+|++|+++++.|++|+|+.++++||+||++|++|++++++||++++.++|++.||++|++.++|+ ++++|.++|+++|
T Consensus 462 SvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y~~~~~~~-~~slp~liY~~~P 540 (734)
T PLN02893 462 SIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHYAFWP-IWSIPITIYAFLP 540 (734)
T ss_pred EEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhcccCCCHHHHHHHHHHHHHH-HhHHHHHHHHHHH
Confidence 999988778999999999999999999999999999999999999875689999999999999999 8899999999999
Q ss_pred HHHHHcCCcccccchhhhhh---hhhhc------ccccccchhhHHHHhhccchhhHHHHhHHHHHHHHHHHhhccc---
Q 006792 538 QLCLLNGISLYPEVTTNNTR---SAFKN------IENLPAEQVVNNFIDNKIDVMFFFFIHRFQARLLSYFHSFSYQ--- 605 (631)
Q Consensus 538 ~~~ll~g~~~~p~~~~~~~l---~~f~~------i~~~~~g~~~~~~~~~~~~~~~~W~i~~~sah~~av~q~~~~~--- 605 (631)
++||++|++++|+++..+++ ++|++ +++.+.|.++..||++| ++|++.++++|++|++|...-.
T Consensus 541 ~l~Ll~g~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~q----r~w~I~~~ss~l~a~l~~iLk~lg~ 616 (734)
T PLN02893 541 QLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQ----RMWMIRGLSSFLFGLVEFLLKTLGI 616 (734)
T ss_pred HHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchh----eeeehHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999998877654 22211 56788999999999999 8999999999999988876422
Q ss_pred ---ceeecccc
Q 006792 606 ---RFVNTCKR 613 (631)
Q Consensus 606 ---~fv~T~k~ 613 (631)
.|.+|+|-
T Consensus 617 s~~~F~VT~K~ 627 (734)
T PLN02893 617 STFGFNVTSKV 627 (734)
T ss_pred cCCceeecCCC
Confidence 57777774
No 10
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=6.9e-133 Score=1113.96 Aligned_cols=507 Identities=43% Similarity=0.776 Sum_probs=469.4
Q ss_pred eEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccccc
Q 006792 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (631)
Q Consensus 97 VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (631)
|||||||.||+||||.+++|||+|+|++|||.|||.|||+|||+++.|+++|.||++|||.||||||||+||||||++||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC---------CCCCCCCccceeeeecccCcchh
Q 006792 177 SEADS-DDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-------GE---------YGNSQNHSTIIEIIQETFGESET 239 (631)
Q Consensus 177 ~~~~~-~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~-------g~---------~~~~~~h~~ii~v~~~~~~~~~~ 239 (631)
+++.+ .+++.+++|++||++||++||+||+|||.+.++ ++ +++++|||+||||+++++++
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~~--- 157 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPGG--- 157 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCCC---
Confidence 99844 556778999999999999999999999986432 22 56789999999999998764
Q ss_pred hhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceE
Q 006792 240 IRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLA 319 (631)
Q Consensus 240 ~~~~~~~~~P~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg 319 (631)
.|.++.++|+|+||+||||||++||+||||||+++|+|+.|||+|||+++||||+.|||++++++||||+||+.|..+|
T Consensus 158 -~~~~g~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~ 236 (720)
T PF03552_consen 158 -KDVDGNELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIA 236 (720)
T ss_pred -cccccCcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeE
Confidence 3667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCcccccCCccChHHHHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCc----------------------
Q 006792 320 FVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTH---------------------- 377 (631)
Q Consensus 320 ~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~---------------------- 377 (631)
|||+||+|+|++++|+|+|++.+||+++++|+||++||+|+||||+|||+||++.+|+
T Consensus 237 ~vQfpq~f~~i~~~d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~ 316 (720)
T PF03552_consen 237 FVQFPQRFDGIDKNDRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKK 316 (720)
T ss_pred EEeCCceeCCCCcCCCCCccceeeeeccccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCccc
Confidence 9999999999999999999999999999999999999999999999999999999886
Q ss_pred --------------------------------------------chhhhhhcCchHHHHhHhhhhhcccCCCCCcchhhH
Q 006792 378 --------------------------------------------TELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQ 413 (631)
Q Consensus 378 --------------------------------------------~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (631)
++++++||+|++||+|+..+.++. .....+++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~--~~~~~~~~~L 394 (720)
T PF03552_consen 317 KKSKKKPKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGGV--PRSPSPASLL 394 (720)
T ss_pred ccccccchhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcCC--CCCCChHHHH
Confidence 133368999999999998665432 2256678999
Q ss_pred HhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhhhhhhhhhHH
Q 006792 414 EETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDV 493 (631)
Q Consensus 414 ~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi 493 (631)
+||++|+||+||++|.||+|+||.|+|+|||+.||++||++||||+||.|++++|.|.||+|+.+.+.|++||+.|.+|+
T Consensus 395 ~EA~~V~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI 474 (720)
T PF03552_consen 395 EEAIHVASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEI 474 (720)
T ss_pred HHHHHHhcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEee
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred HHhhcCCcccC-CCCCCHHHHHHhhhhhHhhHHhHHHHHHHHHHHHHHHHcCCcccccchhhhhh---hhhh------cc
Q 006792 494 GLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVTTNNTR---SAFK------NI 563 (631)
Q Consensus 494 ~~~~~~p~~~~-~~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~~~p~~~~~~~l---~~f~------~i 563 (631)
+++|+||++++ +++|+++||++|++.++|+ ++|+|.++|+++|++||++|+++||+++..+++ .+|. .+
T Consensus 475 ~fSr~~Pl~~g~~~rL~~lQrLaY~~~~~yp-l~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~ll 553 (720)
T PF03552_consen 475 FFSRHCPLWYGYGGRLKFLQRLAYLNYMLYP-LTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLL 553 (720)
T ss_pred ehhcCCchhccCCCCCcHHHHHHHHHHhhhH-HHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHH
Confidence 99999999988 5689999999999999999 999999999999999999999999999877654 2222 26
Q ss_pred cccccchhhHHHHhhccchhhHHHHhHHHHHHHHHHHhhccc------ceeeccccc
Q 006792 564 ENLPAEQVVNNFIDNKIDVMFFFFIHRFQARLLSYFHSFSYQ------RFVNTCKRS 614 (631)
Q Consensus 564 ~~~~~g~~~~~~~~~~~~~~~~W~i~~~sah~~av~q~~~~~------~fv~T~k~~ 614 (631)
++++.|.++..||++| +||++.++++|++|++|+..-. .|..|.|-.
T Consensus 554 E~~wsG~si~~WWrnQ----q~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~ 606 (720)
T PF03552_consen 554 EFRWSGVSIREWWRNQ----QFWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVS 606 (720)
T ss_pred HHHhccCcHHHhhccc----ceeeehhhHHHHHHHHHHHHHHHcCCccceeeccccc
Confidence 8889999999999999 9999999999999999987543 787887754
No 11
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=7.9e-60 Score=546.02 Aligned_cols=425 Identities=24% Similarity=0.341 Sum_probs=328.1
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhheeccccCCCCCCCC-CCCCCc
Q 006792 19 INRL-HALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPE-DDKLPA 96 (631)
Q Consensus 19 ~~r~-~~~~~~~~~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~-~~~~P~ 96 (631)
+.|+ ++++.+++.++|++||++.+++..++.+..+.++++++|+++.+..+++.+..+.|..|.+.+ ++. .+.+|+
T Consensus 184 ~~~~~l~~l~~~~~~rY~~WR~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~~~--~~~~~~~~P~ 261 (852)
T PRK11498 184 FSALMLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVP--LPKDMSLWPT 261 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCC--CCcccCCCCc
Confidence 3444 444555567899999999999976666777888889999999988888888877787776332 333 356899
Q ss_pred eEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccccc
Q 006792 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (631)
Q Consensus 97 VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (631)
|||+||||| |+.+++++|+.+++++|||+++++|||+|||++|.|.+ +|+++
T Consensus 262 VsViIPtYN---E~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~--------------la~~~----------- 313 (852)
T PRK11498 262 VDIFVPTYN---EDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQ--------------FAQEV----------- 313 (852)
T ss_pred EEEEEecCC---CcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHH--------------HHHHC-----------
Confidence 999999999 87789999999999999999999999999999996531 11111
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEec
Q 006792 177 SEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSR 256 (631)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~R 256 (631)
++.|++|
T Consensus 314 -------------------------------------------------------------------------~v~yI~R 320 (852)
T PRK11498 314 -------------------------------------------------------------------------GVKYIAR 320 (852)
T ss_pred -------------------------------------------------------------------------CcEEEEe
Confidence 3678888
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhh-cCCCCCCceEEEccCcccccCCccC-
Q 006792 257 EKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKYD- 334 (631)
Q Consensus 257 ekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f-~Dp~~g~~vg~VQ~pq~f~n~~~~d- 334 (631)
++ +.|+||||+|+|+++ ++||||+++|||+++. ||+|++++.+| .||+ +|+||+||.|+|.+.-.
T Consensus 321 ~~----n~~gKAGnLN~aL~~----a~GEyIavlDAD~ip~-pdfL~~~V~~f~~dP~----VglVQtp~~f~n~dp~~r 387 (852)
T PRK11498 321 PT----HEHAKAGNINNALKY----AKGEFVAIFDCDHVPT-RSFLQMTMGWFLKDKK----LAMMQTPHHFFSPDPFER 387 (852)
T ss_pred CC----CCcchHHHHHHHHHh----CCCCEEEEECCCCCCC-hHHHHHHHHHHHhCCC----eEEEEcceeccCCchHHH
Confidence 76 468999999999999 8999999999999997 99999999876 6998 89999999998754211
Q ss_pred ------hHHHHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCc
Q 006792 335 ------IYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENF 408 (631)
Q Consensus 335 ------~~~~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~ 408 (631)
...++...||+.++.|.+.+++.++||+++++||++++++
T Consensus 388 nl~~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaLeeV---------------------------------- 433 (852)
T PRK11498 388 NLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDEI---------------------------------- 433 (852)
T ss_pred hhHHHhhcccchhHHHHHHHhHHHhhcccccccceeeeEHHHHHHh----------------------------------
Confidence 1223445789999999999999999999999999999876
Q ss_pred chhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhhhhhh
Q 006792 409 SNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGS 488 (631)
Q Consensus 409 ~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~ 488 (631)
|||++++++||++++++|+++||+++|++ ++.+.|++|+|++++++||.||++
T Consensus 434 -------------------------GGfd~~titED~dlslRL~~~Gyrv~yl~--~~~a~glaPesl~~~~~QR~RWar 486 (852)
T PRK11498 434 -------------------------GGIAVETVTEDAHTSLRLHRRGYTSAYMR--IPQAAGLATESLSAHIGQRIRWAR 486 (852)
T ss_pred -------------------------cCCCCCccCccHHHHHHHHHcCCEEEEEe--ccceeEECCCCHHHHHHHHHHHHH
Confidence 79999999999999999999999999998 489999999999999999999999
Q ss_pred hhhHHHHhhcCCcccCCCCCCHHHHHHhhhhhHhhHHhHHHHHHHHHHHHHHHHcCCcccccchhhhhhh----hhh--c
Q 006792 489 GLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVTTNNTRS----AFK--N 562 (631)
Q Consensus 489 G~~qi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~~~p~~~~~~~l~----~f~--~ 562 (631)
|++|++.. ++|++.+ ++++.||++|+++.+++ +.++|.++|+++|++|+++|+.++.......+.+ ++. .
T Consensus 487 G~lQi~r~-~~pl~~~--gL~~~qRl~y~~~~l~~-l~g~~~l~~l~~Pl~~l~~gi~~i~a~~~~i~~y~lP~~~~~~l 562 (852)
T PRK11498 487 GMVQIFRL-DNPLTGK--GLKLAQRLCYANAMLHF-LSGIPRLIFLTAPLAFLLLHAYIIYAPALMIALFVLPHMIHASL 562 (852)
T ss_pred HHHHHHHH-hChhccC--CCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCChheeCChHHHHHHHHHHHHHHHH
Confidence 99999975 5898753 69999999999988887 8999999999999999999998774322111111 000 0
Q ss_pred ccccccchhhHHHHhhccchhhHHHHhHHHHHHHHHHHhhcccceeeccccccccccccccccccc
Q 006792 563 IENLPAEQVVNNFIDNKIDVMFFFFIHRFQARLLSYFHSFSYQRFVNTCKRSFPLEVQSMHGEMSR 628 (631)
Q Consensus 563 i~~~~~g~~~~~~~~~~~~~~~~W~i~~~sah~~av~q~~~~~~fv~T~k~~~~~~~~~~~~~~~~ 628 (631)
....+.|.....||.+.+.....|.+...+ +.+++.. ..+.|-+|+|.. ..+...++|..++
T Consensus 563 ~~~~~~g~~r~~~wseiye~v~a~~l~~~~--~~~ll~p-~~~~F~VTpKg~-~~~~~~~~~~~~~ 624 (852)
T PRK11498 563 TNSRIQGKYRHSFWSEIYETVLAWYIAPPT--TVALFNP-HKGKFNVTAKGG-LVEEEYVDWVISR 624 (852)
T ss_pred HHHHhcCcchHhHHHHHHHHHHHHHHHHHH--HHHHcCc-cCCCcccCCCCc-cccccceehHHHH
Confidence 122234444556776532222233333221 1122222 345899999942 2344556665543
No 12
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=1.1e-59 Score=545.53 Aligned_cols=371 Identities=28% Similarity=0.392 Sum_probs=307.0
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhheeccccCCCCCCCCCCCCCce
Q 006792 19 INRLHALLHCIA-IGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAI 97 (631)
Q Consensus 19 ~~r~~~~~~~~~-~~~yl~~R~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~P~V 97 (631)
+.|++.++..++ .++|++||++.+++..++....+.++++++|++..++.+++.+..++|.+|...+.. .+.+.+|+|
T Consensus 55 ~~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~P~V 133 (713)
T TIGR03030 55 RPRLLLLVLSVFISLRYLWWRLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVPLP-LDPEEWPTV 133 (713)
T ss_pred hHHHHHHHHHHHHHHHHHHhheeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccCCC-CCcccCCee
Confidence 347666655555 589999999999997666666677888999999999888888888888877643322 124678999
Q ss_pred EEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCcccccc
Q 006792 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (631)
Q Consensus 98 dV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (631)
||+||+|| |+++++++|+.+++++|||+|+++|+|+||||+|.|.....++++
T Consensus 134 sViIP~yN---E~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~------------------------ 186 (713)
T TIGR03030 134 DVFIPTYN---EDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQA------------------------ 186 (713)
T ss_pred EEEEcCCC---CCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhh------------------------
Confidence 99999999 887888999999999999999999999999999988542212111
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEecc
Q 006792 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (631)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Re 257 (631)
+..+.+.++++..++ .++.|++|+
T Consensus 187 -----------~~~~~~~~~~~l~~~---------------------------------------------~~v~yi~r~ 210 (713)
T TIGR03030 187 -----------EAAQRREELKEFCRK---------------------------------------------LGVNYITRP 210 (713)
T ss_pred -----------hhhhhHHHHHHHHHH---------------------------------------------cCcEEEECC
Confidence 000011112211111 147899988
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CCCCCCceEEEccCcccccCCcc---
Q 006792 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKY--- 333 (631)
Q Consensus 258 krpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~~~--- 333 (631)
+ +.|+||||||+|+++ ++||||+++|||+++. ||+|++++++|. ||+ +|+||+||.|+|.+.-
T Consensus 211 ~----n~~~KAgnLN~al~~----a~gd~Il~lDAD~v~~-pd~L~~~v~~f~~dp~----v~~Vqtp~~f~~p~~~~~n 277 (713)
T TIGR03030 211 R----NVHAKAGNINNALKH----TDGELILIFDADHVPT-RDFLQRTVGWFVEDPK----LFLVQTPHFFVSPDPIERN 277 (713)
T ss_pred C----CCCCChHHHHHHHHh----cCCCEEEEECCCCCcC-hhHHHHHHHHHHhCCC----EEEEeCCeeccCCCHHhhh
Confidence 7 468999999999999 8999999999999997 999999999995 888 8999999999876421
Q ss_pred ----ChHHHHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcc
Q 006792 334 ----DIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFS 409 (631)
Q Consensus 334 ----d~~~~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~ 409 (631)
+.+.++...||..++.|.+.++++++||+++++||++++++
T Consensus 278 l~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~~i----------------------------------- 322 (713)
T TIGR03030 278 LGTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALDEI----------------------------------- 322 (713)
T ss_pred hHHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHHHc-----------------------------------
Confidence 22344556788999999999999999999999999999876
Q ss_pred hhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhhhhhhh
Q 006792 410 NVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 489 (631)
Q Consensus 410 ~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G 489 (631)
|||++++++||++++++|+++||+++|++ ++.+.|++|+|++++++||.||++|
T Consensus 323 ------------------------GGf~~~~vtED~~l~~rL~~~G~~~~y~~--~~~~~g~~p~sl~~~~~Qr~RWa~G 376 (713)
T TIGR03030 323 ------------------------GGIAGETVTEDAETALKLHRRGWNSAYLD--RPLIAGLAPETLSGHIGQRIRWAQG 376 (713)
T ss_pred ------------------------CCCCCCCcCcHHHHHHHHHHcCCeEEEec--cccccccCCCCHHHHHHHHHHHhcC
Confidence 78999999999999999999999999998 5889999999999999999999999
Q ss_pred hhHHHHhhcCCcccCCCCCCHHHHHHhhhhhHhhHHhHHHHHHHHHHHHHHHHcCCcccccc
Q 006792 490 LTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEV 551 (631)
Q Consensus 490 ~~qi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~~~p~~ 551 (631)
++|+++. .+|++.+ ++++.||++|+++.+++ +.+++.++|+++|++++++|.++++..
T Consensus 377 ~~qi~~~-~~pl~~~--gl~~~qrl~y~~~~~~~-~~~~~~~~~~~~P~~~l~~~~~~~~~~ 434 (713)
T TIGR03030 377 MMQIFRL-DNPLLKR--GLSFPQRLCYLNAMLFW-FFPLPRVIFLTAPLAYLFFGLNIFVAS 434 (713)
T ss_pred hHHHHhh-hCccccC--CCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCcceeCC
Confidence 9999875 4788754 69999999999988888 889999999999999999999988764
No 13
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=100.00 E-value=1.3e-39 Score=359.69 Aligned_cols=349 Identities=17% Similarity=0.141 Sum_probs=232.5
Q ss_pred CCCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccC
Q 006792 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (631)
Q Consensus 91 ~~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r 170 (631)
.+..|.|+|+||+|| |+ ..+.+||.|+++++||. ++|+|+|||++|.|.+.+.+..+
T Consensus 71 ~~~~p~vsViIP~yN---E~-~~i~~~l~sll~q~yp~--~eIivVdDgs~D~t~~~~~~~~~----------------- 127 (444)
T PRK14583 71 LKGHPLVSILVPCFN---EG-LNARETIHAALAQTYTN--IEVIAINDGSSDDTAQVLDALLA----------------- 127 (444)
T ss_pred cCCCCcEEEEEEeCC---CH-HHHHHHHHHHHcCCCCC--eEEEEEECCCCccHHHHHHHHHH-----------------
Confidence 346799999999999 66 47899999999999995 99999999999988653332110
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCc
Q 006792 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (631)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~ 250 (631)
+.|+
T Consensus 128 ----------------------------------------------------------------------------~~~~ 131 (444)
T PRK14583 128 ----------------------------------------------------------------------------EDPR 131 (444)
T ss_pred ----------------------------------------------------------------------------hCCC
Confidence 0134
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CCCCCCceEEEccCccccc
Q 006792 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHN 329 (631)
Q Consensus 251 l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n 329 (631)
+.++.+++ +++||+|+|.|++. +++|+++++|||++++ ||+|.+++..|. ||+ +|.||+.....|
T Consensus 132 v~vv~~~~-----n~Gka~AlN~gl~~----a~~d~iv~lDAD~~~~-~d~L~~lv~~~~~~~~----~g~v~g~~~~~~ 197 (444)
T PRK14583 132 LRVIHLAH-----NQGKAIALRMGAAA----ARSEYLVCIDGDALLD-KNAVPYLVAPLIANPR----TGAVTGNPRIRT 197 (444)
T ss_pred EEEEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCcC-HHHHHHHHHHHHhCCC----eEEEEccceecC
Confidence 55565544 35799999999999 8999999999999997 999999998775 777 788998776655
Q ss_pred CCccChHHH----HHHHHHHHHHHHhhhcCCcc-eeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCC
Q 006792 330 INKYDIYDG----RFRSAYCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNAN 404 (631)
Q Consensus 330 ~~~~d~~~~----~~~~f~~~~~~g~d~~~~~~-~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~ 404 (631)
. +..++. +...++..+.++.+..+..+ .+|+++++||+++.++
T Consensus 198 ~--~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~al~~v------------------------------ 245 (444)
T PRK14583 198 R--STLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRALADV------------------------------ 245 (444)
T ss_pred C--CcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHHHHHHc------------------------------
Confidence 3 223322 22334455666666666554 4688899999999865
Q ss_pred CCCcchhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhh
Q 006792 405 GENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGT 484 (631)
Q Consensus 405 ~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~ 484 (631)
|||+.+.++||++++++|+.+||++.|++ ++.+++++|+|++++++||.
T Consensus 246 -----------------------------Gg~~~~~i~ED~dl~~rl~~~G~~i~~~p--~a~~~~~~p~t~~~~~~Qr~ 294 (444)
T PRK14583 246 -----------------------------GYWSPDMITEDIDISWKLQLKHWSVFFEP--RGLCWILMPETLRGLWKQRL 294 (444)
T ss_pred -----------------------------CCCCCCcccccHHHHHHHHHcCCeEEEee--ccEEeeeCCCCHHHHHHHHH
Confidence 78999999999999999999999999998 58999999999999999999
Q ss_pred hhhhhhhHHHHhhcCCcccCCCCCCHHHHHHhhhhhHhhHHhHHHHHHHHHHHHHHHHcC-Cc---ccccchhhhhhhhh
Q 006792 485 RWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNG-IS---LYPEVTTNNTRSAF 560 (631)
Q Consensus 485 RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g-~~---~~p~~~~~~~l~~f 560 (631)
||++|.+|+++++...++....+..+.+-+.|+.+.+|.+...+. +...+++.+..+.. .. ++|.......+.+.
T Consensus 295 RW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (444)
T PRK14583 295 RWAQGGAEVFLKNMFKLWRWRNRRMWLLFLEYSLSITWAFTYLFS-ITLYLLGLVITLPPGIHVQSVFPPAFTGMVLALT 373 (444)
T ss_pred HHhCcHHHHHHHHHHHHhCcccccHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhCCcccccccccchHHHHHHHHHH
Confidence 999999999986533332211122233345555555554222221 22222222211111 11 11110000000000
Q ss_pred hc--------ccccccchhhHHHHhhccchhhHHHHhHHHHH---HHHHHHhhcccceeeccccccc
Q 006792 561 KN--------IENLPAEQVVNNFIDNKIDVMFFFFIHRFQAR---LLSYFHSFSYQRFVNTCKRSFP 616 (631)
Q Consensus 561 ~~--------i~~~~~g~~~~~~~~~~~~~~~~W~i~~~sah---~~av~q~~~~~~fv~T~k~~~~ 616 (631)
.. +...........++...++.++||+++.+++- .-+++|.......+++|+|++.
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 440 (444)
T PRK14583 374 CLLQFAISLVIERRYEPKLGHSLFWIIWYPMVYWMLNLFTTVVSFPKVMLITKRKRARWVSPDRGIG 440 (444)
T ss_pred HHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhHHHhcCCCCceEEeCCCCccc
Confidence 00 11111222233344455566689999876552 3455555555566688887764
No 14
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=5.9e-38 Score=359.51 Aligned_cols=343 Identities=17% Similarity=0.142 Sum_probs=238.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCCch--hHH---HHHHHHHHHHHHHHHHHHHHHhhheeccccCC----CC-CC
Q 006792 19 INRLHALLHCIAIGFLIYYRASYLLQETRAI--PII---LWLLVFASELLLSFIWLLGRAYLWRPVSRTVF----PE-RL 88 (631)
Q Consensus 19 ~~r~~~~~~~~~~~~yl~~R~~~~~~~~~~~--~~~---~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~----~~-~l 88 (631)
+.|++.++..++...|..|+...+++..+.. ... +-.+++..+.+.+...+++.+...+ .|... +. .-
T Consensus 40 ~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~--~~~~~~~~~~~~~~ 117 (691)
T PRK05454 40 LRRLILLGLTLAQTAVATWEMKAVLPYGGWTLLEPALLVLFALLFAWISLGFWTALMGFLQLLR--GRDKYSISASAAGD 117 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCcccCCcccccC
Confidence 6677777777778899999999888753321 111 1112233344444444444333322 11111 11 00
Q ss_pred CCCCCCCceEEEEeccCCCCCChH----HHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHh
Q 006792 89 PEDDKLPAIDVFICTADPEKEPAI----GVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRR 164 (631)
Q Consensus 89 ~~~~~~P~VdV~Ipt~n~~~Ep~~----~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~ 164 (631)
+.....|+|+|+||+|| |+++ .++.+++|+.+++||. +++|+|+|||++|.+.. .|.. .|-.+|++
T Consensus 118 ~~~~~~~~VaVliP~yN---Ed~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~--~e~~----~~~~L~~~ 187 (691)
T PRK05454 118 PPPPPEARTAILMPIYN---EDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAA--AEEA----AWLELRAE 187 (691)
T ss_pred CCCCCCCceEEEEeCCC---CChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHH--HHHH----HHHHHHHh
Confidence 11246799999999999 7665 4666677777899985 79999999999996632 1100 11111221
Q ss_pred hCCccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhcc
Q 006792 165 YGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQAD 244 (631)
Q Consensus 165 ~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~ 244 (631)
++
T Consensus 188 ~~------------------------------------------------------------------------------ 189 (691)
T PRK05454 188 LG------------------------------------------------------------------------------ 189 (691)
T ss_pred cC------------------------------------------------------------------------------
Confidence 11
Q ss_pred ccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CCCCCCceEEEcc
Q 006792 245 LVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQF 323 (631)
Q Consensus 245 ~~~~P~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~ 323 (631)
.-+++.|.+|++| .++||||+|.+++..+ .++|||+++|||+++. +|+|++++.+|. ||+ +|+||+
T Consensus 190 --~~~~i~yr~R~~n----~~~KaGNl~~~~~~~~--~~~eyivvLDADs~m~-~d~L~~lv~~m~~dP~----vGlVQt 256 (691)
T PRK05454 190 --GEGRIFYRRRRRN----VGRKAGNIADFCRRWG--GAYDYMVVLDADSLMS-GDTLVRLVRLMEANPR----AGLIQT 256 (691)
T ss_pred --CCCcEEEEECCcC----CCccHHHHHHHHHhcC--CCcCEEEEEcCCCCCC-HHHHHHHHHHHhhCcC----EEEEeC
Confidence 0136888888774 5789999999999976 6789999999999998 999999999886 998 899999
Q ss_pred CcccccCCccChHHHHH----HHHHHHHHHHhhhcCC--cceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhh
Q 006792 324 PQKFHNINKYDIYDGRF----RSAYCVQWQGMDGLKG--PVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQS 397 (631)
Q Consensus 324 pq~f~n~~~~d~~~~~~----~~f~~~~~~g~d~~~~--~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~ 397 (631)
++.+.|.+ ..++.-+ .++......|.+.|++ ..|+|+|+++||+|+.+++.
T Consensus 257 ~~~~~n~~--slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~~g--------------------- 313 (691)
T PRK05454 257 LPVAVGAD--TLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEHCG--------------------- 313 (691)
T ss_pred CccCcCCC--CHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHhcC---------------------
Confidence 99988753 3343322 2333345667776653 46999999999999976521
Q ss_pred hhcccCCCCCcchhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHH
Q 006792 398 YKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLN 477 (631)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~ 477 (631)
... -...+||..++++||++++.+|+++||+++|+++ .+.+++++|+|++
T Consensus 314 --------------------------lp~---L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd-~~~~~ee~P~tl~ 363 (691)
T PRK05454 314 --------------------------LPP---LPGRGPFGGHILSHDFVEAALMRRAGWGVWLAPD-LPGSYEELPPNLL 363 (691)
T ss_pred --------------------------Ccc---ccccCCCCCCcccHHHHHHHHHHHCCCEEEEcCc-cccccccCCCCHH
Confidence 000 0001689999999999999999999999999983 2578999999999
Q ss_pred HHhhhhhhhhhhhhHHHHhhcCCcccCCCCCCHHHHHHhhhhhHhh
Q 006792 478 DLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFP 523 (631)
Q Consensus 478 ~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~ 523 (631)
++++||.||++|++|++..- .. +++++.+|++|++..+.+
T Consensus 364 ~~~~qr~RW~~G~lQ~l~~l----~~--~gl~~~~R~~~l~g~~~y 403 (691)
T PRK05454 364 DELKRDRRWCQGNLQHLRLL----LA--KGLHPVSRLHFLTGIMSY 403 (691)
T ss_pred HHHHHHHHHHhchHHHHHHH----Hh--cCCCHHHHHHHHHHHHHH
Confidence 99999999999999987531 21 258889998877644333
No 15
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=7.2e-37 Score=334.54 Aligned_cols=234 Identities=26% Similarity=0.316 Sum_probs=184.6
Q ss_pred CCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCcc
Q 006792 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQ 173 (631)
Q Consensus 94 ~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~ 173 (631)
+|.|||+||+|| |+++++++|+.|++++|||. ++|+|+|||++|.|.+.+.| ++.+
T Consensus 53 ~p~vsviiP~yn---E~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~~~~~~~--------------~~~~----- 108 (439)
T COG1215 53 LPKVSVIIPAYN---EEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDETYEILEE--------------LGAE----- 108 (439)
T ss_pred CCceEEEEecCC---CchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhHHHHHHH--------------HHhh-----
Confidence 599999999999 88789999999999999997 99999999999987643322 2110
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEE
Q 006792 174 AYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVY 253 (631)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~y 253 (631)
+ + |+++.
T Consensus 109 ---------------------------~----------------------~------------------------~~~~~ 115 (439)
T COG1215 109 ---------------------------Y----------------------G------------------------PNFRV 115 (439)
T ss_pred ---------------------------c----------------------C------------------------cceEE
Confidence 0 0 12222
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCCcc
Q 006792 254 VSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKY 333 (631)
Q Consensus 254 v~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~ 333 (631)
+..++ .+++|++|+|.|+.. +++|+|+++|||++++ ||+|++++.+|.|+.. .|++|.|+.+.+.+..
