Query 006802
Match_columns 630
No_of_seqs 672 out of 3334
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 09:21:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006802.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006802hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 5.6E-44 1.9E-48 386.5 32.1 318 61-404 67-384 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 4E-43 1.4E-47 379.8 33.3 315 63-403 3-317 (437)
3 1wdy_A 2-5A-dependent ribonucl 100.0 9.7E-42 3.3E-46 345.6 30.2 264 119-394 4-283 (285)
4 3d9h_A CDNA FLJ77766, highly s 100.0 1.5E-40 5.3E-45 338.8 20.1 265 116-391 11-281 (285)
5 4g8k_A 2-5A-dependent ribonucl 100.0 3.7E-39 1.3E-43 336.5 30.6 289 75-392 26-329 (337)
6 2fo1_E LIN-12 protein; beta-ba 100.0 1.5E-40 5.1E-45 352.3 16.5 265 114-390 88-372 (373)
7 4g8k_A 2-5A-dependent ribonucl 100.0 7.4E-39 2.5E-43 334.2 28.8 265 117-392 22-301 (337)
8 3utm_A Tankyrase-1; tankyrase, 100.0 9.4E-39 3.2E-43 333.9 29.5 278 115-404 19-320 (351)
9 3ljn_A Hypothetical protein; a 100.0 1.2E-39 4E-44 344.0 16.1 267 110-390 10-315 (364)
10 2xai_A ASB-9, ankyrin repeat a 100.0 9.9E-39 3.4E-43 321.0 18.9 248 119-383 2-257 (261)
11 3utm_A Tankyrase-1; tankyrase, 100.0 1.1E-37 3.8E-42 325.8 26.4 289 73-390 23-335 (351)
12 1wdy_A 2-5A-dependent ribonucl 100.0 2.6E-37 8.8E-42 313.0 27.1 263 76-362 7-284 (285)
13 1yyh_A HN1;, notch 1, ankyrin 100.0 3.7E-38 1.3E-42 315.2 20.6 246 112-388 2-247 (253)
14 1yyh_A HN1;, notch 1, ankyrin 100.0 4.8E-38 1.6E-42 314.5 20.2 229 152-405 3-231 (253)
15 1oy3_D Transcription factor in 100.0 5.8E-38 2E-42 317.9 20.9 255 113-375 2-269 (282)
16 1k1a_A B-cell lymphoma 3-encod 100.0 6.8E-38 2.3E-42 309.9 19.4 233 152-388 2-240 (241)
17 3b7b_A Euchromatic histone-lys 100.0 1.4E-36 4.8E-41 300.0 25.7 221 112-377 3-223 (237)
18 3aji_A 26S proteasome non-ATPa 100.0 6.1E-37 2.1E-41 301.4 22.0 224 160-389 7-230 (231)
19 3b7b_A Euchromatic histone-lys 100.0 1.5E-36 5.3E-41 299.7 24.4 213 188-404 5-217 (237)
20 3ljn_A Hypothetical protein; a 100.0 4.3E-37 1.5E-41 324.3 20.4 231 152-390 13-270 (364)
21 1k1a_A B-cell lymphoma 3-encod 100.0 6.9E-37 2.3E-41 302.7 19.0 231 114-351 3-237 (241)
22 3aji_A 26S proteasome non-ATPa 100.0 2.7E-36 9.2E-41 296.8 22.7 228 117-356 3-230 (231)
23 3d9h_A CDNA FLJ77766, highly s 100.0 1.9E-36 6.6E-41 308.5 22.1 270 72-359 13-282 (285)
24 2xai_A ASB-9, ankyrin repeat a 100.0 2E-36 6.7E-41 304.3 21.6 222 158-390 2-223 (261)
25 2dzn_A Probable 26S proteasome 100.0 5.4E-36 1.8E-40 293.9 21.3 221 159-385 2-226 (228)
26 3eu9_A Huntingtin-interacting 100.0 9.3E-36 3.2E-40 293.8 22.8 233 153-391 3-237 (240)
27 1oy3_D Transcription factor in 100.0 1.3E-35 4.4E-40 300.6 19.7 249 152-404 2-265 (282)
28 3kea_A K1L; tropism, ANK repea 100.0 1.3E-35 4.6E-40 302.3 18.8 244 128-395 7-252 (285)
29 2fo1_E LIN-12 protein; beta-ba 100.0 3.4E-36 1.2E-40 318.7 14.7 264 122-404 68-353 (373)
30 4b93_B Ankyrin repeat domain-c 100.0 2.1E-36 7.1E-41 305.4 12.4 229 155-388 7-243 (269)
31 1s70_B 130 kDa myosin-binding 100.0 1.2E-35 4E-40 304.1 17.7 253 115-386 35-287 (299)
32 2dzn_A Probable 26S proteasome 100.0 4.5E-35 1.5E-39 287.3 21.1 220 120-351 2-226 (228)
33 4b93_B Ankyrin repeat domain-c 100.0 7.9E-36 2.7E-40 301.2 13.3 227 115-349 6-235 (269)
34 3eu9_A Huntingtin-interacting 100.0 2E-34 6.7E-39 284.3 22.4 234 113-357 2-236 (240)
35 2f8y_A Notch homolog 1, transl 100.0 1.3E-34 4.5E-39 283.1 20.6 218 170-392 2-219 (223)
36 2f8y_A Notch homolog 1, transl 100.0 6.6E-34 2.3E-38 278.1 18.7 216 131-357 2-217 (223)
37 3kea_A K1L; tropism, ANK repea 100.0 4.8E-34 1.6E-38 290.8 15.8 228 112-363 23-253 (285)
38 1s70_B 130 kDa myosin-binding 100.0 7.9E-34 2.7E-38 290.5 14.2 266 126-404 4-272 (299)
39 1sw6_A Regulatory protein SWI6 100.0 6.7E-34 2.3E-38 295.6 9.8 249 108-375 40-327 (327)
40 1ikn_D Protein (I-kappa-B-alph 100.0 1.3E-33 4.5E-38 278.9 11.4 219 114-338 2-227 (236)
41 1ikn_D Protein (I-kappa-B-alph 100.0 6.6E-34 2.3E-38 281.0 9.0 214 154-371 3-226 (236)
42 2rfa_A Transient receptor pote 100.0 3.4E-32 1.2E-36 267.7 20.1 210 158-392 2-225 (232)
43 3hra_A Ankyrin repeat family p 100.0 6.3E-32 2.2E-36 259.5 21.1 194 192-387 3-201 (201)
44 2rfa_A Transient receptor pote 100.0 5.2E-32 1.8E-36 266.4 20.2 212 119-359 2-225 (232)
45 3hra_A Ankyrin repeat family p 100.0 1.2E-30 4.1E-35 250.6 21.2 189 159-351 5-199 (201)
46 2pnn_A Transient receptor pote 100.0 1.4E-31 4.6E-36 270.6 13.2 215 152-392 6-262 (273)
47 2etb_A Transient receptor pote 100.0 2.3E-31 7.9E-36 266.1 12.9 164 224-390 39-247 (256)
48 2pnn_A Transient receptor pote 100.0 1.1E-31 3.7E-36 271.2 9.3 228 110-367 3-270 (273)
49 4gpm_A Engineered protein OR26 100.0 2.9E-30 1E-34 241.3 17.6 158 230-391 6-163 (169)
50 1sw6_A Regulatory protein SWI6 100.0 7.4E-32 2.5E-36 280.2 4.4 262 117-403 20-322 (327)
51 2etb_A Transient receptor pote 100.0 1.6E-30 5.4E-35 260.0 12.3 208 120-357 2-247 (256)
52 4gpm_A Engineered protein OR26 100.0 4E-29 1.4E-33 233.6 17.7 159 196-359 6-164 (169)
53 3jxi_A Vanilloid receptor-rela 100.0 3.5E-30 1.2E-34 258.0 10.6 164 226-392 44-253 (260)
54 3jxi_A Vanilloid receptor-rela 100.0 9.3E-30 3.2E-34 254.9 8.7 210 117-356 2-250 (260)
55 4hbd_A KN motif and ankyrin re 100.0 6.9E-29 2.4E-33 251.4 13.5 189 160-351 77-271 (276)
56 4hbd_A KN motif and ankyrin re 100.0 6.5E-29 2.2E-33 251.6 11.6 191 195-387 77-273 (276)
57 3v30_A DNA-binding protein rfx 100.0 4.3E-28 1.5E-32 227.0 14.8 164 229-395 3-166 (172)
58 3v30_A DNA-binding protein rfx 100.0 5.1E-28 1.7E-32 226.5 15.3 170 194-367 2-171 (172)
59 2rfm_A Putative ankyrin repeat 100.0 5.9E-28 2E-32 230.4 14.3 162 222-387 29-190 (192)
60 2aja_A Ankyrin repeat family p 99.9 1.9E-30 6.6E-35 273.1 -3.8 246 117-383 89-368 (376)
61 3v31_A Ankyrin repeat family A 99.9 1.7E-27 5.7E-32 221.8 14.7 161 227-391 2-162 (167)
62 2y1l_E Darpin-8.4; hydrolase-i 99.9 3.4E-27 1.2E-31 220.4 16.4 159 225-387 11-169 (169)
63 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.8E-27 6.1E-32 220.2 14.0 157 228-389 5-162 (162)
64 2rfm_A Putative ankyrin repeat 99.9 7.1E-27 2.4E-31 222.9 16.7 162 113-284 28-189 (192)
65 2vge_A RELA-associated inhibit 99.9 2E-29 6.7E-34 248.1 -2.7 188 154-348 16-206 (229)
66 1ihb_A P18-INK4C(INK6), cyclin 99.9 5.9E-27 2E-31 216.7 14.1 158 194-356 5-162 (162)
67 3twr_A Tankyrase-2; ankyrin re 99.9 2.9E-27 9.7E-32 219.8 11.3 160 225-388 5-164 (165)
68 1awc_B Protein (GA binding pro 99.9 2.2E-26 7.7E-31 211.0 15.9 150 229-383 3-152 (153)
69 3f6q_A Integrin-linked protein 99.9 8.4E-27 2.9E-31 219.8 13.4 165 227-394 4-168 (179)
70 3v31_A Ankyrin repeat family A 99.9 4.9E-26 1.7E-30 211.8 18.0 159 119-287 2-160 (167)
71 2y1l_E Darpin-8.4; hydrolase-i 99.9 6.9E-26 2.4E-30 211.5 18.3 160 116-285 10-169 (169)
72 3f6q_A Integrin-linked protein 99.9 1.6E-26 5.5E-31 217.9 14.0 166 194-363 5-170 (179)
73 2aja_A Ankyrin repeat family p 99.9 1.9E-28 6.4E-33 258.0 0.7 242 120-388 65-343 (376)
74 2vge_A RELA-associated inhibit 99.9 3.5E-28 1.2E-32 239.1 0.2 201 109-321 10-214 (229)
75 1awc_B Protein (GA binding pro 99.9 9.5E-26 3.2E-30 206.8 15.7 150 195-349 3-152 (153)
76 1bd8_A P19INK4D CDK4/6 inhibit 99.9 7.8E-26 2.7E-30 207.9 15.0 152 229-385 3-154 (156)
77 3twr_A Tankyrase-2; ankyrin re 99.9 1.5E-25 5.3E-30 208.0 16.7 160 156-320 5-164 (165)
78 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2E-25 6.8E-30 205.1 14.8 152 195-351 3-154 (156)
79 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.8E-25 9.7E-30 219.8 10.0 181 117-308 2-193 (239)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.2E-25 4E-30 222.5 7.0 206 156-371 2-225 (239)
81 1d9s_A Cyclin-dependent kinase 99.9 6.5E-24 2.2E-28 190.6 13.5 130 256-389 6-136 (136)
82 3t8k_A Uncharacterized protein 99.9 2.8E-24 9.7E-29 203.9 7.8 155 229-387 7-177 (186)
83 1bi7_B P16INK4A, MTS1, multipl 99.9 6.1E-24 2.1E-28 195.5 8.8 138 259-400 9-147 (156)
84 1bi7_B P16INK4A, MTS1, multipl 99.9 5.5E-23 1.9E-27 189.1 13.5 145 222-371 6-151 (156)
85 3t8k_A Uncharacterized protein 99.9 8.5E-24 2.9E-28 200.6 8.2 162 194-361 6-184 (186)
86 1d9s_A Cyclin-dependent kinase 99.9 8.8E-23 3E-27 183.2 12.9 133 111-253 3-136 (136)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.8E-22 6.1E-27 177.6 13.8 126 261-389 1-126 (126)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 1.6E-22 5.6E-27 181.4 12.0 126 259-387 11-136 (136)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.2E-21 4.1E-26 172.3 13.3 126 227-356 1-126 (126)
90 2jab_A H10-2-G3; HER2, darpin, 99.9 9.9E-22 3.4E-26 176.2 11.2 124 225-351 11-134 (136)
91 3c5r_A BARD-1, BRCA1-associate 99.9 2.4E-22 8.1E-27 180.4 5.5 129 257-388 5-133 (137)
92 3deo_A Signal recognition part 99.8 3.9E-21 1.3E-25 181.7 10.3 137 193-351 43-180 (183)
93 3ui2_A Signal recognition part 99.8 3.5E-21 1.2E-25 191.0 9.9 108 193-304 44-152 (244)
94 3c5r_A BARD-1, BRCA1-associate 99.8 1.3E-20 4.4E-25 169.0 11.4 127 189-318 5-131 (137)
95 3aaa_C Myotrophin, protein V-1 99.8 2.7E-20 9.3E-25 163.7 12.6 119 259-383 4-122 (123)
96 3deo_A Signal recognition part 99.8 5.8E-21 2E-25 180.5 8.6 139 157-317 42-180 (183)
97 3ehr_A Osteoclast-stimulating 99.8 5.9E-21 2E-25 186.2 8.6 137 256-394 67-203 (222)
98 3ui2_A Signal recognition part 99.8 1.2E-20 4.2E-25 187.0 10.9 110 227-339 44-153 (244)
99 1dcq_A PYK2-associated protein 99.8 2.9E-20 9.8E-25 188.0 13.6 127 263-391 131-265 (278)
100 2b0o_E UPLC1; arfgap, structur 99.8 2.8E-20 9.6E-25 190.3 11.8 121 195-317 152-280 (301)
101 2b0o_E UPLC1; arfgap, structur 99.8 3.3E-20 1.1E-24 189.7 11.4 146 155-309 147-299 (301)
102 3ehr_A Osteoclast-stimulating 99.8 1E-20 3.6E-25 184.4 6.3 136 225-364 70-206 (222)
103 3aaa_C Myotrophin, protein V-1 99.8 3.2E-20 1.1E-24 163.2 8.5 108 227-337 6-113 (123)
104 1dcq_A PYK2-associated protein 99.8 3E-19 1E-23 180.5 13.5 123 230-355 132-262 (278)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.8 6.5E-19 2.2E-23 146.7 9.8 93 295-389 1-93 (93)
106 3jue_A Arfgap with coiled-coil 99.8 1E-18 3.5E-23 183.0 10.4 123 262-387 199-324 (368)
107 3lvq_E ARF-GAP with SH3 domain 99.8 2.5E-18 8.5E-23 188.5 13.2 133 230-372 134-275 (497)
108 3jue_A Arfgap with coiled-coil 99.8 2.4E-18 8.2E-23 180.3 11.8 147 225-374 196-347 (368)
109 2l6b_A NR1C; ankyrin, consensu 99.7 2.4E-18 8.1E-23 149.2 9.5 109 257-368 4-112 (115)
110 3lvq_E ARF-GAP with SH3 domain 99.7 3.8E-18 1.3E-22 187.0 13.0 129 263-393 133-269 (497)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.7 5.7E-18 1.9E-22 140.9 10.1 93 261-356 1-93 (93)
112 2l6b_A NR1C; ankyrin, consensu 99.7 7.1E-18 2.4E-22 146.1 7.4 107 292-400 5-111 (115)
113 2zgd_A 3 repeat synthetic anky 99.6 6E-16 2.1E-20 133.0 7.8 90 292-383 20-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.6 3.3E-15 1.1E-19 128.3 8.7 90 258-349 20-109 (110)
115 3rko_J NADH-quinone oxidoreduc 57.9 22 0.00076 32.1 6.7 17 496-512 4-20 (184)
116 2l2t_A Receptor tyrosine-prote 54.5 6.2 0.00021 26.5 1.8 28 560-587 7-34 (44)
117 2ks1_B Epidermal growth factor 44.2 5.1 0.00017 27.0 0.1 27 561-587 9-35 (44)
118 3gvo_A Pumilio 2, pumilio homo 43.1 22 0.00074 35.8 4.8 164 115-283 68-238 (351)
119 2knc_B Integrin beta-3; transm 42.4 17 0.00058 27.9 2.9 27 561-587 9-35 (79)
120 3k49_A MRNA-binding protein PU 37.3 60 0.002 32.8 7.1 227 120-351 42-285 (369)
121 3gvo_A Pumilio 2, pumilio homo 36.2 20 0.00069 36.1 3.2 221 119-344 36-267 (351)
122 4ev6_A Magnesium transport pro 33.9 1.7E+02 0.0059 28.9 9.8 42 531-572 277-321 (339)
123 3k49_A MRNA-binding protein PU 30.2 63 0.0022 32.6 5.8 153 116-273 74-233 (369)
124 2knc_A Integrin alpha-IIB; tra 28.5 68 0.0023 22.5 3.8 23 560-582 10-32 (54)
125 2l8s_A Integrin alpha-1; trans 28.3 70 0.0024 22.4 3.8 23 560-582 7-29 (54)
126 2iub_A CORA, divalent cation t 26.4 1.7E+02 0.0058 29.3 8.3 41 531-571 301-344 (363)
127 2k1k_A Ephrin type-A receptor 25.6 46 0.0016 21.5 2.4 24 564-587 12-35 (38)
128 4a01_A Proton pyrophosphatase; 25.0 1.9E+02 0.0067 31.7 8.5 58 529-586 357-425 (766)
129 2jwa_A Receptor tyrosine-prote 24.6 31 0.001 23.1 1.4 11 561-571 10-20 (44)
130 3mkq_B Coatomer subunit alpha; 24.4 3.7E+02 0.013 23.8 10.8 131 121-284 9-140 (177)
131 2k1a_A Integrin alpha-IIB; sin 24.3 99 0.0034 20.4 3.8 24 560-583 8-31 (42)
132 3mkq_B Coatomer subunit alpha; 23.1 3.1E+02 0.01 24.4 8.2 100 124-250 41-140 (177)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=5.6e-44 Score=386.51 Aligned_cols=318 Identities=27% Similarity=0.361 Sum_probs=236.7
Q ss_pred cccccccccCCCccccccccchhhhhhhhhhhhHHHHHHHhhhcCCCccccCCCCCCCCCChHHHHHHHcCCHHHHHHHH
Q 006802 61 SFHGVTIDKQPSTRGVMEKQKSFRGFIEKQKSFRVVMERQLSFIGGGERKKNKDSPGKRGDLQLHLAARAGNLSRVMEIL 140 (630)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll 140 (630)
..+|++++.++..+.++++.+...|+.+..+.+. +.+.+++..+..|.||||+|++.|+.+++++|+
T Consensus 67 l~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-------------~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 133 (437)
T 1n11_A 67 LQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLL-------------ENNANPNLATTAGHTPLHIAAREGHVETVLALL 133 (437)
T ss_dssp HHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHH-------------HHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH-------------hCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 3455566666666666666666666555444221 123455566666666666666666666666666
Q ss_pred HhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc
Q 006802 141 QSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNL 220 (630)
Q Consensus 141 ~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~ 220 (630)
+.+.. .+..+..|.||||+|+..|+.+++++|+++ +.+.+..+..|.||||+|+..|+.+++++|++.+.+
T Consensus 134 ~~~~~------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~- 204 (437)
T 1n11_A 134 EKEAS------QACMTKKGFTPLHVAAKYGKVRVAELLLER--DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS- 204 (437)
T ss_dssp HTTCC------SCCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCC-
T ss_pred hCCCC------CcCCCCCCCCHHHHHHHcCCHHHHHHHHhC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-
Confidence 65442 344566777777777777777777777776 445566677778888888888888888888877766
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchh
Q 006802 221 VMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTAL 300 (630)
Q Consensus 221 ~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L 300 (630)
....+..|.||||+|+..|+.+++++|++.|.+. +..+..|.||||+|+..|+.+++++|++.+++.... +..|.|||
T Consensus 205 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~g~t~L 282 (437)
T 1n11_A 205 PHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSA-NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLG-NKSGLTPL 282 (437)
T ss_dssp SCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCC-CTTCCCHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCC-CCCCCCHH
Confidence 3455667788888888888888888888887775 566777888888888888888888888888777654 77888888
Q ss_pred hhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHH
Q 006802 301 HMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELF 380 (630)
Q Consensus 301 h~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv 380 (630)
|+|+..|+.+++++|++.+.++ +.+|..|+||||+|+..|+.++|++|++ .|+++|.+|..|.||||+|+..|+.+++
T Consensus 283 ~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~gad~n~~~~~g~t~L~~A~~~g~~~iv 360 (437)
T 1n11_A 283 HLVAQEGHVPVADVLIKHGVMV-DATTRMGYTPLHVASHYGNIKLVKFLLQ-HQADVNAKTKLGYSPLHQAAQQGHTDIV 360 (437)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCT-TCCCSSCCCHHHHHHHSSCSHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCccC-CCCCCCCCCHHHHHHHcCcHHHHHHHHh-cCCCCCCCCCCCCCHHHHHHHCChHHHH
Confidence 8888888888888888887765 7788888888888888888888888888 7888888888888888888888888888
Q ss_pred HHHHHcCCCCcccCCCCCchHHHH
Q 006802 381 SLLKEAGAAHSKDHGKPPSATKQL 404 (630)
Q Consensus 381 ~~L~~~ga~~~~~~~~~~~~~~~l 404 (630)
++|+++|+++...+..+.++....
T Consensus 361 ~~Ll~~ga~~~~~~~~g~t~l~~A 384 (437)
T 1n11_A 361 TLLLKNGASPNEVSSDGTTPLAIA 384 (437)
T ss_dssp HHHHHTTCCSCCCCSSSCCHHHHH
T ss_pred HHHHHCcCCCCCCCCCCCCHHHHH
Confidence 888888888888777777776553
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4e-43 Score=379.77 Aligned_cols=315 Identities=27% Similarity=0.359 Sum_probs=248.1
Q ss_pred cccccccCCCccccccccchhhhhhhhhhhhHHHHHHHhhhcCCCccccCCCCCCCCCChHHHHHHHcCCHHHHHHHHHh
Q 006802 63 HGVTIDKQPSTRGVMEKQKSFRGFIEKQKSFRVVMERQLSFIGGGERKKNKDSPGKRGDLQLHLAARAGNLSRVMEILQS 142 (630)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~ 142 (630)
.|++++..+..|.++++.+...|.++..+.+. +.+.+++..+..|.||||+||+.|+.++|++|++.
T Consensus 3 ~g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll-------------~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~ 69 (437)
T 1n11_A 3 PGISGGGGGESGLTPLHVASFMGHLPIVKNLL-------------QRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQN 69 (437)
T ss_dssp ------------CCHHHHHHHHTCHHHHHHHH-------------HTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCCccccCCCCCCHHHHHHHCCCHHHHHHHH-------------HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 56777777888888888888888877766432 23567777888888888888888888888888887
Q ss_pred cChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc
Q 006802 143 CDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVM 222 (630)
Q Consensus 143 ~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~ 222 (630)
+.+ ++.++..|.||||+|+..|+.++|++|+++ +.+.+..+..|.||||+|+..|+.+++++|++.+... .
T Consensus 70 g~~------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~ 140 (437)
T 1n11_A 70 KAK------VNAKAKDDQTPLHCAARIGHTNMVKLLLEN--NANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQ-A 140 (437)
T ss_dssp TCC------SSCCCTTSCCHHHHHHHHTCHHHHHHHHHH--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-C
T ss_pred CCC------CCCCCCCCCCHHHHHHHCCCHHHHHHHHhC--CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-c
Confidence 654 567788888888888888888888888887 4566777888888888888888888888888887763 4
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhh
Q 006802 223 TTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHM 302 (630)
Q Consensus 223 ~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~ 302 (630)
..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++.+.++... +..|.||||+
T Consensus 141 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~ 218 (437)
T 1n11_A 141 CMTKKGFTPLHVAAKYGKVRVAELLLERDAHP-NAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSP-AWNGYTPLHI 218 (437)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCC-CTTCCCHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCc-CCCCCCHHHH
Confidence 56677888888888888888888888888876 667788888888888888888888888888877654 7788888888
Q ss_pred hccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHH
Q 006802 303 AVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSL 382 (630)
Q Consensus 303 Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~ 382 (630)
|+..|+.+++++|++.+.++ +..|..|.||||+|+..|+.+++++|++ .|++++..|..|.||||+|+..|+.+++++
T Consensus 219 A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 296 (437)
T 1n11_A 219 AAKQNQVEVARSLLQYGGSA-NAESVQGVTPLHLAAQEGHAEMVALLLS-KQANGNLGNKSGLTPLHLVAQEGHVPVADV 296 (437)
T ss_dssp HHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHT-TTCCTTCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHh-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 88888888888888887765 7778888888888888888888888888 788888888888888888888888888888
Q ss_pred HHHcCCCCcccCCCCCchHHH
Q 006802 383 LKEAGAAHSKDHGKPPSATKQ 403 (630)
Q Consensus 383 L~~~ga~~~~~~~~~~~~~~~ 403 (630)
|+++|++....+..+.++...
T Consensus 297 Ll~~g~~~~~~~~~g~t~L~~ 317 (437)
T 1n11_A 297 LIKHGVMVDATTRMGYTPLHV 317 (437)
T ss_dssp HHHHTCCTTCCCSSCCCHHHH
T ss_pred HHhCCccCCCCCCCCCCHHHH
Confidence 888888887777777666543
No 3
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=9.7e-42 Score=345.58 Aligned_cols=264 Identities=28% Similarity=0.383 Sum_probs=242.3
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcC-CCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcH
Q 006802 119 RGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKK-NQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDS 197 (630)
Q Consensus 119 ~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~-n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~ 197 (630)
+|.||||.|++.|+.++|++|++.+.+ ++.. +..|.||||+|+..|+.+++++|+++ +.+++..+.+|.||
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~ 75 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGGAN------VNFQEEEGGWTPLHNAVQMSREDIVELLLRH--GADPVLRKKNGATP 75 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCC------cccccCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCH
Confidence 578999999999999999999998764 3444 78899999999999999999999998 56677788999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhh----------ccCCCcHHH
Q 006802 198 FHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIA----------RNNGKTVLH 267 (630)
Q Consensus 198 Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~----------d~~g~tpLh 267 (630)
||+|+..|+.+++++|++.+.+ .+..|..|.||||+|+..|+.+++++|+++|+++ +.. +..|.||||
T Consensus 76 L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~~~~~~~~~~g~t~L~ 153 (285)
T 1wdy_A 76 FLLAAIAGSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV-NLRRKTKEDQERLRKGGATALM 153 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCCCHHHHHTTCCCCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCc-ccccccHHHHHhhccCCCcHHH
Confidence 9999999999999999999988 4567899999999999999999999999999887 333 778999999
Q ss_pred HHHHcCCHHHHHHHHhC-CCCCCcccCCCCCchhhhhccCCC----HHHHHHhhcCCCCcccccCCCCChHHHHHHHhCc
Q 006802 268 SAARMGHLEVVKALVSK-DPSTGFRTDKKGQTALHMAVKGQN----EDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGR 342 (630)
Q Consensus 268 ~Aa~~g~~~iv~~Ll~~-~~~~~~~~d~~g~t~Lh~Aa~~g~----~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~ 342 (630)
.|+..|+.+++++|++. +.++... |..|.||||+|+..++ .+++++|++.+.++ +.+|..|+||||+|+..|+
T Consensus 154 ~A~~~~~~~~v~~Ll~~~~~~~~~~-~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~ 231 (285)
T 1wdy_A 154 DAAEKGHVEVLKILLDEMGADVNAC-DNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGERGKTPLILAVEKKH 231 (285)
T ss_dssp HHHHHTCHHHHHHHHHTSCCCTTCC-CTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCS-SCCCTTSCCHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHhcCCCCCcc-CCCCCCHHHHHHHccccchHHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCC
Confidence 99999999999999998 7776654 8999999999999999 89999999998876 8999999999999999999
Q ss_pred HHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC
Q 006802 343 TQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDH 394 (630)
Q Consensus 343 ~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~~~~~~ 394 (630)
.+++++|++..|++++.+|..|.||||+|+..++.+++++|+++|+++...+
T Consensus 232 ~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d 283 (285)
T 1wdy_A 232 LGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283 (285)
T ss_dssp HHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred HHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCccc
Confidence 9999999987899999999999999999999999999999999999987543
No 4
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=338.82 Aligned_cols=265 Identities=22% Similarity=0.288 Sum_probs=208.9
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHhcChhh-----hhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccC
Q 006802 116 PGKRGDLQLHLAARAGNLSRVMEILQSCDANE-----AKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIP 190 (630)
Q Consensus 116 ~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~-----~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~ 190 (630)
....|.|+||+||..|+.+.+..++...+... ....++..|..|+||||+|+..|+.++|++|++. +.+++..
T Consensus 11 ~~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~ 88 (285)
T 3d9h_A 11 SSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQ--GWAVNII 88 (285)
T ss_dssp -------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHT--TCCSCEE
T ss_pred cchHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCc
Confidence 45679999999999999888888776543210 0122567899999999999999999999999997 4667888
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHH
Q 006802 191 ARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAA 270 (630)
Q Consensus 191 ~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa 270 (630)
+.+|.||||+|+..|+.+++++|++.+.+ .+..|..|.||||+|+..|+.+++++|++.|+++. .+.+|.||||+|+
T Consensus 89 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~ 165 (285)
T 3d9h_A 89 TADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLASPIHEAA 165 (285)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTSCHHHHHH
T ss_pred CCCCCCHHHHHHHCCcHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC--CCCCCCCHHHHHH
Confidence 99999999999999999999999999887 56778999999999999999999999999998863 3556999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHh
Q 006802 271 RMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLL 350 (630)
Q Consensus 271 ~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll 350 (630)
..|+.+++++|++.++++... |..|.||||+|+..|+.+++++|++.++++ + .|..|+||||+|+..|+.+++++|+
T Consensus 166 ~~g~~~~v~~Ll~~g~~~~~~-d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll 242 (285)
T 3d9h_A 166 RRGHVECVNSLIAYGGNIDHK-ISHLGTPLYLACENQQRACVKKLLESGADV-N-QGKGQDSPLHAVVRTASEELACLLM 242 (285)
T ss_dssp HHTCHHHHHHHHHTTCCTTCC-BTTTBCHHHHHHHTTCHHHHHHHHHTTCCT-T-CCBTTBCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCc-CCCCCCHHHHHHHcCcHHHHHHHHHCCCCC-C-CCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 999999999999999998765 999999999999999999999999998876 5 4889999999999999999999999
Q ss_pred cccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCc
Q 006802 351 SIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEA-GAAHS 391 (630)
Q Consensus 351 ~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~-ga~~~ 391 (630)
+ .|++++.+|..|+||||+|+ ++.+++++|+++ |++..
T Consensus 243 ~-~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l~ 281 (285)
T 3d9h_A 243 D-FGADTQAKNAEGKRPVELVP--PESPLAQLFLEREGASLP 281 (285)
T ss_dssp H-TTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC-----
T ss_pred H-CCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccCCC
Confidence 9 89999999999999999999 567899999998 66643
No 5
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=3.7e-39 Score=336.48 Aligned_cols=289 Identities=21% Similarity=0.249 Sum_probs=244.8
Q ss_pred ccccccchhhhhhhhhhhhHHHHHHHhhhcCCCccccCCCCCCC-CCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhh
Q 006802 75 GVMEKQKSFRGFIEKQKSFRVVMERQLSFIGGGERKKNKDSPGK-RGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLS 153 (630)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~ 153 (630)
.++++.+...|.++..+.+. +.+.+++.++. .|.||||+||..|+.++|++||+.+.. ++
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL-------------~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~------~~ 86 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLL-------------EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD------PV 86 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHH-------------HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TT
T ss_pred ChHHHHHHHcCCHHHHHHHH-------------HCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCc------hh
Confidence 46677777777777666332 24577777765 589999999999999999999998764 56
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc---------ccC
Q 006802 154 KKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLV---------MTT 224 (630)
Q Consensus 154 ~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~---------~~~ 224 (630)
.++..+.+|++.++..++.+++..+++. ..+++..+..|.||||+|+..|+.+++++|++.+.++. ...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~ 164 (337)
T 4g8k_A 87 LRKKNGATPFILAAIAGSVKLLKLFLSK--GADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERL 164 (337)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHTT--TCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----C
T ss_pred hhccCCCchhHHHHhcccchhhHHhhhc--cchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccc
Confidence 7788899999999999999999999887 55677888999999999999999999999999887643 234
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhc-CCchhhhhccCCCcHHHHHHHcCC----HHHHHHHHhCCCCCCcccCCCCCch
Q 006802 225 DLSCSTALHTAAAQGHIDVVNFLLEI-DSNLAKIARNNGKTVLHSAARMGH----LEVVKALVSKDPSTGFRTDKKGQTA 299 (630)
Q Consensus 225 d~~g~tpL~~Aa~~g~~e~v~~LL~~-~~~~~~~~d~~g~tpLh~Aa~~g~----~~iv~~Ll~~~~~~~~~~d~~g~t~ 299 (630)
+..|.||||+|+..|+.+++++|+++ |+++ +..|..|.|++|.++..++ .+++++|++.+++++.. |..|+||
T Consensus 165 ~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~-n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~-d~~g~t~ 242 (337)
T 4g8k_A 165 RKGGATALMDAAEKGHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVR-GERGKTP 242 (337)
T ss_dssp TTCSCCHHHHHHHHTCHHHHHHHHHHSCCCT-TCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCC-CGGGCCH
T ss_pred cCCCCcHHHHHHHCCCHHHHHHHHhccCCCc-CccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCc-CCCCCCH
Confidence 56789999999999999999999965 7776 7788999999998886554 46889999999998765 8999999
Q ss_pred hhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHH
Q 006802 300 LHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTEL 379 (630)
Q Consensus 300 Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~i 379 (630)
||+|+..|+.++++.|++.....++.+|.+|+||||+|++.|+.++|++|++ .|+++|.. +||++|+..++.++
T Consensus 243 L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~-~GAd~n~~-----~~L~~A~~~~~~~i 316 (337)
T 4g8k_A 243 LILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCK-RGASTDCG-----DLVMTARRNYDHSL 316 (337)
T ss_dssp HHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHT-TSCSSTTC-----CHHHHHHHTTCHHH
T ss_pred HHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCC-----CHHHHHHHcCCHHH
Confidence 9999999999999999987665669999999999999999999999999999 89988754 59999999999999
Q ss_pred HHHHHHcCCCCcc
Q 006802 380 FSLLKEAGAAHSK 392 (630)
Q Consensus 380 v~~L~~~ga~~~~ 392 (630)
+++|+++||+++.
