Query 006792
Match_columns 631
No_of_seqs 354 out of 1941
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 09:05:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006792.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006792hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 5.9E-48 2E-52 452.6 44.6 374 19-554 65-447 (802)
2 3bcv_A Putative glycosyltransf 99.8 2.6E-20 8.9E-25 184.7 13.6 110 93-312 3-112 (240)
3 1xhb_A Polypeptide N-acetylgal 99.8 9.2E-20 3.2E-24 200.5 18.8 236 92-501 26-300 (472)
4 1qg8_A Protein (spore coat pol 99.8 7.7E-20 2.6E-24 183.2 12.5 220 95-489 1-235 (255)
5 2z86_A Chondroitin synthase; G 99.8 2.7E-19 9.2E-24 203.4 18.2 211 93-478 91-337 (625)
6 2d7i_A Polypeptide N-acetylgal 99.8 3E-18 1E-22 193.7 18.5 237 92-501 109-378 (570)
7 2ffu_A Ppgalnact-2, polypeptid 99.8 1.9E-18 6.6E-23 191.8 15.8 113 91-312 62-174 (501)
8 2z86_A Chondroitin synthase; G 99.7 4.3E-18 1.5E-22 193.5 14.3 219 93-494 373-598 (625)
9 3ckj_A Putative uncharacterize 99.7 5.4E-16 1.9E-20 163.2 14.4 117 92-315 45-164 (329)
10 4fix_A UDP-galactofuranosyl tr 99.6 2E-15 7E-20 173.2 13.7 120 93-315 178-300 (657)
11 3l7i_A Teichoic acid biosynthe 99.6 5.3E-17 1.8E-21 188.4 0.0 196 94-463 1-199 (729)
12 3f1y_A Mannosyl-3-phosphoglyce 99.5 2.5E-13 8.7E-18 146.5 19.3 121 93-319 92-216 (387)
13 2fy7_A Beta-1,4-galactosyltran 99.5 3.7E-14 1.3E-18 147.1 11.0 134 267-494 113-263 (287)
14 2nxv_A ATP synthase subunits r 99.2 1.8E-10 6.1E-15 116.3 14.4 43 267-314 62-109 (249)
15 2bo4_A Mannosylglycerate synth 98.9 2.2E-08 7.6E-13 108.2 19.0 42 264-310 73-119 (397)
16 2wvl_A Mannosyl-3-phosphoglyce 98.3 2E-06 6.9E-11 90.5 10.6 44 93-145 51-94 (391)
17 2zu9_A Mannosyl-3-phosphoglyce 98.2 3.9E-06 1.3E-10 90.0 11.1 38 265-308 143-183 (394)
18 1fo8_A Alpha-1,3-mannosyl-glyc 98.0 1.8E-05 6.3E-10 83.7 10.2 47 94-145 1-47 (343)
19 3lw6_A FI08434P, beta-4-galact 90.0 1.1 3.8E-05 45.7 9.4 32 265-298 97-128 (287)
20 2c0n_A A197; thermophil protei 74.9 6.3 0.00021 38.1 7.1 24 282-306 52-78 (203)
21 3tqd_A 3-deoxy-manno-octuloson 49.6 76 0.0026 31.2 9.9 46 266-313 82-128 (256)
22 2j0a_A Beta-1,3-N-acetylglucos 44.4 24 0.00081 35.6 5.3 30 282-313 92-121 (280)
23 3oam_A 3-deoxy-manno-octuloson 43.4 1.2E+02 0.004 29.4 10.1 44 265-311 74-118 (252)
24 3d5n_A Q97W15_sulso; NESG, SSR 39.6 60 0.002 30.2 7.0 41 265-309 71-112 (197)
25 2xwl_A 2-C-methyl-D-erythritol 27.5 1.1E+02 0.0038 28.4 6.7 40 266-309 78-118 (223)
26 1e5k_A Molybdopterin-guanine d 23.5 90 0.0031 29.1 5.2 39 265-308 77-116 (201)
27 2y6p_A 3-deoxy-manno-octuloson 22.8 95 0.0033 29.2 5.3 41 265-311 72-113 (234)
28 3k8d_A 3-deoxy-manno-octuloson 20.5 1.9E+02 0.0065 28.5 7.1 46 266-313 91-136 (264)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=5.9e-48 Score=452.59 Aligned_cols=374 Identities=22% Similarity=0.349 Sum_probs=303.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCC-CchhHHHHHHHHHHHHHHHHHHHHHHHhhheeccccCCCCCCCCCCCCCce
Q 006792 19 INRLHALLHCIAIGFLIYYRASYLLQET-RAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAI 97 (631)
Q Consensus 19 ~~r~~~~~~~~~~~~yl~~R~~~~~~~~-~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~P~V 97 (631)
+..+++++.+++.+.|++||++.+++.. .+...++|++++++|+++.+.++++.+..++|..|...++. .+++.|+|
T Consensus 65 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~--~~~~~P~V 142 (802)
T 4hg6_A 65 PRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL--QPEELPTV 142 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC--CTTTCCCE
T ss_pred hHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC--CccCCCcE
Confidence 3344444555556899999999999854 35677888888999999999999999999999988866543 24678999
Q ss_pred EEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCcccccc
Q 006792 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (631)
Q Consensus 98 dV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (631)
+|+||+|| |+++++.+||.|+++++||.++++|+|+|||++|.|.+.
T Consensus 143 SViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~------------------------------ 189 (802)
T 4hg6_A 143 DILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS------------------------------ 189 (802)
T ss_dssp EEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC------------------------------
T ss_pred EEEEEECC---CCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc------------------------------
Confidence 99999999 777788999999999999999999999999999988531
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEEecc
Q 006792 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE 257 (631)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv~Re 257 (631)
.+|+.+++..+.....+++..+ .++.|+.|+
T Consensus 190 --------~d~~i~~~~~~~~~~l~~~~~~-----------------------------------------~~v~~i~~~ 220 (802)
T 4hg6_A 190 --------PDPELAQKAQERRRELQQLCRE-----------------------------------------LGVVYSTRE 220 (802)
T ss_dssp --------SSHHHHHHHHHHHHHHHHHHHH-----------------------------------------HTCEEEECS
T ss_pred --------CCHHHHHHHHhhhHHHHHHHHh-----------------------------------------cCcEEEEec
Confidence 1122222211111111111100 136788887
Q ss_pred CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CCCCCCceEEEccCcccccCCcc---
Q 006792 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKY--- 333 (631)
Q Consensus 258 krpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~~~--- 333 (631)
++ +++|++|+|.|++. ++||||+++|||++++ ||+|.+++.+|. ||+ +++||+++.+.|.+..
T Consensus 221 ~~----~~GKa~alN~gl~~----a~gd~Il~lDaD~~~~-pd~L~~lv~~~~~dp~----v~~V~~~~~~~~~~~~~~~ 287 (802)
T 4hg6_A 221 RN----EHAKAGNMSAALER----LKGELVVVFDADHVPS-RDFLARTVGYFVEDPD----LFLVQTPHFFINPDPIQRN 287 (802)
T ss_dssp SC----CSHHHHHHHHHHHH----CCCSEEEECCTTEEEC-TTHHHHHHHHHHHSSS----CCEEECCCCBSSCCHHHHH
T ss_pred CC----CCcchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHHhcCCC----eEEEeccEEEeCCchHhhh
Confidence 63 57999999999999 8999999999999997 999999999994 888 7799999999875411
Q ss_pred ----ChHHHHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcc
Q 006792 334 ----DIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFS 409 (631)
Q Consensus 334 ----d~~~~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~ 409 (631)
..+.+....++...+.+.+.+++.+++|+++++||++++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~v----------------------------------- 332 (802)
T 4hg6_A 288 LALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEA----------------------------------- 332 (802)
T ss_dssp HTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHH-----------------------------------
T ss_pred hhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHc-----------------------------------
Confidence 11223346678888999999999999999999999999865
Q ss_pred hhhHHhhcccccccccccccccccccccCCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHhhhhhhhhhh
Q 006792 410 NVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 489 (631)
Q Consensus 410 ~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~RWa~G 489 (631)
|||++++++||.+++++++++||++.|++ ++.+++.+|+|++++++||.||++|
T Consensus 333 ------------------------Ggf~~~~~~ED~~l~~rl~~~G~ri~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~G 386 (802)
T 4hg6_A 333 ------------------------GGFAGETITEDAETALEIHSRGWKSLYID--RAMIAGLQPETFASFIQQRGRWATG 386 (802)
T ss_dssp ------------------------TTCCCSSSSHHHHHHHHHHTTTCCEEECC--CCCEEECCCCSHHHHHHHHHHHHHH
T ss_pred ------------------------CCcCCCCcchHHHHHHHHHHcCCeEEEec--CCEEEecCCCCHHHHHHHHHHHHcc
Confidence 68999999999999999999999999998 5899999999999999999999999
Q ss_pred hhHHHHhhcCCcccCCCCCCHHHHHHhhhhhHhhHHhHHHHHHHHHHHHHHHHcCCcccccchhh
Q 006792 490 LTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVTTN 554 (631)
Q Consensus 490 ~~qi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~~~p~~~~~ 554 (631)
.+|+++.+ +|+..+ ++++.++++|+...+++ +.+++.++++++|++++++|..+++.....