T Consensus 116 ~~~~~----~~~gK~~al~~~l~~----~~~d~V~~~DaD~~~~-~d~l~~~~~~f~~~~~---~~v~~~~~~~~~~~~~ 183 (439)
T COG1215 116 IYPEK----KNGGKAGALNNGLKR----AKGDVVVILDADTVPE-PDALRELVSPFEDPPV---GAVVGTPRIRNRPDPS 183 (439)
T ss_pred Eeccc----cCccchHHHHHHHhh----cCCCEEEEEcCCCCCC-hhHHHHHHhhhcCCCe---eEEeCCceeeecCChh
Confidence 21112 468999999999999 8899999999999998 9999999999998874 3689999887754221
Q ss_pred ChHHHHHHHHHHH-----HHHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCc
Q 006792 334 DIYDGRFRSAYCV-----QWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENF 408 (631)
Q Consensus 334 d~~~~~~~~f~~~-----~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~ 408 (631)
..++......|.. ...+.+.....+++|+++++||++|.++
T Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~~~---------------------------------- 229 (439)
T COG1215 184 NLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSALEEV---------------------------------- 229 (439)
T ss_pred hhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHHHHh----------------------------------
Confidence 2222222222222 2222332235578999999999999865
Q ss_pred chhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhhhhhh
Q 006792 409 SNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGS 488 (631)
Q Consensus 409 ~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~ 488 (631)
|||...++|||.+++++++.+||++.|++ ++.+++++|+|++++++||.||++
T Consensus 230 -------------------------g~~~~~~i~ED~~lt~~l~~~G~~~~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~ 282 (439)
T COG1215 230 -------------------------GGWLEDTITEDADLTLRLHLRGYRVVYVP--EAIVWTEAPETLKELWRQRLRWAR 282 (439)
T ss_pred -------------------------CCCCCCceeccHHHHHHHHHCCCeEEEee--cceEeeeCcccHHHHHHHHHHHHc
Confidence 68999999999999999999999999998 589999999999999999999999
Q ss_pred hhhHHHHhh
Q 006792 489 GLTDVGLSR 497 (631)
Q Consensus 489 G~~qi~~~~ 497 (631)
|.+|++..+
T Consensus 283 g~~~~~~~~ 291 (439)
T COG1215 283 GGLQVLLLH 291 (439)
T ss_pred ccceeeehh
Confidence 999999753
No 16
>PRK11204 N-glycosyltransferase; Provisional
Probab=100.00 E-value=1e-35 Score=325.53 Aligned_cols=232 Identities=22% Similarity=0.252 Sum_probs=184.8
Q ss_pred CCCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccC
Q 006792 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (631)
Q Consensus 91 ~~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r 170 (631)
.+..|.|+|+||+|| |+ +.+.+|+.|+++++||. ++|+|+|||++|.|.+.+.+..+
T Consensus 50 ~~~~p~vsViIp~yn---e~-~~i~~~l~sl~~q~yp~--~eiiVvdD~s~d~t~~~l~~~~~----------------- 106 (420)
T PRK11204 50 LKEYPGVSILVPCYN---EG-ENVEETISHLLALRYPN--YEVIAINDGSSDNTGEILDRLAA----------------- 106 (420)
T ss_pred cCCCCCEEEEEecCC---CH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCccHHHHHHHHHH-----------------
Confidence 356799999999999 55 58999999999999994 99999999999987643322100
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCc
Q 006792 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (631)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~ 250 (631)
..|+
T Consensus 107 ----------------------------------------------------------------------------~~~~ 110 (420)
T PRK11204 107 ----------------------------------------------------------------------------QIPR 110 (420)
T ss_pred ----------------------------------------------------------------------------hCCc
Confidence 1245
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CCCCCCceEEEccCccccc
Q 006792 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHN 329 (631)
Q Consensus 251 l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n 329 (631)
+.++.+++ ++|||+|+|.|++. +++|+++++|||++++ ||+|.+++..|. ||+ ++.||+.....|
T Consensus 111 v~~i~~~~-----n~Gka~aln~g~~~----a~~d~i~~lDaD~~~~-~d~L~~l~~~~~~~~~----v~~v~g~~~~~~ 176 (420)
T PRK11204 111 LRVIHLAE-----NQGKANALNTGAAA----ARSEYLVCIDGDALLD-PDAAAYMVEHFLHNPR----VGAVTGNPRIRN 176 (420)
T ss_pred EEEEEcCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCCC-hhHHHHHHHHHHhCCC----eEEEECCceecc
Confidence 67776554 35799999999999 8999999999999997 999999999984 887 788998777665
Q ss_pred CCccChHHHHHH----HHHHHHHHHhhhcCCcc-eeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCC
Q 006792 330 INKYDIYDGRFR----SAYCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNAN 404 (631)
Q Consensus 330 ~~~~d~~~~~~~----~f~~~~~~g~d~~~~~~-~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~ 404 (631)
. +...+..+. ..+.....+....+... .+|+++++||+++.++
T Consensus 177 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~v------------------------------ 224 (420)
T PRK11204 177 R--STLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKSALHEV------------------------------ 224 (420)
T ss_pred c--hhHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHHHHHHh------------------------------
Confidence 3 222322222 22233334444444443 4688889999999865
Q ss_pred CCCcchhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhh
Q 006792 405 GENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGT 484 (631)
Q Consensus 405 ~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~ 484 (631)
|||+.+.++||++++++++++||++.|++ ++.++++.|+|++++++||.
T Consensus 225 -----------------------------gg~~~~~~~ED~~l~~rl~~~G~~i~~~p--~~~~~~~~p~t~~~~~~Qr~ 273 (420)
T PRK11204 225 -----------------------------GYWSTDMITEDIDISWKLQLRGWDIRYEP--RALCWILMPETLKGLWKQRL 273 (420)
T ss_pred -----------------------------CCCCCCcccchHHHHHHHHHcCCeEEecc--ccEEEeECcccHHHHHHHHH
Confidence 68999999999999999999999999998 58999999999999999999
Q ss_pred hhhhhhhHHHHhhc
Q 006792 485 RWGSGLTDVGLSRF 498 (631)
Q Consensus 485 RWa~G~~qi~~~~~ 498 (631)
||++|.+|.++++.
T Consensus 274 RW~~G~~~~l~~~~ 287 (420)
T PRK11204 274 RWAQGGAEVLLKNF 287 (420)
T ss_pred HHhcCHHHHHHHHH
Confidence 99999999998654
No 17
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=4.2e-37 Score=316.03 Aligned_cols=241 Identities=15% Similarity=0.182 Sum_probs=184.3
Q ss_pred eEEEEeccCCCCCChHHHHHHHHHHHc----CCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCc
Q 006792 97 IDVFICTADPEKEPAIGVMNTVLSAMA----LDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (631)
Q Consensus 97 VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~----~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p 172 (631)
|+|+||+|| |++.++.+||.+.+. ++|+. +++|+|+|||+++... ..|
T Consensus 1 ~SIliP~~n---e~~~~l~~~l~~~~~~~~~~~~~~-~~eI~vldD~~d~~~~--~~~---------------------- 52 (254)
T cd04191 1 TAIVMPVYN---EDPARVFAGLRAMYESLAKTGLAD-HFDFFILSDTRDPDIW--LAE---------------------- 52 (254)
T ss_pred CEEEEeCCC---CCHHHHHHHHHHHHHHHHhcCCcC-ceEEEEECCCCChHHH--HHH----------------------
Confidence 799999999 888889999999875 67633 4999999999987321 111
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEE
Q 006792 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (631)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~ 252 (631)
+..+.++.+++ ...++++
T Consensus 53 ---------------------~~~~~~l~~~~-----------------------------------------~~~~~v~ 70 (254)
T cd04191 53 ---------------------EAAWLDLCEEL-----------------------------------------GAQGRIY 70 (254)
T ss_pred ---------------------HHHHHHHHHHh-----------------------------------------CCCCcEE
Confidence 00111111110 0124799
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CCCCCCceEEEccCcccccCC
Q 006792 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNIN 331 (631)
Q Consensus 253 yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~ 331 (631)
|++|+++ .|.||||||.++...+ +++|||+++|||++++ ||+|.+++.+|. ||+ +|+||+|+.+.|.+
T Consensus 71 ~~~r~~~----~g~Kag~l~~~~~~~~--~~~~~i~~~DaD~~~~-p~~l~~~v~~~~~~~~----vg~vq~~~~~~n~~ 139 (254)
T cd04191 71 YRRRREN----TGRKAGNIADFCRRWG--SRYDYMVVLDADSLMS-GDTIVRLVRRMEANPR----AGIIQTAPKLIGAE 139 (254)
T ss_pred EEEcCCC----CCccHHHHHHHHHHhC--CCCCEEEEEeCCCCCC-HHHHHHHHHHHHhCCC----EEEEeCCceeECCC
Confidence 9999885 5689999999998744 6889999999999998 999999999996 998 89999999998864
Q ss_pred ccChHHHH----HHHHHHHHHHHhhhcCC--cceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCC
Q 006792 332 KYDIYDGR----FRSAYCVQWQGMDGLKG--PVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANG 405 (631)
Q Consensus 332 ~~d~~~~~----~~~f~~~~~~g~d~~~~--~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~ 405 (631)
..+.+- ...|....+.|.+.|++ .+|+|+++++||+||.+++.
T Consensus 140 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~~~----------------------------- 188 (254)
T cd04191 140 --TLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEHCA----------------------------- 188 (254)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHhcC-----------------------------
Confidence 233322 23344556777776644 47899999999999976420
Q ss_pred CCcchhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCe-eEeecCCCHHHHhhhhh
Q 006792 406 ENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQ-FLGTSTTNLNDLLIQGT 484 (631)
Q Consensus 406 ~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~-~~g~aP~tl~~~~~Qr~ 484 (631)
.+ .-|.-+||..++++||+++|++++.+||+++|.+. +. +++++|+|++++++||.
T Consensus 189 ------------------~~---~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~--~~~~~~~~p~~~~~~~~qr~ 245 (254)
T cd04191 189 ------------------LP---VLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPD--LEGSYEECPPTLIDFLKRDR 245 (254)
T ss_pred ------------------Cc---cccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccC--CcceEeECCCCHHHHHHHHH
Confidence 00 00112579889999999999999999999999973 44 68999999999999999
Q ss_pred hhhhhhhH
Q 006792 485 RWGSGLTD 492 (631)
Q Consensus 485 RWa~G~~q 492 (631)
||++|++|
T Consensus 246 RW~~G~~q 253 (254)
T cd04191 246 RWCQGNLQ 253 (254)
T ss_pred HHHhhcCc
Confidence 99999987
No 18
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=100.00 E-value=8.8e-36 Score=328.82 Aligned_cols=285 Identities=17% Similarity=0.181 Sum_probs=197.8
Q ss_pred CCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCC
Q 006792 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (631)
Q Consensus 92 ~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~ 171 (631)
+..|.|+|+||+|| |+ +.+.+||.|+++++||.++++|+|+|||++|.|.+.+.++.+
T Consensus 46 ~~~P~vsVIIP~yN---e~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~------------------ 103 (439)
T TIGR03111 46 GKLPDITIIIPVYN---SE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQN------------------ 103 (439)
T ss_pred CCCCCEEEEEEeCC---Ch-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHH------------------
Confidence 56899999999999 55 699999999999999999999999999999988654333210
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcE
Q 006792 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (631)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l 251 (631)
..|++
T Consensus 104 ---------------------------------------------------------------------------~~~~v 108 (439)
T TIGR03111 104 ---------------------------------------------------------------------------EFPGL 108 (439)
T ss_pred ---------------------------------------------------------------------------hCCCe
Confidence 01222
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CCCCCCceEEEccCcccccC
Q 006792 252 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNI 330 (631)
Q Consensus 252 ~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~ 330 (631)
..+..++ ++|||+|+|.|++. +++|||+++|||++++ ||+|++++..|. ||+++...|.+.........
T Consensus 109 ~v~~~~~-----~~Gka~AlN~gl~~----s~g~~v~~~DaD~~~~-~d~L~~l~~~f~~~~~v~~v~g~~~~~~~~~~~ 178 (439)
T TIGR03111 109 SLRYMNS-----DQGKAKALNAAIYN----SIGKYIIHIDSDGKLH-KDAIKNMVTRFENNPDIHAMTGVILTDKELIEK 178 (439)
T ss_pred EEEEeCC-----CCCHHHHHHHHHHH----ccCCEEEEECCCCCcC-hHHHHHHHHHHHhCCCeEEEEeEEecCchhhhh
Confidence 2222222 36899999999999 8899999999999996 999999999886 78744333333221110000
Q ss_pred Ccc--ChHHHHHHHHHHHHH-----HHhhh-cCCcc-eeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcc
Q 006792 331 NKY--DIYDGRFRSAYCVQW-----QGMDG-LKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQN 401 (631)
Q Consensus 331 ~~~--d~~~~~~~~f~~~~~-----~g~d~-~~~~~-~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~ 401 (631)
..+ ..+.... .+++... +...+ .+..+ .+|+++++||+++.++
T Consensus 179 ~~~~~~~~~~~~-~~~~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~~v--------------------------- 230 (439)
T TIGR03111 179 TKGRFLKLIRRC-EYFEYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETILKT--------------------------- 230 (439)
T ss_pred hcchhhhHhHHh-HHHHHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHHHHh---------------------------
Confidence 000 0011111 1122111 11222 22332 4577778999999765
Q ss_pred cCCCCCcchhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHh-cCCeEEEeCCCCCeeEeecCCCHHHHh
Q 006792 402 NANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHC-KGWTSTYLTPFRPQFLGTSTTNLNDLL 480 (631)
Q Consensus 402 ~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~-~Gwrs~y~~~~~~~~~g~aP~tl~~~~ 480 (631)
|||+.++++||++++++++. .|+++.|++ ++.++.++|+|+++++
T Consensus 231 --------------------------------ggf~~~~i~ED~~l~~rl~~~~g~kv~~~~--~a~~~~~~p~t~~~~~ 276 (439)
T TIGR03111 231 --------------------------------QLYNSETVGEDTDMTFQIRELLDGKVYLCE--NAIFYVDPIDGLNKLY 276 (439)
T ss_pred --------------------------------CCCCCCCcCccHHHHHHHHHhcCCeEEECC--CCEEEEECCcCHHHHH
Confidence 78999999999999999975 599999987 5899999999999999
Q ss_pred hhhhhhhhhhhHHHHhhcCCcccCCCCCCHHHHHHhhhhhHhhHHhHHHHHHHHHHHHHHHHcCCccc
Q 006792 481 IQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLY 548 (631)
Q Consensus 481 ~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~~~ 548 (631)
+||.||++|.+|++....++.... ...+.+++.+....... ...+|..++.++++++.+.|.++.
T Consensus 277 ~QR~RW~rG~~qv~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 277 TQRQRWQRGELEVSHMFFESANKS--IKGFFSNFMVRRIMYDH-TFAFPRMIWYFAMIFLIFLGYPVK 341 (439)
T ss_pred HHHHHHhccHHHHHHHHHhhhhhc--hhhhhhHHHHHHHHhhH-hhHHHHHHHHHHHHHHHHhccHHH
Confidence 999999999999997543333222 23455555443322222 446777777778887777775544
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=1.2e-32 Score=306.09 Aligned_cols=260 Identities=16% Similarity=0.099 Sum_probs=181.3
Q ss_pred CCCCceEEEEeccCCCCCChHHHHHHHHHHH-cCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccC
Q 006792 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAM-ALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (631)
Q Consensus 92 ~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l-~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r 170 (631)
...|.|+|+||+|| |. .+|.+||.+++ ++||| +++|+|+||+++|.|.+.+.+.++
T Consensus 63 ~~~p~vaIlIPA~N---E~-~vI~~~l~s~L~~ldY~--~~eIiVv~d~ndd~T~~~v~~l~~----------------- 119 (504)
T PRK14716 63 VPEKRIAIFVPAWR---EA-DVIGRMLEHNLATLDYE--NYRIFVGTYPNDPATLREVDRLAA----------------- 119 (504)
T ss_pred CCCCceEEEEeccC---ch-hHHHHHHHHHHHcCCCC--CeEEEEEECCCChhHHHHHHHHHH-----------------
Confidence 34899999999999 55 59999999965 68997 599999999999988754433210
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCc
Q 006792 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (631)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~ 250 (631)
.| |+
T Consensus 120 ---------------------------------------------------~~-------------------------p~ 123 (504)
T PRK14716 120 ---------------------------------------------------RY-------------------------PR 123 (504)
T ss_pred ---------------------------------------------------HC-------------------------CC
Confidence 01 33
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcC--CCCCC---CEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCc
Q 006792 251 LVYVSREKRPEHLHHFKAGALNVLLRVSG--VISNS---PYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQ 325 (631)
Q Consensus 251 l~yv~Rekrpg~~~~~KAgALN~~l~~s~--~~t~g---~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq 325 (631)
++.+. .+++| ..+||+|||.+++... ....| |+|+++|||++++ |++|+....++.|+ ++||.|.
T Consensus 124 v~~vv-~~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~-Pd~Lr~~~~~~~~~------~~VQ~pv 193 (504)
T PRK14716 124 VHLVI-VPHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIH-PLELRLYNYLLPRH------DFVQLPV 193 (504)
T ss_pred eEEEE-eCCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcC-ccHHHHHHhhcCCC------CEEecce
Confidence 33222 22233 3589999999997621 00234 9999999999997 99998766555444 4789997
Q ss_pred ccccCCccChHHHHHH-HH---HHHHHHHhhhcCCcc-eeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhc
Q 006792 326 KFHNINKYDIYDGRFR-SA---YCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQ 400 (631)
Q Consensus 326 ~f~n~~~~d~~~~~~~-~f---~~~~~~g~d~~~~~~-~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~ 400 (631)
...+.+.+...+.... .| +...+..++.+++++ ++|+|+++||++|..+..
T Consensus 194 ~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~l~~------------------------ 249 (504)
T PRK14716 194 FSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALERLAA------------------------ 249 (504)
T ss_pred eccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHHHHHh------------------------
Confidence 6655432222222111 12 222345567788775 789999999999986510
Q ss_pred ccCCCCCcchhhHHhhcccccccccccccccccc-cccCCcccchHHHHHHHHhcCCeEEEeCCCCCe------------
Q 006792 401 NNANGENFSNVLQEETGVLASCSYEHQTKWGEEV-GILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQ------------ 467 (631)
Q Consensus 401 ~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~-G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~------------ 467 (631)
+. .| +|+.+++|||+++|++++.+|||++|++. +.
T Consensus 250 --------------~~----------------GG~~fd~~sLTED~dLglRL~~~G~rv~y~p~--ai~~~~~~~~~~~~ 297 (504)
T PRK14716 250 --------------ER----------------GGQPFDSDSLTEDYDIGLRLKRAGFRQIFVRV--RADDTTDRPDRRGE 297 (504)
T ss_pred --------------hc----------------CCCCCCCCCcchHHHHHHHHHHCCCEEEEecc--cccccccccccccc
Confidence 00 03 39999999999999999999999999973 42
Q ss_pred ---eEeecCCCHHHHhhhhhhhhhhh-hHHHHhhcCCcccC--CCCCCHHHHHHhhh
Q 006792 468 ---FLGTSTTNLNDLLIQGTRWGSGL-TDVGLSRFCPLLYG--PSRMSLLQSMCYGE 518 (631)
Q Consensus 468 ---~~g~aP~tl~~~~~Qr~RWa~G~-~qi~~~~~~p~~~~--~~~l~~~qrl~y~~ 518 (631)
.++++|+|++++++||.||+.|. +|...+. -+... .+.+.+++|.+.+.
T Consensus 298 ~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~--gw~~~~~~~~~~~rdr~~~~~ 352 (504)
T PRK14716 298 PIATREFFPDTFKAAVRQKARWIYGIAFQGWERL--GWKGPAATKYMLWRDRKGLLT 352 (504)
T ss_pred cccccccCccCHHHHHHHHHHHHhchHHhhHHhc--CCCCchhhhhhHHHHHHHHHH
Confidence 45889999999999999999996 7876421 11111 11245677776554
No 20
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=100.00 E-value=2.9e-32 Score=273.73 Aligned_cols=227 Identities=25% Similarity=0.328 Sum_probs=176.2
Q ss_pred CceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccc
Q 006792 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (631)
Q Consensus 95 P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (631)
|+|+|+||+|| |. +.+.++|.|+++++||.++++|+|+|| ++|.|.+.+.+...
T Consensus 1 p~vSViIp~yN---e~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~--------------------- 54 (232)
T cd06437 1 PMVTVQLPVFN---EK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIVE--------------------- 54 (232)
T ss_pred CceEEEEecCC---cH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHHH---------------------
Confidence 68999999999 55 689999999999999998999999998 88888764433210
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEE
Q 006792 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (631)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv 254 (631)
++.. .-+++.++
T Consensus 55 -------------------------~~~~-------------------------------------------~~~~i~~~ 66 (232)
T cd06437 55 -------------------------EYAA-------------------------------------------QGVNIKHV 66 (232)
T ss_pred -------------------------HHhh-------------------------------------------cCCceEEE
Confidence 0000 01246677
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccC
Q 006792 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYD 334 (631)
Q Consensus 255 ~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d 334 (631)
.+.++ +++|++|+|.|++. ++||||+++|||+++. |++|.+++.++.||+ +++||.+..+.|.+. .
T Consensus 67 ~~~~~----~G~k~~a~n~g~~~----a~~~~i~~~DaD~~~~-~~~l~~~~~~~~~~~----v~~v~~~~~~~~~~~-~ 132 (232)
T cd06437 67 RRADR----TGYKAGALAEGMKV----AKGEYVAIFDADFVPP-PDFLQKTPPYFADPK----LGFVQTRWGHINANY-S 132 (232)
T ss_pred ECCCC----CCCchHHHHHHHHh----CCCCEEEEEcCCCCCC-hHHHHHhhhhhcCCC----eEEEecceeeEcCCC-c
Confidence 66553 45799999999999 8999999999999997 999999888888887 788988776655322 1
Q ss_pred hHHH----HHHHHHHHHHHHhhhcCCc-ceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcc
Q 006792 335 IYDG----RFRSAYCVQWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFS 409 (631)
Q Consensus 335 ~~~~----~~~~f~~~~~~g~d~~~~~-~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~ 409 (631)
.+.. ....++...+.+....+.. .++|+++++||+++..+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~v----------------------------------- 177 (232)
T cd06437 133 LLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGVWRKECIEDA----------------------------------- 177 (232)
T ss_pred hhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchhhhhHHHHHHh-----------------------------------
Confidence 1111 1112333334444333333 35799999999999765
Q ss_pred hhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhhhhhhh
Q 006792 410 NVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 489 (631)
Q Consensus 410 ~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G 489 (631)
|||+.....||+++++|++.+||++.|++ ++.+++..|+|++++++||+||++|
T Consensus 178 ------------------------gg~~~~~~~ED~~l~~rl~~~G~~~~~~~--~~~v~~~~~~~~~~~~~q~~rW~~g 231 (232)
T cd06437 178 ------------------------GGWNHDTLTEDLDLSYRAQLKGWKFVYLD--DVVVPAELPASMSAYRSQQHRWSKG 231 (232)
T ss_pred ------------------------CCCCCCcchhhHHHHHHHHHCCCeEEEec--cceeeeeCCcCHHHHHHHHHHhccC
Confidence 68988888999999999999999999998 6899999999999999999999998
Q ss_pred h
Q 006792 490 L 490 (631)
Q Consensus 490 ~ 490 (631)
.
T Consensus 232 ~ 232 (232)
T cd06437 232 P 232 (232)
T ss_pred C
Confidence 4
No 21
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.98 E-value=1.8e-31 Score=266.06 Aligned_cols=229 Identities=36% Similarity=0.515 Sum_probs=184.0
Q ss_pred CceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccc
Q 006792 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (631)
Q Consensus 95 P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (631)
|.|+|+||+|| |+++.+++++.|+++++||.++++|+|+|||++|.|.+.+.+ . +.
T Consensus 1 p~vsviip~~n---~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~-~-------------~~------- 56 (234)
T cd06421 1 PTVDVFIPTYN---EPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAE-L-------------GV------- 56 (234)
T ss_pred CceEEEEecCC---CcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHH-h-------------hc-------
Confidence 78999999999 666789999999999999998899999999999976532211 0 00
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEE
Q 006792 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (631)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv 254 (631)
. .++.++
T Consensus 57 ------------------------------------------------------------------------~-~~~~~~ 63 (234)
T cd06421 57 ------------------------------------------------------------------------E-YGYRYL 63 (234)
T ss_pred ------------------------------------------------------------------------c-cCceEE
Confidence 0 024555
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcC-CCCCCceEEEccCcccccCCcc
Q 006792 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD-PKISSSLAFVQFPQKFHNINKY 333 (631)
Q Consensus 255 ~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~D-p~~g~~vg~VQ~pq~f~n~~~~ 333 (631)
.+++ +.++|++|+|.|++. +++|||+++|+|.+++ |++|.+++..|.+ |+ ++.|++++.+.+.+..
T Consensus 64 ~~~~----~~~~~~~~~n~~~~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~~----~~~v~~~~~~~~~~~~ 130 (234)
T cd06421 64 TRPD----NRHAKAGNLNNALAH----TTGDFVAILDADHVPT-PDFLRRTLGYFLDDPK----VALVQTPQFFYNPDPF 130 (234)
T ss_pred EeCC----CCCCcHHHHHHHHHh----CCCCEEEEEccccCcC-ccHHHHHHHHHhcCCC----eEEEecceEEecCCcc
Confidence 5554 357899999999999 8999999999999997 9999999999975 76 7889999887765432
Q ss_pred C----hHHHHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcc
Q 006792 334 D----IYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFS 409 (631)
Q Consensus 334 d----~~~~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~ 409 (631)
+ .+......++.....+...++...++|++.++||+++..+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~~i----------------------------------- 175 (234)
T cd06421 131 DWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREALDEI----------------------------------- 175 (234)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHHHHh-----------------------------------
Confidence 1 1122233444455555555566778899999999999865
Q ss_pred hhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhhhhhhh
Q 006792 410 NVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 489 (631)
Q Consensus 410 ~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G 489 (631)
+||+...+.||++++++++++||++.|.+ .+.+++..|.+++.+++|+.||.+|
T Consensus 176 ------------------------g~~~~~~~~eD~~l~~r~~~~g~~i~~~~--~~~~~~~~~~~~~~~~~q~~rw~~~ 229 (234)
T cd06421 176 ------------------------GGFPTDSVTEDLATSLRLHAKGWRSVYVP--EPLAAGLAPETLAAYIKQRLRWARG 229 (234)
T ss_pred ------------------------CCCCccceeccHHHHHHHHHcCceEEEec--CccccccCCccHHHHHHHHHHHhcC
Confidence 67887888999999999999999999998 4889999999999999999999999
Q ss_pred hhHHH
Q 006792 490 LTDVG 494 (631)
Q Consensus 490 ~~qi~ 494 (631)
.+|++
T Consensus 230 ~~~~~ 234 (234)
T cd06421 230 MLQIL 234 (234)
T ss_pred CeeeC
Confidence 98853
No 22
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.98 E-value=3.8e-30 Score=296.73 Aligned_cols=243 Identities=20% Similarity=0.236 Sum_probs=174.4
Q ss_pred CCCCCCCCCceEEEEeccCCCCCChHHHHHHHHHHH-cCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhh
Q 006792 87 RLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAM-ALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRY 165 (631)
Q Consensus 87 ~l~~~~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l-~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~ 165 (631)
.++ .+..|+|+|+||+|| |+ .++.+|+.+++ ++|||+ ++|+|++|++++.|.+.+.+.+ ++
T Consensus 56 ~l~-~~~~~~vsIlVPa~n---E~-~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~T~~~~~~l~----------~~- 117 (727)
T PRK11234 56 ELY-KPDEKPLAIMVPAWN---ET-GVIGNMAELAATTLDYEN--YHIFVGTYPNDPATQADVDAVC----------AR- 117 (727)
T ss_pred hcc-cCCCCCEEEEEecCc---ch-hhHHHHHHHHHHhCCCCC--eEEEEEecCCChhHHHHHHHHH----------HH-
Confidence 344 356799999999999 55 69999999987 799997 9999999888887765333211 11
Q ss_pred CCccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccc
Q 006792 166 GIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADL 245 (631)
Q Consensus 166 ~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~ 245 (631)
T Consensus 118 -------------------------------------------------------------------------------- 117 (727)
T PRK11234 118 -------------------------------------------------------------------------------- 117 (727)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCC-----CCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEE
Q 006792 246 VEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVI-----SNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAF 320 (631)
Q Consensus 246 ~~~P~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~-----t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~ 320 (631)
+|++..+.-++ +| .++||+|||.++...-.. ...++++++|||.+++ ||+|+ .+.++.+++ ++
T Consensus 118 --~p~~~~v~~~~-~g--~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~-pd~L~-~~~~l~~~~-----~~ 185 (727)
T PRK11234 118 --FPNVHKVVCAR-PG--PTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVIS-PMELR-LFNYLVERK-----DL 185 (727)
T ss_pred --CCCcEEEEeCC-CC--CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCC-hhHHH-HHHhhcCCC-----Ce
Confidence 12232222121 33 468999999999873100 2346788899999997 99997 677887764 58
Q ss_pred EccCcccccCCccChHHHHHHHHH----HHHHHHhhhcCCcc-eeeeeeee-eh--hhhccccCcchhhhhhcCchHHHH
Q 006792 321 VQFPQKFHNINKYDIYDGRFRSAY----CVQWQGMDGLKGPV-LSGTGYYI-KR--ESLYADFTHTELKDTFGKSNVLIN 392 (631)
Q Consensus 321 VQ~pq~f~n~~~~d~~~~~~~~f~----~~~~~g~d~~~~~~-~~Gsg~~~-RR--~AL~~~~~~~~~~~~fg~~~~~~~ 392 (631)
||.|....+.+.+...+..+...| ...+.+++.+++++ +.|+|++| || ++|.+++
T Consensus 186 VQ~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~al~~~g----------------- 248 (727)
T PRK11234 186 IQIPVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALLEDG----------------- 248 (727)
T ss_pred EeecccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccHHHHHHhc-----------------
Confidence 999966433322223333333333 34567888887775 68999999 55 3454431
Q ss_pred hHhhhhhcccCCCCCcchhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCC--------
Q 006792 393 SLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPF-------- 464 (631)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~-------- 464 (631)
...+|+.+++|||+++|++|+.+||+++|++..