T Consensus 317 v~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 317 VKVLLSHGAKEDF 329 (337)
T ss_dssp HHHHHHTTCCC--
T ss_pred HHHHHHCcCCCCC
Confidence 9999999998764
No 6
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.5e-40 Score=352.29 Aligned_cols=265 Identities=20% Similarity=0.265 Sum_probs=229.5
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCC-CCCCcHHHHHHHhCCHHHHHHHHhc------CCccc
Q 006802 114 DSPGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKN-QEGETPLYVAAESGHALIVEEMLQH------MNLET 186 (630)
Q Consensus 114 ~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n-~~g~TpLh~Aa~~g~~eiv~~LL~~------~~~~~ 186 (630)
..++..|.||||.||..|+ ++++.|+.. .++..| ..|.||||+|+..|+.+++++|+.. ..+.+
T Consensus 88 ~~~~~~g~t~L~~Aa~~~~-~~~~~L~~~--------~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~ 158 (373)
T 2fo1_E 88 TEPEPESPIKLHTEAAGSY-AITEPITRE--------SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD 158 (373)
T ss_dssp ------CCCHHHHHHHSSS-CCCSCCSTT--------TTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCC
T ss_pred cCCCCCCccHHHHHhcCCc-hHHHHhccc--------cccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCC
Confidence 4568899999999999554 777776532 256677 7899999999999999999888731 12567
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcC---CchhhhhccCCC
Q 006802 187 ASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEID---SNLAKIARNNGK 263 (630)
Q Consensus 187 ~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~---~~~~~~~d~~g~ 263 (630)
++..|.+|.||||+|+..|+.+++++|++.+++ ++..|..|.||||+|+..|+.+++++|++.+ .++ +..|.+|.
T Consensus 159 vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~d~~g~ 236 (373)
T 2fo1_E 159 VNAMDCDENTPLMLAVLARRRRLVAYLMKAGAD-PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDI-EELDRNGM 236 (373)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT-SCCCTTSC
T ss_pred CcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCC-CcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccCh-hhcCCCCC
Confidence 788899999999999999999999999999988 4567889999999999999999999999987 344 66789999
Q ss_pred cHHHHHHHcC---CHHHHHHHHhCCCCCCc-------ccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChH
Q 006802 264 TVLHSAARMG---HLEVVKALVSKDPSTGF-------RTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTA 333 (630)
Q Consensus 264 tpLh~Aa~~g---~~~iv~~Ll~~~~~~~~-------~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~Tp 333 (630)
||||+|+..| +.+++++|++.++++.. ..|..|.||||+|+..|+.+++++|++.++..++.+|.+|+||
T Consensus 237 t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~Tp 316 (373)
T 2fo1_E 237 TALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTP 316 (373)
T ss_dssp CHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCH
T ss_pred CHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCH
Confidence 9999999998 89999999999998765 2467899999999999999999999998755669999999999
Q ss_pred HHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Q 006802 334 LHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAH 390 (630)
Q Consensus 334 Lh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~~ 390 (630)
||+|+..|+.++|++|++ .|++++.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus 317 L~~A~~~g~~~iv~~Ll~-~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 317 IMLAAQEGRIEVVMYLIQ-QGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp HHHHHHHTCHHHHHHHHH-TTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred HHHHHHcCCHHHHHHHHH-cCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 999999999999999999 89999999999999999999999999999999998863
No 7
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=7.4e-39 Score=334.20 Aligned_cols=265 Identities=28% Similarity=0.368 Sum_probs=235.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCC-CCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCC
Q 006802 117 GKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQ-EGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGY 195 (630)
Q Consensus 117 ~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~-~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~ 195 (630)
+..|+|+||.||+.|+.++|++||+.|.+ ++.++. .|+||||+|+..|+.++|++||++ +..++..+..+.
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL~~Gad------vn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~--ga~~~~~~~~~~ 93 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLLEGGAN------VNFQEEEGGWTPLHNAVQMSREDIVELLLRH--GADPVLRKKNGA 93 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTCC------TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCC
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCC------CCccCCCCCcCHHHHHHHcCCHHHHHHHHHc--CCchhhhccCCC
Confidence 44578999999999999999999999875 455554 599999999999999999999998 567788899999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchh---------hhhccCCCcHH
Q 006802 196 DSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLA---------KIARNNGKTVL 266 (630)
Q Consensus 196 t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~---------~~~d~~g~tpL 266 (630)
++++.++..++..++..+++.+.+ .+..|..|.||||+|+..|+.+++++|+++|+++. ...+..|.|||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L 172 (337)
T 4g8k_A 94 TPFILAAIAGSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATAL 172 (337)
T ss_dssp CHHHHHHHHTCHHHHHHHHTTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHH
T ss_pred chhHHHHhcccchhhHHhhhccch-hhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHH
Confidence 999999999999999999999888 56789999999999999999999999999998762 22355799999
Q ss_pred HHHHHcCCHHHHHHHHh-CCCCCCcccCCCCCchhhhhccCCC----HHHHHHhhcCCCCcccccCCCCChHHHHHHHhC
Q 006802 267 HSAARMGHLEVVKALVS-KDPSTGFRTDKKGQTALHMAVKGQN----EDIVLELIRPDPSVLKLEDNKGNTALHIAIKKG 341 (630)
Q Consensus 267 h~Aa~~g~~~iv~~Ll~-~~~~~~~~~d~~g~t~Lh~Aa~~g~----~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g 341 (630)
|+|+..|+.++|++|++ .+.+++.. |..|.|+||.++..+. ..++++|++.++++ |.+|.+|+||||+|+..|
T Consensus 173 ~~A~~~g~~~~v~~LL~~~gad~n~~-d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~-n~~d~~g~t~L~~a~~~~ 250 (337)
T 4g8k_A 173 MDAAEKGHVEVLKILLDEMGADVNAC-DNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGERGKTPLILAVEKK 250 (337)
T ss_dssp HHHHHHTCHHHHHHHHHHSCCCTTCC-CTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCT-TCCCGGGCCHHHHHHHTT
T ss_pred HHHHHCCCHHHHHHHHhccCCCcCcc-CCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhh
Confidence 99999999999999996 47777654 9999999998765433 45788899998876 899999999999999999
Q ss_pred cHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Q 006802 342 RTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSK 392 (630)
Q Consensus 342 ~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~~~~ 392 (630)
+.++++.|++..|+++|.+|..|+||||+|+..|+.+++++|+++||+++.
T Consensus 251 ~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~ 301 (337)
T 4g8k_A 251 HLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 301 (337)
T ss_dssp CHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT
T ss_pred hhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 999999999877999999999999999999999999999999999998754
No 8
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=9.4e-39 Score=333.93 Aligned_cols=278 Identities=26% Similarity=0.304 Sum_probs=248.0
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCC
Q 006802 115 SPGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNG 194 (630)
Q Consensus 115 ~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g 194 (630)
..+..|.|+||.||+.|+.+.|+.|+.... ..++.+|..|.||||+|+..|+.++|++|+++ +.+++..+..|
T Consensus 19 ~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~-----~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g 91 (351)
T 3utm_A 19 LTGEYKKDELLEAARSGNEEKLMALLTPLN-----VNCHASDGRKSTPLHLAAGYNRVRIVQLLLQH--GADVHAKDKGG 91 (351)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHCCTTT-----TTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTC
T ss_pred eeccccchhHHHHHHcCCHHHHHHHHHhcC-----CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCC
Confidence 345667899999999999999999997643 23678899999999999999999999999998 56778889999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHH-----
Q 006802 195 YDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSA----- 269 (630)
Q Consensus 195 ~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~A----- 269 (630)
.||||+|+..|+.+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|+++|+++ +..+..|.+|+|.|
T Consensus 92 ~t~L~~A~~~g~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~~~l~~a~~~~~ 169 (351)
T 3utm_A 92 LVPLHNACSYGHYEVTELLLKHGAC-VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADP-TLVNCHGKSAVDMAPTPEL 169 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCSSHHH
T ss_pred CcHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCcchHHHhhhhh
Confidence 9999999999999999999999888 4567889999999999999999999999999987 67788899987765
Q ss_pred ----------------HHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccC---CCHHHHHHhhcCCCCcccccCCCC
Q 006802 270 ----------------ARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKG---QNEDIVLELIRPDPSVLKLEDNKG 330 (630)
Q Consensus 270 ----------------a~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~---g~~~iv~~Ll~~~~~~~n~~d~~G 330 (630)
+..++.+.+..++........ .+..|.||||+|+.. +..+++++|++.+.++ +.+|.+|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~-~~~~~~g 247 (351)
T 3utm_A 170 RERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFK-QPQSHETALHCAVASLHPKRKQVAELLLRKGANV-NEKNKDF 247 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCC-CTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCT-TCCCTTC
T ss_pred HHHHHhhhcccHHHHHHHhccHHHHHHHHHhhccccc-CCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCc-CCcCCCC
Confidence 566777788888877654443 478899999999999 5589999999999876 8899999
Q ss_pred ChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHH
Q 006802 331 NTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSATKQL 404 (630)
Q Consensus 331 ~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~~~~~~~~~~~~~~~l 404 (630)
+||||+|+..|+.+++++|++ .|+++|.+|..|+||||+|+..|+.+++++|+++|+++...+..+.++....
T Consensus 248 ~t~L~~A~~~g~~~~v~~Ll~-~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a 320 (351)
T 3utm_A 248 MTPLHVAAERAHNDVMEVLHK-HGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG 320 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHS
T ss_pred CCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhh
Confidence 999999999999999999999 8999999999999999999999999999999999999999988888877654
No 9
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.2e-39 Score=344.01 Aligned_cols=267 Identities=17% Similarity=0.198 Sum_probs=230.6
Q ss_pred ccCCCCCCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCcccccc
Q 006802 110 KKNKDSPGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASI 189 (630)
Q Consensus 110 ~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~ 189 (630)
+.+.+..|..|.||||+||..|+.++|++|++.+.+ ++.+|..|.||||+|+..|+.++|++|++++. ..
T Consensus 10 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~----~~ 79 (364)
T 3ljn_A 10 KLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVS------PTIQNRFGCTALHLACKFGCVDTAKYLASVGE----VH 79 (364)
T ss_dssp ------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCC----CC
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCC----Cc
Confidence 456677889999999999999999999999998764 67889999999999999999999999999843 33
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhc----CCCccc----------------cCCCCCChHHHHHHHcC--CHHHHHHH
Q 006802 190 PARNGYDSFHVAAKQGHLEVLKELLGE----FPNLVM----------------TTDLSCSTALHTAAAQG--HIDVVNFL 247 (630)
Q Consensus 190 ~~~~g~t~Lh~A~~~g~~eiv~~Ll~~----~~~~~~----------------~~d~~g~tpL~~Aa~~g--~~e~v~~L 247 (630)
.+.+|.||||+|+..|+.+++++|++. +..... ..|..|.||||+|+..| +.+++++|
T Consensus 80 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~L 159 (364)
T 3ljn_A 80 SLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKIL 159 (364)
T ss_dssp CCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHH
Confidence 445899999999999999999999998 554221 16778999999999999 99999999
Q ss_pred HhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCC-----CCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCc
Q 006802 248 LEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPS-----TGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSV 322 (630)
Q Consensus 248 L~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~-----~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~ 322 (630)
+++|+++ +..|..|.||||+|+..|+.+++++|++.+++ ++. .|..|.||||+|+..|+.+++++|++.++++
T Consensus 160 l~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~ 237 (364)
T 3ljn_A 160 VQLGASP-TAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDY-ANKQGNSHLHWAILINWEDVAMRFVEMGIDV 237 (364)
T ss_dssp HHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTC-CCTTCCCTTHHHHTTTCHHHHHHHHTTTCCT
T ss_pred HHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999987 77899999999999999999999999999888 554 4899999999999999999999999999886
Q ss_pred ccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCccc------------ccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Q 006802 323 LKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNS------------LNKAGESPLDVAEKLGNTELFSLLKEAGAAH 390 (630)
Q Consensus 323 ~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~------------~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~~ 390 (630)
+.+|.+|+||||+|+..|+.+++++|++ .|++++. .+..|.||++.|+..++.+.+..|+..+++.
T Consensus 238 -~~~d~~g~tpL~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~~~~~~ 315 (364)
T 3ljn_A 238 -NMEDNEHTVPLYLSVRAAMVLLTKELLQ-KTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDE 315 (364)
T ss_dssp -TCCCTTSCCHHHHHHHTCCHHHHHHHHH-HSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHHHHHHH
T ss_pred -CCCCCCCCCHHHHHHHhChHHHHHHHHH-cCCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999 5665433 5678899999999998877777777666553
No 10
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=9.9e-39 Score=321.05 Aligned_cols=248 Identities=17% Similarity=0.181 Sum_probs=219.5
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHH
Q 006802 119 RGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSF 198 (630)
Q Consensus 119 ~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~L 198 (630)
+|.||||.||..|+.+++++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++ +.+++..+..|.|||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L 73 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWA------VNIITADHVSPLHEACLGGHLSCVKILLKH--GAQVNGVTADWHTPL 73 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC------SSCCCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHH
Confidence 589999999999999999999998654 678899999999999999999999999998 567788899999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHH
Q 006802 199 HVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVV 278 (630)
Q Consensus 199 h~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv 278 (630)
|+|+..|+.+++++|++.+++.. .+..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v 150 (261)
T 2xai_A 74 FNACVSGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQRACV 150 (261)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHhCCHHHH
Confidence 99999999999999999998854 3556999999999999999999999999987 77899999999999999999999
Q ss_pred HHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCC---
Q 006802 279 KALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGI--- 355 (630)
Q Consensus 279 ~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~--- 355 (630)
++|++.+++++. +..|.||||+|+..++.+++++|++.++++ +.+|.+|+||||+|+..+ +++++|++ .+.
T Consensus 151 ~~Ll~~g~~~~~--~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~-~~~d~~g~tpl~~A~~~~--~~~~~ll~-~~~~~~ 224 (261)
T 2xai_A 151 KKLLESGADVNQ--GKGQDSPLHAVARTASEELACLLMDFGADT-QAKNAEGKRPVELVPPES--PLAQLFLE-REGPPS 224 (261)
T ss_dssp HHHHHHTCCTTC--CBTTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCGGGGSCTTC--THHHHHHH-C-CCCC
T ss_pred HHHHHcCCCCCC--CCCCCChHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCChhhhccccc--cHHHHHHh-ccCCcc
Confidence 999999999873 889999999999999999999999998876 899999999999999665 48888888 443
Q ss_pred -----CcccccCCCCCHHHHHHHcCCHHHHHHH
Q 006802 356 -----DVNSLNKAGESPLDVAEKLGNTELFSLL 383 (630)
Q Consensus 356 -----~in~~n~~G~TpL~~A~~~~~~~iv~~L 383 (630)
+++.+|..|.||+|.|.+...++.++-+
T Consensus 225 l~~~~~~~~r~~~g~t~l~~~~~~~~p~~l~~~ 257 (261)
T 2xai_A 225 LMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQF 257 (261)
T ss_dssp HHHHHHHHHHTTSCTTCGGGGGGSSSCHHHHHH
T ss_pred HHHHHHHHHHHHhchhccccCcccCCcHHHHHH
Confidence 4667899999999999987766655443
No 11
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.1e-37 Score=325.80 Aligned_cols=289 Identities=24% Similarity=0.241 Sum_probs=245.4
Q ss_pred ccccccccchhhhhhhhhhhhHHHHHHHhhhcCCCccccCCCCCCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHh
Q 006802 73 TRGVMEKQKSFRGFIEKQKSFRVVMERQLSFIGGGERKKNKDSPGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLL 152 (630)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l 152 (630)
.+.+.++.+...|..+..+.+ + ...+.+++.+|..|.||||+||..|+.++|++|++.+.+ +
T Consensus 23 ~~~~~L~~A~~~g~~~~v~~l-------l-----~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------~ 84 (351)
T 3utm_A 23 YKKDELLEAARSGNEEKLMAL-------L-----TPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD------V 84 (351)
T ss_dssp HHHHHHHHHHHHTCHHHHHHH-------C-----CTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC------T
T ss_pred ccchhHHHHHHcCCHHHHHHH-------H-----HhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------C
Confidence 334555556666655544422 2 135677888999999999999999999999999998764 6
Q ss_pred hcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHH
Q 006802 153 SKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTAL 232 (630)
Q Consensus 153 ~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL 232 (630)
+.+|..|.||||+|+..|+.+++++|+++ +.+++..+..|.||||+|+..|+.+++++|++.+.+ +...+..|.||+
T Consensus 85 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~~~l 161 (351)
T 3utm_A 85 HAKDKGGLVPLHNACSYGHYEVTELLLKH--GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGAD-PTLVNCHGKSAV 161 (351)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred CccCCCCCcHHHHHHHCCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CccccCCCCcch
Confidence 78899999999999999999999999998 566778889999999999999999999999999988 456788898887
Q ss_pred HHH---------------------HHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHc---CCHHHHHHHHhCCCCC
Q 006802 233 HTA---------------------AAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARM---GHLEVVKALVSKDPST 288 (630)
Q Consensus 233 ~~A---------------------a~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~~~ 288 (630)
++| +..++.+.++.++..+... ...+..|.||||+|+.. +..+++++|++.+.++
T Consensus 162 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~ 240 (351)
T 3utm_A 162 DMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIIN-FKQPQSHETALHCAVASLHPKRKQVAELLLRKGANV 240 (351)
T ss_dssp HHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTT-CCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCT
T ss_pred HHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhccc-ccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCc
Confidence 765 5566777777777665443 44567899999999999 5589999999999998
Q ss_pred CcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHH
Q 006802 289 GFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPL 368 (630)
Q Consensus 289 ~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL 368 (630)
+.. |..|+||||+|+..|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||+
T Consensus 241 ~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~gad~~~~~~~g~tal 317 (351)
T 3utm_A 241 NEK-NKDFMTPLHVAAERAHNDVMEVLHKHGAKM-NALDSLGQTALHRAALAGHLQTCRLLLS-YGSDPSIISLQGFTAA 317 (351)
T ss_dssp TCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHH
T ss_pred CCc-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHH-cCCCCCCcCCCCCChh
Confidence 765 899999999999999999999999999876 8999999999999999999999999999 8999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCC
Q 006802 369 DVAEKLGNTELFSLLKEAGAAH 390 (630)
Q Consensus 369 ~~A~~~~~~~iv~~L~~~ga~~ 390 (630)
++| ..+++++|.+.+...
T Consensus 318 ~~a----~~~~~~~l~~~~~~~ 335 (351)
T 3utm_A 318 QMG----NEAVQQILSESTPMR 335 (351)
T ss_dssp HHS----CHHHHHHHHHC----
T ss_pred hhh----hHHHHHHHHhccccc
Confidence 998 678999998887654
No 12
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.6e-37 Score=312.99 Aligned_cols=263 Identities=21% Similarity=0.267 Sum_probs=229.5
Q ss_pred cccccchhhhhhhhhhhhHHHHHHHhhhcCCCccccCCCCC-CCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhc
Q 006802 76 VMEKQKSFRGFIEKQKSFRVVMERQLSFIGGGERKKNKDSP-GKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSK 154 (630)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~ 154 (630)
++++.+...|.++..+.+. +.+.+++.. +..|.||||+|+..|+.+++++|++.+.+ ++.
T Consensus 7 ~~L~~A~~~g~~~~v~~Ll-------------~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------~~~ 67 (285)
T 1wdy_A 7 HLLIKAVQNEDVDLVQQLL-------------EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD------PVL 67 (285)
T ss_dssp HHHHHHHHTTCHHHHHHHH-------------HTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TTC
T ss_pred hHHHHHHHcCCHHHHHHHH-------------HcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC------Ccc
Confidence 4556666666665554322 223556666 78899999999999999999999998764 567
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccC---------C
Q 006802 155 KNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTT---------D 225 (630)
Q Consensus 155 ~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~---------d 225 (630)
+|..|.||||+|+..|+.+++++|+++ +.+++..+..|.||||+|+..|+.+++++|++.+.+..... +
T Consensus 68 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~ 145 (285)
T 1wdy_A 68 RKKNGATPFLLAAIAGSVKLLKLFLSK--GADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLR 145 (285)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhc
Confidence 889999999999999999999999998 56677788999999999999999999999999988754322 7
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhc-CCchhhhhccCCCcHHHHHHHcCC----HHHHHHHHhCCCCCCcccCCCCCchh
Q 006802 226 LSCSTALHTAAAQGHIDVVNFLLEI-DSNLAKIARNNGKTVLHSAARMGH----LEVVKALVSKDPSTGFRTDKKGQTAL 300 (630)
Q Consensus 226 ~~g~tpL~~Aa~~g~~e~v~~LL~~-~~~~~~~~d~~g~tpLh~Aa~~g~----~~iv~~Ll~~~~~~~~~~d~~g~t~L 300 (630)
..|.||||+|+..|+.+++++|++. |.++ +..|..|.||||.|+..|+ .+++++|++.+.+++.. |..|.|||
T Consensus 146 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~-~~~g~t~L 223 (285)
T 1wdy_A 146 KGGATALMDAAEKGHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVR-GERGKTPL 223 (285)
T ss_dssp CCCCCHHHHHHHHTCHHHHHHHHHTSCCCT-TCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCC-CTTSCCHH
T ss_pred cCCCcHHHHHHHcCCHHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCc-CCCCCcHH
Confidence 7899999999999999999999998 7776 7788999999999999999 99999999999998765 89999999
Q ss_pred hhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccC
Q 006802 301 HMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNK 362 (630)
Q Consensus 301 h~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~ 362 (630)
|+|+..|+.+++++|++.....++.+|.+|+||||+|+..|+.+++++|++ .|++++.+|.
T Consensus 224 ~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~-~Ga~~~~~d~ 284 (285)
T 1wdy_A 224 ILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCK-RGASTDCGDL 284 (285)
T ss_dssp HHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-HSSCSCCSSC
T ss_pred HHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHH-cCCCCCcccc
Confidence 999999999999999995444459999999999999999999999999999 8999998874
No 13
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=3.7e-38 Score=315.23 Aligned_cols=246 Identities=20% Similarity=0.265 Sum_probs=148.3
Q ss_pred CCCCCCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCC
Q 006802 112 NKDSPGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPA 191 (630)
Q Consensus 112 ~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~ 191 (630)
+++.+|.+|.||||+|+..|+... ....+...++.+++++|++.+. ......+
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~--------------------------~~~~~~~~~~~~~v~~Ll~~g~-~~~~~~d 54 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLE--------------------------TGNSEEEEDAPAVISDFIYQGA-SLHNQTD 54 (253)
T ss_dssp -----------------------------------------------------------------------------CCC
T ss_pred CCCCCCCCCCcHHHHHHhcccccc--------------------------ccchhhcCCChHHHHHHHHccC-CcccccC
Confidence 466778888888888888773100 0011344556777777776621 1223345
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHH
Q 006802 192 RNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAAR 271 (630)
Q Consensus 192 ~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~ 271 (630)
..|.||||+|+..|+.+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|++.++...+..+..|.||||+|+.
T Consensus 55 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 133 (253)
T 1yyh_A 55 RTGETALHLAARYSRSDAAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR 133 (253)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHH
Confidence 6677777777777777777777776666 345566777777777777777777777777664446667777777777777
Q ss_pred cCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhc
Q 006802 272 MGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLS 351 (630)
Q Consensus 272 ~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 351 (630)
.|+.+++++|++.+++++.. |..|.||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+..|+.+++++|++
T Consensus 134 ~~~~~~v~~Ll~~g~~~~~~-d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 211 (253)
T 1yyh_A 134 LAVEGMLEDLINSHADVNAV-DDLGKSALHWAAAVNNVDAAVVLLKNGANK-DMQNNREETPLFLAAREGSYETAKVLLD 211 (253)
T ss_dssp HTCSSHHHHHHHTTCCTTCB-CTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred cChHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 77777777777777776654 777788888888888888888888777665 7778888888888888888888888888
Q ss_pred ccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 006802 352 IEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGA 388 (630)
Q Consensus 352 ~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga 388 (630)
.|++++.+|..|.||+++|+..|+.+++++|.....
T Consensus 212 -~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 212 -HFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHH 247 (253)
T ss_dssp -TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC---
T ss_pred -cCCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhh
Confidence 788888888888888888888888888888877643
No 14
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=4.8e-38 Score=314.48 Aligned_cols=229 Identities=25% Similarity=0.280 Sum_probs=169.0
Q ss_pred hhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChH
Q 006802 152 LSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTA 231 (630)
Q Consensus 152 l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tp 231 (630)
++.+|..|.||||+|+..|+.-. ....+...++.+++++|++.++++....|..|.||
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~----------------------~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~ 60 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLE----------------------TGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETA 60 (253)
T ss_dssp -----------------------------------------------------------------------CCCTTSCCH
T ss_pred CCCCCCCCCcHHHHHHhcccccc----------------------ccchhhcCCChHHHHHHHHccCCcccccCCCCCcH
Confidence 56778899999999998875310 01125677899999999999999888789999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHH
Q 006802 232 LHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDI 311 (630)
Q Consensus 232 L~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~i 311 (630)
||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|++.++......+..|.||||+|+..++.++
T Consensus 61 L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 139 (253)
T 1yyh_A 61 LHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGM 139 (253)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHH
Confidence 99999999999999999999987 77889999999999999999999999999884444559999999999999999999
Q ss_pred HHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Q 006802 312 VLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHS 391 (630)
Q Consensus 312 v~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~~~ 391 (630)
+++|++.+.++ +.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++|++..
T Consensus 140 v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 217 (253)
T 1yyh_A 140 LEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLK-NGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217 (253)
T ss_dssp HHHHHHTTCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcc
Confidence 99999998876 8899999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred ccCCCCCchHHHHH
Q 006802 392 KDHGKPPSATKQLK 405 (630)
Q Consensus 392 ~~~~~~~~~~~~l~ 405 (630)
..+..+.++.....
T Consensus 218 ~~d~~g~tpl~~A~ 231 (253)
T 1yyh_A 218 ITDHMDRLPRDIAQ 231 (253)
T ss_dssp CCCTTCCCHHHHHH
T ss_pred ccccCCCCHHHHHH
Confidence 98888988877643
No 15
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=5.8e-38 Score=317.92 Aligned_cols=255 Identities=20% Similarity=0.173 Sum_probs=191.0
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCC
Q 006802 113 KDSPGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPAR 192 (630)
Q Consensus 113 ~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~ 192 (630)
++.+|..|.||||+||+.|+.++|++|++.+... ..++.+|..|.||||+|+..|+.++|++|+++ +.+++..+.
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~ 76 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGH---EYLDLQNDLGQTALHLAAILGEASTVEKLYAA--GAGVLVAER 76 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTS---GGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSSCCCT
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc---ccccccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCC
Confidence 4578999999999999999999999999987642 33788899999999999999999999999998 567788899
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCccc------------cCCCCCChHHHHHHHcCCHHHHH-HHHhcCCchhhhhc
Q 006802 193 NGYDSFHVAAKQGHLEVLKELLGEFPNLVM------------TTDLSCSTALHTAAAQGHIDVVN-FLLEIDSNLAKIAR 259 (630)
Q Consensus 193 ~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~------------~~d~~g~tpL~~Aa~~g~~e~v~-~LL~~~~~~~~~~d 259 (630)
.|.||||+|+..|+.+++++|++.++.... .....+.++++.++..+....+. .+...+.++ +..+
T Consensus 77 ~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 155 (282)
T 1oy3_D 77 GGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQL-EAEN 155 (282)
T ss_dssp TSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGT-TCCC
T ss_pred CCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcC-CCcC
Confidence 999999999999999999999998865321 12234567777776665544333 333344443 6678
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHH
Q 006802 260 NNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIK 339 (630)
Q Consensus 260 ~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~ 339 (630)
..|.||||+|+..|+.+++++|++.++++....+..|+||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+.
T Consensus 156 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~ 234 (282)
T 1oy3_D 156 YDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADP-TARMYGGRTPLGSALL 234 (282)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHT
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC-cccccCCCCHHHHHHH
Confidence 899999999999999999999999999988764456999999999999999999999998876 8899999999999999
Q ss_pred hCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcC
Q 006802 340 KGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLG 375 (630)
Q Consensus 340 ~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~ 375 (630)
.|+.+++++|++ +|++++.+|..|.|||++|....
T Consensus 235 ~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 235 RPNPILARLLRA-HGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp SSCHHHHHHHHH-TTCCCCCCC--------------
T ss_pred cCCcHHHHHHHH-cCCCcCcCCCcccccccccCCcc
Confidence 999999999998 89999999999999999987654
No 16
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=6.8e-38 Score=309.94 Aligned_cols=233 Identities=23% Similarity=0.272 Sum_probs=182.2
Q ss_pred hhcCCCCCCcHHHHHHHhCCHHHHHHHHhc--CCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCC
Q 006802 152 LSKKNQEGETPLYVAAESGHALIVEEMLQH--MNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCS 229 (630)
Q Consensus 152 l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~--~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~ 229 (630)
++.+|..|.||||+|+..|+.+++++|++. ..+.+++..+..|.||||+|+..|+.+++++|++.+.+ ++..|..|.
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~ 80 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS-PMALDRHGQ 80 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCC
Confidence 355677777888888888888877777762 12345666777788888888888888888888887766 345677788
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCC----chhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhcc
Q 006802 230 TALHTAAAQGHIDVVNFLLEIDS----NLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVK 305 (630)
Q Consensus 230 tpL~~Aa~~g~~e~v~~LL~~~~----~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~ 305 (630)
||||+|+..|+.+++++|++.++ ++ +..+..|.||||+|+..|+.+++++|++.++++....+..|.||||+|+.
T Consensus 81 t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 159 (241)
T 1k1a_A 81 TAAHLACEHRSPTCLRALLDSAAPGTLDL-EARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVE 159 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSCTTSCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccc-cccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHH
Confidence 88888888888888888888876 33 55677888888888888888888888888888776633788899999999
Q ss_pred CCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHH
Q 006802 306 GQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKE 385 (630)
Q Consensus 306 ~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~ 385 (630)
.|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.++++.|.+
T Consensus 160 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~ 237 (241)
T 1k1a_A 160 NNSLSMVQLLLQHGANV-NAQMYSGSSALHSASGRGLLPLVRTLVR-SGADSSLKNCHNDTPLMVARSRRVIDILRGKAT 237 (241)
T ss_dssp TTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCTTTTCSSHHHHHHHTC---
T ss_pred cCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhcc
Confidence 99999999999888776 8889999999999999999999999998 899999999999999999999999999998887
Q ss_pred cCC
Q 006802 386 AGA 388 (630)
Q Consensus 386 ~ga 388 (630)
.++
T Consensus 238 ~~a 240 (241)
T 1k1a_A 238 RPA 240 (241)
T ss_dssp ---
T ss_pred CCC
Confidence 764
No 17
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.4e-36 Score=300.04 Aligned_cols=221 Identities=29% Similarity=0.344 Sum_probs=128.4
Q ss_pred CCCCCCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCC
Q 006802 112 NKDSPGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPA 191 (630)
Q Consensus 112 ~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~ 191 (630)
+.+.++..|.||||+||..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|+++ +.+.+..+
T Consensus 3 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~ 74 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN------IDTCSEDQRTPLMEAAENNHLEAVKYLIKA--GALVDPKD 74 (237)
T ss_dssp CCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTCCCHHHHHHHTTCHHHHHHHHTT--TCCCCCCC
T ss_pred CcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCC------cCccCCCCCCHHHHHHHhCCHHHHHHHHhC--CCCCCCCC
Confidence 4455666667777777777777777777666543 455566666666666666666666666665 33444555
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHH
Q 006802 192 RNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAAR 271 (630)
Q Consensus 192 ~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~ 271 (630)
..|.||||+|+..|+.+++++|++.++...+..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+.
T Consensus 75 ~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 153 (237)
T 3b7b_A 75 AEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDI-NIRDNEENICLHWAAF 153 (237)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CccCCCCCCHHHHHHH
Confidence 556666666666666666666666654444455555556666666666666666665555554 4445555555555555
Q ss_pred cCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhc
Q 006802 272 MGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLS 351 (630)
Q Consensus 272 ~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 351 (630)
.|+.+++++|++.++++ +.+|..|+||||+|+..|+.+++++|++
T Consensus 154 ~~~~~~~~~Ll~~g~~~-----------------------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 198 (237)
T 3b7b_A 154 SGCVDIAEILLAAKCDL-----------------------------------HAVNIHGDSPLHIAARENRYDCVVLFLS 198 (237)
T ss_dssp HCCHHHHHHHHTTTCCT-----------------------------------TCCCTTCCCHHHHHHHTTCHHHHHHHHT
T ss_pred CCCHHHHHHHHHcCCCC-----------------------------------CCcCCCCCCHHHHHHHhCCHhHHHHHHH
Confidence 55555555555554444 4445555555555555555555555555
Q ss_pred ccCCCcccccCCCCCHHHHHHHcCCH
Q 006802 352 IEGIDVNSLNKAGESPLDVAEKLGNT 377 (630)
Q Consensus 352 ~~g~~in~~n~~G~TpL~~A~~~~~~ 377 (630)
.|++++.+|..|.||||+|+..++.