T Consensus 387 ~~q~l~~~-~pl~~~--~l~~~~rl~~l~~~~~~-~~~~~~li~ll~p~~~ll~~~~~~~~~~~~ 447 (802)
T 4hg6_A 387 MMQMLLLK-NPLFRR--GLGIAQRLCYLNSMSFW-FFPLVRMMFLVAPLIYLFFGIEIFVATFEE 447 (802)
T ss_dssp HHHHHHHS-CTTSCS--SCCHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHCCCCSCCCHHH
T ss_pred HHHHHHHh-CccccC--CCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHhhcCHHH
Confidence 99999854 677643 68999999999887777 778889999999999999999887754433
No 2
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.83 E-value=2.6e-20 Score=184.68 Aligned_cols=110 Identities=15% Similarity=0.107 Sum_probs=89.8
Q ss_pred CCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCc
Q 006792 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (631)
Q Consensus 93 ~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p 172 (631)
..|.|+|+||+|| ++ ..+.+||.|+++++||. ++|+|+||||+|.|.+.+.+.++
T Consensus 3 ~~p~vsViIp~yn---~~-~~l~~~l~Sl~~q~~~~--~eiIvvDd~S~d~t~~~~~~~~~------------------- 57 (240)
T 3bcv_A 3 LIPKVSVIVPIYN---VE-KYLDQCVQALLAQTLSD--IEIILIDDESPDNCPKICDDYAA------------------- 57 (240)
T ss_dssp CCCSEEEEEEESS---CT-TTHHHHHHHHHTCSSSS--EEEEEEECCCSSSHHHHHHHHHH-------------------
T ss_pred CCCcEEEEEecCC---CH-HHHHHHHHHHHhCcCCC--eEEEEEECCCCcCHHHHHHHHHh-------------------
Confidence 3689999999999 44 58999999999999995 99999999999988643322100
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEE
Q 006792 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (631)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~ 252 (631)
..|++.
T Consensus 58 --------------------------------------------------------------------------~~~~i~ 63 (240)
T 3bcv_A 58 --------------------------------------------------------------------------QYPNIK 63 (240)
T ss_dssp --------------------------------------------------------------------------HCSSEE
T ss_pred --------------------------------------------------------------------------hCCCEE
Confidence 014577
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCC
Q 006792 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (631)
Q Consensus 253 yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp 312 (631)
++.. + +.|+++|+|.|++. ++||||+++|+|.++. |++|.+++..+.++
T Consensus 64 ~i~~-~-----n~G~~~a~N~g~~~----a~g~~i~~lD~Dd~~~-~~~l~~l~~~~~~~ 112 (240)
T 3bcv_A 64 VIHK-K-----NAGLGMACNSGLDV----ATGEYVAFCDSDDYVD-SDMYMTMYNVAQKY 112 (240)
T ss_dssp EEEC-C-----CCCHHHHHHHHHHH----CCSSEEEECCTTCCCC-TTHHHHHHHHHHHH
T ss_pred EEEC-C-----CCChHHHHHHHHHH----cCCCEEEEECCCCcCC-HHHHHHHHHHHHhc
Confidence 7753 2 36799999999999 8999999999999997 99999999988753
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.83 E-value=9.2e-20 Score=200.55 Aligned_cols=236 Identities=16% Similarity=0.072 Sum_probs=157.9
Q ss_pred CCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChh-chHHHHHHHHhhhhhhhHHHhhCCccC
Q 006792 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPI-TLHGMREACRFAKWWLPFCRRYGIKTI 170 (631)
Q Consensus 92 ~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~-T~~~l~ea~~fa~~w~pfc~~~~v~~r 170 (631)
+.+|.|+|+||+|| |+.+.+.+||.|+++++||...++|+|+||||+|. |.+.+.+.+
T Consensus 26 ~~~p~vSVIIp~yN---~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~------------------ 84 (472)
T 1xhb_A 26 DNLPTTSVVIVFHN---EAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYV------------------ 84 (472)
T ss_dssp SCCCCEEEEEEESS---CCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHH------------------
T ss_pred cCCCCeEEEEEeCC---CCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHH------------------
Confidence 56899999999999 66569999999999999997678999999999984 654332210
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCC-
Q 006792 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMP- 249 (631)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P- 249 (631)
..+|
T Consensus 85 ---------------------------------------------------------------------------~~~~~ 89 (472)
T 1xhb_A 85 ---------------------------------------------------------------------------KKLKV 89 (472)
T ss_dssp ---------------------------------------------------------------------------HSSSS
T ss_pred ---------------------------------------------------------------------------HHCCC
Confidence 0124
Q ss_pred cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CCCCCCceEEEccCcc-c
Q 006792 250 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQK-F 327 (631)
Q Consensus 250 ~l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~-f 327 (631)
++.++..++| .|+++|+|.|++. ++||+|+++|+|..++ |++|.+++..+. +|. ++++ |.. .
T Consensus 90 ~v~vi~~~~n-----~G~~~a~N~g~~~----A~gd~i~flD~D~~~~-p~~L~~ll~~~~~~~~----~~v~--~~~~~ 153 (472)
T 1xhb_A 90 PVHVIRMEQR-----SGLIRARLKGAAV----SRGQVITFLDAHCECT-AGWLEPLLARIKHDRR----TVVC--PIIDV 153 (472)
T ss_dssp CEEEEECSSC-----CCHHHHHHHHHHH----CCSSEEEEEESSEEEC-TTCHHHHHHHHHHCTT----EEEE--EEEEE
T ss_pred cEEEEECCCC-----CChHHHHHHHHHh----ccCCeEEEECCCeEeC-ccHHHHHHHHHHhCCC----EEEE--eeeee
Confidence 5778876654 5699999999999 8999999999999997 999999999887 665 2222 111 1
Q ss_pred ccCCcc------C----hHHHHH-----HHHHHHHHHHh-h---hcCCcceeeeeeeeehhhhccccCcchhhhhhcCch
Q 006792 328 HNINKY------D----IYDGRF-----RSAYCVQWQGM-D---GLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSN 388 (631)
Q Consensus 328 ~n~~~~------d----~~~~~~-----~~f~~~~~~g~-d---~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~ 388 (631)
.+.+.- . .+.-.. ..-........ + ....+..+|++.++||+++..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~i-------------- 219 (472)
T 1xhb_A 154 ISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEI-------------- 219 (472)
T ss_dssp ECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHT--------------
T ss_pred EcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHc--------------
Confidence 110000 0 000000 00000000000 1 1223345677778999999866
Q ss_pred HHHHhHhhhhhcccCCCCCcchhhHHhhcccccccccccccccccccccCCcc---cchHHHHHHHHhcCCeEEEeCCCC
Q 006792 389 VLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSV---SEDLFTGFILHCKGWTSTYLTPFR 465 (631)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sl---tED~~t~~rl~~~Gwrs~y~~~~~ 465 (631)
|||+++.. .||+++++|+...|+++.|++.
T Consensus 220 ---------------------------------------------Ggfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~-- 252 (472)
T 1xhb_A 220 ---------------------------------------------GTYDAGMDIWGGENLEISFRIWQCGGTLEIVTC-- 252 (472)
T ss_dssp ---------------------------------------------TSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEE--
T ss_pred ---------------------------------------------CCCCCcccccCchhHHHHHHHHhcCCeEEEccC--
Confidence 56776543 6999999999999999999873
Q ss_pred CeeEe----ecCCC---------HHHHhhhhhhhhhhhhHHHHhhcCCc
Q 006792 466 PQFLG----TSTTN---------LNDLLIQGTRWGSGLTDVGLSRFCPL 501 (631)
Q Consensus 466 ~~~~g----~aP~t---------l~~~~~Qr~RWa~G~~qi~~~~~~p~ 501 (631)
+...- ..|.+ .....+...||..+..+.++.+ .|.
