Query 006793
Match_columns 631
No_of_seqs 442 out of 3747
Neff 8.3
Searched_HMMs 13730
Date Mon Mar 25 09:07:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006793.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/006793hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 99.8 8E-21 5.8E-25 194.5 5.4 155 374-535 3-164 (313)
2 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.5 6.7E-15 4.9E-19 139.0 8.3 133 402-535 2-141 (192)
3 d1ogqa_ c.10.2.8 (A:) Polygala 99.5 7E-16 5.1E-20 157.2 -0.8 186 335-543 126-313 (313)
4 d1p9ag_ c.10.2.7 (G:) von Will 99.4 9.7E-14 7.1E-18 137.8 6.3 198 305-535 10-210 (266)
5 d1p9ag_ c.10.2.7 (G:) von Will 99.3 1.7E-12 1.2E-16 128.7 7.1 105 425-533 32-137 (266)
6 d1dcea3 c.10.2.2 (A:444-567) R 99.2 6.3E-12 4.6E-16 109.5 8.5 98 428-532 2-102 (124)
7 d1ozna_ c.10.2.7 (A:) Reticulo 99.1 3.6E-11 2.6E-15 119.9 6.8 111 424-535 129-240 (284)
8 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.1 4.2E-11 3E-15 112.4 6.2 90 423-512 53-143 (192)
9 d2ifga3 c.10.2.7 (A:36-191) Hi 99.0 1.2E-10 8.6E-15 105.5 7.2 102 429-534 13-117 (156)
10 d1a9na_ c.10.2.4 (A:) Spliceso 99.0 8.8E-11 6.4E-15 107.1 5.2 102 425-532 19-124 (162)
11 d1xkua_ c.10.2.7 (A:) Decorin 99.0 5.1E-10 3.7E-14 112.4 10.3 127 401-531 3-135 (305)
12 d1dcea3 c.10.2.2 (A:444-567) R 99.0 2.9E-10 2.1E-14 98.7 6.6 100 422-525 18-122 (124)
13 d1ozna_ c.10.2.7 (A:) Reticulo 98.9 3.6E-10 2.6E-14 112.5 6.3 201 308-535 14-216 (284)
14 d2ifga3 c.10.2.7 (A:36-191) Hi 98.9 1.1E-09 8.2E-14 98.9 7.8 99 409-508 9-116 (156)
15 d1xkua_ c.10.2.7 (A:) Decorin 98.9 1.3E-09 9.8E-14 109.2 7.8 109 424-534 171-286 (305)
16 d1xwdc1 c.10.2.7 (C:18-259) Fo 98.8 5.8E-10 4.2E-14 107.9 4.2 103 408-510 8-118 (242)
17 d2omxa2 c.10.2.1 (A:37-235) In 98.8 3.1E-09 2.3E-13 99.8 6.5 100 424-532 40-140 (199)
18 d1h6ta2 c.10.2.1 (A:31-240) In 98.7 5.9E-09 4.3E-13 98.8 6.6 99 425-532 47-146 (210)
19 d1a9na_ c.10.2.4 (A:) Spliceso 98.7 8.1E-09 5.9E-13 93.7 6.3 88 443-534 13-101 (162)
20 d1m9la_ c.10.3.1 (A:) Outer ar 98.6 4.3E-10 3.1E-14 106.0 -4.3 104 423-533 47-153 (198)
21 d2omza2 c.10.2.1 (A:33-416) In 98.4 1.2E-07 8.9E-12 97.1 6.6 96 426-530 287-383 (384)
22 d2omxa2 c.10.2.1 (A:37-235) In 98.4 2.6E-07 1.9E-11 86.2 7.4 101 423-532 61-162 (199)
23 d1h6ta2 c.10.2.1 (A:31-240) In 98.2 6E-07 4.4E-11 84.5 6.9 99 425-532 91-190 (210)
24 d1h6ua2 c.10.2.1 (A:36-262) In 98.2 4.7E-07 3.4E-11 86.2 6.2 99 424-531 41-140 (227)
25 d1m9la_ c.10.3.1 (A:) Outer ar 98.2 7.3E-08 5.3E-12 90.2 -0.5 89 439-533 39-128 (198)
26 d2omza2 c.10.2.1 (A:33-416) In 98.2 5.2E-07 3.8E-11 92.2 4.9 76 424-505 307-383 (384)
27 d1h6ua2 c.10.2.1 (A:36-262) In 98.1 1.4E-06 1E-10 82.8 6.6 94 426-528 131-225 (227)
28 d1jl5a_ c.10.2.6 (A:) Leucine 98.0 4.2E-06 3E-10 83.9 9.2 93 426-532 40-132 (353)
29 d1xwdc1 c.10.2.7 (C:18-259) Fo 97.7 1.4E-05 1E-09 76.0 5.7 102 427-533 11-116 (242)
30 d1z7xw1 c.10.1.1 (W:1-460) Rib 97.5 6.3E-06 4.6E-10 85.5 0.3 106 425-531 3-123 (460)
31 d1koha1 c.10.2.3 (A:201-362) m 97.5 6.7E-06 4.9E-10 73.7 0.0 86 439-526 56-152 (162)
32 d1koha1 c.10.2.3 (A:201-362) m 97.4 1.7E-05 1.3E-09 71.0 1.0 88 444-534 38-129 (162)
33 d1jl5a_ c.10.2.6 (A:) Leucine 97.3 0.00013 9.7E-09 72.4 7.4 76 425-509 59-134 (353)
34 d1z7xw1 c.10.1.1 (W:1-460) Rib 97.2 1.2E-05 9E-10 83.2 -2.1 109 425-533 313-439 (460)
35 d2ca6a1 c.10.1.2 (A:2-345) Rna 97.1 3.2E-05 2.3E-09 77.8 -0.5 109 425-533 187-315 (344)
36 d2astb2 c.10.1.3 (B:2136-2419) 97.0 2.6E-05 1.9E-09 76.5 -2.3 105 425-529 47-157 (284)
37 d2ca6a1 c.10.1.2 (A:2-345) Rna 96.9 5.5E-05 4E-09 76.0 -0.6 107 425-531 159-284 (344)
38 d2o14a1 b.18.1.32 (A:14-159) H 96.7 0.0076 5.6E-07 51.9 11.9 80 89-184 64-144 (146)
39 d2astb2 c.10.1.3 (B:2136-2419) 96.7 0.00015 1.1E-08 70.9 0.3 87 445-531 43-132 (284)
40 d1pgva_ c.10.1.1 (A:) Tropomod 96.1 0.00059 4.3E-08 60.8 0.6 84 425-508 16-113 (167)
41 d1pgva_ c.10.1.1 (A:) Tropomod 93.7 0.005 3.7E-07 54.4 -0.4 87 445-531 12-111 (167)
42 d1io0a_ c.10.1.1 (A:) Tropomod 92.3 0.0068 4.9E-07 53.4 -1.7 106 425-531 18-143 (166)
43 d1io0a_ c.10.1.1 (A:) Tropomod 83.0 0.047 3.4E-06 47.6 -2.6 84 425-508 47-145 (166)
44 d2o14a1 b.18.1.32 (A:14-159) H 79.4 1.7 0.00013 36.4 6.5 77 274-368 64-143 (146)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.80 E-value=8e-21 Score=194.52 Aligned_cols=155 Identities=24% Similarity=0.418 Sum_probs=134.5
Q ss_pred CchhHHHHHHHHHHhcCCCC-CCCCC--CCCCCCCCCCCCcceeecCCCCCceeEEEEEEecCCCCcc--cCchhhcccc
Q 006793 374 TVPEQVIAMRALKESLRVPD-RMGWN--GDPCAPTNWDAWEGITCHPNKDETAVVISQIDLGSQGLKG--YISDKISLLS 448 (631)
Q Consensus 374 ~~p~~~~~l~~l~~~~~~~~-~~~w~--gdpc~~~~~~~w~gv~c~~~~~~~~~~l~~L~Ls~n~l~g--~~p~~~~~l~ 448 (631)
++|+|..||.++|+.+..+. ..+|. +|+|. +.|.||.|+... ...+++.|+|++|.++| .+|+++++|+
T Consensus 3 c~~~e~~aLl~~k~~~~~~~~l~sW~~~~d~C~----~~w~gv~C~~~~--~~~~v~~L~L~~~~l~g~~~lp~~l~~L~ 76 (313)
T d1ogqa_ 3 CNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCN----RTWLGVLCDTDT--QTYRVNNLDLSGLNLPKPYPIPSSLANLP 76 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTT----TCSTTEEECCSS--SCCCEEEEEEECCCCSSCEECCGGGGGCT
T ss_pred CCHHHHHHHHHHHHHCCCCCcCCCCCCCCCCCC----CcCCCeEEeCCC--CcEEEEEEECCCCCCCCCCCCChHHhcCc
Confidence 57999999999999887654 34784 47774 479999998643 23479999999999998 5899999999
Q ss_pred ccccccccc-ccCCCCCCCcccc-ccccccccccccCCCCCCccCCCCCCCCEEEcccCcCccccchhhhhccCCCCeEe
Q 006793 449 NLVNLNLST-NSLGGTLPSGLGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVLLNNNLLEGRVPEELYSIGVHGGAFD 526 (631)
Q Consensus 449 ~L~~L~Ls~-N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP~~l~~~~~~L~~l~ 526 (631)
+|++|+|++ |+++|.+|+.+++ ++|++|+|++|++.|..|..+..+.+|+.+++++|++.+.+|..+..+. .++.++
T Consensus 77 ~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~-~L~~l~ 155 (313)
T d1ogqa_ 77 YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLP-NLVGIT 155 (313)
T ss_dssp TCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCT-TCCEEE
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCc-ccceee
Confidence 999999997 8999999999999 9999999999999998888899999999999999999999999988876 788999
Q ss_pred ecCCCCCCC
Q 006793 527 LSGNKGLCG 535 (631)
Q Consensus 527 l~~N~~lc~ 535 (631)
+++|.+...
T Consensus 156 l~~n~l~~~ 164 (313)
T d1ogqa_ 156 FDGNRISGA 164 (313)
T ss_dssp CCSSCCEEE
T ss_pred ccccccccc
Confidence 999986543
No 2
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.52 E-value=6.7e-15 Score=139.02 Aligned_cols=133 Identities=17% Similarity=0.215 Sum_probs=108.8
Q ss_pred CCCCCCCCCcceeecCCCCCce-----eEEEEEEecCCCCcccC-chhhcccccccccccccccCCCCCCCcccc-cccc
Q 006793 402 CAPTNWDAWEGITCHPNKDETA-----VVISQIDLGSQGLKGYI-SDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLV 474 (631)
Q Consensus 402 c~~~~~~~w~gv~c~~~~~~~~-----~~l~~L~Ls~n~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~ 474 (631)
|...+.|.|..|.|+......+ ..++.|+|++|.|++.+ +..|.++++|+.|+|++|++.+..+..+.. ++|+
T Consensus 2 CP~~C~C~~~~v~Cs~~~L~~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~ 81 (192)
T d1w8aa_ 2 CPAMCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQ 81 (192)
T ss_dssp CCTTSEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCC
T ss_pred cCCCCEEcCCEEEEeCCCcCccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccc
Confidence 4444447888999975542222 35889999999998755 557899999999999999999777777887 9999
Q ss_pred ccccccccCCCCCCccCCCCCCCCEEEcccCcCccccchhhhhccCCCCeEeecCCCCCCC
Q 006793 475 RLDLSDNQFTGSIPDSLTSSSKLQLVLLNNNLLEGRVPEELYSIGVHGGAFDLSGNKGLCG 535 (631)
Q Consensus 475 ~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP~~l~~~~~~L~~l~l~~N~~lc~ 535 (631)
.|+|++|++++..|..|.++++|++|+|++|+|++ +|+..+....+|+.+++++|++.|.