T Consensus 199 -~gad~~~~d~~g~t~l~~A~~~~~~ 223 (237)
T 3b7b_A 199 -RDSDVTLKNKEGETPLQCASLNSQV 223 (237)
T ss_dssp -TTCCTTCCCTTSCCHHHHSCTTCHH
T ss_pred -cCCCCCccCCCCCCHHHHHHHHHHH
Confidence 4555555555555555555555544
No 18
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=6.1e-37 Score=301.42 Aligned_cols=224 Identities=26% Similarity=0.281 Sum_probs=137.5
Q ss_pred CcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcC
Q 006802 160 ETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQG 239 (630)
Q Consensus 160 ~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g 239 (630)
.||||.|+..|+.+++++|++.. ....+..+.+|.||||+|+..|+.+++++|++.+.+ ++..|..|.||||+|+..|
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 84 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILAD-KSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP-VNDKDDAGWSPLHIAASAG 84 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHC-GGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHT
T ss_pred cchHHHHHHhCCHHHHHHHHHhc-hhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC-CCCcCCCCCCHHHHHHHcC
Confidence 34444444444444444444331 112233344444444444444444444444444433 2234445555555555555
Q ss_pred CHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCC
Q 006802 240 HIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPD 319 (630)
Q Consensus 240 ~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~ 319 (630)
+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++.+.++... |..|.||||+|+..|+.+++++|++.+
T Consensus 85 ~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g 162 (231)
T 3aji_A 85 XDEIVKALLVKGAHV-NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAK-DHYDATAMHRAAAKGNLKMVHILLFYK 162 (231)
T ss_dssp CHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc-CCCCCcHHHHHHHcCCHHHHHHHHhcC
Confidence 555555555555544 444555566666666666666666666665555443 566666666666666666666666666
Q ss_pred CCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 006802 320 PSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAA 389 (630)
Q Consensus 320 ~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~ 389 (630)
.++ +.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.|||++|...++.+++++|.++|++
T Consensus 163 ~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 163 AST-NIQDTEGNTPLHLACDEERVEEAKFLVT-QGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp CCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred CCc-cccCCCCCCHHHHHHHCCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 554 6778888888888888888888888888 7888888888888888888888888888888888765
No 19
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.5e-36 Score=299.74 Aligned_cols=213 Identities=25% Similarity=0.351 Sum_probs=167.6
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHH
Q 006802 188 SIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLH 267 (630)
Q Consensus 188 ~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh 267 (630)
+..+.+|.||||+|+..|+.+++++|++.+.+ .+..+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~ 82 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN-IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTCLH 82 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCHHH
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHHHcCCC-cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcHHH
Confidence 44555666666666666666666666666655 3445566677777777777777777777776665 455667777777
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHH
Q 006802 268 SAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVR 347 (630)
Q Consensus 268 ~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~ 347 (630)
+|+..|+.+++++|++.++......+..|.||||+|+..++.+++++|++.+.++ +.+|..|+||||+|+..|+.++++
T Consensus 83 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~ 161 (237)
T 3b7b_A 83 LAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDI-NIRDNEENICLHWAAFSGCVDIAE 161 (237)
T ss_dssp HHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHCCHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CccCCCCCCHHHHHHHCCCHHHHH
Confidence 7777777777777777774333344777888888888888888888888877765 788999999999999999999999
Q ss_pred HHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHH
Q 006802 348 CLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSATKQL 404 (630)
Q Consensus 348 ~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~~~~~~~~~~~~~~~l 404 (630)
+|++ .|++++..|..|.||||+|+..++.+++++|+++|++....+..+.++....
T Consensus 162 ~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A 217 (237)
T 3b7b_A 162 ILLA-AKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCA 217 (237)
T ss_dssp HHHT-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHS
T ss_pred HHHH-cCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHH
Confidence 9999 8999999999999999999999999999999999999999888888887654
No 20
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=4.3e-37 Score=324.31 Aligned_cols=231 Identities=25% Similarity=0.274 Sum_probs=212.3
Q ss_pred hhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChH
Q 006802 152 LSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTA 231 (630)
Q Consensus 152 l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tp 231 (630)
.+..|..|.||||+|+..|+.++|++|+++ +.+++..+..|.||||+|+..|+.+++++|++.+++. .+..|.||
T Consensus 13 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~g~t~ 87 (364)
T 3ljn_A 13 RIKSDDENMEKIHVAARKGQTDEVRRLIET--GVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH---SLWHGQKP 87 (364)
T ss_dssp ---CCHHHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC---CCBTTBCH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---cccCCCCH
Confidence 456688899999999999999999999998 5677888999999999999999999999999999853 34589999
Q ss_pred HHHHHHcCCHHHHHHHHhc----CCchhhh-----------------hccCCCcHHHHHHHcC--CHHHHHHHHhCCCCC
Q 006802 232 LHTAAAQGHIDVVNFLLEI----DSNLAKI-----------------ARNNGKTVLHSAARMG--HLEVVKALVSKDPST 288 (630)
Q Consensus 232 L~~Aa~~g~~e~v~~LL~~----~~~~~~~-----------------~d~~g~tpLh~Aa~~g--~~~iv~~Ll~~~~~~ 288 (630)
||+|+..|+.+++++|++. +.+. +. .|..|.||||+|+..| +.+++++|++.++++
T Consensus 88 L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~ 166 (364)
T 3ljn_A 88 IHLAVMANKTDLVVALVEGAKERGQMP-ESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASP 166 (364)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTCCH-HHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCT
T ss_pred HHHHHHcCCHHHHHHHHHhccccCCCH-HHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCC
Confidence 9999999999999999999 7766 44 7789999999999999 999999999999998
Q ss_pred CcccCCCCCchhhhhccCCCHHHHHHhhcCCCCc----ccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCC
Q 006802 289 GFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSV----LKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAG 364 (630)
Q Consensus 289 ~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~----~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G 364 (630)
+.. |..|.||||+|+..|+.+++++|++.+++. ++.+|..|+||||+|+..|+.++|++|++ .|++++..|..|
T Consensus 167 ~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~gad~~~~d~~g 244 (364)
T 3ljn_A 167 TAK-DKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVE-MGIDVNMEDNEH 244 (364)
T ss_dssp TCC-CTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHT-TTCCTTCCCTTS
T ss_pred ccc-CCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCC
Confidence 765 899999999999999999999999988762 48999999999999999999999999999 899999999999
Q ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCC
Q 006802 365 ESPLDVAEKLGNTELFSLLKEAGAAH 390 (630)
Q Consensus 365 ~TpL~~A~~~~~~~iv~~L~~~ga~~ 390 (630)
.||||+|+..|+.+++++|+++|++.
T Consensus 245 ~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 245 TVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp CCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred CCHHHHHHHhChHHHHHHHHHcCCch
Confidence 99999999999999999999999875
No 21
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=6.9e-37 Score=302.73 Aligned_cols=231 Identities=23% Similarity=0.280 Sum_probs=203.7
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCC
Q 006802 114 DSPGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARN 193 (630)
Q Consensus 114 ~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~ 193 (630)
+.+|.+|.||||+||+.|+.+++++|++..... +..++..|..|.||||+|+..|+.+++++|+++ +.+.+..+..
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~ 78 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQG--GRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA--GASPMALDRH 78 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHT--TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTT
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhc--CCCCCcccccCCCHHHHHHHcCCHHHHHHHHHc--CCCccccCCC
Confidence 467899999999999999999999999732111 123678899999999999999999999999997 4667778899
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCC---ccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhc-cCCCcHHHHH
Q 006802 194 GYDSFHVAAKQGHLEVLKELLGEFPN---LVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIAR-NNGKTVLHSA 269 (630)
Q Consensus 194 g~t~Lh~A~~~g~~eiv~~Ll~~~~~---~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d-~~g~tpLh~A 269 (630)
|.||||+|+..|+.+++++|++.++. ..+..|..|.||||+|+..|+.+++++|++.|+++ +..+ ..|.||||+|
T Consensus 79 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~g~t~L~~A 157 (241)
T 1k1a_A 79 GQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADI-DAVDIKSGRSPLIHA 157 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTTCCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCc-ccccccCCCcHHHHH
Confidence 99999999999999999999999873 35667889999999999999999999999999997 4445 7899999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHH
Q 006802 270 ARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCL 349 (630)
Q Consensus 270 a~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~L 349 (630)
+..|+.+++++|++.+++++.. |..|.||||+|+..|+.+++++|++.++++ +.+|..|+||||+|+..|+.++++.|
T Consensus 158 ~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~i~~~l 235 (241)
T 1k1a_A 158 VENNSLSMVQLLLQHGANVNAQ-MYSGSSALHSASGRGLLPLVRTLVRSGADS-SLKNCHNDTPLMVARSRRVIDILRGK 235 (241)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCB-CTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCTTTTCSSHHHHHHHTC-
T ss_pred HHcCCHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHhcCCCC-CCcCCCCCCHHHHHHhcCcHHHHhhh
Confidence 9999999999999999998865 899999999999999999999999999886 89999999999999999999999999
Q ss_pred hc
Q 006802 350 LS 351 (630)
Q Consensus 350 l~ 351 (630)
.+
T Consensus 236 ~~ 237 (241)
T 1k1a_A 236 AT 237 (241)
T ss_dssp --
T ss_pred cc
Confidence 87
No 22
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.7e-36 Score=296.77 Aligned_cols=228 Identities=26% Similarity=0.326 Sum_probs=210.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCc
Q 006802 117 GKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYD 196 (630)
Q Consensus 117 ~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t 196 (630)
+..++||||.||+.|+.+.+++|++.++ ..++..|..|.||||+|+..|+.+++++|+++ +.+++..+..|.|
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~-----~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t 75 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADK-----SLATRTDQDSRTALHWACSAGHTEIVEFLLQL--GVPVNDKDDAGWS 75 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCG-----GGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTSCC
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhch-----hhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHh--CCCCCCcCCCCCC
Confidence 4568899999999999999999998865 33778899999999999999999999999998 4667788899999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHH
Q 006802 197 SFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLE 276 (630)
Q Consensus 197 ~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~ 276 (630)
|||+|+..|+.+++++|++.+.+ .+..|..|.||||+|+..|+.+++++|+++|.++ +..+..|.||||+|+..|+.+
T Consensus 76 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~ 153 (231)
T 3aji_A 76 PLHIAASAGXDEIVKALLVKGAH-VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP-DAKDHYDATAMHRAAAKGNLK 153 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHH
T ss_pred HHHHHHHcCHHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHH
Confidence 99999999999999999999988 4567889999999999999999999999999987 678899999999999999999
Q ss_pred HHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCC
Q 006802 277 VVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGID 356 (630)
Q Consensus 277 iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~ 356 (630)
++++|++.++++... |..|.||||+|+..++.+++++|++.++++ +.+|..|.||||+|+..++.+++++|.+ .|++
T Consensus 154 ~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~i~~lL~~-~~a~ 230 (231)
T 3aji_A 154 MVHILLFYKASTNIQ-DTEGNTPLHLACDEERVEEAKFLVTQGASI-YIENKEEKTPLQVAKGGLGLILKRLAEG-EEAS 230 (231)
T ss_dssp HHHHHHHTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHSCHHHHHHHHHHHHH-HHHC
T ss_pred HHHHHHhcCCCcccc-CCCCCCHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHhhHHHHHHHHHcc-cccc
Confidence 999999999998765 899999999999999999999999999876 8999999999999999999999999998 5554
No 23
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=308.48 Aligned_cols=270 Identities=17% Similarity=0.176 Sum_probs=209.5
Q ss_pred CccccccccchhhhhhhhhhhhHHHHHHHhhhcCCCccccCCCCCCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHH
Q 006802 72 STRGVMEKQKSFRGFIEKQKSFRVVMERQLSFIGGGERKKNKDSPGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDL 151 (630)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~ 151 (630)
..+.+..|.+...|..+..........+ .+.....-....+..+..|.||||+||..|+.++|++|++.+.+
T Consensus 13 ~~~~~~lH~Aa~~g~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~------ 84 (285)
T 3d9h_A 13 GLVPRGSHMASMDGKQGGMDGSKPAGPR--DFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA------ 84 (285)
T ss_dssp -------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC------
T ss_pred hHHHHHHHHHhhcCCCCCcccCCCCccc--cccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCC------
Confidence 3445778888888775544422111000 00000011233567889999999999999999999999998754
Q ss_pred hhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChH
Q 006802 152 LSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTA 231 (630)
Q Consensus 152 l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tp 231 (630)
++.+|..|.||||+|+..|+.++|++|+++ +.+++..+..|.||||+|+..|+.+++++|++.++++. .+..|.||
T Consensus 85 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~ 160 (285)
T 3d9h_A 85 VNIITADHVSPLHEACLGGHLSCVKILLKH--GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLASP 160 (285)
T ss_dssp SCEECTTCCCHHHHHHHTTCHHHHHHHHHT--TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTSCH
T ss_pred CCCcCCCCCCHHHHHHHCCcHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC--CCCCCCCH
Confidence 678899999999999999999999999998 56778889999999999999999999999999998854 24469999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHH
Q 006802 232 LHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDI 311 (630)
Q Consensus 232 L~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~i 311 (630)
||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|++.+++++ .+..|.||||+|+..++.++
T Consensus 161 L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~~g~t~L~~A~~~~~~~~ 237 (285)
T 3d9h_A 161 IHEAARRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQRACVKKLLESGADVN--QGKGQDSPLHAVVRTASEEL 237 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT--CCBTTBCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCCHHH
Confidence 99999999999999999999987 7789999999999999999999999999999987 38899999999999999999
Q ss_pred HHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCccc
Q 006802 312 VLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNS 359 (630)
Q Consensus 312 v~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~ 359 (630)
+++|++.+.++ +.+|.+|+||||+|+ ++.+++++|++..|+++..
T Consensus 238 v~~Ll~~gad~-~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l~~ 282 (285)
T 3d9h_A 238 ACLLMDFGADT-QAKNAEGKRPVELVP--PESPLAQLFLEREGASLPK 282 (285)
T ss_dssp HHHHHHTTCCT-TCCCTTSCCGGGGSC--TTSHHHHHHHHHC------
T ss_pred HHHHHHCCCCC-CCcCCCCCCHHHHhc--CccHHHHHHHHhhccCCCC
Confidence 99999998876 899999999999999 5579999999966877653
No 24
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=304.25 Aligned_cols=222 Identities=23% Similarity=0.324 Sum_probs=202.9
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHH
Q 006802 158 EGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAA 237 (630)
Q Consensus 158 ~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~ 237 (630)
+|+||||+|+..|+.+++++|+++ +.+++..+.+|.||||+|+..|+.+++++|++.+.+ ++..|..|.||||+|+.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~ 78 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQ--GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACV 78 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT--TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHH
Confidence 589999999999999999999998 466788899999999999999999999999999887 56778999999999999
Q ss_pred cCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhc
Q 006802 238 QGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIR 317 (630)
Q Consensus 238 ~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~ 317 (630)
.|+.+++++|+++|++.. .+.+|.||||+|+..|+.+++++|++.++++... |..|.||||+|+..|+.+++++|++
T Consensus 79 ~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~ 155 (261)
T 2xai_A 79 SGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAYGGNIDHK-ISHLGTPLYLACENQQRACVKKLLE 155 (261)
T ss_dssp HTCHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-BTTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcC-CCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 999999999999999873 3567999999999999999999999999998765 8999999999999999999999999
Q ss_pred CCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Q 006802 318 PDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAH 390 (630)
Q Consensus 318 ~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~~ 390 (630)
.+.++ +. |..|+||||+|+..|+.+++++|++ .|++++.+|..|+||+|+|+..+ +++++|+++++..
T Consensus 156 ~g~~~-~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~ 223 (261)
T 2xai_A 156 SGADV-NQ-GKGQDSPLHAVARTASEELACLLMD-FGADTQAKNAEGKRPVELVPPES--PLAQLFLEREGPP 223 (261)
T ss_dssp HTCCT-TC-CBTTBCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCGGGGSCTTC--THHHHHHHC-CCC
T ss_pred cCCCC-CC-CCCCCChHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCChhhhccccc--cHHHHHHhccCCc
Confidence 98876 53 8899999999999999999999999 89999999999999999999544 5899999987654
No 25
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=5.4e-36 Score=293.86 Aligned_cols=221 Identities=24% Similarity=0.260 Sum_probs=148.8
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcC--CCccccCCCCCChHHHHHH
Q 006802 159 GETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEF--PNLVMTTDLSCSTALHTAA 236 (630)
Q Consensus 159 g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~--~~~~~~~d~~g~tpL~~Aa 236 (630)
|+||||+|+..|+.++|++|++.+ .......+..|.||||+|+..|+.+++++|++.+ +++....+..|.||||+|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~ 80 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSK-PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC 80 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHC-GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcC-ccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHH
Confidence 345555555555555555555442 1222224445555555555555555555555554 3322224556666666666
Q ss_pred HcCCHHHHHHHHhcC--CchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHH
Q 006802 237 AQGHIDVVNFLLEID--SNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLE 314 (630)
Q Consensus 237 ~~g~~e~v~~LL~~~--~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~ 314 (630)
..|+.+++++|+++| +++ +..+..|.||||.|+..|+.+++++|++.+.++... |..|.||||+|+..|+.+++++
T Consensus 81 ~~~~~~~~~~Ll~~g~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~ 158 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPLKPDL-NKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIK-DKFNQIPLHRAASVGSLKLIEL 158 (228)
T ss_dssp HHCCHHHHHHHHSSSSCCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCccc-ccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCcccc-CCCCCCHHHHHHHcCCHHHHHH
Confidence 666666666666665 443 455667777777777777777777777777776654 7778888888888888888888
Q ss_pred hhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHH
Q 006802 315 LIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKE 385 (630)
Q Consensus 315 Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~ 385 (630)
|++.++..++.+|.+|+||||+|+..|+.+++++|++..|++++.+|..|.||+++|... +++++|++
T Consensus 159 Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 159 LCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp HHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred HHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence 888775555888999999999999999999999999438999999999999999998643 56666654
No 26
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=9.3e-36 Score=293.80 Aligned_cols=233 Identities=27% Similarity=0.328 Sum_probs=208.1
Q ss_pred hcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHH
Q 006802 153 SKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTAL 232 (630)
Q Consensus 153 ~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL 232 (630)
...|..|.||||.|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.+++.....+..|.|||
T Consensus 3 ~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L 80 (240)
T 3eu9_A 3 THIDDYSTWDIVKATQYGIYERCRELVEA--GYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPL 80 (240)
T ss_dssp CCCSCGGGCCHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHH
T ss_pred cccccccchHHHHHHHcCChHHHHHHHHc--CCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChh
Confidence 45678889999999999999999999987 4567778889999999999999999999999999987777777799999
Q ss_pred HHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCC-HHH
Q 006802 233 HTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQN-EDI 311 (630)
Q Consensus 233 ~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~-~~i 311 (630)
|+|+..|+.+++++|++.|+++ +..+..|.||||.|+..|+.+++++|++.++++... +..|.||||+|+..++ .++
T Consensus 81 ~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~-~~~g~t~l~~a~~~~~~~~~ 158 (240)
T 3eu9_A 81 HWATRQGHLSMVVQLMKYGADP-SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMM-DQNGMTPLMWAAYRTHSVDP 158 (240)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHHCCSSTT
T ss_pred HHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcccc-CCCCCcHHHHHHHhCChHHH
Confidence 9999999999999999999887 667889999999999999999999999999988765 8899999999996665 889
Q ss_pred HHHhhcCCCCcccccCC-CCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Q 006802 312 VLELIRPDPSVLKLEDN-KGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAH 390 (630)
Q Consensus 312 v~~Ll~~~~~~~n~~d~-~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~~ 390 (630)
+++|++.+.++ +..+. .|+||||+|+..|+.+++++|++ .|++++..|..|.|||++|+..++.+++++|+++|++.
T Consensus 159 ~~~L~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 159 TRLLLTFNVSV-NLGDKYHKNTALHWAVLAGNTTVISLLLE-AGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAK 236 (240)
T ss_dssp HHHHHHTTCCT-TCCCTTTCCCHHHHHHHHTCHHHHHHHHH-HTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC---
T ss_pred HHHHHhcCCCc-chhhccCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhcc
Confidence 99999998877 66675 89999999999999999999999 79999999999999999999999999999999999876
Q ss_pred c
Q 006802 391 S 391 (630)
Q Consensus 391 ~ 391 (630)
.
T Consensus 237 ~ 237 (240)
T 3eu9_A 237 G 237 (240)
T ss_dssp -
T ss_pred C
Confidence 4
No 27
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.3e-35 Score=300.65 Aligned_cols=249 Identities=20% Similarity=0.229 Sum_probs=191.2
Q ss_pred hhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCcc-ccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCh
Q 006802 152 LSKKNQEGETPLYVAAESGHALIVEEMLQHMNLE-TASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCST 230 (630)
Q Consensus 152 l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~-~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~t 230 (630)
++.+|..|+||||+|+..|+.++|++|++++... .++..+..|.||||+|+..|+.+++++|++++++ ++..|..|.|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t 80 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG-VLVAERGGHT 80 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTSCC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCC
Confidence 5678999999999999999999999999974332 2677889999999999999999999999999988 4567889999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCchh------------hhhccCCCcHHHHHHHcCCHHHHHHH-HhCCCCCCcccCCCCC
Q 006802 231 ALHTAAAQGHIDVVNFLLEIDSNLA------------KIARNNGKTVLHSAARMGHLEVVKAL-VSKDPSTGFRTDKKGQ 297 (630)
Q Consensus 231 pL~~Aa~~g~~e~v~~LL~~~~~~~------------~~~d~~g~tpLh~Aa~~g~~~iv~~L-l~~~~~~~~~~d~~g~ 297 (630)
|||+|+..|+.+++++|++++++.. ......+.++++.++..+....+..+ ...+.++.. .+..|.
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~ 159 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEA-ENYDGH 159 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTC-CCTTSC
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCC-cCCCCc
Confidence 9999999999999999999886531 12234567788877776654443333 333444443 488999
Q ss_pred chhhhhccCCCHHHHHHhhcCCCCcccccCC-CCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCC
Q 006802 298 TALHMAVKGQNEDIVLELIRPDPSVLKLEDN-KGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGN 376 (630)
Q Consensus 298 t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~-~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~ 376 (630)
||||+|+..|+.+++++|++.++++ +..+. .|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++
T Consensus 160 t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~ 237 (282)
T 1oy3_D 160 TPLHVAVIHKDAEMVRLLRDAGADL-NKPEPTCGRTPLHLAVEAQAASVLELLLK-AGADPTARMYGGRTPLGSALLRPN 237 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHTSSC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCcCHHHHHHHcCCHHHHHHHHH-cCCCCcccccCCCCHHHHHHHcCC
Confidence 9999999999999999999999887 66664 59999999999999999999999 799999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcccCCCCCchHHHH
Q 006802 377 TELFSLLKEAGAAHSKDHGKPPSATKQL 404 (630)
Q Consensus 377 ~~iv~~L~~~ga~~~~~~~~~~~~~~~l 404 (630)
.+++++|+++|+++...+..+.+|....
T Consensus 238 ~~~v~~Ll~~ga~~~~~~~~g~tpl~~a 265 (282)
T 1oy3_D 238 PILARLLRAHGAPEPEDGGDKLSPCSSS 265 (282)
T ss_dssp HHHHHHHHHTTCCCCCCC----------
T ss_pred cHHHHHHHHcCCCcCcCCCccccccccc
Confidence 9999999999999999888888876654
No 28
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.3e-35 Score=302.29 Aligned_cols=244 Identities=19% Similarity=0.189 Sum_probs=214.4
Q ss_pred HHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCH
Q 006802 128 ARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHL 207 (630)
Q Consensus 128 a~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~ 207 (630)
++..+.+.+..+|.... ++.+|..|.||||+|+..|+.++|++|+++ +.+++.. +|.||||+|+..|+.
T Consensus 7 i~~~~~~~v~~lL~~~~-------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~--~g~t~L~~A~~~g~~ 75 (285)
T 3kea_A 7 INTWKSKQLKSFLSSKD-------TFKADVHGHSASYYAIADNNVRLVCTLLNA--GALKNLL--ENEFPLHQAATLEDT 75 (285)
T ss_dssp GGGCCHHHHHHHHHSTT-------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TGGGSCC--TTCCHHHHHTTSSSC
T ss_pred HHhcCHHHHHHHHHhCC-------CCccCCCCCCHHHHHHHcCCHHHHHHHHhC--CCCCCCC--CCCCHHHHHHHcCCH
Confidence 34566666777776542 678899999999999999999999999998 3444443 599999999999999
Q ss_pred HHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCC-CcHHHHHHHcCCHHHHHHHHhCCC
Q 006802 208 EVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNG-KTVLHSAARMGHLEVVKALVSKDP 286 (630)
Q Consensus 208 eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g-~tpLh~Aa~~g~~~iv~~Ll~~~~ 286 (630)
+++++|++.+++ ++..|..|.||||+|+..|+.+++++|+++|+++ +..+..| .||||+|+..|+.+++++|++.++
T Consensus 76 ~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~ 153 (285)
T 3kea_A 76 KIVKILLFSGLD-DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP 153 (285)
T ss_dssp HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGG-GGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSC
T ss_pred HHHHHHHHCCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCC-CccCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 999999999988 4567889999999999999999999999999987 6788888 799999999999999999999998
Q ss_pred CCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChH-HHHHHHhCcHHHHHHHhcccCCCcccccCCCC
Q 006802 287 STGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTA-LHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGE 365 (630)
Q Consensus 287 ~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~Tp-Lh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~ 365 (630)
+... ...|.||||+|+..|+.+++++|++.++++ +.+|..|+|| ||+|+..|+.+++++|++ .|++++..|.
T Consensus 154 ~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~-n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~-~gad~~~~~~--- 226 (285)
T 3kea_A 154 STFD--LAILLSCIHITIKNGHVDMMILLLDYMTST-NTNNSLLFIPDIKLAIDNKDIEMLQALFK-YDINIYSANL--- 226 (285)
T ss_dssp TTCC--CSTHHHHHHHHHHTTCHHHHHHHHHHHHHT-CTTCCCBCCTTHHHHHHHTCHHHHHHHTT-SCBCSTTTTG---
T ss_pred cccc--ccCCccHHHHHHHcChHHHHHHHHHcCCCC-CcccCCCCChHHHHHHHcCCHHHHHHHHH-cCCCCCCCCh---
Confidence 8732 238999999999999999999999998776 8899999998 999999999999999999 8999999884
Q ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Q 006802 366 SPLDVAEKLGNTELFSLLKEAGAAHSKDHG 395 (630)
Q Consensus 366 TpL~~A~~~~~~~iv~~L~~~ga~~~~~~~ 395 (630)
.|+..++.+++++|+++|++......
T Consensus 227 ----~a~~~~~~~iv~~Ll~~g~~~~~~~~ 252 (285)
T 3kea_A 227 ----ENVLLDDAEIAKMIIEKHVEYKSDSY 252 (285)
T ss_dssp ----GGGTTTCHHHHHHHHHHHHHHTTCTT
T ss_pred ----hhhhcCCHHHHHHHHHcCCCCCCccc
Confidence 55778999999999999998765443
No 29
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=3.4e-36 Score=318.74 Aligned_cols=264 Identities=20% Similarity=0.234 Sum_probs=211.4
Q ss_pred hHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCC-CCCCcHHHH
Q 006802 122 LQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPA-RNGYDSFHV 200 (630)
Q Consensus 122 T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~-~~g~t~Lh~ 200 (630)
++++-+...|+.++++.++.. .++..|.||||+|+..|+ +++++|+.. .++..+ ..|.||||+
T Consensus 68 ~~~~~~~~~g~~~~~~~~~~~-----------~~~~~g~t~L~~Aa~~~~-~~~~~L~~~----~~n~~d~~~g~t~Lh~ 131 (373)
T 2fo1_E 68 GYGNGNDFLGDFNHTNLQIPT-----------EPEPESPIKLHTEAAGSY-AITEPITRE----SVNIIDPRHNRTVLHW 131 (373)
T ss_dssp -------------------------------------CCCHHHHHHHSSS-CCCSCCSTT----TTTTCCCSSCCCHHHH
T ss_pred ccCCCCCcccccccccccccc-----------CCCCCCccHHHHHhcCCc-hHHHHhccc----cccccCCcCCCCHHHH
Confidence 456778888999999887643 347889999999999654 788777653 456666 789999999
Q ss_pred HHHcCCHHHHHHHH--------hcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHc
Q 006802 201 AAKQGHLEVLKELL--------GEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARM 272 (630)
Q Consensus 201 A~~~g~~eiv~~Ll--------~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~ 272 (630)
|+..|+.+++++|+ +.+.+ ++..|..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..
T Consensus 132 Aa~~g~~~~v~~Ll~~~~~~ll~~ga~-vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~g~t~L~~A~~~ 209 (373)
T 2fo1_E 132 IASNSSAEKSEDLIVHEAKECIAAGAD-VNAMDCDENTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSERSALHQAAAN 209 (373)
T ss_dssp HHCTTCCSCCTTHHHHHHHHHHHTCCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHT
T ss_pred HHHCCCHHHHHHHHHHHHHHHHhcCCC-CcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCC-cccCCCCCCHHHHHHHC
Confidence 99999998888776 66776 5678999999999999999999999999999987 67889999999999999
Q ss_pred CCHHHHHHHHhCC---CCCCcccCCCCCchhhhhccCC---CHHHHHHhhcCCCCcc-------cccCCCCChHHHHHHH
Q 006802 273 GHLEVVKALVSKD---PSTGFRTDKKGQTALHMAVKGQ---NEDIVLELIRPDPSVL-------KLEDNKGNTALHIAIK 339 (630)
Q Consensus 273 g~~~iv~~Ll~~~---~~~~~~~d~~g~t~Lh~Aa~~g---~~~iv~~Ll~~~~~~~-------n~~d~~G~TpLh~A~~ 339 (630)
|+.+++++|++.+ .+.... |..|.||||+|+..+ +.+++++|++.+.++. +..|..|+||||+|+.
T Consensus 210 g~~~~v~~Ll~~~~~~~~~~~~-d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~ 288 (373)
T 2fo1_E 210 RDFGMMVYMLNSTKLKGDIEEL-DRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQ 288 (373)
T ss_dssp TCHHHHHHHTTSHHHHHTTSCC-CTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHS
T ss_pred CCHHHHHHHHhcCccccChhhc-CCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHH
Confidence 9999999999987 565544 899999999999988 8999999999987651 2367899999999999
Q ss_pred hCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHH
Q 006802 340 KGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSATKQL 404 (630)
Q Consensus 340 ~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~~~~~~~~~~~~~~~l 404 (630)
.|+.++|++|++..+++++.+|..|.||||+|+..|+.+++++|+++|++....+..+.++....
T Consensus 289 ~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A 353 (373)
T 2fo1_E 289 VSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLA 353 (373)
T ss_dssp SCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHH
T ss_pred hCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHH
Confidence 99999999999866799999999999999999999999999999999999998888888887654
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=305.44 Aligned_cols=229 Identities=28% Similarity=0.349 Sum_probs=154.9
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhcCCcc------ccccCCCCCCcHHHHHHHcCCH-HHHHHHHhcCCCccccCCCC
Q 006802 155 KNQEGETPLYVAAESGHALIVEEMLQHMNLE------TASIPARNGYDSFHVAAKQGHL-EVLKELLGEFPNLVMTTDLS 227 (630)
Q Consensus 155 ~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~------~~~~~~~~g~t~Lh~A~~~g~~-eiv~~Ll~~~~~~~~~~d~~ 227 (630)
+|..+.+||+.||..|+.++|++||+.+... ..+..+..|.||||.|+..++. .+++.|++.+.+ ++..|.+
T Consensus 7 kd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gad-vn~~d~~ 85 (269)
T 4b93_B 7 KDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLG-VNVTSQD 85 (269)
T ss_dssp CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCC-TTCCCTT
T ss_pred cCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCC-CCCcCCC
Confidence 3445556666666666666666666553211 1334556677888888776665 467778877777 4567788
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCC
Q 006802 228 CSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQ 307 (630)
Q Consensus 228 g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g 307 (630)
|.||||+|+..|+.+++++|++.++++ +..+.+|.||+|.|+..++.+++++|++.+++++.. |..|+||||+|+..|
T Consensus 86 G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~-d~~g~TpL~~A~~~g 163 (269)
T 4b93_B 86 GSSPLHVAALHGRADLIPLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKK-DLSGNTPLIYACSGG 163 (269)
T ss_dssp SCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCC-CTTCCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHCC
Confidence 888888888888888888888888876 667888889999999999999999999888888765 888999999999999
Q ss_pred CHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCC-HHHHHHHHHc
Q 006802 308 NEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGN-TELFSLLKEA 386 (630)
Q Consensus 308 ~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~-~~iv~~L~~~ 386 (630)
+.+++++|++.++++ |.+|..|+||||+|+..|+.++|++|++ .|+|++.+|..|+||||+|+++++ .+++++|...
T Consensus 164 ~~~~v~~Ll~~gadv-n~~~~~g~t~Lh~A~~~g~~~~v~~Ll~-~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~ 241 (269)
T 4b93_B 164 HHELVALLLQHGASI-NASNNKGNTALHEAVIEKHVFVVELLLL-HGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSC 241 (269)
T ss_dssp CGGGHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC----
T ss_pred CHHHHHHHHHCCCCC-CccccCCCcHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHh
Confidence 999999999988776 8889999999999999999999999998 899999999999999999987664 2333344444
Q ss_pred CC
Q 006802 387 GA 388 (630)
Q Consensus 387 ga 388 (630)
++
T Consensus 242 ~~ 243 (269)
T 4b93_B 242 VA 243 (269)
T ss_dssp --
T ss_pred ch
Confidence 43
No 31
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-35 Score=304.08 Aligned_cols=253 Identities=21% Similarity=0.268 Sum_probs=215.5
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCC
Q 006802 115 SPGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNG 194 (630)
Q Consensus 115 ~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g 194 (630)
..+..|.||||.||..|+.++|++|++.+.+ ++..|..|.||||+|+..|+.++|++|+++ +.+++..+..|
T Consensus 35 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g 106 (299)
T 1s70_B 35 KVKFDDGAVFLAACSSGDTEEVLRLLERGAD------INYANVDGLTALHQACIDDNVDMVKFLVEN--GANINQPDNEG 106 (299)
T ss_dssp CCEECHHHHHHHHHHHTCHHHHHHHHHHCCC------TTCBCTTCCBHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTS
T ss_pred ccccCCccHHHHHHHcCCHHHHHHHHHcCCC------CcccCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCC
Confidence 3456789999999999999999999998764 677899999999999999999999999997 56778889999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCC
Q 006802 195 YDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGH 274 (630)
Q Consensus 195 ~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~ 274 (630)
.||||+|+..|+.+++++|++.+++ ++..|..|.||||+|+..|+.++++.++.......+..+..+.++++.