T Consensus 253 ~~v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~~-~p~ 300 (472)
T 1xhb_A 253 SHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYII-SPG 300 (472)
T ss_dssp EEEEEEC------------CHHHHHHHHHHHHHHCGGGGHHHHHT-STT
T ss_pred cEEEEEccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhh-Ccc
Confidence 33211 12221 3456777789999999988754 453
No 4
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.81 E-value=7.7e-20 Score=183.19 Aligned_cols=220 Identities=12% Similarity=0.038 Sum_probs=138.2
Q ss_pred CceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCccc
Q 006792 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (631)
Q Consensus 95 P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (631)
|.|+|+||+|| ++ ..+.+||.|+++++||. ++|+|+||||+|.|.+.+.+.+
T Consensus 1 p~vSViIp~yn---~~-~~l~~~l~Sl~~q~~~~--~eiivvDd~S~d~t~~~~~~~~---------------------- 52 (255)
T 1qg8_A 1 PKVSVIMTSYN---KS-DYVAKSISSILSQTFSD--FELFIMDDNSNEETLNVIRPFL---------------------- 52 (255)
T ss_dssp CCEEEEEEESS---CT-TTHHHHHHHHHTCSCCC--EEEEEEECSCCHHHHHHHGGGG----------------------
T ss_pred CeEEEEEEcCC---CH-HHHHHHHHHHHhccCCc--eEEEEEECCCCchHHHHHHHHh----------------------
Confidence 78999999999 44 58999999999999995 9999999999997753221100
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEEE
Q 006792 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYV 254 (631)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~yv 254 (631)
..|++.++
T Consensus 53 ------------------------------------------------------------------------~~~~i~~i 60 (255)
T 1qg8_A 53 ------------------------------------------------------------------------NDNRVRFY 60 (255)
T ss_dssp ------------------------------------------------------------------------GSTTEEEE
T ss_pred ------------------------------------------------------------------------hcCCEEEE
Confidence 01357777
Q ss_pred eccCCC---CCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CCCCCCceEEEccCcccc--
Q 006792 255 SREKRP---EHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFH-- 328 (631)
Q Consensus 255 ~Rekrp---g~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~-- 328 (631)
..+... ...+.|+++|+|.|++. ++||||+++|+|.++. |++|.+++..+. +|+. ++|.+.....
T Consensus 61 ~~~~~~~~~~~~n~G~~~a~N~gi~~----a~g~~i~~lD~Dd~~~-~~~l~~~~~~~~~~~~~----~~v~~~~~~~~~ 131 (255)
T 1qg8_A 61 QSDISGVKERTEKTRYAALINQAIEM----AEGEYITYATDDNIYM-PDRLLKMVRELDTHPEK----AVIYSASKTYHL 131 (255)
T ss_dssp ECCCCSHHHHHSSCHHHHHHHHHHHH----CCCSEEEEEETTEEEC-TTHHHHHHHHHHHCTTC----CEEEEEEEEEEE
T ss_pred ecccccccccccccCHHHHHHHHHHH----cCCCEEEEeCCCCccC-hHHHHHHHHHHHhCCCc----eEEEeceEEEEe
Confidence 765100 00135799999999999 8999999999999997 999999999887 6774 4454443332
Q ss_pred cCCccChHHHHHHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCc
Q 006792 329 NINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENF 408 (631)
Q Consensus 329 n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~ 408 (631)
+.+.. ......... ...........+|++.++||+++..++
T Consensus 132 ~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~rr~~~~~~g--------------------------------- 172 (255)
T 1qg8_A 132 NENRD-IVKETVRPA-----AQVTWNAPCAIDHCSVMHRYSVLEKVK--------------------------------- 172 (255)
T ss_dssp C---C-EEEEEEECC-----CSCBSCCTTTSCGGGEEEETHHHHHHH---------------------------------
T ss_pred CCCCc-chhhccCch-----HHHHHhhcCCCccceEEEEHHHHHhhc---------------------------------
Confidence 21110 000000000 000112233467888999999997652
Q ss_pred chhhHHhhcccccccccccccccccccc------c-CCcccchHHHHHHHHhcCCeEEEeCCCCCeeEeecCCCHHHHh-
Q 006792 409 SNVLQEETGVLASCSYEHQTKWGEEVGI------L-YQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLL- 480 (631)
Q Consensus 409 ~~~~~~~a~~~~~c~ye~~t~wg~e~G~------~-~~sltED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~- 480 (631)
+|| . .....||.++.+++..+| ++.|++. ....+..-+.+.....
T Consensus 173 -------------------------~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~-~~~~~r~~~~s~s~~~~ 225 (255)
T 1qg8_A 173 -------------------------EKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDE-ELDLNYITDQSIHFQLF 225 (255)
T ss_dssp -------------------------HHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEE-EEEEEEEC---------
T ss_pred -------------------------ccccccccCCcccchHHHHHHHHHHHHhC-CEEEecC-cEEEEEEcCCccchhHH
Confidence 134 1 124579999999999987 6888874 2334455666666554
Q ss_pred -hhhhhhhhh
Q 006792 481 -IQGTRWGSG 489 (631)
Q Consensus 481 -~Qr~RWa~G 489 (631)
.|+.+|.+.
T Consensus 226 ~~~~~~~~~~ 235 (255)
T 1qg8_A 226 ELEKNEFVRN 235 (255)
T ss_dssp -----CTGGG
T ss_pred HHHHHHHHHh
Confidence 455555443
No 5
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.81 E-value=2.7e-19 Score=203.45 Aligned_cols=211 Identities=17% Similarity=0.152 Sum_probs=147.2
Q ss_pred CCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCc
Q 006792 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (631)
Q Consensus 93 ~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p 172 (631)
..|.|+|+||+|| |+ +.+.+||.|+++++||. .++|+|+|||++|.|.+.+.+ +.
T Consensus 91 ~~p~vsviIp~~n---~~-~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~~~~--------------~~------ 145 (625)
T 2z86_A 91 IIDGLSIVIPTYN---RA-KILAITLACLCNQKTIY-DYEVIVADDGSKENIEEIVRE--------------FE------ 145 (625)
T ss_dssp CCCCEEEEEEESS---CH-HHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHHHHT--------------TT------
T ss_pred cCCcEEEEEecCC---cH-HHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHHHHHH--------------hh------
Confidence 4589999999999 65 79999999999999886 699999999999976532111 00
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEE
Q 006792 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (631)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~ 252 (631)
..+++.
T Consensus 146 --------------------------------------------------------------------------~~~~i~ 151 (625)
T 2z86_A 146 --------------------------------------------------------------------------SLLNIK 151 (625)
T ss_dssp --------------------------------------------------------------------------TTSCEE
T ss_pred --------------------------------------------------------------------------hcCCeE
Confidence 002467
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CCCCCCceEEEccCcccccCC
Q 006792 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNIN 331 (631)
Q Consensus 253 yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~ 331 (631)
|+.+++ +.++|++|+|.|++. ++||+|+++|+|+++. |++|.+++..|. +|. +++|+..+.+.+..
T Consensus 152 ~i~~~~----~~~g~~~a~N~g~~~----a~g~~v~~lD~D~~~~-~~~l~~~~~~~~~~~~----~~~~g~~~~~~~~~ 218 (625)
T 2z86_A 152 YVRQKD----YGYQLCAVRNLGLRA----AKYNYVAILDCDMAPN-PLWVQSYMELLAVDDN----VALIGPRKYIDTSK 218 (625)
T ss_dssp EEEECC----CSCCHHHHHHHHHHH----CCSSEEEEECTTEEEC-TTHHHHHHHHHHHCTT----EEEECCEEEECCTT
T ss_pred EEEeCC----CCcchhHHHHHHHHh----CCcCEEEEECCCCCCC-HHHHHHHHHHHhcCCc----eEEEEeeeeccCcc
Confidence 777653 245799999999999 8999999999999997 999999999887 676 66666555443321
Q ss_pred ccChHHHHH---------------HHHHH------------HHHHHhhh---cCC--cceeeeeeeeehhhhccccCcch
Q 006792 332 KYDIYDGRF---------------RSAYC------------VQWQGMDG---LKG--PVLSGTGYYIKRESLYADFTHTE 379 (631)
Q Consensus 332 ~~d~~~~~~---------------~~f~~------------~~~~g~d~---~~~--~~~~Gsg~~~RR~AL~~~~~~~~ 379 (631)
..+.... ..+.. ......+. ... ..++|++.++||+++..+
T Consensus 219 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~i----- 291 (625)
T 2z86_A 219 --HTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRA----- 291 (625)
T ss_dssp --CCHHHHHHSTTGGGTSCC---------------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHH-----
T ss_pred --cchhhcccchHHhhhcchhccCCchhhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHh-----
Confidence 0000000 00000 00000111 111 247889999999999865
Q ss_pred hhhhhcCchHHHHhHhhhhhcccCCCCCcchhhHHhhcccccccccccccccccccccCCcc---cchHHHHHHHHhcCC
Q 006792 380 LKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSV---SEDLFTGFILHCKGW 456 (631)
Q Consensus 380 ~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sl---tED~~t~~rl~~~Gw 456 (631)
|||+.... .||.++++|++.+||
T Consensus 292 ------------------------------------------------------Ggfde~~~~~g~ED~dl~~Rl~~~G~ 317 (625)
T 2z86_A 292 ------------------------------------------------------GWFDEEFTHWGGEDNEFGYRLYREGC 317 (625)
T ss_dssp ------------------------------------------------------CCCCTTCSSCCCHHHHHHHHHHHTTC
T ss_pred ------------------------------------------------------CCCccccccCCcchhhhhhhHHhCCc
Confidence 56776654 599999999999999
Q ss_pred eEEEeCCCCCeeEeecCCCHHH
Q 006792 457 TSTYLTPFRPQFLGTSTTNLND 478 (631)
Q Consensus 457 rs~y~~~~~~~~~g~aP~tl~~ 478 (631)
++.|++ .+.++-..|.+-..