T Consensus 82 ~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~-i~~~~f~~l~~L~~l~L~~N~~~~~ 141 (192)
T d1w8aa_ 82 ELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISC-VMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp EEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCE-ECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred eeeeccccccccCHHHHhCCCcccccccCCccccc-cCHHHhcCCcccccccccccccccc
Confidence 99999999997667789999999999999999995 5554444445899999999998874
No 3
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.49 E-value=7e-16 Score=157.19 Aligned_cols=186 Identities=25% Similarity=0.341 Sum_probs=130.7
Q ss_pred eeeEeecCCceEEEEEcccchhhhhhccccccccCCC-CCCchhHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCcce
Q 006793 335 HYVAKNLSSTELTVKLVPVVGAALISGLENYALVPND-LSTVPEQVIAMRALKESLRVPDRMGWNGDPCAPTNWDAWEGI 413 (631)
Q Consensus 335 ~~~~l~ls~n~L~~~l~~~~~~~~Ln~lEi~~l~~~~-~~~~p~~~~~l~~l~~~~~~~~~~~w~gdpc~~~~~~~w~gv 413 (631)
.+..++++.|.+...++...+. +..++.+.+..+. .+.+|..+..+..+...+.. .. ....|.
T Consensus 126 ~L~~l~l~~N~~~~~~p~~l~~--l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~----~~----------n~l~~~ 189 (313)
T d1ogqa_ 126 TLVTLDFSYNALSGTLPPSISS--LPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTI----SR----------NRLTGK 189 (313)
T ss_dssp TCCEEECCSSEEESCCCGGGGG--CTTCCEEECCSSCCEEECCGGGGCCCTTCCEEEC----CS----------SEEEEE
T ss_pred hhcccccccccccccCchhhcc--Ccccceeecccccccccccccccccccccccccc----cc----------cccccc
Confidence 3556666777776666655554 5555655555554 33555544333222111100 00 011111
Q ss_pred eecCCCCCceeEEEEEEecCCCCcccCchhhcccccccccccccccCCCCCCCcccc-ccccccccccccCCCCCCccCC
Q 006793 414 TCHPNKDETAVVISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDNQFTGSIPDSLT 492 (631)
Q Consensus 414 ~c~~~~~~~~~~l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~iP~~l~ 492 (631)
.- .....+ ....++++.+.+.|.+|..+..+++|+.|++++|.++|.+| .++. ++|+.|+|++|+|+|.+|++|+
T Consensus 190 ~~--~~~~~l-~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~ 265 (313)
T d1ogqa_ 190 IP--PTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLT 265 (313)
T ss_dssp CC--GGGGGC-CCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGG
T ss_pred cc--cccccc-ccccccccccccccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHh
Confidence 10 001111 23468999999999999999999999999999999998766 5677 9999999999999999999999
Q ss_pred CCCCCCEEEcccCcCccccchhhhhccCCCCeEeecCCCCCCCCCCCCCCC
Q 006793 493 SSSKLQLVLLNNNLLEGRVPEELYSIGVHGGAFDLSGNKGLCGAPSLPSCP 543 (631)
Q Consensus 493 ~l~~L~~L~ls~N~l~g~iP~~l~~~~~~L~~l~l~~N~~lc~~p~~~~c~ 543 (631)
++++|++|+|++|+|+|.+|. +..+. +|+.+++++|+.+|+.| +++|.
T Consensus 266 ~L~~L~~L~Ls~N~l~g~iP~-~~~L~-~L~~l~l~~N~~l~g~p-lp~c~ 313 (313)
T d1ogqa_ 266 QLKFLHSLNVSFNNLCGEIPQ-GGNLQ-RFDVSAYANNKCLCGSP-LPACT 313 (313)
T ss_dssp GCTTCCEEECCSSEEEEECCC-STTGG-GSCGGGTCSSSEEESTT-SSCCC
T ss_pred CCCCCCEEECcCCcccccCCC-cccCC-CCCHHHhCCCccccCCC-CCCCC
Confidence 999999999999999999995 34443 78899999999999976 45784
No 4
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=9.7e-14 Score=137.84 Aligned_cols=198 Identities=21% Similarity=0.240 Sum_probs=139.9
Q ss_pred ceEEEEEECCeeccccceeccCCCccceeeeeeEeecCCceEEEEEccc-chhhhhhccccccccCCCCCCchhHHHHHH
Q 006793 305 QRVFDILVNDKNVTRVDIFNSVGSFAAYSWHYVAKNLSSTELTVKLVPV-VGAALISGLENYALVPNDLSTVPEQVIAMR 383 (631)
Q Consensus 305 ~R~F~V~in~~~l~~~di~~~~g~~~~~~~~~~~l~ls~n~L~~~l~~~-~~~~~Ln~lEi~~l~~~~~~~~p~~~~~l~ 383 (631)
.+.+.|..+++.++.++- .+ ...++.+++++|.++ .+++. ... +..++.+.+..|....+|.. ..+.
T Consensus 10 ~~~~~v~C~~~~L~~iP~-----~l---p~~l~~L~Ls~N~i~-~l~~~~f~~--l~~L~~L~L~~N~l~~l~~~-~~l~ 77 (266)
T d1p9ag_ 10 ASHLEVNCDKRNLTALPP-----DL---PKDTTILHLSENLLY-TFSLATLMP--YTRLTQLNLDRAELTKLQVD-GTLP 77 (266)
T ss_dssp TTCCEEECTTSCCSSCCS-----CC---CTTCCEEECTTSCCS-EEEGGGGTT--CTTCCEEECTTSCCCEEECC-SCCT
T ss_pred CCCeEEEccCCCCCeeCc-----Cc---CcCCCEEECcCCcCC-CcCHHHhhc--cccccccccccccccccccc-cccc
Confidence 344567777766655431 11 124667888888887 34433 332 56677777777776666542 2233
Q ss_pred HHHHhcCCCCCCCCCCCCCCCCCCCCCcceeecCCCCCceeEEEEEEecCCCCcccCchhhcccccccccccccccCCCC
Q 006793 384 ALKESLRVPDRMGWNGDPCAPTNWDAWEGITCHPNKDETAVVISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGT 463 (631)
Q Consensus 384 ~l~~~~~~~~~~~w~gdpc~~~~~~~w~gv~c~~~~~~~~~~l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 463 (631)
.|+...- +.+ ...+ .+.....+..|+.|++++|.+.+..+..+..+.+++.|++++|.++ .
T Consensus 78 ~L~~L~L-----s~N----------~l~~---~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~-~ 138 (266)
T d1p9ag_ 78 VLGTLDL-----SHN----------QLQS---LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-T 138 (266)
T ss_dssp TCCEEEC-----CSS----------CCSS---CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC-C
T ss_pred ccccccc-----ccc----------cccc---cccccccccccccccccccccceeeccccccccccccccccccccc-e
Confidence 3322111 101 0000 0111223456889999999999888888999999999999999999 5
Q ss_pred CCCc-ccc-ccccccccccccCCCCCCccCCCCCCCCEEEcccCcCccccchhhhhccCCCCeEeecCCCCCCC
Q 006793 464 LPSG-LGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVLLNNNLLEGRVPEELYSIGVHGGAFDLSGNKGLCG 535 (631)
Q Consensus 464 iP~~-~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP~~l~~~~~~L~~l~l~~N~~lc~ 535 (631)
+|+. +.. ++|+.|++++|++++..|..|..+++|++|+|++|+|+ .+|..++.+. +|+.|++++||+.|.
T Consensus 139 l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~-~L~~L~L~~Np~~Cd 210 (266)
T d1p9ag_ 139 LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSH-LLPFAFLHGNPWLCN 210 (266)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTC-CCSEEECCSCCBCCS
T ss_pred eccccccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCC-CCCEEEecCCCCCCC
Confidence 5555 445 89999999999999877778999999999999999999 9999988875 799999999999993
No 5
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.27 E-value=1.7e-12 Score=128.70 Aligned_cols=105 Identities=24% Similarity=0.197 Sum_probs=88.9
Q ss_pred EEEEEEecCCCCcccCchhhcccccccccccccccCCCCCCCcccc-ccccccccccccCCCCCCccCCCCCCCCEEEcc
Q 006793 425 VISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVLLN 503 (631)
Q Consensus 425 ~l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls 503 (631)
.++.|+|++|.|++..+..|.++++|+.|+|++|+|+ .+|.. +. ++|+.|+|++|+++ .+|..+.++++|+.|+++
T Consensus 32 ~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~~~-~~l~~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~l~ 108 (266)
T d1p9ag_ 32 DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVS 108 (266)
T ss_dssp TCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECC
T ss_pred CCCEEECcCCcCCCcCHHHhhcccccccccccccccc-ccccc-ccccccccccccccccc-cccccccccccccccccc
Confidence 5889999999999776778999999999999999998 67753 55 89999999999999 478889999999999999
Q ss_pred cCcCccccchhhhhccCCCCeEeecCCCCC
Q 006793 504 NNLLEGRVPEELYSIGVHGGAFDLSGNKGL 533 (631)
Q Consensus 504 ~N~l~g~iP~~l~~~~~~L~~l~l~~N~~l 533 (631)
+|.+.+ ++...+....++..+++++|.+.
T Consensus 109 ~~~~~~-~~~~~~~~l~~l~~L~l~~n~l~ 137 (266)
T d1p9ag_ 109 FNRLTS-LPLGALRGLGELQELYLKGNELK 137 (266)
T ss_dssp SSCCCC-CCSSTTTTCTTCCEEECTTSCCC
T ss_pred ccccce-eeccccccccccccccccccccc
Confidence 999984 44444444458899999999854
No 6
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.24 E-value=6.3e-12 Score=109.48 Aligned_cols=98 Identities=29% Similarity=0.385 Sum_probs=84.7
Q ss_pred EEEecCCCCcccCchhhcccccccccccccccCCCCCCCcccc-ccccccccccccCCCCCCccCCCCCCCCEEEcccCc
Q 006793 428 QIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVLLNNNL 506 (631)
Q Consensus 428 ~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~ 506 (631)
.|+|++|+++ .++ .++.+++|++|++++|+++ .+|+.++. ++|+.|++++|+++ .+| .++.+++|+.|++++|+
T Consensus 2 ~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 2 VLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNNR 76 (124)
T ss_dssp EEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSSC
T ss_pred EEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCCc
Confidence 6899999998 555 4899999999999999999 89988888 99999999999999 566 58999999999999999
Q ss_pred Cccccc--hhhhhccCCCCeEeecCCCC
Q 006793 507 LEGRVP--EELYSIGVHGGAFDLSGNKG 532 (631)
Q Consensus 507 l~g~iP--~~l~~~~~~L~~l~l~~N~~ 532 (631)
++ .+| ..+..+ ++|+.+++++|++
T Consensus 77 i~-~~~~~~~l~~~-~~L~~L~l~~N~i 102 (124)
T d1dcea3 77 LQ-QSAAIQPLVSC-PRLVLLNLQGNSL 102 (124)
T ss_dssp CC-SSSTTGGGGGC-TTCCEEECTTSGG
T ss_pred cC-CCCCchhhcCC-CCCCEEECCCCcC
Confidence 98 344 345554 4899999999994
No 7
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.09 E-value=3.6e-11 Score=119.92 Aligned_cols=111 Identities=23% Similarity=0.255 Sum_probs=97.0
Q ss_pred eEEEEEEecCCCCcccCchhhcccccccccccccccCCCCCCCcccc-ccccccccccccCCCCCCccCCCCCCCCEEEc
Q 006793 424 VVISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVLL 502 (631)
Q Consensus 424 ~~l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 502 (631)
..|+.+++++|.|++..+..|..+++|+.|+|++|++++..|..+.. ++|+.+++++|++++..|..|.++++|++|++
T Consensus 129 ~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l 208 (284)
T d1ozna_ 129 AALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYL 208 (284)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhcccccc
Confidence 35788999999999777778999999999999999999655666677 99999999999999988999999999999999
Q ss_pred ccCcCccccchhhhhccCCCCeEeecCCCCCCC
Q 006793 503 NNNLLEGRVPEELYSIGVHGGAFDLSGNKGLCG 535 (631)
Q Consensus 503 s~N~l~g~iP~~l~~~~~~L~~l~l~~N~~lc~ 535 (631)
++|++++..|..+..+ .+|+.+++++|++.|.