T Consensus 249 ---------------------------------------gg~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~v~~~~~~~ 289 (727)
T PRK11234 249 ---------------------------------------DGIAFDVQSLTEDYDIGFRLKEKGMREIFVRFPVVDEAKER 289 (727)
T ss_pred ---------------------------------------CCCCcCCCcchHHHHHHHHHHHCCCEEEEcccccccccccc
Confidence 002699999999999999999999999999810
Q ss_pred --C-----------CeeEeecCCCHHHHhhhhhhhhhh-hhHHHH
Q 006792 465 --R-----------PQFLGTSTTNLNDLLIQGTRWGSG-LTDVGL 495 (631)
Q Consensus 465 --~-----------~~~~g~aP~tl~~~~~Qr~RWa~G-~~qi~~ 495 (631)
+ .++++..|+|+++.++||.||.+| .+|.+.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~ 334 (727)
T PRK11234 290 EQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFK 334 (727)
T ss_pred cccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHH
Confidence 1 348899999999999999999999 577764
No 23
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.97 E-value=7.6e-31 Score=265.64 Aligned_cols=230 Identities=23% Similarity=0.287 Sum_probs=178.2
Q ss_pred CceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccc
Q 006792 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (631)
Q Consensus 95 P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (631)
|.|+|+||+|| |+ +.+.+||.|+++++||.++++|+|+|||++|.|.+.+.+.. .
T Consensus 1 p~vsIiIp~~N---e~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~--------------~------- 55 (241)
T cd06427 1 PVYTILVPLYK---EA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALR--------------L------- 55 (241)
T ss_pred CeEEEEEecCC---cH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhc--------------c-------
Confidence 78999999999 65 68999999999999998889999999999998764322100 0
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEE
Q 006792 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (631)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv 254 (631)
+ ...+++++
T Consensus 56 -------------------------------------------------~----------------------~~~~i~~~ 64 (241)
T cd06427 56 -------------------------------------------------P----------------------SIFRVVVV 64 (241)
T ss_pred -------------------------------------------------C----------------------CCeeEEEe
Confidence 0 00124444
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc--CCCCCCceEEEccCcccccCCc
Q 006792 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL--DPKISSSLAFVQFPQKFHNINK 332 (631)
Q Consensus 255 ~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~--Dp~~g~~vg~VQ~pq~f~n~~~ 332 (631)
...+ ..||++|+|.|++. ++||||+++|+|++++ |++|.+++.+|. +++ +++||.+..+.|...
T Consensus 65 ~~~~-----~~G~~~a~n~g~~~----a~gd~i~~~DaD~~~~-~~~l~~~~~~~~~~~~~----v~~~~~~~~~~~~~~ 130 (241)
T cd06427 65 PPSQ-----PRTKPKACNYALAF----ARGEYVVIYDAEDAPD-PDQLKKAVAAFARLDDK----LACVQAPLNYYNARE 130 (241)
T ss_pred cCCC-----CCchHHHHHHHHHh----cCCCEEEEEcCCCCCC-hHHHHHHHHHHHhcCCC----EEEEeCceEeeCCCc
Confidence 3322 35899999999999 8999999999999997 999999999886 244 788998877765421
Q ss_pred cChHHH----HHHHHHHHHHHHhhhcCCcc-eeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCC
Q 006792 333 YDIYDG----RFRSAYCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGEN 407 (631)
Q Consensus 333 ~d~~~~----~~~~f~~~~~~g~d~~~~~~-~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~ 407 (631)
..... .....+.....+....+... ++|++.++||+++..+
T Consensus 131 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~v--------------------------------- 176 (241)
T cd06427 131 -NWLTRMFALEYAAWFDYLLPGLARLGLPIPLGGTSNHFRTDVLREL--------------------------------- 176 (241)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCchHHhhHHHHHHc---------------------------------
Confidence 11111 11223444455555555554 4688889999999865
Q ss_pred cchhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhhhhh
Q 006792 408 FSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWG 487 (631)
Q Consensus 408 ~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa 487 (631)
|||+....+||+++++|++.+||++.+++ ..+++..|+|++++++||.||+
T Consensus 177 --------------------------gg~~~~~~~eD~~l~~rl~~~G~r~~~~~---~~~~~~~~~~~~~~~~q~~Rw~ 227 (241)
T cd06427 177 --------------------------GGWDPFNVTEDADLGLRLARAGYRTGVLN---STTLEEANNALGNWIRQRSRWI 227 (241)
T ss_pred --------------------------CCCCcccchhhHHHHHHHHHCCceEEEec---ccccccCcHhHHHHHHHHHHHh
Confidence 68887788999999999999999999996 3567899999999999999999
Q ss_pred hhhhHHHHhh
Q 006792 488 SGLTDVGLSR 497 (631)
Q Consensus 488 ~G~~qi~~~~ 497 (631)
+|.+|++..+
T Consensus 228 ~g~~~~~~~~ 237 (241)
T cd06427 228 KGYMQTWLVH 237 (241)
T ss_pred ccHHHHHHHH
Confidence 9999999753
No 24
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.97 E-value=4.4e-30 Score=257.72 Aligned_cols=231 Identities=23% Similarity=0.305 Sum_probs=173.7
Q ss_pred EEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCcccccc
Q 006792 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (631)
Q Consensus 98 dV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (631)
+|+||+|| |+++.+.+++.|+++++||. ++|+|+|||++|.|.....+. +|++++
T Consensus 1 siiip~~n---e~~~~l~~~l~sl~~q~~~~--~eiiVvdd~s~D~t~~~~i~~---------~~~~~~----------- 55 (236)
T cd06435 1 SIHVPCYE---EPPEMVKETLDSLAALDYPN--FEVIVIDNNTKDEALWKPVEA---------HCAQLG----------- 55 (236)
T ss_pred CeeEeeCC---CcHHHHHHHHHHHHhCCCCC--cEEEEEeCCCCchhHHHHHHH---------HHHHhC-----------
Confidence 58999999 76679999999999999996 899999999999875211110 011100
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEecc
Q 006792 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (631)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Re 257 (631)
+++.++..+
T Consensus 56 -----------------------------------------------------------------------~~i~~i~~~ 64 (236)
T cd06435 56 -----------------------------------------------------------------------ERFRFFHVE 64 (236)
T ss_pred -----------------------------------------------------------------------CcEEEEEcC
Confidence 135566555
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccChHH
Q 006792 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYD 337 (631)
Q Consensus 258 krpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~ 337 (631)
++ .++|++|+|.|++.+. .++|+|+++|+|.++. |++|.+++..|.+|+ +++|+++..+.+.. ...+.
T Consensus 65 ~~----~G~~~~a~n~g~~~a~--~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~~~~~~~~-~~~~~ 132 (236)
T cd06435 65 PL----PGAKAGALNYALERTA--PDAEIIAVIDADYQVE-PDWLKRLVPIFDDPR----VGFVQAPQDYRDGE-ESLFK 132 (236)
T ss_pred CC----CCCchHHHHHHHHhcC--CCCCEEEEEcCCCCcC-HHHHHHHHHHhcCCC----eeEEecCccccCCC-ccHHH
Confidence 43 4579999999999843 3589999999999997 999999999998876 78898876554321 22222
Q ss_pred HHHHH----HHHHHHHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcchhhH
Q 006792 338 GRFRS----AYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQ 413 (631)
Q Consensus 338 ~~~~~----f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (631)
..... ++..........+...+.|+++++||+++..+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~i--------------------------------------- 173 (236)
T cd06435 133 RMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSALDDV--------------------------------------- 173 (236)
T ss_pred HHHhHHHHHHHHHHhccccccCceEEecceEEEEHHHHHHh---------------------------------------
Confidence 11111 11111112222334456788899999999865
Q ss_pred HhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhhhhhhhhhHH
Q 006792 414 EETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDV 493 (631)
Q Consensus 414 ~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi 493 (631)
|||+.....||++++++++++||++.|++ ++..+...|+|+.++++||.||++|.+|+
T Consensus 174 --------------------Ggf~~~~~~eD~dl~~r~~~~G~~~~~~~--~~~~~~~~~~~~~~~~~q~~rw~~g~~~~ 231 (236)
T cd06435 174 --------------------GGWDEWCITEDSELGLRMHEAGYIGVYVA--QSYGHGLIPDTFEAFKKQRFRWAYGAVQI 231 (236)
T ss_pred --------------------CCCCCccccchHHHHHHHHHCCcEEEEcc--hhhccCcCcccHHHHHHHHHHHhcchhhh
Confidence 68888888999999999999999999997 47889999999999999999999999999
Q ss_pred HHhh
Q 006792 494 GLSR 497 (631)
Q Consensus 494 ~~~~ 497 (631)
+.+|
T Consensus 232 ~~~~ 235 (236)
T cd06435 232 LKKH 235 (236)
T ss_pred hhcc
Confidence 8754
No 25
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.96 E-value=2.4e-30 Score=258.01 Aligned_cols=224 Identities=25% Similarity=0.287 Sum_probs=144.6
Q ss_pred CceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccc
Q 006792 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (631)
Q Consensus 95 P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (631)
|.|+|+||+|| |+ +.+.++|.|+++++||. ++|+|+||++++.|.+.+.+.+ .+
T Consensus 1 P~v~Vvip~~~---~~-~~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~~~~~~~~~----------~~---------- 54 (228)
T PF13641_consen 1 PRVSVVIPAYN---ED-DVLRRCLESLLAQDYPR--LEVVVVDDGSDDETAEILRALA----------AR---------- 54 (228)
T ss_dssp --EEEE--BSS----H-HHHHHHHHHHTTSHHHT--EEEEEEEE-SSS-GCTTHHHHH----------HT----------
T ss_pred CEEEEEEEecC---CH-HHHHHHHHHHHcCCCCC--eEEEEEECCCChHHHHHHHHHH----------HH----------
Confidence 78999999999 66 59999999999999964 9999999999997754332211 00
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEE
Q 006792 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (631)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv 254 (631)
+|. -++.++
T Consensus 55 ------------------------------------------------~~~-----------------------~~v~vi 63 (228)
T PF13641_consen 55 ------------------------------------------------YPR-----------------------VRVRVI 63 (228)
T ss_dssp ------------------------------------------------TGG------------------------GEEEE
T ss_pred ------------------------------------------------cCC-----------------------CceEEe
Confidence 000 035667
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccC
Q 006792 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYD 334 (631)
Q Consensus 255 ~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d 334 (631)
.+++++| ..+|++|+|.+++. +++|+|+++|+|++++ |++|.+++.+|.+|+ +++||++..+.+. +.
T Consensus 64 ~~~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~~~~-p~~l~~~~~~~~~~~----~~~v~~~~~~~~~--~~ 130 (228)
T PF13641_consen 64 RRPRNPG--PGGKARALNEALAA----ARGDYILFLDDDTVLD-PDWLERLLAAFADPG----VGAVGGPVFPDND--RN 130 (228)
T ss_dssp E----HH--HHHHHHHHHHHHHH-------SEEEEE-SSEEE--CHHHHHHHHHHHBSS------EEEEEEEETTC--CC
T ss_pred ecCCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCcEEC-HHHHHHHHHHHHhCC----CCeEeeeEeecCC--CC
Confidence 6655332 23799999999999 8899999999999996 999999999998887 7788877765542 21
Q ss_pred hHHHHHHHHHH----HHHHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcch
Q 006792 335 IYDGRFRSAYC----VQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSN 410 (631)
Q Consensus 335 ~~~~~~~~f~~----~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (631)
.+......++. ....+....+...++|+++++||+++.++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~~~~------------------------------------ 174 (228)
T PF13641_consen 131 WLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSALEEV------------------------------------ 174 (228)
T ss_dssp EEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHHHHH------------------------------------
T ss_pred HHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHHHHh------------------------------------
Confidence 11111111110 11222333444567899999999999765
Q ss_pred hhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhhhhhhh
Q 006792 411 VLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 489 (631)
Q Consensus 411 ~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G 489 (631)
|||+.....||.++++++.++||++.|++ ++.++...|.|++++++||.||++|
T Consensus 175 -----------------------g~fd~~~~~eD~~l~~r~~~~G~~~~~~~--~~~v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 175 -----------------------GGFDPFILGEDFDLCLRLRAAGWRIVYAP--DALVYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp ------------------------S--SSSSSHHHHHHHHHHHTT--EEEEE--EEEEEE--SSSTHHHHHHHHHHH--
T ss_pred -----------------------CCCCCCCcccHHHHHHHHHHCCCcEEEEC--CcEEEEeCCCCHHHHHHHHhccCcC
Confidence 68888888999999999999999999998 5889999999999999999999987
No 26
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.96 E-value=1.8e-27 Score=257.37 Aligned_cols=228 Identities=15% Similarity=0.156 Sum_probs=167.0
Q ss_pred CCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCC
Q 006792 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (631)
Q Consensus 92 ~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~ 171 (631)
+..|+|+|+||+|| |+ ..+.+||.|+++||||. +||+|+||+++|.|.+.+.+..
T Consensus 38 ~~~p~VSViiP~~n---ee-~~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~~iv~~~~------------------- 92 (373)
T TIGR03472 38 RAWPPVSVLKPLHG---DE-PELYENLASFCRQDYPG--FQMLFGVQDPDDPALAVVRRLR------------------- 92 (373)
T ss_pred CCCCCeEEEEECCC---CC-hhHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHHHHHHHHH-------------------
Confidence 44799999999999 55 47999999999999996 9999999999997764332210
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcE
Q 006792 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (631)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l 251 (631)
+. ||. .++
T Consensus 93 ---------------------------~~----------------------~p~-----------------------~~i 100 (373)
T TIGR03472 93 ---------------------------AD----------------------FPD-----------------------ADI 100 (373)
T ss_pred ---------------------------Hh----------------------CCC-----------------------Cce
Confidence 00 111 135
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCC
Q 006792 252 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNIN 331 (631)
Q Consensus 252 ~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~ 331 (631)
+++..+++.| .++|++|+|++++. +++|+|+++|||++++ ||+|++++..|.||+ ++.|+++.... +
T Consensus 101 ~~v~~~~~~G--~~~K~~~l~~~~~~----a~ge~i~~~DaD~~~~-p~~L~~lv~~~~~~~----v~~V~~~~~~~--~ 167 (373)
T TIGR03472 101 DLVIDARRHG--PNRKVSNLINMLPH----ARHDILVIADSDISVG-PDYLRQVVAPLADPD----VGLVTCLYRGR--P 167 (373)
T ss_pred EEEECCCCCC--CChHHHHHHHHHHh----ccCCEEEEECCCCCcC-hhHHHHHHHHhcCCC----cceEeccccCC--C
Confidence 5665444433 35799999999998 8999999999999997 999999999999988 66777754322 1
Q ss_pred ccChHHHHHHH-----HHHHHHHHhhhcCC-cceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCC
Q 006792 332 KYDIYDGRFRS-----AYCVQWQGMDGLKG-PVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANG 405 (631)
Q Consensus 332 ~~d~~~~~~~~-----f~~~~~~g~d~~~~-~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~ 405 (631)
.+..+..-... |+...... ...+. .++.|++.++||++++++
T Consensus 168 ~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~~a~RR~~l~~i------------------------------- 215 (373)
T TIGR03472 168 VPGFWSRLGAMGINHNFLPSVMVA-RALGRARFCFGATMALRRATLEAI------------------------------- 215 (373)
T ss_pred CCCHHHHHHHHHhhhhhhHHHHHH-HhccCCccccChhhheeHHHHHHc-------------------------------
Confidence 12222211111 11111111 12232 346788889999999876
Q ss_pred CCcchhhHHhhcccccccccccccccccccccC--CcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhh
Q 006792 406 ENFSNVLQEETGVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQG 483 (631)
Q Consensus 406 ~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~--~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr 483 (631)
|||+. ++++||++++.++.++||++.|.+ .+......|+|++++++||
T Consensus 216 ----------------------------GGf~~~~~~~~ED~~l~~~i~~~G~~v~~~~--~~v~~~~~~~s~~~~~~q~ 265 (373)
T TIGR03472 216 ----------------------------GGLAALAHHLADDYWLGELVRALGLRVVLAP--VVVDTDVHETSFATLLAHE 265 (373)
T ss_pred ----------------------------CChHHhcccchHHHHHHHHHHHcCCeEEecc--hhhhcCCCccCHHHHHHHH
Confidence 67764 578999999999999999999986 4677778889999999999
Q ss_pred hhhhhhhh
Q 006792 484 TRWGSGLT 491 (631)
Q Consensus 484 ~RWa~G~~ 491 (631)
.||++...
T Consensus 266 ~RW~r~~~ 273 (373)
T TIGR03472 266 LRWSRTIR 273 (373)
T ss_pred HHHHhhhh
Confidence 99986554
No 27
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.96 E-value=1.2e-28 Score=251.06 Aligned_cols=172 Identities=17% Similarity=0.033 Sum_probs=116.4
Q ss_pred HHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhh-cCCCCCCceEEEccCcccccCCccChHHHHHHHHHH---
Q 006792 270 ALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYC--- 345 (631)
Q Consensus 270 ALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f-~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~--- 345 (631)
++|.++.. +++|||+++|||++++ |++|++++.+| .||+ +|.|++.....|.. ...+..-+...|.
T Consensus 64 ~~~~~~~~----a~~e~i~~~DaD~~~~-~~~l~~l~~~~~~~p~----vg~v~g~~~~~~~~-~~~~~~~q~~ey~~~~ 133 (244)
T cd04190 64 YFCRVLFP----DDPEFILLVDADTKFD-PDSIVQLYKAMDKDPE----IGGVCGEIHPMGKK-QGPLVMYQVFEYAISH 133 (244)
T ss_pred HHHHHhhc----CCCCEEEEECCCCcCC-HhHHHHHHHHHHhCCC----EEEEEeeeEEcCCc-chhHHHhHheehhhhh
Confidence 45666666 8999999999999997 99999999988 5898 67788877665532 1222222221121
Q ss_pred H-HHHHhhhcCCc-ceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcchhhHHhhccccccc
Q 006792 346 V-QWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCS 423 (631)
Q Consensus 346 ~-~~~g~d~~~~~-~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ 423 (631)
. .....+..+.. +..|++++||+++|.+++.. ... ...|.
T Consensus 134 ~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~---------~~~-----------------------------~~~~~ 175 (244)
T cd04190 134 WLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGG---------KGP-----------------------------LLDYA 175 (244)
T ss_pred hhcccHHHcCCceEECCCceEEEEehhhcCCccc---------ccc-----------------------------chhhc
Confidence 1 11223333433 45788999999999876310 000 00001
Q ss_pred ccccccccccccccCCcccchHHHHHHHHhcCCeEEE--eCCCCCeeEeecCCCHHHHhhhhhhhhhhhhH
Q 006792 424 YEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTY--LTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTD 492 (631)
Q Consensus 424 ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y--~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~q 492 (631)
|..++.-. ..+....+++||.+++++|..+||++.| ++ ++.+++++|+|++++++||.||++|.+.
T Consensus 176 ~~~~~~~~-~~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~--~a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 176 YLTNTVDS-LHKKNNLDLGEDRILCTLLLKAGPKRKYLYVP--GAVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred cccCcccc-hHHHHHHhHhcccceeHHHhccCCccEEEEec--ccEEEEECCCCHHHHHHHhHhhhccccc
Confidence 11111000 0123345789999999999999999999 76 5899999999999999999999999864
No 28
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.95 E-value=4.1e-27 Score=231.04 Aligned_cols=193 Identities=16% Similarity=0.186 Sum_probs=153.8
Q ss_pred CceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccc
Q 006792 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (631)
Q Consensus 95 P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (631)
|.|+|+||+|| |. ..+.++|.|+++++||. ++|+|+|||++|.|.+.+.+.. ++
T Consensus 1 p~vsviip~~n---~~-~~l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~~~~~~~~----------~~---------- 54 (196)
T cd02520 1 PGVSILKPLCG---VD-PNLYENLESFFQQDYPK--YEILFCVQDEDDPAIPVVRKLI----------AK---------- 54 (196)
T ss_pred CCeEEEEecCC---CC-ccHHHHHHHHHhccCCC--eEEEEEeCCCcchHHHHHHHHH----------HH----------
Confidence 78999999999 44 35899999999999997 9999999999998764332211 00
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEE
Q 006792 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (631)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv 254 (631)
|+.+ ++.++
T Consensus 55 ------------------------------------------------~~~~-----------------------~~~~~ 63 (196)
T cd02520 55 ------------------------------------------------YPNV-----------------------DARLL 63 (196)
T ss_pred ------------------------------------------------CCCC-----------------------cEEEE
Confidence 1100 23444
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccC
Q 006792 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYD 334 (631)
Q Consensus 255 ~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d 334 (631)
..+++.| ..+|++|+|.|++. ++||+++++|+|+.+. |++|.+++..+.+|+ +++|++.
T Consensus 64 ~~~~~~g--~~~~~~~~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~---------- 122 (196)
T cd02520 64 IGGEKVG--INPKVNNLIKGYEE----ARYDILVISDSDISVP-PDYLRRMVAPLMDPG----VGLVTCL---------- 122 (196)
T ss_pred ecCCcCC--CCHhHHHHHHHHHh----CCCCEEEEECCCceEC-hhHHHHHHHHhhCCC----CCeEEee----------
Confidence 4443323 33689999999999 8999999999999996 999999999988887 4555432
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcchhhHH
Q 006792 335 IYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQE 414 (631)
Q Consensus 335 ~~~~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (631)
+..|+++++||+++..+
T Consensus 123 -----------------------~~~g~~~~~r~~~~~~~---------------------------------------- 139 (196)
T cd02520 123 -----------------------CAFGKSMALRREVLDAI---------------------------------------- 139 (196)
T ss_pred -----------------------cccCceeeeEHHHHHhc----------------------------------------
Confidence 46688999999999865
Q ss_pred hhcccccccccccccccccccccC--CcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhhhhhhh
Q 006792 415 ETGVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 489 (631)
Q Consensus 415 ~a~~~~~c~ye~~t~wg~e~G~~~--~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G 489 (631)
+||+. ..+.||+++++++..+||++.|++ ++.++...|.+++++++||.||++.
T Consensus 140 -------------------ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~--~~~~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 140 -------------------GGFEAFADYLAEDYFLGKLIWRLGYRVVLSP--YVVMQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred -------------------cChHHHhHHHHHHHHHHHHHHHcCCeEEEcc--hheeccCCcccHHHHHHHHHHHhcc
Confidence 56653 356899999999999999999997 4889999999999999999999874
No 29
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.94 E-value=6.2e-25 Score=251.08 Aligned_cols=236 Identities=17% Similarity=0.182 Sum_probs=166.9
Q ss_pred CCCCCceEEEEeccCCCCCChHHHHHHHHHHH-cCCCCCCceEEEE---EcCCCChhchHHHHHHHHhhhhhhhHHHhhC
Q 006792 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAM-ALDYPVDKLHVYL---SDDGGSPITLHGMREACRFAKWWLPFCRRYG 166 (631)
Q Consensus 91 ~~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l-~~dYP~~kl~V~V---~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~ 166 (631)
..+.|.|+|+||+|| |. ++|.+||.+++ ++|||. ++|+| .|||.+. +++.+.+
T Consensus 67 ~~~~~~vsIlVPa~n---E~-~VI~~~v~~ll~~ldYp~--~~I~v~~~~nD~~T~---~~~~~~~-------------- 123 (703)
T PRK15489 67 ERDEQPLAIMVPAWK---EY-DVIAKMIENMLATLDYRR--YVIFVGTYPNDAETI---TEVERMR-------------- 123 (703)
T ss_pred ccCCCceEEEEeCCC---cH-HHHHHHHHHHHhcCCCCC--eEEEEEecCCCccHH---HHHHHHh--------------
Confidence 356799999999999 55 69999999986 799995 89999 4777443 2221110
Q ss_pred CccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhcccc
Q 006792 167 IKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLV 246 (631)
Q Consensus 167 v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~ 246 (631)
.
T Consensus 124 -------------------------------------------------------------------------------~ 124 (703)
T PRK15489 124 -------------------------------------------------------------------------------R 124 (703)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred CCCcEEEEeccCCCCCCCCChHHHHHHHHHhc---CCCCCCCE--EEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEE
Q 006792 247 EMPLLVYVSREKRPEHLHHFKAGALNVLLRVS---GVISNSPY--ILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFV 321 (631)
Q Consensus 247 ~~P~l~yv~Rekrpg~~~~~KAgALN~~l~~s---~~~t~g~~--Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~V 321 (631)
.+|+++.|..+. + ...+||.|||.++... .....++| |+++|||.+++ |++|+. +.++.+.. .+|
T Consensus 125 ~~p~~~~v~~~~-~--gp~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~-P~~L~~-~~~~~~~~-----~~i 194 (703)
T PRK15489 125 RYKRLVRVEVPH-D--GPTCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVLH-PLELKY-FNYLLPRK-----DLV 194 (703)
T ss_pred cCCcEEEEEcCC-C--CCCCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCCC-hhHHHH-HHhhcCCc-----cee
Confidence 124455454432 2 2468999999999873 00113444 99999999997 999975 46665332 268
Q ss_pred ccCcccccCCccChHHH----HHHHHHHHHHHHhhhcCCcc-eeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhh
Q 006792 322 QFPQKFHNINKYDIYDG----RFRSAYCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQ 396 (631)
Q Consensus 322 Q~pq~f~n~~~~d~~~~----~~~~f~~~~~~g~d~~~~~~-~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~ 396 (631)
|.|-.-...+.+...+. +....+...+.++..+++++ ..|+|++|||++|..+-
T Consensus 195 Q~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~~l~--------------------- 253 (703)
T PRK15489 195 QLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRALLALM--------------------- 253 (703)
T ss_pred eeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCcceeeeHHHHHHHH---------------------
Confidence 88742222122233333 33444566678888888886 57999999999997540
Q ss_pred hhhcccCCCCCcchhhHHhhcccccccccccccccccc---cccCCcccchHHHHHHHHhcCCeEEEeCC----------
Q 006792 397 SYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEV---GILYQSVSEDLFTGFILHCKGWTSTYLTP---------- 463 (631)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~---G~~~~sltED~~t~~rl~~~Gwrs~y~~~---------- 463 (631)
+ ++ +|+.+|+|||+++|+||+++||++.|+--
T Consensus 254 -----------------~------------------~gg~~~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~~~~~~ 298 (703)
T PRK15489 254 -----------------K------------------ERGNQPFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFRVRRTS 298 (703)
T ss_pred -----------------H------------------hcCCCCCCCCCchHhHHHHHHHHHCCCceEEEEEeccccccccc
Confidence 0 12 58889999999999999999999999210
Q ss_pred -----------CCCeeEeecCCCHHHHhhhhhhhhhhhh-HHH
Q 006792 464 -----------FRPQFLGTSTTNLNDLLIQGTRWGSGLT-DVG 494 (631)
Q Consensus 464 -----------~~~~~~g~aP~tl~~~~~Qr~RWa~G~~-qi~ 494 (631)
...+.++..|.|+++.++||.||..|.. |-.
T Consensus 299 ~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~ 341 (703)
T PRK15489 299 WFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQGW 341 (703)
T ss_pred cccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhH
Confidence 1256778999999999999999999998 553
No 30
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.94 E-value=6.8e-26 Score=224.50 Aligned_cols=221 Identities=20% Similarity=0.219 Sum_probs=163.4
Q ss_pred EEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 006792 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (631)
Q Consensus 99 V~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (631)
|+||+|| |+ +.+.+||.|++.++||.++++|+|+|||++|.|.+.+.....
T Consensus 1 viip~~n---~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~------------------------- 51 (229)
T cd04192 1 VVIAARN---EA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAAA------------------------- 51 (229)
T ss_pred CEEEecC---cH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHHh-------------------------
Confidence 6899999 65 689999999999999998899999999999987642220000
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 006792 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (631)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (631)
...+++.++.++.
T Consensus 52 -------------------------------------------------------------------~~~~~v~~~~~~~ 64 (229)
T cd04192 52 -------------------------------------------------------------------KPNFQLKILNNSR 64 (229)
T ss_pred -------------------------------------------------------------------CCCcceEEeeccC
Confidence 0013455665442
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccChHHH
Q 006792 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDG 338 (631)
Q Consensus 259 rpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~ 338 (631)
+ ...+|+.|+|.|+.. +++|+|+++|+|+++. |++|.+++..|.++. .+.|+.+..+.. .+.+..
T Consensus 65 -~--~~~g~~~a~n~g~~~----~~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~~~~~~---~~~~~~ 129 (229)
T cd04192 65 -V--SISGKKNALTTAIKA----AKGDWIVTTDADCVVP-SNWLLTFVAFIQKEQ----IGLVAGPVIYFK---GKSLLA 129 (229)
T ss_pred -c--ccchhHHHHHHHHHH----hcCCEEEEECCCcccC-HHHHHHHHHHhhcCC----CcEEeeeeeecC---CccHHH
Confidence 1 247899999999999 8899999999999997 999999999887665 345666665541 121111
Q ss_pred HHHH----HHHHHHHHhhhcCCc-ceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcchhhH
Q 006792 339 RFRS----AYCVQWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQ 413 (631)
Q Consensus 339 ~~~~----f~~~~~~g~d~~~~~-~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (631)
.... +......+...++.+ .++|++.++||+++..+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~--------------------------------------- 170 (229)
T cd04192 130 KFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFFEV--------------------------------------- 170 (229)
T ss_pred HHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHHHHh---------------------------------------
Confidence 1111 111122223334444 45788889999999865
Q ss_pred HhhcccccccccccccccccccccC--CcccchHHHHHHHHhcCC-eEEEeCCCCCeeEeecCCCHHHHhhhhhhhhhh
Q 006792 414 EETGVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGW-TSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 489 (631)
Q Consensus 414 ~~a~~~~~c~ye~~t~wg~e~G~~~--~sltED~~t~~rl~~~Gw-rs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G 489 (631)
|||++ ...+||.++.+++.++|| ++.|++......+...|.+++++++||+||++|
T Consensus 171 --------------------ggf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 171 --------------------GGFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred --------------------cCCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 67864 466899999999999999 999885435788899999999999999999987
No 31
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.94 E-value=1.6e-25 Score=223.88 Aligned_cols=229 Identities=18% Similarity=0.147 Sum_probs=163.7
Q ss_pred ceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCcccc
Q 006792 96 AIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAY 175 (631)
Q Consensus 96 ~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~y 175 (631)
+|+|+||+|| |+++.+.+||.++.+++ | .+|+|+|||++|.|.+.+.+..