T Consensus 318 ~i~~~p--~~~v~H~~~~~~~~ 337 (625)
T 2z86_A 318 YFRSVE--GAMAYHQEPPGKEN 337 (625)
T ss_dssp EEEECG--GGCEEEECCC----
T ss_pred eEEEcc--cchhhccCCccccc
Confidence 999998 46777777765443
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.77 E-value=3e-18 Score=193.68 Aligned_cols=237 Identities=16% Similarity=0.072 Sum_probs=157.4
Q ss_pred CCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhc-hHHHHHHHHhhhhhhhHHHhhCCccC
Q 006792 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPIT-LHGMREACRFAKWWLPFCRRYGIKTI 170 (631)
Q Consensus 92 ~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T-~~~l~ea~~fa~~w~pfc~~~~v~~r 170 (631)
+.+|.|+|+||+|| |+.+.+.+||.|+++++||...++|+|+||||+|.| .+.+.+.+
T Consensus 109 ~~~P~vSVIIp~yN---e~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~------------------ 167 (570)
T 2d7i_A 109 ETLPNTSIIIPFHN---EGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYM------------------ 167 (570)
T ss_dssp SSCCCEEEEEEESS---CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHH------------------
T ss_pred CCCCCeEEEEEECC---CCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHH------------------
Confidence 56899999999999 665799999999999999975579999999999988 33221100
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCc
Q 006792 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (631)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~ 250 (631)
...|+
T Consensus 168 ---------------------------------------------------------------------------~~~~~ 172 (570)
T 2d7i_A 168 ---------------------------------------------------------------------------ALFPS 172 (570)
T ss_dssp ---------------------------------------------------------------------------TTSTT
T ss_pred ---------------------------------------------------------------------------HhCCe
Confidence 01246
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CCCCCCceEEEccCccccc
Q 006792 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHN 329 (631)
Q Consensus 251 l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n 329 (631)
+.++..+++ .|+++|+|.|++. ++||||+++|+|..++ |++|.+++..+. +|. + .|.....+.+
T Consensus 173 v~vi~~~~n-----~G~~~A~N~G~~~----A~gd~i~fLD~D~~~~-p~~L~~ll~~l~~~~~----~-vv~~~i~~~~ 237 (570)
T 2d7i_A 173 VRILRTKKR-----EGLIRTRMLGASV----ATGDVITFLDSHCEAN-VNWLPPLLDRIARNRK----T-IVCPMIDVID 237 (570)
T ss_dssp EEEEECSSC-----CCHHHHHHHHHHH----CCSSEEEECCSSEEEC-TTCSHHHHHHHHHCTT----E-EEEEEEEEEC
T ss_pred EEEEECCCC-----CCHHHHHHHHHHh----cCCCEEEEEcCCcccc-ccHHHHHHHHHHhCCC----E-EEeeeeeccC
Confidence 788876653 5799999999999 8999999999999997 999999999887 443 2 1211111111
Q ss_pred CCc-------cChHHHH--HHHHHHHHHH----H----hhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHH
Q 006792 330 INK-------YDIYDGR--FRSAYCVQWQ----G----MDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLIN 392 (631)
Q Consensus 330 ~~~-------~d~~~~~--~~~f~~~~~~----g----~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~ 392 (631)
.+. ....... ...++..... . ......+..+|++.++||+++..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~i------------------ 299 (570)
T 2d7i_A 238 HDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWEL------------------ 299 (570)
T ss_dssp TTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHT------------------
T ss_pred CCchhhccccCCcccccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHHhc------------------
Confidence 000 0000000 0000000000 0 001122345688888999999766
Q ss_pred hHhhhhhcccCCCCCcchhhHHhhcccccccccccccccccccccCCcc---cchHHHHHHHHhcCCeEEEeCCCCCeeE
Q 006792 393 SLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSV---SEDLFTGFILHCKGWTSTYLTPFRPQFL 469 (631)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~sl---tED~~t~~rl~~~Gwrs~y~~~~~~~~~ 469 (631)
|||+.+.. .||+++++|+...||+++|++. +.+.
T Consensus 300 -----------------------------------------GgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~--~~v~ 336 (570)
T 2d7i_A 300 -----------------------------------------GGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPC--SRVG 336 (570)
T ss_dssp -----------------------------------------TSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEE--EEEE
T ss_pred -----------------------------------------CCCCCcccccCcchHHHHHHHHhCCCeEEEccC--eEEE
Confidence 56766543 6999999999999999999873 3322
Q ss_pred e----ecCCC-------HHHHhhhhhhhhhhhhHHHHhhcCCc
Q 006792 470 G----TSTTN-------LNDLLIQGTRWGSGLTDVGLSRFCPL 501 (631)
Q Consensus 470 g----~aP~t-------l~~~~~Qr~RWa~G~~qi~~~~~~p~ 501 (631)
- ..|.+ .....+-..||.....+.++.+ +|.
T Consensus 337 H~~r~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y~~-~p~ 378 (570)
T 2d7i_A 337 HIYRKYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR-RPE 378 (570)
T ss_dssp ECCCSSCCSCCCSSCCHHHHHHHHHHHHCGGGHHHHHTT-CGG
T ss_pred EEccccCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhc-Ccc
Confidence 1 23321 3456667789999998887754 353
No 7
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.77 E-value=1.9e-18 Score=191.81 Aligned_cols=113 Identities=16% Similarity=0.092 Sum_probs=93.5
Q ss_pred CCCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccC
Q 006792 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (631)
Q Consensus 91 ~~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r 170 (631)
++.+|.|+|+||+|| |+...+.+||.|++++.||...+||+|+||||+|.|...+.
T Consensus 62 ~~~~p~vSVIIp~yN---~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~--------------------- 117 (501)
T 2ffu_A 62 RVDLPATSVVITFHN---EARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALL--------------------- 117 (501)
T ss_dssp CSSCCCEEEEEEESS---CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGG---------------------
T ss_pred CcCCCCEEEEEEeCc---CcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHH---------------------
Confidence 356899999999999 66348999999999999997667999999999997642110
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCc
Q 006792 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (631)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~ 250 (631)
...|+
T Consensus 118 ---------------------------------------------------------------------------~~~~~ 122 (501)
T 2ffu_A 118 ---------------------------------------------------------------------------GKIEK 122 (501)
T ss_dssp ---------------------------------------------------------------------------GGBTT
T ss_pred ---------------------------------------------------------------------------hcCCC
Confidence 01246
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCC
Q 006792 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 312 (631)
Q Consensus 251 l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp 312 (631)
+.++..+++ .|+++|+|.|++. ++||+|+++|+|.+++ |++|.+++..+.+.
T Consensus 123 v~vi~~~~n-----~G~~~A~N~G~~~----A~gd~i~flD~D~~~~-p~~L~~ll~~~~~~ 174 (501)
T 2ffu_A 123 VRVLRNDRR-----EGLMRSRVRGADA----AQAKVLTFLDSHCECN-EHWLEPLLERVAED 174 (501)
T ss_dssp EEEEECSSC-----CHHHHHHHHHHHH----CCSSEEEECCSSEEEC-TTCHHHHHHHHHHC
T ss_pred EEEEECCCC-----cCHHHHHHHHHHh----cCCCEEEEECCCcccC-ccHHHHHHHHHHhC
Confidence 788876653 5699999999999 8999999999999997 99999999988743
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.75 E-value=4.3e-18 Score=193.54 Aligned_cols=219 Identities=18% Similarity=0.173 Sum_probs=153.1
Q ss_pred CCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCc
Q 006792 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (631)
Q Consensus 93 ~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p 172 (631)
..|.|+|+||||| ++ ..+.+||.|+++++||. ++|+|+||||+|.|.+.+.+..
T Consensus 373 ~~~~vsiii~~yn---~~-~~l~~~l~s~~~q~~~~--~eiivvdd~S~d~t~~~~~~~~-------------------- 426 (625)
T 2z86_A 373 RVPLVSIYIPAYN---CS-KYIVRCVESALNQTITD--LEVCICDDGSTDDTLRILQEHY-------------------- 426 (625)
T ss_dssp SSCSEEEEEEESS---CT-TTHHHHHHHHHSSSCCS--EEEEEEEESCSSSHHHHHHHHH--------------------
T ss_pred cCCeEEEEEeCCC---CH-HHHHHHHHHHHhCcCCC--eEEEEEECcCChhHHHHHHHHH--------------------
Confidence 4689999999999 44 58999999999999985 9999999999998864332210
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEE
Q 006792 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLV 252 (631)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~ 252 (631)
...|++.