T Consensus 209 ~~N~i~~~~~~~~~~~-~~L~~L~l~~N~l~C~ 240 (284)
T d1ozna_ 209 FANNLSALPTEALAPL-RALQYLRLNDNPWVCD 240 (284)
T ss_dssp CSSCCSCCCHHHHTTC-TTCCEEECCSSCEECS
T ss_pred cccccccccccccccc-cccCEEEecCCCCCCC
Confidence 9999996666666555 4899999999999883
No 8
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.08 E-value=4.2e-11 Score=112.37 Aligned_cols=90 Identities=20% Similarity=0.234 Sum_probs=79.9
Q ss_pred eeEEEEEEecCCCCcccCchhhcccccccccccccccCCCCCCCcccc-ccccccccccccCCCCCCccCCCCCCCCEEE
Q 006793 423 AVVISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVL 501 (631)
Q Consensus 423 ~~~l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 501 (631)
+.+|+.|+|++|.+.+..+..+..+++|+.|+|++|+|++..|..+.. ++|+.|+|++|+|++..|..|..+++|++|+
T Consensus 53 l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~ 132 (192)
T d1w8aa_ 53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLN 132 (192)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEE
T ss_pred CceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCccccccc
Confidence 345899999999999999999999999999999999999545556777 9999999999999977777899999999999
Q ss_pred cccCcCccccc
Q 006793 502 LNNNLLEGRVP 512 (631)
Q Consensus 502 ls~N~l~g~iP 512 (631)
|++|.+.+..+
T Consensus 133 L~~N~~~~~~~ 143 (192)
T d1w8aa_ 133 LASNPFNCNCH 143 (192)
T ss_dssp CTTCCBCCSGG
T ss_pred ccccccccccc
Confidence 99999986544
No 9
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.04 E-value=1.2e-10 Score=105.51 Aligned_cols=102 Identities=21% Similarity=0.173 Sum_probs=81.2
Q ss_pred EEecCCCCcccCchhhcccccccccccccc-cCCCCCCC-cccc-ccccccccccccCCCCCCccCCCCCCCCEEEcccC
Q 006793 429 IDLGSQGLKGYISDKISLLSNLVNLNLSTN-SLGGTLPS-GLGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVLLNNN 505 (631)
Q Consensus 429 L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N-~l~g~iP~-~~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N 505 (631)
++++++++. .+|..+..+++|+.|++++| .++ .++. .+.. ++|+.|+|++|+|+..-|..|..+++|++|+|++|
T Consensus 13 l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N 90 (156)
T d2ifga3 13 LRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQ-HLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (156)
T ss_dssp EECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCC-EECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEecCCCCc-cCcccccCccccCeeecCCCcccc-ccCchhhccccccCcceeeccccCCcccccccccccccceeccCC
Confidence 344445554 56777888899999999766 487 5654 4666 89999999999999666777899999999999999
Q ss_pred cCccccchhhhhccCCCCeEeecCCCCCC
Q 006793 506 LLEGRVPEELYSIGVHGGAFDLSGNKGLC 534 (631)
Q Consensus 506 ~l~g~iP~~l~~~~~~L~~l~l~~N~~lc 534 (631)
+|+ .+|...+... .++.|++++|++.|
T Consensus 91 ~l~-~l~~~~~~~~-~l~~L~L~~Np~~C 117 (156)
T d2ifga3 91 ALE-SLSWKTVQGL-SLQELVLSGNPLHC 117 (156)
T ss_dssp CCS-CCCSTTTCSC-CCCEEECCSSCCCC
T ss_pred CCc-ccChhhhccc-cccccccCCCcccC
Confidence 998 7887777665 68899999999988
No 10
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.01 E-value=8.8e-11 Score=107.06 Aligned_cols=102 Identities=20% Similarity=0.208 Sum_probs=84.6
Q ss_pred EEEEEEecCCCCcccCchhhcccccccccccccccCCCCCCCcccc-ccccccccccccCCCCCCcc-CCCCCCCCEEEc
Q 006793 425 VISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDNQFTGSIPDS-LTSSSKLQLVLL 502 (631)
Q Consensus 425 ~l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~iP~~-l~~l~~L~~L~l 502 (631)
.++.|+|++|+|+ .++..+..+++|+.|+|++|.++ .++ .+.. ++|+.|++++|+++. +|+. +..+++|+.|++
T Consensus 19 ~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~-l~~~~~~~l~~L~~L~L 94 (162)
T d1a9na_ 19 RDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICR-IGEGLDQALPDLTELIL 94 (162)
T ss_dssp SCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCE-ECSCHHHHCTTCCEEEC
T ss_pred cCcEEECCCCCCC-ccCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccC-CCcccccccccccccee
Confidence 4789999999998 56776788999999999999999 775 4677 999999999999994 5554 567999999999
Q ss_pred ccCcCccccch--hhhhccCCCCeEeecCCCC
Q 006793 503 NNNLLEGRVPE--ELYSIGVHGGAFDLSGNKG 532 (631)
Q Consensus 503 s~N~l~g~iP~--~l~~~~~~L~~l~l~~N~~ 532 (631)
++|+++ .++. .+..+ ++|+.+++++|+.
T Consensus 95 ~~N~i~-~~~~l~~l~~l-~~L~~L~l~~N~i 124 (162)
T d1a9na_ 95 TNNSLV-ELGDLDPLASL-KSLTYLCILRNPV 124 (162)
T ss_dssp CSCCCC-CGGGGGGGGGC-TTCCEEECCSSGG
T ss_pred cccccc-ccccccccccc-cccchhhcCCCcc
Confidence 999998 4443 34444 4899999999984
No 11
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.99 E-value=5.1e-10 Score=112.40 Aligned_cols=127 Identities=20% Similarity=0.231 Sum_probs=93.2
Q ss_pred CCCCCCCCCCcceeecCCCCCc-----eeEEEEEEecCCCCcccCchhhcccccccccccccccCCCCCCCcccc-cccc
Q 006793 401 PCAPTNWDAWEGITCHPNKDET-----AVVISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLV 474 (631)
Q Consensus 401 pc~~~~~~~w~gv~c~~~~~~~-----~~~l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~ 474 (631)
-|...+.|.|.++.|....... ...++.|+|++|+|+...+..|.++++|+.|++++|.+....|..+.. ++|+
T Consensus 3 ~~p~~c~c~~~~~~C~~~~L~~lP~~l~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~ 82 (305)
T d1xkua_ 3 VCPFRCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 82 (305)
T ss_dssp CCCTTCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCC
T ss_pred CCCCCCEecCCEEEecCCCCCccCCCCCCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccC
Confidence 3544445889999997643222 245889999999999655568999999999999999999666777888 9999
Q ss_pred ccccccccCCCCCCccCCCCCCCCEEEcccCcCccccchhhhhccCCCCeEeecCCC
Q 006793 475 RLDLSDNQFTGSIPDSLTSSSKLQLVLLNNNLLEGRVPEELYSIGVHGGAFDLSGNK 531 (631)
Q Consensus 475 ~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP~~l~~~~~~L~~l~l~~N~ 531 (631)
.|++++|+++ .+|..+. ..|+.|++++|.+.+ ++...+.....+..++...|+
T Consensus 83 ~L~l~~n~l~-~l~~~~~--~~l~~L~~~~n~l~~-l~~~~~~~~~~~~~l~~~~n~ 135 (305)
T d1xkua_ 83 RLYLSKNQLK-ELPEKMP--KTLQELRVHENEITK-VRKSVFNGLNQMIVVELGTNP 135 (305)
T ss_dssp EEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCB-BCHHHHTTCTTCCEEECCSSC
T ss_pred EecccCCccC-cCccchh--hhhhhhhccccchhh-hhhhhhhcccccccccccccc
Confidence 9999999999 6887543 578889998888884 443333333233444444443
No 12
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.97 E-value=2.9e-10 Score=98.68 Aligned_cols=100 Identities=22% Similarity=0.304 Sum_probs=82.1
Q ss_pred ceeEEEEEEecCCCCcccCchhhcccccccccccccccCCCCCCCcccc-ccccccccccccCCCCCC--ccCCCCCCCC
Q 006793 422 TAVVISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDNQFTGSIP--DSLTSSSKLQ 498 (631)
Q Consensus 422 ~~~~l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~iP--~~l~~l~~L~ 498 (631)
.+..|+.|+|++|.|+ .+|+.++.+++|+.|++++|.++ .+|. +.. ++|+.|++++|+++. +| ..+..+++|+
T Consensus 18 ~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~~-~~~l~~L~~L~l~~N~i~~-~~~~~~l~~~~~L~ 93 (124)
T d1dcea3 18 QLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVDG-VANLPRLQELLLCNNRLQQ-SAAIQPLVSCPRLV 93 (124)
T ss_dssp GGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCGG-GTTCSSCCEEECCSSCCCS-SSTTGGGGGCTTCC
T ss_pred cCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccCc-cccccccCeEECCCCccCC-CCCchhhcCCCCCC
Confidence 3456899999999998 67889999999999999999999 6764 777 999999999999984 44 4688899999
Q ss_pred EEEcccCcCccc--cchhhhhccCCCCeE
Q 006793 499 LVLLNNNLLEGR--VPEELYSIGVHGGAF 525 (631)
Q Consensus 499 ~L~ls~N~l~g~--iP~~l~~~~~~L~~l 525 (631)
.|++++|+++.. ++..+....++++.+
T Consensus 94 ~L~l~~N~i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 94 LLNLQGNSLCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp EEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred EEECCCCcCCcCccHHHHHHHHCcCcceE
Confidence 999999999742 345555555566544
No 13
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.92 E-value=3.6e-10 Score=112.49 Aligned_cols=201 Identities=14% Similarity=0.100 Sum_probs=133.7
Q ss_pred EEEEECCeeccccceeccCCCccceeeeeeEeecCCceEEEEEcccchhhhhhccccccccCCCCCCchhHHHH-HHHHH
Q 006793 308 FDILVNDKNVTRVDIFNSVGSFAAYSWHYVAKNLSSTELTVKLVPVVGAALISGLENYALVPNDLSTVPEQVIA-MRALK 386 (631)
Q Consensus 308 F~V~in~~~l~~~di~~~~g~~~~~~~~~~~l~ls~n~L~~~l~~~~~~~~Ln~lEi~~l~~~~~~~~p~~~~~-l~~l~ 386 (631)
+.|..+++.+..++. ..+ .....+++++|+++ .+++..- ..+..++.+.+..+....++..... +..++
T Consensus 14 ~~v~c~~~~L~~iP~-----~ip---~~~~~L~Ls~N~i~-~i~~~~f-~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~ 83 (284)
T d1ozna_ 14 VTTSCPQQGLQAVPV-----GIP---AASQRIFLHGNRIS-HVPAASF-RACRNLTILWLHSNVLARIDAAAFTGLALLE 83 (284)
T ss_dssp CEEECCSSCCSSCCT-----TCC---TTCSEEECTTSCCC-EECTTTT-TTCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred eEEEcCCCCCCccCC-----CCC---CCCCEEECcCCcCC-CCCHHHh-hcccccccccccccccccccccccccccccc
Confidence 456666655554431 111 12456778888887 6665421 1255677777766665544432110 00000
Q ss_pred HhcCCCCCCCCCCCCCCCCCCCCCcceeecCCCCCceeEEEEEEecCCCCcccCchhhcccccccccccccccCCCCCCC
Q 006793 387 ESLRVPDRMGWNGDPCAPTNWDAWEGITCHPNKDETAVVISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPS 466 (631)
Q Consensus 387 ~~~~~~~~~~w~gdpc~~~~~~~w~gv~c~~~~~~~~~~l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~ 466 (631)
...... .. .-..+. +.....+.+|+.|+|++|.+.+..+..+..+.+|+.+++++|++++..+.