T Consensus 1 ~isVvIp~~n---e~~~~l~~~l~sl~~q~-~---~eiivvdd~s~d~~~~~l~~~~----------------------- 50 (235)
T cd06434 1 DVTVIIPVYD---EDPDVFRECLRSILRQK-P---LEIIVVTDGDDEPYLSILSQTV----------------------- 50 (235)
T ss_pred CeEEEEeecC---CChHHHHHHHHHHHhCC-C---CEEEEEeCCCChHHHHHHHhhc-----------------------
Confidence 4899999999 76679999999999999 4 7999999999997654321100
Q ss_pred cccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEe
Q 006792 176 FSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVS 255 (631)
Q Consensus 176 f~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~ 255 (631)
. .|.+.++.
T Consensus 51 ----------------------------------------------~-------------------------~~~~~v~~ 59 (235)
T cd06434 51 ----------------------------------------------K-------------------------YGGIFVIT 59 (235)
T ss_pred ----------------------------------------------c-------------------------CCcEEEEe
Confidence 0 01234443
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccCh
Q 006792 256 REKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDI 335 (631)
Q Consensus 256 Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~ 335 (631)
++ +++|++|+|.|++. +++|+|+++|+|.++. |++|.+++..|.||+ ++.|++.+...+.+ ...
T Consensus 60 -~~-----~~g~~~a~n~g~~~----a~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~~----v~~v~~~~~~~~~~-~~~ 123 (235)
T cd06434 60 -VP-----HPGKRRALAEGIRH----VTTDIVVLLDSDTVWP-PNALPEMLKPFEDPK----VGGVGTNQRILRPR-DSK 123 (235)
T ss_pred -cC-----CCChHHHHHHHHHH----hCCCEEEEECCCceeC-hhHHHHHHHhccCCC----EeEEcCceEeecCc-ccH
Confidence 32 46799999999999 8999999999999997 999999999998887 78888887776542 222
Q ss_pred HHHHHHHHHHH----HHHHhhhcCCc-ceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcch
Q 006792 336 YDGRFRSAYCV----QWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSN 410 (631)
Q Consensus 336 ~~~~~~~f~~~----~~~g~d~~~~~-~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (631)
+......++.. ........++. .+.|.+.++||+++...+...++..+++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~~~~~~~~~~------------------------- 178 (235)
T cd06434 124 WSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFLFLEEFTNETF------------------------- 178 (235)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhhhhHHHhhhhhh-------------------------
Confidence 22222222221 11222223332 2356666899999976532111110000
Q ss_pred hhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhhhhhhhh
Q 006792 411 VLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGL 490 (631)
Q Consensus 411 ~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~ 490 (631)
+|.. ....||.+++.+++++||+..|++ .+.++...|.|+.++++||.||++|.
T Consensus 179 -----------------------~~~~-~~~~eD~~l~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~q~~Rw~~~~ 232 (235)
T cd06434 179 -----------------------MGRR-LNAGDDRFLTRYVLSHGYKTVYQY--TSEAYTETPENYKKFLKQQLRWSRSN 232 (235)
T ss_pred -----------------------cCCC-CCcCchHHHHHHHHHCCCeEEEec--CCeEEEEcchhHHHHHHHhhhhhhcc
Confidence 2222 356899999999999999999998 47888899999999999999999997
Q ss_pred hH
Q 006792 491 TD 492 (631)
Q Consensus 491 ~q 492 (631)
.+
T Consensus 233 ~~ 234 (235)
T cd06434 233 WR 234 (235)
T ss_pred cC
Confidence 53
No 32
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.93 E-value=3.8e-25 Score=223.96 Aligned_cols=226 Identities=18% Similarity=0.213 Sum_probs=163.7
Q ss_pred CCCCCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCc
Q 006792 89 PEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIK 168 (631)
Q Consensus 89 ~~~~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~ 168 (631)
+..+..|+|+|+||+|| |+ ..+.++|.|+.+++||.++++|+|+|||++|.|.+.+.+
T Consensus 23 ~~~~~~~~isVvip~~n---~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~------------------ 80 (251)
T cd06439 23 PDPAYLPTVTIIIPAYN---EE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIARE------------------ 80 (251)
T ss_pred CCCCCCCEEEEEEecCC---cH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHH------------------
Confidence 34567899999999999 55 589999999999999988899999999999987532211
Q ss_pred cCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCC
Q 006792 169 TICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEM 248 (631)
Q Consensus 169 ~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~ 248 (631)
+.+ .
T Consensus 81 --------------------------------~~~-------------------------------------------~- 84 (251)
T cd06439 81 --------------------------------YAD-------------------------------------------K- 84 (251)
T ss_pred --------------------------------Hhh-------------------------------------------C-
Confidence 000 0
Q ss_pred CcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccc
Q 006792 249 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFH 328 (631)
Q Consensus 249 P~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~ 328 (631)
++.++..++ +.+|++|+|.|++. +++|+|+++|+|++++ |++|.+++..+.+++ +++|++.....
T Consensus 85 -~v~~i~~~~-----~~g~~~a~n~gi~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~~~~~ 149 (251)
T cd06439 85 -GVKLLRFPE-----RRGKAAALNRALAL----ATGEIVVFTDANALLD-PDALRLLVRHFADPS----VGAVSGELVIV 149 (251)
T ss_pred -cEEEEEcCC-----CCChHHHHHHHHHH----cCCCEEEEEccccCcC-HHHHHHHHHHhcCCC----ccEEEeEEEec
Confidence 144454443 35799999999999 8899999999999998 999999999998776 55666655444
Q ss_pred cCCccChHHHH-HHHHHHHHHHHhhhcCCc-ceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCC
Q 006792 329 NINKYDIYDGR-FRSAYCVQWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGE 406 (631)
Q Consensus 329 n~~~~d~~~~~-~~~f~~~~~~g~d~~~~~-~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~ 406 (631)
+.+. ...... ...+...........+.. ...|++.++||+++.
T Consensus 150 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~---------------------------------- 194 (251)
T cd06439 150 DGGG-SGSGEGLYWKYENWLKRAESRLGSTVGANGAIYAIRRELFR---------------------------------- 194 (251)
T ss_pred CCcc-cchhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhHHHHhc----------------------------------
Confidence 3221 011111 111111111111112222 233444458888774
Q ss_pred CcchhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhhhh
Q 006792 407 NFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRW 486 (631)
Q Consensus 407 ~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RW 486 (631)
||+.....||.+++.++..+||++.|.+ .+..+...|.+..++++|+.||
T Consensus 195 ----------------------------~~~~~~~~eD~~l~~~~~~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~ 244 (251)
T cd06439 195 ----------------------------PLPADTINDDFVLPLRIARQGYRVVYEP--DAVAYEEVAEDGSEEFRRRVRI 244 (251)
T ss_pred ----------------------------CCCcccchhHHHHHHHHHHcCCeEEecc--ccEEEEeCcccHHHHHHHHHHH
Confidence 3444556799999999999999999997 5889999999999999999999
Q ss_pred hhhhhH
Q 006792 487 GSGLTD 492 (631)
Q Consensus 487 a~G~~q 492 (631)
+.|.+|
T Consensus 245 ~~g~~~ 250 (251)
T cd06439 245 AAGNLQ 250 (251)
T ss_pred Hhcccc
Confidence 999987
No 33
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.92 E-value=1.1e-22 Score=221.04 Aligned_cols=230 Identities=19% Similarity=0.125 Sum_probs=156.8
Q ss_pred CCCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccC
Q 006792 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (631)
Q Consensus 91 ~~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r 170 (631)
++..|+|+|+||+|| |+ +.+.+|+.|+++++||. ++||+|+||||+|.|.+.+.+..+
T Consensus 36 ~~~~p~VSVIIpa~N---e~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~~~~----------------- 93 (384)
T TIGR03469 36 PEAWPAVVAVVPARN---EA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARAAAR----------------- 93 (384)
T ss_pred CCCCCCEEEEEecCC---cH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHHHHH-----------------
Confidence 457899999999999 55 68999999999999996 499999999999988643322110
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCc
Q 006792 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (631)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~ 250 (631)
. +| ..++
T Consensus 94 -----------------------------~----------------------~~----------------------~~~~ 100 (384)
T TIGR03469 94 -----------------------------A----------------------YG----------------------RGDR 100 (384)
T ss_pred -----------------------------h----------------------cC----------------------CCCc
Confidence 0 00 0014
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCC-----CCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCc
Q 006792 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISN-----SPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQ 325 (631)
Q Consensus 251 l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~-----g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq 325 (631)
+.++..+.+|. ...+|+.|+|.|++. +. +|+|+++|+|+.++ |++|++++..+.+++. ++|....
T Consensus 101 i~vi~~~~~~~-g~~Gk~~A~n~g~~~----A~~~~~~gd~llflDaD~~~~-p~~l~~lv~~~~~~~~----~~vs~~~ 170 (384)
T TIGR03469 101 LTVVSGQPLPP-GWSGKLWAVSQGIAA----ARTLAPPADYLLLTDADIAHG-PDNLARLVARARAEGL----DLVSLMV 170 (384)
T ss_pred EEEecCCCCCC-CCcchHHHHHHHHHH----HhccCCCCCEEEEECCCCCCC-hhHHHHHHHHHHhCCC----CEEEecc
Confidence 55554433221 246899999999999 55 99999999999997 9999999999886653 3343322
Q ss_pred ccccCCccChHHHHH----HHHHHHHH---HHhhhcC-CcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhh
Q 006792 326 KFHNINKYDIYDGRF----RSAYCVQW---QGMDGLK-GPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQS 397 (631)
Q Consensus 326 ~f~n~~~~d~~~~~~----~~f~~~~~---~g~d~~~-~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~ 397 (631)
++.. ...+.... ..++.... ...+... .....|++.++||++++++
T Consensus 171 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~~~v----------------------- 224 (384)
T TIGR03469 171 RLRC---ESFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAAAAGGCILIRREALERI----------------------- 224 (384)
T ss_pred cccC---CCHHHHHHHHHHHHHHHHhcchhhhcCCCccceeecceEEEEEHHHHHHc-----------------------
Confidence 2221 12221111 11111110 0111111 1234688889999999876
Q ss_pred hhcccCCCCCcchhhHHhhcccccccccccccccccccccC--CcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCC
Q 006792 398 YKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTN 475 (631)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~--~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~t 475 (631)
|||+. ..+.||++++.++.++|+++.+... ........-.+
T Consensus 225 ------------------------------------GGf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~-~~~~s~r~~~~ 267 (384)
T TIGR03469 225 ------------------------------------GGIAAIRGALIDDCTLAAAVKRSGGRIWLGLA-ARTRSLRPYDG 267 (384)
T ss_pred ------------------------------------CCHHHHhhCcccHHHHHHHHHHcCCcEEEEec-CceEEEEecCC
Confidence 57764 4678999999999999999999864 23333344568
Q ss_pred HHHHhhhhhhhhh
Q 006792 476 LNDLLIQGTRWGS 488 (631)
Q Consensus 476 l~~~~~Qr~RWa~ 488 (631)
+++.++|+.||..
T Consensus 268 ~~~~~~~~~r~~~ 280 (384)
T TIGR03469 268 LGEIWRMIARTAY 280 (384)
T ss_pred HHHHHHHHHHhHH
Confidence 9999999999943
No 34
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.90 E-value=3.2e-22 Score=200.70 Aligned_cols=226 Identities=15% Similarity=0.087 Sum_probs=161.8
Q ss_pred ceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCcccc
Q 006792 96 AIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAY 175 (631)
Q Consensus 96 ~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~y 175 (631)
.|+|+||+|| |+ +.+.+++.++.+++||..+++|+|+|||++|.|.+.+.+..
T Consensus 1 ~~sIiip~~n---~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~----------------------- 53 (249)
T cd02525 1 FVSIIIPVRN---EE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYA----------------------- 53 (249)
T ss_pred CEEEEEEcCC---ch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHH-----------------------
Confidence 4899999999 65 57899999999999997789999999999997753222100
Q ss_pred cccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEe
Q 006792 176 FSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVS 255 (631)
Q Consensus 176 f~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~ 255 (631)
+ ..|.+.++.
T Consensus 54 --------------------------~--------------------------------------------~~~~v~~i~ 63 (249)
T cd02525 54 --------------------------A--------------------------------------------KDPRIRLID 63 (249)
T ss_pred --------------------------h--------------------------------------------cCCeEEEEe
Confidence 0 013466665
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccCh
Q 006792 256 REKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDI 335 (631)
Q Consensus 256 Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~ 335 (631)
.+ ++++++|+|.|++. +++|+|+++|+|.++. |++|.+++.++.++.. ..|+.+....+ .+.
T Consensus 64 ~~------~~~~~~a~N~g~~~----a~~d~v~~lD~D~~~~-~~~l~~~~~~~~~~~~----~~v~~~~~~~~---~~~ 125 (249)
T cd02525 64 NP------KRIQSAGLNIGIRN----SRGDIIIRVDAHAVYP-KDYILELVEALKRTGA----DNVGGPMETIG---ESK 125 (249)
T ss_pred CC------CCCchHHHHHHHHH----hCCCEEEEECCCccCC-HHHHHHHHHHHhcCCC----CEEecceecCC---CCh
Confidence 32 24689999999999 8999999999999996 9999999988887653 33444332221 122
Q ss_pred HHHHHHHHH----HHHHHHhhhcC---CcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCc
Q 006792 336 YDGRFRSAY----CVQWQGMDGLK---GPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENF 408 (631)
Q Consensus 336 ~~~~~~~f~----~~~~~g~d~~~---~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~ 408 (631)
........+ ........... .....|.+.++||+++..+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------- 171 (249)
T cd02525 126 FQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVFEKV---------------------------------- 171 (249)
T ss_pred HHHHHHHHhhchhccCCccccccccccccccccccceEEHHHHHHh----------------------------------
Confidence 211111111 11000011111 2245677778999988754
Q ss_pred chhhHHhhcccccccccccccccccccccCC-cccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhhhhh
Q 006792 409 SNVLQEETGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWG 487 (631)
Q Consensus 409 ~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~-sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa 487 (631)
+||+.. ...||.+++++++++|+++.|++ ++.+....|.+++.+.+|+.||+
T Consensus 172 -------------------------g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~--~~~~~~~~~~s~~~~~~~~~r~~ 224 (249)
T cd02525 172 -------------------------GGFDESLVRNEDAELNYRLRKAGYKIWLSP--DIRVYYYPRSTLKKLARQYFRYG 224 (249)
T ss_pred -------------------------CCCCcccCccchhHHHHHHHHcCcEEEEcC--CeEEEEcCCCCHHHHHHHHHHHh
Confidence 455543 34699999999999999999998 47888889999999999999999
Q ss_pred hhhhHHHHhh
Q 006792 488 SGLTDVGLSR 497 (631)
Q Consensus 488 ~G~~qi~~~~ 497 (631)
.|..|....+
T Consensus 225 ~~~~~~~~~~ 234 (249)
T cd02525 225 KWRARTLRKH 234 (249)
T ss_pred hhhHHHHHhC
Confidence 9999998753
No 35
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.85 E-value=1.5e-20 Score=184.30 Aligned_cols=167 Identities=17% Similarity=0.111 Sum_probs=121.5
Q ss_pred EEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 006792 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (631)
Q Consensus 99 V~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (631)
|+||+|| |+ ..+.+||.|+++++ | +++|+|+||||+|.|.+.+. ..
T Consensus 1 ViIp~~N---e~-~~l~~~l~sl~~~~-~--~~eIivvdd~S~D~t~~~~~--~~------------------------- 46 (191)
T cd06436 1 VLVPCLN---EE-AVIQRTLASLLRNK-P--NFLVLVIDDASDDDTAGIVR--LA------------------------- 46 (191)
T ss_pred CEEeccc---cH-HHHHHHHHHHHhCC-C--CeEEEEEECCCCcCHHHHHh--he-------------------------
Confidence 6899999 55 69999999999999 6 48999999999998864221 00
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 006792 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (631)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (631)
...|++.++.++.
T Consensus 47 -------------------------------------------------------------------~~~~~v~~i~~~~ 59 (191)
T cd06436 47 -------------------------------------------------------------------ITDSRVHLLRRHL 59 (191)
T ss_pred -------------------------------------------------------------------ecCCcEEEEeccC
Confidence 0012466665532
Q ss_pred CCCCCCCChHHHHHHHHHhcC-------CCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCC
Q 006792 259 RPEHLHHFKAGALNVLLRVSG-------VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNIN 331 (631)
Q Consensus 259 rpg~~~~~KAgALN~~l~~s~-------~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~ 331 (631)
. + .+.+|++|+|.|++.+. .-.++|+|+++|+|+++. |++|.+++.+|.||+ ++.||.+..+.|.+
T Consensus 60 ~-~-~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~-~~~l~~~~~~~~~~~----v~~v~~~~~~~~~~ 132 (191)
T cd06436 60 P-N-ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRLD-PNALEAVAPYFSDPR----VAGTQSRVRMYNRH 132 (191)
T ss_pred C-c-CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCcC-HhHHHHHHHhhcCCc----eEEEeeeEEEecCC
Confidence 1 1 24689999999999831 001358999999999997 999999888888998 77899998887753
Q ss_pred ccChHHHHH----HHHHHHHHHHhhhcCCcceeeeeeeeehhhhccc
Q 006792 332 KYDIYDGRF----RSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYAD 374 (631)
Q Consensus 332 ~~d~~~~~~----~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~ 374 (631)
. ..+..-+ ..++..++.++...+...++|+|+++||++|.++
T Consensus 133 ~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l~~v 178 (191)
T cd06436 133 K-NLLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSALDGL 178 (191)
T ss_pred C-CHHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHHHHh
Confidence 2 2222222 2233456677776665567999999999999876
No 36
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.84 E-value=2.5e-18 Score=184.78 Aligned_cols=270 Identities=18% Similarity=0.182 Sum_probs=193.9
Q ss_pred CCceEEEEeccCCCCCChHHHHH----HHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCcc
Q 006792 94 LPAIDVFICTADPEKEPAIGVMN----TVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKT 169 (631)
Q Consensus 94 ~P~VdV~Ipt~n~~~Ep~~~v~~----Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~ 169 (631)
+-+-.|++|+|| |++.-|.. |.+|+.+-. -.+.+.++|+.|..+++- ++.|. +.|..+|++.+=+
T Consensus 143 ~hrTAilmPiyn---Ed~~rVfAgLrA~~eSla~Tg-~~~~FD~FVLSDs~dpdi--alAEq----~a~~~l~~e~~g~- 211 (736)
T COG2943 143 LHRTAILMPIYN---EDVNRVFAGLRATYESLAATG-HAEHFDFFVLSDSRDPDI--ALAEQ----KAWAELCRELGGE- 211 (736)
T ss_pred ccceeEEeeccc---cCHHHHHHHHHHHHHHHHhhC-CcccceEEEEcCCCCchh--hhhHH----HHHHHHHHHhCCC-
Confidence 446889999999 77765544 444444433 345799999999998853 34443 4455666654310
Q ss_pred CCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCC
Q 006792 170 ICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMP 249 (631)
Q Consensus 170 r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P 249 (631)
-
T Consensus 212 -------------------------------------------------------------------------------~ 212 (736)
T COG2943 212 -------------------------------------------------------------------------------G 212 (736)
T ss_pred -------------------------------------------------------------------------------C
Confidence 1
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CCCCCCceEEEccCcccc
Q 006792 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFH 328 (631)
Q Consensus 250 ~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~ 328 (631)
++-|-.|.+ |.+.||||+..-.+..| +.+++++++|||++.. +|.+-+++..|. ||+ .|.+|+-..-.
T Consensus 213 ~ifYRrRr~----n~~RKaGNIaDfcrRwG--~~Y~~MlVLDADSvMt-gd~lvrLv~~ME~~P~----aGlIQt~P~~~ 281 (736)
T COG2943 213 NIFYRRRRR----NVKRKAGNIADFCRRWG--SAYSYMLVLDADSVMT-GDCLVRLVRLMEANPD----AGLIQTSPKAS 281 (736)
T ss_pred ceeeehHhh----hhcccccCHHHHHHHhC--cccceEEEeecccccC-chHHHHHHHHHhhCCC----Cceeecchhhc
Confidence 355544443 45789999999999988 8999999999999997 999999999887 898 67999976655
Q ss_pred cCCccChHHHHHH----HHHHHHHHHhhhcCCc--ceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhccc
Q 006792 329 NINKYDIYDGRFR----SAYCVQWQGMDGLKGP--VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNN 402 (631)
Q Consensus 329 n~~~~d~~~~~~~----~f~~~~~~g~d~~~~~--~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~ 402 (631)
|. +..|+.-+. +|=-+...|..-|++. .|-|.|+++|.++..+-
T Consensus 282 gg--~TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~h---------------------------- 331 (736)
T COG2943 282 GG--DTLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIEH---------------------------- 331 (736)
T ss_pred Cc--chHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhHHh----------------------------
Confidence 43 345544332 2223455677777665 58899999999988542
Q ss_pred CCCCCcchhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhh
Q 006792 403 ANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQ 482 (631)
Q Consensus 403 ~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Q 482 (631)
|+...=. | ++.|.+..++.|+.-+-.|.+.||-+--.+. -.-.+++.|.|+-+++++
T Consensus 332 -------------------cgLp~Lp--G-~~pFgG~ilSHDfvEAALmRRaGW~v~ia~d-L~GSyEE~PpnLlD~l~R 388 (736)
T COG2943 332 -------------------CGLPPLP--G-RGPFGGHILSHDFVEAALMRRAGWGVWIAYD-LDGSYEELPPNLLDELKR 388 (736)
T ss_pred -------------------cCCCCCC--C-CCCCCccccchHHHHHHHHhhcCceEEEecc-CCCchhhCCchHHHHHhh
Confidence 1111000 1 2568888999999999999999998765543 468999999999999999
Q ss_pred hhhhhhhhhHHHHhhcCCcccCCCCCCHHHHHHhhhhhHhh
Q 006792 483 GTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFP 523 (631)
Q Consensus 483 r~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~ 523 (631)
-.||++|++|.+. ++.. +++.+..|+.++...+-+
T Consensus 389 DRRWC~GNLqh~r-----l~~~-~GlHwvsR~h~~tGVmsY 423 (736)
T COG2943 389 DRRWCHGNLQHFR-----LFLV-KGLHWVSRAHFLTGVMSY 423 (736)
T ss_pred hhHhhhcchhhce-----eecc-CCccHHHHHHHHHHHHHH
Confidence 9999999999763 2222 358888887776644433
No 37
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.84 E-value=2.2e-20 Score=181.15 Aligned_cols=162 Identities=20% Similarity=0.162 Sum_probs=113.1
Q ss_pred EEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 006792 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (631)
Q Consensus 99 V~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (631)
|+||+|| |+ +.+.+||.++++++||.++++|+|+||||+|.|.+.+.+ ++
T Consensus 1 VvIp~~n---e~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~~--------------~~------------ 50 (183)
T cd06438 1 ILIPAHN---EE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVARA--------------AG------------ 50 (183)
T ss_pred CEEeccc---hH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHHH--------------cC------------
Confidence 6899999 55 699999999999999988899999999999987531110 00
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 006792 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (631)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (631)
..++.+.+
T Consensus 51 ------------------------------------------------------------------------~~~~~~~~ 58 (183)
T cd06438 51 ------------------------------------------------------------------------ATVLERHD 58 (183)
T ss_pred ------------------------------------------------------------------------CeEEEeCC
Confidence 01122222
Q ss_pred CCCCCCCChHHHHHHHHHhcC-CCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccChHH
Q 006792 259 RPEHLHHFKAGALNVLLRVSG-VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYD 337 (631)
Q Consensus 259 rpg~~~~~KAgALN~~l~~s~-~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~ 337 (631)
. .+++|++|+|.|++.+. .-+++|+|+++|+|++++ |++|.+++..|.+.. ..||+.....+... ..+.
T Consensus 59 ~---~~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~~-p~~l~~l~~~~~~~~-----~~v~g~~~~~~~~~-~~~~ 128 (183)
T cd06438 59 P---ERRGKGYALDFGFRHLLNLADDPDAVVVFDADNLVD-PNALEELNARFAAGA-----RVVQAYYNSKNPDD-SWIT 128 (183)
T ss_pred C---CCCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCCC-hhHHHHHHHHHhhCC-----CeeEEEEeeeCCcc-CHHH
Confidence 1 24689999999998731 014699999999999997 999999999886432 35676655554321 2222
Q ss_pred HHHH----HHHHHHHHHhhhcCCc-ceeeeeeeeehhhhc
Q 006792 338 GRFR----SAYCVQWQGMDGLKGP-VLSGTGYYIKRESLY 372 (631)
Q Consensus 338 ~~~~----~f~~~~~~g~d~~~~~-~~~Gsg~~~RR~AL~ 372 (631)
.... .++.....+...+++. .+.|+|.++||+++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~ 168 (183)
T cd06438 129 RLYAFAFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVLR 168 (183)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHHH
Confidence 2222 2233344566666665 468999999999996
No 38
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.80 E-value=8.5e-19 Score=171.04 Aligned_cols=193 Identities=15% Similarity=0.126 Sum_probs=133.5
Q ss_pred CceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccc
Q 006792 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (631)
Q Consensus 95 P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (631)
|.|+|+||+|| |+.+.+.+||.|+++++||. ++|+|+|||++|.|...+.+.
T Consensus 1 p~vsiii~~~n---~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~~~~----------------------- 52 (202)
T cd04184 1 PLISIVMPVYN---TPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRVLKK----------------------- 52 (202)
T ss_pred CeEEEEEeccc---CcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHHHHH-----------------------
Confidence 68999999999 55468999999999999986 899999999998654322221
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEE
Q 006792 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (631)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv 254 (631)
|.+ ..+++.++
T Consensus 53 --------------------------~~~-------------------------------------------~~~~~~~~ 63 (202)
T cd04184 53 --------------------------YAA-------------------------------------------QDPRIKVV 63 (202)
T ss_pred --------------------------HHh-------------------------------------------cCCCEEEE
Confidence 100 01235555
Q ss_pred eccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhh-cCCCCCCceEEEccCcccccCCcc
Q 006792 255 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKY 333 (631)
Q Consensus 255 ~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f-~Dp~~g~~vg~VQ~pq~f~n~~~~ 333 (631)
..++ +.+++.|+|.|++. +++|||+++|+|.++. |++|.+++..+ .+|+ +++|.........+.
T Consensus 64 ~~~~-----~~g~~~a~n~g~~~----a~~d~i~~ld~D~~~~-~~~l~~~~~~~~~~~~----~~~v~~~~~~~~~~~- 128 (202)
T cd04184 64 FREE-----NGGISAATNSALEL----ATGEFVALLDHDDELA-PHALYEVVKALNEHPD----ADLIYSDEDKIDEGG- 128 (202)
T ss_pred Eccc-----CCCHHHHHHHHHHh----hcCCEEEEECCCCcCC-hHHHHHHHHHHHhCCC----CCEEEccHHhccCCC-
Confidence 4443 46799999999999 8899999999999997 99999999988 6787 345544443322110
Q ss_pred ChHHHHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcchhhH
Q 006792 334 DIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQ 413 (631)
Q Consensus 334 d~~~~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (631)
.........-+. .+......+.|+++++||+++..+
T Consensus 129 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~r~~~~~i--------------------------------------- 164 (202)
T cd04184 129 KRSEPFFKPDWS-----PDLLLSQNYIGHLLVYRRSLVRQV--------------------------------------- 164 (202)
T ss_pred CEeccccCCCCC-----HHHhhhcCCccceEeEEHHHHHHh---------------------------------------
Confidence 000000000000 001112235577778999999865
Q ss_pred HhhcccccccccccccccccccccCC-cccchHHHHHHHHhcCCeEEEeCC
Q 006792 414 EETGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTP 463 (631)
Q Consensus 414 ~~a~~~~~c~ye~~t~wg~e~G~~~~-sltED~~t~~rl~~~Gwrs~y~~~ 463 (631)
|||+.+ ...||.++++|+..+||++.|+++
T Consensus 165 --------------------ggf~~~~~~~eD~~l~~rl~~~g~~~~~~~~ 195 (202)
T cd04184 165 --------------------GGFREGFEGAQDYDLVLRVSEHTDRIAHIPR 195 (202)
T ss_pred --------------------CCCCcCcccchhHHHHHHHHhccceEEEccH
Confidence 566654 357999999999999999999973
No 39
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.79 E-value=1.5e-18 Score=169.42 Aligned_cols=137 Identities=27% Similarity=0.390 Sum_probs=112.7
Q ss_pred EEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccChHHHHHHHHHHH----HHHHhhhcCCc-cee
Q 006792 286 YILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCV----QWQGMDGLKGP-VLS 360 (631)
Q Consensus 286 ~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~----~~~g~d~~~~~-~~~ 360 (631)
+|+++|+|+.+. ||++++++.++.||+ +++||+|..+.| .++.+.+.+..+|.. .....+..+.+ .+.
T Consensus 1 ~v~~~DaDt~~~-~d~l~~~~~~~~~~~----~~~vq~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (193)
T PF13632_consen 1 YVLFLDADTRLP-PDFLERLVAALEDPK----VDAVQGPIIFRN--RGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLS 73 (193)
T ss_pred CEEEEcCCCCCC-hHHHHHHHHHHhCCC----ceEEEccEEecC--CCChhheeehhhhhhhhhhhHHHHHhcCCCcccc
Confidence 589999999997 999999999998887 889999999864 334444444444421 12233344444 578
Q ss_pred eeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcchhhHHhhccccccccccccccccccccc-CC
Q 006792 361 GTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGIL-YQ 439 (631)
Q Consensus 361 Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~-~~ 439 (631)
|+|.++||+++.++ +||+ ..
T Consensus 74 G~~~~~r~~~l~~v-----------------------------------------------------------g~~~~~~ 94 (193)
T PF13632_consen 74 GSGMLFRREALREV-----------------------------------------------------------GGFDDPF 94 (193)
T ss_pred CcceeeeHHHHHHh-----------------------------------------------------------Ccccccc
Confidence 99999999999865 6898 88
Q ss_pred cccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhhhhhhhh
Q 006792 440 SVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGL 490 (631)
Q Consensus 440 sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~ 490 (631)
+++||+++++++.++||++.|++ ++.+++++|.|+.++++||+||..|.