T Consensus 427 -------------------------------------------------------------------------~~~~~i~ 433 (625)
T 2z86_A 427 -------------------------------------------------------------------------ANHPRVR 433 (625)
T ss_dssp -------------------------------------------------------------------------TTCTTEE
T ss_pred -------------------------------------------------------------------------hhCCcEE
Confidence 0114567
Q ss_pred EEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CCCCCCceEEEccCcccccCC
Q 006792 253 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNIN 331 (631)
Q Consensus 253 yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~~g~~vg~VQ~pq~f~n~~ 331 (631)
++. ++ +.|+++|+|.|++. ++||||+++|+|.++. |++|.+++..|. +|++ ++|.+...+.+.+
T Consensus 434 ~~~-~~-----n~G~~~a~n~g~~~----a~g~~i~~ld~D~~~~-~~~l~~~~~~~~~~~~~----~~v~~~~~~~~~~ 498 (625)
T 2z86_A 434 FIS-QK-----NKGIGSASNTAVRL----CRGFYIGQLDSDDFLE-PDAVELCLDEFRKDLSL----ACVYTTNRNIDRE 498 (625)
T ss_dssp EEE-EC-----CCCHHHHHHHHHHH----CCSSEEEECCTTCEEC-TTHHHHHHHHHHHCTTC----SEEEEEEEEECTT
T ss_pred EEe-CC-----CCCHHHHHHHHHHh----cCCCEEEEECCCcccC-hhHHHHHHHHHHhCCCe----eEEEeeeEEECCC
Confidence 775 33 36799999999999 8999999999999997 999999998885 7874 4555544333322
Q ss_pred ccChHHHH--HHHHHHHHHHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcc
Q 006792 332 KYDIYDGR--FRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFS 409 (631)
Q Consensus 332 ~~d~~~~~--~~~f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~ 409 (631)
.. ..... ... + ..+.+....++|++.++||+++..+
T Consensus 499 ~~-~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~r~~~~~~----------------------------------- 536 (625)
T 2z86_A 499 GN-LISNGYNWPI-Y-----SREKLTSAMICHHFRMFTARAWNLT----------------------------------- 536 (625)
T ss_dssp SC-EEEECCCCSS-C-----CHHHHTTSCCCCSCEEEEHHHHTTT-----------------------------------
T ss_pred CC-EeccCccccc-C-----CHHHHhhcccCCceEEEEHHHHHHh-----------------------------------
Confidence 11 00000 000 0 0111234457788899999998765
Q ss_pred hhhHHhhcccccccccccccccccccccCC-cccchHHHHHHHHhcCCeEEEeCCCCCeeE---eecCCCHHHHhhhhhh
Q 006792 410 NVLQEETGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTPFRPQFL---GTSTTNLNDLLIQGTR 485 (631)
Q Consensus 410 ~~~~~~a~~~~~c~ye~~t~wg~e~G~~~~-sltED~~t~~rl~~~Gwrs~y~~~~~~~~~---g~aP~tl~~~~~Qr~R 485 (631)
|||+.. ...||.++.+|+...| ++.|++. +... .....+.+....|+.+
T Consensus 537 ------------------------ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~--~~~~~r~h~~~~s~~~~~~~~~~ 589 (625)
T 2z86_A 537 ------------------------EGFNESISNAVDYDMYLKLSEVG-PFKHINK--ICYNRVLHGENTSIKKLDIQKEN 589 (625)
T ss_dssp ------------------------TCCCSSCSSCHHHHHHHHHTTTS-CEEEEEE--EEEEEECC----CCSSHHHHHHH
T ss_pred ------------------------CCCCCccCChHHHHHHHHHHHhC-CEEEeCC--cEEEEEECCCccchhhHHHHHHH
Confidence 577655 4579999999999999 8999873 4443 3345566667778877
Q ss_pred hhhhhhHHH
Q 006792 486 WGSGLTDVG 494 (631)
Q Consensus 486 Wa~G~~qi~ 494 (631)
|.+...+.+
T Consensus 590 ~~~~~~~~l 598 (625)
T 2z86_A 590 HFKVVNESL 598 (625)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 766555544
No 9
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.66 E-value=5.4e-16 Score=163.19 Aligned_cols=117 Identities=15% Similarity=0.033 Sum_probs=88.3
Q ss_pred CCCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCC
Q 006792 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (631)
Q Consensus 92 ~~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~ 171 (631)
...|.|+|+||+|| |+ ..+.++|.|+++++||. ..+|+|+||||+|.|.+.+.+ ++.
T Consensus 45 ~~~~~vSViIp~yN---~~-~~l~~~l~sl~~q~~~~-~~eiivVDdgS~D~t~~~~~~--------------~~~---- 101 (329)
T 3ckj_A 45 KAGRTISVVLPALD---EE-DTIGSVIDSISPLVDGL-VDELIVLDSGSTDDTEIRAVA--------------AGA---- 101 (329)
T ss_dssp TTTCCEEEEEEESS---CT-TTHHHHHHHHGGGBTTT-BSEEEEEECSCCSSHHHHHHH--------------TTC----
T ss_pred ccCCcEEEEEeeCC---CH-HHHHHHHHHHHHhhCCC-CcEEEEEeCCCCchHHHHHHH--------------hhh----
Confidence 34689999999999 44 47999999999999994 589999999999988643222 100
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcE
Q 006792 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLL 251 (631)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l 251 (631)
++ .+++
T Consensus 102 --------------------------------------------------------~~------------------~~~~ 107 (329)
T 3ckj_A 102 --------------------------------------------------------RV------------------VSRE 107 (329)
T ss_dssp --------------------------------------------------------EE------------------EEHH
T ss_pred --------------------------------------------------------hh------------------ccce
Confidence 00 0011
Q ss_pred EEEe-ccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCC-CCChHHHHHHHHhh-cCCCCC
Q 006792 252 VYVS-REKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFH-LDPKIS 315 (631)
Q Consensus 252 ~yv~-Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~-~~~pd~L~~~v~~f-~Dp~~g 315 (631)
.++. .+ .+.||++|+|.|++. ++||||+++|+|.+ +. |++|.+++..+ .+|+.+
T Consensus 108 ~~~~~~~-----~n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~~-p~~l~~l~~~l~~~~~~~ 164 (329)
T 3ckj_A 108 QALPEVP-----IRPGKGEALWRSLAA----SRGDIVVFVDSDLINPH-PMFVPWLVGPLLTGDGVH 164 (329)
T ss_dssp HHCTTSC-----CCCSHHHHHHHHHHH----CCCSEEEECCTTEESCC-TTHHHHHHHHHHSCSSCC
T ss_pred eeeccCC-----CCCCHHHHHHHHHHh----CCCCEEEEECCCCCCcC-hHHHHHHHHHHHhCCCcc
Confidence 1121 22 246899999999999 89999999999999 76 99999999874 578744
No 10
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.61 E-value=2e-15 Score=173.18 Aligned_cols=120 Identities=17% Similarity=0.116 Sum_probs=88.4
Q ss_pred CCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCce-EEEEEcCCCChhch-HHHHHHHHhhhhhhhHHHhhCCccC
Q 006792 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKL-HVYLSDDGGSPITL-HGMREACRFAKWWLPFCRRYGIKTI 170 (631)
Q Consensus 93 ~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl-~V~V~DDg~~~~T~-~~l~ea~~fa~~w~pfc~~~~v~~r 170 (631)
.-|+|+|+||||| ++ +.+.++|.|+++++|+.++. +|+|+||||+|.+- ..+.+..