T Consensus 84 ~l~~~~--~~------------~~~~l~--~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~ 147 (284)
T d1ozna_ 84 QLDLSD--NA------------QLRSVD--PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDD 147 (284)
T ss_dssp EEECCS--CT------------TCCCCC--TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred cccccc--cc------------cccccc--chhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChh
Confidence 000000 00 000010 01122345688999999999877788899999999999999999944445
Q ss_pred cccc-ccccccccccccCCCCCCccCCCCCCCCEEEcccCcCccccchhhhhccCCCCeEeecCCCCCCC
Q 006793 467 GLGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVLLNNNLLEGRVPEELYSIGVHGGAFDLSGNKGLCG 535 (631)
Q Consensus 467 ~~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP~~l~~~~~~L~~l~l~~N~~lc~ 535 (631)
.+.. ++|+.|+|++|++++..|..+.++++|+.+++++|++++..|..+..+. +++.|++++|.+...
T Consensus 148 ~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~-~L~~L~l~~N~i~~~ 216 (284)
T d1ozna_ 148 TFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG-RLMTLYLFANNLSAL 216 (284)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT-TCCEEECCSSCCSCC
T ss_pred HhccccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhh-hcccccccccccccc
Confidence 5666 8999999999999987788899999999999999999988888876665 899999999996543
No 14
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.89 E-value=1.1e-09 Score=98.88 Aligned_cols=99 Identities=23% Similarity=0.263 Sum_probs=80.0
Q ss_pred CCcceeecCCC-------CCceeEEEEEEecCC-CCcccCchhhcccccccccccccccCCCCCCCcccc-ccccccccc
Q 006793 409 AWEGITCHPNK-------DETAVVISQIDLGSQ-GLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLS 479 (631)
Q Consensus 409 ~w~gv~c~~~~-------~~~~~~l~~L~Ls~n-~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls 479 (631)
.++++.|.... ...+.+|+.|++++| .|+..-+..|.++++|+.|+|++|+|+..-|..+.. ++|+.|+|+
T Consensus 9 ~~~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls 88 (156)
T d2ifga3 9 GSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (156)
T ss_dssp SSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CCCeEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceecc
Confidence 46778886432 223457899999876 488666778999999999999999999444555777 999999999
Q ss_pred cccCCCCCCccCCCCCCCCEEEcccCcCc
Q 006793 480 DNQFTGSIPDSLTSSSKLQLVLLNNNLLE 508 (631)
Q Consensus 480 ~N~l~g~iP~~l~~l~~L~~L~ls~N~l~ 508 (631)
+|+|+ .+|.......+|+.|+|++|.|.
T Consensus 89 ~N~l~-~l~~~~~~~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 89 FNALE-SLSWKTVQGLSLQELVLSGNPLH 116 (156)
T ss_dssp SSCCS-CCCSTTTCSCCCCEEECCSSCCC
T ss_pred CCCCc-ccChhhhccccccccccCCCccc
Confidence 99999 68877666668999999999995
No 15
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.86 E-value=1.3e-09 Score=109.22 Aligned_cols=109 Identities=21% Similarity=0.296 Sum_probs=94.6
Q ss_pred eEEEEEEecCCCCcccCchhhcccccccccccccccCCCCCCCcccc-ccccccccccccCCCCCCccCCCCCCCCEEEc
Q 006793 424 VVISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVLL 502 (631)
Q Consensus 424 ~~l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 502 (631)
.+++.|++++|...+..+..+.+++.++.|++++|.+++..|..+.. ++|+.|+|++|+|+ .+|.++..+++|++|+|
T Consensus 171 ~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~L 249 (305)
T d1xkua_ 171 PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYL 249 (305)
T ss_dssp TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEEC
T ss_pred CccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccccccCCCEEEC
Confidence 35788999999999999999999999999999999999766777777 99999999999999 78999999999999999
Q ss_pred ccCcCccccchhhh------hccCCCCeEeecCCCCCC
Q 006793 503 NNNLLEGRVPEELY------SIGVHGGAFDLSGNKGLC 534 (631)
Q Consensus 503 s~N~l~g~iP~~l~------~~~~~L~~l~l~~N~~lc 534 (631)
++|+++ .|+...+ ....+|+.+++++|++.+
T Consensus 250 s~N~i~-~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~ 286 (305)
T d1xkua_ 250 HNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 286 (305)
T ss_dssp CSSCCC-CCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred CCCccC-ccChhhccCcchhcccCCCCEEECCCCcCcc
Confidence 999998 6654432 223468899999999765
No 16
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.84 E-value=5.8e-10 Score=107.91 Aligned_cols=103 Identities=14% Similarity=0.179 Sum_probs=81.8
Q ss_pred CCCcceeecCCCCCc-----eeEEEEEEecCCCCcccCchhhcccccccccccccccCCCCCCCc-ccc-ccccccccc-
Q 006793 408 DAWEGITCHPNKDET-----AVVISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSG-LGQ-QSLVRLDLS- 479 (631)
Q Consensus 408 ~~w~gv~c~~~~~~~-----~~~l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~-~~~-~~L~~L~Ls- 479 (631)
|....+.|....... ...++.|+|++|.++...+..|.++++|++|+|++|.+...+|.. +.. +.++.+.+.
T Consensus 8 C~~~~i~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 8 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp ECSSEEEEESCSCSSCCSCSCSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CcCCEEEEeCCCCCCcCCCCCCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 667778887543221 236899999999998655567999999999999999998667664 455 888888876
Q ss_pred cccCCCCCCccCCCCCCCCEEEcccCcCccc
Q 006793 480 DNQFTGSIPDSLTSSSKLQLVLLNNNLLEGR 510 (631)
Q Consensus 480 ~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~ 510 (631)
.|++....|..+.++++|+.|++++|.+...
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~ 118 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHL 118 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCSC
T ss_pred cccccccccccccccccccccccchhhhccc
Confidence 4778877777889999999999999999743
No 17
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.76 E-value=3.1e-09 Score=99.79 Aligned_cols=100 Identities=26% Similarity=0.372 Sum_probs=80.2
Q ss_pred eEEEEEEecCCCCcccCchhhcccccccccccccccCCCCCCCcccc-ccccccccccccCCCCCCccCCCCCCCCEEEc
Q 006793 424 VVISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVLL 502 (631)
Q Consensus 424 ~~l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 502 (631)
..++.|++++|+++. + +.+..+++|++|+|++|++++ +++ +.. ++|+.|++++|.+. .+| .+.+++.|+.|++
T Consensus 40 ~~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~-~~~-l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~l 113 (199)
T d2omxa2 40 DQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIA-DIT-PLANLTNLTGLTL 113 (199)
T ss_dssp TTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEEC
T ss_pred cCCCEEECCCCCCCC-c-cccccCCCcCcCccccccccC-ccc-ccCCcccccccccccccc-ccc-ccccccccccccc
Confidence 347889999999884 4 358889999999999999994 544 777 99999999999987 465 4889999999999
Q ss_pred ccCcCccccchhhhhccCCCCeEeecCCCC
Q 006793 503 NNNLLEGRVPEELYSIGVHGGAFDLSGNKG 532 (631)
Q Consensus 503 s~N~l~g~iP~~l~~~~~~L~~l~l~~N~~ 532 (631)
++|.+.... .+..+ .+|+.+++++|+.
T Consensus 114 ~~~~~~~~~--~~~~l-~~L~~L~l~~n~l 140 (199)
T d2omxa2 114 FNNQITDID--PLKNL-TNLNRLELSSNTI 140 (199)
T ss_dssp CSSCCCCCG--GGTTC-TTCSEEECCSSCC
T ss_pred ccccccccc--ccchh-hhhHHhhhhhhhh
Confidence 999887432 24344 4789999999874
No 18
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.71 E-value=5.9e-09 Score=98.80 Aligned_cols=99 Identities=26% Similarity=0.309 Sum_probs=72.2
Q ss_pred EEEEEEecCCCCcccCchhhcccccccccccccccCCCCCCCcccc-ccccccccccccCCCCCCccCCCCCCCCEEEcc
Q 006793 425 VISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVLLN 503 (631)
Q Consensus 425 ~l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls 503 (631)
.|+.|++++|.++.. + .+..+++|+.|+|++|++++ +++ ++. ++|+.|++++|+++ .+| .+.++++|+.|+++
T Consensus 47 ~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~-l~~-~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~ 120 (210)
T d1h6ta2 47 SIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKVK-DLS-SLKDLKKLKSLSLE 120 (210)
T ss_dssp TCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCC-CGG-GGTTCTTCCEEECT
T ss_pred CccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccC-ccc-cccCcccccccccccccc-ccc-cccccccccccccc
Confidence 477788888888743 2 37788888888888888884 553 456 88888888888887 465 47788888888888
Q ss_pred cCcCccccchhhhhccCCCCeEeecCCCC
Q 006793 504 NNLLEGRVPEELYSIGVHGGAFDLSGNKG 532 (631)
Q Consensus 504 ~N~l~g~iP~~l~~~~~~L~~l~l~~N~~ 532 (631)
+|.+. .++ .+..+. .++.+++++|..
T Consensus 121 ~~~~~-~~~-~l~~l~-~l~~l~~~~n~l 146 (210)
T d1h6ta2 121 HNGIS-DIN-GLVHLP-QLESLYLGNNKI 146 (210)
T ss_dssp TSCCC-CCG-GGGGCT-TCCEEECCSSCC
T ss_pred ccccc-ccc-cccccc-cccccccccccc
Confidence 88876 333 344443 677888877764
No 19
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.68 E-value=8.1e-09 Score=93.69 Aligned_cols=88 Identities=18% Similarity=0.164 Sum_probs=74.0
Q ss_pred hhcccccccccccccccCCCCCCCcccc-ccccccccccccCCCCCCccCCCCCCCCEEEcccCcCccccchhhhhccCC
Q 006793 443 KISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVLLNNNLLEGRVPEELYSIGVH 521 (631)
Q Consensus 443 ~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP~~l~~~~~~ 521 (631)
.+.++..|+.|+|++|+++ .||..... ++|+.|+|++|+++ .++ .+..+++|+.|++++|+++ .+|..++...++
T Consensus 13 ~~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~-~l~~~~~~~l~~ 88 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRIC-RIGEGLDQALPD 88 (162)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCC-EECSCHHHHCTT
T ss_pred hccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhccccccc-CCCccccccccc
Confidence 3567788999999999999 78876666 89999999999999 675 5889999999999999999 566665554458
Q ss_pred CCeEeecCCCCCC
Q 006793 522 GGAFDLSGNKGLC 534 (631)
Q Consensus 522 L~~l~l~~N~~lc 534 (631)
++.|++++|++..