T Consensus 107 ~tpL~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~------ 179 (299)
T 1s70_B 107 WIPLHAAASCGYLDIAEYLISQGAH-VGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLR------ 179 (299)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH------
T ss_pred CcHHHHHHHcCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHH------
Confidence 9999999999999999999999988 456789999999999999999999998875433334444444444443
Q ss_pred HHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccC
Q 006802 275 LEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEG 354 (630)
Q Consensus 275 ~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g 354 (630)
.+..++..+.......+..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|
T Consensus 180 --~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~-~g 255 (299)
T 1s70_B 180 --DARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDV-NIKDYDGWTPLHAAAHWGKEEACRILVE-NL 255 (299)
T ss_dssp --HHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH-TT
T ss_pred --HHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHhcCCHHHHHHHHH-cC
Confidence 3455666666666666889999999999999999999999998876 8999999999999999999999999999 89
Q ss_pred CCcccccCCCCCHHHHHHHcCCHHHHHHHHHc
Q 006802 355 IDVNSLNKAGESPLDVAEKLGNTELFSLLKEA 386 (630)
Q Consensus 355 ~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ 386 (630)
++++.+|..|+||||+|.+.....+.+++.+.
T Consensus 256 ad~~~~d~~g~t~l~~A~~~~~~~l~~l~~~~ 287 (299)
T 1s70_B 256 CDMEAVNKVGQTAFDVADEDILGYLEELQKKQ 287 (299)
T ss_dssp CCTTCCCTTSCCTTTSCCSGGGHHHHHHHHHT
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999765444444444443
No 32
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=4.5e-35 Score=287.26 Aligned_cols=220 Identities=28% Similarity=0.425 Sum_probs=196.2
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCcccccc-CCCCCCcHH
Q 006802 120 GDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASI-PARNGYDSF 198 (630)
Q Consensus 120 g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~-~~~~g~t~L 198 (630)
|+||||.||+.|+.+++++|++.++. .....|..|.||||+|+..|+.+++++|++.+...+... .+..|.|||
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~-----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L 76 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPS-----LLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPF 76 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGG-----GTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCcc-----ccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHH
Confidence 78999999999999999999998753 356689999999999999999999999999864455555 788999999
Q ss_pred HHHHHcCCHHHHHHHHhcC--CCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHH
Q 006802 199 HVAAKQGHLEVLKELLGEF--PNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLE 276 (630)
Q Consensus 199 h~A~~~g~~eiv~~Ll~~~--~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~ 276 (630)
|+|+..|+.+++++|++.+ ++ .+..+..|.||||+|+..|+.+++++|+++|.++ +..|..|.||||+|+..|+.+
T Consensus 77 ~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~ 154 (228)
T 2dzn_A 77 HIACSVGNLEVVKSLYDRPLKPD-LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASV-RIKDKFNQIPLHRAASVGSLK 154 (228)
T ss_dssp HHHHHHCCHHHHHHHHSSSSCCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHcCCHHHHHHHHhCCCCcc-cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHH
Confidence 9999999999999999998 54 5667889999999999999999999999999987 778899999999999999999
Q ss_pred HHHHHHhCC-CCCCcccCCCCCchhhhhccCCCHHHHHHhh-cCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhc
Q 006802 277 VVKALVSKD-PSTGFRTDKKGQTALHMAVKGQNEDIVLELI-RPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLS 351 (630)
Q Consensus 277 iv~~Ll~~~-~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll-~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 351 (630)
++++|++.+ .+++. .|..|+||||+|+..|+.+++++|+ +.+.++ +.+|.+|.||||+|+.. +++++|++
T Consensus 155 ~v~~Ll~~g~~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~-~~~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 155 LIELLCGLGKSAVNW-QDKQGWTPLFHALAEGHGDAAVLLVEKYGAEY-DLVDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp HHHHHHTTTCCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCS-CCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred HHHHHHhcCcccccC-cCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCC-CccCCCCCcHHHHHHHH---HHHHHHHh
Confidence 999999999 55554 5999999999999999999999999 777765 89999999999999765 56666665
No 33
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.9e-36 Score=301.20 Aligned_cols=227 Identities=26% Similarity=0.302 Sum_probs=174.5
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHhcChhh--hhHHhhcCCCCCCcHHHHHHHhCCHH-HHHHHHhcCCccccccCC
Q 006802 115 SPGKRGDLQLHLAARAGNLSRVMEILQSCDANE--AKDLLSKKNQEGETPLYVAAESGHAL-IVEEMLQHMNLETASIPA 191 (630)
Q Consensus 115 ~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~--~~~~l~~~n~~g~TpLh~Aa~~g~~e-iv~~LL~~~~~~~~~~~~ 191 (630)
.+|.++.++|+.||+.|+.++|++||+.+.... ....++..+..|.||||.|+..++.+ ++++|++. +.+++..|
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~--Gadvn~~d 83 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPAS--GLGVNVTS 83 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------C--CCCTTCCC
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHC--CCCCCCcC
Confidence 356778899999999999999999999876431 12346677889999999999888764 78899987 56788899
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHH
Q 006802 192 RNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAAR 271 (630)
Q Consensus 192 ~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~ 271 (630)
.+|.||||+|+..|+.+++++|++.+++ +...+..|.||+|.|+..++.+++++|++.|+++ +..|..|.||||+|+.
T Consensus 84 ~~G~TpLh~A~~~g~~~~v~~Ll~~~a~-~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d~~g~TpL~~A~~ 161 (269)
T 4b93_B 84 QDGSSPLHVAALHGRADLIPLLLKHGAN-AGARNADQAVPLHLACQQGHFQVVKCLLDSNAKP-NKKDLSGNTPLIYACS 161 (269)
T ss_dssp TTSCCHHHHHHHTTCTTHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHhcCCC-cCccCCCCCCccccccccChHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHH
Confidence 9999999999999999999999999988 5667889999999999999999999999999987 7789999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHH
Q 006802 272 MGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCL 349 (630)
Q Consensus 272 ~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~L 349 (630)
.|+.+++++|++.+++++.. +..|.||||+|+..|+.++|++|++.|+++ +.+|.+|+||||+|+++++ ++++|
T Consensus 162 ~g~~~~v~~Ll~~gadvn~~-~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~-~~~d~~G~TpL~~A~~~~~--i~~lL 235 (269)
T 4b93_B 162 GGHHELVALLLQHGASINAS-NNKGNTALHEAVIEKHVFVVELLLLHGASV-QVLNKRQRTAVDCAEQNSK--IMELL 235 (269)
T ss_dssp TTCGGGHHHHHHTTCCTTCB-CTTSCBHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCSGGGSCTTCH--HHHHT
T ss_pred CCCHHHHHHHHHCCCCCCcc-ccCCCcHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHhCCc--HHHHH
Confidence 99999999999999998865 999999999999999999999999999876 9999999999999998875 44443
No 34
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=2e-34 Score=284.28 Aligned_cols=234 Identities=21% Similarity=0.252 Sum_probs=207.9
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCC
Q 006802 113 KDSPGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPAR 192 (630)
Q Consensus 113 ~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~ 192 (630)
++..|..|.|+||.|+..|+.+++++|++.+.+ ++.++..|.||||+|+..|+.+++++|++++. ......+.
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~ 74 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYD------VRQPDKENVTLLHWAAINNRIDLVKYYISKGA-IVDQLGGD 74 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCBTT
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCC------cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCC-cchhhcCC
Confidence 345678899999999999999999999998754 67788999999999999999999999999842 22334556
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHc
Q 006802 193 NGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARM 272 (630)
Q Consensus 193 ~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~ 272 (630)
.|.||||+|+..|+.+++++|++.+.+ .+..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||.|+..
T Consensus 75 ~~~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~-~~~~~~g~t~l~~a~~~ 152 (240)
T 3eu9_A 75 LNSTPLHWATRQGHLSMVVQLMKYGAD-PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDV-DMMDQNGMTPLMWAAYR 152 (240)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHH
T ss_pred cCCChhHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCc-cccCCCCCcHHHHHHHh
Confidence 699999999999999999999999887 4567889999999999999999999999999987 77889999999999977
Q ss_pred CC-HHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhc
Q 006802 273 GH-LEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLS 351 (630)
Q Consensus 273 g~-~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 351 (630)
++ .+++++|++.+++.....+..|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|++
T Consensus 153 ~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~v~~L~~ 231 (240)
T 3eu9_A 153 THSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANV-DAQNIKGESALDLAKQRKNVWMINHLQE 231 (240)
T ss_dssp CCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred CChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 76 899999999999998774448999999999999999999999998776 8999999999999999999999999999
Q ss_pred ccCCCc
Q 006802 352 IEGIDV 357 (630)
Q Consensus 352 ~~g~~i 357 (630)
.+.+.
T Consensus 232 -~~~~~ 236 (240)
T 3eu9_A 232 -ARQAK 236 (240)
T ss_dssp -HC---
T ss_pred -hhhcc
Confidence 56544
No 35
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.3e-34 Score=283.09 Aligned_cols=218 Identities=21% Similarity=0.291 Sum_probs=177.2
Q ss_pred CCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHh
Q 006802 170 GHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLE 249 (630)
Q Consensus 170 g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~ 249 (630)
|+.+++++|++++. ......+.+|.||||+|+..|+.+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|++
T Consensus 2 g~~~~i~~Ll~~g~-~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 79 (223)
T 2f8y_A 2 DAPAVISDFIYQGA-SLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILIR 79 (223)
T ss_dssp ---CCEETTEETTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHcCC-CcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 56677777777622 22233467778888888888888888888877766 44567778888888888888888888888
Q ss_pred cCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCC
Q 006802 250 IDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNK 329 (630)
Q Consensus 250 ~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~ 329 (630)
.++...+..+..|.||||+|+..|+.+++++|++.++++... |..|.||||+|+..|+.+++++|++.+.++ +.+|..
T Consensus 80 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~ 157 (223)
T 2f8y_A 80 NRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAV-DDLGKSALHWAAAVNNVDAAVVLLKNGANK-DMQNNR 157 (223)
T ss_dssp BTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCB-CTTSCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTT
T ss_pred cCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCC
Confidence 877545667778888888888888888888888888877655 788888888888888888888888887765 888999
Q ss_pred CChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Q 006802 330 GNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSK 392 (630)
Q Consensus 330 G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~~~~ 392 (630)
|+||||+|+..|+.+++++|++ .|++++.+|..|.||+++|+..++.+++++|+++|+....
T Consensus 158 g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~~ 219 (223)
T 2f8y_A 158 EETPLFLAAREGSYETAKVLLD-HFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSP 219 (223)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSCC
T ss_pred CcCHHHHHHHcCCHHHHHHHHH-cCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCccc
Confidence 9999999999999999999999 8999999999999999999999999999999999997654
No 36
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=6.6e-34 Score=278.09 Aligned_cols=216 Identities=17% Similarity=0.202 Sum_probs=187.0
Q ss_pred CCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHH
Q 006802 131 GNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVL 210 (630)
Q Consensus 131 g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv 210 (630)
|+.+++++|++.+.+. ....|..|.||||+|+..|+.+++++|+++ +.+.+..+..|.||||+|+..|+.+++
T Consensus 2 g~~~~i~~Ll~~g~~~-----~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v 74 (223)
T 2f8y_A 2 DAPAVISDFIYQGASL-----HNQTDRTGETALHLAARYSRSDAAKRLLEA--SADANIQDNMGRTPLHAAVSADAQGVF 74 (223)
T ss_dssp ---CCEETTEETTCCT-----TCCCTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CcHHHHHHHHHcCCCc-----ccccCCCCCchHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 6777888888876642 344578899999999999999999999987 456677888899999999999999999
Q ss_pred HHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCc
Q 006802 211 KELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGF 290 (630)
Q Consensus 211 ~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~ 290 (630)
++|++.++......+..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|++.++++..
T Consensus 75 ~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 153 (223)
T 2f8y_A 75 QILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM 153 (223)
T ss_dssp HHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC-cCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999888667778889999999999999999999999998886 67788899999999999999999999999988876
Q ss_pred ccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCc
Q 006802 291 RTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDV 357 (630)
Q Consensus 291 ~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~i 357 (630)
. |..|.||||+|+..|+.+++++|++.++++ +.+|..|.||||+|+..++.+++++|++ .|+..
T Consensus 154 ~-~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~i~~~L~~-~g~~~ 217 (223)
T 2f8y_A 154 Q-NNREETPLFLAAREGSYETAKVLLDHFANR-DITDHMDRLPRDIAQERMHHDIVRLLDE-YNLVR 217 (223)
T ss_dssp C-CTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCSS
T ss_pred c-CCCCcCHHHHHHHcCCHHHHHHHHHcCCCC-ccccccCCCHHHHHHHhcchHHHHHHHH-cCCCc
Confidence 5 889999999999999999999999998876 8889999999999999999999999998 67654
No 37
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=4.8e-34 Score=290.77 Aligned_cols=228 Identities=15% Similarity=0.151 Sum_probs=203.4
Q ss_pred CCCCCCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCC
Q 006802 112 NKDSPGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPA 191 (630)
Q Consensus 112 ~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~ 191 (630)
+++.+|..|.||||+||..|+.++|++|++.+.+ ++.. +|.||||+|+..|+.+++++|+++ +.+++..+
T Consensus 23 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~d 92 (285)
T 3kea_A 23 DTFKADVHGHSASYYAIADNNVRLVCTLLNAGAL------KNLL--ENEFPLHQAATLEDTKIVKILLFS--GLDDSQFD 92 (285)
T ss_dssp TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGG------GSCC--TTCCHHHHHTTSSSCHHHHHHHHT--TCCTTCCC
T ss_pred CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC------CCCC--CCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCcC
Confidence 4788999999999999999999999999998654 3444 489999999999999999999998 56677889
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCC-ChHHHHHHHcCCHHHHHHHHhcCCchhhhhcc-CCCcHHHHH
Q 006802 192 RNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSC-STALHTAAAQGHIDVVNFLLEIDSNLAKIARN-NGKTVLHSA 269 (630)
Q Consensus 192 ~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g-~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~-~g~tpLh~A 269 (630)
..|.||||+|+..|+.+++++|++.+++ ++..+..| .||||+|+..|+.+++++|+++|++. .+. .|.||||+|
T Consensus 93 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~g~t~L~~A 168 (285)
T 3kea_A 93 DKGNTALYYAVDSGNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST---FDLAILLSCIHIT 168 (285)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHCGG-GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT---CCCSTHHHHHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCC-CCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc---ccccCCccHHHHH
Confidence 9999999999999999999999999888 45677788 89999999999999999999999876 233 899999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCcccCCCCCch-hhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHH
Q 006802 270 ARMGHLEVVKALVSKDPSTGFRTDKKGQTA-LHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRC 348 (630)
Q Consensus 270 a~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~-Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~ 348 (630)
+..|+.+++++|++.+++++.. |..|+|| ||+|+..|+.+++++|++.++++ +..| +.|+..|+.+++++
T Consensus 169 ~~~g~~~~v~~Ll~~gad~n~~-~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~-~~~~-------~~a~~~~~~~iv~~ 239 (285)
T 3kea_A 169 IKNGHVDMMILLLDYMTSTNTN-NSLLFIPDIKLAIDNKDIEMLQALFKYDINI-YSAN-------LENVLLDDAEIAKM 239 (285)
T ss_dssp HHTTCHHHHHHHHHHHHHTCTT-CCCBCCTTHHHHHHHTCHHHHHHHTTSCBCS-TTTT-------GGGGTTTCHHHHHH
T ss_pred HHcChHHHHHHHHHcCCCCCcc-cCCCCChHHHHHHHcCCHHHHHHHHHcCCCC-CCCC-------hhhhhcCCHHHHHH
Confidence 9999999999999999988765 8999998 99999999999999999998876 6666 36688999999999
Q ss_pred HhcccCCCcccccCC
Q 006802 349 LLSIEGIDVNSLNKA 363 (630)
Q Consensus 349 Ll~~~g~~in~~n~~ 363 (630)
|++ .|++++..+..
T Consensus 240 Ll~-~g~~~~~~~~~ 253 (285)
T 3kea_A 240 IIE-KHVEYKSDSYT 253 (285)
T ss_dssp HHH-HHHHHTTCTTT
T ss_pred HHH-cCCCCCCcccc
Confidence 999 78887765543
No 38
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=7.9e-34 Score=290.48 Aligned_cols=266 Identities=20% Similarity=0.211 Sum_probs=217.6
Q ss_pred HHHHcCCHHHHHHHHHhcChhhhh---HHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHH
Q 006802 126 LAARAGNLSRVMEILQSCDANEAK---DLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAA 202 (630)
Q Consensus 126 ~Aa~~g~~~~v~~Ll~~~~~~~~~---~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~ 202 (630)
.+++.|+.+.++.++......... ......+..|.||||.||..|+.++|++|+++ +.+++..+.+|.||||+|+
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~ 81 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLER--GADINYANVDGLTALHQAC 81 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHH--CCCTTCBCTTCCBHHHHHH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHH
Confidence 467778888888888765432110 01122345678999999999999999999998 4567778899999999999
Q ss_pred HcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHH
Q 006802 203 KQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALV 282 (630)
Q Consensus 203 ~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll 282 (630)
..|+.+++++|++.+++ ++..|..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.++++.++
T Consensus 82 ~~g~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~ll 159 (299)
T 1s70_B 82 IDDNVDMVKFLVENGAN-INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEEEAMEELLQNEV 159 (299)
T ss_dssp HTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCSHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHhcchHHHHHHHH
Confidence 99999999999999888 5667889999999999999999999999999987 678899999999999999999999988
Q ss_pred hCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccC
Q 006802 283 SKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNK 362 (630)
Q Consensus 283 ~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~ 362 (630)
..........+..+.++++ ..+..++..+.......+..|.||||+|+..|+.+++++|++ .|++++.+|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~d~~~~d~ 230 (299)
T 1s70_B 160 NRQGVDIEAARKEEERIML--------RDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQ-ARYDVNIKDY 230 (299)
T ss_dssp HHHTCCHHHHHHHHHHHHH--------HHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHT-TTCCTTCCCT
T ss_pred hhcCCCchhhhhhhhhHHH--------HHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHH-cCCCCCCcCC
Confidence 7533222222222333333 234455555555556678899999999999999999999999 8999999999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCchHHHH
Q 006802 363 AGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSATKQL 404 (630)
Q Consensus 363 ~G~TpL~~A~~~~~~~iv~~L~~~ga~~~~~~~~~~~~~~~l 404 (630)
.|.||||+|+..|+.+++++|+++|++....+..+.++....
T Consensus 231 ~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A 272 (299)
T 1s70_B 231 DGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVA 272 (299)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSC
T ss_pred CCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 999999999999999999999999999998888888876554
No 39
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=6.7e-34 Score=295.60 Aligned_cols=249 Identities=18% Similarity=0.167 Sum_probs=195.4
Q ss_pred ccccCCCCCCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhc-----------CCCCCCcHHHHHHHhCCHHHHH
Q 006802 108 ERKKNKDSPGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSK-----------KNQEGETPLYVAAESGHALIVE 176 (630)
Q Consensus 108 ~~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~-----------~n~~g~TpLh~Aa~~g~~eiv~ 176 (630)
+++.+++..+..|.|++| |+.++|+.||+.+.++....+... ......+.+|+|+..+..++++
T Consensus 40 ~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 114 (327)
T 1sw6_A 40 SSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVND 114 (327)
T ss_dssp TSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHH
T ss_pred hCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHH
Confidence 567788889999999988 999999999998754322221111 1112234468899999999999
Q ss_pred HHHhcCCcccccc-CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCC---HHHHHHHHhcCC
Q 006802 177 EMLQHMNLETASI-PARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGH---IDVVNFLLEIDS 252 (630)
Q Consensus 177 ~LL~~~~~~~~~~-~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~---~e~v~~LL~~~~ 252 (630)
.|++. +.+++. .+..|.||||+|+..|+.+++++|++++++ ++..|..|.||||+|+..|+ .++++.|++.+.
T Consensus 115 ~l~~~--g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad-~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~ 191 (327)
T 1sw6_A 115 AFPNT--QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN-RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLY 191 (327)
T ss_dssp HCTTS--CCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHG
T ss_pred HHHhc--CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhh
Confidence 99987 567777 799999999999999999999999999988 46789999999999999998 788888888874
Q ss_pred chhhhhccCCCcHHHHHHH----cCCHHHHHHHHhC--------------------CCCCCcccCCCCCchhhhhccCCC
Q 006802 253 NLAKIARNNGKTVLHSAAR----MGHLEVVKALVSK--------------------DPSTGFRTDKKGQTALHMAVKGQN 308 (630)
Q Consensus 253 ~~~~~~d~~g~tpLh~Aa~----~g~~~iv~~Ll~~--------------------~~~~~~~~d~~g~t~Lh~Aa~~g~ 308 (630)
...+..|..|.||||+|+. .|+.+++++|++. +.++... +..|.||||.|+.
T Consensus 192 ~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~-~~~g~t~L~~a~~--- 267 (327)
T 1sw6_A 192 PCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDK-NGERKDSILENLD--- 267 (327)
T ss_dssp GGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------CHHHHHCS---
T ss_pred ccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccc-cccCCChhHHHHH---
Confidence 4457889999999999999 8999999999987 6666654 8999999999996
Q ss_pred HHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcC
Q 006802 309 EDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLG 375 (630)
Q Consensus 309 ~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~ 375 (630)
+++|++.+ ++.+|.+|+||||+|+..|+.++|++|++ .|++++.+|..|+||||+|+..|
T Consensus 268 ---~~~Ll~~~---~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~-~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 268 ---LKWIIANM---LNAQDSNGDTCLNIAARLGNISIVDALLD-YGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp ---HHHHHHHT---TTCCCTTSCCHHHHHHHHCCHHHHHHHHH-TTCCTTCCCTTSCCGGGGTCC--
T ss_pred ---HHHHHHhC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHhcC
Confidence 88888873 58899999999999999999999999999 89999999999999999998653
No 40
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.3e-33 Score=278.86 Aligned_cols=219 Identities=21% Similarity=0.287 Sum_probs=152.1
Q ss_pred CCCCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCC
Q 006802 114 DSPGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARN 193 (630)
Q Consensus 114 ~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~ 193 (630)
+.+|.+|.||||+|+..|+.+++++|++.+... ...++.+|..|.||||+|+..|+.++|++|+++ +.+++..+..
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~ 77 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGD--LAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA--GCDPELRDFR 77 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-------CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSC--CCCSCCCCTT
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhcc--HHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCC
Confidence 346777888888888888888888888765421 123667777888888888888888888888876 4556667777
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCC-----ccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhcc-CCCcHHH
Q 006802 194 GYDSFHVAAKQGHLEVLKELLGEFPN-----LVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARN-NGKTVLH 267 (630)
Q Consensus 194 g~t~Lh~A~~~g~~eiv~~Ll~~~~~-----~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~-~g~tpLh 267 (630)
|.||||+|+..|+.+++++|++.++. .....+..|.||||+|+..|+.+++++|+++|+++ +..+. .|.||||
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~ 156 (236)
T 1ikn_D 78 GNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADV-NAQEPCNGRTALH 156 (236)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCCHHH
Confidence 88888888888888888888877653 24556667777777777777777777777777776 44554 7777777
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcc-cccCCCCChHHHHHH
Q 006802 268 SAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVL-KLEDNKGNTALHIAI 338 (630)
Q Consensus 268 ~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~-n~~d~~G~TpLh~A~ 338 (630)
+|+..|+.+++++|++.++++... |..|.||||+|+..++.+++++|++.+++.. ...+..|.||.+.+.
T Consensus 157 ~A~~~~~~~~v~~Ll~~ga~~~~~-~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 227 (236)
T 1ikn_D 157 LAVDLQNPDLVSLLLKCGADVNRV-TYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTES 227 (236)
T ss_dssp HHHHTTCHHHHHHHHTTTCCSCCC-CTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC-
T ss_pred HHHHcCCHHHHHHHHHcCCCCCcc-cCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhc
Confidence 777777777777777777776654 6777777777777777777777777776542 355666666655443
No 41
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=6.6e-34 Score=280.99 Aligned_cols=214 Identities=24% Similarity=0.277 Sum_probs=142.5
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHhcCCc--cccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChH
Q 006802 154 KKNQEGETPLYVAAESGHALIVEEMLQHMNL--ETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTA 231 (630)
Q Consensus 154 ~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~--~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tp 231 (630)
.+|..|.||||+|+..|+.+++++|++.... ..++..+..|.||||+|+..|+.+++++|++.+.+ ++..|..|.||
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~ 81 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD-PELRDFRGNTP 81 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC-SCCCCTTCCCH
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCH
Confidence 4577888888888888888888888887432 24666777788888888888888888888887776 45567778888
Q ss_pred HHHHHHcCCHHHHHHHHhcCCch-----hhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCC-CCCchhhhhcc
Q 006802 232 LHTAAAQGHIDVVNFLLEIDSNL-----AKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDK-KGQTALHMAVK 305 (630)
Q Consensus 232 L~~Aa~~g~~e~v~~LL~~~~~~-----~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~-~g~t~Lh~Aa~ 305 (630)
||+|+..|+.+++++|++.+++. ....+..|.||||+|+..|+.+++++|++.++++... +. .|.||||+|+.
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~~g~tpL~~A~~ 160 (236)
T 1ikn_D 82 LHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQ-EPCNGRTALHLAVD 160 (236)
T ss_dssp HHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCC-CTTTCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC-CCCCCCCHHHHHHH
Confidence 88888888888888888877532 2445566777777777777777777777766666544 33 56666666666
Q ss_pred CCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcc--cccCCCCCHHHHH
Q 006802 306 GQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVN--SLNKAGESPLDVA 371 (630)
Q Consensus 306 ~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in--~~n~~G~TpL~~A 371 (630)
.|+.+++++|++.++++ +.+|..|+||||+|+..|+.+++++|++ .|++.. ..+..|.||.+.+
T Consensus 161 ~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~~~~~Ll~-~ga~~~~~~~~~~~~~~~~~~ 226 (236)
T 1ikn_D 161 LQNPDLVSLLLKCGADV-NRVTYQGYSPYQLTWGRPSTRIQQQLGQ-LTLENLQMLPESEDEESYDTE 226 (236)
T ss_dssp TTCHHHHHHHHTTTCCS-CCCCTTCCCGGGGCTTSSCHHHHHHHHT-TSCGGGSSCCCCCTTTCCCCC
T ss_pred cCCHHHHHHHHHcCCCC-CcccCCCCCHHHHHHccCchHHHHHHHH-cchhhhhcCCccchHHHHhhh
Confidence 66666666666665554 5556666666666666666666666666 555544 4555555555443
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=3.4e-32 Score=267.73 Aligned_cols=210 Identities=25% Similarity=0.285 Sum_probs=149.5
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc----ccCCCCCChHHH
Q 006802 158 EGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLV----MTTDLSCSTALH 233 (630)
Q Consensus 158 ~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~----~~~d~~g~tpL~ 233 (630)
.|+||||+|+..|+.+++++|++.. +.+++..+..|.||||+|+..|+.+++++|++.+++.. ...|..|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFE-GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTT-CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 4677777777777777777777752 34556667777777777777777777777777766542 334556777777
Q ss_pred HHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHH
Q 006802 234 TAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVL 313 (630)
Q Consensus 234 ~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~ 313 (630)
+|+..|+.+++++|+++|+++ +..+.. +.++ . .. ...|..|.||||+|+..|+.++++
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~-~~~~~~--~~~~----------------~--~~-~~~~~~g~t~L~~A~~~~~~~~v~ 138 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGASV-SARATG--SVFH----------------Y--RP-HNLIYYGEHPLSFAACVGSEEIVR 138 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT-TCCCCS--GGGS----------------C--CT-TCSCCCCSSHHHHHHHHTCHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCC-CcccCC--ccee----------------e--cc-cccccCCCCHHHHHHHcCCHHHHH
Confidence 777777777777777776665 222221 1100 0 01 112557888888888888888888
Q ss_pred HhhcCCCCcccccCCCCChHHHHHHHhCcHHHH----HHHhcccCCCc------ccccCCCCCHHHHHHHcCCHHHHHHH
Q 006802 314 ELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIV----RCLLSIEGIDV------NSLNKAGESPLDVAEKLGNTELFSLL 383 (630)
Q Consensus 314 ~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv----~~Ll~~~g~~i------n~~n~~G~TpL~~A~~~~~~~iv~~L 383 (630)
+|++.+.++ +.+|.+|+||||+|+..|+.+++ ++|++ .|+++ +.+|..|.||||+|+..|+.+++++|
T Consensus 139 ~Ll~~ga~~-~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~-~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~L 216 (232)
T 2rfa_A 139 LLIEHGADI-RAQDSLGNTVLHILILQPNKTFACQMYNLLLS-YDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHL 216 (232)
T ss_dssp HHHHTTCCT-TCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHH-TTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHCCCCC-CCCCCCCCCHHHHHHHcCChHHHHHHHHHHHh-cCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 888887765 77888888888888888888877 88887 77776 57888888888888888888888888
Q ss_pred HHcCCCCcc
Q 006802 384 KEAGAAHSK 392 (630)
Q Consensus 384 ~~~ga~~~~ 392 (630)
+++|+....
T Consensus 217 l~~g~~~~~ 225 (232)
T 2rfa_A 217 MQKRKHIAA 225 (232)
T ss_dssp HHHHHHC--
T ss_pred HhcCccchh
Confidence 888876543
No 43
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=6.3e-32 Score=259.53 Aligned_cols=194 Identities=21% Similarity=0.272 Sum_probs=154.0
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHH
Q 006802 192 RNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAAR 271 (630)
Q Consensus 192 ~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~ 271 (630)
..+.||||.|+..|+.+.++.|+..++..++..|..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~ 81 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAGA 81 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHH
Confidence 346677777777777777777777776446666777788888888888888888888887776 5667778888888888
Q ss_pred cCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCc-----HHHH
Q 006802 272 MGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGR-----TQIV 346 (630)
Q Consensus 272 ~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~-----~~iv 346 (630)
.|+.+++++|++.+.......|..|.||||+|+..|+.+++++|++.+...++.+|..|+||||+|+..++ .+++
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v 161 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIV 161 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHH
Confidence 88888888888544433334477888888888888888888888888755558888889999999998887 8899
Q ss_pred HHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 006802 347 RCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAG 387 (630)
Q Consensus 347 ~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~g 387 (630)
++|++ .|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 162 ~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 162 KLLME-NGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHH-CCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 99998 78999999999999999999999999999998876
No 44
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=5.2e-32 Score=266.39 Aligned_cols=212 Identities=18% Similarity=0.232 Sum_probs=162.3
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCcc---ccccCCCCCC
Q 006802 119 RGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLE---TASIPARNGY 195 (630)
Q Consensus 119 ~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~---~~~~~~~~g~ 195 (630)
.|+||||.||+.|+.+++++|++.... .++.+|..|+||||+|+..|+.+++++|++++... ..+..+..|.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~-----~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~ 76 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGC-----EVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQ 76 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCS-----CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCC-----CcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCc
Confidence 589999999999999999999987653 37889999999999999999999999999984321 1155677899
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCH
Q 006802 196 DSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHL 275 (630)
Q Consensus 196 t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~ 275 (630)
||||+|+..|+.+++++|++.+++... .+.. +.+. .. .+..|..|.||||+|+..|+.
T Consensus 77 t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~--~~~~------------------~~-~~~~~~~g~t~L~~A~~~~~~ 134 (232)
T 2rfa_A 77 TALHIAVINQNVNLVRALLARGASVSA-RATG--SVFH------------------YR-PHNLIYYGEHPLSFAACVGSE 134 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTC-CCCS--GGGS------------------CC-TTCSCCCCSSHHHHHHHHTCH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCc-ccCC--ccee------------------ec-ccccccCCCCHHHHHHHcCCH
Confidence 999999999999999999999988533 3321 1110 01 123455677777777777777
Q ss_pred HHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHH----HHhhcCCCCcc-----cccCCCCChHHHHHHHhCcHHHH
Q 006802 276 EVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIV----LELIRPDPSVL-----KLEDNKGNTALHIAIKKGRTQIV 346 (630)
Q Consensus 276 ~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv----~~Ll~~~~~~~-----n~~d~~G~TpLh~A~~~g~~~iv 346 (630)
+++++|++.+++++.. |..|.||||+|+..++.+++ ++|++.+++.. +.+|..|+||||+|+..|+.+++
T Consensus 135 ~~v~~Ll~~ga~~~~~-d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v 213 (232)
T 2rfa_A 135 EIVRLLIEHGADIRAQ-DSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMF 213 (232)
T ss_dssp HHHHHHHHTTCCTTCC-CTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHH
Confidence 7777777777766654 67777777777777777766 77777766542 67889999999999999999999
Q ss_pred HHHhcccCCCccc
Q 006802 347 RCLLSIEGIDVNS 359 (630)
Q Consensus 347 ~~Ll~~~g~~in~ 359 (630)
++|++ +|.+...
T Consensus 214 ~~Ll~-~g~~~~~ 225 (232)
T 2rfa_A 214 QHLMQ-KRKHIAA 225 (232)
T ss_dssp HHHHH-HHHHC--
T ss_pred HHHHh-cCccchh
Confidence 99998 5554433
No 45
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=1.2e-30 Score=250.63 Aligned_cols=189 Identities=25% Similarity=0.309 Sum_probs=97.5
Q ss_pred CCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHc
Q 006802 159 GETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQ 238 (630)
Q Consensus 159 g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~ 238 (630)
+.||||.|+..|+.+.++.|+... ..+++..+.+|.||||+|+..|+.+++++|++.+.+ ++..|..|.||||+|+..
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~ 82 (201)
T 3hra_A 5 EVGALLEAANQRDTKKVKEILQDT-TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD-INLQNSISDSPYLYAGAQ 82 (201)
T ss_dssp CTTHHHHHHHTTCHHHHHHHHTCT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHT
T ss_pred cccHHHHHHHhccHHHHHHHHHcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHc
Confidence 344444444444444444444431 123333444444444444444444444444444444 233444445555555555
Q ss_pred CCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCC-CCCCcccCCCCCchhhhhccCCC-----HHHH
Q 006802 239 GHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKD-PSTGFRTDKKGQTALHMAVKGQN-----EDIV 312 (630)
Q Consensus 239 g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~-~~~~~~~d~~g~t~Lh~Aa~~g~-----~~iv 312 (630)
|+.+++++|++.+....+..+..|.||||+|+..|+.+++++|++.+ .++. ..|..|+||||+|+..++ .+++
T Consensus 83 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~~~v 161 (201)
T 3hra_A 83 GRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDID-FQNDFGYTALIEAVGLREGNQLYQDIV 161 (201)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTT-CCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred CCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcC-CCCCCCCCHHHHHHHhccchhhHHHHH
Confidence 55555555553333222444455555555555555555555555555 2332 235555555555555555 5666
Q ss_pred HHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhc
Q 006802 313 LELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLS 351 (630)
Q Consensus 313 ~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 351 (630)
++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++
T Consensus 162 ~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 199 (201)
T 3hra_A 162 KLLMENGADQ-SIKDNSGRTAMDYANQKGYTEISKILAQ 199 (201)
T ss_dssp HHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred HHHHHCCCCC-CccCCCCCCHHHHHHHcCCHhHHHHHHh
Confidence 6666665554 6666677777777777777777777766
No 46
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=1.4e-31 Score=270.56 Aligned_cols=215 Identities=17% Similarity=0.207 Sum_probs=143.1
Q ss_pred hhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCC--ccccc----cCCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCccc
Q 006802 152 LSKKNQEGETPLYVAAESGHALIVEEMLQHMN--LETAS----IPARNGYDSFHVAAKQ---GHLEVLKELLGEFPNLVM 222 (630)
Q Consensus 152 l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~--~~~~~----~~~~~g~t~Lh~A~~~---g~~eiv~~Ll~~~~~~~~ 222 (630)
.+..|..|.||||+|+..|+.++|+.|++.+. ...++ ..+..|.||||+|+.. |+.+++++|++.+++...