T Consensus 178 ~~pkVSVVIptYN---~~-~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~------------------ 235 (657)
T 4fix_A 178 GTANIAVGIPTFN---RP-ADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAA------------------ 235 (657)
T ss_dssp SCCCEEEECCBSS---CH-HHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHH------------------
T ss_pred CCCeEEEEEEecC---CH-HHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHH------------------
Confidence 4589999999999 54 68999999999999955444 99999999997421 1111100
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCc
Q 006792 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (631)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~ 250 (631)
++. .|+
T Consensus 236 -------------------------------~~~-------------------------------------------~~~ 241 (657)
T 4fix_A 236 -------------------------------ARL-------------------------------------------GSR 241 (657)
T ss_dssp -------------------------------HHH-------------------------------------------GGG
T ss_pred -------------------------------Hhc-------------------------------------------CCC
Confidence 000 135
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CCCCC
Q 006792 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKIS 315 (631)
Q Consensus 251 l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~~g 315 (631)
+.++..+ +.|.|+|.|.|++.+....++|||+++|+|.++. |++|.+++.++. +|+++
T Consensus 242 I~vI~~~------N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~-pd~L~~ll~~l~~~~~~~ 300 (657)
T 4fix_A 242 LSIHDQP------NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRLE-PDSILRVLAMHRFAKAPM 300 (657)
T ss_dssp EEEEECC------CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEEC-THHHHHHHHHHHHBSSCC
T ss_pred EEEEECC------CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCccC-hhHHHHHHHHHHhCCCcE
Confidence 7777643 3579999999999831111679999999999998 999999999886 56643
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.61 E-value=5.3e-17 Score=188.40 Aligned_cols=196 Identities=11% Similarity=0.065 Sum_probs=0.0
Q ss_pred CCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccCCcc
Q 006792 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQ 173 (631)
Q Consensus 94 ~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r~p~ 173 (631)
.|.|+|+||||| ++ ..+.+||.|+++++||. +||+|+||||+|.|.+.+.+.++
T Consensus 1 Mp~vSVIIp~yN---~~-~~L~~~L~Sll~Qt~~~--~EIIVVDDgStD~t~~il~~~~~-------------------- 54 (729)
T 3l7i_A 1 MNKLTIIVTYYN---AE-EYITGCLESIKQQRTQD--FNLIIVNDGSTDQSKKLMDEAIK-------------------- 54 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCC---CH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCCcHHHHHHHHHH--------------------
Confidence 378999999999 44 58999999999999995 99999999999988643322100
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCcEEE
Q 006792 174 AYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVY 253 (631)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~l~y 253 (631)
.| + +++.+
T Consensus 55 --------------------------~~----------------------~------------------------~~i~~ 62 (729)
T 3l7i_A 55 --------------------------DY----------------------D------------------------KNIRF 62 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------hC----------------------C------------------------CCEEE
Confidence 00 0 24666
Q ss_pred EeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCCcc
Q 006792 254 VSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKY 333 (631)
Q Consensus 254 v~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~ 333 (631)
+..++ +.|+++|+|.|++. ++||||+++|+|.++. |++|.+++..+.+++ +.+... ..+.. ..
T Consensus 63 i~~~~-----n~G~~~arN~gi~~----A~gdyI~flD~Dd~~~-p~~l~~l~~~l~~~d----~v~~~~-~~~~~-~~- 125 (729)
T 3l7i_A 63 IDLDE-----NSGHAHARNIALEE----VETPYFMFLDADDELA-SYAITFYLEKFNNTD----GLIAPI-HSFTT-QR- 125 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EECCC-----CCCHHHHHHHHHHh----ccCCEEEEECCCCCCC-hhHHHHHHHHhcCCC----EEEEee-EEeec-CC-
Confidence 66554 35799999999999 8999999999999997 999999999887544 222211 11111 11
Q ss_pred ChHHHHHHHHHHHHHHHhhhcCCc--ceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcchh
Q 006792 334 DIYDGRFRSAYCVQWQGMDGLKGP--VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNV 411 (631)
Q Consensus 334 d~~~~~~~~f~~~~~~g~d~~~~~--~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (631)
............. ..+....... ...|.+.++||+++..++
T Consensus 126 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~rr~~l~~~g------------------------------------ 168 (729)
T 3l7i_A 126 PQFVDLDRVRVEY-FNAKENINSFLRKQSACNIIFRTAIVRAHH------------------------------------ 168 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred Cccccccceeeee-ecchhhHHHHhhccchhheeeeHHHHHHcC------------------------------------
Confidence 1110000000000 0001111111 235667799999997651
Q ss_pred hHHhhcccccccccccccccccccccCC-cccchHHHHHHHHhcCCeEEEeCC
Q 006792 412 LQEETGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTP 463 (631)
Q Consensus 412 ~~~~a~~~~~c~ye~~t~wg~e~G~~~~-sltED~~t~~rl~~~Gwrs~y~~~ 463 (631)
.||+.+ ...||.++.+++..+|+++.|+++
T Consensus 169 ----------------------l~fde~~~~~ED~d~~~rl~~~g~~i~~~~~ 199 (729)
T 3l7i_A 169 ----------------------IRFNENLNTYVDWSFVLEYMKYVNKFVRIFN 199 (729)
T ss_dssp -----------------------------------------------------
T ss_pred ----------------------CCcCCCCCcccCHHHHHHHHHhcCCEEEecC
Confidence 267665 368999999999999999999943
No 12
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.52 E-value=2.5e-13 Score=146.54 Aligned_cols=121 Identities=17% Similarity=0.066 Sum_probs=87.4
Q ss_pred CCCceEEEEeccCCCCCChHHHHHHHHHHHc--CCCCCCceEEEEEcCCCChhchHHHHHHHHhhhhhhhHHHhhCCccC
Q 006792 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMA--LDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (631)
Q Consensus 93 ~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~--~dYP~~kl~V~V~DDg~~~~T~~~l~ea~~fa~~w~pfc~~~~v~~r 170 (631)
..|.|+|+||+|| |. +.+.++|.++.+ ++||. ..+|+|+||||+|.|.+.+.+ ++.
T Consensus 92 ~~p~vSVVIP~yN---e~-~~l~~~l~sl~~~l~~~~~-~~EIIVVDDgStD~T~~i~~~--------------~~~--- 149 (387)
T 3f1y_A 92 LGLTVSAVLPSRN---VA-DTVGGIIDEIHALNERAPL-IDQILVVDADSEDGTAGVAAS--------------HGA--- 149 (387)
T ss_dssp HTCCEEEEEEESS---CT-TTHHHHHHHHHHHHHHSCC-CSEEEEEECSCSSSHHHHHHH--------------TTC---
T ss_pred CCCeEEEEEEcCC---CH-HHHHHHHHHHHHHHhcCCC-CeEEEEEcCcCCccHHHHHHH--------------hCc---
Confidence 3589999999999 44 478999999987 47765 379999999999988643222 100
Q ss_pred CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCccceeeeecccCcchhhhhccccCCCc
Q 006792 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL 250 (631)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~~i~~~~~~g~~~~~~~h~~ii~v~~~~~~~~~~~~~~~~~~~P~ 250 (631)
+++. +.
T Consensus 150 ---------------------------------------------------------~v~~-----------------~~ 155 (387)
T 3f1y_A 150 ---------------------------------------------------------EVYS-----------------EN 155 (387)
T ss_dssp ---------------------------------------------------------EEEE-----------------GG
T ss_pred ---------------------------------------------------------hhcc-----------------cc
Confidence 0000 00
Q ss_pred EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCC-CCChHHHHHHHHhhc-CCCCCCceE
Q 006792 251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFHL-DPKISSSLA 319 (631)
Q Consensus 251 l~yv~Rekrpg~~~~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~-~~~pd~L~~~v~~f~-Dp~~g~~vg 319 (631)
+.++..++ +.||++|+|.|++. ++||||+++|||.. +. |++|.+++..+. +|+.+..+|
T Consensus 156 ~~~i~~~~-----n~G~g~A~n~G~~~----A~gd~i~~lDaD~~~~~-p~~L~~l~~~l~~~p~~d~v~G 216 (387)
T 3f1y_A 156 ELMSGYGD-----AHGKGDAMWRALSV----TRGDLVLYIDADTRDFR-PQLAYGVLGPVLEVPGVRFVKA 216 (387)
T ss_dssp GTTGGGCS-----CCSHHHHHHHHTTT----CCSSEEEECCTTCSSCC-THHHHTTHHHHHHSTTCCEEEE
T ss_pred eeEecCCc-----cCCHHHHHHHHHHh----cCCCEEEEEcCCCCcCC-HHHHHHHHHHHHHCCCceEEEE
Confidence 11122232 46799999999999 89999999999999 76 999999998885 677443333
No 13
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.51 E-value=3.7e-14 Score=147.15 Aligned_cols=134 Identities=11% Similarity=-0.011 Sum_probs=87.1
Q ss_pred hHHHHHHHH----HhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCCCCCceEEEccCcccccCCccChHHHHHHH
Q 006792 267 KAGALNVLL----RVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRS 342 (631)
Q Consensus 267 KAgALN~~l----~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~~g~~vg~VQ~pq~f~n~~~~d~~~~~~~~ 342 (631)
||.++|.|+ +. ++||||+++|+|+++. |+.+. +... ..|..+.. ..+.+.