T Consensus 95 ~~~ED~~l~~~l~~~G~~~~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 95 SIGEDMDLGFRLRRAGYRIVYVP--DAIVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred cccchHHHHHHHHHCCCEEEEec--ccceeeeCCCCHHHHHHHHHHHHhhh
Confidence 99999999999999999999998 46789999999999999999999997
No 40
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.78 E-value=3.2e-18 Score=167.09 Aligned_cols=189 Identities=17% Similarity=0.137 Sum_probs=131.8
Q ss_pred EEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCcccccc
Q 006792 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (631)
Q Consensus 98 dV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (631)
+|+||+||+ |+++.+.+||.|+++++||. .+|+|+|||+++++...+.+
T Consensus 1 sviip~~n~--~~~~~l~~~l~Sl~~q~~~~--~eiiivdd~ss~d~t~~~~~--------------------------- 49 (201)
T cd04195 1 SVLMSVYIK--EKPEFLREALESILKQTLPP--DEVVLVKDGPVTQSLNEVLE--------------------------- 49 (201)
T ss_pred CEEEEcccc--chHHHHHHHHHHHHhcCCCC--cEEEEEECCCCchhHHHHHH---------------------------
Confidence 589999993 44579999999999999995 79999999995543222211
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEecc
Q 006792 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (631)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Re 257 (631)
.|.+ ..| +.++..+
T Consensus 50 ----------------------~~~~-------------------------------------------~~~-i~~i~~~ 63 (201)
T cd04195 50 ----------------------EFKR-------------------------------------------KLP-LKVVPLE 63 (201)
T ss_pred ----------------------HHHh-------------------------------------------cCC-eEEEEcC
Confidence 0100 012 5666665
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CCCCCCceEEEccCcccccCCccChH
Q 006792 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKYDIY 336 (631)
Q Consensus 258 krpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~~~d~~ 336 (631)
++ .|+++|+|.|++. ++||||+++|+|.++. |++|.+++..|. +|+ +++|.+.....+.+.....
T Consensus 64 ~n-----~G~~~a~N~g~~~----a~gd~i~~lD~Dd~~~-~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 129 (201)
T cd04195 64 KN-----RGLGKALNEGLKH----CTYDWVARMDTDDISL-PDRFEKQLDFIEKNPE----IDIVGGGVLEFDSDGNDIG 129 (201)
T ss_pred cc-----ccHHHHHHHHHHh----cCCCEEEEeCCccccC-cHHHHHHHHHHHhCCC----eEEEcccEEEECCCCCeec
Confidence 43 5799999999999 8999999999999997 999999999886 666 5566655544332211111
Q ss_pred HH----HHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcchhh
Q 006792 337 DG----RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVL 412 (631)
Q Consensus 337 ~~----~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (631)
.. .....+... .....++|.+.++||+++..+
T Consensus 130 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~rr~~~~~~-------------------------------------- 165 (201)
T cd04195 130 KRRLPTSHDDILKFA------RRRSPFNHPTVMFRKSKVLAV-------------------------------------- 165 (201)
T ss_pred cccCCCCHHHHHHHh------ccCCCCCChHHhhhHHHHHHc--------------------------------------
Confidence 00 001111110 112224566678999988754
Q ss_pred HHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeC
Q 006792 413 QEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLT 462 (631)
Q Consensus 413 ~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~ 462 (631)
+||+.....||.++.+++..+|+++.|++
T Consensus 166 ---------------------g~~~~~~~~eD~~~~~r~~~~g~~~~~~~ 194 (201)
T cd04195 166 ---------------------GGYQDLPLVEDYALWARMLANGARFANLP 194 (201)
T ss_pred ---------------------CCcCCCCCchHHHHHHHHHHcCCceeccc
Confidence 57777788999999999999999999987
No 41
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.76 E-value=1.3e-17 Score=174.55 Aligned_cols=112 Identities=19% Similarity=0.082 Sum_probs=89.1
Q ss_pred EEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCcccccc
Q 006792 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (631)
Q Consensus 98 dV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (631)
+|+||+|| |+++.+.+||.|+++++||....||+|+||||+|.|.+.+.+..
T Consensus 1 SIIIp~~N---~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~------------------------- 52 (299)
T cd02510 1 SVIIIFHN---EALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEY------------------------- 52 (299)
T ss_pred CEEEEEec---CcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHH-------------------------
Confidence 58999999 66579999999999999987567999999999998764332200
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEecc
Q 006792 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (631)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Re 257 (631)
. ....|++.++..+
T Consensus 53 -----------------------~-------------------------------------------~~~~~~v~vi~~~ 66 (299)
T cd02510 53 -----------------------Y-------------------------------------------KKYLPKVKVLRLK 66 (299)
T ss_pred -----------------------H-------------------------------------------hhcCCcEEEEEcC
Confidence 0 0012456777655
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CCC
Q 006792 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPK 313 (631)
Q Consensus 258 krpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~ 313 (631)
+ +.|++.|.|.|++. ++||||+++|+|+.+. |++|.+++..+. +|.
T Consensus 67 ~-----n~G~~~a~N~g~~~----A~gd~i~fLD~D~~~~-~~wL~~ll~~l~~~~~ 113 (299)
T cd02510 67 K-----REGLIRARIAGARA----ATGDVLVFLDSHCEVN-VGWLEPLLARIAENRK 113 (299)
T ss_pred C-----CCCHHHHHHHHHHH----ccCCEEEEEeCCcccC-ccHHHHHHHHHHhCCC
Confidence 4 46899999999999 8999999999999997 999999999886 444
No 42
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.74 E-value=5.2e-16 Score=172.66 Aligned_cols=305 Identities=16% Similarity=0.158 Sum_probs=171.5
Q ss_pred CCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCC------ChhchHHHHHHHHhhhhhhhHHHhhC
Q 006792 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGG------SPITLHGMREACRFAKWWLPFCRRYG 166 (631)
Q Consensus 93 ~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~------~~~T~~~l~ea~~fa~~w~pfc~~~~ 166 (631)
.++.+=.+||+|| |..+.+++||.|+..++||..+.-+.|+-||- +..|.+.+.+..+ .+.
T Consensus 23 ~~~~~i~~v~cy~---E~~~~l~~tldsl~~~~y~~~~k~~~vi~DG~i~g~g~~~~tp~~~l~~~~----------~~~ 89 (527)
T PF03142_consen 23 PDKFVICLVPCYS---EGEEELRTTLDSLATTDYDDSRKLIFVICDGMIKGSGNDKTTPEIVLDILG----------DFV 89 (527)
T ss_pred CCceEEEEEcccc---CChHHHHHHHHHHHhcCCCCcccEEEEEcCcEEecCCCCCChHHHHHHhhc----------ccC
Confidence 3456777999999 66689999999999999998755577777753 3344444444321 000
Q ss_pred CccCCc--ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcch--hhhh
Q 006792 167 IKTICP--QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESE--TIRQ 242 (631)
Q Consensus 167 v~~r~p--~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~--~~~~ 242 (631)
..+..| ..|-|-.+.. ..-+..+|..+--...+ ....
T Consensus 90 ~~~~~~~~~~~~~~~~g~---------------------------------------~~~n~~~vy~g~y~~~~~~~~~~ 130 (527)
T PF03142_consen 90 DPPEDPEPLSYVSLGEGS---------------------------------------KQHNMAKVYSGFYEYDGDSHVPP 130 (527)
T ss_pred CCcCCCCCcceEEeccCc---------------------------------------hhhcCEEEEEEEEecCCcccccc
Confidence 111111 1121111000 00122333322211111 1111
Q ss_pred ccccCCCcEEEEe-------ccCCCCCCCCChHHHHHHHHHh------------------------cCC-CCCCCEEEEe
Q 006792 243 ADLVEMPLLVYVS-------REKRPEHLHHFKAGALNVLLRV------------------------SGV-ISNSPYILGL 290 (631)
Q Consensus 243 ~~~~~~P~l~yv~-------Rekrpg~~~~~KAgALN~~l~~------------------------s~~-~t~g~~Il~~ 290 (631)
..+.+.|-++.+- .+++|| ++||...+=-+++. .|. ....|||+.+
T Consensus 131 ~~~~~vp~~~vvk~g~~~e~~~~k~~--NrGKRDsq~~~~~fl~~~~~~~~~~~~~~e~~~~i~~~~g~~~~~~~~il~~ 208 (527)
T PF03142_consen 131 EKQQRVPYIVVVKCGTPSERSSPKPG--NRGKRDSQILLMSFLNKVHFNNPMTPLELELFHQIWNIIGVDPDFYEYILMV 208 (527)
T ss_pred ccccccCEEEEEEcCChHHhcccccc--cCCchHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhccCccceEEEEEe
Confidence 2345567666654 122355 56676654222211 121 2346999999
Q ss_pred CCCCCCCChHHHHHHHHhhc-CCCCCCceEEEccCcccccCCccChHHHHHHHHH---HHHHHHhhhcCCccee--eeee
Q 006792 291 DCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAY---CVQWQGMDGLKGPVLS--GTGY 364 (631)
Q Consensus 291 DaD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~---~~~~~g~d~~~~~~~~--Gsg~ 364 (631)
|||+.+. |+++.+++.-+. ||++++.+|.++ ..|.. ...+.--+...| ...+++.++.-|.+.| |.-+
T Consensus 209 DaDt~~~-p~~~~~lv~~m~~d~~i~gvCG~t~----i~n~~-~s~~t~~Q~fEY~ish~l~Ka~Es~fG~VtCLPGcfs 282 (527)
T PF03142_consen 209 DADTKFD-PDSVNRLVDAMERDPKIGGVCGETR----IDNKG-QSWWTMYQVFEYAISHHLQKAFESVFGSVTCLPGCFS 282 (527)
T ss_pred cCCceEc-HHHHHHHHHHHcCCCCeEEEeceeE----EcCCC-CCHhhheeccchhHHHHHHHHHHHHhCceeecCCcce
Confidence 9999997 999999999775 999776666543 23321 122211111112 2355666666666554 5555
Q ss_pred eeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcchhhHHhhcccccccccccccccccccc--cCCccc
Q 006792 365 YIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGI--LYQSVS 442 (631)
Q Consensus 365 ~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~--~~~slt 442 (631)
+||-+|+..-+. .++.-+ ...+++++ |..+.. ++=. .-..+.
T Consensus 283 myR~~a~~~~~~--~~~p~l-----------------------~~~~i~~~--------Y~~~~~---dtlh~~nl~~lG 326 (527)
T PF03142_consen 283 MYRISALMDGDG--YWVPLL-----------------------ISPDIIEK--------YSENPV---DTLHQKNLLDLG 326 (527)
T ss_pred eeeeehhccccc--cccccc-----------------------cchHHHHH--------Hhhccc---hHHHHHhhhhcc
Confidence 799999875210 000000 00001110 000000 0001 112578
Q ss_pred chHHHHHHHHhc--CCeEEEeCCCCCeeEeecCCCHHHHhhhhhhhhhhhhHHHH
Q 006792 443 EDLFTGFILHCK--GWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGL 495 (631)
Q Consensus 443 ED~~t~~rl~~~--Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~ 495 (631)
||-.++-.|.++ |||..|++ ++.+++.+|+|++.+++||+||..|.+-.++
T Consensus 327 EDR~LttLlLk~~~~~k~~y~~--~A~a~T~aP~t~~vflsQRRRWinSTi~Nl~ 379 (527)
T PF03142_consen 327 EDRWLTTLLLKQFPGYKTEYVP--SAVAYTDAPETFSVFLSQRRRWINSTIHNLF 379 (527)
T ss_pred hhHHHHHHHHhhCCCceEEEcc--cccccccCCccHHHHHHHhhhccchhHhhHh
Confidence 999999878777 89999998 5899999999999999999999999987654
No 43
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.74 E-value=4.2e-17 Score=157.38 Aligned_cols=186 Identities=18% Similarity=0.126 Sum_probs=127.7
Q ss_pred EEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCcccccc
Q 006792 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (631)
Q Consensus 98 dV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (631)
+|+||+|| ++ +.+.+++.|+.+++||. ++|+|+|||++|.|.+.+.+
T Consensus 1 sivi~~~n---~~-~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~~~~~~~--------------------------- 47 (202)
T cd06433 1 SIITPTYN---QA-ETLEETIDSVLSQTYPN--IEYIVIDGGSTDGTVDIIKK--------------------------- 47 (202)
T ss_pred CEEEeccc---hH-HHHHHHHHHHHhCCCCC--ceEEEEeCCCCccHHHHHHH---------------------------
Confidence 58999999 55 68999999999999986 99999999999977532211
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEecc
Q 006792 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (631)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Re 257 (631)
+.. .+.++..+
T Consensus 48 -----------------------~~~----------------------------------------------~~~~~~~~ 58 (202)
T cd06433 48 -----------------------YED----------------------------------------------KITYWISE 58 (202)
T ss_pred -----------------------hHh----------------------------------------------hcEEEEec
Confidence 000 01223333
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHH-hhcCCCCCCceEEEccCcccccCCccChH
Q 006792 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC-FHLDPKISSSLAFVQFPQKFHNINKYDIY 336 (631)
Q Consensus 258 krpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~-~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~ 336 (631)
+ ..++++|+|.|++. +++|||+++|+|.++. |+.+.+++. ...+++. ++|.+...+.+.+.....
T Consensus 59 ~-----~~g~~~a~n~~~~~----a~~~~v~~ld~D~~~~-~~~~~~~~~~~~~~~~~----~~v~g~~~~~~~~~~~~~ 124 (202)
T cd06433 59 P-----DKGIYDAMNKGIAL----ATGDIIGFLNSDDTLL-PGALLAVVAAFAEHPEV----DVVYGDVLLVDENGRVIG 124 (202)
T ss_pred C-----CcCHHHHHHHHHHH----cCCCEEEEeCCCcccC-chHHHHHHHHHHhCCCc----cEEEeeeEEEcCCCCccc
Confidence 3 35799999999999 8999999999999997 999999984 4457763 344444333322211110
Q ss_pred HHHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcchhhHHhh
Q 006792 337 DGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEET 416 (631)
Q Consensus 337 ~~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 416 (631)
... ...............+|++.++||+++..+
T Consensus 125 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------ 157 (202)
T cd06433 125 RRR-----PPPFLDKFLLYGMPICHQATFFRRSLFEKY------------------------------------------ 157 (202)
T ss_pred CCC-----CcchhhhHHhhcCcccCcceEEEHHHHHHh------------------------------------------
Confidence 000 000001112233456778889999999765
Q ss_pred cccccccccccccccccccccCC-cccchHHHHHHHHhcCCeEEEeCC
Q 006792 417 GVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTP 463 (631)
Q Consensus 417 ~~~~~c~ye~~t~wg~e~G~~~~-sltED~~t~~rl~~~Gwrs~y~~~ 463 (631)
+||+.+ ...||.++.+++..+|+++.|++.
T Consensus 158 -----------------~~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~ 188 (202)
T cd06433 158 -----------------GGFDESYRIAADYDLLLRLLLAGKIFKYLPE 188 (202)
T ss_pred -----------------CCCchhhCchhhHHHHHHHHHcCCceEecch
Confidence 345543 467999999999999999998873
No 44
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.73 E-value=1.5e-16 Score=157.39 Aligned_cols=178 Identities=17% Similarity=0.106 Sum_probs=122.6
Q ss_pred eEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccccc
Q 006792 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (631)
Q Consensus 97 VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (631)
|+|+||+|| |+ ..+.++|.|++++.|+ ..+|+|+|||++|.|.+.+.+
T Consensus 1 vsvii~~~n---~~-~~l~~~l~sl~~q~~~--~~evivvdd~s~d~~~~~~~~-------------------------- 48 (221)
T cd02522 1 LSIIIPTLN---EA-ENLPRLLASLRRLNPL--PLEIIVVDGGSTDGTVAIARS-------------------------- 48 (221)
T ss_pred CEEEEEccC---cH-HHHHHHHHHHHhccCC--CcEEEEEeCCCCccHHHHHhc--------------------------
Confidence 689999999 65 4799999999999995 489999999999976421100
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEec
Q 006792 177 SEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSR 256 (631)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~R 256 (631)
+++.++..
T Consensus 49 ------------------------------------------------------------------------~~~~~~~~ 56 (221)
T cd02522 49 ------------------------------------------------------------------------AGVVVISS 56 (221)
T ss_pred ------------------------------------------------------------------------CCeEEEeC
Confidence 12344432
Q ss_pred cCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccChH
Q 006792 257 EKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIY 336 (631)
Q Consensus 257 ekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~ 336 (631)
..+|++|+|.|+.. +++++|+++|+|.++. |+++.+++..+.++.. .++ .....+.+. +..
T Consensus 57 -------~~g~~~a~n~g~~~----a~~~~i~~~D~D~~~~-~~~l~~l~~~~~~~~~--~~~--~~~~~~~~~---~~~ 117 (221)
T cd02522 57 -------PKGRARQMNAGAAA----ARGDWLLFLHADTRLP-PDWDAAIIETLRADGA--VAG--AFRLRFDDP---GPR 117 (221)
T ss_pred -------CcCHHHHHHHHHHh----ccCCEEEEEcCCCCCC-hhHHHHHHHHhhcCCc--EEE--EEEeeecCC---ccc
Confidence 24699999999999 7899999999999997 9999998776665442 122 222222221 111
Q ss_pred HHHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcchhhHHhh
Q 006792 337 DGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEET 416 (631)
Q Consensus 337 ~~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 416 (631)
... ............+..+.++|.++||+++..+
T Consensus 118 ~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~------------------------------------------ 151 (221)
T cd02522 118 LRL----LELGANLRSRLFGLPYGDQGLFIRRELFEEL------------------------------------------ 151 (221)
T ss_pred hhh----hhhcccceecccCCCcCCceEEEEHHHHHHh------------------------------------------
Confidence 110 1111111111222334556778899988765
Q ss_pred cccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEE
Q 006792 417 GVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTY 460 (631)
Q Consensus 417 ~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y 460 (631)
|||++....||+++++++...|+++.+
T Consensus 152 -----------------G~fd~~~~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 152 -----------------GGFPELPLMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred -----------------CCCCccccccHHHHHHHHHhCCCEEEc
Confidence 678887789999999999999999877
No 45
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.73 E-value=2.9e-16 Score=159.47 Aligned_cols=203 Identities=12% Similarity=0.046 Sum_probs=126.6
Q ss_pred CCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCC
Q 006792 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (631)
Q Consensus 92 ~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~ 171 (631)
...|.|+|+||+|| |. ..+..++.++.....+...++|+|+||||+|.|.+.+.+.. +
T Consensus 6 ~~~~~vsVvIp~yn---e~-~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~----------~-------- 63 (243)
T PLN02726 6 EGAMKYSIIVPTYN---ER-LNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQ----------K-------- 63 (243)
T ss_pred CCCceEEEEEccCC---ch-hhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHH----------H--------
Confidence 34689999999999 44 46777777765432222259999999999998865332210 0
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcE
Q 006792 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (631)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l 251 (631)
.| + -+++
T Consensus 64 ----------------------------~~----------------------~-----------------------~~~v 70 (243)
T PLN02726 64 ----------------------------VY----------------------G-----------------------EDRI 70 (243)
T ss_pred ----------------------------hc----------------------C-----------------------CCcE
Confidence 00 0 0135
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCC
Q 006792 252 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNIN 331 (631)
Q Consensus 252 ~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~ 331 (631)
.++.+++ +.||++|+|.|++. ++||+|+++|+|..++ |++|.+++..+.+++. ++|.... +.+..
T Consensus 71 ~~~~~~~-----n~G~~~a~n~g~~~----a~g~~i~~lD~D~~~~-~~~l~~l~~~~~~~~~----~~v~g~r-~~~~~ 135 (243)
T PLN02726 71 LLRPRPG-----KLGLGTAYIHGLKH----ASGDFVVIMDADLSHH-PKYLPSFIKKQRETGA----DIVTGTR-YVKGG 135 (243)
T ss_pred EEEecCC-----CCCHHHHHHHHHHH----cCCCEEEEEcCCCCCC-HHHHHHHHHHHHhcCC----cEEEEcc-ccCCC
Confidence 5555443 35799999999999 8999999999999996 9999999998876552 3444332 22111
Q ss_pred c--cChHHHHH-HHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCc
Q 006792 332 K--YDIYDGRF-RSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENF 408 (631)
Q Consensus 332 ~--~d~~~~~~-~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~ 408 (631)
. +-.+.... ...+.....-..+.+..-.+|...++||+++..++.
T Consensus 136 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~d~~g~~~~~rr~~~~~i~~-------------------------------- 183 (243)
T PLN02726 136 GVHGWDLRRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKRSALEDLVS-------------------------------- 183 (243)
T ss_pred CcCCccHHHHHHHHHHHHHHHHHhCCCCCcCCCcccceeHHHHHHHHh--------------------------------
Confidence 1 10111111 111222211122222233455566899999986520
Q ss_pred chhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeC
Q 006792 409 SNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLT 462 (631)
Q Consensus 409 ~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~ 462 (631)
....+...+|+++.+++..+||++.+++
T Consensus 184 --------------------------~~~~~~~~~~~el~~~~~~~g~~i~~vp 211 (243)
T PLN02726 184 --------------------------SVVSKGYVFQMEIIVRASRKGYRIEEVP 211 (243)
T ss_pred --------------------------hccCCCcEEehHHHHHHHHcCCcEEEeC
Confidence 0111123568999999999999999987
No 46
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.71 E-value=1.9e-16 Score=155.23 Aligned_cols=193 Identities=17% Similarity=0.124 Sum_probs=129.7
Q ss_pred EEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCcccccc
Q 006792 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (631)
Q Consensus 98 dV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (631)
+|+||||| |+ ..+.++|.|+++++|| +++|+|+|||++|.|.+.+.+.+.
T Consensus 1 sIvIp~yn---~~-~~l~~~l~sl~~q~~~--~~eiiVvddgS~d~t~~~~~~~~~------------------------ 50 (214)
T cd04196 1 AVLMATYN---GE-KYLREQLDSILAQTYK--NDELIISDDGSTDGTVEIIKEYID------------------------ 50 (214)
T ss_pred CEEEEecC---cH-HHHHHHHHHHHhCcCC--CeEEEEEeCCCCCCcHHHHHHHHh------------------------
Confidence 58999999 55 6899999999999999 499999999999988643322110
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEecc
Q 006792 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (631)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Re 257 (631)
.|| +.+.++..+
T Consensus 51 --------------------------------------------~~~------------------------~~~~~~~~~ 62 (214)
T cd04196 51 --------------------------------------------KDP------------------------FIIILIRNG 62 (214)
T ss_pred --------------------------------------------cCC------------------------ceEEEEeCC
Confidence 011 123444444
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHh-hcCCCCCCceEEEccCcccccCCccChH
Q 006792 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF-HLDPKISSSLAFVQFPQKFHNINKYDIY 336 (631)
Q Consensus 258 krpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~-f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~ 336 (631)
+ ++|+++|+|.|+.. ++||||+++|+|.++. |+.|.+++.. +.+|. .+++.+.....+.+.. ..
T Consensus 63 ~-----~~G~~~~~n~g~~~----~~g~~v~~ld~Dd~~~-~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~ 127 (214)
T cd04196 63 K-----NLGVARNFESLLQA----ADGDYVFFCDQDDIWL-PDKLERLLKAFLKDDK----PLLVYSDLELVDENGN-PI 127 (214)
T ss_pred C-----CccHHHHHHHHHHh----CCCCEEEEECCCcccC-hhHHHHHHHHHhcCCC----ceEEecCcEEECCCCC-Cc
Confidence 3 47899999999999 8999999999999997 9999999998 45665 4556665443322211 11
Q ss_pred HHHHHHHHHH--HHHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcchhhHH
Q 006792 337 DGRFRSAYCV--QWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQE 414 (631)
Q Consensus 337 ~~~~~~f~~~--~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (631)
.......... ..............|+++++||+++..+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---------------------------------------- 167 (214)
T cd04196 128 GESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELLELA---------------------------------------- 167 (214)
T ss_pred ccccccccccCCccCHHHHHHhCccCCceeeEEHHHHHhh----------------------------------------
Confidence 0000000000 0000111123346788899999999765
Q ss_pred hhcccccccccccccccccccccCC-cccchHHHHHHHHhcCCeEEEeCC
Q 006792 415 ETGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTP 463 (631)
Q Consensus 415 ~a~~~~~c~ye~~t~wg~e~G~~~~-sltED~~t~~rl~~~Gwrs~y~~~ 463 (631)
++++.. ...||..+.+++.. |+++.|+++
T Consensus 168 -------------------~~~~~~~~~~~D~~~~~~~~~-~~~~~~~~~ 197 (214)
T cd04196 168 -------------------LPFPDADVIMHDWWLALLASA-FGKVVFLDE 197 (214)
T ss_pred -------------------ccccccccccchHHHHHHHHH-cCceEEcch
Confidence 355544 56799999998877 778888874
No 47
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.70 E-value=1.4e-15 Score=151.45 Aligned_cols=112 Identities=14% Similarity=0.102 Sum_probs=83.0
Q ss_pred EEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 006792 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (631)
Q Consensus 99 V~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (631)
|+||+|| ++ ..+.+||.|+++++||. .++|+|+||||+|.|.+.+.+-. .+
T Consensus 1 ViIp~yn---~~-~~l~~~l~sl~~q~~~~-~~eiiVvDd~S~d~t~~i~~~~~----------~~-------------- 51 (219)
T cd06913 1 IILPVHN---GE-QWLDECLESVLQQDFEG-TLELSVFNDASTDKSAEIIEKWR----------KK-------------- 51 (219)
T ss_pred CEEeecC---cH-HHHHHHHHHHHhCCCCC-CEEEEEEeCCCCccHHHHHHHHH----------Hh--------------
Confidence 6899999 44 69999999999999984 59999999999998864332200 00
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 006792 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (631)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (631)
+ ..+++.++..+.
T Consensus 52 ----------------------~---------------------------------------------~~~~~~~~~~~~ 64 (219)
T cd06913 52 ----------------------L---------------------------------------------EDSGVIVLVGSH 64 (219)
T ss_pred ----------------------C---------------------------------------------cccCeEEEEecc
Confidence 0 001344444332
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CC
Q 006792 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DP 312 (631)
Q Consensus 259 rpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp 312 (631)
+.+ .+.|.+.|+|.|++. ++||+|+++|+|.++. |+.+.+.+..+. +|
T Consensus 65 ~~~-~~~G~~~a~N~g~~~----a~gd~i~~lD~D~~~~-~~~l~~~~~~~~~~~ 113 (219)
T cd06913 65 NSP-SPKGVGYAKNQAIAQ----SSGRYLCFLDSDDVMM-PQRIRLQYEAALQHP 113 (219)
T ss_pred cCC-CCccHHHHHHHHHHh----cCCCEEEEECCCccCC-hhHHHHHHHHHHhCC
Confidence 211 246899999999999 8999999999999997 999988777665 44
No 48
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.69 E-value=1.1e-15 Score=151.45 Aligned_cols=108 Identities=17% Similarity=0.113 Sum_probs=83.9
Q ss_pred EEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 006792 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (631)
Q Consensus 99 V~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (631)
|+||+|| |+ ..+.++|.++.++.|+ ..++|+|+||||+|.|.+.+.+
T Consensus 1 ViIp~yn---~~-~~l~~~l~sl~~q~~~-~~~eiiiVDd~S~d~t~~~~~~---------------------------- 47 (224)
T cd06442 1 IIIPTYN---ER-ENIPELIERLDAALKG-IDYEIIVVDDNSPDGTAEIVRE---------------------------- 47 (224)
T ss_pred CeEeccc---hh-hhHHHHHHHHHHhhcC-CCeEEEEEeCCCCCChHHHHHH----------------------------
Confidence 6899999 55 5799999999999982 2499999999999987642211
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 006792 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (631)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (631)
|.+ ..|++.++..++
T Consensus 48 ----------------------~~~-------------------------------------------~~~~i~~~~~~~ 62 (224)
T cd06442 48 ----------------------LAK-------------------------------------------EYPRVRLIVRPG 62 (224)
T ss_pred ----------------------HHH-------------------------------------------hCCceEEEecCC
Confidence 000 012345555554
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCC
Q 006792 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKI 314 (631)
Q Consensus 259 rpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~ 314 (631)
+.|+++|+|.|++. +.||+|+++|+|..+. |++|.+++..+.+++.
T Consensus 63 -----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~~~ 108 (224)
T cd06442 63 -----KRGLGSAYIEGFKA----ARGDVIVVMDADLSHP-PEYIPELLEAQLEGGA 108 (224)
T ss_pred -----CCChHHHHHHHHHH----cCCCEEEEEECCCCCC-HHHHHHHHHHHhcCCC
Confidence 46799999999999 8899999999999997 9999999998776653
No 49
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.69 E-value=1e-15 Score=146.77 Aligned_cols=171 Identities=18% Similarity=0.099 Sum_probs=120.0
Q ss_pred EEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 006792 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (631)
Q Consensus 99 V~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (631)
|+||+|| |+ ..+.+||.|+++++|+. .+|+|+|||++|.|.+.+.+..
T Consensus 1 ivip~~n---~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~t~~~~~~~~-------------------------- 48 (182)
T cd06420 1 LIITTYN---RP-EALELVLKSVLNQSILP--FEVIIADDGSTEETKELIEEFK-------------------------- 48 (182)
T ss_pred CEEeecC---Ch-HHHHHHHHHHHhccCCC--CEEEEEeCCCchhHHHHHHHHH--------------------------
Confidence 6899999 66 68999999999999986 8999999999997753222110
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 006792 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (631)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (631)
+. . .. .+.++.+++
T Consensus 49 ------------------------~~-------------------~----------------------~~-~~~~~~~~~ 62 (182)
T cd06420 49 ------------------------SQ-------------------F----------------------PI-PIKHVWQED 62 (182)
T ss_pred ------------------------hh-------------------c----------------------CC-ceEEEEcCC
Confidence 00 0 00 133443332
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccChHHH
Q 006792 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDG 338 (631)
Q Consensus 259 rpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~ 338 (631)
...+|++|+|.|++. ++||+|+++|+|.++. |++|.+++..+ ++. ++ |..++...+.+...