T Consensus 6 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~ 85 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDS 85 (273)
T ss_dssp -----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTC
T ss_pred CCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccc
Confidence 34566677777777777777777777766421 11111 2345556666666654 555666655555432100
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc----------
Q 006802 223 TTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRT---------- 292 (630)
Q Consensus 223 ~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~---------- 292 (630)
++.++..+. ...|..|.||||+|+..|+.+++++|++.++++....
T Consensus 86 ---------------------~~~~i~~~~---~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~ 141 (273)
T 2pnn_A 86 ---------------------LKQFVNASY---TDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKG 141 (273)
T ss_dssp ---------------------HHHHHTCCC---CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSS
T ss_pred ---------------------hhHHhhccc---ccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccc
Confidence 000111000 0133456666666666666666666666666655431
Q ss_pred ---CCCCCchhhhhccCCCHHHHHHhhc---CCCCcccccCCCCChHHHHHHHhCc---------HHHHHHHhcccCCCc
Q 006802 293 ---DKKGQTALHMAVKGQNEDIVLELIR---PDPSVLKLEDNKGNTALHIAIKKGR---------TQIVRCLLSIEGIDV 357 (630)
Q Consensus 293 ---d~~g~t~Lh~Aa~~g~~~iv~~Ll~---~~~~~~n~~d~~G~TpLh~A~~~g~---------~~iv~~Ll~~~g~~i 357 (630)
+..|.||||+|+..|+.+++++|++ .+.++ +.+|.+|+||||+|+..|+ .+++++|++ .|+++
T Consensus 142 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~-~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~-~ga~~ 219 (273)
T 2pnn_A 142 RPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADI-SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILI-LGAKL 219 (273)
T ss_dssp SCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HHHHH
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCc-eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHH-hhhhc
Confidence 2379999999999999999999999 66665 8899999999999999988 899999999 79998
Q ss_pred c-------cccCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCcc
Q 006802 358 N-------SLNKAGESPLDVAEKLGNTELFSLLKEAGA-AHSK 392 (630)
Q Consensus 358 n-------~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga-~~~~ 392 (630)
+ .+|..|.||||+|+..|+.+++++|+++|| ++..
T Consensus 220 n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~ 262 (273)
T 2pnn_A 220 HPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPEC 262 (273)
T ss_dssp CTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC----
T ss_pred ccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchh
Confidence 6 489999999999999999999999999999 4443
No 47
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=2.3e-31 Score=266.10 Aligned_cols=164 Identities=26% Similarity=0.329 Sum_probs=122.1
Q ss_pred CCCCCChHHHHHHHc---CCHHHHHHHHhcCCchhh----------hhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCc
Q 006802 224 TDLSCSTALHTAAAQ---GHIDVVNFLLEIDSNLAK----------IARNNGKTVLHSAARMGHLEVVKALVSKDPSTGF 290 (630)
Q Consensus 224 ~d~~g~tpL~~Aa~~---g~~e~v~~LL~~~~~~~~----------~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~ 290 (630)
.|..|.||||+|+.. |+.+++++|++.|++... ..|..|.||||+|+..|+.+++++|++.+++++.
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 118 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL 118 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 344444555555544 455555555544433211 1124466666666666666666666666666554
Q ss_pred ccCC-------------CCCchhhhhccCCCHHHHHHhhc---CCCCcccccCCCCChHHHHHHH--hCcHH-------H
Q 006802 291 RTDK-------------KGQTALHMAVKGQNEDIVLELIR---PDPSVLKLEDNKGNTALHIAIK--KGRTQ-------I 345 (630)
Q Consensus 291 ~~d~-------------~g~t~Lh~Aa~~g~~~iv~~Ll~---~~~~~~n~~d~~G~TpLh~A~~--~g~~~-------i 345 (630)
. +. .|.||||+|+..|+.+++++|++ .+.++ +.+|.+|+||||+|+. .++.+ +
T Consensus 119 ~-~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~-n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~i 196 (256)
T 2etb_A 119 R-ACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASL-EATDSLGNTVLHALVMIADNSPENSALVIHM 196 (256)
T ss_dssp C-CCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHH
T ss_pred c-cccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCc-CccCCCCCCHHHHHHHcccCCchhhHHHHHH
Confidence 3 33 39999999999999999999999 66665 8899999999999999 78888 9
Q ss_pred HHHHhcccCCCc-------ccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Q 006802 346 VRCLLSIEGIDV-------NSLNKAGESPLDVAEKLGNTELFSLLKEAGAAH 390 (630)
Q Consensus 346 v~~Ll~~~g~~i-------n~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~~ 390 (630)
+++|++ .|+++ +.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus 197 v~~Ll~-~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 197 YDGLLQ-MGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp HHHHHH-HHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHH-cCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 999999 89999 999999999999999999999999999998764
No 48
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=1.1e-31 Score=271.24 Aligned_cols=228 Identities=21% Similarity=0.278 Sum_probs=145.5
Q ss_pred ccCCCCCCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhh----cCCCCCCcHHHHHHHh---CCHHHHHHHHhcC
Q 006802 110 KKNKDSPGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLS----KKNQEGETPLYVAAES---GHALIVEEMLQHM 182 (630)
Q Consensus 110 ~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~----~~n~~g~TpLh~Aa~~---g~~eiv~~LL~~~ 182 (630)
.+..+..|..|.||||.||+.|+.++|+.|++.+.... ..++ ..|..|.||||+|+.. |+.++|++|++++
T Consensus 3 ~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~g 80 (273)
T 2pnn_A 3 SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSK--KRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVA 80 (273)
T ss_dssp --------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSC--CCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHH
T ss_pred cccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcc--cccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhh
Confidence 34567889999999999999999999999998765431 2222 3478999999999987 9999999999983
Q ss_pred CccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhcc--
Q 006802 183 NLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARN-- 260 (630)
Q Consensus 183 ~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~-- 260 (630)
.. .. .++.+++... ...|..|.||||+|+..|+.+++++|+++|+++ +..+.
T Consensus 81 a~--~~--------------------~~~~~i~~~~---~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~ 134 (273)
T 2pnn_A 81 RK--TD--------------------SLKQFVNASY---TDSYYKGQTALHIAIERRNMTLVTLLVENGADV-QAAANGD 134 (273)
T ss_dssp HH--TT--------------------CHHHHHTCCC---CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBCSG
T ss_pred cc--cc--------------------chhHHhhccc---ccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-Ccccccc
Confidence 21 10 0112222111 112345555555555555555555555555554 33333
Q ss_pred ------------CCCcHHHHHHHcCCHHHHHHHHh---CCCCCCcccCCCCCchhhhhccCCC---------HHHHHHhh
Q 006802 261 ------------NGKTVLHSAARMGHLEVVKALVS---KDPSTGFRTDKKGQTALHMAVKGQN---------EDIVLELI 316 (630)
Q Consensus 261 ------------~g~tpLh~Aa~~g~~~iv~~Ll~---~~~~~~~~~d~~g~t~Lh~Aa~~g~---------~~iv~~Ll 316 (630)
.|.||||+|+..|+.+++++|++ .+.+++.. |..|+||||+|+..|+ .+++++|+
T Consensus 135 ~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~-d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll 213 (273)
T 2pnn_A 135 FFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISAR-DSVGNTVLHALVEVADNTVDNTKFVTSMYNEIL 213 (273)
T ss_dssp GGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCC-CTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceee-CCCCCcHHHHHHHccCcchhHHHHHHHHHHHHH
Confidence 57777777777777777777777 66666554 6777777777777666 67777777
Q ss_pred cCCCCcc------cccCCCCChHHHHHHHhCcHHHHHHHhcccCC-CcccccCCCCCH
Q 006802 317 RPDPSVL------KLEDNKGNTALHIAIKKGRTQIVRCLLSIEGI-DVNSLNKAGESP 367 (630)
Q Consensus 317 ~~~~~~~------n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~-~in~~n~~G~Tp 367 (630)
+.++++. +.+|.+|+||||+|+..|+.+++++|++ .|+ |+......+.+|
T Consensus 214 ~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~-~ga~dp~~~~~~~~~~ 270 (273)
T 2pnn_A 214 ILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQ-REIHEPECRHAAAHHH 270 (273)
T ss_dssp HHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHH-HHTC------------
T ss_pred HhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHH-CCCCCchhhhhhhhhc
Confidence 7665542 4588999999999999999999999998 666 777666666555
No 49
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=2.9e-30 Score=241.28 Aligned_cols=158 Identities=37% Similarity=0.566 Sum_probs=138.7
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCH
Q 006802 230 TALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNE 309 (630)
Q Consensus 230 tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~ 309 (630)
++|+.|+..|+.++|+.|++.|+++ +..|.+|.||||+|+..|+.++++.|++.++++... |..|+||||+|+..|+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadv-n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~-d~~g~TpLh~A~~~g~~ 83 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAK-DSDGRTPLHHAAENGHK 83 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhh-ccCCCCHHHHHHHcCCH
Confidence 5788899999999999999998887 778888999999999999999999999998888765 88899999999999999
Q ss_pred HHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 006802 310 DIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAA 389 (630)
Q Consensus 310 ~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~ 389 (630)
+++++|++.++++ |.+|.+|+||||+|+..|+.++|++|++ .|++++.+|..|+|||++|+..|+.+++++|+++||+
T Consensus 84 ~~v~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~-~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ 161 (169)
T 4gpm_A 84 EVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLIS-KGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGW 161 (169)
T ss_dssp HHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC---
T ss_pred HHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 9999999988876 8889999999999999999999999998 8999999999999999999999999999999999997
Q ss_pred Cc
Q 006802 390 HS 391 (630)
Q Consensus 390 ~~ 391 (630)
..
T Consensus 162 ie 163 (169)
T 4gpm_A 162 LE 163 (169)
T ss_dssp --
T ss_pred cC
Confidence 64
No 50
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=7.4e-32 Score=280.19 Aligned_cols=262 Identities=16% Similarity=0.115 Sum_probs=199.4
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCcccccc-------
Q 006802 117 GKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASI------- 189 (630)
Q Consensus 117 ~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~------- 189 (630)
+..+.+|+|. ...++|++|++.+.+ ++..+..|.|+++ |+.++|++||+++.......
T Consensus 20 ~~~~~~~~~~----~~~dlv~~ll~~ga~------i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~ 84 (327)
T 1sw6_A 20 NDRTAGPIIT----FTHDLTSDFLSSPLK------IMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNN 84 (327)
T ss_dssp -----CCEEE----CCTTCCCSTTTSSCC------CEECBCCCCCCCH-----HHHHHHHHHHHHHHC------------
T ss_pred ccccccchhh----hcCchHHHHhhCCcc------cccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhc
Confidence 4556667773 556789999998764 6788899999988 99999999998842211100
Q ss_pred --------CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccC
Q 006802 190 --------PARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNN 261 (630)
Q Consensus 190 --------~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~ 261 (630)
......+.+|.|+..+..++++.|++.+.++....|..|.||||+|+..|+.++|++|+++|+++ +..|.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~ 163 (327)
T 1sw6_A 85 DSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNM 163 (327)
T ss_dssp -------------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTT
T ss_pred ccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCC
Confidence 01111233578888888899999999988854437999999999999999999999999999998 788999
Q ss_pred CCcHHHHHHHcCC---HHHHHHHHhCCCCCCcccCCCCCchhhhhcc----CCCHHHHHHhhcCC---------------
Q 006802 262 GKTVLHSAARMGH---LEVVKALVSKDPSTGFRTDKKGQTALHMAVK----GQNEDIVLELIRPD--------------- 319 (630)
Q Consensus 262 g~tpLh~Aa~~g~---~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~----~g~~~iv~~Ll~~~--------------- 319 (630)
|.||||+|+..|+ .++++.|++.+.......|..|+||||+|+. .|+.+++++|++.+
T Consensus 164 g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~ 243 (327)
T 1sw6_A 164 GESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSG 243 (327)
T ss_dssp CCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC
T ss_pred CCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhh
Confidence 9999999999998 6777777777633334459999999999999 89999999998762
Q ss_pred ----CCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Q 006802 320 ----PSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHG 395 (630)
Q Consensus 320 ----~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~~~~~~~ 395 (630)
...++.+|..|.||||.|+. +++|++. ++|.+|..|+||||+|+..|+.+++++|+++|+++...+.
T Consensus 244 ~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~ 314 (327)
T 1sw6_A 244 TNEKESKPNDKNGERKDSILENLD------LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANK 314 (327)
T ss_dssp ----------------CHHHHHCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCT
T ss_pred hhcccCCcccccccCCChhHHHHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 23348899999999999986 8999984 6899999999999999999999999999999999999888
Q ss_pred CCCchHHH
Q 006802 396 KPPSATKQ 403 (630)
Q Consensus 396 ~~~~~~~~ 403 (630)
.+.+|...
T Consensus 315 ~G~TpL~~ 322 (327)
T 1sw6_A 315 SGLRPVDF 322 (327)
T ss_dssp TSCCGGGG
T ss_pred CCCCHHHH
Confidence 88887643
No 51
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.6e-30 Score=260.01 Aligned_cols=208 Identities=22% Similarity=0.281 Sum_probs=126.4
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhc----CCCCCCcHHHHHHHh---CCHHHHHHHHhcCCccccccCCC
Q 006802 120 GDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSK----KNQEGETPLYVAAES---GHALIVEEMLQHMNLETASIPAR 192 (630)
Q Consensus 120 g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~----~n~~g~TpLh~Aa~~---g~~eiv~~LL~~~~~~~~~~~~~ 192 (630)
|.||||.||+.|+.+.|+.|++..... ...++. .|..|.||||+|+.. |+.++|++|++.+ .+.+..+
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~--g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g--~~~~~~~- 76 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWN--SKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQID--KDSGNPK- 76 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHH--TCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHH--HHTTCSS-
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHc--CCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcC--Ccccchh-
Confidence 566666666666665444444321111 222343 555666666666666 6666666666552 1111000
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccC-----------
Q 006802 193 NGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNN----------- 261 (630)
Q Consensus 193 ~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~----------- 261 (630)
.++.. .....|..|.||||+|+..|+.+++++|+++|+++ +..+..
T Consensus 77 -------------------~~~~~---~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~ 133 (256)
T 2etb_A 77 -------------------PLVNA---QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRACGRFFQKHQGTCF 133 (256)
T ss_dssp -------------------CGGGC---CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCC
T ss_pred -------------------hhccc---ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-Ccccccccccccccccc
Confidence 00000 00112344556666666666666666666665554 333333
Q ss_pred --CCcHHHHHHHcCCHHHHHHHHh---CCCCCCcccCCCCCchhhhhcc--CCCHH-------HHHHhhcCCCCcc----
Q 006802 262 --GKTVLHSAARMGHLEVVKALVS---KDPSTGFRTDKKGQTALHMAVK--GQNED-------IVLELIRPDPSVL---- 323 (630)
Q Consensus 262 --g~tpLh~Aa~~g~~~iv~~Ll~---~~~~~~~~~d~~g~t~Lh~Aa~--~g~~~-------iv~~Ll~~~~~~~---- 323 (630)
|.||||+|+..|+.+++++|++ .+++++.. |..|+||||+|+. .++.+ ++++|++.++++.
T Consensus 134 ~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~-d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~ 212 (256)
T 2etb_A 134 YFGELPLSLAACTKQWDVVTYLLENPHQPASLEAT-DSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQ 212 (256)
T ss_dssp CSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCC-CTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCC
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCcc-CCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccc
Confidence 7777777777777777777777 66666654 7777777777776 66666 7788877765542
Q ss_pred --cccCCCCChHHHHHHHhCcHHHHHHHhcccCCCc
Q 006802 324 --KLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDV 357 (630)
Q Consensus 324 --n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~i 357 (630)
+.+|.+|+||||+|+..|+.+++++|++ +|.+.
T Consensus 213 ~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~-~g~~~ 247 (256)
T 2etb_A 213 LEEISNHQGLTPLKLAAKEGKIEIFRHILQ-REFSG 247 (256)
T ss_dssp GGGCCCTTSCCHHHHHHHTTCHHHHHHHHH-HHHHH
T ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHh-CCCCC
Confidence 7789999999999999999999999998 55443
No 52
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=4e-29 Score=233.55 Aligned_cols=159 Identities=32% Similarity=0.483 Sum_probs=121.5
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCH
Q 006802 196 DSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHL 275 (630)
Q Consensus 196 t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~ 275 (630)
++|+.|+..|+.++|+.|++.+++ ++..|..|.||||+|+..++.+++++|++.|+++ +..|.+|.||||+|+..|+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gad-vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~~ 83 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGAD-VNASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHK 83 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCCH
Confidence 357777777777777777777776 4566777788888888888888888888877776 66777788888888888888
Q ss_pred HHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCC
Q 006802 276 EVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGI 355 (630)
Q Consensus 276 ~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~ 355 (630)
+++++|++.+++++.. |..|+||||+|+..|+.+++++|++.++++ +.+|.+|+||||+|+..|+.+++++|++ .|+
T Consensus 84 ~~v~~Ll~~gadvn~~-d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~g~~~iv~~Ll~-~GA 160 (169)
T 4gpm_A 84 EVVKLLISKGADVNAK-DSDGRTPLHHAAENGHKEVVKLLISKGADV-NTSDSDGRTPLDLAREHGNEEVVKLLEK-QGG 160 (169)
T ss_dssp HHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHT-C--
T ss_pred HHHHHHHHCcCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHH-CCC
Confidence 8888888888777654 778888888888888888888888887765 7788888888888888888888888888 788
Q ss_pred Cccc
Q 006802 356 DVNS 359 (630)
Q Consensus 356 ~in~ 359 (630)
+++.
T Consensus 161 ~ie~ 164 (169)
T 4gpm_A 161 WLEH 164 (169)
T ss_dssp ----
T ss_pred CcCC
Confidence 7754
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=3.5e-30 Score=258.04 Aligned_cols=164 Identities=26% Similarity=0.319 Sum_probs=125.2
Q ss_pred CCCChHHHHHH---HcCCHHHHHHHHhcCCch----------hhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCccc
Q 006802 226 LSCSTALHTAA---AQGHIDVVNFLLEIDSNL----------AKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRT 292 (630)
Q Consensus 226 ~~g~tpL~~Aa---~~g~~e~v~~LL~~~~~~----------~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~ 292 (630)
..|.||||+|+ ..|+.+++++|++.|++. ....|..|.||||+|+..|+.+++++|++.+++++..
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~- 122 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ- 122 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCC-
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcc-
Confidence 34445555444 334555555555443321 1222346777777777777777777777777766654
Q ss_pred C--------------CCCCchhhhhccCCCHHHHHHhhc---CCCCcccccCCCCChHHHHHHHhCc---------HHHH
Q 006802 293 D--------------KKGQTALHMAVKGQNEDIVLELIR---PDPSVLKLEDNKGNTALHIAIKKGR---------TQIV 346 (630)
Q Consensus 293 d--------------~~g~t~Lh~Aa~~g~~~iv~~Ll~---~~~~~~n~~d~~G~TpLh~A~~~g~---------~~iv 346 (630)
+ ..|.||||+|+..|+.+++++|++ .+.++ +.+|.+|+||||+|+..++ .+++
T Consensus 123 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~-~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v 201 (260)
T 3jxi_A 123 ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADL-RRQDSRGNTVLHALVAIADNTRENTKFVTKMY 201 (260)
T ss_dssp CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT-TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHH
T ss_pred ccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCC-cccCCCCCcHHHHHHHhccCchhHHHHHHHHH
Confidence 3 579999999999999999999999 66665 8999999999999998887 7999
Q ss_pred HHHhcccCCCc-------ccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Q 006802 347 RCLLSIEGIDV-------NSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSK 392 (630)
Q Consensus 347 ~~Ll~~~g~~i-------n~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~~~~ 392 (630)
++|++ .|+++ +..|..|.||||+|+..|+.+++++|+++|++...
T Consensus 202 ~~Ll~-~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~ 253 (260)
T 3jxi_A 202 DLLLI-KCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAA 253 (260)
T ss_dssp HHHHH-HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHHC
T ss_pred HHHHH-hCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCccc
Confidence 99999 88998 77999999999999999999999999999987543
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=9.3e-30 Score=254.92 Aligned_cols=210 Identities=20% Similarity=0.211 Sum_probs=130.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCC----CCCCcHHHHHH---HhCCHHHHHHHHhcCCcccccc
Q 006802 117 GKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKN----QEGETPLYVAA---ESGHALIVEEMLQHMNLETASI 189 (630)
Q Consensus 117 ~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n----~~g~TpLh~Aa---~~g~~eiv~~LL~~~~~~~~~~ 189 (630)
+..|.|+||.||+.|+.+.++.|++..... ...++..+ ..|.||||+|+ ..|+.++|++|++.+....
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~--~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~--- 76 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTH--KKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTG--- 76 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHH--TCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTT---
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhc--CCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhccccc---
Confidence 455666777777777766666666532111 11122222 44666666666 4566666666666521100
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhc----------
Q 006802 190 PARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIAR---------- 259 (630)
Q Consensus 190 ~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d---------- 259 (630)
.. ..++. ......|..|.||||+|+..|+.+++++|+++|+++ +..+
T Consensus 77 ----------------~~---~~~~~---~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~ 133 (260)
T 3jxi_A 77 ----------------NM---REFIN---SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV-HAQARGRFFQPKDE 133 (260)
T ss_dssp ----------------CH---HHHHT---CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCEECCCSSSCC
T ss_pred ----------------ch---Hhhhc---ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc-CccccccccCcccc
Confidence 00 00000 112223445666666666666666666666666665 3334
Q ss_pred ----cCCCcHHHHHHHcCCHHHHHHHHh---CCCCCCcccCCCCCchhhhhccCCC---------HHHHHHhhcCCCCc-
Q 006802 260 ----NNGKTVLHSAARMGHLEVVKALVS---KDPSTGFRTDKKGQTALHMAVKGQN---------EDIVLELIRPDPSV- 322 (630)
Q Consensus 260 ----~~g~tpLh~Aa~~g~~~iv~~Ll~---~~~~~~~~~d~~g~t~Lh~Aa~~g~---------~~iv~~Ll~~~~~~- 322 (630)
..|.||||+|+..|+.+++++|++ .+.+++.. |..|+||||+|+..++ .+++++|++.++++
T Consensus 134 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~-d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~ 212 (260)
T 3jxi_A 134 GGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQ-DSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLF 212 (260)
T ss_dssp CCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCC-CTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCccc-CCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccc
Confidence 467777777777777777777777 66666654 7777777777776665 57777777766544
Q ss_pred -----ccccCCCCChHHHHHHHhCcHHHHHHHhcccCCC
Q 006802 323 -----LKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGID 356 (630)
Q Consensus 323 -----~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~ 356 (630)
.+.+|.+|+||||+|+..|+.+++++|++ +|.+
T Consensus 213 ~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~-~g~~ 250 (260)
T 3jxi_A 213 PDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIR-REIA 250 (260)
T ss_dssp TTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHH-HHHH
T ss_pred cccchhhcccCCCCCHHHHHHHcCCHHHHHHHHH-hCCC
Confidence 26788999999999999999999999998 5544
No 55
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=6.9e-29 Score=251.38 Aligned_cols=189 Identities=24% Similarity=0.318 Sum_probs=121.4
Q ss_pred CcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHH---
Q 006802 160 ETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAA--- 236 (630)
Q Consensus 160 ~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa--- 236 (630)
.+++|.|+..|+.+.++.+++......++..|.+|.||||+|+..|+.+++++|++.++...+..|..|.||||+|+
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~ 156 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALAT 156 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCC
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHH
Confidence 56788888888888888888764333456677777777777777777777777777776446666777777777777
Q ss_pred --HcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHH
Q 006802 237 --AQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLE 314 (630)
Q Consensus 237 --~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~ 314 (630)
..++.+++++|++.|... ...+..|.||||+|+..|+.+++++|++.+++++.. |..|+||||+|+..|+.+++++
T Consensus 157 ~~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~-d~~G~TpLh~A~~~g~~~iv~~ 234 (276)
T 4hbd_A 157 LKTQDDIETVLQLFRLGNIN-AKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQ-DDDGSTALMCACEHGHKEIAGL 234 (276)
T ss_dssp CCSHHHHHHHHHHHHHSCTT-CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHH
T ss_pred hhhhhhHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC-CCCCCCHHHHHHHCCCHHHHHH
Confidence 456667777777766544 445556666666666666666666666666655443 5555555555555555555555
Q ss_pred hhc-CCCCcccccCCCCChHHHHHHHhCcHHHHHHHhc
Q 006802 315 LIR-PDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLS 351 (630)
Q Consensus 315 Ll~-~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 351 (630)
|++ .+.++ +.+|.+|+||||+|+..|+.+++++|++
T Consensus 235 Ll~~~gad~-~~~d~~g~TpL~~A~~~g~~~iv~~Ll~ 271 (276)
T 4hbd_A 235 LLAVPSCDI-SLTDRDGSTALMVALDAGQSEIASMLYS 271 (276)
T ss_dssp HHTSTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHhcCCCCC-cCcCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 555 33332 5555555555555555555555555554
No 56
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=6.5e-29 Score=251.57 Aligned_cols=191 Identities=25% Similarity=0.329 Sum_probs=175.1
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCC-ccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHH---
Q 006802 195 YDSFHVAAKQGHLEVLKELLGEFPN-LVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAA--- 270 (630)
Q Consensus 195 ~t~Lh~A~~~g~~eiv~~Ll~~~~~-~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa--- 270 (630)
.+++|.|+..|+.+.++.+++...+ .++..|..|.||||+|+..|+.+++++|++.|+...+..+..|.||||+|+
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~ 156 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALAT 156 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCC
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHH
Confidence 3678999999999999999876544 356678999999999999999999999999998445888999999999999
Q ss_pred --HcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHH
Q 006802 271 --RMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRC 348 (630)
Q Consensus 271 --~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~ 348 (630)
..++.++++.|++.+..... .+..|+||||+|+..|+.+++++|++.++++ |.+|.+|+||||+|+..|+.+++++
T Consensus 157 ~~~~~~~~~v~~Ll~~g~~~~~-~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~-n~~d~~G~TpLh~A~~~g~~~iv~~ 234 (276)
T 4hbd_A 157 LKTQDDIETVLQLFRLGNINAK-ASQAGQTALMLAVSHGRVDVVKALLACEADV-NVQDDDGSTALMCACEHGHKEIAGL 234 (276)
T ss_dssp CCSHHHHHHHHHHHHHSCTTCC-CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred hhhhhhHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHH
Confidence 67889999999999977765 4889999999999999999999999999886 9999999999999999999999999
Q ss_pred HhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 006802 349 LLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAG 387 (630)
Q Consensus 349 Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~g 387 (630)
|++..|++++.+|..|.||||+|+..|+.+++++|++++
T Consensus 235 Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 235 LLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 998789999999999999999999999999999999875
No 57
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=4.3e-28 Score=226.96 Aligned_cols=164 Identities=27% Similarity=0.360 Sum_probs=91.3
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCC
Q 006802 229 STALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQN 308 (630)
Q Consensus 229 ~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~ 308 (630)
.||||.|+..|+.++++.|++.+++..+..|..|.||||+|+..|+.+++++|++.++++... |..|.||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHIL-AKERESALSLASTGGY 81 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCC-CTTCCCHHHHHHHTTC
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhh-cccCCCHHHHHHHCCC
Confidence 345555555555555555555554433444555555555555555555555555555544433 4555555555555555
Q ss_pred HHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 006802 309 EDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGA 388 (630)
Q Consensus 309 ~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga 388 (630)
.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++|+
T Consensus 82 ~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (172)
T 3v30_A 82 TDIVGLLLERDVDI-NIYDWNGGTPLLYAVRGNHVKCVEALLA-RGADLTTEADSGYTPMDLAVALGYRKVQQVIENHIL 159 (172)
T ss_dssp HHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHH
Confidence 55555555555443 5556666666666666666666666665 566666666666666666666666666666666666
Q ss_pred CCcccCC
Q 006802 389 AHSKDHG 395 (630)
Q Consensus 389 ~~~~~~~ 395 (630)
+....+.
T Consensus 160 ~~~~~~~ 166 (172)
T 3v30_A 160 KLFQSNL 166 (172)
T ss_dssp HHSCC--
T ss_pred HHhcccC
Confidence 5544433
No 58
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=5.1e-28 Score=226.46 Aligned_cols=170 Identities=28% Similarity=0.336 Sum_probs=154.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcC
Q 006802 194 GYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 273 (630)
Q Consensus 194 g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g 273 (630)
+.+|||.|+..|+.++++.|++.++...+..|..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHCC
Confidence 4689999999999999999999999888889999999999999999999999999999987 778899999999999999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhccc
Q 006802 274 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIE 353 (630)
Q Consensus 274 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 353 (630)
+.+++++|++.++++... |..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .
T Consensus 81 ~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~~~~L~~-~ 157 (172)
T 3v30_A 81 YTDIVGLLLERDVDINIY-DWNGGTPLLYAVRGNHVKCVEALLARGADL-TTEADSGYTPMDLAVALGYRKVQQVIEN-H 157 (172)
T ss_dssp CHHHHHHHHTTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH-H
T ss_pred CHHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHhCcHHHHHHHHH-H
Confidence 999999999999998765 899999999999999999999999998876 8899999999999999999999999999 8
Q ss_pred CCCcccccCCCCCH
Q 006802 354 GIDVNSLNKAGESP 367 (630)
Q Consensus 354 g~~in~~n~~G~Tp 367 (630)
++++...|..|.||
T Consensus 158 ~~~~~~~~~~~~~p 171 (172)
T 3v30_A 158 ILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHSCC-------
T ss_pred HHHHhcccCCCCCC
Confidence 99999999998887
No 59
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=5.9e-28 Score=230.40 Aligned_cols=162 Identities=25% Similarity=0.296 Sum_probs=126.3
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhh
Q 006802 222 MTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALH 301 (630)
Q Consensus 222 ~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh 301 (630)
+..|..|.||||+|+..|+.+++++|++.++++ +..+..|.||||+|+..|+.+++++|++.++++... |..|.||||
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~ 106 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTK-DFSGKTPLM 106 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCC-CTTSCCHHH
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCC-CCCCCcHHH
Confidence 345667777777777777777777777776665 556667777777777777777777777777766554 677777777
Q ss_pred hhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHH
Q 006802 302 MAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFS 381 (630)
Q Consensus 302 ~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~ 381 (630)
+|+..|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.++++
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~v~ 184 (192)
T 2rfm_A 107 WSIIFGYSEMSYFLLEHGANV-NDRNLEGETPLIVASKYGRSEIVKKLLE-LGADISARDLTGLTAEASARIFGRQEVIK 184 (192)
T ss_dssp HHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHhCcHHHHH
Confidence 777777777777777777665 7778888888888888888888888888 78888888888888888888888888888
Q ss_pred HHHHcC
Q 006802 382 LLKEAG 387 (630)
Q Consensus 382 ~L~~~g 387 (630)
+|+++|
T Consensus 185 ~Ll~~~ 190 (192)
T 2rfm_A 185 IFTEVR 190 (192)
T ss_dssp HHHHHH
T ss_pred HHHhcc
Confidence 888765
No 60
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=1.9e-30 Score=273.14 Aligned_cols=246 Identities=22% Similarity=0.221 Sum_probs=144.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCcc-ccccCCCCCC
Q 006802 117 GKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLE-TASIPARNGY 195 (630)
Q Consensus 117 ~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~-~~~~~~~~g~ 195 (630)
+.++.||||.||+.|+.++|++|++.+.+. ......|..|.||||+|+..|+.++|++|++++... ..+..+.+ .
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~---~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~ 164 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSD---EIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-Y 164 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CC---SSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-H
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcH---HHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-C
Confidence 344568888888888888888888776521 111233445677888888888888888888774210 01222222 7
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCccc-cCCCCCChHHHHHH-HcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcC
Q 006802 196 DSFHVAAKQGHLEVLKELLGEFPNLVM-TTDLSCSTALHTAA-AQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 273 (630)
Q Consensus 196 t~Lh~A~~~g~~eiv~~Ll~~~~~~~~-~~d~~g~tpL~~Aa-~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g 273 (630)
||||+|+..|+.+++++|++++++... ..|..|.||||+|+ ..|+.+++++|++.|+ .|.||||.|+..|
T Consensus 165 TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--------~~~taL~~Aa~~g 236 (376)
T 2aja_A 165 HAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV--------MLAYAEIHEFEYG 236 (376)
T ss_dssp HHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--------HHHHHHHCTTTTT
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--------ccchHHHHHHHCC
Confidence 888888888888888888888776432 24566778888888 8888888888887542 2678888888888
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHH---------------------------HHHhhcCCCCc----
Q 006802 274 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDI---------------------------VLELIRPDPSV---- 322 (630)
Q Consensus 274 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~i---------------------------v~~Ll~~~~~~---- 322 (630)
+.+++++|++.+++.... .++++.|+.+|+.++ +++|++.+...