T Consensus 113 ~a~a~N~G~~~al~~----A~gd~i~flD~D~i~~-~d~~~----~~~~----------~~p~~~~~--~~~~~~----- 166 (287)
T 2fy7_A 113 RAKLLNVGFQEALKD----YDYTCFVFSDVDLIPM-NDHNA----YRCF----------SQPRHISV--AMDKFG----- 166 (287)
T ss_dssp HHHHHHHHHHHHHHH----SCCCEEEEECTTEEES-BTTSC----CSCC----------SSCEECCC--EEGGGT-----
T ss_pred hhhhhhhHHHHHHHh----CCCCEEEEECCCcccC-CCcce----EecC----------CCCceEEE--eecccc-----
Confidence 788899988 77 8999999999999997 88521 1111 01111100 001100
Q ss_pred HHHHHHHHhhhcCCcceeeeeeeeehhhhccccCcchhhhhhcCchHHHHhHhhhhhcccCCCCCcchhhHHhhcccccc
Q 006792 343 AYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASC 422 (631)
Q Consensus 343 f~~~~~~g~d~~~~~~~~Gsg~~~RR~AL~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~c 422 (631)
| ...+ ..+.|.+.++||+++..+
T Consensus 167 -~------~~~~--~~~~G~~~~~rr~~f~~v------------------------------------------------ 189 (287)
T 2fy7_A 167 -F------SLPY--VQYFGGVSALSKQQFLTI------------------------------------------------ 189 (287)
T ss_dssp -T------SCSS--TTCCCSEEEEEHHHHHHT------------------------------------------------
T ss_pred -c------CCCc--CceeeeEEEEEHHHHHHc------------------------------------------------
Confidence 0 0001 235677889999999876
Q ss_pred cccccccccccccccCCcc---cchHHHHHHHHhcCCeEEEeCCCCC----------eeEeecCCCHHHHhhhhhhhhhh
Q 006792 423 SYEHQTKWGEEVGILYQSV---SEDLFTGFILHCKGWTSTYLTPFRP----------QFLGTSTTNLNDLLIQGTRWGSG 489 (631)
Q Consensus 423 ~ye~~t~wg~e~G~~~~sl---tED~~t~~rl~~~Gwrs~y~~~~~~----------~~~g~aP~tl~~~~~Qr~RWa~G 489 (631)
|||+..-. .||.+++.|++.+||++.+.++... ......|..++.+.+||.||+++
T Consensus 190 -----------gGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~~~~l~~~~~~~~~~ 258 (287)
T 2fy7_A 190 -----------NGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLSD 258 (287)
T ss_dssp -----------TSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CCCCCCCHHHHHHHTTTS
T ss_pred -----------CCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCHHHHHHHhhcccEEcCC
Confidence 56665433 5999999999999998774332001 11345789999999999999999
Q ss_pred hhHHH
Q 006792 490 LTDVG 494 (631)
Q Consensus 490 ~~qi~ 494 (631)
++..+
T Consensus 259 Gl~~~ 263 (287)
T 2fy7_A 259 GLNSL 263 (287)
T ss_dssp SGGGC
T ss_pred CcccC
Confidence 98775
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.18 E-value=1.8e-10 Score=116.28 Aligned_cols=43 Identities=12% Similarity=-0.001 Sum_probs=38.3
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcC-----CCC
Q 006792 267 KAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD-----PKI 314 (631)
Q Consensus 267 KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~D-----p~~ 314 (631)
.|.|+|.|++. ++||||+++|+|++++ |++|.+++..+.+ |++
T Consensus 62 ~a~a~N~Gi~~----A~g~yl~fln~D~~~~-~~~l~~l~~~~~~~~~~~~~v 109 (249)
T 2nxv_A 62 GFSWHKQMLPR----CKGRYVIFCHEDVELV-DRGYDDLVAAIEALEEADPKW 109 (249)
T ss_dssp TTTHHHHHGGG----CCSSEEEEEETTEECS-SCCHHHHHHHHHHHHHHCTTE
T ss_pred HHHHHHHHHHh----cCCCEEEEECCCcccC-ccHHHHHHHHHHhcccCCCCe
Confidence 47789999999 8999999999999996 9999999998863 873
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=98.94 E-value=2.2e-08 Score=108.17 Aligned_cols=42 Identities=19% Similarity=0.044 Sum_probs=36.9
Q ss_pred CCChHHHHHHHH----HhcCCCCCCCEEEEeCCCCC-CCChHHHHHHHHhhc
Q 006792 264 HHFKAGALNVLL----RVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFHL 310 (631)
Q Consensus 264 ~~~KAgALN~~l----~~s~~~t~g~~Il~~DaD~~-~~~pd~L~~~v~~f~ 310 (631)
+.||++|+|.|+ +. ++||+|+++|||.. .+ |+.+.+++....
T Consensus 73 n~GkG~Al~~G~~~Al~~----a~gd~vv~mDADlq~~~-P~~i~~Ll~~l~ 119 (397)
T 2bo4_A 73 RPGKGDGMNTALRYFLEE----TQWERIHFYDADITSFG-PDWITKAEEAAD 119 (397)
T ss_dssp SSSHHHHHHHHHHHHHHH----CCCSEEEECCTTCSSCC-HHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHh----CCCCEEEEEcCCCCCCC-HHHHHHHHHHHH
Confidence 468999999999 77 89999999999996 55 999999888764
No 16
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=98.30 E-value=2e-06 Score=90.46 Aligned_cols=44 Identities=7% Similarity=-0.013 Sum_probs=36.6
Q ss_pred CCCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhch
Q 006792 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITL 145 (631)
Q Consensus 93 ~~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~ 145 (631)
.+..++|+||+|| |.. +++.+++++.|.. .+|+|+||||+|.|.
T Consensus 51 i~~klSIVVPvYN---Ee~----~lLesVl~qi~~d--~eIIlVdDGS~D~s~ 94 (391)
T 2wvl_A 51 VLEQTAIVVPTRN---ERL----KLLEGVLSGIPHE--ALILVASNSSPDRFQ 94 (391)
T ss_dssp HHTTEEEEEEESS---CCH----HHHHHHHHTSCTT--SEEEEEECCCHHHHH
T ss_pred HHhceEEEEeccC---cHH----HHHHHHHhcCCCC--ceEEEEECCCCCChH
Confidence 3578999999999 552 4689999998764 999999999999774
No 17
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=98.23 E-value=3.9e-06 Score=90.00 Aligned_cols=38 Identities=21% Similarity=0.169 Sum_probs=32.1
Q ss_pred CChHHHHHHHHHhcCCCC---CCCEEEEeCCCCCCCChHHHHHHHHh
Q 006792 265 HFKAGALNVLLRVSGVIS---NSPYILGLDCDMYCNDPTSARQAMCF 308 (631)
Q Consensus 265 ~~KAgALN~~l~~s~~~t---~g~~Il~~DaD~~~~~pd~L~~~v~~ 308 (631)
.||..|+-+|+.. + ++++|+++|||-+ .|..+.+.+.-
T Consensus 143 ~GKG~Am~aGl~~----A~~~~gd~Vv~~DaDl~--iP~~v~~~~kg 183 (394)
T 2zu9_A 143 SGKGEGMLVGLLL----AKAIGAEYVGFVDADNY--IPGAVNEYVKD 183 (394)
T ss_dssp CSHHHHHHHHHHH----HHHTTCSEEEECCSCBS--CHHHHHHHHHH
T ss_pred CChHHHHHHHHHH----HhhCCCCEEEEEeCCCC--CHHHHHHHHHH
Confidence 4899999999998 6 8999999999994 38888766553
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=97.99 E-value=1.8e-05 Score=83.70 Aligned_cols=47 Identities=17% Similarity=0.244 Sum_probs=40.6
Q ss_pred CCceEEEEeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhch
Q 006792 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITL 145 (631)
Q Consensus 94 ~P~VdV~Ipt~n~~~Ep~~~v~~Tv~s~l~~dYP~~kl~V~V~DDg~~~~T~ 145 (631)
++.+.|+|+||| -| + +.++|.|+++++.+.++.+|+|+|||+.+.|.