T Consensus 63 ----~~~~~~~~~n~g~~~----a~g~~i~~lD~D~~~~-~~~l~~~~~~~-~~~----~~-v~g~~~~~~~~~~~---- 123 (182)
T cd06420 63 ----EGFRKAKIRNKAIAA----AKGDYLIFIDGDCIPH-PDFIADHIELA-EPG----VF-LSGSRVLLNEKLTE---- 123 (182)
T ss_pred ----cchhHHHHHHHHHHH----hcCCEEEEEcCCcccC-HHHHHHHHHHh-CCC----cE-Eecceeecccccce----
Confidence 134799999999999 8999999999999997 99999999877 554 33 33444333211100
Q ss_pred HHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcchhhHHhhcc
Q 006792 339 RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGV 418 (631)
Q Consensus 339 ~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 418 (631)
..+.|+++.++|+++..+
T Consensus 124 ------------------~~~~~~~~~~~r~~~~~~-------------------------------------------- 141 (182)
T cd06420 124 ------------------RGIRGCNMSFWKKDLLAV-------------------------------------------- 141 (182)
T ss_pred ------------------eEeccceEEEEHHHHHHh--------------------------------------------
Confidence 235577777888877654
Q ss_pred cccccccccccccccccccCCc---ccchHHHHHHHHhcCCeEEEeCC
Q 006792 419 LASCSYEHQTKWGEEVGILYQS---VSEDLFTGFILHCKGWTSTYLTP 463 (631)
Q Consensus 419 ~~~c~ye~~t~wg~e~G~~~~s---ltED~~t~~rl~~~Gwrs~y~~~ 463 (631)
|||+... -.||+++++|+.++|++..++.+
T Consensus 142 ---------------ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~ 174 (182)
T cd06420 142 ---------------NGFDEEFTGWGGEDSELVARLLNSGIKFRKLKF 174 (182)
T ss_pred ---------------CCCCcccccCCcchHHHHHHHHHcCCcEEEecc
Confidence 5665442 26999999999999977666653
No 50
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.69 E-value=6.2e-16 Score=144.74 Aligned_cols=156 Identities=19% Similarity=0.201 Sum_probs=121.8
Q ss_pred EEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 006792 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (631)
Q Consensus 99 V~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (631)
|+||+|| |+ ..+.+|+.|+.+++||. .+|+|+|||+++.|.+.+.+.
T Consensus 1 vii~~~~---~~-~~l~~~l~sl~~~~~~~--~~iiivdd~s~~~~~~~~~~~--------------------------- 47 (166)
T cd04186 1 IIIVNYN---SL-EYLKACLDSLLAQTYPD--FEVIVVDNASTDGSVELLREL--------------------------- 47 (166)
T ss_pred CEEEecC---CH-HHHHHHHHHHHhccCCC--eEEEEEECCCCchHHHHHHHh---------------------------
Confidence 6899999 64 79999999999999964 899999999999765322210
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 006792 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (631)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (631)
.+++.++..++
T Consensus 48 ---------------------------------------------------------------------~~~~~~~~~~~ 58 (166)
T cd04186 48 ---------------------------------------------------------------------FPEVRLIRNGE 58 (166)
T ss_pred ---------------------------------------------------------------------CCCeEEEecCC
Confidence 01244454443
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CCCCCCceEEEccCcccccCCccChHH
Q 006792 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKYDIYD 337 (631)
Q Consensus 259 rpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~~~d~~~ 337 (631)
+.++++|+|.+++. +++++|+++|+|.++. |+++.+++..+. +|+ ++++...
T Consensus 59 -----~~g~~~a~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~~~----~~~~~~~------------- 111 (166)
T cd04186 59 -----NLGFGAGNNQGIRE----AKGDYVLLLNPDTVVE-PGALLELLDAAEQDPD----VGIVGPK------------- 111 (166)
T ss_pred -----CcChHHHhhHHHhh----CCCCEEEEECCCcEEC-ccHHHHHHHHHHhCCC----ceEEEcc-------------
Confidence 46799999999999 7899999999999997 999999988655 555 4555332
Q ss_pred HHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcchhhHHhhc
Q 006792 338 GRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETG 417 (631)
Q Consensus 338 ~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 417 (631)
++|++.++||+++..+
T Consensus 112 ---------------------~~~~~~~~~~~~~~~~------------------------------------------- 127 (166)
T cd04186 112 ---------------------VSGAFLLVRREVFEEV------------------------------------------- 127 (166)
T ss_pred ---------------------CceeeEeeeHHHHHHc-------------------------------------------
Confidence 6788889999999765
Q ss_pred ccccccccccccccccccccCCc--ccchHHHHHHHHhcCCeEEEeCC
Q 006792 418 VLASCSYEHQTKWGEEVGILYQS--VSEDLFTGFILHCKGWTSTYLTP 463 (631)
Q Consensus 418 ~~~~c~ye~~t~wg~e~G~~~~s--ltED~~t~~rl~~~Gwrs~y~~~ 463 (631)
+||+... ..||.++++++..+||++.+++.
T Consensus 128 ----------------~~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~ 159 (166)
T cd04186 128 ----------------GGFDEDFFLYYEDVDLCLRARLAGYRVLYVPQ 159 (166)
T ss_pred ----------------CCCChhhhccccHHHHHHHHHHcCCeEEEccc
Confidence 4555432 45999999999999999999873
No 51
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.66 E-value=2.1e-15 Score=160.91 Aligned_cols=109 Identities=18% Similarity=0.220 Sum_probs=88.3
Q ss_pred CCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCcc
Q 006792 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQ 173 (631)
Q Consensus 94 ~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~ 173 (631)
.|.|+|+||+|| ++ ..+.+||.|+++++|+. +||+|+||||+|.|.+.+.+
T Consensus 5 ~p~vSVIIP~yN---~~-~~L~~~l~Sl~~Qt~~~--~EIIiVdDgStD~t~~i~~~----------------------- 55 (328)
T PRK10073 5 TPKLSIIIPLYN---AG-KDFRAFMESLIAQTWTA--LEIIIVNDGSTDNSVEIAKH----------------------- 55 (328)
T ss_pred CCeEEEEEeccC---CH-HHHHHHHHHHHhCCCCC--eEEEEEeCCCCccHHHHHHH-----------------------
Confidence 588999999999 44 58999999999999985 99999999999987642221
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEE
Q 006792 174 AYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVY 253 (631)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~y 253 (631)
|.+ ..|++.+
T Consensus 56 ---------------------------~~~-------------------------------------------~~~~i~v 65 (328)
T PRK10073 56 ---------------------------YAE-------------------------------------------NYPHVRL 65 (328)
T ss_pred ---------------------------HHh-------------------------------------------hCCCEEE
Confidence 100 0135666
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCC
Q 006792 254 VSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (631)
Q Consensus 254 v~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp 312 (631)
+.. + ++|.++|.|.|++. ++|+||+++|+|..+. |+.+.+++..+.++
T Consensus 66 i~~-~-----n~G~~~arN~gl~~----a~g~yi~flD~DD~~~-p~~l~~l~~~~~~~ 113 (328)
T PRK10073 66 LHQ-A-----NAGVSVARNTGLAV----ATGKYVAFPDADDVVY-PTMYETLMTMALED 113 (328)
T ss_pred EEC-C-----CCChHHHHHHHHHh----CCCCEEEEECCCCccC-hhHHHHHHHHHHhC
Confidence 653 2 36899999999999 8999999999999997 99999999877644
No 52
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.64 E-value=7.7e-15 Score=143.71 Aligned_cols=174 Identities=14% Similarity=0.039 Sum_probs=124.1
Q ss_pred EEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 006792 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (631)
Q Consensus 99 V~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (631)
|+||||| |+ ..+.++|.|++++.||. .+|+|+|||++|.|...+.+..
T Consensus 1 viI~~~n---~~-~~l~~~l~sl~~q~~~~--~eiiivD~~s~d~t~~~~~~~~-------------------------- 48 (202)
T cd04185 1 AVVVTYN---RL-DLLKECLDALLAQTRPP--DHIIVIDNASTDGTAEWLTSLG-------------------------- 48 (202)
T ss_pred CEEEeeC---CH-HHHHHHHHHHHhccCCC--ceEEEEECCCCcchHHHHHHhc--------------------------
Confidence 6899999 55 68999999999999995 6899999999997753221100
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 006792 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (631)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (631)
... .+.++.-++
T Consensus 49 -------------------------------------------------------------------~~~-~i~~~~~~~ 60 (202)
T cd04185 49 -------------------------------------------------------------------DLD-NIVYLRLPE 60 (202)
T ss_pred -------------------------------------------------------------------CCC-ceEEEECcc
Confidence 001 145555544
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccChHHH
Q 006792 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDG 338 (631)
Q Consensus 259 rpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~ 338 (631)
+.|.+.++|.|++.+- -+++|+++++|+|.+++ |+++.+++..+.+|+ ++++ +|..+.. + .
T Consensus 61 -----n~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~~-~~~l~~l~~~~~~~~----~~~~-~~~~~~~-~--~---- 121 (202)
T cd04185 61 -----NLGGAGGFYEGVRRAY-ELGYDWIWLMDDDAIPD-PDALEKLLAYADKDN----PQFL-APLVLDP-D--G---- 121 (202)
T ss_pred -----ccchhhHHHHHHHHHh-ccCCCEEEEeCCCCCcC-hHHHHHHHHHHhcCC----ceEe-cceeEcC-C--C----
Confidence 3568899999988632 25799999999999997 999999999888777 3444 2333221 0 0
Q ss_pred HHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcchhhHHhhcc
Q 006792 339 RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGV 418 (631)
Q Consensus 339 ~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 418 (631)
+++|.++||+++..++
T Consensus 122 ---------------------~~~~~~~~~~~~~~~g------------------------------------------- 137 (202)
T cd04185 122 ---------------------SFVGVLISRRVVEKIG------------------------------------------- 137 (202)
T ss_pred ---------------------ceEEEEEeHHHHHHhC-------------------------------------------
Confidence 4567899999997652
Q ss_pred cccccccccccccccccccC--CcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCC
Q 006792 419 LASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTT 474 (631)
Q Consensus 419 ~~~c~ye~~t~wg~e~G~~~--~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~ 474 (631)
|+.. ....||.+.++++..+|+++ |++. +...-..+.
T Consensus 138 ----------------~~~~~~~~~~eD~~~~~r~~~~G~~i-~~~~--~~~~h~~~~ 176 (202)
T cd04185 138 ----------------LPDKEFFIWGDDTEYTLRASKAGPGI-YVPD--AVVVHKTAI 176 (202)
T ss_pred ----------------CCChhhhccchHHHHHHHHHHcCCcE-Eecc--eEEEEcccc
Confidence 2321 13459999999999999999 9874 444443333
No 53
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.63 E-value=3.9e-15 Score=145.08 Aligned_cols=153 Identities=18% Similarity=0.194 Sum_probs=117.0
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccChHHHHHH-H
Q 006792 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFR-S 342 (631)
Q Consensus 264 ~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~-~ 342 (631)
-+.|.+||..+++. . +++|+|++.|+|..++ |++|++++..+.||+ +|.|..+....+. + .+..... .
T Consensus 15 ~N~Kv~nL~~~~~~-~--a~~d~~~~~DsDi~v~-p~~L~~lv~~l~~p~----vglVt~~~~~~~~--~-~~~~~l~~~ 83 (175)
T PF13506_consen 15 CNPKVNNLAQGLEA-G--AKYDYLVISDSDIRVP-PDYLRELVAPLADPG----VGLVTGLPRGVPA--R-GFWSRLEAA 83 (175)
T ss_pred CChHHHHHHHHHHh-h--CCCCEEEEECCCeeEC-HHHHHHHHHHHhCCC----CcEEEecccccCC--c-CHHHHHHHH
Confidence 45899999999987 3 7899999999999997 999999999999998 6678766554433 2 2333322 2
Q ss_pred HHHHHHHHhh-hcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcchhhHHhhccccc
Q 006792 343 AYCVQWQGMD-GLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLAS 421 (631)
Q Consensus 343 f~~~~~~g~d-~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 421 (631)
++.....-.. .-+..++.|..+++||++|.++
T Consensus 84 ~~~~~~~~~~a~~~~~~~~G~~m~~rr~~L~~~----------------------------------------------- 116 (175)
T PF13506_consen 84 FFNFLPGVLQALGGAPFAWGGSMAFRREALEEI----------------------------------------------- 116 (175)
T ss_pred HHhHHHHHHHHhcCCCceecceeeeEHHHHHHc-----------------------------------------------
Confidence 2222211111 1244578899999999999866
Q ss_pred ccccccccccccccccC--CcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecC----CCHHHHhhhhhhhhh
Q 006792 422 CSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTST----TNLNDLLIQGTRWGS 488 (631)
Q Consensus 422 c~ye~~t~wg~e~G~~~--~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP----~tl~~~~~Qr~RWa~ 488 (631)
||+.. +.++||+.++-+++++||+++..+ .++.....| .+++++++++.||++
T Consensus 117 ------------GG~~~l~~~ladD~~l~~~~~~~G~~v~~~~--~~v~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 117 ------------GGFEALADYLADDYALGRRLRARGYRVVLSP--YPVVQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred ------------ccHHHHhhhhhHHHHHHHHHHHCCCeEEEcc--hheeecccCccccccHHHHHHHHHhhcC
Confidence 45544 688999999999999999999987 467777777 489999999999985
No 54
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.63 E-value=2.3e-15 Score=150.70 Aligned_cols=149 Identities=17% Similarity=0.109 Sum_probs=90.2
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHH---Hhh-cCCCCCCceEEEccCc
Q 006792 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAM---CFH-LDPKISSSLAFVQFPQ 325 (631)
Q Consensus 250 ~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v---~~f-~Dp~~g~~vg~VQ~pq 325 (631)
++.++..+++ .|+++|+|.|++.+.. .++|+|+++|+|..++ |++|.+++ ..+ .++. ++.+ +|+
T Consensus 48 ~i~~i~~~~n-----~G~~~a~N~g~~~a~~-~~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~~~~~~----~~~~-~~~ 115 (237)
T cd02526 48 KIELIHLGEN-----LGIAKALNIGIKAALE-NGADYVLLFDQDSVPP-PDMVEKLLAYKILSDKNSN----IGAV-GPR 115 (237)
T ss_pred cEEEEECCCc-----eehHHhhhHHHHHHHh-CCCCEEEEECCCCCcC-HhHHHHHHHHHHhhccCCC----eEEE-eee
Confidence 3566666543 5699999999998210 1349999999999997 99999985 333 3555 4433 444
Q ss_pred ccccCCccChHHHHHHH-HHHHHHHHhhhc-CCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccC
Q 006792 326 KFHNINKYDIYDGRFRS-AYCVQWQGMDGL-KGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNA 403 (631)
Q Consensus 326 ~f~n~~~~d~~~~~~~~-f~~~~~~g~d~~-~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~ 403 (631)
................. .+.......... ......|+|+++||+++..+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~----------------------------- 166 (237)
T cd02526 116 IIDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEALEKV----------------------------- 166 (237)
T ss_pred EEcCCCCeeccceeccCccceecccccCCceEeeeeeccceEEcHHHHHHh-----------------------------
Confidence 33221111100000000 000000001111 12245688899999999865
Q ss_pred CCCCcchhhHHhhcccccccccccccccccccccCCcc--cchHHHHHHHHhcCCeEEEeCCCCCeeEee
Q 006792 404 NGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSV--SEDLFTGFILHCKGWTSTYLTPFRPQFLGT 471 (631)
Q Consensus 404 ~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sl--tED~~t~~rl~~~Gwrs~y~~~~~~~~~g~ 471 (631)
|||+.... .||+++++|+..+||++.|++. +...-.
T Consensus 167 ------------------------------ggfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~--~~v~h~ 204 (237)
T cd02526 167 ------------------------------GGFDEDLFIDYVDTEWCLRARSKGYKIYVVPD--AVLKHE 204 (237)
T ss_pred ------------------------------CCCCHHHcCccchHHHHHHHHHcCCcEEEEcC--eEEEec
Confidence 56665432 4899999999999999999983 444433
No 55
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.63 E-value=1.2e-14 Score=143.71 Aligned_cols=108 Identities=20% Similarity=0.163 Sum_probs=81.7
Q ss_pred EEEeccCCCCCChHHHHHHHHHHHcCCC--CCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccccc
Q 006792 99 VFICTADPEKEPAIGVMNTVLSAMALDY--PVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (631)
Q Consensus 99 V~Ipt~n~~~Ep~~~v~~Tv~s~l~~dY--P~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (631)
|+||+|| |+ ..+.++|.++.++.+ +...++|+|+||||+|.|.+.+.+.. ++
T Consensus 1 iiip~yN---~~-~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~~----------~~------------ 54 (211)
T cd04188 1 VVIPAYN---EE-KRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKLA----------RK------------ 54 (211)
T ss_pred CEEcccC---hH-HHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHHH----------Hh------------
Confidence 6899999 54 589999999998765 33459999999999998764332210 00
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCc-EEEEe
Q 006792 177 SEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL-LVYVS 255 (631)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~-l~yv~ 255 (631)
+ |. ++++.
T Consensus 55 ----------------------------------------------~-------------------------~~~i~~i~ 63 (211)
T cd04188 55 ----------------------------------------------N-------------------------PALIRVLT 63 (211)
T ss_pred ----------------------------------------------C-------------------------CCcEEEEE
Confidence 0 11 34555
Q ss_pred ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCC
Q 006792 256 REKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (631)
Q Consensus 256 Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~ 313 (631)
.++ +.||++|+|.|++. +.||+|+++|+|.... |+++.+++..+.++.
T Consensus 64 ~~~-----n~G~~~a~~~g~~~----a~gd~i~~ld~D~~~~-~~~l~~l~~~~~~~~ 111 (211)
T cd04188 64 LPK-----NRGKGGAVRAGMLA----ARGDYILFADADLATP-FEELEKLEEALKTSG 111 (211)
T ss_pred ccc-----CCCcHHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhccC
Confidence 443 35799999999999 8899999999999997 999999999865443
No 56
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.60 E-value=2.5e-15 Score=139.74 Aligned_cols=163 Identities=28% Similarity=0.356 Sum_probs=104.3
Q ss_pred EEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 006792 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (631)
Q Consensus 99 V~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (631)
|+||+|| |+ +.+.+||.|++++.|+. .+|+|+|||+++.|.+.+.+...
T Consensus 1 Viip~~n---~~-~~l~~~l~sl~~q~~~~--~~iivvdd~s~d~t~~~~~~~~~------------------------- 49 (180)
T cd06423 1 IIVPAYN---EE-AVIERTIESLLALDYPK--LEVIVVDDGSTDDTLEILEELAA------------------------- 49 (180)
T ss_pred CeecccC---hH-HHHHHHHHHHHhCCCCc--eEEEEEeCCCccchHHHHHHHhc-------------------------
Confidence 6899999 66 79999999999999964 89999999999977542221000
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 006792 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (631)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (631)
. . .+.+.++..++
T Consensus 50 ------------------------~-------------------~------------------------~~~~~~~~~~~ 62 (180)
T cd06423 50 ------------------------L-------------------Y------------------------IRRVLVVRDKE 62 (180)
T ss_pred ------------------------c-------------------c------------------------cceEEEEEecc
Confidence 0 0 01244444443
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHH-hhcCCCCCCceEEEccCcccccCCccChHH
Q 006792 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC-FHLDPKISSSLAFVQFPQKFHNINKYDIYD 337 (631)
Q Consensus 259 rpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~-~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~ 337 (631)
+.||+.|+|.|++. +++++|+++|+|..+. |++|.+++. ++.+++ ++.|.......+... ....
T Consensus 63 -----~~g~~~~~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~~~----~~~v~~~~~~~~~~~-~~~~ 127 (180)
T cd06423 63 -----NGGKAGALNAGLRH----AKGDIVVVLDADTILE-PDALKRLVVPFFADPK----VGAVQGRVRVRNGSE-NLLT 127 (180)
T ss_pred -----cCCchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHhccCCC----eeeEeeeEEEecCcC-ccee
Confidence 46799999999999 7999999999999997 999999955 455776 444444333222110 1111
Q ss_pred HHHHHHHH----HHHHHhhhcCC-cceeeeeeeeehhhhccc
Q 006792 338 GRFRSAYC----VQWQGMDGLKG-PVLSGTGYYIKRESLYAD 374 (631)
Q Consensus 338 ~~~~~f~~----~~~~g~d~~~~-~~~~Gsg~~~RR~AL~~~ 374 (631)
......+. ....+...... ..+.|++.++||+++..+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 169 (180)
T cd06423 128 RLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFRREALREV 169 (180)
T ss_pred ccchheecceeeeeeehhheecceeecCchHHHHHHHHHHHh
Confidence 11111010 01111111122 346788889999999865
No 57
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.59 E-value=8.1e-14 Score=145.53 Aligned_cols=109 Identities=16% Similarity=0.269 Sum_probs=85.8
Q ss_pred CCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCc
Q 006792 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (631)
Q Consensus 93 ~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p 172 (631)
..|.|+|+||||| ++ ..+.+||.|+++++||. +||+|+||||++ .+.+.+.+
T Consensus 3 ~~p~VSVIip~yN---~~-~~l~~~l~Svl~Qt~~~--~EiIVVDDgS~~--~~~~~~~~-------------------- 54 (279)
T PRK10018 3 DNPLISIYMPTWN---RQ-QLAIRAIKSVLRQDYSN--WEMIIVDDCSTS--WEQLQQYV-------------------- 54 (279)
T ss_pred CCCEEEEEEEeCC---CH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCC--HHHHHHHH--------------------
Confidence 4689999999999 54 47789999999999996 999999999984 22111100
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEE
Q 006792 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (631)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~ 252 (631)
+++ ..|++.
T Consensus 55 -----------------------------~~~------------------------------------------~~~ri~ 63 (279)
T PRK10018 55 -----------------------------TAL------------------------------------------NDPRIT 63 (279)
T ss_pred -----------------------------HHc------------------------------------------CCCCEE
Confidence 000 013577
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc
Q 006792 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (631)
Q Consensus 253 yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~ 310 (631)
++..++ +.|++.|+|.|+.. ++||||+++|+|.+.. |+.|.+.+.++.
T Consensus 64 ~i~~~~-----n~G~~~a~N~gi~~----a~g~~I~~lDaDD~~~-p~~l~~~~~~~~ 111 (279)
T PRK10018 64 YIHNDI-----NSGACAVRNQAIML----AQGEYITGIDDDDEWT-PNRLSVFLAHKQ 111 (279)
T ss_pred EEECCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCCC-ccHHHHHHHHHH
Confidence 776554 46899999999999 8999999999999998 999999888765
No 58
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.58 E-value=8.8e-13 Score=141.08 Aligned_cols=117 Identities=18% Similarity=0.155 Sum_probs=85.4
Q ss_pred CCCCceEEEEeccCCCCCChHHHHHHHHHHHcC------CCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhh
Q 006792 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMAL------DYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRY 165 (631)
Q Consensus 92 ~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~------dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~ 165 (631)
+..|.|+|+||+|| |. ..+.+++.++.++ ++|...++|+|+||||+|.|.+.+.+.+ +++
T Consensus 67 ~~~~~isVVIP~yN---e~-~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~----------~~~ 132 (333)
T PTZ00260 67 DSDVDLSIVIPAYN---EE-DRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFW----------RQN 132 (333)
T ss_pred CCCeEEEEEEeeCC---CH-HHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHH----------Hhc
Confidence 35689999999999 44 4788888887653 2455569999999999999875332211 000
Q ss_pred CCccCCcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccc
Q 006792 166 GIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADL 245 (631)
Q Consensus 166 ~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~ 245 (631)
. .+
T Consensus 133 ~--------------------------------------------------------~~--------------------- 135 (333)
T PTZ00260 133 I--------------------------------------------------------NP--------------------- 135 (333)
T ss_pred C--------------------------------------------------------CC---------------------
Confidence 0 00
Q ss_pred cCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcC
Q 006792 246 VEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (631)
Q Consensus 246 ~~~P~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~D 311 (631)
-+++.++..++ +.||++|+|.|++. +.||+|+++|+|...+ |+.+.+++..+.+
T Consensus 136 --~~~i~vi~~~~-----N~G~~~A~~~Gi~~----a~gd~I~~~DaD~~~~-~~~l~~l~~~l~~ 189 (333)
T PTZ00260 136 --NIDIRLLSLLR-----NKGKGGAVRIGMLA----SRGKYILMVDADGATD-IDDFDKLEDIMLK 189 (333)
T ss_pred --CCcEEEEEcCC-----CCChHHHHHHHHHH----ccCCEEEEEeCCCCCC-HHHHHHHHHHHHH
Confidence 01355565544 36799999999999 8899999999999997 9999888887753
No 59
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.56 E-value=2.8e-15 Score=139.45 Aligned_cols=166 Identities=17% Similarity=0.080 Sum_probs=108.1
Q ss_pred EEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCcccccc
Q 006792 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (631)
Q Consensus 98 dV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (631)
+|+||+|| |+ +.+.+|+.|++.+.++ ..+|+|+|||++|.|.+.+.+..+
T Consensus 1 Svvip~~n---~~-~~l~~~l~sl~~q~~~--~~eiivvdd~s~d~~~~~~~~~~~------------------------ 50 (169)
T PF00535_consen 1 SVVIPTYN---EA-EYLERTLESLLKQTDP--DFEIIVVDDGSTDETEEILEEYAE------------------------ 50 (169)
T ss_dssp EEEEEESS----T-TTHHHHHHHHHHHSGC--EEEEEEEECS-SSSHHHHHHHHHC------------------------
T ss_pred CEEEEeeC---CH-HHHHHHHHHHhhccCC--CEEEEEeccccccccccccccccc------------------------
Confidence 69999999 53 6899999999999666 499999999999977543322110
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEecc
Q 006792 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (631)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Re 257 (631)
..+++.|+.++
T Consensus 51 ---------------------------------------------------------------------~~~~i~~i~~~ 61 (169)
T PF00535_consen 51 ---------------------------------------------------------------------SDPNIRYIRNP 61 (169)
T ss_dssp ---------------------------------------------------------------------CSTTEEEEEHC
T ss_pred ---------------------------------------------------------------------ccccccccccc
Confidence 01358888887
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccC-hH
Q 006792 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYD-IY 336 (631)
Q Consensus 258 krpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d-~~ 336 (631)
++ .++++|+|.|++. ++++||+++|+|.++. |++|.+++..+.++.....++.+. ....+..... ..
T Consensus 62 ~n-----~g~~~~~n~~~~~----a~~~~i~~ld~D~~~~-~~~l~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 129 (169)
T PF00535_consen 62 EN-----LGFSAARNRGIKH----AKGEYILFLDDDDIIS-PDWLEELVEALEKNPPDVVIGSVI--YIDDDNRYPDRRL 129 (169)
T ss_dssp CC-----SHHHHHHHHHHHH------SSEEEEEETTEEE--TTHHHHHHHHHHHCTTEEEEEEEE--EEECTTETEECCC
T ss_pred cc-----ccccccccccccc----cceeEEEEeCCCceEc-HHHHHHHHHHHHhCCCcEEEEEEE--EecCCcccccccc
Confidence 63 4899999999999 8999999999999998 999999999998643221122221 1111111000 00
Q ss_pred H-HHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccc
Q 006792 337 D-GRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYAD 374 (631)
Q Consensus 337 ~-~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~ 374 (631)
. ......+..............++|+++++||++++++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~ 168 (169)
T PF00535_consen 130 RFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVFEEI 168 (169)
T ss_dssp TSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHHHHC
T ss_pred chhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHHHhh
Confidence 0 0000111222333445566788999999999999765
No 60
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.55 E-value=2.3e-13 Score=139.65 Aligned_cols=48 Identities=19% Similarity=0.119 Sum_probs=38.7
Q ss_pred CceEEEEeccCCCCCChHHHHHHHHHHHcCC-CCCCceEEEEEcCCCChhchH
Q 006792 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALD-YPVDKLHVYLSDDGGSPITLH 146 (631)
Q Consensus 95 P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~d-YP~~kl~V~V~DDg~~~~T~~ 146 (631)
|.|+|+||||| |+ +.+.+||.|+.++. .+...+||+|+||||+|.|.+
T Consensus 1 ~~vSVIi~~yN---~~-~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~ 49 (248)
T PRK10063 1 MLLSVITVAFR---NL-EGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTRE 49 (248)
T ss_pred CeEEEEEEeCC---CH-HHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHH
Confidence 67999999999 54 58999999998642 222359999999999998864
No 61
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.53 E-value=9.7e-14 Score=133.26 Aligned_cols=165 Identities=15% Similarity=0.055 Sum_probs=107.4
Q ss_pred EEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 006792 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (631)
Q Consensus 99 V~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (631)
|+||+|| |+ ..+.+|+.|+.++.|+....+|+|+|||++|.|.+.+.+..
T Consensus 1 iii~~~n---~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~-------------------------- 50 (185)
T cd04179 1 VVIPAYN---EE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELA-------------------------- 50 (185)
T ss_pred CeecccC---hH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHH--------------------------
Confidence 6899999 55 68999999999999865569999999999997754332210
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 006792 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (631)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (631)
+ ..|.++++..++
T Consensus 51 ------------------------~-------------------------------------------~~~~~~~~~~~~ 63 (185)
T cd04179 51 ------------------------A-------------------------------------------RVPRVRVIRLSR 63 (185)
T ss_pred ------------------------H-------------------------------------------hCCCeEEEEccC
Confidence 0 012345555554
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccChH-H
Q 006792 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIY-D 337 (631)
Q Consensus 259 rpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~-~ 337 (631)
+ .||++|+|.|++. +.||+|+++|+|..+. |++|.+++..+.++. .++|..+....+....... .