T Consensus 237 ~~evv~lL~~~ga~~~~~-----~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~ 311 (376)
T 2aja_A 237 EKYVNPFIARHVNRLKEM-----HDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAP 311 (376)
T ss_dssp TTTHHHHHHHHHHHHHHH-----HTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSS
T ss_pred CHHHHHHHHhcCcccccc-----cHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhc
Confidence 888888888776654322 236666666665542 22233211100
Q ss_pred ccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHH
Q 006802 323 LKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLL 383 (630)
Q Consensus 323 ~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L 383 (630)
....++.++||||+|+..|+.+++++|++ . ....+..|+|++++|...|..++.+.-
T Consensus 312 ~g~~~n~~~~~L~~A~~~g~~e~v~lLl~-~---~~v~~~~~~~~~~~~~~~~~~~~~~~~ 368 (376)
T 2aja_A 312 TATIPGDANELLRLALRLGNQGACALLLS-I---PSVLALTKANNYYINETGGRLDLRAVA 368 (376)
T ss_dssp CCSSTTCCCHHHHHHHHHTCTTHHHHHTT-S---HHHHHSCC-------------------
T ss_pred cCCCCCCccHHHHHHHHcCcHHHHHHHHc-C---hHHHHHHHHhccccccccccccHHHHH
Confidence 01223456677888888888888888877 2 355677777888777777777766543
No 61
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=1.7e-27 Score=221.80 Aligned_cols=161 Identities=25% Similarity=0.281 Sum_probs=129.8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccC
Q 006802 227 SCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKG 306 (630)
Q Consensus 227 ~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~ 306 (630)
.|.||||.|+..|+.+++++|++.+.++ +..|..|.||||+|+..|+.+++++|++.++++... |..|.||||+|+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLL-GKGRESALSLACSK 79 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTCCCHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCc-CCCCCcHHHHHHHc
Confidence 4567777777777777777777777664 566777777777777777777777777777776654 77778888888888
Q ss_pred CCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHc
Q 006802 307 QNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEA 386 (630)
Q Consensus 307 g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ 386 (630)
|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|+++
T Consensus 80 ~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (167)
T 3v31_A 80 GYTDIVKMLLDCGVDV-NEYDWNGGTPLLYAVHGNHVKCVKMLLE-SGADPTIETDSGYNSMDLAVALGYRSVQQVIESH 157 (167)
T ss_dssp TCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHH
Confidence 8888888888777665 7788889999999999999999999998 7899999999999999999999999999999888
Q ss_pred CCCCc
Q 006802 387 GAAHS 391 (630)
Q Consensus 387 ga~~~ 391 (630)
+++..
T Consensus 158 ~~~~~ 162 (167)
T 3v31_A 158 LLKLL 162 (167)
T ss_dssp HHHHC
T ss_pred HHHHH
Confidence 76543
No 62
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=3.4e-27 Score=220.39 Aligned_cols=159 Identities=31% Similarity=0.433 Sum_probs=132.2
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhc
Q 006802 225 DLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAV 304 (630)
Q Consensus 225 d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa 304 (630)
...+.+||+.|+..|+.+++++|++.|.++ +..|.+|.||||+|+..|+.+++++|++.+++.... |..|.||||+|+
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~ 88 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAV-DHAGMTPLRLAA 88 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc-CCCCCCHHHHHH
Confidence 445567888888888888888888888776 566778888888888888888888888888777654 778888888888
Q ss_pred cCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHH
Q 006802 305 KGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLK 384 (630)
Q Consensus 305 ~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~ 384 (630)
..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+
T Consensus 89 ~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 166 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGADV-NANDMEGHTPLHLAAMFGHLEIVEVLLK-NGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166 (169)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 888888888888887765 7888889999999999999999999998 78999999999999999999999999999998
Q ss_pred HcC
Q 006802 385 EAG 387 (630)
Q Consensus 385 ~~g 387 (630)
++|
T Consensus 167 ~~G 169 (169)
T 2y1l_E 167 KLN 169 (169)
T ss_dssp TC-
T ss_pred HcC
Confidence 876
No 63
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=1.8e-27 Score=220.24 Aligned_cols=157 Identities=28% Similarity=0.473 Sum_probs=118.8
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCC
Q 006802 228 CSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQ 307 (630)
Q Consensus 228 g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g 307 (630)
..||||.|+..|+.+++++|++.|.++ +..+..|.||||+|+. |+.+++++|++.++++... |..|.||||+|+..|
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNV-NAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLK-DRTGFAVIHDAARAG 81 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCT-TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHHT
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCc-cccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHcC
Confidence 457777777777777777777777665 5566777777777777 7777777777777766654 777777777777777
Q ss_pred CHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCC-cccccCCCCCHHHHHHHcCCHHHHHHHHHc
Q 006802 308 NEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGID-VNSLNKAGESPLDVAEKLGNTELFSLLKEA 386 (630)
Q Consensus 308 ~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~-in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ 386 (630)
+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|++ ++..|..|.||||+|+..++.+++++|+++
T Consensus 82 ~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 159 (162)
T 1ihb_A 82 FLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVK-HTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 159 (162)
T ss_dssp CHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-HSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH-ccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHh
Confidence 777777777777655 7778888888888888888888888887 5665 578888888888888888888888888888
Q ss_pred CCC
Q 006802 387 GAA 389 (630)
Q Consensus 387 ga~ 389 (630)
||+
T Consensus 160 GAd 162 (162)
T 1ihb_A 160 GAG 162 (162)
T ss_dssp C--
T ss_pred CCC
Confidence 874
No 64
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=7.1e-27 Score=222.88 Aligned_cols=162 Identities=23% Similarity=0.248 Sum_probs=120.8
Q ss_pred CCCCCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCC
Q 006802 113 KDSPGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPAR 192 (630)
Q Consensus 113 ~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~ 192 (630)
++.+|..|.||||+||..|+.+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|+++ +.+++..+.
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~ 99 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDK------LEDKDIEGSTALIWAVKNNRLGIAEKLLSK--GSNVNTKDF 99 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH--TCCTTCCCT
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccc------cccccccCccHHHHHHHcCCHHHHHHHHHC--CCCCCCCCC
Confidence 456677788888888888888888888876543 456677778888888888888888888876 345666677
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHc
Q 006802 193 NGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARM 272 (630)
Q Consensus 193 ~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~ 272 (630)
.|.||||+|+..|+.+++++|++.+++ ++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..
T Consensus 100 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~ 177 (192)
T 2rfm_A 100 SGKTPLMWSIIFGYSEMSYFLLEHGAN-VNDRNLEGETPLIVASKYGRSEIVKKLLELGADI-SARDLTGLTAEASARIF 177 (192)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHh
Confidence 777777777777777777777777766 4456777777777777777777777777777775 56677777777777777
Q ss_pred CCHHHHHHHHhC
Q 006802 273 GHLEVVKALVSK 284 (630)
Q Consensus 273 g~~~iv~~Ll~~ 284 (630)
|+.+++++|++.
T Consensus 178 ~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 178 GRQEVIKIFTEV 189 (192)
T ss_dssp TCHHHHHHHHHH
T ss_pred CcHHHHHHHHhc
Confidence 777777777764
No 65
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=2e-29 Score=248.06 Aligned_cols=188 Identities=20% Similarity=0.186 Sum_probs=105.1
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHH
Q 006802 154 KKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALH 233 (630)
Q Consensus 154 ~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~ 233 (630)
..+..|.||||+|+..|+.++|++|++. +.+++..+..|.||||+|+..|+.+++++|++.+.+ ++..|..|.||||
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-~n~~d~~g~tpLh 92 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAVKE--MNDPSQPNEEGITALHNAICGANYSIVDFLITAGAN-VNSPDSHGWTPLH 92 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHHHH--SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHH
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHHhc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHH
Confidence 3344455556666666666666666654 234445555566666666666666666666655554 3344555666666
Q ss_pred HHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHH--HHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHH
Q 006802 234 TAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSA--ARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDI 311 (630)
Q Consensus 234 ~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~A--a~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~i 311 (630)
+|+..|+.+++++|++.|+++....+.+|.||||+| +..|+.+++++|++.++++... |..|.||++.++..+..
T Consensus 93 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~-~~~~~~~l~~~~~~~~~-- 169 (229)
T 2vge_A 93 CAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLM-NSGAVYALWDYSAEFGD-- 169 (229)
T ss_dssp HHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTS-GGGEEEESSCBCCSSTT--
T ss_pred HHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccc-cCCchHHHHHHhhcccc--
Confidence 666666666666666666555222234566666666 5666666666666665555543 55566666644444322
Q ss_pred HHHhhcCCCCc-ccccCCCCChHHHHHHHhCcHHHHHH
Q 006802 312 VLELIRPDPSV-LKLEDNKGNTALHIAIKKGRTQIVRC 348 (630)
Q Consensus 312 v~~Ll~~~~~~-~n~~d~~G~TpLh~A~~~g~~~iv~~ 348 (630)
+.|++.+.++ ++.+|.+|+||||+|+..|+.++|+.
T Consensus 170 -~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~ 206 (229)
T 2vge_A 170 -ELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPR 206 (229)
T ss_dssp -BCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred -ccCccccccccccccCCCcccHHHHHHHcCCcceeeh
Confidence 3445554442 35556666666666666666665554
No 66
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=5.9e-27 Score=216.74 Aligned_cols=158 Identities=28% Similarity=0.368 Sum_probs=112.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcC
Q 006802 194 GYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 273 (630)
Q Consensus 194 g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g 273 (630)
..||||.|+..|+.+++++|++.+++ .+..|..|.||||+|+. |+.+++++|++.|+++ +..+..|.||||+|+..|
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVN-VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCC-TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHT
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCC-ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcC
Confidence 34666666666666666666666655 34456667777777766 7777777777776665 556667777777777777
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhccc
Q 006802 274 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIE 353 (630)
Q Consensus 274 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 353 (630)
+.+++++|++.+++++.. |..|.||||+|+..|+.+++++|++.+++.++.+|..|.||||+|+..|+.+++++|++ .
T Consensus 82 ~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~-~ 159 (162)
T 1ihb_A 82 FLDTLQTLLEFQADVNIE-DNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQA-N 159 (162)
T ss_dssp CHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-T
T ss_pred CHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHH-h
Confidence 777777777777666554 67777777777777777777777777776667778888888888888888888888887 6
Q ss_pred CCC
Q 006802 354 GID 356 (630)
Q Consensus 354 g~~ 356 (630)
|+|
T Consensus 160 GAd 162 (162)
T 1ihb_A 160 GAG 162 (162)
T ss_dssp C--
T ss_pred CCC
Confidence 654
No 67
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=2.9e-27 Score=219.77 Aligned_cols=160 Identities=28% Similarity=0.378 Sum_probs=118.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhc
Q 006802 225 DLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAV 304 (630)
Q Consensus 225 d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa 304 (630)
|..|.||||.|+..|+.++++.|++.+.......+..|.||||+|+..|+.+++++|++.++++... |..|.||||+|+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~ 83 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAK-DKGGLVPLHNAC 83 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCcc-CCCCCCHHHHHH
Confidence 4455666777776677777766666544433445566667777777777777777777776666554 667777777777
Q ss_pred cCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHH
Q 006802 305 KGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLK 384 (630)
Q Consensus 305 ~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~ 384 (630)
..|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|.. ++.+++++|+
T Consensus 84 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~ 160 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVV-NVADLWKFTPLHEAAAKGKYEICKLLLQ-HGADPTKKNRDGNTPLDLVKD-GDTDIQDLLR 160 (165)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHH
T ss_pred HcCcHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCChhHhHhc-CChHHHHHHh
Confidence 777777777777776665 7778888899999999999999999988 788899899999999998776 8889999998
Q ss_pred HcCC
Q 006802 385 EAGA 388 (630)
Q Consensus 385 ~~ga 388 (630)
++||
T Consensus 161 ~~gA 164 (165)
T 3twr_A 161 GDAA 164 (165)
T ss_dssp TC--
T ss_pred hccc
Confidence 8876
No 68
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=2.2e-26 Score=211.03 Aligned_cols=150 Identities=29% Similarity=0.389 Sum_probs=121.6
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCC
Q 006802 229 STALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQN 308 (630)
Q Consensus 229 ~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~ 308 (630)
.|||+.|+..|+.+++++|++.|++.. .+..|.||||+|+..|+.+++++|++.++++... |..|.||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR-TKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCC-CTTCCCHHHHHHHHTC
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHcCh
Confidence 467788888888888888887777652 4667788888888888888888888777776654 7778888888888888
Q ss_pred HHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHH
Q 006802 309 EDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLL 383 (630)
Q Consensus 309 ~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L 383 (630)
.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|
T Consensus 80 ~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 80 ANIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLIK-YGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 88888888877665 7788888899999988888899998888 7888888888888999999888888888876
No 69
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=8.4e-27 Score=219.83 Aligned_cols=165 Identities=25% Similarity=0.318 Sum_probs=118.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccC
Q 006802 227 SCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKG 306 (630)
Q Consensus 227 ~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~ 306 (630)
.+.+|||.|+..|+.+++++|++.+....+..+..|.||||+|+..|+.+++++|++.++++... |..|.||||+|+..
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVM-NRGDDTPLHLAASH 82 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHc
Confidence 34566666666666666666666644444556666666666666666666666666666666544 66677777777777
Q ss_pred CCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHc
Q 006802 307 QNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEA 386 (630)
Q Consensus 307 g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ 386 (630)
|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+..++.+++++|+++
T Consensus 83 ~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~ 160 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADI-NAVNEHGNVPLHYACFWGQDQVAEDLVA-NGALVSICNKYGEMPVDKAKAPLRELLRERAEKM 160 (179)
T ss_dssp TCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 7777777777776655 7778888888888888888888888888 7888888888888888888888888888888888
Q ss_pred CCCCcccC
Q 006802 387 GAAHSKDH 394 (630)
Q Consensus 387 ga~~~~~~ 394 (630)
|++.....
T Consensus 161 g~~~~~~~ 168 (179)
T 3f6q_A 161 GQNLNRIP 168 (179)
T ss_dssp TCCCSCBC
T ss_pred hcCcccCC
Confidence 88876543
No 70
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=4.9e-26 Score=211.82 Aligned_cols=159 Identities=23% Similarity=0.305 Sum_probs=126.7
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHH
Q 006802 119 RGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSF 198 (630)
Q Consensus 119 ~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~L 198 (630)
.|.||||.||..|+.+++++|++.+.. ++.+|..|.||||+|+..|+.+++++|+++ +.+++..+..|.|||
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L 73 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV------INHTDEEGFTPLMWAAAHGQIAVVEFLLQN--GADPQLLGKGRESAL 73 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC------cCCCCCCCCCHHHHHHHCCCHHHHHHHHHc--CCCCCCcCCCCCcHH
Confidence 477888888888888888888887543 677788888888888888888888888887 455666777888888
Q ss_pred HHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHH
Q 006802 199 HVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVV 278 (630)
Q Consensus 199 h~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv 278 (630)
|+|+..|+.+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~ 151 (167)
T 3v31_A 74 SLACSKGYTDIVKMLLDCGVD-VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADP-TIETDSGYNSMDLAVALGYRSVQ 151 (167)
T ss_dssp HHHHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHH
Confidence 888888888888888888777 4456777888888888888888888888888776 66777888888888888888888
Q ss_pred HHHHhCCCC
Q 006802 279 KALVSKDPS 287 (630)
Q Consensus 279 ~~Ll~~~~~ 287 (630)
++|++++++
T Consensus 152 ~~L~~~~~~ 160 (167)
T 3v31_A 152 QVIESHLLK 160 (167)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888876544
No 71
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=6.9e-26 Score=211.49 Aligned_cols=160 Identities=29% Similarity=0.381 Sum_probs=120.1
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCC
Q 006802 116 PGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGY 195 (630)
Q Consensus 116 ~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~ 195 (630)
.+..+.|+||.||+.|+.++|++|++.+.+ ++.+|..|.||||+|+..|+.+++++|+++ +.+.+..+..|.
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~ 81 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGAD------VNAEDASGWTPLHLAAFNGHLEIVEVLLKN--GADVNAVDHAGM 81 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSC
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCC
Confidence 445667788888888888888888877653 566777888888888888888888888876 455666777788
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCH
Q 006802 196 DSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHL 275 (630)
Q Consensus 196 t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~ 275 (630)
||||+|+..|+.+++++|++.+.+ .+..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.
T Consensus 82 t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~ 159 (169)
T 2y1l_E 82 TPLRLAALFGHLEIVEVLLKNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADV-NAQDKFGKTAFDISIDNGNE 159 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhCCH
Confidence 888888888888888888877776 3456777778888888888888888888877775 56677778888888888888
Q ss_pred HHHHHHHhCC
Q 006802 276 EVVKALVSKD 285 (630)
Q Consensus 276 ~iv~~Ll~~~ 285 (630)
+++++|++.|
T Consensus 160 ~~~~~L~~~G 169 (169)
T 2y1l_E 160 DLAEILQKLN 169 (169)
T ss_dssp HHHHHHHTC-
T ss_pred HHHHHHHHcC
Confidence 8887777653
No 72
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=1.6e-26 Score=217.88 Aligned_cols=166 Identities=19% Similarity=0.243 Sum_probs=95.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcC
Q 006802 194 GYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMG 273 (630)
Q Consensus 194 g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g 273 (630)
+.++||.|+..|+.+++++|++.++...+..|..|.||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+..|
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAASHG 83 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcC
Confidence 4455555555555555555555544444455555555555555555555555555555554 445555566666666666
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhccc
Q 006802 274 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIE 353 (630)
Q Consensus 274 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 353 (630)
+.+++++|++.+++++.. |..|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..++.+++++|++ .
T Consensus 84 ~~~~v~~Ll~~g~~~~~~-d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~~~~~L~~-~ 160 (179)
T 3f6q_A 84 HRDIVQKLLQYKADINAV-NEHGNVPLHYACFWGQDQVAEDLVANGALV-SICNKYGEMPVDKAKAPLRELLRERAEK-M 160 (179)
T ss_dssp CHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-SBCCTTSCCGGGGSCHHHHHHHHHHHHH-T
T ss_pred CHHHHHHHHHcCCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-chhccCCCCcHHHHHHHHHHHHHHHHHH-h
Confidence 666666666665555443 555666666666666666666666655544 5556666666666666666666666666 5
Q ss_pred CCCcccccCC
Q 006802 354 GIDVNSLNKA 363 (630)
Q Consensus 354 g~~in~~n~~ 363 (630)
|++++..+..
T Consensus 161 g~~~~~~~~~ 170 (179)
T 3f6q_A 161 GQNLNRIPYK 170 (179)
T ss_dssp TCCCSCBCCC
T ss_pred hcCcccCCcc
Confidence 6666555443
No 73
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=1.9e-28 Score=257.99 Aligned_cols=242 Identities=22% Similarity=0.224 Sum_probs=182.4
Q ss_pred CChHHHHHHH-cCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCcc-ccccCCCCCCcH
Q 006802 120 GDLQLHLAAR-AGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLE-TASIPARNGYDS 197 (630)
Q Consensus 120 g~T~Lh~Aa~-~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~-~~~~~~~~g~t~ 197 (630)
+.+.++.|+. .++.+.++++++.+. ++.||||+|+..|+.++|++|++++... .....+..|.||
T Consensus 65 ~ll~~~~a~~~~~~~~~~~~l~~~g~-------------~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tp 131 (376)
T 2aja_A 65 QLLCLYYAHYNRNAKQLWSDAHKKGI-------------KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQA 131 (376)
T ss_dssp HHHHHHHHHTTTTCTTHHHHHHHHTC-------------CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHcCC-------------CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCH
Confidence 3467777776 477888888887644 3459999999999999999999985322 112344568899
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCcc--ccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhh-hhccCCCcHHHHHH-HcC
Q 006802 198 FHVAAKQGHLEVLKELLGEFPNLV--MTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAK-IARNNGKTVLHSAA-RMG 273 (630)
Q Consensus 198 Lh~A~~~g~~eiv~~Ll~~~~~~~--~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~-~~d~~g~tpLh~Aa-~~g 273 (630)
||+|+..|+.+++++|++++++.. +..+.+ .||||+|+..|+.+++++|+++|+++.. ..|.+|.||||+|+ ..|
T Consensus 132 L~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G 210 (376)
T 2aja_A 132 FRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRG 210 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCC
Confidence 999999999999999999997521 112222 8999999999999999999999998733 27888999999999 999
Q ss_pred CHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHh-------------
Q 006802 274 HLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKK------------- 340 (630)
Q Consensus 274 ~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~------------- 340 (630)
+.++|++|++.++ .|.||||.|+.+|+.+++++|++.++++ +..|. +++.|+..
T Consensus 211 ~~eiv~~Ll~~ga--------~~~taL~~Aa~~g~~evv~lL~~~ga~~-~~~~~----~l~~A~~~g~~~vv~~~~~~~ 277 (376)
T 2aja_A 211 HHNVINFLLDCPV--------MLAYAEIHEFEYGEKYVNPFIARHVNRL-KEMHD----AFKLSNPDGVFDLVTKSECLQ 277 (376)
T ss_dssp CHHHHHHHTTSHH--------HHHHHHHCTTTTTTTTHHHHHHHHHHHH-HHHHT----TTTTTSSSSCCCCSSHHHHHH
T ss_pred CHHHHHHHHhCCC--------ccchHHHHHHHCCCHHHHHHHHhcCccc-ccccH----HHHHHHHCCChhhhcHHhhhh
Confidence 9999999998652 3889999999999999999999876543 22221 22222222
Q ss_pred --------------CcHHHHHHHhcccCCC----cccccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 006802 341 --------------GRTQIVRCLLSIEGID----VNSLNKAGESPLDVAEKLGNTELFSLLKEAGA 388 (630)
Q Consensus 341 --------------g~~~iv~~Ll~~~g~~----in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga 388 (630)
+..+.+++|++..++. .....+.+.|||++|+..|+.+++++|++.|.
T Consensus 278 ~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~~ 343 (376)
T 2aja_A 278 GFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPS 343 (376)
T ss_dssp HHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSHH
T ss_pred hHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcChH
Confidence 2355667776632211 11223457789999999999999999998764
No 74
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=3.5e-28 Score=239.14 Aligned_cols=201 Identities=18% Similarity=0.161 Sum_probs=171.4
Q ss_pred cccCCCCCCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccc
Q 006802 109 RKKNKDSPGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETAS 188 (630)
Q Consensus 109 ~~~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~ 188 (630)
.....+..+..|.||||.||..|+.++|++|++.+.+ ++.+|..|.||||+|+..|+.++|++|++. +.+++
T Consensus 10 ~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~------~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~--ga~~n 81 (229)
T 2vge_A 10 SPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMND------PSQPNEEGITALHNAICGANYSIVDFLITA--GANVN 81 (229)
T ss_dssp CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTT
T ss_pred CCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCC
Confidence 3344556677889999999999999999999998764 677899999999999999999999999998 56778
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHH--HHcCCHHHHHHHHhcCCchhhhhccCCCcHH
Q 006802 189 IPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTA--AAQGHIDVVNFLLEIDSNLAKIARNNGKTVL 266 (630)
Q Consensus 189 ~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~A--a~~g~~e~v~~LL~~~~~~~~~~d~~g~tpL 266 (630)
..|..|.||||+|+..|+.+++++|++.++++....+..|.||||+| +..|+.+++++|++.|+++ +..|..|.||+
T Consensus 82 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~-~~~~~~~~~~l 160 (229)
T 2vge_A 82 SPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSM-GLMNSGAVYAL 160 (229)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHT-TTSGGGEEEES
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCc-ccccCCchHHH
Confidence 88999999999999999999999999999996655567999999999 9999999999999999987 67788999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCC-cccCCCCCchhhhhccCCCHHHHHHh-hcCCCC
Q 006802 267 HSAARMGHLEVVKALVSKDPSTG-FRTDKKGQTALHMAVKGQNEDIVLEL-IRPDPS 321 (630)
Q Consensus 267 h~Aa~~g~~~iv~~Ll~~~~~~~-~~~d~~g~t~Lh~Aa~~g~~~iv~~L-l~~~~~ 321 (630)
+.++..+.. +.|++.+++.. ..+|..|+||||+|+..|+.++|+.. ++..+.
T Consensus 161 ~~~~~~~~~---~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~l~~~p~ 214 (229)
T 2vge_A 161 WDYSAEFGD---ELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYFGLFPR 214 (229)
T ss_dssp SCBCCSSTT---BCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGGEESSCC
T ss_pred HHHhhcccc---ccCccccccccccccCCCcccHHHHHHHcCCcceeehhhhhhCCC
Confidence 976655433 57788887732 33588999999999999999999764 444443
No 75
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=9.5e-26 Score=206.84 Aligned_cols=150 Identities=26% Similarity=0.346 Sum_probs=105.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCC
Q 006802 195 YDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGH 274 (630)
Q Consensus 195 ~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~ 274 (630)
.++||.|+..|+.+++++|++.+++.. .+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTC
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCh
Confidence 356666666666666666666666532 4566677777777777777777777776665 5566667777777777777
Q ss_pred HHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHH
Q 006802 275 LEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCL 349 (630)
Q Consensus 275 ~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~L 349 (630)
.+++++|++.++++... |..|.||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|
T Consensus 80 ~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 80 ANIVEVLLKHGADVNAK-DMLKMTALHWATEHNHQEVVELLIKYGADV-HTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHHTTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 77777777777766554 677777777777777777777777776665 67777778888888888887777765
No 76
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=7.8e-26 Score=207.88 Aligned_cols=152 Identities=26% Similarity=0.402 Sum_probs=97.3
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCC
Q 006802 229 STALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQN 308 (630)
Q Consensus 229 ~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~ 308 (630)
.||||.|+..|+.+++++|++......+..+..|.||||+ +..|+.+++++|++.++++... |..|.||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQ-DTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTC
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCc-CCCCCCHHHHHHHcCc
Confidence 3566666666666666666655222224455566666666 6666666666666666655443 5666666666666666
Q ss_pred HHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHH
Q 006802 309 EDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKE 385 (630)
Q Consensus 309 ~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~ 385 (630)
.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ . ++++.+|..|.||||+|+..++.+++++|++
T Consensus 81 ~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 81 LDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFLAA-E-SDLHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp HHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHT-T-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred HHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHhChHHHHHHHHh-c-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 66666666666544 6666677777777777777777777776 3 6677777777777777777777777777665
No 77
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=1.5e-25 Score=208.00 Aligned_cols=160 Identities=24% Similarity=0.275 Sum_probs=115.7
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHH
Q 006802 156 NQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTA 235 (630)
Q Consensus 156 n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~A 235 (630)
|..|.||||.|+..|+.+++++|++.. .......+..|.||||+|+..|+.+++++|++.+.+ ++..|..|.||||+|
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A 82 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQ-SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD-VHAKDKGGLVPLHNA 82 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTT-TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcC-CCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC-CCccCCCCCCHHHHH
Confidence 455677777777777777777777652 334455566677777777777777777777777766 445667777888888
Q ss_pred HHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHh
Q 006802 236 AAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLEL 315 (630)
Q Consensus 236 a~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~L 315 (630)
+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|++.++++... |..|.||||+|+. ++.+++++|
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~-~~~g~t~l~~a~~-~~~~i~~~L 159 (165)
T 3twr_A 83 CSYGHYEVAELLVKHGAVV-NVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKK-NRDGNTPLDLVKD-GDTDIQDLL 159 (165)
T ss_dssp HHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCTGGGSCT-TCHHHHHHH
T ss_pred HHcCcHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc-CCCCCChhHhHhc-CChHHHHHH
Confidence 8888888888888877776 566777888888888888888888888877776654 7778888888666 777888777
Q ss_pred hcCCC
Q 006802 316 IRPDP 320 (630)
Q Consensus 316 l~~~~ 320 (630)
++.++
T Consensus 160 ~~~gA 164 (165)
T 3twr_A 160 RGDAA 164 (165)
T ss_dssp HTC--
T ss_pred hhccc
Confidence 77653
No 78
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=2e-25 Score=205.13 Aligned_cols=152 Identities=25% Similarity=0.337 Sum_probs=98.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCC
Q 006802 195 YDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGH 274 (630)
Q Consensus 195 ~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~ 274 (630)
.||||.|+..|+.+++++|++..+...+..|..|.||||+ +..|+.+++++|+++|+++ +..|..|.||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCc
Confidence 3556666666666666666655322344455566666666 6666666666666666654 4556666666666666666
Q ss_pred HHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhc
Q 006802 275 LEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLS 351 (630)
Q Consensus 275 ~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 351 (630)
.+++++|++.++++... |..|+||||+|+..|+.+++++|++. .+ ++.+|.+|.||||+|+..|+.+++++|++
T Consensus 81 ~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~-~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVP-DGTGALPIHLAVQEGHTAVVSFLAAE-SD-LHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp HHHHHHHHHTTCCSCCC-CTTSCCHHHHHHHHTCHHHHHHHHTT-SC-TTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCc-CCCCCcHHHHHHHhChHHHHHHHHhc-cC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 66666666666665543 66677777777777777777777766 33 36677777777777777777777777775
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=2.8e-25 Score=219.76 Aligned_cols=181 Identities=20% Similarity=0.193 Sum_probs=113.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCc
Q 006802 117 GKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYD 196 (630)
Q Consensus 117 ~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t 196 (630)
+..|.||||.|++.|+.+.++.|++.+.+. + .+..|.||||.|+..|+.++|++|++. +.+++..|..|.|
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~------~-~~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~d~~g~t 72 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRV------K-FNPLPLALLLDSSLEGEFDLVQRIIYE--VDDPSLPNDEGIT 72 (239)
T ss_dssp ------------------------------------------CHHHHHHHHHHTCHHHHHHHTST--TSSCCCCCTTSCC
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCc------c-cCchhhHHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCC
Confidence 356888888888888888888888877642 2 246678888888888888888888877 3466777888888
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCC-cHHHHH--HHcC
Q 006802 197 SFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGK-TVLHSA--ARMG 273 (630)
Q Consensus 197 ~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~-tpLh~A--a~~g 273 (630)
|||+|+..|+.+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|+++|+++ +..+..|. ||||+| +..|
T Consensus 73 ~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~~~t~l~~a~~~~~g 150 (239)
T 1ycs_B 73 ALHNAVCAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV-FAMTYSDMQTAADKCEEMEEG 150 (239)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHCCSSSTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-ceecCCCCcchHHHHHHhhhc
Confidence 88888888888888888888777 4567778888888888888888888888888887 44555554 888888 6778
Q ss_pred CHHHHHHHHhCCCCCCcc--------cCCCCCchhhhhccCCC
Q 006802 274 HLEVVKALVSKDPSTGFR--------TDKKGQTALHMAVKGQN 308 (630)
Q Consensus 274 ~~~iv~~Ll~~~~~~~~~--------~d~~g~t~Lh~Aa~~g~ 308 (630)
+.+++++|++.+++.... .+..+.++++++.+.|.
T Consensus 151 ~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 151 YTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp CCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred cHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 888888888876665432 25567777777777765
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.91 E-value=1.2e-25 Score=222.52 Aligned_cols=206 Identities=19% Similarity=0.215 Sum_probs=133.7
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHH
Q 006802 156 NQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTA 235 (630)
Q Consensus 156 n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~A 235 (630)
+..|.||||.|+..|+.++++.|++++ .+++. +..|.||||.|+..|+.+++++|++.+++ ++..|..|.||||+|
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g--~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A 77 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHG--MRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDD-PSLPNDEGITALHNA 77 (239)
T ss_dssp --------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-CCCCCTTSCCHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccC--CCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHH
Confidence 356899999999999999999999884 33343 36788999999999999999999998886 567788999999999
Q ss_pred HHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCC-chhhhh--ccCCCHHHH
Q 006802 236 AAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQ-TALHMA--VKGQNEDIV 312 (630)
Q Consensus 236 a~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~-t~Lh~A--a~~g~~~iv 312 (630)
+..|+.+++++|+++|+++ +..|.+|.||||+|+..|+.+++++|++.++++... +..|. ||||+| +..|+.+++
T Consensus 78 ~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~-~~~~~~t~l~~a~~~~~g~~~~~ 155 (239)
T 1ycs_B 78 VCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAM-TYSDMQTAADKCEEMEEGYTQCS 155 (239)
T ss_dssp HHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CSSSCCCHHHHCCSSSTTCCCHH
T ss_pred HHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccee-cCCCCcchHHHHHHhhhccHHHH
Confidence 9999999999999999887 778889999999999999999999999999988776 54444 999998 788889999
Q ss_pred HHhhcCCCCcccc---------cCCCCChHHHHHHHhCcHHHHHHHhcccCCC------cccccCCCCCHHHHH
Q 006802 313 LELIRPDPSVLKL---------EDNKGNTALHIAIKKGRTQIVRCLLSIEGID------VNSLNKAGESPLDVA 371 (630)
Q Consensus 313 ~~Ll~~~~~~~n~---------~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~------in~~n~~G~TpL~~A 371 (630)
++|++.+++. +. .|..+.+++++|...|. +++.|.+ .+.+ ....+..|.+|.++.
T Consensus 156 ~~Ll~~~a~~-~~~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~~-~~~~~~~Ww~~~~~~~~G~~P~~yv 225 (239)
T 1ycs_B 156 QFLYGVQEKM-GIMNKGVIYALWDYEPQNDDELPMKEGD--CMTIIHR-EDEDEIEWWWARLNDKEGYVPRNLL 225 (239)
T ss_dssp HHHHHHHHHT-TTTGGGEEEESSCBCCSSTTBCCBCSSC--EEEECCC-CTTSCSSEEEEEETTEEEEEEGGGE
T ss_pred HHHHHhhhcc-cccccceEEEEeccCCCCCCcccccCCC--EEEEEEe-cCCCCCCEEEEEECCcEEEeehHHe
Confidence 9999876543 22 36677888888877775 3443433 2322 123345555665543
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=6.5e-24 Score=190.58 Aligned_cols=130 Identities=18% Similarity=0.272 Sum_probs=121.5
Q ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCC-CChHH
Q 006802 256 KIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNK-GNTAL 334 (630)
Q Consensus 256 ~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~-G~TpL 334 (630)
+..+..|.||||+|+..|+.+++++|++.++++... |..|+||||+|+. ++.+++++|++.+.++ +.+|.. |+|||
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g~t~L 82 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEAGADPNAL-NRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPATLTRPV 82 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTTBCHH
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCc-CCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCCCCHH
Confidence 567888999999999999999999999999888765 8999999999999 9999999999998876 888999 99999
Q ss_pred HHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 006802 335 HIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAA 389 (630)
Q Consensus 335 h~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~ 389 (630)
|+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++||+
T Consensus 83 ~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHR-AGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHTCHHHHHHHHH-TCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999 8999999999999999999999999999999999985
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=2.8e-24 Score=203.93 Aligned_cols=155 Identities=12% Similarity=0.124 Sum_probs=92.6
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCH----HHHHHHHhCCCCCCcccCCCCCchhhhhc
Q 006802 229 STALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHL----EVVKALVSKDPSTGFRTDKKGQTALHMAV 304 (630)
Q Consensus 229 ~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~----~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa 304 (630)
.++|+.|+..|+.+.++.+++.+.+. ..+..|+||||+|+..|+. +++++|++.|++++.. |..|+||||+|+
T Consensus 7 ~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~-d~~g~TpLh~a~ 83 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSR-TKEGTTLFFPLF 83 (186)
T ss_dssp CSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCC-CTTCCCTHHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCC-CCCCCcHHHHHH
Confidence 34555666666666555555554332 1124456666666665543 3566666666655543 556666666666
Q ss_pred cCCC------HHHHHHhhcCCCCcccccCCCCC-hHHHHHHHh-----CcHHHHHHHhcccCCCcccccCCCCCHHHHHH
Q 006802 305 KGQN------EDIVLELIRPDPSVLKLEDNKGN-TALHIAIKK-----GRTQIVRCLLSIEGIDVNSLNKAGESPLDVAE 372 (630)
Q Consensus 305 ~~g~------~~iv~~Ll~~~~~~~n~~d~~G~-TpLh~A~~~-----g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~ 372 (630)
..++ .+++++|+++|+++ |.+|..|+ ||||+|+.. ++.+++++|++..|++++.+|..|.||||+|+
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~ 162 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADI-TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVK 162 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCS-SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHH
T ss_pred HcCCcchhhHHHHHHHHHHCCCCC-CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHH
Confidence 5554 35566666666554 66666666 666666662 33456777776457777777777777777777
Q ss_pred HcCCHHHHHHHHHcC
Q 006802 373 KLGNTELFSLLKEAG 387 (630)
Q Consensus 373 ~~~~~~iv~~L~~~g 387 (630)
..++.+++++|.++.