T Consensus 89 L~~L~L~~N~i~~ 101 (162)
T d1a9na_ 89 LTELILTNNSLVE 101 (162)
T ss_dssp CCEEECCSCCCCC
T ss_pred cccceeccccccc
Confidence 9999999998643
No 20
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.63 E-value=4.3e-10 Score=105.96 Aligned_cols=104 Identities=21% Similarity=0.245 Sum_probs=85.7
Q ss_pred eeEEEEEEecCCCCcccCchhhcccccccccccccccCCCCCCCcccc-ccccccccccccCCCCCCccCCCCCCCCEEE
Q 006793 423 AVVISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVL 501 (631)
Q Consensus 423 ~~~l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 501 (631)
+.+|+.|+|++|.++ .++ .+..|++|+.|+|++|.++ .+|..... ++|+.|++++|+++ .++ .+..+++|+.|+
T Consensus 47 L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~ 121 (198)
T d1m9la_ 47 LKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIA-SLS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECC-CHH-HHHHHHHSSEEE
T ss_pred ccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-ccccccccccccccccccccccc-ccc-cccccccccccc
Confidence 456889999999998 454 5899999999999999998 78876666 78999999999998 454 478889999999
Q ss_pred cccCcCccccc--hhhhhccCCCCeEeecCCCCC
Q 006793 502 LNNNLLEGRVP--EELYSIGVHGGAFDLSGNKGL 533 (631)
Q Consensus 502 ls~N~l~g~iP--~~l~~~~~~L~~l~l~~N~~l 533 (631)
+++|+++ .++ ..+..+ ++|+.|++++|+..
T Consensus 122 L~~N~i~-~~~~~~~l~~l-~~L~~L~L~~N~l~ 153 (198)
T d1m9la_ 122 MSNNKIT-NWGEIDKLAAL-DKLEDLLLAGNPLY 153 (198)
T ss_dssp ESEEECC-CHHHHHHHTTT-TTCSEEEECSSHHH
T ss_pred cccchhc-cccccccccCC-CccceeecCCCccc
Confidence 9999998 444 234444 48999999999843
No 21
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=98.39 E-value=1.2e-07 Score=97.10 Aligned_cols=96 Identities=21% Similarity=0.353 Sum_probs=68.7
Q ss_pred EEEEEecCCCCcccCchhhcccccccccccccccCCCCCCCcccc-ccccccccccccCCCCCCccCCCCCCCCEEEccc
Q 006793 426 ISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVLLNN 504 (631)
Q Consensus 426 l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~ 504 (631)
++.++++.|.+++ ...+..+++++.|+|++|++++ +++ +.. ++|+.|++++|++++ +| .++++++|++|++++
T Consensus 287 l~~l~~~~n~l~~--~~~~~~~~~l~~L~ls~n~l~~-l~~-l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~ 360 (384)
T d2omza2 287 LTNLELNENQLED--ISPISNLKNLTYLTLYFNNISD-ISP-VSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGH 360 (384)
T ss_dssp CSEEECCSSCCSC--CGGGGGCTTCSEEECCSSCCSC-CGG-GGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCS
T ss_pred ccccccccccccc--ccccchhcccCeEECCCCCCCC-Ccc-cccCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEEECCC
Confidence 4567777777765 2347777888888888888884 432 566 788888888888873 54 577888888888888
Q ss_pred CcCccccchhhhhccCCCCeEeecCC
Q 006793 505 NLLEGRVPEELYSIGVHGGAFDLSGN 530 (631)
Q Consensus 505 N~l~g~iP~~l~~~~~~L~~l~l~~N 530 (631)
|++++..| +..+. +|+.|++++|
T Consensus 361 N~l~~l~~--l~~l~-~L~~L~L~~N 383 (384)
T d2omza2 361 NQISDLTP--LANLT-RITQLGLNDQ 383 (384)
T ss_dssp SCCCBCGG--GTTCT-TCSEEECCCE
T ss_pred CcCCCChh--hccCC-CCCEeeCCCC
Confidence 88885544 44443 7788888776
No 22
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.36 E-value=2.6e-07 Score=86.20 Aligned_cols=101 Identities=23% Similarity=0.369 Sum_probs=75.8
Q ss_pred eeEEEEEEecCCCCcccCchhhcccccccccccccccCCCCCCCcccc-ccccccccccccCCCCCCccCCCCCCCCEEE
Q 006793 423 AVVISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVL 501 (631)
Q Consensus 423 ~~~l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ 501 (631)
+.+|+.|+|++|.+++..| ++++++|+.|++++|.+. .++. +.. +.|+.|++++|.+.. + ..+..+++|+.|+
T Consensus 61 l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~-~~~~-l~~l~~L~~L~l~~~~~~~-~-~~~~~l~~L~~L~ 134 (199)
T d2omxa2 61 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA-DITP-LANLTNLTGLTLFNNQITD-I-DPLKNLTNLNRLE 134 (199)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CCGG-GTTCTTCSEEECCSSCCCC-C-GGGTTCTTCSEEE
T ss_pred CCCcCcCccccccccCccc--ccCCcccccccccccccc-cccc-ccccccccccccccccccc-c-cccchhhhhHHhh
Confidence 3458889999999886433 888899999999999887 5654 566 888899998888874 3 3477888899999
Q ss_pred cccCcCccccchhhhhccCCCCeEeecCCCC
Q 006793 502 LNNNLLEGRVPEELYSIGVHGGAFDLSGNKG 532 (631)
Q Consensus 502 ls~N~l~g~iP~~l~~~~~~L~~l~l~~N~~ 532 (631)
+++|++. .+| .+... .+++.|++.+|.+
T Consensus 135 l~~n~l~-~~~-~l~~~-~~L~~L~l~~n~l 162 (199)
T d2omxa2 135 LSSNTIS-DIS-ALSGL-TSLQQLNFSSNQV 162 (199)
T ss_dssp CCSSCCC-CCG-GGTTC-TTCSEEECCSSCC
T ss_pred hhhhhhc-ccc-ccccc-ccccccccccccc
Confidence 9988887 344 34443 3778888888763
No 23
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.24 E-value=6e-07 Score=84.46 Aligned_cols=99 Identities=24% Similarity=0.297 Sum_probs=56.4
Q ss_pred EEEEEEecCCCCcccCchhhcccccccccccccccCCCCCCCcccc-ccccccccccccCCCCCCccCCCCCCCCEEEcc
Q 006793 425 VISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVLLN 503 (631)
Q Consensus 425 ~l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls 503 (631)
+|+.|++++|++++ +| .+..+++|+.|++++|.+. .++ .+.. +.|+.++++.|.+++ +..+..+++|+.++++
T Consensus 91 ~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~~~~~-~~~-~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~ 164 (210)
T d1h6ta2 91 NLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGIS-DIN-GLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLE 164 (210)
T ss_dssp TCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCC-CCG-GGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECC
T ss_pred cccccccccccccc-cc-ccccccccccccccccccc-ccc-cccccccccccccccccccc--cccccccccccccccc
Confidence 35566666666653 33 3556666666666666655 333 3444 566666666666653 2345556667777777
Q ss_pred cCcCccccchhhhhccCCCCeEeecCCCC
Q 006793 504 NNLLEGRVPEELYSIGVHGGAFDLSGNKG 532 (631)
Q Consensus 504 ~N~l~g~iP~~l~~~~~~L~~l~l~~N~~ 532 (631)
+|++++ +++ +..+ .+|+.|++++|++
T Consensus 165 ~n~l~~-i~~-l~~l-~~L~~L~Ls~N~i 190 (210)
T d1h6ta2 165 DNQISD-IVP-LAGL-TKLQNLYLSKNHI 190 (210)
T ss_dssp SSCCCC-CGG-GTTC-TTCCEEECCSSCC
T ss_pred cccccc-ccc-ccCC-CCCCEEECCCCCC
Confidence 776663 332 3333 3566677766653
No 24
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=98.23 E-value=4.7e-07 Score=86.16 Aligned_cols=99 Identities=20% Similarity=0.337 Sum_probs=70.2
Q ss_pred eEEEEEEecCCCCcccCchhhcccccccccccccccCCCCCCCcccc-ccccccccccccCCCCCCccCCCCCCCCEEEc
Q 006793 424 VVISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVLL 502 (631)
Q Consensus 424 ~~l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 502 (631)
..|+.|++.+|+++. + +.+..|++|+.|+|++|.+++ +++ +.. ++|+.+++++|.++ .++ .+..+++|+.+++
T Consensus 41 ~~L~~L~l~~~~i~~-l-~~l~~l~~L~~L~ls~n~i~~-~~~-l~~l~~l~~l~~~~n~~~-~i~-~l~~l~~L~~l~l 114 (227)
T d1h6ua2 41 DGITTLSAFGTGVTT-I-EGVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLK-NVS-AIAGLQSIKTLDL 114 (227)
T ss_dssp HTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEEEC
T ss_pred CCcCEEECCCCCCCc-c-hhHhcCCCCcEeecCCceeec-ccc-cccccccccccccccccc-ccc-ccccccccccccc
Confidence 457888888888874 4 358888888888888888884 332 566 88888888888887 454 4778888888888
Q ss_pred ccCcCccccchhhhhccCCCCeEeecCCC
Q 006793 503 NNNLLEGRVPEELYSIGVHGGAFDLSGNK 531 (631)
Q Consensus 503 s~N~l~g~iP~~l~~~~~~L~~l~l~~N~ 531 (631)
+++...+..+ +... ..+..+.++++.
T Consensus 115 ~~~~~~~~~~--~~~~-~~~~~l~~~~~~ 140 (227)
T d1h6ua2 115 TSTQITDVTP--LAGL-SNLQVLYLDLNQ 140 (227)
T ss_dssp TTSCCCCCGG--GTTC-TTCCEEECCSSC
T ss_pred ccccccccch--hccc-cchhhhhchhhh
Confidence 8888764332 1122 245566665554
No 25
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.20 E-value=7.3e-08 Score=90.20 Aligned_cols=89 Identities=20% Similarity=0.232 Sum_probs=74.8
Q ss_pred cCchhhcccccccccccccccCCCCCCCcccc-ccccccccccccCCCCCCccCCCCCCCCEEEcccCcCccccchhhhh
Q 006793 439 YISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVLLNNNLLEGRVPEELYS 517 (631)
Q Consensus 439 ~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N~l~g~iP~~l~~ 517 (631)
.++.++..|++|++|+|++|+++ .++ .+.. ++|+.|+|++|+++ .+|.....+++|+.|++++|+++ .++ .+..
T Consensus 39 ~l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~-~l~-~~~~ 113 (198)
T d1m9la_ 39 KMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIA-SLS-GIEK 113 (198)
T ss_dssp CCHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECC-CHH-HHHH
T ss_pred hhhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-ccccccccccccccccccccccc-ccc-cccc
Confidence 56788999999999999999999 776 4777 99999999999998 68876666678999999999998 444 3555
Q ss_pred ccCCCCeEeecCCCCC
Q 006793 518 IGVHGGAFDLSGNKGL 533 (631)
Q Consensus 518 ~~~~L~~l~l~~N~~l 533 (631)
+. +|+.|++++|.+.