T Consensus 64 n-----~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~g~~~~~~~~~~~~~~~ 129 (185)
T cd04179 64 N-----FGKGAAVRAGFKA----ARGDIVVTMDADLQHP-PEDIPKLLEKLLEGG----ADVVIGSRFVRGGGAGMPLLR 129 (185)
T ss_pred C-----CCccHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhccC----CcEEEEEeecCCCcccchHHH
Confidence 3 5699999999999 8899999999999997 999999999865444 3455555544432110111 1
Q ss_pred HHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccc
Q 006792 338 GRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYAD 374 (631)
Q Consensus 338 ~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~ 374 (631)
......+................|...++||+++..+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~i 166 (185)
T cd04179 130 RLGSRLFNFLIRLLLGVRISDTQSGFRLFRREVLEAL 166 (185)
T ss_pred HHHHHHHHHHHHHHcCCCCcCCCCceeeeHHHHHHHH
Confidence 1111111111111122222234455568999999876
No 62
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.44 E-value=2.6e-12 Score=123.74 Aligned_cols=107 Identities=11% Similarity=0.060 Sum_probs=65.0
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCccccc
Q 006792 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHN 329 (631)
Q Consensus 250 ~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n 329 (631)
++.++..++ +.||++|+|.|++. +.+|+|+++|+|..+. |++|.+++..+ +++....+|.. ...+
T Consensus 56 ~i~~i~~~~-----n~G~~~a~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~-~~~~~~v~g~~----~~~~ 120 (181)
T cd04187 56 RVKVIRLSR-----NFGQQAALLAGLDH----ARGDAVITMDADLQDP-PELIPEMLAKW-EEGYDVVYGVR----KNRK 120 (181)
T ss_pred CEEEEEecC-----CCCcHHHHHHHHHh----cCCCEEEEEeCCCCCC-HHHHHHHHHHH-hCCCcEEEEEe----cCCc
Confidence 456665544 35799999999999 8899999999999997 99999999875 33322222211 1111
Q ss_pred CCccChHHHHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccc
Q 006792 330 INKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYAD 374 (631)
Q Consensus 330 ~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~ 374 (631)
...........+........+..-+...|+..++||+++..+
T Consensus 121 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~i 162 (181)
T cd04187 121 ---ESWLKRLTSKLFYRLINKLSGVDIPDNGGDFRLMDRKVVDAL 162 (181)
T ss_pred ---chHHHHHHHHHHHHHHHHHcCCCCCCCCCCEEEEcHHHHHHH
Confidence 111111111111111222222333345677779999999876
No 63
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.40 E-value=5.2e-12 Score=133.67 Aligned_cols=118 Identities=17% Similarity=0.112 Sum_probs=85.8
Q ss_pred CCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCC
Q 006792 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (631)
Q Consensus 92 ~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~ 171 (631)
..-|.|+|+||+|| |+ ..+.++|.++.++.++....+|+|+||||+|.|.+.+.+ ++.+
T Consensus 28 ~~~~~vSVVIPayN---ee-~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~--------------~~~~--- 86 (306)
T PRK13915 28 KAGRTVSVVLPALN---EE-ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAA--------------AGAR--- 86 (306)
T ss_pred cCCCCEEEEEecCC---cH-HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHH--------------hcch---
Confidence 45689999999999 54 589999999998765222479999999999988643222 1100
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcE
Q 006792 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (631)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l 251 (631)
++ +..
T Consensus 87 ---------------------------------------------------------v~------------------~~~ 91 (306)
T PRK13915 87 ---------------------------------------------------------VV------------------SRE 91 (306)
T ss_pred ---------------------------------------------------------hh------------------cch
Confidence 00 000
Q ss_pred EEEec-cCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCC-CCChHHHHHHHHhhc-CCCCC
Q 006792 252 VYVSR-EKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFHL-DPKIS 315 (631)
Q Consensus 252 ~yv~R-ekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~-~~~pd~L~~~v~~f~-Dp~~g 315 (631)
..+.+ + .++||++|+|.|+.. ++||+|+++|||.+ ++ |++|.+++..+. ||+.+
T Consensus 92 ~~~~~~~-----~n~Gkg~A~~~g~~~----a~gd~vv~lDaD~~~~~-p~~l~~l~~~l~~~~~~~ 148 (306)
T PRK13915 92 EILPELP-----PRPGKGEALWRSLAA----TTGDIVVFVDADLINFD-PMFVPGLLGPLLTDPGVH 148 (306)
T ss_pred hhhhccc-----cCCCHHHHHHHHHHh----cCCCEEEEEeCccccCC-HHHHHHHHHHHHhCCCce
Confidence 00001 1 246899999999998 89999999999997 65 999999999886 78743
No 64
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.40 E-value=3.3e-12 Score=132.46 Aligned_cols=145 Identities=14% Similarity=-0.040 Sum_probs=90.2
Q ss_pred CcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccc
Q 006792 249 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFH 328 (631)
Q Consensus 249 P~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~ 328 (631)
|++.++..++ +.|.|+|+|.|++.+- -.++|+|+++|.|.+++ |++|.+++..+..+. ..+++|. |..+.
T Consensus 45 ~~i~~i~~~~-----N~G~a~a~N~Gi~~a~-~~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~~--~~~~~~~-~~~~~ 114 (281)
T TIGR01556 45 QKIALIHLGD-----NQGIAGAQNQGLDASF-RRGVQGVLLLDQDSRPG-NAFLAAQWKLLSAEN--GQACALG-PRFFD 114 (281)
T ss_pred CCeEEEECCC-----CcchHHHHHHHHHHHH-HCCCCEEEEECCCCCCC-HHHHHHHHHHHHhcC--CceEEEC-CeEEc
Confidence 3577776554 3579999999999831 02689999999999997 999999998886431 1256654 43332
Q ss_pred cCCccChHHH--HHHHHHHHH-HHHhhh-cCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCC
Q 006792 329 NINKYDIYDG--RFRSAYCVQ-WQGMDG-LKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNAN 404 (631)
Q Consensus 329 n~~~~d~~~~--~~~~f~~~~-~~g~d~-~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~ 404 (631)
. +.+..+.. ......... ....+. .......++|+++||+++..+
T Consensus 115 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~li~~~~~~~i------------------------------ 163 (281)
T TIGR01556 115 R-GTSRRLPAIHLDGLLLRQISLDGLTTPQKTSFLISSGCLITREVYQRL------------------------------ 163 (281)
T ss_pred C-CCcccCCceeecccceeeecccccCCceeccEEEcCcceeeHHHHHHh------------------------------
Confidence 2 11111100 000000000 000011 112245688999999999876
Q ss_pred CCCcchhhHHhhcccccccccccccccccccccCC--cccchHHHHHHHHhcCCeEEEeCC
Q 006792 405 GENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQ--SVSEDLFTGFILHCKGWTSTYLTP 463 (631)
Q Consensus 405 ~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~--sltED~~t~~rl~~~Gwrs~y~~~ 463 (631)
|||+++ .=.||.+.++|+.++||++.+++.
T Consensus 164 -----------------------------G~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~ 195 (281)
T TIGR01556 164 -----------------------------GMMDEELFIDHVDTEWSLRAQNYGIPLYIDPD 195 (281)
T ss_pred -----------------------------CCccHhhcccchHHHHHHHHHHCCCEEEEeCC
Confidence 334332 114899999999999999999984
No 65
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.40 E-value=1.2e-10 Score=124.24 Aligned_cols=42 Identities=14% Similarity=0.089 Sum_probs=38.7
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc
Q 006792 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (631)
Q Consensus 264 ~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~ 310 (631)
+.||++|+|+|+++ ++||+++++|||...+ |+.+.+++..+.
T Consensus 75 n~G~~~A~~~G~~~----A~gd~vv~~DaD~q~~-p~~i~~l~~~~~ 116 (325)
T PRK10714 75 NYGQHSAIMAGFSH----VTGDLIITLDADLQNP-PEEIPRLVAKAD 116 (325)
T ss_pred CCCHHHHHHHHHHh----CCCCEEEEECCCCCCC-HHHHHHHHHHHH
Confidence 36899999999999 8999999999999997 999999998875
No 66
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.37 E-value=1.9e-11 Score=127.70 Aligned_cols=130 Identities=17% Similarity=0.186 Sum_probs=84.2
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHh---hc-CCCCCCceEEEccCcccccCCccChHHHHH
Q 006792 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF---HL-DPKISSSLAFVQFPQKFHNINKYDIYDGRF 340 (631)
Q Consensus 265 ~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~---f~-Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~ 340 (631)
-++|.|+|.|+.. +++|+|+++|+|+++. |+++.+++.+ +. ++. +++-.|..+.+...+..+....
T Consensus 74 f~~a~arN~g~~~----A~~d~l~flD~D~i~~-~~~i~~~~~~~~~l~~~~~-----~~~~~p~~yl~~~~~~~~~~~~ 143 (281)
T PF10111_consen 74 FSRAKARNIGAKY----ARGDYLIFLDADCIPS-PDFIEKLLNHVKKLDKNPN-----AFLVYPCLYLSEEGSEKFYSQF 143 (281)
T ss_pred cCHHHHHHHHHHH----cCCCEEEEEcCCeeeC-HHHHHHHHHHHHHHhcCCC-----ceEEEeeeeccchhhHHHhhcc
Confidence 4799999999999 8999999999999997 9999999993 22 332 3444565555433222221111
Q ss_pred HHHH--HHHHHH----hhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcchhhHH
Q 006792 341 RSAY--CVQWQG----MDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQE 414 (631)
Q Consensus 341 ~~f~--~~~~~g----~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (631)
.... ...... .+.++.....|++.+++|+.+..+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~~i---------------------------------------- 183 (281)
T PF10111_consen 144 KNLWDHEFLESFISGKNSLWEFIAFASSCFLINREDFLEI---------------------------------------- 183 (281)
T ss_pred hhcchHHHHHHHhhccccccccccccceEEEEEHHHHHHh----------------------------------------
Confidence 0000 111111 122222334566668999999876
Q ss_pred hhcccccccccccccccccccccCCc---ccchHHHHHHHHhcCCeEEEeCC
Q 006792 415 ETGVLASCSYEHQTKWGEEVGILYQS---VSEDLFTGFILHCKGWTSTYLTP 463 (631)
Q Consensus 415 ~a~~~~~c~ye~~t~wg~e~G~~~~s---ltED~~t~~rl~~~Gwrs~y~~~ 463 (631)
|||++.- -.||++++.||...|.+..+++.
T Consensus 184 -------------------GGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~ 216 (281)
T PF10111_consen 184 -------------------GGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPD 216 (281)
T ss_pred -------------------CCCCccccCCCcchHHHHHHHHHcCCcEecChH
Confidence 3444331 25999999999999999888763
No 67
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.33 E-value=3.1e-11 Score=109.41 Aligned_cols=113 Identities=28% Similarity=0.298 Sum_probs=82.6
Q ss_pred EEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccccccc
Q 006792 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (631)
Q Consensus 99 V~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (631)
|+||++| |+ ..+..|+.+++.++|+. .+++|+||++++.+.+.+.+..+
T Consensus 1 iii~~~~---~~-~~l~~~l~s~~~~~~~~--~~i~i~~~~~~~~~~~~~~~~~~------------------------- 49 (156)
T cd00761 1 VIIPAYN---EE-PYLERCLESLLAQTYPN--FEVIVVDDGSTDGTLEILEEYAK------------------------- 49 (156)
T ss_pred CEEeecC---cH-HHHHHHHHHHHhCCccc--eEEEEEeCCCCccHHHHHHHHHh-------------------------
Confidence 5899999 65 68999999999999964 89999999999866542222110
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEeccC
Q 006792 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREK 258 (631)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Rek 258 (631)
. .+...++..++
T Consensus 50 ------------------------~--------------------------------------------~~~~~~~~~~~ 61 (156)
T cd00761 50 ------------------------K--------------------------------------------DPRVIRVINEE 61 (156)
T ss_pred ------------------------c--------------------------------------------CCCeEEEEecC
Confidence 0 00123333333
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHH-hhcCCCCCCceEEEccC
Q 006792 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC-FHLDPKISSSLAFVQFP 324 (631)
Q Consensus 259 rpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~-~f~Dp~~g~~vg~VQ~p 324 (631)
+.+|++++|.++.. .++++++++|+|.++. |+.+...+. +..+++ .++|+++
T Consensus 62 -----~~g~~~~~~~~~~~----~~~d~v~~~d~D~~~~-~~~~~~~~~~~~~~~~----~~~v~~~ 114 (156)
T cd00761 62 -----NQGLAAARNAGLKA----ARGEYILFLDADDLLL-PDWLERLVAELLADPE----ADAVGGP 114 (156)
T ss_pred -----CCChHHHHHHHHHH----hcCCEEEEECCCCccC-ccHHHHHHHHHhcCCC----ceEEecc
Confidence 46899999999999 7899999999999997 999988744 444665 4456544
No 68
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.31 E-value=2.7e-11 Score=127.87 Aligned_cols=197 Identities=18% Similarity=0.190 Sum_probs=130.9
Q ss_pred CCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCcc
Q 006792 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQ 173 (631)
Q Consensus 94 ~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~ 173 (631)
.|.+.++|+|||+. +.+.+++.++.+++||. ..|+++|+|++|.|.+.+.+.
T Consensus 2 ~~~i~~iiv~yn~~----~~l~~~l~~l~~~~~~~--~~iv~vDn~s~d~~~~~~~~~---------------------- 53 (305)
T COG1216 2 MPKISIIIVTYNRG----EDLVECLASLAAQTYPD--DVIVVVDNGSTDGSLEALKAR---------------------- 53 (305)
T ss_pred CcceEEEEEecCCH----HHHHHHHHHHhcCCCCC--cEEEEccCCCCCCCHHHHHhh----------------------
Confidence 47899999999953 58999999999999997 445589999999876422210
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEE
Q 006792 174 AYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVY 253 (631)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~y 253 (631)
..|++.+
T Consensus 54 -------------------------------------------------------------------------~~~~v~~ 60 (305)
T COG1216 54 -------------------------------------------------------------------------FFPNVRL 60 (305)
T ss_pred -------------------------------------------------------------------------cCCcEEE
Confidence 0245777
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCC-EEEEeCCCCCCCChHHHHHHHHhhc-CCCCCCceEEEccCcccccCC
Q 006792 254 VSREKRPEHLHHFKAGALNVLLRVSGVISNSP-YILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNIN 331 (631)
Q Consensus 254 v~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~-~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~ 331 (631)
+.-.+ +.|=||+.|.|++.+. ++++ ++++++-|++++ |++|.+++..+. +|. .+.|+.....++..
T Consensus 61 i~~~~-----NlG~agg~n~g~~~a~--~~~~~~~l~LN~D~~~~-~~~l~~ll~~~~~~~~----~~~~~~~i~~~~~~ 128 (305)
T COG1216 61 IENGE-----NLGFAGGFNRGIKYAL--AKGDDYVLLLNPDTVVE-PDLLEELLKAAEEDPA----AGVVGPLIRNYDES 128 (305)
T ss_pred EEcCC-----CccchhhhhHHHHHHh--cCCCcEEEEEcCCeeeC-hhHHHHHHHHHHhCCC----CeEeeeeEecCCCC
Confidence 76554 4568999999999832 4444 899999999997 999999999887 555 34444333322211
Q ss_pred c-cChHHHHHHHH---------HHHH--HHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhh
Q 006792 332 K-YDIYDGRFRSA---------YCVQ--WQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYK 399 (631)
Q Consensus 332 ~-~d~~~~~~~~f---------~~~~--~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~ 399 (631)
. .+..+.....+ ++.. ....+...+ .++|+++++||+++..++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~li~~~~~~~vG------------------------ 183 (305)
T COG1216 129 LYIDRRGGESDGLTGGWRASPLLEIAPDLSSYLEVVA-SLSGACLLIRREAFEKVG------------------------ 183 (305)
T ss_pred cchheeccccccccccceecccccccccccchhhhhh-hcceeeeEEcHHHHHHhC------------------------
Confidence 0 01111000000 0000 000000000 368888999999998773
Q ss_pred cccCCCCCcchhhHHhhcccccccccccccccccccccCC--cccchHHHHHHHHhcCCeEEEeCC
Q 006792 400 QNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQ--SVSEDLFTGFILHCKGWTSTYLTP 463 (631)
Q Consensus 400 ~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~--sltED~~t~~rl~~~Gwrs~y~~~ 463 (631)
|++.+ .-.||++.++|+...||++.|++.
T Consensus 184 -----------------------------------~~de~~F~y~eD~D~~~R~~~~G~~i~~~p~ 214 (305)
T COG1216 184 -----------------------------------GFDERFFIYYEDVDLCLRARKAGYKIYYVPD 214 (305)
T ss_pred -----------------------------------CCCcccceeehHHHHHHHHHHcCCeEEEeec
Confidence 34332 446999999999999999999984
No 69
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=99.25 E-value=4.8e-11 Score=137.70 Aligned_cols=167 Identities=19% Similarity=0.253 Sum_probs=115.5
Q ss_pred ChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CCCCCCceEEEccCcccccCCccChHHHHHHHHH
Q 006792 266 FKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAY 344 (631)
Q Consensus 266 ~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~ 344 (631)
.|--.+|.+..... ..-+||+.+|+|+.+. |++|.+++.-|. ||++|+..| |. .|. .+..+.-.+...|
T Consensus 425 ~~r~~~y~~~~~L~--~~v~~il~vD~dT~~~-P~ai~~lv~~f~~dp~VggaCG--~I----~~~-~~~w~v~~Q~FEY 494 (862)
T KOG2571|consen 425 QHRWVMYTAFKALM--PSVDYILVVDADTRLD-PDALYHLVKVFDEDPQVGGACG--RI----LNK-GGSWVVAYQNFEY 494 (862)
T ss_pred HHHHHHHHHHHHhc--CcceEEEEecCCCccC-cHHHHHHHHHhccCcccceecc--cc----ccC-CCceEEeHHHHHH
Confidence 45555666666532 4557999999999997 999999999887 999887666 22 221 1111211122222
Q ss_pred H---HHHHHhhhcCCcceeeeee--eeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcchhhHHhhccc
Q 006792 345 C---VQWQGMDGLKGPVLSGTGY--YIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVL 419 (631)
Q Consensus 345 ~---~~~~g~d~~~~~~~~Gsg~--~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 419 (631)
. ..+++-+..-|-+.|-.|| +||-+||.+-.. ...+|
T Consensus 495 ~Ish~l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~~----~~~y~---------------------------------- 536 (862)
T KOG2571|consen 495 AISHNLQKATESVFGCVSCLPGCFSLYRASALMDQFV----EYFYG---------------------------------- 536 (862)
T ss_pred HHHHHHHHhhhhhceeEEecCchhHHHHHHHHhcchH----Hhhhc----------------------------------
Confidence 2 3566777777777777777 599999975310 01111
Q ss_pred ccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhhhhhhhh
Q 006792 420 ASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGL 490 (631)
Q Consensus 420 ~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G~ 490 (631)
++.=|..-|..+ ++.||-.+..++..+||+..|+. ++.+.+++|+++.+++.||+||..|.
T Consensus 537 -------~~~~~~~~~~~~-~~geDR~L~~~llskgy~l~Y~a--~s~a~t~~Pe~~~efl~QrrRW~~s~ 597 (862)
T KOG2571|consen 537 -------EKFSGPRHGIQY-SLGEDRWLCTLLLSKGYRLKYVA--ASDAETEAPESFLEFLNQRRRWLNSI 597 (862)
T ss_pred -------hhhcCccccccc-ccchhHHHHHHHHhccceeeeec--cccccccCcHhHHHHHHHhhhhcccc
Confidence 011011124443 48999999999999999999998 58999999999999999999999993
No 70
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.03 E-value=2e-09 Score=100.10 Aligned_cols=47 Identities=23% Similarity=0.306 Sum_probs=42.7
Q ss_pred CCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchH
Q 006792 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLH 146 (631)
Q Consensus 94 ~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~ 146 (631)
.|.++|+||||| |+ ..+.++|.|++++.|+. .+|+|+||||+|.|.+
T Consensus 2 ~~~~siiip~~n---~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~ 48 (291)
T COG0463 2 MPKVSVVIPTYN---EE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTE 48 (291)
T ss_pred CccEEEEEeccc---hh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHH
Confidence 588999999999 44 69999999999999997 7899999999998864
No 71
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=99.00 E-value=3.1e-09 Score=107.21 Aligned_cols=43 Identities=19% Similarity=0.248 Sum_probs=38.9
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCC
Q 006792 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (631)
Q Consensus 265 ~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp 312 (631)
.+.+.+.|.|+.. +.+++|+++|+|..+. |+.+.++...+.++
T Consensus 57 ~g~~~~~n~~~~~----a~~d~vl~lDaD~~~~-~~~~~~l~~~~~~~ 99 (229)
T cd02511 57 DGFGAQRNFALEL----ATNDWVLSLDADERLT-PELADEILALLATD 99 (229)
T ss_pred CChHHHHHHHHHh----CCCCEEEEEeCCcCcC-HHHHHHHHHHHhCC
Confidence 5799999999999 8899999999999997 99999998888743
No 72
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.70 E-value=7.5e-08 Score=101.44 Aligned_cols=226 Identities=17% Similarity=0.208 Sum_probs=149.5
Q ss_pred CCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCC
Q 006792 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (631)
Q Consensus 92 ~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~ 171 (631)
..+|+|+|+-|--+ -+ ..+.+-+++-...+|| |+|...+=+.+.|.-. |+. +
T Consensus 82 ~~LPgVSiikPl~G---~d-~nl~~Nlesffts~Y~--~~ElLfcv~s~eDpAi----~vv---~--------------- 133 (431)
T KOG2547|consen 82 PKLPGVSIIKPLKG---VD-PNLYHNLESFFTSQYH--KYELLFCVESSEDPAI----EVV---E--------------- 133 (431)
T ss_pred CCCCCceEEeeccc---CC-chhHHhHHHHHhhccC--ceEEEEEEccCCCcHH----HHH---H---------------
Confidence 47999999999988 33 3788999999999999 6999987776666322 111 1
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcE
Q 006792 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (631)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l 251 (631)
++-++| |++ + .-
T Consensus 134 ------------------------~Ll~ky----------------------p~V-d---------------------Ak 145 (431)
T KOG2547|consen 134 ------------------------RLLKKY----------------------PNV-D---------------------AK 145 (431)
T ss_pred ------------------------HHHhhC----------------------CCc-c---------------------eE
Confidence 111222 211 0 01
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEE-ccCcccccC
Q 006792 252 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFV-QFPQKFHNI 330 (631)
Q Consensus 252 ~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~V-Q~pq~f~n~ 330 (631)
.++.-++ -| -.-|-.|+=-|.+. +..|+|++.|.|-... ||.+.+++.-+..++. +|+| |+|-.++..
T Consensus 146 lf~gG~~-vg--~npKInN~mpgy~~----a~ydlvlisDsgI~m~-pdtildm~t~M~shek---malvtq~py~~dr~ 214 (431)
T KOG2547|consen 146 LFFGGEK-VG--LNPKINNMMPGYRA----AKYDLVLISDSGIFMK-PDTILDMATTMMSHEK---MALVTQTPYCKDRQ 214 (431)
T ss_pred EEEcccc-cc--cChhhhccCHHHHH----hcCCEEEEecCCeeec-CchHHHHHHhhhcccc---eeeecCCceeeccc
Confidence 2333333 12 23588888888888 8999999999999997 9999999988875552 7887 666554421
Q ss_pred CccChHHHHHHHHHHHHHHH----hhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCC
Q 006792 331 NKYDIYDGRFRSAYCVQWQG----MDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGE 406 (631)
Q Consensus 331 ~~~d~~~~~~~~f~~~~~~g----~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~ 406 (631)
++...-++ .+|...... -+-.+-.+.+|-.|+.|+++|++.+
T Consensus 215 --Gf~atle~-~~fgTsh~r~yl~~n~~~~~c~tgms~~mrK~~ld~~g------------------------------- 260 (431)
T KOG2547|consen 215 --GFDATLEQ-VYFGTSHPRIYLSGNVLGFNCSTGMSSMMRKEALDECG------------------------------- 260 (431)
T ss_pred --cchhhhhh-eeeccCCceEEEccccccccccccHHHHHHHHHHHHhc-------------------------------
Confidence 11111111 222221110 1111222345666788888887652
Q ss_pred CcchhhHHhhccccccccccccccccccccc--CCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhh
Q 006792 407 NFSNVLQEETGVLASCSYEHQTKWGEEVGIL--YQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGT 484 (631)
Q Consensus 407 ~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~--~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~ 484 (631)
|.. .+.+.||...+-.+..+||++.+.. .++-...+-.+...+..|-.
T Consensus 261 ----------------------------gi~~f~~yLaedyFaaksllSRG~ksaist--~palQnSas~~mssf~~Ri~ 310 (431)
T KOG2547|consen 261 ----------------------------GISAFGGYLAEDYFAAKSLLSRGWKSAIST--HPALQNSASVTMSSFLDRII 310 (431)
T ss_pred ----------------------------cHHHHHHHHHHHHHHHHHHHhhhhhhhhcc--cchhhhhhhhHHHHHHHHHH
Confidence 321 2368999999999999999999987 46666677788888899999
Q ss_pred hhhh
Q 006792 485 RWGS 488 (631)
Q Consensus 485 RWa~ 488 (631)
||..
T Consensus 311 rwvk 314 (431)
T KOG2547|consen 311 RWVK 314 (431)
T ss_pred Hhhh
Confidence 9964
No 73
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=98.59 E-value=2.1e-06 Score=83.19 Aligned_cols=54 Identities=15% Similarity=0.153 Sum_probs=43.7
Q ss_pred CcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCC
Q 006792 249 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (631)
Q Consensus 249 P~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp 312 (631)
+++....|.+. -|-.-|--+|+.+ +.|+|+++.|||-.-+ |.++-+.+..-.+-
T Consensus 63 d~i~l~pR~~k-----lGLgtAy~hgl~~----a~g~fiviMDaDlsHh-Pk~ipe~i~lq~~~ 116 (238)
T KOG2978|consen 63 DNILLKPRTKK-----LGLGTAYIHGLKH----ATGDFIVIMDADLSHH-PKFIPEFIRLQKEG 116 (238)
T ss_pred CcEEEEeccCc-----ccchHHHHhhhhh----ccCCeEEEEeCccCCC-chhHHHHHHHhhcc
Confidence 35777778763 5677889999999 9999999999999886 99998877755543
No 74
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=98.40 E-value=9.4e-07 Score=90.51 Aligned_cols=114 Identities=20% Similarity=0.145 Sum_probs=80.7
Q ss_pred ceEEEEeccCCCCCChHHHHHHHHHHHcCCCCC---CceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCc
Q 006792 96 AIDVFICTADPEKEPAIGVMNTVLSAMALDYPV---DKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (631)
Q Consensus 96 ~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~---~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p 172 (631)
..+|+||+|||++-=+.++..|+..+. ..|-. =+.+|+|+|||+.|.|.+.. +.||+|+|.+
T Consensus 68 ~lsVIVpaynE~~ri~~mldeav~~le-~ry~~~~~F~~eiiVvddgs~d~T~~~a----------~k~s~K~~~d---- 132 (323)
T KOG2977|consen 68 YLSVIVPAYNEEGRIGAMLDEAVDYLE-KRYLSDKSFTYEIIVVDDGSTDSTVEVA----------LKFSRKLGDD---- 132 (323)
T ss_pred eeEEEEecCCcccchHHHHHHHHHHHH-HHhccCCCCceeEEEeCCCCchhHHHHH----------HHHHHHcCcc----
Confidence 789999999976444455666666554 34544 37999999999999886422 2477766531
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEE
Q 006792 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (631)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~ 252 (631)
+++
T Consensus 133 -----------------------------------------------------------------------------~ir 135 (323)
T KOG2977|consen 133 -----------------------------------------------------------------------------NIR 135 (323)
T ss_pred -----------------------------------------------------------------------------eEE
Confidence 345
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCC--CCChHHHHHHHHhhc
Q 006792 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY--CNDPTSARQAMCFHL 310 (631)
Q Consensus 253 yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~--~~~pd~L~~~v~~f~ 310 (631)
++.-.+ +.||.||..-++-+ +.|+++++.|||.- ..|=+.|.+++.--.
T Consensus 136 V~~l~~-----nrgKGgAvR~g~l~----~rG~~ilfadAdGaTkf~d~ekLe~al~~~~ 186 (323)
T KOG2977|consen 136 VIKLKK-----NRGKGGAVRKGMLS----SRGQKILFADADGATKFADLEKLEKALNDKA 186 (323)
T ss_pred Eeehhc-----cCCCCcceehhhHh----ccCceEEEEcCCCCccCCCHHHHHHHHHhhc
Confidence 555444 46799999999988 89999999999963 334566777766443
No 75
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=98.02 E-value=6.3e-05 Score=80.58 Aligned_cols=44 Identities=20% Similarity=0.310 Sum_probs=36.9
Q ss_pred eEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhc
Q 006792 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPIT 144 (631)
Q Consensus 97 VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T 144 (631)
+.|+|.+|| -| +.+.+||.|++++.+-.+..+|+|++||+++.+
T Consensus 2 ~PVlv~ayN---Rp-~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~ 45 (334)
T cd02514 2 IPVLVIACN---RP-DYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEV 45 (334)
T ss_pred cCEEEEecC---CH-HHHHHHHHHHHhccccCCCceEEEEeCCCchHH
Confidence 468999999 55 799999999999874446789999999998754
No 76
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.07 E-value=0.0017 Score=69.63 Aligned_cols=49 Identities=22% Similarity=0.181 Sum_probs=42.5
Q ss_pred CCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChh
Q 006792 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPI 143 (631)
Q Consensus 92 ~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~ 143 (631)
.++|.-+|+|+-+| |...++.+||.|+++..=++--.||+++||+|.|.
T Consensus 121 ~dlp~TsviITfHN---EARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dp 169 (559)
T KOG3738|consen 121 VDLPPTSVIITFHN---EARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDP 169 (559)
T ss_pred cCCCCceEEEEecc---HHHHHHHHHHHHHHcCChHHhhheeEEecCCCCCh
Confidence 57999999999999 77789999999999987333367999999999984
No 77
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.85 E-value=0.0046 Score=66.21 Aligned_cols=49 Identities=24% Similarity=0.186 Sum_probs=40.7
Q ss_pred CCCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCCh
Q 006792 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSP 142 (631)
Q Consensus 91 ~~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~ 142 (631)
++++|+++|+|.-+| |--.++++||.|++.-.=|.---+|+++||-|+.
T Consensus 151 pe~Lpt~SVviVFHN---EGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdK 199 (603)
T KOG3737|consen 151 PENLPTSSVVIVFHN---EGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDK 199 (603)
T ss_pred cccCCcceEEEEEec---CccHHHHHHHHHHHhcCcHHhhheEEEeccCCcc
Confidence 478999999999999 8889999999999976633334578889997765
No 78
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.41 E-value=0.0032 Score=71.62 Aligned_cols=117 Identities=21% Similarity=0.155 Sum_probs=85.1
Q ss_pred CCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCC
Q 006792 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (631)
Q Consensus 92 ~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~ 171 (631)
+.+|+++|+|+-+| |...++.+||-|+....=|.--.+|+++||+++..-....