T Consensus 163 ~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 163 RCQKPIALKMMEDYI 177 (186)
T ss_dssp TTTCHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHH
Confidence 777777777776654
No 83
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=6.1e-24 Score=195.53 Aligned_cols=138 Identities=20% Similarity=0.259 Sum_probs=78.9
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCCh-HHHHH
Q 006802 259 RNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNT-ALHIA 337 (630)
Q Consensus 259 d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~T-pLh~A 337 (630)
+..|.||||+|+..|+.+++++|++.+++++.. |..|+||||+|+ .|+.+++++|++.+.++ +.+|..|+| |||+|
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAP-NSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHDA 85 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCC-CSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCC-CCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHH
Confidence 445666666666666666666666666555543 556666666664 56666666666665544 566666666 66666
Q ss_pred HHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCch
Q 006802 338 IKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDHGKPPSA 400 (630)
Q Consensus 338 ~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~~~~~~~~~~~~ 400 (630)
+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++|++....+..+.++
T Consensus 86 ~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 147 (156)
T 1bi7_B 86 AREGFLDTLVVLHR-AGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDA 147 (156)
T ss_dssp HHHTCHHHHHHHHH-HTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-------------
T ss_pred HHCCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcc
Confidence 66666666666666 566666666666666666666666666666666666665555444443
No 84
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=5.5e-23 Score=189.10 Aligned_cols=145 Identities=21% Similarity=0.250 Sum_probs=117.6
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCc-hh
Q 006802 222 MTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQT-AL 300 (630)
Q Consensus 222 ~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t-~L 300 (630)
...+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+ .|+.+++++|++.+++++.. |..|.| ||
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~-d~~g~ttpL 82 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCA-DPATLTRPV 82 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCC-CTTTCCCHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCc-CCCCCcHHH
Confidence 346788999999999999999999999999987 778899999999985 99999999999999998765 899999 99
Q ss_pred hhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHH
Q 006802 301 HMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVA 371 (630)
Q Consensus 301 h~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A 371 (630)
|+|+..|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||.+-+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 83 HDAAREGFLDTLVVLHRAGARL-DVRDAWGRLPVDLAEELGHRDVARYLRA-AAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHSS-CC-----------------
T ss_pred HHHHHCCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHhCHHHHHHHHHH-cCCCCCccCcCcCcccccC
Confidence 9999999999999999998876 8999999999999999999999999999 8999999999999998744
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.89 E-value=8.5e-24 Score=200.64 Aligned_cols=162 Identities=15% Similarity=0.106 Sum_probs=129.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCH----HHHHHHHhcCCchhhhhccCCCcHHHHH
Q 006802 194 GYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHI----DVVNFLLEIDSNLAKIARNNGKTVLHSA 269 (630)
Q Consensus 194 g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~----e~v~~LL~~~~~~~~~~d~~g~tpLh~A 269 (630)
++++|+.|+..|+.+.++.+++.+.+.. .+..|.||||+|+..|+. +++++|+++|+++ +..|.+|+||||+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~~--~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~a 82 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYEDK--ESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFPL 82 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSCH--HHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcccc--cccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHHH
Confidence 3467777777777777777777665422 235678888888888864 4888888888887 67788888888888
Q ss_pred HHcCC------HHHHHHHHhCCCCCCcccCCCCC-chhhhhccCC-----CHHHHHHhhc-CCCCcccccCCCCChHHHH
Q 006802 270 ARMGH------LEVVKALVSKDPSTGFRTDKKGQ-TALHMAVKGQ-----NEDIVLELIR-PDPSVLKLEDNKGNTALHI 336 (630)
Q Consensus 270 a~~g~------~~iv~~Ll~~~~~~~~~~d~~g~-t~Lh~Aa~~g-----~~~iv~~Ll~-~~~~~~n~~d~~G~TpLh~ 336 (630)
+..|+ .+++++|++.|++++.. |..|. ||||+|+..+ +.+++++|++ .++++ +.+|..|+||||+
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gadin~~-d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~-~~~d~~G~TpL~~ 160 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGADITAL-YKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL-LIKDKWGLTALEF 160 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCSSSC-BGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCT-TCCCTTSCCHHHH
T ss_pred HHcCCcchhhHHHHHHHHHHCCCCCCcc-CCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCC-cccCCCCCCHHHH
Confidence 88886 68899999999999876 89999 9999999854 3568999999 77776 9999999999999
Q ss_pred HHHhCcHHHHHHHhcccCCCccccc
Q 006802 337 AIKKGRTQIVRCLLSIEGIDVNSLN 361 (630)
Q Consensus 337 A~~~g~~~iv~~Ll~~~g~~in~~n 361 (630)
|++.|+.++|++|.+ ...+.+.++
T Consensus 161 A~~~~~~~~v~~L~~-~~~~~~~~~ 184 (186)
T 3t8k_A 161 VKRCQKPIALKMMED-YIKKYNLKE 184 (186)
T ss_dssp HHTTTCHHHHHHHHH-HHHHHTCCC
T ss_pred HHHcCCHHHHHHHHH-HHHHHhccc
Confidence 999999999999987 444444443
No 86
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.89 E-value=8.8e-23 Score=183.16 Aligned_cols=133 Identities=23% Similarity=0.258 Sum_probs=105.5
Q ss_pred cCCCCCCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccC
Q 006802 111 KNKDSPGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIP 190 (630)
Q Consensus 111 ~~~~~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~ 190 (630)
.+++..+..|.||||.|++.|+.+++++|++.+.+ ++.+|..|.||||+|+. |+.+++++|+++ +.+++..
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~--g~~~~~~ 73 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD------PNALNRFGRRPIQVMMM-GSAQVAELLLLH--GAEPNCA 73 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTCCTTTTTSTT-SCHHHHHHHHHH--TCCSSCC
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC------cCCcCCCCCCHHHHHHc-CCHHHHHHHHHC--CCCCCCc
Confidence 46777888888888888888888888888887653 56777888888888888 888888888887 4556667
Q ss_pred CCC-CCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCc
Q 006802 191 ARN-GYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSN 253 (630)
Q Consensus 191 ~~~-g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~ 253 (630)
+.. |.||||+|+..|+.+++++|++.+++ ++..|..|.||||+|+..|+.+++++|+++|++
T Consensus 74 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 74 DPATLTRPVHDAAREGFLDTLVVLHRAGAR-LDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp BTTTTBCHHHHHHHHTCHHHHHHHHHTCCC-CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 777 78888888888888888888887776 455677788888888888888888888877753
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.88 E-value=1.8e-22 Score=177.65 Aligned_cols=126 Identities=42% Similarity=0.667 Sum_probs=102.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHh
Q 006802 261 NGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKK 340 (630)
Q Consensus 261 ~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~ 340 (630)
+|.||||.|+..|+.+++++|++.++++... |..|.||||+|+..++.+++++|++.+.++ +.+|..|+||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAK-DKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARN 78 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCc-CCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHHc
Confidence 4677777777777777777777777666544 677777777777777777777777776665 77788889999999999
Q ss_pred CcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 006802 341 GRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAA 389 (630)
Q Consensus 341 g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~ 389 (630)
|+.+++++|++ .|++++.+|..|.|||++|+..++.+++++|+++||+
T Consensus 79 ~~~~~~~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 79 GHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred ChHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999988 7888888888999999999999999999999988875
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.88 E-value=1.6e-22 Score=181.36 Aligned_cols=126 Identities=29% Similarity=0.401 Sum_probs=101.2
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHH
Q 006802 259 RNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAI 338 (630)
Q Consensus 259 d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~ 338 (630)
...|.||||+|+..|+.+++++|++.+++++.. |..|.||||+|+..++.+++++|++.+.++ +.+|.+|+||||+|+
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAK-DEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHLAA 88 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHH
Confidence 345677777777777777777777777776654 777788888888888888888888777665 777888888999998
Q ss_pred HhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 006802 339 KKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAG 387 (630)
Q Consensus 339 ~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~g 387 (630)
..|+.+++++|++ .|++++..|..|.||||+|+..++.+++++|+++|
T Consensus 89 ~~~~~~~v~~Ll~-~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLK-HGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHH-cCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 8888889998888 78888888888899999998888888888888876
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.86 E-value=1.2e-21 Score=172.30 Aligned_cols=126 Identities=39% Similarity=0.627 Sum_probs=101.8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccC
Q 006802 227 SCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKG 306 (630)
Q Consensus 227 ~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~ 306 (630)
+|.||||.|+..|+.+++++|++.|.++ +..+..|.||||.|+..|+.+++++|++.++++... |..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAK-DKNGRTPLHLAARN 78 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCccc-CCCCCcHHHHHHHc
Confidence 4678888888888888888888877775 556777888888888888888888888887777654 77888888888888
Q ss_pred CCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCC
Q 006802 307 QNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGID 356 (630)
Q Consensus 307 g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~ 356 (630)
++.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|++ .|+|
T Consensus 79 ~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~-~Gad 126 (126)
T 1n0r_A 79 GHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLE-AGAY 126 (126)
T ss_dssp TCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-HTCC
T ss_pred ChHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCcHHHHHHHHH-cCCC
Confidence 8888888888887765 7788888999999999999999998888 6764
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.86 E-value=9.9e-22 Score=176.25 Aligned_cols=124 Identities=27% Similarity=0.347 Sum_probs=99.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhc
Q 006802 225 DLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAV 304 (630)
Q Consensus 225 d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa 304 (630)
...+.||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+..|+.+++++|++.+++++.. |..|.||||+|+
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-d~~g~t~L~~A~ 88 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAV-DAIGFTPLHLAA 88 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC-CTTCCCHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcC-CCCCCCHHHHHH
Confidence 445678888888888888888888887776 566777888888888888888888888887777654 778888888888
Q ss_pred cCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhc
Q 006802 305 KGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLS 351 (630)
Q Consensus 305 ~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 351 (630)
..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++
T Consensus 89 ~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGADV-NAQDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp HHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCC-cCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 888888888888887765 7788888888888888888888888887
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.85 E-value=2.4e-22 Score=180.43 Aligned_cols=129 Identities=27% Similarity=0.387 Sum_probs=96.9
Q ss_pred hhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHH
Q 006802 257 IARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHI 336 (630)
Q Consensus 257 ~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~ 336 (630)
..|.+|.||||+|+..|+.+++++|++.++++... |..|.||||+|+..|+.+++++|++.+.++ +.+|..|+||||+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~ 82 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVK-DHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPLHD 82 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHHHH
Confidence 35667777777777777777777777777766554 677777777777777777777777776665 7778888888888
Q ss_pred HHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 006802 337 AIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGA 388 (630)
Q Consensus 337 A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga 388 (630)
|+..|+.+++++|++ .|++++.+|..|.||||+|...+..+++++|.+.+.
T Consensus 83 A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLS-YGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HHHTTCHHHHHHHHH-TTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred HHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 888888888888887 788888888888888888887777777777665543
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.84 E-value=3.9e-21 Score=181.68 Aligned_cols=137 Identities=26% Similarity=0.287 Sum_probs=75.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhc-cCCCcHHHHHHH
Q 006802 193 NGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIAR-NNGKTVLHSAAR 271 (630)
Q Consensus 193 ~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d-~~g~tpLh~Aa~ 271 (630)
.|.||||+|+..|+.++++.|++ +.+ ++..|..|.||||+|+..|+.+++++|+++|+++ +..+ .+|.||||+|+.
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHh
Confidence 45566666666666666666665 333 3445555666666666666666666666665554 2333 555666666666
Q ss_pred cCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhc
Q 006802 272 MGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLS 351 (630)
Q Consensus 272 ~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 351 (630)
.|+.+++++|++.++++... |..|+||||+|++.++. ..+.+||++|+..|+.+++++|.+
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~-d~~g~tpl~~A~~~~~~------------------~~~~~~l~~a~~~~~~~i~~~L~~ 180 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVE-DERGLTALELAREILKT------------------TPKGNPMQFGRRIGLEKVINVLEG 180 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCC-CTTSCCHHHHHHHHHHT------------------CCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred cCcHHHHHHHHHcCCCCcCC-CCCCCCHHHHHHHhccC------------------cccccHHHHHHHcCHHHHHHHHHH
Confidence 66666666666655555433 55555555555542211 234455555555555555555544
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.84 E-value=3.5e-21 Score=190.99 Aligned_cols=108 Identities=31% Similarity=0.322 Sum_probs=56.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhc-cCCCcHHHHHHH
Q 006802 193 NGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIAR-NNGKTVLHSAAR 271 (630)
Q Consensus 193 ~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d-~~g~tpLh~Aa~ 271 (630)
.|.||||+|+..|+.++++.|++ +.+ ++..|..|.||||+|+..|+.+++++|+++|+++ +..+ ..|.||||+|+.
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHHH
Confidence 45555555555555555555555 333 3344555555555555555555555555555554 2233 445555555555
Q ss_pred cCCHHHHHHHHhCCCCCCcccCCCCCchhhhhc
Q 006802 272 MGHLEVVKALVSKDPSTGFRTDKKGQTALHMAV 304 (630)
Q Consensus 272 ~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa 304 (630)
.|+.+++++|++.+++++.. |..|.||||+|+
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~~-d~~g~t~l~~A~ 152 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEVE-DERGLTALELAR 152 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTCC-CTTCCCHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCC-CCCCCcHHHHHH
Confidence 55555555555555554432 555555555554
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.83 E-value=1.3e-20 Score=169.02 Aligned_cols=127 Identities=24% Similarity=0.330 Sum_probs=92.1
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHH
Q 006802 189 IPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHS 268 (630)
Q Consensus 189 ~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~ 268 (630)
..+.+|.||||+|+..|+.+++++|++.+.+ ++..|..|.||||+|+..|+.+++++|+++|+++ +..|..|.||||+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~ 82 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSD-PNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPLHD 82 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHHHH
Confidence 4566677777777777777777777777665 3456677777777777777777777777777765 5667777888888
Q ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcC
Q 006802 269 AARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRP 318 (630)
Q Consensus 269 Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~ 318 (630)
|+..|+.+++++|++.++++... |..|.||||+|+..+..+++++|.+.
T Consensus 83 A~~~~~~~~v~~Ll~~ga~~~~~-~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLSYGASRNAV-NIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCC-CTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred HHHcCCHHHHHHHHHcCCCCCCC-CCCCCCHHHHHhhccHHHHHhhcccc
Confidence 88888888888888877777654 77788888888877777777665544
No 95
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.83 E-value=2.7e-20 Score=163.66 Aligned_cols=119 Identities=24% Similarity=0.285 Sum_probs=96.0
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHH
Q 006802 259 RNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAI 338 (630)
Q Consensus 259 d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~ 338 (630)
+..|.||||.|+..|+.+++++|++.++++... |..|+||||+|+..++.+++++|++.+.++ +.+|.+|+||||+|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRT-LEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAV 81 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSC-CTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCcc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHH
Confidence 356778888888888888888888888777654 778888888888888888888888887765 888889999999999
Q ss_pred HhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHH
Q 006802 339 KKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLL 383 (630)
Q Consensus 339 ~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L 383 (630)
..|+.+++++|++ .|++++.+|..|.||||+|. ..++.++|
T Consensus 82 ~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~---~~~~~~ll 122 (123)
T 3aaa_C 82 YEGHVSCVKLLLS-KGADKTVKGPDGLTAFEATD---NQAIKALL 122 (123)
T ss_dssp HHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHCC---CHHHHHHH
T ss_pred HcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHhC---CHHHHHHh
Confidence 9999999999998 79999999999999999983 44444443
No 96
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.83 E-value=5.8e-21 Score=180.52 Aligned_cols=139 Identities=21% Similarity=0.216 Sum_probs=83.0
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHH
Q 006802 157 QEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAA 236 (630)
Q Consensus 157 ~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa 236 (630)
..|.||||+|+..|+.+++++|++ +.+++..+..|.||||+|+..|+.+++++|++.++++....+..|.||||+|+
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE---DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT---TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh---cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 345566666666666666666665 23445556666666666666666666666666665543332356666666666
Q ss_pred HcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhh
Q 006802 237 AQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELI 316 (630)
Q Consensus 237 ~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll 316 (630)
..|+.+++++|+++|+++ +..|.+|.||||+|+..++ ...+.++|++|++.|+.++++.|.
T Consensus 119 ~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~------------------~~~~~~~l~~a~~~~~~~i~~~L~ 179 (183)
T 3deo_A 119 GYVRPEVVEALVELGADI-EVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIGLEKVINVLE 179 (183)
T ss_dssp HTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHHH------------------TCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHcCCCC-cCCCCCCCCHHHHHHHhcc------------------CcccccHHHHHHHcCHHHHHHHHH
Confidence 666666666666666655 4556666666666665322 123456666666666666666665
Q ss_pred c
Q 006802 317 R 317 (630)
Q Consensus 317 ~ 317 (630)
+
T Consensus 180 ~ 180 (183)
T 3deo_A 180 G 180 (183)
T ss_dssp T
T ss_pred H
Confidence 4
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.83 E-value=5.9e-21 Score=186.23 Aligned_cols=137 Identities=27% Similarity=0.312 Sum_probs=113.1
Q ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHH
Q 006802 256 KIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALH 335 (630)
Q Consensus 256 ~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh 335 (630)
...+.+|.||||+|+..|+.++++.|++.+++++.. |..|+||||+|+..|+.+++++|++.....++.+|..|+||||
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~ 145 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGL-DKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALH 145 (222)
T ss_dssp HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHH
T ss_pred cccccccccccccccccCcHHHHHHHHhCCCCcccc-CCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHH
Confidence 345678899999999999999999999999887765 8899999999999999999999999834445999999999999
Q ss_pred HHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC
Q 006802 336 IAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKDH 394 (630)
Q Consensus 336 ~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~~~~~~ 394 (630)
+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.++++.|++.|+.....+
T Consensus 146 ~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~ 203 (222)
T 3ehr_A 146 AAAWKGYADIVQLLLA-KGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSN 203 (222)
T ss_dssp HHHHHTCHHHHHHHHH-HTCCSCCCCTTSCCHHHHCCSHHHHHHHC-------------
T ss_pred HHHHcCCHHHHHHHHH-cCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccc
Confidence 9999999999999999 799999999999999999999999999999999998775443
No 98
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.83 E-value=1.2e-20 Score=187.01 Aligned_cols=110 Identities=30% Similarity=0.399 Sum_probs=53.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccC
Q 006802 227 SCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKG 306 (630)
Q Consensus 227 ~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~ 306 (630)
.|.||||+|+..|+.++++.|++ +.++ +..|..|.||||+|+..|+.+++++|++.+++++...+..|.||||+|+..
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence 34455555555555555555554 4433 334444555555555555555555555554444443224455555555555
Q ss_pred CCHHHHHHhhcCCCCcccccCCCCChHHHHHHH
Q 006802 307 QNEDIVLELIRPDPSVLKLEDNKGNTALHIAIK 339 (630)
Q Consensus 307 g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~ 339 (630)
|+.+++++|++.++++ +.+|..|+||||+|+.
T Consensus 122 g~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 122 VRPEVVEALVELGADI-EVEDERGLTALELARE 153 (244)
T ss_dssp TCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred CCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHH
Confidence 5555555555544443 4445555555555543
No 99
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.83 E-value=2.9e-20 Score=188.00 Aligned_cols=127 Identities=24% Similarity=0.297 Sum_probs=107.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCCCcc-----cCCCCCchhhhhccC---CCHHHHHHhhcCCCCcccccCCCCChHH
Q 006802 263 KTVLHSAARMGHLEVVKALVSKDPSTGFR-----TDKKGQTALHMAVKG---QNEDIVLELIRPDPSVLKLEDNKGNTAL 334 (630)
Q Consensus 263 ~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~-----~d~~g~t~Lh~Aa~~---g~~~iv~~Ll~~~~~~~n~~d~~G~TpL 334 (630)
.++|+.|+..|+.+.+..+++.+++.... .|..|+||||+|+.. ++.+++++|++.++++ |.+|.+|+|||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCCHH
Confidence 45777777777777777777777764332 267788888888888 7888898888888776 88899999999
Q ss_pred HHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Q 006802 335 HIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHS 391 (630)
Q Consensus 335 h~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~~~ 391 (630)
|+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|+++|++..
T Consensus 210 h~A~~~g~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLR-GKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRF 265 (278)
T ss_dssp HHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred HHHHHcCCHHHHHHHHH-cCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 99999999999999998 899999999999999999999999999999999998653
No 100
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.82 E-value=2.8e-20 Score=190.28 Aligned_cols=121 Identities=21% Similarity=0.247 Sum_probs=59.5
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcccc-----CCCCCChHHHHHHHc---CCHHHHHHHHhcCCchhhhhccCCCcHH
Q 006802 195 YDSFHVAAKQGHLEVLKELLGEFPNLVMT-----TDLSCSTALHTAAAQ---GHIDVVNFLLEIDSNLAKIARNNGKTVL 266 (630)
Q Consensus 195 ~t~Lh~A~~~g~~eiv~~Ll~~~~~~~~~-----~d~~g~tpL~~Aa~~---g~~e~v~~LL~~~~~~~~~~d~~g~tpL 266 (630)
.++|+.|+..|+.+.++.|++.++++... .+..|.||||+|+.. |+.+++++|+++|+++ +..|.+|.|||
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~TpL 230 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTAL 230 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCCCHH
T ss_pred HHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCCCHH
Confidence 34555555555555555555555553221 344555555555554 4555555555555443 33444455555
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhc
Q 006802 267 HSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIR 317 (630)
Q Consensus 267 h~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~ 317 (630)
|+|+..|+.+++++|++.++++... |..|.||||+|+..++.+++++|++
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~~~~-d~~G~TpL~~A~~~~~~~iv~~Ll~ 280 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALVGTV-NEAGETALDIARKKHHKECEELLEQ 280 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCCSCC-CTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 5555555555555555544444332 4444444444444444444444444
No 101
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.81 E-value=3.3e-20 Score=189.73 Aligned_cols=146 Identities=18% Similarity=0.112 Sum_probs=107.6
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccc----cCCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCccccCCCC
Q 006802 155 KNQEGETPLYVAAESGHALIVEEMLQHMNLETAS----IPARNGYDSFHVAAKQ---GHLEVLKELLGEFPNLVMTTDLS 227 (630)
Q Consensus 155 ~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~----~~~~~g~t~Lh~A~~~---g~~eiv~~Ll~~~~~~~~~~d~~ 227 (630)
....+.++|+.|+..|+.+.|+.|++.+...... ..+..|.||||+|+.. |+.+++++|++.+++ ++..|..
T Consensus 147 ~~~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-vn~~d~~ 225 (301)
T 2b0o_E 147 RCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAAD 225 (301)
T ss_dssp CCC-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-TTCCCTT
T ss_pred ccCchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-CCCCCCC
Confidence 3445667888888888888888888775443221 1467788888888886 788888888888877 4567788
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCC
Q 006802 228 CSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQ 307 (630)
Q Consensus 228 g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g 307 (630)
|.||||+|+..|+.+++++|+++|+++ +..|.+|.||||+|+..|+.+++++|++.+++ .|.||||+|+..|
T Consensus 226 G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~A~~~g 297 (301)
T 2b0o_E 226 GNTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHVDYSWV 297 (301)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCC-SCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHHHHhcC
Confidence 888888888888888888888888886 67788888888888888888888888887765 4678888888877
Q ss_pred CH
Q 006802 308 NE 309 (630)
Q Consensus 308 ~~ 309 (630)
+.
T Consensus 298 ~~ 299 (301)
T 2b0o_E 298 IS 299 (301)
T ss_dssp --
T ss_pred Cc
Confidence 53
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.81 E-value=1e-20 Score=184.45 Aligned_cols=136 Identities=22% Similarity=0.235 Sum_probs=80.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCcccCCCCCchhhhh
Q 006802 225 DLSCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSK-DPSTGFRTDKKGQTALHMA 303 (630)
Q Consensus 225 d~~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~-~~~~~~~~d~~g~t~Lh~A 303 (630)
+..|.||||+|+..|+.+++++|++.|+++ +..|..|.||||+|+..|+.+++++|++. +.+++.. |..|+||||+|
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~-d~~g~tpL~~A 147 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQ-NKLGDTALHAA 147 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCC-CTTSCCHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCcccc-CCCCCCHHHHH
Confidence 445566666666666666666666666664 45566666777777766667777777666 5555443 66677777777
Q ss_pred ccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCC
Q 006802 304 VKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAG 364 (630)
Q Consensus 304 a~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G 364 (630)
+..|+.+++++|++.++++ +.+|.+|+||||+|+..|+.++++.|++ .+++.+..|..|
T Consensus 148 ~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~l~~l~~-~~~~~~~~~~~~ 206 (222)
T 3ehr_A 148 AWKGYADIVQLLLAKGART-DLRNIEKKLAFDMATNAACASLLKKKQG-TDAVRTLSNAED 206 (222)
T ss_dssp HHHTCHHHHHHHHHHTCCS-CCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred HHcCCHHHHHHHHHcCCCC-ccccCCCCCHHHHhcchhHHHHHHHHhc-cchhhhccchhh
Confidence 7777777777777666654 6667777777777777777777777776 566655555443
No 103
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.81 E-value=3.2e-20 Score=163.17 Aligned_cols=108 Identities=24% Similarity=0.289 Sum_probs=53.3
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccC
Q 006802 227 SCSTALHTAAAQGHIDVVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKG 306 (630)
Q Consensus 227 ~g~tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~ 306 (630)
.|.||||+|+..|+.+++++|++.|.++ +..|..|.||||+|+..|+.+++++|++.+++++.. |..|+||||+|+..
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAP-DKHHITPLLSAVYE 83 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCC-CTTSCCHHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcC-CCCCCCHHHHHHHc
Confidence 3444555555555555555555544443 334444555555555555555555555554444432 44555555555555
Q ss_pred CCHHHHHHhhcCCCCcccccCCCCChHHHHH
Q 006802 307 QNEDIVLELIRPDPSVLKLEDNKGNTALHIA 337 (630)
Q Consensus 307 g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A 337 (630)
++.+++++|++.++++ +.+|.+|+||||+|
T Consensus 84 ~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADK-TVKGPDGLTAFEAT 113 (123)
T ss_dssp TCHHHHHHHHHTTCCT-TCCCTTSCCHHHHC
T ss_pred CCHHHHHHHHHcCCCC-CCcCCCCCCHHHHh
Confidence 5555555555554443 44555555555555
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.79 E-value=3e-19 Score=180.52 Aligned_cols=123 Identities=24% Similarity=0.237 Sum_probs=82.8
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCchh-----hhhccCCCcHHHHHHHc---CCHHHHHHHHhCCCCCCcccCCCCCchhh
Q 006802 230 TALHTAAAQGHIDVVNFLLEIDSNLA-----KIARNNGKTVLHSAARM---GHLEVVKALVSKDPSTGFRTDKKGQTALH 301 (630)
Q Consensus 230 tpL~~Aa~~g~~e~v~~LL~~~~~~~-----~~~d~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh 301 (630)
++|+.|+..|+.+.++.+++.|.+.. +..+..|.||||+|+.. |+.+++++|++.+++++.. |..|+||||
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~-d~~g~TpLh 210 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQ-TGKGSTALH 210 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCC-CTTCCCHHH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCcccc-CCCCCCHHH
Confidence 45666666666666666666655532 22255677777777776 6677777777777666554 667777777
Q ss_pred hhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCC
Q 006802 302 MAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGI 355 (630)
Q Consensus 302 ~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~ 355 (630)
+|+..|+.+++++|++.++++ +.+|.+|.||||+|+..|+.+++++|++ .|+
T Consensus 211 ~A~~~g~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~-~ga 262 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRGKASI-EIANESGETPLDIAKRLKHEHCEELLTQ-ALS 262 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-HHT
T ss_pred HHHHcCCHHHHHHHHHcCCCC-CCccCCCCCHHHHHHHcCCHHHHHHHHH-cCC
Confidence 777777777777777766655 6777777777777777777777777777 444
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.77 E-value=6.5e-19 Score=146.66 Aligned_cols=93 Identities=38% Similarity=0.641 Sum_probs=75.9
Q ss_pred CCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHc
Q 006802 295 KGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKL 374 (630)
Q Consensus 295 ~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~ 374 (630)
+|+||||+|+..|+.+++++|++.+.++ +.+|.+|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHc
Confidence 3677888888777788888887777665 7778888888888888888888888888 7888888888888888888888
Q ss_pred CCHHHHHHHHHcCCC
Q 006802 375 GNTELFSLLKEAGAA 389 (630)
Q Consensus 375 ~~~~iv~~L~~~ga~ 389 (630)
++.+++++|+++||+
T Consensus 79 ~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 79 GHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 888888888888874
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.76 E-value=1e-18 Score=183.04 Aligned_cols=123 Identities=21% Similarity=0.300 Sum_probs=60.6
Q ss_pred CCcHHHHHHHc-CCHHHHHHHHhCCCCCCcccC--CCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHH
Q 006802 262 GKTVLHSAARM-GHLEVVKALVSKDPSTGFRTD--KKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAI 338 (630)
Q Consensus 262 g~tpLh~Aa~~-g~~~iv~~Ll~~~~~~~~~~d--~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~ 338 (630)
+.|+||.|+.. |+.++++.|++.+++++.. + ..|.||||+|+..|+.+++++|++.++++ |.+|..|+||||+|+
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~-~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh~A~ 276 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADVNWV-NGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLHHAT 276 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCC-CTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCCCcc-ccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH
Confidence 34444444444 4444444444444444432 2 44445555555555555555555444433 444555555555555
Q ss_pred HhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 006802 339 KKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAG 387 (630)
Q Consensus 339 ~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~g 387 (630)
..|+.+++++|++ .|++++..|..|.||||+|+..++.+++++|+++|
T Consensus 277 ~~g~~~~v~~LL~-~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~ 324 (368)
T 3jue_A 277 ILGHTGLACLFLK-RGADLGARDSEGRDPLTIAMETANADIVTLLRLAK 324 (368)
T ss_dssp HHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HcCcHHHHHHHHH-CcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 5555555555554 45555555555555555555555555555555444
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.75 E-value=2.5e-18 Score=188.47 Aligned_cols=133 Identities=23% Similarity=0.219 Sum_probs=92.3
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCchhhhh------ccCCCcHHHHHHH---cCCHHHHHHHHhCCCCCCcccCCCCCchh
Q 006802 230 TALHTAAAQGHIDVVNFLLEIDSNLAKIA------RNNGKTVLHSAAR---MGHLEVVKALVSKDPSTGFRTDKKGQTAL 300 (630)
Q Consensus 230 tpL~~Aa~~g~~e~v~~LL~~~~~~~~~~------d~~g~tpLh~Aa~---~g~~~iv~~Ll~~~~~~~~~~d~~g~t~L 300 (630)
+.||.|+..|+.+.++.|++.|+++ +.. +..|.||||+|+. .|+.+++++|++.+++++.. |..|+|||
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~-d~~g~TpL 211 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAK-AADGNTAL 211 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCC-CSSSCCHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCcc-CCCCCcHH
Confidence 5566666666666666666666665 222 5677777777755 77778888888877777654 77788888
Q ss_pred hhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHH
Q 006802 301 HMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAE 372 (630)
Q Consensus 301 h~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~ 372 (630)
|+|+..|+.+++++|++.|+++ +.+|.+|+||||+|+..|+.+++++|++ .|++++. +|+|.+.
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll~-~ga~~~~------~~~h~~~ 275 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQ-AQAGTFA------FPLHVDY 275 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCC-SCCCTTCCCHHHHHHHTTCHHHHHHHHH-TCC-----------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH-hCCCCCC------Ccceeec
Confidence 8888888888888888887765 7788888888888888888888888888 7887766 4555544
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.75 E-value=2.4e-18 Score=180.25 Aligned_cols=147 Identities=17% Similarity=0.219 Sum_probs=116.1
Q ss_pred CCCCChHHHHHHHc-CCHHHHHHHHhcCCchhhhhc--cCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhh
Q 006802 225 DLSCSTALHTAAAQ-GHIDVVNFLLEIDSNLAKIAR--NNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALH 301 (630)
Q Consensus 225 d~~g~tpL~~Aa~~-g~~e~v~~LL~~~~~~~~~~d--~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh 301 (630)
+..+.|+||.|+.. |+.++++.|++.|+++ +..+ ..|.||||+|+..|+.+++++|++.+++++.. |..|+||||
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~-d~~G~TpLh 273 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQA-DSAGRGPLH 273 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCC-CCCCCCHHH
Confidence 44567899999999 9999999999999997 5566 78999999999999999999999999998865 999999999
Q ss_pred hhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhccc--CCCcccccCCCCCHHHHHHHc
Q 006802 302 MAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIE--GIDVNSLNKAGESPLDVAEKL 374 (630)
Q Consensus 302 ~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~--g~~in~~n~~G~TpL~~A~~~ 374 (630)
+|+..|+.+++++|++.++++ +.+|.+|+||||+|+..|+.+++++|+... +.+....+..+.|+++++...