T Consensus 114 l~-~L~~L~L~~N~i~ 128 (198)
T d1m9la_ 114 LV-NLRVLYMSNNKIT 128 (198)
T ss_dssp HH-HSSEEEESEEECC
T ss_pred cc-cccccccccchhc
Confidence 54 7899999999853
No 26
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=98.16 E-value=5.2e-07 Score=92.21 Aligned_cols=76 Identities=17% Similarity=0.255 Sum_probs=66.2
Q ss_pred eEEEEEEecCCCCcccCchhhcccccccccccccccCCCCCCCcccc-ccccccccccccCCCCCCccCCCCCCCCEEEc
Q 006793 424 VVISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVLL 502 (631)
Q Consensus 424 ~~l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~l 502 (631)
..++.|+|++|++++.. .+..+++|+.|+|++|+++ .+| .+.. ++|+.|+|++|++++. |+ +.++++|+.|+|
T Consensus 307 ~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~-~l~-~l~~l~~L~~L~l~~N~l~~l-~~-l~~l~~L~~L~L 380 (384)
T d2omza2 307 KNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVS-DVS-SLANLTNINWLSAGHNQISDL-TP-LANLTRITQLGL 380 (384)
T ss_dssp TTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCC-CCG-GGGGCTTCCEEECCSSCCCBC-GG-GTTCTTCSEEEC
T ss_pred cccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCC-CCh-hHcCCCCCCEEECCCCcCCCC-hh-hccCCCCCEeeC
Confidence 34788999999999753 3889999999999999999 565 5788 9999999999999964 43 899999999999
Q ss_pred ccC
Q 006793 503 NNN 505 (631)
Q Consensus 503 s~N 505 (631)
++|
T Consensus 381 ~~N 383 (384)
T d2omza2 381 NDQ 383 (384)
T ss_dssp CCE
T ss_pred CCC
Confidence 998
No 27
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=98.11 E-value=1.4e-06 Score=82.79 Aligned_cols=94 Identities=23% Similarity=0.290 Sum_probs=65.7
Q ss_pred EEEEEecCCCCcccCchhhcccccccccccccccCCCCCCCcccc-ccccccccccccCCCCCCccCCCCCCCCEEEccc
Q 006793 426 ISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVLLNN 504 (631)
Q Consensus 426 l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~ 504 (631)
+..+.++.+.+... ..+..+++|+.|++++|.+++ ++. ++. ++|+.|+|++|++++ +|. ++++++|++|+|++
T Consensus 131 ~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~-~~~-l~~l~~L~~L~Ls~n~l~~-l~~-l~~l~~L~~L~Ls~ 204 (227)
T d1h6ua2 131 LQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISD-ISP-LASLPNLIEVHLKN 204 (227)
T ss_dssp CCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECTT
T ss_pred hhhhhchhhhhchh--hhhcccccccccccccccccc-chh-hcccccceecccCCCccCC-Chh-hcCCCCCCEEECcC
Confidence 45667777777643 236677888888888888773 332 566 888888888888874 543 77888888888888
Q ss_pred CcCccccchhhhhccCCCCeEeec
Q 006793 505 NLLEGRVPEELYSIGVHGGAFDLS 528 (631)
Q Consensus 505 N~l~g~iP~~l~~~~~~L~~l~l~ 528 (631)
|+++ .+|+ +..+ ++|+.|+++
T Consensus 205 N~lt-~i~~-l~~l-~~L~~L~ls 225 (227)
T d1h6ua2 205 NQIS-DVSP-LANT-SNLFIVTLT 225 (227)
T ss_dssp SCCC-BCGG-GTTC-TTCCEEEEE
T ss_pred CcCC-CCcc-cccC-CCCCEEEee
Confidence 8887 4443 4444 377788775
No 28
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.05 E-value=4.2e-06 Score=83.89 Aligned_cols=93 Identities=29% Similarity=0.366 Sum_probs=59.4
Q ss_pred EEEEEecCCCCcccCchhhcccccccccccccccCCCCCCCccccccccccccccccCCCCCCccCCCCCCCCEEEcccC
Q 006793 426 ISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQQSLVRLDLSDNQFTGSIPDSLTSSSKLQLVLLNNN 505 (631)
Q Consensus 426 l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N 505 (631)
++.|+|++++|+ .+|+. +++|++|+|++|+|+ .+|..+ .+|+.|++++|+++ .++.. .+.|++|++++|
T Consensus 40 l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~--~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~~n 108 (353)
T d1jl5a_ 40 AHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP--QSLKSLLVDNNNLK-ALSDL---PPLLEYLGVSNN 108 (353)
T ss_dssp CSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC--TTCCEEECCSSCCS-CCCSC---CTTCCEEECCSS
T ss_pred CCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch--hhhhhhhhhhcccc-hhhhh---cccccccccccc
Confidence 567777777776 46643 456777777777777 777543 46777777777776 45431 135777777777
Q ss_pred cCccccchhhhhccCCCCeEeecCCCC
Q 006793 506 LLEGRVPEELYSIGVHGGAFDLSGNKG 532 (631)
Q Consensus 506 ~l~g~iP~~l~~~~~~L~~l~l~~N~~ 532 (631)
.++ .+|. ...+ .+|+.+++++|..
T Consensus 109 ~l~-~lp~-~~~l-~~L~~L~l~~~~~ 132 (353)
T d1jl5a_ 109 QLE-KLPE-LQNS-SFLKIIDVDNNSL 132 (353)
T ss_dssp CCS-SCCC-CTTC-TTCCEEECCSSCC
T ss_pred ccc-cccc-hhhh-ccceeeccccccc
Confidence 776 5554 2333 3667777766653
No 29
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.70 E-value=1.4e-05 Score=76.03 Aligned_cols=102 Identities=15% Similarity=0.160 Sum_probs=80.2
Q ss_pred EEEEecCCCCcccCchhhcccccccccccccccCCCCCCC-cccc-ccccccccccccCCCCCCc-cCCCCCCCCEEEcc
Q 006793 427 SQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPS-GLGQ-QSLVRLDLSDNQFTGSIPD-SLTSSSKLQLVLLN 503 (631)
Q Consensus 427 ~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~-~~~~-~~L~~L~Ls~N~l~g~iP~-~l~~l~~L~~L~ls 503 (631)
+.++.++++++ .+|+.+. ++++.|+|++|+++ .+|. .+.. ++|++|+|++|.+...+|. .|.+++.++.+++.
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~-~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~ 86 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 86 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCC-EECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEE
T ss_pred CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCC-ccChhHhhccchhhhhhhccccccceeecccccccccccccccc
Confidence 36788888888 7887654 57999999999999 6776 4667 9999999999998866654 57889999999986
Q ss_pred c-CcCccccchhhhhccCCCCeEeecCCCCC
Q 006793 504 N-NLLEGRVPEELYSIGVHGGAFDLSGNKGL 533 (631)
Q Consensus 504 ~-N~l~g~iP~~l~~~~~~L~~l~l~~N~~l 533 (631)
. |++....+..+..+ ++|+.+++++|.+.
T Consensus 87 ~~n~l~~~~~~~~~~l-~~L~~l~l~~~~l~ 116 (242)
T d1xwdc1 87 KANNLLYINPEAFQNL-PNLQYLLISNTGIK 116 (242)
T ss_dssp CCTTCCEECTTSEECC-TTCCEEEEESCCCC
T ss_pred cccccccccccccccc-ccccccccchhhhc
Confidence 4 67775555545444 48999999998754
No 30
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.53 E-value=6.3e-06 Score=85.50 Aligned_cols=106 Identities=24% Similarity=0.315 Sum_probs=61.6
Q ss_pred EEEEEEecCCCCccc-CchhhcccccccccccccccCCC----CCCCcccc-ccccccccccccCCC----CCCccCC-C
Q 006793 425 VISQIDLGSQGLKGY-ISDKISLLSNLVNLNLSTNSLGG----TLPSGLGQ-QSLVRLDLSDNQFTG----SIPDSLT-S 493 (631)
Q Consensus 425 ~l~~L~Ls~n~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g----~iP~~~~~-~~L~~L~Ls~N~l~g----~iP~~l~-~ 493 (631)
+|+.|||++|++++. +..-+..+++|+.|+|++|.++- .|...+.. ++|+.|||++|+++. .+...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 577777777777652 23345566777777777777651 12333444 677777777777641 1222222 1
Q ss_pred CCCCCEEEcccCcCccc----cchhhhhccCCCCeEeecCCC
Q 006793 494 SSKLQLVLLNNNLLEGR----VPEELYSIGVHGGAFDLSGNK 531 (631)
Q Consensus 494 l~~L~~L~ls~N~l~g~----iP~~l~~~~~~L~~l~l~~N~ 531 (631)
..+|+.|+|++|+++.. ++..+... .+|+.|++++|.
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~-~~L~~L~L~~N~ 123 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTL-PTLQELHLSDNL 123 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSC-TTCCEEECCSSB
T ss_pred CCCCCEEECCCCCccccccccccchhhcc-cccccccccccc
Confidence 24677777777777633 22222222 367777777776
No 31
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.50 E-value=6.7e-06 Score=73.74 Aligned_cols=86 Identities=24% Similarity=0.198 Sum_probs=57.8
Q ss_pred cCchhhcccccccccccccccCCCCCC---Ccccc-ccccccccccccCCCCCCc-cCCCCCCCCEEEcccCcCccccch
Q 006793 439 YISDKISLLSNLVNLNLSTNSLGGTLP---SGLGQ-QSLVRLDLSDNQFTGSIPD-SLTSSSKLQLVLLNNNLLEGRVPE 513 (631)
Q Consensus 439 ~~p~~~~~l~~L~~L~Ls~N~l~g~iP---~~~~~-~~L~~L~Ls~N~l~g~iP~-~l~~l~~L~~L~ls~N~l~g~iP~ 513 (631)
.++.....++.|++|+|++|+++ .++ ..+.. ++|+.|+|++|+++ .+++ .......|+.|++++|.++.....
T Consensus 56 ~l~~~~~~~~~L~~L~Ls~N~i~-~l~~~~~~~~~l~~L~~L~Ls~N~i~-~l~~l~~l~~~~L~~L~L~~Npl~~~~~~ 133 (162)
T d1koha1 56 TLRIIEENIPELLSLNLSNNRLY-RLDDMSSIVQKAPNLKILNLSGNELK-SERELDKIKGLKLEELWLDGNSLSDTFRD 133 (162)
T ss_dssp HHHHHHHHCTTCCCCCCCSSCCC-CCSGGGTHHHHSTTCCCCCCTTSCCC-CGGGHHHHTTCCCSSCCCTTSTTSSSSSS
T ss_pred hhHHHHHhCCCCCEeeCCCcccc-CCchhHHHHhhCCcccccccccCccc-cchhhhhhhccccceeecCCCCcCcCccc
Confidence 34445567888888899988888 443 33445 88888899998888 4544 223345688888999988765542
Q ss_pred ------hhhhccCCCCeEe
Q 006793 514 ------ELYSIGVHGGAFD 526 (631)
Q Consensus 514 ------~l~~~~~~L~~l~ 526 (631)
.+.+..++|+.||
T Consensus 134 ~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 134 QSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHHHHHTTSTTCCEET
T ss_pred chhHHHHHHHHCCCCCEEC
Confidence 2334455777665
No 32
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.37 E-value=1.7e-05 Score=70.96 Aligned_cols=88 Identities=20% Similarity=0.125 Sum_probs=53.7
Q ss_pred hcccccccccccccccCCCCCCCcccc-ccccccccccccCCCC--CCccCCCCCCCCEEEcccCcCccccch-hhhhcc
Q 006793 444 ISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDNQFTGS--IPDSLTSSSKLQLVLLNNNLLEGRVPE-ELYSIG 519 (631)
Q Consensus 444 ~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N~l~g~--iP~~l~~l~~L~~L~ls~N~l~g~iP~-~l~~~~ 519 (631)
+..+..+..|++.++... .++..... ++|+.|+|++|+++.. ++..+..+++|+.|+|++|.++ .++. ......