T Consensus 1 ~~~~pViI~~yN---Rp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~ 47 (343)
T 1fo8_A 1 LAVIPILVIACD---RS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETA 47 (343)
T ss_dssp CCCCCEEEEESS---CT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHH
T ss_pred CCcccEEEEECC---cH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHH
Confidence 456889999999 67 6 99999999999977778899999999987553
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=89.98 E-value=1.1 Score=45.67 Aligned_cols=32 Identities=22% Similarity=0.220 Sum_probs=26.9
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCC
Q 006792 265 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCND 298 (631)
Q Consensus 265 ~~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~ 298 (631)
.-||..||.|...+. .+.+++++-|.|.+|.|
T Consensus 97 FNRa~LlNvGf~ea~--~~~d~~ifHDVDLlP~d 128 (287)
T 3lw6_A 97 FNRASLINVGFQFAS--DVYDYIAMHDVDLLPLN 128 (287)
T ss_dssp CCHHHHHHHHHHHSC--TTCCEEEEECTTEEECC
T ss_pred cchhheecccHHHHh--ccCCEEEEecccccccC
Confidence 458999999998843 45799999999999985
No 20
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=74.95 E-value=6.3 Score=38.09 Aligned_cols=24 Identities=13% Similarity=0.048 Sum_probs=21.3
Q ss_pred CCCCEEEEeCCC---CCCCChHHHHHHH
Q 006792 282 SNSPYILGLDCD---MYCNDPTSARQAM 306 (631)
Q Consensus 282 t~g~~Il~~DaD---~~~~~pd~L~~~v 306 (631)
.++++++.+||| .--+ |+.+.+++
T Consensus 52 ~~~dhllfIDAD~~~I~Fd-Pe~V~rLl 78 (203)
T 2c0n_A 52 KDYDTLAFLDEDVVPIEID-FQKVEAKF 78 (203)
T ss_dssp TTCCEEEEECTTEEEEECC-HHHHHHHH
T ss_pred CCCCEEEEEeCCCCccccC-HHHHHHHH
Confidence 678999999999 8776 99998887
No 21
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=49.56 E-value=76 Score=31.24 Aligned_cols=46 Identities=13% Similarity=-0.012 Sum_probs=31.4
Q ss_pred ChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhc-CCC
Q 006792 266 FKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPK 313 (631)
Q Consensus 266 ~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~-Dp~ 313 (631)
|.++ +..+++..+ ..+.+.++++++|.-.-+++.+++++..+. +|+
T Consensus 82 Gt~~-i~~a~~~l~-~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~ 128 (256)
T 3tqd_A 82 GTER-IAEAAVALG-FEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDN 128 (256)
T ss_dssp HHHH-HHHHHHHTT-CCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC-
T ss_pred cHHH-HHHHHHHhC-cCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCC
Confidence 4554 566666621 125789999999993334899999998886 444
No 22
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=44.44 E-value=24 Score=35.57 Aligned_cols=30 Identities=23% Similarity=0.262 Sum_probs=25.6
Q ss_pred CCCCEEEEeCCCCCCCChHHHHHHHHhhcCCC
Q 006792 282 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (631)
Q Consensus 282 t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~ 313 (631)
.+.+.++..|.|++++ .+-|.+.+..+ ||.
T Consensus 92 ~~~~Wf~~~DDDtyv~-~~nL~~~L~~~-d~~ 121 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYVN-PKALLQLLKTF-PQD 121 (280)
T ss_dssp HTCSEEEEEETTEEEC-HHHHHHHHTTS-CTT
T ss_pred CCCcEEEEeCCCcEEc-HHHHHHHHHhC-CCC
Confidence 4789999999999997 99999888765 665
No 23
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=43.43 E-value=1.2e+02 Score=29.43 Aligned_cols=44 Identities=11% Similarity=0.025 Sum_probs=30.3
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCChHHHHHHHHhhcC
Q 006792 265 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 311 (631)
Q Consensus 265 ~~KAgALN~~l~~s~~~t~g~~Il~~DaD~-~~~~pd~L~~~v~~f~D 311 (631)
.|.+++ -.+++..+ ..+.+.++++++|+ .+. ++.+.+++..+.+
T Consensus 74 ~Gt~~~-~~~~~~l~-~~~~d~vlv~~gD~Pli~-~~~i~~l~~~~~~ 118 (252)
T 3oam_A 74 SGTERL-AEVVAKMA-IPADHIVVNVQGDEPLIP-PAIIRQVADNLAA 118 (252)
T ss_dssp SHHHHH-HHHHHHTT-CCTTSEEEECCTTCTTCC-HHHHHHHHHHHHH
T ss_pred CcHHHH-HHHHHhcC-cCCCCEEEEEeCCeeecC-HHHHHHHHHHHHh
Confidence 356663 44455421 12578999999999 555 8999999988864
No 24
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=39.58 E-value=60 Score=30.19 Aligned_cols=41 Identities=15% Similarity=0.087 Sum_probs=32.4
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCChHHHHHHHHhh
Q 006792 265 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFH 309 (631)
Q Consensus 265 ~~KAgALN~~l~~s~~~t~g~~Il~~DaD~-~~~~pd~L~~~v~~f 309 (631)
.|-++++..|++.. .+.+.+++++||+ .+. ++.+++++..+
T Consensus 71 ~G~~~si~~al~~~---~~~~~vlv~~~D~P~i~-~~~i~~l~~~~ 112 (197)
T 3d5n_A 71 EGISTSLKLGLRFF---KDYDAVLVALGDMPFVT-KEDVNKIINTF 112 (197)
T ss_dssp GCHHHHHHHHHHHT---TTSSEEEEEETTCCCSC-HHHHHHHHHTC
T ss_pred CCHHHHHHHHHHhh---ccCCcEEEEeCCccccC-HHHHHHHHHHh
Confidence 35688888999872 2348999999999 565 89999988866
No 25
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=27.53 E-value=1.1e+02 Score=28.38 Aligned_cols=40 Identities=10% Similarity=0.194 Sum_probs=32.2
Q ss_pred ChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCChHHHHHHHHhh
Q 006792 266 FKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFH 309 (631)
Q Consensus 266 ~KAgALN~~l~~s~~~t~g~~Il~~DaD~-~~~~pd~L~~~v~~f 309 (631)
+.++++..|++.. .+.+.+++++||+ .+. ++.+++++..+
T Consensus 78 ~~~~~i~~al~~~---~~~~~vlv~~~D~P~~~-~~~i~~l~~~~ 118 (223)
T 2xwl_A 78 DRTESVALALEAA---GDAEFVLVHDAARALTP-PALIARVVAAL 118 (223)
T ss_dssp SHHHHHHHHHTTC---TTCSEEEECCTTCTTCC-HHHHHHHHHHH
T ss_pred CHHHHHHHHHHhc---CCCCEEEEEcCCcccCC-HHHHHHHHHHH
Confidence 3688898998872 1678999999999 455 88999998877
No 26
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=23.47 E-value=90 Score=29.12 Aligned_cols=39 Identities=15% Similarity=0.179 Sum_probs=32.6
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCChHHHHHHHHh
Q 006792 265 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCF 308 (631)
Q Consensus 265 ~~KAgALN~~l~~s~~~t~g~~Il~~DaD~-~~~~pd~L~~~v~~ 308 (631)
.+-++++..|++. .+.+.+++++||+ .+. ++.+++++..
T Consensus 77 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~-~~~i~~l~~~ 116 (201)
T 1e5k_A 77 PGPLAGMLSVMQQ----EAGEWFLFCPCDTPYIP-PDLAARLNHQ 116 (201)
T ss_dssp CSHHHHHHHHHHH----CCSSEEEEEETTCTTCC-TTHHHHHHHT
T ss_pred CCHHHHHHHHHHh----CCCCcEEEEeCCcCcCC-HHHHHHHHhh
Confidence 4688999999988 5679999999999 565 8888888765
No 27
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=22.75 E-value=95 Score=29.15 Aligned_cols=41 Identities=10% Similarity=0.028 Sum_probs=31.9
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCChHHHHHHHHhhcC
Q 006792 265 HFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 311 (631)
Q Consensus 265 ~~KAgALN~~l~~s~~~t~g~~Il~~DaD~-~~~~pd~L~~~v~~f~D 311 (631)
.+.+++++ +++. .+.+.+++++||+ ..+ ++.+++++..+.+
T Consensus 72 ~g~~~~~~-~~~~----~~~~~vlv~~~D~P~~~-~~~i~~l~~~~~~ 113 (234)
T 2y6p_A 72 SGSDRVLY-VVRD----LDVDLIINYQGDEPFVY-EEDIKLIFRELEK 113 (234)
T ss_dssp SHHHHHHH-HHTT----CCCSEEEECCTTCCCCC-HHHHHHHHHHHHH
T ss_pred cchHHHHH-HHHh----CCCCEEEEecCCcCcCC-HHHHHHHHHHHHh
Confidence 46777774 5555 4678999999999 775 8999999887753
No 28
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=20.54 E-value=1.9e+02 Score=28.46 Aligned_cols=46 Identities=15% Similarity=0.036 Sum_probs=32.2
Q ss_pred ChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHhhcCCC
Q 006792 266 FKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 313 (631)
Q Consensus 266 ~KAgALN~~l~~s~~~t~g~~Il~~DaD~~~~~pd~L~~~v~~f~Dp~ 313 (631)
|.++ +..+++... ..+.+.++++++|+-.-+++.+++++..+.+++
T Consensus 91 Gt~~-i~~~~~~l~-~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~ 136 (264)
T 3k8d_A 91 GTER-LAEVVEKCA-FSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQ 136 (264)
T ss_dssp HHHH-HHHHHHHHT-CCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSS
T ss_pred CHHH-HHHHHHHhc-cCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcC
Confidence 4544 556665522 136799999999994334899999999887654
Done!