T Consensus 274 ~A~~~g~~~~v~~LL~~Gad~-~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 274 HATILGHTGLACLFLKRGADL-GARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred HHHHcCcHHHHHHHHHCcCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 999999999999999999877 899999999999999999999999999732 233445567788888877654
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.75 E-value=2.4e-18 Score=149.16 Aligned_cols=109 Identities=37% Similarity=0.506 Sum_probs=87.1
Q ss_pred hhccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHH
Q 006802 257 IARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHI 336 (630)
Q Consensus 257 ~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~ 336 (630)
..|.+|.||||+|+..|+.+++++|++.++++... |..|.||||+|+..++.+++++|++.++++ +.+|..|+||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNAR-SKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCC-CSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHHH
Confidence 35677888888888888888888888888776654 778888888888888888888888887765 7788888888888
Q ss_pred HHHhCcHHHHHHHhcccCCCcccccCCCCCHH
Q 006802 337 AIKKGRTQIVRCLLSIEGIDVNSLNKAGESPL 368 (630)
Q Consensus 337 A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL 368 (630)
|+..|+.+++++|++ .|+++|.++..|.||-
T Consensus 82 A~~~~~~~~~~~Ll~-~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDA-KGADVNARSWGSSHHH 112 (115)
T ss_dssp HHTTTCHHHHHHHHT-TSSSHHHHSCCCC---
T ss_pred HHHCCCHHHHHHHHH-cCCCCCcCCccccccc
Confidence 888888888888888 7888888888887763
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.75 E-value=3.8e-18 Score=187.04 Aligned_cols=129 Identities=26% Similarity=0.252 Sum_probs=116.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCCCcc-----cCCCCCchhhhh---ccCCCHHHHHHhhcCCCCcccccCCCCChHH
Q 006802 263 KTVLHSAARMGHLEVVKALVSKDPSTGFR-----TDKKGQTALHMA---VKGQNEDIVLELIRPDPSVLKLEDNKGNTAL 334 (630)
Q Consensus 263 ~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~-----~d~~g~t~Lh~A---a~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpL 334 (630)
.+.||.|+..|+.+.++.|++.+++++.. .|..|.||||+| +..|+.+++++|++.++++ |.+|.+|+|||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~TpL 211 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTAL 211 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCCHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCcHH
Confidence 36799999999999999999999987643 377899999999 5599999999999999876 99999999999
Q ss_pred HHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc
Q 006802 335 HIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVAEKLGNTELFSLLKEAGAAHSKD 393 (630)
Q Consensus 335 h~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A~~~~~~~iv~~L~~~ga~~~~~ 393 (630)
|+|+..|+.++|++|++ .|++++.+|..|.||||+|+..|+.+++++|+++|++....
T Consensus 212 h~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLK-GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp HHHTTTTCHHHHHHHHH-TCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred HHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 99999999999999999 89999999999999999999999999999999999997653
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.74 E-value=5.7e-18 Score=140.90 Aligned_cols=93 Identities=40% Similarity=0.638 Sum_probs=69.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHh
Q 006802 261 NGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKK 340 (630)
Q Consensus 261 ~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~ 340 (630)
+|+||||+|+..|+.+++++|++.+++++.. |..|+||||+|+..|+.+++++|++.++++ +.+|.+|+||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~-d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAK-DKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHc
Confidence 3677777777777777777777777776654 777777777777777777777777777665 77788888888888888
Q ss_pred CcHHHHHHHhcccCCC
Q 006802 341 GRTQIVRCLLSIEGID 356 (630)
Q Consensus 341 g~~~iv~~Ll~~~g~~ 356 (630)
|+.+++++|++ .|++
T Consensus 79 ~~~~~~~~Ll~-~ga~ 93 (93)
T 1n0q_A 79 GHLEVVKLLLE-AGAY 93 (93)
T ss_dssp TCHHHHHHHHH-TTCC
T ss_pred CCHHHHHHHHH-cCCC
Confidence 88888888887 5653
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.71 E-value=7.1e-18 Score=146.13 Aligned_cols=107 Identities=35% Similarity=0.517 Sum_probs=99.2
Q ss_pred cCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHH
Q 006802 292 TDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVA 371 (630)
Q Consensus 292 ~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A 371 (630)
+|..|+||||+|+..|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLA-KGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTT-TTCCTTCCCTTCCCTTHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHH-cCCCCcccCCCCCCHHHHH
Confidence 5889999999999999999999999998875 8899999999999999999999999999 8999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCch
Q 006802 372 EKLGNTELFSLLKEAGAAHSKDHGKPPSA 400 (630)
Q Consensus 372 ~~~~~~~iv~~L~~~ga~~~~~~~~~~~~ 400 (630)
+..++.+++++|+++|++.+.....+.++
T Consensus 83 ~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp HTTTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HHCCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 99999999999999999988776665544
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.62 E-value=6e-16 Score=132.99 Aligned_cols=90 Identities=29% Similarity=0.457 Sum_probs=66.8
Q ss_pred cCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHHHHhCcHHHHHHHhcccCCCcccccCCCCCHHHHH
Q 006802 292 TDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIAIKKGRTQIVRCLLSIEGIDVNSLNKAGESPLDVA 371 (630)
Q Consensus 292 ~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g~~in~~n~~G~TpL~~A 371 (630)
.|.+|.||||+|+..|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLE-AGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccccCCCcHHHHH
Confidence 4666777777777777777777777766554 6677777888888888888888888877 6777777777888888888
Q ss_pred HHcCCHHHHHHH
Q 006802 372 EKLGNTELFSLL 383 (630)
Q Consensus 372 ~~~~~~~iv~~L 383 (630)
+..++.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 888887777766
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.58 E-value=3.3e-15 Score=128.34 Aligned_cols=90 Identities=28% Similarity=0.430 Sum_probs=63.0
Q ss_pred hccCCCcHHHHHHHcCCHHHHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCCcccccCCCCChHHHHH
Q 006802 258 ARNNGKTVLHSAARMGHLEVVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPSVLKLEDNKGNTALHIA 337 (630)
Q Consensus 258 ~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~~~n~~d~~G~TpLh~A 337 (630)
.|.+|.||||+|+..|+.+++++|++.+++++.. |..|.||||+|+..|+.+++++|++.+.++ +.+|..|+||||+|
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~-d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADVAAK-DKNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDKFGKTAFDIS 97 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCCCcHHHHH
Confidence 4556677777777777777777777776666544 667777777777777777777777776654 66777777777777
Q ss_pred HHhCcHHHHHHH
Q 006802 338 IKKGRTQIVRCL 349 (630)
Q Consensus 338 ~~~g~~~iv~~L 349 (630)
+..|+.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 777777777765
No 115
>3rko_J NADH-quinone oxidoreductase subunit J; complex I, proton pump, membrane protein, Na ubiquinone, cytoplasmic membrane; HET: LFA CA7; 3.00A {Escherichia coli}
Probab=57.86 E-value=22 Score=32.11 Aligned_cols=17 Identities=24% Similarity=0.632 Sum_probs=10.9
Q ss_pred HHHHHhHHHHHHHHHHH
Q 006802 496 IFFVFDSLALFISLAVV 512 (630)
Q Consensus 496 ~F~~~~~~a~~~S~~~~ 512 (630)
+|+++-.++..+++.++
T Consensus 4 ~F~~~a~~~i~~al~vv 20 (184)
T 3rko_J 4 AFYICGLIAILATLRVI 20 (184)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 56666777777665444
No 116
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=54.51 E-value=6.2 Score=26.54 Aligned_cols=28 Identities=29% Similarity=0.436 Sum_probs=18.7
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhheee
Q 006802 560 SRWLAVSATVIGGTIMLTTIGSMCYCVI 587 (630)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (630)
..-.+|...++|+++.+.++....++++
T Consensus 7 s~~~aIA~gVVgGv~~v~ii~~~~~~~~ 34 (44)
T 2l2t_A 7 ARTPLIAAGVIGGLFILVIVGLTFAVYV 34 (44)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcceEEEeehHHHHHHHHHHHHHHHHh
Confidence 4446788888888777776665555554
No 117
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=44.20 E-value=5.1 Score=26.98 Aligned_cols=27 Identities=7% Similarity=0.202 Sum_probs=17.5
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhheee
Q 006802 561 RWLAVSATVIGGTIMLTTIGSMCYCVI 587 (630)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (630)
.-.+|...++++++++.++....++++
T Consensus 9 ~~~~IA~gVVgGv~~~~ii~~~~~~~~ 35 (44)
T 2ks1_B 9 KIPSIATGMVGALLLLLVVALGIGLFM 35 (44)
T ss_dssp CSSSSTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEeehhHHHHHHHHHHHHHHHHh
Confidence 335677788887777766665555554
No 118
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=43.13 E-value=22 Score=35.83 Aligned_cols=164 Identities=14% Similarity=0.130 Sum_probs=80.7
Q ss_pred CCCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccc-cccCCCC
Q 006802 115 SPGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLET-ASIPARN 193 (630)
Q Consensus 115 ~~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~-~~~~~~~ 193 (630)
..|..|+..+......|+.+....+++..... -.--..+..|.-.+.-+......+-...+++...+.. .-..|..
T Consensus 68 ~~d~~gn~vvQklle~~~~~~~~~i~~~i~g~---~~~l~~~~~G~rvvQk~le~~~~~~~~~i~~el~~~~~~L~~d~~ 144 (351)
T 3gvo_A 68 MTDVFGNYVIQKFFEFGSLDQKLALATRIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQN 144 (351)
T ss_dssp HTSTTHHHHHHHHHHHCCHHHHHHHHHHHTTC---HHHHHTSTTHHHHHHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTT
T ss_pred HhChhhhHHHHHHHhhCCHHHHHHHHHHHHhh---HHHHhhCHHhHHHHHHHHHhCCHHHHHHHHHHhhhhHHHHHHhhh
Confidence 35777877887777788777777776653321 1112346677777777777777666666665422211 1124555
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCc--cccCCCCCChHHHHHHHcCCHH----HHHHHHhcCCchhhhhccCCCcHHH
Q 006802 194 GYDSFHVAAKQGHLEVLKELLGEFPNL--VMTTDLSCSTALHTAAAQGHID----VVNFLLEIDSNLAKIARNNGKTVLH 267 (630)
Q Consensus 194 g~t~Lh~A~~~g~~eiv~~Ll~~~~~~--~~~~d~~g~tpL~~Aa~~g~~e----~v~~LL~~~~~~~~~~d~~g~tpLh 267 (630)
|+..+..+...+..+..+.+++.-... .-..+..|...+..+......+ +++.|..+ -..-..|..|...+.
T Consensus 145 Gn~ViQk~l~~~~~~~~~~i~~~~~~~~~~ls~~~~G~~Vvq~~le~~~~~~~~~ii~~l~~~--~~~L~~d~~Gn~ViQ 222 (351)
T 3gvo_A 145 GNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQH--TEQLVQDQYGNYVIQ 222 (351)
T ss_dssp HHHHHHHHHHHSCGGGTHHHHHHTTTTHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHTT--HHHHHTSTTHHHHHH
T ss_pred hhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCcHhHHHHHHHHHHCCHHHHHHHHHHHhhh--HHhcCCCchHHHHHH
Confidence 655555555544443333333322110 1122334444444443333322 22222211 111234556666666
Q ss_pred HHHHcCCHHHHHHHHh
Q 006802 268 SAARMGHLEVVKALVS 283 (630)
Q Consensus 268 ~Aa~~g~~~iv~~Ll~ 283 (630)
.....+..+..+.+++
T Consensus 223 ~~l~~~~~~~~~~i~~ 238 (351)
T 3gvo_A 223 HVLEHGRPEDKSKIVS 238 (351)
T ss_dssp HHHHHSCHHHHHHHHH
T ss_pred HHHHhCchhhHHHHHH
Confidence 6666665555444444
No 119
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=42.44 E-value=17 Score=27.88 Aligned_cols=27 Identities=15% Similarity=0.337 Sum_probs=17.5
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhheee
Q 006802 561 RWLAVSATVIGGTIMLTTIGSMCYCVI 587 (630)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (630)
..++|+..+++++++++++..+++.++
T Consensus 9 n~~~Iv~gvi~gilliGllllliwk~~ 35 (79)
T 2knc_B 9 DILVVLLSVMGAILLIGLAALLIWKLL 35 (79)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666777777777777765555443
No 120
>3k49_A MRNA-binding protein PUF3; PUF3, pumilio, RNA binding, mitochondrial mRNA,, membrane, mitochondrion; HET: CIT; 2.50A {Saccharomyces cerevisiae} SCOP: a.118.1.0 PDB: 3k4e_A
Probab=37.26 E-value=60 Score=32.76 Aligned_cols=227 Identities=11% Similarity=0.087 Sum_probs=95.1
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccc-cCCCCCCcHH
Q 006802 120 GDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETAS-IPARNGYDSF 198 (630)
Q Consensus 120 g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~-~~~~~g~t~L 198 (630)
|.-.+..+...++.+....+++...+. ..--..|..|...+.-....+..+....+++...+.... ..+..|.-.+
T Consensus 42 gsR~lQ~~l~~~~~~~~~~I~~el~~~---~~~L~~d~~gn~vvQkll~~~~~~~~~~i~~~~~g~~~~L~~~~~G~rVl 118 (369)
T 3k49_A 42 GSRFIQRELATSPASEKEVIFNEIRDD---AIELSNDVFGNYVIQKFFEFGSKIQKNTLVDQFKGNMKQLSLQMYACRVI 118 (369)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHGGG---HHHHHHSTTTHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHHSTTHHHHH
T ss_pred chHHHHHHhccCCHHHHHHHHHHHHHH---HHHHhhCcccccHHHHHHHhCCHHHHHHHHHHHhhhHHHHhcChhhHHHH
Confidence 334444455555555555554442211 112235677777777777777777666666542221111 1234444444
Q ss_pred HHHHHcCCHHHHHHHHhcC-CCc-cccCCCCCChHHHHHHHcCCHHHHHHHHhc--CCchhhhhccCCCcHHHHHHHcCC
Q 006802 199 HVAAKQGHLEVLKELLGEF-PNL-VMTTDLSCSTALHTAAAQGHIDVVNFLLEI--DSNLAKIARNNGKTVLHSAARMGH 274 (630)
Q Consensus 199 h~A~~~g~~eiv~~Ll~~~-~~~-~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~--~~~~~~~~d~~g~tpLh~Aa~~g~ 274 (630)
..+......+-...+++.- +.. .-..|..|...+......+..+..+.+++. |.-..-..+..|...+......+.
T Consensus 119 Qk~le~~~~~q~~~ii~el~~~~~~L~~d~~Gn~ViQ~~l~~~~~~~~~~i~~~~~~~~~~ls~~~~Gs~Vvq~~l~~~~ 198 (369)
T 3k49_A 119 QKALEYIDSNQRIELVLELSDSVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGS 198 (369)
T ss_dssp HHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHHHHHHHHHHSCGGGCHHHHHHHTTTHHHHHTSTTHHHHHHHHHHHSC
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHhcCcccchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhCCCccCcHHHHHHHhCC
Confidence 4444444443333333221 111 112344444444444443332211212111 000001123445555555555555
Q ss_pred HHHHHHHHhCCCCC--CcccCCCCCchhhhhccCCCH----------HHHHHhhcCCCCcccccCCCCChHHHHHHHhCc
Q 006802 275 LEVVKALVSKDPST--GFRTDKKGQTALHMAVKGQNE----------DIVLELIRPDPSVLKLEDNKGNTALHIAIKKGR 342 (630)
Q Consensus 275 ~~iv~~Ll~~~~~~--~~~~d~~g~t~Lh~Aa~~g~~----------~iv~~Ll~~~~~~~n~~d~~G~TpLh~A~~~g~ 342 (630)
.+.-+.+++.-.+. ....|..|.-.+..+...+.. .+++.+..+-.. =..++.|...+..+...+.
T Consensus 199 ~~~~~~i~~~l~~~~~~L~~d~~GnyViQ~~l~~~~~~~~~~~~~~~~i~~~l~~~~~~--Ls~~k~gS~Vvek~l~~~~ 276 (369)
T 3k49_A 199 SEDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANNVVE--YSKHKFASNVVEKSILYGS 276 (369)
T ss_dssp HHHHHHHHHTTTTCHHHHHHSTTHHHHHHHHHTCCTTSCHHHHHHHHHHHHHHHTTHHH--HHTSTTHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhcCCchhhhhHhHHHHHHHHHHHHHHH--HHhhhHhhHHHHHHHHhCC
Confidence 44444444321110 011244444444444433321 122222221111 1235566666666666666
Q ss_pred HHHHHHHhc
Q 006802 343 TQIVRCLLS 351 (630)
Q Consensus 343 ~~iv~~Ll~ 351 (630)
.+.-+.+++
T Consensus 277 ~~~r~~ii~ 285 (369)
T 3k49_A 277 KNQKDLIIS 285 (369)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 655555554
No 121
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=36.25 E-value=20 Score=36.08 Aligned_cols=221 Identities=8% Similarity=0.043 Sum_probs=105.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccc-cCCCCCCcH
Q 006802 119 RGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETAS-IPARNGYDS 197 (630)
Q Consensus 119 ~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~-~~~~~g~t~ 197 (630)
.|...|......++.+....+++...+. ..--..|..|+..+.-....|..+....+++...+.... ..+..|.-.
T Consensus 36 ~gsR~lQ~~l~~~~~~~~~~i~~ei~~~---~~~L~~d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~rv 112 (351)
T 3gvo_A 36 HGSRFIQQKLERATPAERQIVFNEILQA---AYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRV 112 (351)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHGGG---HHHHHTSTTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHHH
T ss_pred cchHHHHHHHhhCCHHHHHHHHHHHHHh---HHHHHhChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHHH
Confidence 3444455555556656555555543321 112246788888888888888888887777653322211 245566666
Q ss_pred HHHHHHcCCHHHHHHHHhcCC-Cc-cccCCCCCChHHHHHHHcCCHHHHHHHHhcCC-chhh-hhccCCCcHHHHHHHcC
Q 006802 198 FHVAAKQGHLEVLKELLGEFP-NL-VMTTDLSCSTALHTAAAQGHIDVVNFLLEIDS-NLAK-IARNNGKTVLHSAARMG 273 (630)
Q Consensus 198 Lh~A~~~g~~eiv~~Ll~~~~-~~-~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~-~~~~-~~d~~g~tpLh~Aa~~g 273 (630)
+..+......+-...+++.-. .. .-..|..|...+......+..+..+.+++.-. .... ..+..|...+..+....
T Consensus 113 vQk~le~~~~~~~~~i~~el~~~~~~L~~d~~Gn~ViQk~l~~~~~~~~~~i~~~~~~~~~~ls~~~~G~~Vvq~~le~~ 192 (351)
T 3gvo_A 113 IQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHC 192 (351)
T ss_dssp HHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHHHHHHHHHHSCGGGTHHHHHHTTTTHHHHHTSTTHHHHHHHHHHHS
T ss_pred HHHHHHhCCHHHHHHHHHHhhhhHHHHHHhhhhhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCcHhHHHHHHHHHHC
Confidence 666666666554444443321 11 11235555555555444444333333332211 1111 12333444444444433
Q ss_pred CHH----HHHHHHhCCCCCCcccCCCCCchhhhhccCCCHHHHHHhhcCCCC-c-ccccCCCCChHHHHHHHhCcHH
Q 006802 274 HLE----VVKALVSKDPSTGFRTDKKGQTALHMAVKGQNEDIVLELIRPDPS-V-LKLEDNKGNTALHIAIKKGRTQ 344 (630)
Q Consensus 274 ~~~----iv~~Ll~~~~~~~~~~d~~g~t~Lh~Aa~~g~~~iv~~Ll~~~~~-~-~n~~d~~G~TpLh~A~~~g~~~ 344 (630)
..+ +++.|..... ....|..|.-.+......+..+....+++.-.. + -=..+..|...+..+...+..+
T Consensus 193 ~~~~~~~ii~~l~~~~~--~L~~d~~Gn~ViQ~~l~~~~~~~~~~i~~~l~~~~~~Ls~~k~gs~Vvek~l~~~~~~ 267 (351)
T 3gvo_A 193 TAEQTLPILEELHQHTE--QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRA 267 (351)
T ss_dssp CHHHHHHHHHHHHTTHH--HHHTSTTHHHHHHHHHHHSCHHHHHHHHHTTTTCHHHHHTSTTHHHHHHHHHHHSCHH
T ss_pred CHHHHHHHHHHHhhhHH--hcCCCchHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhCCHH
Confidence 322 3333322111 112355666666666666655544444433111 1 0123555666666666555544
No 122
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=33.91 E-value=1.7e+02 Score=28.91 Aligned_cols=42 Identities=12% Similarity=-0.012 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc---cCCcchhhHHHHHHHH
Q 006802 531 FVINKLMWLACLFISIAFISLTYVVV---GEHSRWLAVSATVIGG 572 (630)
Q Consensus 531 ~~~~~l~~~~~~~~~~af~~~~~~~~---~~~~~~~~~~~~~~~~ 572 (630)
.....|-.++.+|+...|++|+|=+= -|...|..-+.++++.
T Consensus 277 ~~mk~LTiit~IflP~T~IaGiyGMNf~~mPel~~~~gy~~~l~~ 321 (339)
T 4ev6_A 277 QIMKILTMVTTIFAVPMWITGIYGMNFSYLPLANNPQGFWLVMAL 321 (339)
T ss_dssp HHHHHHHHHHHHSSHHHHHHHHTTCCCSCCTTSSCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCcCCCCCCccCchHHHHHHHH
Confidence 34456677888999999999999761 2445554444444443
No 123
>3k49_A MRNA-binding protein PUF3; PUF3, pumilio, RNA binding, mitochondrial mRNA,, membrane, mitochondrion; HET: CIT; 2.50A {Saccharomyces cerevisiae} SCOP: a.118.1.0 PDB: 3k4e_A
Probab=30.25 E-value=63 Score=32.57 Aligned_cols=153 Identities=14% Similarity=0.069 Sum_probs=73.4
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccc-cccCCCCC
Q 006802 116 PGKRGDLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLET-ASIPARNG 194 (630)
Q Consensus 116 ~~~~g~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~-~~~~~~~g 194 (630)
.|..|+..+......|..+....+++..... ... -..+..|.-.+.-+......+-...+++...+.. .-..|..|
T Consensus 74 ~d~~gn~vvQkll~~~~~~~~~~i~~~~~g~-~~~--L~~~~~G~rVlQk~le~~~~~q~~~ii~el~~~~~~L~~d~~G 150 (369)
T 3k49_A 74 NDVFGNYVIQKFFEFGSKIQKNTLVDQFKGN-MKQ--LSLQMYACRVIQKALEYIDSNQRIELVLELSDSVLQMIKDQNG 150 (369)
T ss_dssp HSTTTHHHHHHHHHHCCHHHHHHHHHHHTTC-HHH--HHHSTTHHHHHHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTH
T ss_pred hCcccccHHHHHHHhCCHHHHHHHHHHHhhh-HHH--HhcChhhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCccc
Confidence 4677777777777777777666666553321 111 1235566666666666666655555554421111 11245555
Q ss_pred CcHHHHHHHcCCHH----HHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhcCC--chhhhhccCCCcHHHH
Q 006802 195 YDSFHVAAKQGHLE----VLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEIDS--NLAKIARNNGKTVLHS 268 (630)
Q Consensus 195 ~t~Lh~A~~~g~~e----iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~~~--~~~~~~d~~g~tpLh~ 268 (630)
+..+......+..+ +++.+..+-. ....+..|...+......+..+.-+.+++.=. -..-..|..|...+..
T Consensus 151 n~ViQ~~l~~~~~~~~~~i~~~~~~~~~--~ls~~~~Gs~Vvq~~l~~~~~~~~~~i~~~l~~~~~~L~~d~~GnyViQ~ 228 (369)
T 3k49_A 151 NHVIQKAIETIPIEKLPFILSSLTGHIY--HLSTHSYGCRVIQRLLEFGSSEDQESILNELKDFIPYLIQDQYGNYVIQY 228 (369)
T ss_dssp HHHHHHHHHHSCGGGCHHHHHHHTTTHH--HHHTSTTHHHHHHHHHHHSCHHHHHHHHHTTTTCHHHHHHSTTHHHHHHH
T ss_pred chHHHHHHHhCCHHHHHHHHHHHHHHHH--HHhCCCccCcHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 55555555444332 2222221111 11234555555555555555544444443211 1112245555555555
Q ss_pred HHHcC
Q 006802 269 AARMG 273 (630)
Q Consensus 269 Aa~~g 273 (630)
+...+
T Consensus 229 ~l~~~ 233 (369)
T 3k49_A 229 VLQQD 233 (369)
T ss_dssp HHTCC
T ss_pred HHhcC
Confidence 55444
No 124
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=28.51 E-value=68 Score=22.52 Aligned_cols=23 Identities=26% Similarity=0.260 Sum_probs=16.4
Q ss_pred cchhhHHHHHHHHHHHHHHHHhh
Q 006802 560 SRWLAVSATVIGGTIMLTTIGSM 582 (630)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~ 582 (630)
.+|..|.+.+++++.++.++..+
T Consensus 10 vp~wiIi~svl~GLllL~li~~~ 32 (54)
T 2knc_A 10 IPIWWVLVGVLGGLLLLTILVLA 32 (54)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHH
Confidence 56777778888887777666543
No 125
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=28.32 E-value=70 Score=22.42 Aligned_cols=23 Identities=9% Similarity=0.121 Sum_probs=16.5
Q ss_pred cchhhHHHHHHHHHHHHHHHHhh
Q 006802 560 SRWLAVSATVIGGTIMLTTIGSM 582 (630)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~ 582 (630)
.+|..|.+.+++++.++.+++..
T Consensus 7 vp~WiIi~svl~GLLLL~Lii~~ 29 (54)
T 2l8s_A 7 VPLWVILLSAFAGLLLLMLLILA 29 (54)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHH
Confidence 46777778888887777666543
No 126
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=26.37 E-value=1.7e+02 Score=29.28 Aligned_cols=41 Identities=24% Similarity=0.366 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh---ccCCcchhhHHHHHHH
Q 006802 531 FVINKLMWLACLFISIAFISLTYVV---VGEHSRWLAVSATVIG 571 (630)
Q Consensus 531 ~~~~~l~~~~~~~~~~af~~~~~~~---~~~~~~~~~~~~~~~~ 571 (630)
.....|-.++.+|+...|++|+|=+ ..|...|-.-+.++++
T Consensus 301 ~imk~LTiit~IflP~T~IaGiyGMNf~~mPel~~~~Gy~~~l~ 344 (363)
T 2iub_A 301 EVMKVLTIIATIFMPLTFIAGIYGMNFEYMPELRWKWGYPVVLA 344 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCC--------------CHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCCCCcccCcHHHHHHHH
Confidence 4455677789999999999999865 1344555443444444
No 127
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=25.63 E-value=46 Score=21.47 Aligned_cols=24 Identities=8% Similarity=0.016 Sum_probs=11.8
Q ss_pred hHHHHHHHHHHHHHHHHhhhheee
Q 006802 564 AVSATVIGGTIMLTTIGSMCYCVI 587 (630)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~ 587 (630)
+|.-.++|+++.+.++..+++|+.
T Consensus 12 aIAGiVvG~v~gv~li~~l~~~~~ 35 (38)
T 2k1k_A 12 EIVAVIFGLLLGAALLLGILVFRS 35 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeehHHHHHHHHHHHHHHHHe
Confidence 344445555544555555555444
No 128
>4a01_A Proton pyrophosphatase; hydrolase, membrane protein, proton pumping; HET: DMU; 2.35A {Vigna radiata}
Probab=25.03 E-value=1.9e+02 Score=31.70 Aligned_cols=58 Identities=12% Similarity=0.138 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-----------cchhhHHHHHHHHHHHHHHHHhhhhee
Q 006802 529 LVFVINKLMWLACLFISIAFISLTYVVVGEH-----------SRWLAVSATVIGGTIMLTTIGSMCYCV 586 (630)
Q Consensus 529 ~~~~~~~l~~~~~~~~~~af~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (630)
....+++..|.+...+.+++...++..+... ..|+.++.+++.+++.-.++..+.-++
T Consensus 357 ~~~aL~~g~~~s~il~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~Gl~~g~lI~~iTeYy 425 (766)
T 4a01_A 357 IEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGFVTEYY 425 (766)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCSEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3455667788888877777776677766421 235566666666666555555444433
No 129
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=24.56 E-value=31 Score=23.14 Aligned_cols=11 Identities=18% Similarity=0.435 Sum_probs=6.2
Q ss_pred chhhHHHHHHH
Q 006802 561 RWLAVSATVIG 571 (630)
Q Consensus 561 ~~~~~~~~~~~ 571 (630)
+-.+|...++|
T Consensus 10 ~~~~Ia~~vVG 20 (44)
T 2jwa_A 10 PLTSIISAVVG 20 (44)
T ss_dssp SHHHHHHHHHH
T ss_pred cccchHHHHHH
Confidence 34556566666
No 130
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=24.45 E-value=3.7e+02 Score=23.81 Aligned_cols=131 Identities=15% Similarity=0.128 Sum_probs=84.4
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHH
Q 006802 121 DLQLHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHV 200 (630)
Q Consensus 121 ~T~Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~ 200 (630)
++-+-+|...|+++....+.+........ ...=..|...|+.++++.-..+.+ |.. ..+.+
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~l~~~~~W----------k~Lg~~AL~~gn~~lAe~cy~~~~-------D~~--~L~~L 69 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKKLNDSITW----------ERLIQEALAQGNASLAEMIYQTQH-------SFD--KLSFL 69 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHCCHHHH----------HHHHHHHHHTTCHHHHHHHHHHTT-------CHH--HHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHhCCHHHH----------HHHHHHHHHcCChHHHHHHHHHhC-------CHH--HHHHH
Confidence 56788999999999998887654332111 223456778999999999888732 111 34455
Q ss_pred HHHcCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHH-HHHHHHhcCCchhhhhccCCCcHHHHHHHcCCHHHHH
Q 006802 201 AAKQGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHID-VVNFLLEIDSNLAKIARNNGKTVLHSAARMGHLEVVK 279 (630)
Q Consensus 201 A~~~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e-~v~~LL~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~ 279 (630)
....|+.+-++.+.+... ...+....++.+...|+.+ +++.|.+.|.-. -+...|-.+|..++.+
T Consensus 70 y~~tg~~e~L~kla~iA~-----~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~---------eA~~~A~t~g~~~~a~ 135 (177)
T 3mkq_B 70 YLVTGDVNKLSKMQNIAQ-----TREDFGSMLLNTFYNNSTKERSSIFAEGGSLP---------LAYAVAKANGDEAAAS 135 (177)
T ss_dssp HHHHTCHHHHHHHHHHHH-----HTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHH---------HHHHHHHHTTCHHHHH
T ss_pred HHHhCCHHHHHHHHHHHH-----HCccHHHHHHHHHHcCCHHHHHHHHHHCCChH---------HHHHHHHHcCcHHHHH
Confidence 566788777776643210 1122346788888888875 555555543321 2456777889999999
Q ss_pred HHHhC
Q 006802 280 ALVSK 284 (630)
Q Consensus 280 ~Ll~~ 284 (630)
.+++.
T Consensus 136 ~~~~~ 140 (177)
T 3mkq_B 136 AFLEQ 140 (177)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98865
No 131
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=24.29 E-value=99 Score=20.44 Aligned_cols=24 Identities=25% Similarity=0.236 Sum_probs=16.7
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhh
Q 006802 560 SRWLAVSATVIGGTIMLTTIGSMC 583 (630)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~ 583 (630)
.+|..|.+.+++++.++.++....
T Consensus 8 vp~wiIi~s~l~GLllL~li~~~L 31 (42)
T 2k1a_A 8 IPIWWVLVGVLGGLLLLTILVLAM 31 (42)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHH
Confidence 467777788888877777665443
No 132
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=23.10 E-value=3.1e+02 Score=24.37 Aligned_cols=100 Identities=16% Similarity=0.071 Sum_probs=67.1
Q ss_pred HHHHHHcCCHHHHHHHHHhcChhhhhHHhhcCCCCCCcHHHHHHHhCCHHHHHHHHhcCCccccccCCCCCCcHHHHHHH
Q 006802 124 LHLAARAGNLSRVMEILQSCDANEAKDLLSKKNQEGETPLYVAAESGHALIVEEMLQHMNLETASIPARNGYDSFHVAAK 203 (630)
Q Consensus 124 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~l~~~n~~g~TpLh~Aa~~g~~eiv~~LL~~~~~~~~~~~~~~g~t~Lh~A~~ 203 (630)
=..|...|+.++++....+..+. ...+.+....|+.+-++.|.+.. ....+-+.+++.+..
T Consensus 41 g~~AL~~gn~~lAe~cy~~~~D~-------------~~L~~Ly~~tg~~e~L~kla~iA------~~~g~~n~af~~~l~ 101 (177)
T 3mkq_B 41 IQEALAQGNASLAEMIYQTQHSF-------------DKLSFLYLVTGDVNKLSKMQNIA------QTREDFGSMLLNTFY 101 (177)
T ss_dssp HHHHHHTTCHHHHHHHHHHTTCH-------------HHHHHHHHHHTCHHHHHHHHHHH------HHTTCHHHHHHHHHH
T ss_pred HHHHHHcCChHHHHHHHHHhCCH-------------HHHHHHHHHhCCHHHHHHHHHHH------HHCccHHHHHHHHHH
Confidence 34567789999999988775532 23456666788888888776541 112233467888888
Q ss_pred cCCHHHHHHHHhcCCCccccCCCCCChHHHHHHHcCCHHHHHHHHhc
Q 006802 204 QGHLEVLKELLGEFPNLVMTTDLSCSTALHTAAAQGHIDVVNFLLEI 250 (630)
Q Consensus 204 ~g~~eiv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~g~~e~v~~LL~~ 250 (630)
.|+.+-.-.++....... -+...|-.+|..++.+.+++.
T Consensus 102 lGdv~~~i~lL~~~~r~~--------eA~~~A~t~g~~~~a~~~~~~ 140 (177)
T 3mkq_B 102 NNSTKERSSIFAEGGSLP--------LAYAVAKANGDEAAASAFLEQ 140 (177)
T ss_dssp HTCHHHHHHHHHHTTCHH--------HHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHCCChH--------HHHHHHHHcCcHHHHHHHHHH
Confidence 998866555554433321 356777889999999988864
Done!