T Consensus 38 l~~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~-~l~~l~~l~~~ 115 (162)
T d1koha1 38 LVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK-SERELDKIKGL 115 (162)
T ss_dssp TTTTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCC-CGGGHHHHTTC
T ss_pred hhhccchhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccc-cchhhhhhhcc
Confidence 444555556666655444 33333334 7788888888888732 2233556788888888888887 4443 222222
Q ss_pred CCCCeEeecCCCCCC
Q 006793 520 VHGGAFDLSGNKGLC 534 (631)
Q Consensus 520 ~~L~~l~l~~N~~lc 534 (631)
.++.+++++|+..+
T Consensus 116 -~L~~L~L~~Npl~~ 129 (162)
T d1koha1 116 -KLEELWLDGNSLSD 129 (162)
T ss_dssp -CCSSCCCTTSTTSS
T ss_pred -ccceeecCCCCcCc
Confidence 56778888888543
No 33
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=97.34 E-value=0.00013 Score=72.43 Aligned_cols=76 Identities=25% Similarity=0.333 Sum_probs=62.9
Q ss_pred EEEEEEecCCCCcccCchhhcccccccccccccccCCCCCCCccccccccccccccccCCCCCCccCCCCCCCCEEEccc
Q 006793 425 VISQIDLGSQGLKGYISDKISLLSNLVNLNLSTNSLGGTLPSGLGQQSLVRLDLSDNQFTGSIPDSLTSSSKLQLVLLNN 504 (631)
Q Consensus 425 ~l~~L~Ls~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~ 504 (631)
.|+.|+|++|+|+ .+|..+ .+|+.|++++|+++ .++... +.|++|++++|.+. .+|. ++.+++|+.|++++
T Consensus 59 ~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~lp--~~L~~L~L~~n~l~-~lp~-~~~l~~L~~L~l~~ 129 (353)
T d1jl5a_ 59 HLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDLP--PLLEYLGVSNNQLE-KLPE-LQNSSFLKIIDVDN 129 (353)
T ss_dssp TCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSCC--TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCS
T ss_pred CCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhhc--cccccccccccccc-cccc-hhhhccceeecccc
Confidence 4789999999999 778654 57888899999988 665321 57999999999998 6885 68899999999999
Q ss_pred CcCcc
Q 006793 505 NLLEG 509 (631)
Q Consensus 505 N~l~g 509 (631)
|.+.+
T Consensus 130 ~~~~~ 134 (353)
T d1jl5a_ 130 NSLKK 134 (353)
T ss_dssp SCCSC
T ss_pred ccccc
Confidence 98874
No 34
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.22 E-value=1.2e-05 Score=83.22 Aligned_cols=109 Identities=23% Similarity=0.176 Sum_probs=72.8
Q ss_pred EEEEEEecCCCCcccCch----hhcccccccccccccccCCCC----CCCcccc--ccccccccccccCCCC----CCcc
Q 006793 425 VISQIDLGSQGLKGYISD----KISLLSNLVNLNLSTNSLGGT----LPSGLGQ--QSLVRLDLSDNQFTGS----IPDS 490 (631)
Q Consensus 425 ~l~~L~Ls~n~l~g~~p~----~~~~l~~L~~L~Ls~N~l~g~----iP~~~~~--~~L~~L~Ls~N~l~g~----iP~~ 490 (631)
.|+.++++++.++..... .+...++|+.|+|++|.++.. ++..+.. ..|+.|+|++|+++.. +++.
T Consensus 313 ~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~ 392 (460)
T d1z7xw1 313 QLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAAT 392 (460)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHH
T ss_pred ccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHH
Confidence 467788888888754333 334456788999999888642 3334433 6688899999888642 4455
Q ss_pred CCCCCCCCEEEcccCcCccccchhhhh----ccCCCCeEeecCCCCC
Q 006793 491 LTSSSKLQLVLLNNNLLEGRVPEELYS----IGVHGGAFDLSGNKGL 533 (631)
Q Consensus 491 l~~l~~L~~L~ls~N~l~g~iP~~l~~----~~~~L~~l~l~~N~~l 533 (631)
+..+++|++|+|++|+++......+.+ ....|+.+++.+|.+.
T Consensus 393 l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~ 439 (460)
T d1z7xw1 393 LLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 439 (460)
T ss_dssp HHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCC
T ss_pred HhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCC
Confidence 666788999999999887544444332 2225778888877653
No 35
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=97.09 E-value=3.2e-05 Score=77.76 Aligned_cols=109 Identities=17% Similarity=0.196 Sum_probs=74.6
Q ss_pred EEEEEEecCCCCccc-----CchhhcccccccccccccccCCCC----CCCcccc-ccccccccccccCCCCCCcc----
Q 006793 425 VISQIDLGSQGLKGY-----ISDKISLLSNLVNLNLSTNSLGGT----LPSGLGQ-QSLVRLDLSDNQFTGSIPDS---- 490 (631)
Q Consensus 425 ~l~~L~Ls~n~l~g~-----~p~~~~~l~~L~~L~Ls~N~l~g~----iP~~~~~-~~L~~L~Ls~N~l~g~iP~~---- 490 (631)
.++.|+|++|.++.. +...+..+++|+.|+|++|.++.. +...+.. ++|+.|+|++|.+++.-...
T Consensus 187 ~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~ 266 (344)
T d2ca6a1 187 LLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDA 266 (344)
T ss_dssp TCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHH
T ss_pred hhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHHH
Confidence 377899999988632 344567788899999999987632 3344555 78999999999887531122
Q ss_pred CC--CCCCCCEEEcccCcCcccc----chhhhhccCCCCeEeecCCCCC
Q 006793 491 LT--SSSKLQLVLLNNNLLEGRV----PEELYSIGVHGGAFDLSGNKGL 533 (631)
Q Consensus 491 l~--~l~~L~~L~ls~N~l~g~i----P~~l~~~~~~L~~l~l~~N~~l 533 (631)
+. ....|++|++++|+++..- ...+......|+.|++++|.+.
T Consensus 267 l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~ 315 (344)
T d2ca6a1 267 FSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 315 (344)
T ss_dssp HHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred hhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCC
Confidence 22 2367999999999987432 2333222346889999998864
No 36
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.99 E-value=2.6e-05 Score=76.54 Aligned_cols=105 Identities=25% Similarity=0.290 Sum_probs=64.0
Q ss_pred EEEEEEecCCCCccc-CchhhcccccccccccccccCCCCCCCcccc-ccccccccccc-cCCCC-CCccCCCCCCCCEE
Q 006793 425 VISQIDLGSQGLKGY-ISDKISLLSNLVNLNLSTNSLGGTLPSGLGQ-QSLVRLDLSDN-QFTGS-IPDSLTSSSKLQLV 500 (631)
Q Consensus 425 ~l~~L~Ls~n~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-~~L~~L~Ls~N-~l~g~-iP~~l~~l~~L~~L 500 (631)
+|++|||+++.++.. +...+..+++|++|+|+++.+++..+..++. ++|+.|+|+++ .++.. +..-...+++|++|
T Consensus 47 ~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L 126 (284)
T d2astb2 47 RVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDEL 126 (284)
T ss_dssp CCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEE
T ss_pred CCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhcccc
Confidence 477788887776643 3445667778888888888777666666666 77888888774 44321 12223456777777
Q ss_pred EcccC-cCcc-ccchhhhhccCCCCeEeecC
Q 006793 501 LLNNN-LLEG-RVPEELYSIGVHGGAFDLSG 529 (631)
Q Consensus 501 ~ls~N-~l~g-~iP~~l~~~~~~L~~l~l~~ 529 (631)
+++++ .++. .++..+....+.|+.|++++
T Consensus 127 ~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~ 157 (284)
T d2astb2 127 NLSWCFDFTEKHVQVAVAHVSETITQLNLSG 157 (284)
T ss_dssp ECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred ccccccccccccchhhhcccccccchhhhcc
Confidence 77763 4432 22333334444566666654
No 37
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=96.91 E-value=5.5e-05 Score=75.99 Aligned_cols=107 Identities=25% Similarity=0.262 Sum_probs=72.0
Q ss_pred EEEEEEecCCCCcc----cCchhhcccccccccccccccCCCC-----CCCcccc-ccccccccccccCCCC----CCcc
Q 006793 425 VISQIDLGSQGLKG----YISDKISLLSNLVNLNLSTNSLGGT-----LPSGLGQ-QSLVRLDLSDNQFTGS----IPDS 490 (631)
Q Consensus 425 ~l~~L~Ls~n~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~-----iP~~~~~-~~L~~L~Ls~N~l~g~----iP~~ 490 (631)
.++.|++++|.++. .+...+...+.|+.|+|++|.++.. +...+.. ++|+.|+|++|.++.. +...
T Consensus 159 ~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~ 238 (344)
T d2ca6a1 159 PLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 238 (344)
T ss_dssp CCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHH
T ss_pred ccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhccccccccccccccccccccc
Confidence 36678888887762 2444566678888888888887632 2334555 7788888888887532 3445
Q ss_pred CCCCCCCCEEEcccCcCccccchhhhhc-----cCCCCeEeecCCC
Q 006793 491 LTSSSKLQLVLLNNNLLEGRVPEELYSI-----GVHGGAFDLSGNK 531 (631)
Q Consensus 491 l~~l~~L~~L~ls~N~l~g~iP~~l~~~-----~~~L~~l~l~~N~ 531 (631)
+..+++|+.|+|++|.+++.-...+... ...++.|++++|.
T Consensus 239 l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~ 284 (344)
T d2ca6a1 239 LKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNE 284 (344)
T ss_dssp GGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSC
T ss_pred ccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCc
Confidence 6677888888998888875433333321 1357788888876
No 38
>d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}
Probab=96.70 E-value=0.0076 Score=51.90 Aligned_cols=80 Identities=20% Similarity=0.280 Sum_probs=61.2
Q ss_pred CceEEeecCCCcceEEEEEeecCCCCCCCCCCceEEEECCEEEeecCCCCccccCCCceEEEEEEEeeCCeeeEEEeecC
Q 006793 89 KNCYIIPNLPPGRYYIRTFTVYDNYDGKSHSPSFDVSVEGTLVFSWRSPWPEGLARDGAYSDLFAFVKDGELDLCFYSFA 168 (631)
Q Consensus 89 ~~cY~~pv~~~g~ylvRl~F~y~nyd~~~~~~~Fdv~i~~~~~l~~~~~~~~~~~~~~~~~e~i~~~~~~~l~v~~~~~~ 168 (631)
...|.+++ +.|.|.|+++|-- ....++.+.+...+..+. ....-+.|.+.+.++.|.|.|+...