T Consensus 139 ~~Lp~~Svii~f~n---E~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~~l~~~----------------------- 192 (578)
T KOG3736|consen 139 DKLPTTSVIIIFHN---EAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRDHLKDK----------------------- 192 (578)
T ss_pred cccCCCceEEEEec---CCCcchhheEEeehccCChhHeEEEEEeecCcchhhhhhh-----------------------
Confidence 56999999999999 7778999999999987744446789999999986321000
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcE
Q 006792 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (631)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l 251 (631)
+ ++| ++. ++.+
T Consensus 193 -------------------L-------d~y--~k~-----------------------------------------~~~v 203 (578)
T KOG3736|consen 193 -------------------L-------EEY--VKR-----------------------------------------FSKV 203 (578)
T ss_pred -------------------h-------HHH--Hhh-----------------------------------------hcce
Confidence 0 011 110 1124
Q ss_pred EEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CCC
Q 006792 252 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPK 313 (631)
Q Consensus 252 ~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~ 313 (631)
.++..+|| .|+-.|.+.|-+. +.||+++++||=+-++ ..+|.-++.--. |.+
T Consensus 204 ~i~r~~~R-----~GLIrARl~GA~~----A~geVL~FLDsHcE~n-~gWLePLL~~I~~~r~ 256 (578)
T KOG3736|consen 204 RILRTKKR-----EGLIRARLLGASM----ATGEVLTFLDSHCEVN-VGWLEPLLARIAEDRK 256 (578)
T ss_pred eEEeecch-----hhhHHHHhhhhhh----hhchheeeeecceeEe-cCcchHHHHHhhhcCc
Confidence 55555655 4688999998888 8999999999999997 899888877555 544
No 79
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=95.33 E-value=0.059 Score=46.71 Aligned_cols=33 Identities=27% Similarity=0.317 Sum_probs=27.0
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchH
Q 006792 109 EPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLH 146 (631)
Q Consensus 109 Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~ 146 (631)
|. ..+...|..-+++.+- ++||.||||+|.|.+
T Consensus 3 e~-~~L~~wl~~~~~lG~d----~i~i~d~~s~D~t~~ 35 (97)
T PF13704_consen 3 EA-DYLPEWLAHHLALGVD----HIYIYDDGSTDGTRE 35 (97)
T ss_pred hH-HHHHHHHHHHHHcCCC----EEEEEECCCCccHHH
Confidence 54 5899999999888765 499999999998754
No 80
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=94.25 E-value=0.14 Score=51.77 Aligned_cols=47 Identities=19% Similarity=0.261 Sum_probs=38.3
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhh-cCCCCC
Q 006792 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKIS 315 (631)
Q Consensus 265 ~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f-~Dp~~g 315 (631)
..-|.++|.|++. ++++|++.+.-|..+.+++++.+++..| .||+.|
T Consensus 40 ~s~~~~yN~a~~~----a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~~G 87 (217)
T PF13712_consen 40 KSMAAAYNEAMEK----AKAKYLVFLHQDVFIINENWLEDILEIFEEDPNIG 87 (217)
T ss_dssp S-TTTHHHHHGGG------SSEEEEEETTEE-SSHHHHHHHHHHHHH-TTEE
T ss_pred cCHHHHHHHHHHh----CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCCCcc
Confidence 4578899999999 8999999999999998899999999999 799854
No 81
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=91.56 E-value=2.5 Score=43.95 Aligned_cols=81 Identities=20% Similarity=0.187 Sum_probs=42.8
Q ss_pred CCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCce-EEEccCcc
Q 006792 248 MPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSL-AFVQFPQK 326 (631)
Q Consensus 248 ~P~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~v-g~VQ~pq~ 326 (631)
+|++.|++-.. |. +=-.-+---|+|...|-.-.+..+|+++|+|++.. .|-..+.+..-.--++...+ ++.--|..
T Consensus 61 ~~~~~yl~~~s-~~-~F~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S-~dnF~k~l~~~~ikk~~tnI~a~~vlPV~ 137 (346)
T COG4092 61 MPRVLYLDFGS-PE-PFASETICANNGADYSHEKCESNLVLFLDVDCFGS-SDNFAKMLSIATIKKMRTNIDAPLVLPVY 137 (346)
T ss_pred ccceEEEecCC-Cc-cccchhhhhhccchhhhccccccEEEEEecccccc-HHHHHHHHHHHHHHHHHhccCcceeeeee
Confidence 46777876422 21 10111344455655532235689999999999997 55544544322211111113 44556777
Q ss_pred cccCC
Q 006792 327 FHNIN 331 (631)
Q Consensus 327 f~n~~ 331 (631)
|-|..
T Consensus 138 ~LNk~ 142 (346)
T COG4092 138 HLNKA 142 (346)
T ss_pred ecchh
Confidence 77653
No 82
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=91.06 E-value=0.46 Score=56.26 Aligned_cols=72 Identities=25% Similarity=0.343 Sum_probs=51.3
Q ss_pred cccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCC-CHHHHhhhhhhhhhhhhHHHHhhcCCcccCCCCCCHHHHHHh
Q 006792 440 SVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTT-NLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCY 516 (631)
Q Consensus 440 sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~-tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~y 516 (631)
.++||+..|+...+||-++.+++ =..+|-.-+ .+.+-..=-.+-+.|+-|..+||.-=-+ + .+|.+..-+.+
T Consensus 409 hLsEDIfaG~n~~lRGG~i~h~e---y~qcGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSRe~yrL-g-~~ld~~R~LSf 481 (817)
T PF02364_consen 409 HLSEDIFAGMNATLRGGRIKHCE---YIQCGKGRDVGFNSILNFETKIASGMGEQMLSREYYRL-G-TRLDFFRFLSF 481 (817)
T ss_pred cccHHHHHHHHHHhcCCceeehh---hhhcccccccCchhhhhhHhHhcCCccchhhhHHHHHh-h-ccCCHHHHHHH
Confidence 78999999999999999999986 344554443 4555555566788999999998741111 2 36777766653
No 83
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=90.40 E-value=3.9 Score=42.83 Aligned_cols=57 Identities=12% Similarity=0.086 Sum_probs=43.0
Q ss_pred CCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCC--hhchHHHHHHH
Q 006792 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGS--PITLHGMREAC 152 (631)
Q Consensus 92 ~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~--~~T~~~l~ea~ 152 (631)
.+-|+|=|+.|.-|- + ..+..=...+.+++||++++++-++-.-++ +.|...|.++.
T Consensus 22 ~~~e~VLILtplrna--~--~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~~ 80 (269)
T PF03452_consen 22 RNKESVLILTPLRNA--A--SFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAAL 80 (269)
T ss_pred ccCCeEEEEEecCCc--h--HHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHHH
Confidence 456899999999983 4 368999999999999999999955444444 66766555443
No 84
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=88.78 E-value=1.1 Score=45.41 Aligned_cols=38 Identities=16% Similarity=0.025 Sum_probs=28.4
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHH
Q 006792 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSA 302 (631)
Q Consensus 264 ~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L 302 (631)
.--||..||.|...+-...+.+++++-|.|.+|.| +.+
T Consensus 47 ~FNR~~llNvG~~~a~k~~~~dc~i~hDVDllP~~-~~~ 84 (219)
T cd00899 47 RFNRAKLLNVGFLEALKDGDWDCFIFHDVDLLPEN-DRN 84 (219)
T ss_pred cchhhhhhhHHHHHHhhcCCccEEEEecccccccC-ccc
Confidence 34599999998766432245789999999999984 544
No 85
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=88.72 E-value=1.9 Score=48.06 Aligned_cols=49 Identities=24% Similarity=0.388 Sum_probs=30.4
Q ss_pred CCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCC-CceEEEEEcCCCChhch
Q 006792 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPV-DKLHVYLSDDGGSPITL 145 (631)
Q Consensus 92 ~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~-~kl~V~V~DDg~~~~T~ 145 (631)
...|.+-|+|-+|| -| .-+.+||.++++.. |. +++.|+|+.||+.+.|.
T Consensus 90 ~~~~~~pVlV~AcN---Rp-~yl~r~L~sLl~~r-p~~~~fpIiVSQDg~~~~~~ 139 (434)
T PF03071_consen 90 NKEPVIPVLVFACN---RP-DYLRRTLDSLLKYR-PSAEKFPIIVSQDGDDEEVA 139 (434)
T ss_dssp -------EEEEESS----T-T-HHHHHHHHHHH--S-TTTS-EEEEE-TT-HHHH
T ss_pred cCCCcceEEEEecC---Cc-HHHHHHHHHHHHcC-CCCCCccEEEEecCCcHHHH
Confidence 45678889999999 55 57999999999977 64 68889999999987554
No 86
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=88.56 E-value=3.4 Score=44.66 Aligned_cols=43 Identities=16% Similarity=0.166 Sum_probs=32.9
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhh
Q 006792 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (631)
Q Consensus 264 ~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f 309 (631)
+.||+-+|=-|+-.+. +...+||-++|||.++ |.++.+-+.-|
T Consensus 142 R~GKgEGMiiG~lLAk-~~g~~YVGFiDADNyi--PGaV~EYvk~y 184 (393)
T PRK14503 142 RSGKGEGMIIGLLLAK-ALGARYVGFVDADNYI--PGAVNEYVKIY 184 (393)
T ss_pred ecCcchHHHHHHHHHH-HhCCCeEeEeecccCC--CchHHHHHHHH
Confidence 4689998888775532 2467999999999999 68888776644
No 87
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=88.55 E-value=3.7 Score=44.22 Aligned_cols=43 Identities=16% Similarity=0.162 Sum_probs=32.7
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhh
Q 006792 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (631)
Q Consensus 264 ~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f 309 (631)
+.||+-+|=-|+-.+. +...+||-++|||.++ |.++.+-+.-|
T Consensus 141 R~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyi--PGaV~EYvk~y 183 (381)
T TIGR02460 141 RSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYF--PGAVNEYVKIY 183 (381)
T ss_pred ecCcchHHHHHHHHHH-HhCCceEeEeecccCC--CchHHHHHHHH
Confidence 4689998888775532 2467999999999999 68887766644
No 88
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=85.60 E-value=6.7 Score=42.50 Aligned_cols=43 Identities=14% Similarity=0.137 Sum_probs=29.3
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhh
Q 006792 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (631)
Q Consensus 264 ~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f 309 (631)
+.||+-.|=-|+-.+. +...+||-++|||-+. |.++.+-+.-|
T Consensus 141 R~GKgEGMiiGillAk-~~g~~YVGFvDADNyi--PGaV~EYvk~y 183 (381)
T PF09488_consen 141 RNGKGEGMIIGILLAK-APGKRYVGFVDADNYI--PGAVNEYVKDY 183 (381)
T ss_dssp -SSHHHHHHHHHHHHH-HTT-SEEEE--TTBS---HHHHHHHHHHH
T ss_pred ecCchHHHHHHHHHHH-hcCCceEeEeeccCCC--cchHHHHHHHH
Confidence 4689999988876532 2567999999999998 78887766544
No 89
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=84.32 E-value=15 Score=35.64 Aligned_cols=49 Identities=16% Similarity=0.099 Sum_probs=34.3
Q ss_pred EEEEeccCCCCCCCCChHH----HHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhh
Q 006792 251 LVYVSREKRPEHLHHFKAG----ALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (631)
Q Consensus 251 l~yv~Rekrpg~~~~~KAg----ALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f 309 (631)
+.+.-+|+| .+|=. -.|+.-++ -+.++++.+||-+.|. +++|-++..-|
T Consensus 111 ~ifclKe~N-----~kKinSHrWfFnaf~~~----l~P~vcvllDvGT~P~-~~siy~Lwkaf 163 (163)
T PF01644_consen 111 IIFCLKEKN-----AKKINSHRWFFNAFCRQ----LQPNVCVLLDVGTKPG-KDSIYHLWKAF 163 (163)
T ss_pred EEEEecccc-----ccccchhhHHHHHHHhh----cCCcEEEEEecCCCcC-chHHHHHHhhC
Confidence 455667765 34533 33444444 7899999999999997 99998876543
No 90
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=79.76 E-value=12 Score=44.04 Aligned_cols=43 Identities=19% Similarity=0.159 Sum_probs=33.3
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhh
Q 006792 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (631)
Q Consensus 264 ~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f 309 (631)
+.||+-+|=-|+-.+. +...+||-++|||.++ |.++.+-+..|
T Consensus 146 r~gk~egm~~g~~la~-~~g~~yvgfidadny~--pg~v~ey~~~y 188 (694)
T PRK14502 146 RSGKAEGMILGIILTM-FSGRDYVGFIDTDNYI--PGAVWEYAKHF 188 (694)
T ss_pred ecCcchHHHHHHHHHH-hcCCceEeEeeccCCC--CchHHHHHHHH
Confidence 4689999888876532 3567999999999999 68888776644
No 91
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=67.09 E-value=47 Score=37.96 Aligned_cols=48 Identities=15% Similarity=0.131 Sum_probs=36.9
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHH
Q 006792 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQA 305 (631)
Q Consensus 250 ~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~ 305 (631)
++.++.... ....++.+|+.|++.. .+.++++++|.|+..+ +++|.+.
T Consensus 315 ~i~~i~~~~----~~fsr~~~Ld~g~~~~---~~d~L~f~~Dvd~~f~-~~fL~rc 362 (499)
T PF05679_consen 315 RIKWISVKT----GEFSRGAALDVGAKKF---PPDSLLFFCDVDMVFT-SDFLNRC 362 (499)
T ss_pred ceEEEEecC----CCccHHHHHHhhcccC---CCCcEEEEEeCCcccC-HHHHHHH
Confidence 356666541 1356999999999863 5678999999999997 9999865
No 92
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=63.91 E-value=6.9 Score=33.13 Aligned_cols=22 Identities=18% Similarity=-0.117 Sum_probs=15.5
Q ss_pred cchHHHHHHHHhcCCeEEEeCC
Q 006792 442 SEDLFTGFILHCKGWTSTYLTP 463 (631)
Q Consensus 442 tED~~t~~rl~~~Gwrs~y~~~ 463 (631)
-||.++..|+...|.++...+.
T Consensus 46 ~ED~Dl~~Rl~~~g~~~~~~~~ 67 (78)
T PF02709_consen 46 GEDDDLYNRLWKAGLKIVRVPG 67 (78)
T ss_dssp SHHHHHHHHHHHTT---B-SST
T ss_pred ccHHHHHHHHHHcCCeEEecCC
Confidence 3999999999999998776553
No 93
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=58.96 E-value=95 Score=30.61 Aligned_cols=44 Identities=16% Similarity=0.077 Sum_probs=33.8
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCChHHHHHHHHhhcC
Q 006792 265 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 311 (631)
Q Consensus 265 ~~KAgALN~~l~~s~~~t~g~~Il~~DaD~-~~~~pd~L~~~v~~f~D 311 (631)
.+.++++-.|+.... .+.+.+++++||+ ... ++.+.+++..+.+
T Consensus 73 ~g~~~ai~~a~~~~~--~~~~~vli~~~D~p~~~-~~~i~~l~~~~~~ 117 (229)
T cd02540 73 LGTGHAVKQALPALK--DFEGDVLVLYGDVPLIT-PETLQRLLEAHRE 117 (229)
T ss_pred CCCHHHHHHHHHhhc--cCCCeEEEEeCCccccC-HHHHHHHHHHHHh
Confidence 468999999998732 1268899999999 454 7888888887754
No 94
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=54.28 E-value=17 Score=39.05 Aligned_cols=36 Identities=22% Similarity=0.260 Sum_probs=28.2
Q ss_pred HHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc
Q 006792 270 ALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (631)
Q Consensus 270 ALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~ 310 (631)
-.|.|+.. +..++|+++|+|++|. ++.-.....+..
T Consensus 118 LRNvAr~~----a~T~~v~~~DvD~~ps-~~l~~~l~~~~~ 153 (317)
T PF13896_consen 118 LRNVARSG----ARTDYVFLLDVDFLPS-PGLYEKLLRFAR 153 (317)
T ss_pred HHHHHHHh----cCcceEEEecceeeeC-cchHHHHHHHhh
Confidence 34778888 8899999999999997 777666555443
No 95
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=54.11 E-value=29 Score=35.95 Aligned_cols=30 Identities=27% Similarity=0.343 Sum_probs=23.5
Q ss_pred CCCCEEEEeCCCCCCCChHHHHHHHHhhcCCC
Q 006792 282 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (631)
Q Consensus 282 t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~ 313 (631)
.+.+.++.+|-|++++ .+-|++.+.-| ||.
T Consensus 85 ~~~~Wf~~~DDDtyv~-~~~L~~~L~~~-~~~ 114 (252)
T PF02434_consen 85 SDKDWFCFADDDTYVN-VENLRRLLSKY-DPS 114 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS--TT
T ss_pred CCceEEEEEeCCceec-HHHHHHHHhhC-CCc
Confidence 4679999999999997 99999988866 454
No 96
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=48.87 E-value=1.8e+02 Score=29.91 Aligned_cols=55 Identities=13% Similarity=0.016 Sum_probs=35.2
Q ss_pred CCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEe--CCCCCCCChHHHHHHHHhhc
Q 006792 248 MPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGL--DCDMYCNDPTSARQAMCFHL 310 (631)
Q Consensus 248 ~P~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~--DaD~~~~~pd~L~~~v~~f~ 310 (631)
+|+++.+.++. +....++..+++... ...+++++.+ |.|.-+. .|+++++-.+..
T Consensus 84 ~p~~~i~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~~~RLDdDDAl~-~dFV~rlr~~a~ 140 (234)
T PF11316_consen 84 YPQFRIVFRPP------GPHRDAMRRAINAAR-RDGADPVLQFRLDDDDALH-RDFVARLRRAAA 140 (234)
T ss_pred CCCcEEEecCC------chHHHHHHHHHhhhc-cCCCCEEEEEEECCcchhh-HHHHHHHHHHHH
Confidence 34455555532 335677777774421 1345655555 9999997 999998887774
No 97
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=42.07 E-value=3.4e+02 Score=27.28 Aligned_cols=58 Identities=5% Similarity=-0.071 Sum_probs=39.2
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEc
Q 006792 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQ 322 (631)
Q Consensus 265 ~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ 322 (631)
-+...++.+++.......+.+.|++++||+=.-+++.+.+++..|.+.+....+.++.
T Consensus 76 ~~~~~si~~~l~~l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~~~~ds~~sv~~ 133 (222)
T TIGR03584 76 TGTAPVVKHAIEELKLQKQYDHACCIYATAPFLQAKILKEAFELLKQPNAHFVFSVTS 133 (222)
T ss_pred CCchHHHHHHHHHHhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeec
Confidence 3566677777765211024689999999998878999999999887533223344444
No 98
>PLN03153 hypothetical protein; Provisional
Probab=40.74 E-value=1.3e+02 Score=34.53 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=25.5
Q ss_pred CCCCEEEEeCCCCCCCChHHHHHHHHhhcCCC
Q 006792 282 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (631)
Q Consensus 282 t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~ 313 (631)
.+.+.++++|.|++.. ++-|.+.+.-+ ||+
T Consensus 209 pd~kWfVf~DDDTyf~-~~NLv~~Ls~Y-Dpt 238 (537)
T PLN03153 209 PDVRWFVLGDDDTIFN-ADNLVAVLSKY-DPS 238 (537)
T ss_pred CCCCEEEEecCCcccc-HHHHHHHHhhc-CCC
Confidence 6789999999999997 88888887766 665
No 99
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=38.70 E-value=39 Score=33.06 Aligned_cols=37 Identities=22% Similarity=0.318 Sum_probs=28.2
Q ss_pred HHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhh
Q 006792 269 GALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (631)
Q Consensus 269 gALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f 309 (631)
.+++.+.... .+.+||+.+|-|++++ ++.|.+.+.-.
T Consensus 69 ~~~~w~~~~c---~~~~~v~k~DDD~~vn-~~~l~~~L~~~ 105 (195)
T PF01762_consen 69 AGLKWASKHC---PNAKYVLKVDDDVFVN-PDRLVSFLKSL 105 (195)
T ss_pred HHHHHHHhhC---CchhheeecCcEEEEe-hHHhhhhhhhc
Confidence 4566666662 4589999999999997 88887766644
No 100
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=36.37 E-value=30 Score=43.55 Aligned_cols=71 Identities=23% Similarity=0.318 Sum_probs=45.4
Q ss_pred cccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCC-CHHHHhhhhhhhhhhhhHHHHhhcCCcccCCCCCCHHHHHH
Q 006792 440 SVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTT-NLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMC 515 (631)
Q Consensus 440 sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~-tl~~~~~Qr~RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~ 515 (631)
.++||+..|+.-..||-++.+|+ -...|-.-+ .+..-..=-..=+.|+=|..+||.- ...| .++.+..-|.
T Consensus 1173 nlsEDIfAG~n~tlRgG~itH~E---YiQvGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd~-YrLG-~~ldffRmLS 1244 (1679)
T KOG0916|consen 1173 NLSEDIFAGFNATLRGGNITHHE---YIQVGKGRDVGLNQISNFEAKIANGNGEQTLSRDY-YRLG-TQLDFFRMLS 1244 (1679)
T ss_pred ccchHhhhhhhHHhhCCCcccce---eeecccccccCcchhhhhhhhhcCCCcchhhhHHH-HHhc-ccccHHHHHH
Confidence 78999999999999999998886 233333322 2333333344667888888888741 1123 2566665554
No 101
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=36.10 E-value=96 Score=33.95 Aligned_cols=36 Identities=33% Similarity=0.443 Sum_probs=26.1
Q ss_pred HHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHH
Q 006792 268 AGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQA 305 (631)
Q Consensus 268 AgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~ 305 (631)
-.+|+..++..+ +..+|+|++-|.|.+|+ |++|..+
T Consensus 164 R~~l~~l~~~~~-~~~dDliivSDvDEIP~-p~~l~~L 199 (356)
T PF04724_consen 164 RNALNGLLRLAG-IQDDDLIIVSDVDEIPS-PETLKFL 199 (356)
T ss_pred HHHHHHHhhhcC-CCCCCEEEEcCcccccC-HHHHHHH
Confidence 345554444433 47899999999999997 9888644
No 102
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=34.69 E-value=1e+02 Score=29.39 Aligned_cols=42 Identities=14% Similarity=0.053 Sum_probs=32.0
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCChHHHHHHHHhhc
Q 006792 265 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHL 310 (631)
Q Consensus 265 ~~KAgALN~~l~~s~~~t~g~~Il~~DaD~-~~~~pd~L~~~v~~f~ 310 (631)
.+-++++..|++. ..+.+.+++++||+ .+. ++.+++++..+.
T Consensus 74 ~g~~~si~~~l~~---~~~~~~vlv~~~D~P~i~-~~~i~~l~~~~~ 116 (188)
T TIGR03310 74 EGQSSSIKLGLEL---PVQSDGYLFLLGDQPFVT-PDIIQLLLEAFA 116 (188)
T ss_pred cCHHHHHHHHhcC---CCCCCEEEEEeCCcCCCC-HHHHHHHHHHHH
Confidence 3567778888872 15678999999999 454 899999888665
No 103
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=34.23 E-value=1.2e+02 Score=28.56 Aligned_cols=43 Identities=14% Similarity=0.033 Sum_probs=34.2
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCChHHHHHHHHhhc
Q 006792 265 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHL 310 (631)
Q Consensus 265 ~~KAgALN~~l~~s~~~t~g~~Il~~DaD~-~~~~pd~L~~~v~~f~ 310 (631)
.+-+.++..|++... .+.+.+++++||+ .++ ++.+++++..+.
T Consensus 74 ~G~~~~i~~al~~~~--~~~~~vlv~~~D~P~i~-~~~i~~l~~~~~ 117 (186)
T cd04182 74 EGMSSSLAAGLEALP--ADADAVLILLADQPLVT-AETLRALIDAFR 117 (186)
T ss_pred hCHHHHHHHHHHhcc--ccCCEEEEEeCCCCCCC-HHHHHHHHHHHH
Confidence 578888999998832 1378999999999 554 899998888765
No 104
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=33.61 E-value=1.1e+02 Score=33.80 Aligned_cols=40 Identities=13% Similarity=0.006 Sum_probs=30.5
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc
Q 006792 267 KAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (631)
Q Consensus 267 KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~ 310 (631)
....+-+|++. .+.++|++.|||+=.-+++.+.+++..+.
T Consensus 83 r~~SV~~gL~~----l~~d~VLVhdadrPfv~~e~I~~li~~~~ 122 (378)
T PRK09382 83 RQESVRNALEA----LDSEYVLIHDAARPFVPKELIDRLIEALD 122 (378)
T ss_pred HHHHHHHHHHh----cCCCeEEEeeccccCCCHHHHHHHHHHhh
Confidence 56778888887 44599999999974445899988877654
No 105
>COG4097 Predicted ferric reductase [Inorganic ion transport and metabolism]
Probab=32.47 E-value=2e+02 Score=31.80 Aligned_cols=65 Identities=14% Similarity=0.201 Sum_probs=41.6
Q ss_pred CCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCc
Q 006792 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (631)
Q Consensus 93 ~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p 172 (631)
.-|+|+.+-|+.| +++.+-++-++++.. .-|. +++.++|.+.++---....| |++-++|.|
T Consensus 342 s~~~V~L~Y~~~n---~e~~~y~~eLr~~~q-kl~~--~~lHiiDSs~~g~l~~e~le-------------r~~~~~~~~ 402 (438)
T COG4097 342 SDPPVHLFYCSRN---WEEALYAEELRALAQ-KLPN--VVLHIIDSSKDGYLDQEDLE-------------RYPDRPRTR 402 (438)
T ss_pred cCCceEEEEEecC---CchhHHHHHHHHHHh-cCCC--eEEEEecCCCCCccCHHHhh-------------ccccccCcc
Confidence 5689999999999 444677778887664 4465 66777665555432211222 445566777
Q ss_pred cccc
Q 006792 173 QAYF 176 (631)
Q Consensus 173 ~~yf 176 (631)
.-||
T Consensus 403 sv~f 406 (438)
T COG4097 403 SVFF 406 (438)
T ss_pred eEEE
Confidence 7777
No 106
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed
Probab=31.50 E-value=98 Score=29.94 Aligned_cols=43 Identities=12% Similarity=0.067 Sum_probs=33.6
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcC
Q 006792 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 311 (631)
Q Consensus 265 ~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~D 311 (631)
.+-.+++..|++. .+.+.+++++||+-.-+++.+.+++..+.+
T Consensus 74 ~g~~~~i~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~ 116 (193)
T PRK00317 74 PGPLAGILAGLKQ----ARTEWVLVVPCDTPFIPPDLVARLAQAAGK 116 (193)
T ss_pred CCCHHHHHHHHHh----cCCCeEEEEcCCcCCCCHHHHHHHHHhhhc
Confidence 3456788888887 678999999999944349999998887653
No 107
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=28.79 E-value=1.2e+02 Score=29.04 Aligned_cols=42 Identities=12% Similarity=0.129 Sum_probs=34.3
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCChHHHHHHHHhhcC
Q 006792 265 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 311 (631)
Q Consensus 265 ~~KAgALN~~l~~s~~~t~g~~Il~~DaD~-~~~~pd~L~~~v~~f~D 311 (631)
.+-.+++-.|+.. .+.+.+++++||+ .+. ++.+.+++..+.+
T Consensus 73 ~g~~~si~~al~~----~~~~~vlv~~~D~P~i~-~~~i~~l~~~~~~ 115 (186)
T TIGR02665 73 PGPLAGILAGLRW----AGTDWVLTVPCDTPFLP-EDLVARLAAALEA 115 (186)
T ss_pred CCCHHHHHHHHHh----cCCCeEEEEecCCCcCC-HHHHHHHHHHhhc
Confidence 5678888889987 4678999999999 565 9999998887753
No 108
>KOG3916 consensus UDP-Gal:glucosylceramide beta-1,4-galactosyltransferase [Carbohydrate transport and metabolism]
Probab=28.46 E-value=2.7e+02 Score=30.35 Aligned_cols=34 Identities=18% Similarity=-0.013 Sum_probs=27.2
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCC
Q 006792 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCND 298 (631)
Q Consensus 265 ~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~ 298 (631)
.-+|.=||.|...+.....-|-+++-|.|++|+|
T Consensus 197 FNRakL~NVGf~eAlkd~~wdCfIFHDVDllPen 230 (372)
T KOG3916|consen 197 FNRAKLLNVGFLEALKDYGWDCFIFHDVDLLPEN 230 (372)
T ss_pred ccHHHhhhhHHHHHHHhcCCCEEEEecccccccC
Confidence 4589999999887543345689999999999985
No 109
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=28.13 E-value=1.3e+02 Score=32.55 Aligned_cols=35 Identities=14% Similarity=0.202 Sum_probs=26.5
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHH
Q 006792 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSAR 303 (631)
Q Consensus 265 ~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~ 303 (631)
+.+..=-|..+.. +...++++-+|||++-. ++-|.
T Consensus 160 n~l~~YYNy~ls~---ipk~~w~iKID~DhIy~-~~KL~ 194 (347)
T PF06306_consen 160 NSLYNYYNYVLSF---IPKNEWAIKIDADHIYD-TKKLY 194 (347)
T ss_pred hhhhhhhhhhhcc---cccceEEEEeccceeec-HHHHh
Confidence 4466667777765 35789999999999996 77763
No 110
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=25.96 E-value=2.2e+02 Score=27.00 Aligned_cols=42 Identities=19% Similarity=0.247 Sum_probs=34.4
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhh
Q 006792 264 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 309 (631)
Q Consensus 264 ~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f 309 (631)
..+-.+++..|++. .+.+.+++++||+-.-+++.+++++..+
T Consensus 68 ~~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 68 GKGPLAGILAALRA----APADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 35678899999988 5689999999999533499999888866
No 111
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=25.37 E-value=3.2e+02 Score=26.78 Aligned_cols=42 Identities=14% Similarity=0.007 Sum_probs=33.7
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc
Q 006792 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 310 (631)
Q Consensus 265 ~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~ 310 (631)
.|-.+++-.|+.. .+.+.+++++||+-.-+++.+.+++..+.
T Consensus 78 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 119 (200)
T PRK02726 78 QGPLVAFAQGLPQ----IKTEWVLLLACDLPRLTVDVLQEWLQQLE 119 (200)
T ss_pred CChHHHHHHHHHh----CCCCcEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 4566788888887 56789999999997666899988887664
No 112
>KOG4179 consensus Lysyl hydrolase/glycosyltransferase family 25 [Posttranslational modification, protein turnover, chaperones]
Probab=22.37 E-value=3.8e+02 Score=30.04 Aligned_cols=36 Identities=28% Similarity=0.091 Sum_probs=29.0
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHH
Q 006792 267 KAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 307 (631)
Q Consensus 267 KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~ 307 (631)
|-.|+|.|=.- -++||++.|+|.++.++|.|.-+|.
T Consensus 98 Keea~~~~r~~-----~adyilf~d~d~lLts~dTl~llm~ 133 (568)
T KOG4179|consen 98 KEEALNWARSG-----WADYILFKDEDNLLTSGDTLPLLMN 133 (568)
T ss_pred HHHHHHHHHhh-----hcceeEEeehhheeeCCchHhHHHh
Confidence 67788877543 4699999999999998999876665
Done!