T Consensus 64 ~~~f~v~v-PnG~Y~Vtv~~Gd--------~~~~~~~~eg~~~~~~~~-------g~~~~~~~~V~VtDG~L~l~ft~~~ 127 (146)
T d2o14a1 64 NNTFNVDL-PNGLYEVKVTLGN--------TARASVAAEGVFQVINMT-------GDGAEDTFQIPVTDGQLNLLVTEGK 127 (146)
T ss_dssp SCCEEEEC-CSEEEEEEEEESS--------CSEEEEEETTEEEEEEEE-------STTCEEEEEEEECSSEEEEEEEESS
T ss_pred CceEEEEC-CCCeEEEEEEEec--------CCCccEEEeeEEeccccC-------CccEEEEEEEEEECCeEEEEEecCC
Confidence 35899999 8999999999863 235678888877665442 2234467888899999999998655
Q ss_pred -CCCceeeeEEEEEcCC
Q 006793 169 -TDPPVIASLEVQQIDP 184 (631)
Q Consensus 169 -~~~pfIn~iEl~~l~~ 184 (631)
...|-||+|||.+.++
T Consensus 128 ~G~~~~in~l~I~~~~d 144 (146)
T d2o14a1 128 AGTAFTLSALKIKKLSD 144 (146)
T ss_dssp TTSCCEEEEEEEEEEES
T ss_pred CCCccEEEEEEEEeccc
Confidence 4579999999998765
No 39
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.66 E-value=0.00015 Score=70.91 Aligned_cols=87 Identities=18% Similarity=0.109 Sum_probs=65.5
Q ss_pred cccccccccccccccCCCCC-CCcccc-ccccccccccccCCCCCCccCCCCCCCCEEEcccC-cCccccchhhhhccCC
Q 006793 445 SLLSNLVNLNLSTNSLGGTL-PSGLGQ-QSLVRLDLSDNQFTGSIPDSLTSSSKLQLVLLNNN-LLEGRVPEELYSIGVH 521 (631)
Q Consensus 445 ~~l~~L~~L~Ls~N~l~g~i-P~~~~~-~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~L~ls~N-~l~g~iP~~l~~~~~~ 521 (631)
....+|++|||+++.++... +..+.. ++|+.|+|+++.+++..+..++.+++|++|+++++ .++..--..+....++
T Consensus 43 ~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~ 122 (284)
T d2astb2 43 FSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSR 122 (284)
T ss_dssp CCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTT
T ss_pred ccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHh
Confidence 34568999999999887543 333455 89999999999998888888999999999999984 6653211223333458
Q ss_pred CCeEeecCCC
Q 006793 522 GGAFDLSGNK 531 (631)
Q Consensus 522 L~~l~l~~N~ 531 (631)
|+.|+++++.
T Consensus 123 L~~L~ls~c~ 132 (284)
T d2astb2 123 LDELNLSWCF 132 (284)
T ss_dssp CCEEECCCCT
T ss_pred cccccccccc
Confidence 9999998754
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.06 E-value=0.00059 Score=60.85 Aligned_cols=84 Identities=10% Similarity=0.129 Sum_probs=58.2
Q ss_pred EEEEEEecCC-CCccc----CchhhcccccccccccccccCCCCCC----Ccccc-ccccccccccccCCCC----CCcc
Q 006793 425 VISQIDLGSQ-GLKGY----ISDKISLLSNLVNLNLSTNSLGGTLP----SGLGQ-QSLVRLDLSDNQFTGS----IPDS 490 (631)
Q Consensus 425 ~l~~L~Ls~n-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~iP----~~~~~-~~L~~L~Ls~N~l~g~----iP~~ 490 (631)
.|+.|+|+++ .++.. +-..+...+.|+.|+|++|.++..-. ..+.. +.|+.|+|++|.++.. +-..
T Consensus 16 ~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~a 95 (167)
T d1pgva_ 16 DLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRS 95 (167)
T ss_dssp SCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHH
T ss_pred CCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHH
Confidence 4888999874 46532 34456667889999999998873322 22334 7799999999988742 2224
Q ss_pred CCCCCCCCEEEcccCcCc
Q 006793 491 LTSSSKLQLVLLNNNLLE 508 (631)
Q Consensus 491 l~~l~~L~~L~ls~N~l~ 508 (631)
+...++|+.|++++|.+.
T Consensus 96 L~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 96 TLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp TTTTCCCSEEECCCCSSC
T ss_pred HHhCCcCCEEECCCCcCC
Confidence 566688999999888654
No 41
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=93.65 E-value=0.005 Score=54.44 Aligned_cols=87 Identities=13% Similarity=0.211 Sum_probs=58.8
Q ss_pred cccccccccccccc-cCCCC----CCCcccc-ccccccccccccCCCC----CCccCCCCCCCCEEEcccCcCccccchh
Q 006793 445 SLLSNLVNLNLSTN-SLGGT----LPSGLGQ-QSLVRLDLSDNQFTGS----IPDSLTSSSKLQLVLLNNNLLEGRVPEE 514 (631)
Q Consensus 445 ~~l~~L~~L~Ls~N-~l~g~----iP~~~~~-~~L~~L~Ls~N~l~g~----iP~~l~~l~~L~~L~ls~N~l~g~iP~~ 514 (631)
.+.+.|+.|+|+++ .++.. +-..+.. +.|+.|+|++|.+... +-..+...+.|+.|+|++|.++..--..
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 34588999999974 45422 1223444 7899999999988632 2223445688999999999998543333
Q ss_pred hhhc---cCCCCeEeecCCC
Q 006793 515 LYSI---GVHGGAFDLSGNK 531 (631)
Q Consensus 515 l~~~---~~~L~~l~l~~N~ 531 (631)
++.. ...|+.|++++|.
T Consensus 92 l~~aL~~n~sL~~L~l~~n~ 111 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQR 111 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHhCCcCCEEECCCCc
Confidence 3322 2368899998886
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=92.27 E-value=0.0068 Score=53.37 Aligned_cols=106 Identities=12% Similarity=0.158 Sum_probs=67.5
Q ss_pred EEEEEEecC-CCCcc----cCchhhcccccccccccccccCCCCCCC----cccc-ccccccccccccCCCC----CCcc
Q 006793 425 VISQIDLGS-QGLKG----YISDKISLLSNLVNLNLSTNSLGGTLPS----GLGQ-QSLVRLDLSDNQFTGS----IPDS 490 (631)
Q Consensus 425 ~l~~L~Ls~-n~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~iP~----~~~~-~~L~~L~Ls~N~l~g~----iP~~ 490 (631)
.|+.|+|++ +.++. .+-..+...++|+.|+|++|.++...-. .+.. ++|+.+++++|.+... +-..
T Consensus 18 ~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~ 97 (166)
T d1io0a_ 18 DLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEA 97 (166)
T ss_dssp TCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHG
T ss_pred CCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHH
Confidence 377889987 45652 2444566788899999999988743222 2334 7889999998887632 2244
Q ss_pred CCCCCCCCEEEc--ccCcCccc----cchhhhhccCCCCeEeecCCC
Q 006793 491 LTSSSKLQLVLL--NNNLLEGR----VPEELYSIGVHGGAFDLSGNK 531 (631)
Q Consensus 491 l~~l~~L~~L~l--s~N~l~g~----iP~~l~~~~~~L~~l~l~~N~ 531 (631)
+...++|+.++| ++|.+... +-..+... +.|+.|+++.+.
T Consensus 98 l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n-~~L~~L~l~~~~ 143 (166)
T d1io0a_ 98 LQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKN-TTLLKFGYHFTQ 143 (166)
T ss_dssp GGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHC-SSCCEEECCCSS
T ss_pred HHhCccccEEeeccCCCcCcHHHHHHHHHHHHhC-CCcCEEeCcCCC
Confidence 666788887665 46777532 33333333 367777776543
No 43
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=83.03 E-value=0.047 Score=47.59 Aligned_cols=84 Identities=15% Similarity=0.240 Sum_probs=59.2
Q ss_pred EEEEEEecCCCCccc----CchhhcccccccccccccccCCCC----CCCcccc-ccccc--cccccccCCC----CCCc
Q 006793 425 VISQIDLGSQGLKGY----ISDKISLLSNLVNLNLSTNSLGGT----LPSGLGQ-QSLVR--LDLSDNQFTG----SIPD 489 (631)
Q Consensus 425 ~l~~L~Ls~n~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----iP~~~~~-~~L~~--L~Ls~N~l~g----~iP~ 489 (631)
.|+.|+|++|.++.. +-..+...+.|+.|++++|.++.. +-..+.. ++|+. |+++.|.+.. .+-.
T Consensus 47 ~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~ 126 (166)
T d1io0a_ 47 YVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIAN 126 (166)
T ss_dssp SCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHH
T ss_pred ccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHHHHH
Confidence 378899999998743 444566778999999999988743 2233444 77876 4556777743 2334
Q ss_pred cCCCCCCCCEEEcccCcCc
Q 006793 490 SLTSSSKLQLVLLNNNLLE 508 (631)
Q Consensus 490 ~l~~l~~L~~L~ls~N~l~ 508 (631)
.+...++|+.|+++.|...
T Consensus 127 ~L~~n~~L~~L~l~~~~~~ 145 (166)
T d1io0a_ 127 MLEKNTTLLKFGYHFTQQG 145 (166)
T ss_dssp HHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCcCEEeCcCCCCc
Confidence 4557889999999887654
No 44
>d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}
Probab=79.42 E-value=1.7 Score=36.44 Aligned_cols=77 Identities=13% Similarity=0.112 Sum_probs=49.7
Q ss_pred ceEEEEecCCCCceEEEEEeeccccccccCCceEEEEEECCe-eccccceeccCCCccceeeeeeEeecCCceEEEEEcc
Q 006793 274 AIQYNLAVDAKLDYLIWFHFAEIDSSVTKAGQRVFDILVNDK-NVTRVDIFNSVGSFAAYSWHYVAKNLSSTELTVKLVP 352 (631)
Q Consensus 274 ~lt~~~~v~~~~~y~v~LhFaEi~~~~~~~~~R~F~V~in~~-~l~~~di~~~~g~~~~~~~~~~~l~ls~n~L~~~l~~ 352 (631)
...|.+++ |++.|.|.++|+|-. ..++.+.+. .+.. ..|.+. . .......++++|++.+..
T Consensus 64 ~~~f~v~v-PnG~Y~Vtv~~Gd~~---------~~~~~~eg~~~~~~-----~~g~~~--~-~~~~V~VtDG~L~l~ft~ 125 (146)
T d2o14a1 64 NNTFNVDL-PNGLYEVKVTLGNTA---------RASVAAEGVFQVIN-----MTGDGA--E-DTFQIPVTDGQLNLLVTE 125 (146)
T ss_dssp SCCEEEEC-CSEEEEEEEEESSCS---------EEEEEETTEEEEEE-----EESTTC--E-EEEEEEECSSEEEEEEEE
T ss_pred CceEEEEC-CCCeEEEEEEEecCC---------CccEEEeeEEeccc-----cCCccE--E-EEEEEEEECCeEEEEEec
Confidence 35788888 578999999999832 235667775 2222 122221 1 222345688999999865
Q ss_pred cc-hh-hhhhcccccccc
Q 006793 353 VV-GA-ALISGLENYALV 368 (631)
Q Consensus 353 ~~-~~-~~Ln~lEi~~l~ 368 (631)
.. +. |.||+|||-++.
T Consensus 126 ~~~G~~~~in~l~I~~~~ 143 (146)
T d2o14a1 126 GKAGTAFTLSALKIKKLS 143 (146)
T ss_dssp SSTTSCCEEEEEEEEEEE
T ss_pred CCCCCccEEEEEEEEecc
Confidence 54 33 889999998754
Done!