BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006803
(630 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P41111|EI2BD_RABIT Translation initiation factor eIF-2B subunit delta OS=Oryctolagus
cuniculus GN=EIF2B4 PE=2 SV=2
Length = 523
Score = 307 bits (786), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/390 (44%), Positives = 237/390 (60%), Gaps = 35/390 (8%)
Query: 235 KAERRETQEAQRAAKAAGKA-QGNKPVAAAGGAGPGNILRQPSQNRDDPAVGSTIAGSDR 293
+AERR QEA+RA K A K QG P P + AG
Sbjct: 100 RAERRAKQEAERALKQARKGEQGGPP----------------------PQASPSTAGEAP 137
Query: 294 RGGDRPPERERKKDVPPPRMQFDDQGRVNKSKKRAVFNQPEAKNRVELFRHLPQYEHGSQ 353
GG R E + D P + + V KS+++ V + + ++V LF HLPQY +
Sbjct: 138 AGGKRLTEHTQADD---PTLL---RRLVRKSERQQVPTRKDYGSKVSLFSHLPQYSRQNS 191
Query: 354 LTDLESKFLELDS--MHPAVYKVGVQYLAGDVTGGNARCIAMLRAFQEVINDYSTPPGKT 411
LT +++ + S +HPA+ ++G+QY G ++G NARCIA+LRA Q+VI DY+TPP +
Sbjct: 192 LT----QYMSIPSSVIHPAMVRLGLQYSQGLISGSNARCIALLRALQQVIQDYTTPPNEE 247
Query: 412 LVRDLTAKISSYVSFLIECRPLSMSMGNAIRFQKSRIAKLPLTLSETEAKAALCNDIDRF 471
L RDL K+ Y+ FL +CRPLS SM NAI+F I + T E EAKA L DR+
Sbjct: 248 LSRDLVNKLKPYICFLTQCRPLSASMYNAIKFLNKEITGVSSTKREEEAKAELQAAADRY 307
Query: 472 INEKIILADKVIVRHAATKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKH 531
+ EKI+LA + I+R A+ K+ +GDV+L YG S +V IL A G++FRVVVVDSRP+
Sbjct: 308 VQEKIVLAAQAILRFASKKISNGDVILVYGCSSLVSRILQEAWSEGRKFRVVVVDSRPRL 367
Query: 532 EGQALLRRLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVA 591
EG+ +LR L+ G+ +Y I A SY++ EV++V LGA ++L+NG+ SRVGTA +A+VA
Sbjct: 368 EGRHMLRFLVRAGVPASYLLIPAASYVLPEVSKVLLGAHALLANGSVMSRVGTAQLALVA 427
Query: 592 HAFRVPVLICCEAYKFHERVQLDSICSNEL 621
A VPVL+CCE YKF ERVQ D+ SNEL
Sbjct: 428 RAHNVPVLVCCETYKFCERVQTDAFVSNEL 457
>sp|Q9UI10|EI2BD_HUMAN Translation initiation factor eIF-2B subunit delta OS=Homo sapiens
GN=EIF2B4 PE=1 SV=2
Length = 523
Score = 305 bits (780), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 174/390 (44%), Positives = 234/390 (60%), Gaps = 36/390 (9%)
Query: 235 KAERRETQEAQRAAKAAGKA-QGNKPVAAAGGAGPGNILRQPSQNRDDPAVGSTIAGSDR 293
+AERR QEA+RA K A K QG P P + AG
Sbjct: 101 RAERRAKQEAERALKQARKGEQGGPP----------------------PKASPSTAGETP 138
Query: 294 RGGDRPPERERKKDVPPPRMQFDDQGRVNKSKKRAVFNQPEAKNRVELFRHLPQYEHGSQ 353
G R PE + D+ R+ V K +++ V + + ++V LF HLPQY +
Sbjct: 139 SGVKRLPEYPQVDDLLLRRL-------VKKPERQQVPTRKDYGSKVSLFSHLPQYSRQNS 191
Query: 354 LTDLESKFLELDS--MHPAVYKVGVQYLAGDVTGGNARCIAMLRAFQEVINDYSTPPGKT 411
LT +F+ + S +HPA+ ++G+QY G V+G NARCIA+LRA Q+VI DY+TPP +
Sbjct: 192 LT----QFMSIPSSVIHPAMVRLGLQYSQGLVSGSNARCIALLRALQQVIQDYTTPPNEE 247
Query: 412 LVRDLTAKISSYVSFLIECRPLSMSMGNAIRFQKSRIAKLPLTLSETEAKAALCNDIDRF 471
L RDL K+ Y+SFL +CRPLS SM NAI+F I + + E EAK+ L IDR+
Sbjct: 248 LSRDLVNKLKPYMSFLTQCRPLSASMHNAIKFLNKEITSVGSSKREEEAKSELRAAIDRY 307
Query: 472 INEKIILADKVIVRHAATKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKH 531
+ EKI+LA + I R A K+ +GDV+L YG S +V IL A G++FRVVVVDSRP
Sbjct: 308 VQEKIVLAAQAISRFAYQKISNGDVILVYGCSSLVSRILQEAWTEGRRFRVVVVDSRPWL 367
Query: 532 EGQALLRRLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVA 591
EG+ LR L+ G+ +Y I A SY++ EV++V LGA ++L+NG+ SRVGTA +A+VA
Sbjct: 368 EGRHTLRSLVHAGVPASYLLIPAASYVLPEVSKVLLGAHALLANGSVMSRVGTAQLALVA 427
Query: 592 HAFRVPVLICCEAYKFHERVQLDSICSNEL 621
A VPVL+CCE YKF ERVQ D+ SNEL
Sbjct: 428 RAHNVPVLVCCETYKFCERVQTDAFVSNEL 457
>sp|Q3T058|EI2BD_BOVIN Translation initiation factor eIF-2B subunit delta OS=Bos taurus
GN=EIF2B4 PE=2 SV=1
Length = 524
Score = 301 bits (771), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 175/394 (44%), Positives = 233/394 (59%), Gaps = 43/394 (10%)
Query: 235 KAERRETQEAQRAAKAAGKA-QGNKPVAAA---GGAGPGNILRQPSQNR-DDPAVGSTIA 289
+AERR QEA+RA K A K QG P A G P + R P ++ DDP + +
Sbjct: 101 RAERRAKQEAERAMKQARKGDQGGPPPQACPSTAGETPSGVKRLPEHSQVDDPTLLRRLV 160
Query: 290 GSDRRGGDRPPERERKKDVPPPRMQFDDQGRVNKSKKRAVFNQPEAKNRVELFRHLPQYE 349
+ PER++ P R + ++V LF HLPQY
Sbjct: 161 --------KKPERQQV----PTRKDYG--------------------SKVSLFSHLPQYS 188
Query: 350 HGSQLTDLESKFLELDS--MHPAVYKVGVQYLAGDVTGGNARCIAMLRAFQEVINDYSTP 407
+ LT +F+ + S +HPA+ ++G+QY G V+G NARCIA+LRA Q+VI DY+TP
Sbjct: 189 RQNSLT----QFMSIPSSVIHPAMVRLGLQYSQGLVSGSNARCIALLRALQQVIQDYTTP 244
Query: 408 PGKTLVRDLTAKISSYVSFLIECRPLSMSMGNAIRFQKSRIAKLPLTLSETEAKAALCND 467
P + L RDL K+ Y SFL +CRPLS SM NAI+ I + + E EAK+ L
Sbjct: 245 PSEELSRDLVNKLKPYFSFLTQCRPLSASMYNAIKLLNKEITGVSGSKREEEAKSELRAA 304
Query: 468 IDRFINEKIILADKVIVRHAATKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDS 527
IDR+I EKI+LA + I R A K+ +GDV+L YG S +V IL A G+QFRVVVVDS
Sbjct: 305 IDRYIKEKIVLAAQAISRFAYKKISNGDVILVYGCSSLVSHILQEAWAKGRQFRVVVVDS 364
Query: 528 RPKHEGQALLRRLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACV 587
RP+ E + LR L+ G+ +Y I A SY++ EV++V LGA ++L+NG+ SRVGTA +
Sbjct: 365 RPRLEAKHTLRSLVRAGVPASYLLIPAASYVLPEVSKVLLGAHALLANGSVMSRVGTAQL 424
Query: 588 AMVAHAFRVPVLICCEAYKFHERVQLDSICSNEL 621
A+VA A VPVL+CCE YKF ERVQ D+ SNEL
Sbjct: 425 ALVARAHNVPVLVCCETYKFCERVQTDAFVSNEL 458
>sp|Q61749|EI2BD_MOUSE Translation initiation factor eIF-2B subunit delta OS=Mus musculus
GN=Eif2b4 PE=2 SV=2
Length = 524
Score = 301 bits (770), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 169/390 (43%), Positives = 234/390 (60%), Gaps = 35/390 (8%)
Query: 235 KAERRETQEAQRAAKAAGKA-QGNKPVAAAGGAGPGNILRQPSQNRDDPAVGSTIAGSDR 293
+AERR QEA+RA K A K QG P P + AG
Sbjct: 101 RAERRAKQEAERALKQARKGEQGGVP----------------------PQACPSTAGETT 138
Query: 294 RGGDRPPERERKKDVPPPRMQFDDQGRVNKSKKRAVFNQPEAKNRVELFRHLPQYEHGSQ 353
G R PE D P + + + K ++ V + + ++V LF HLPQY S
Sbjct: 139 SGVKRVPEHTPADD---PTLL---RRLLRKPDRQQVPTRKDYGSKVSLFSHLPQYSRQSS 192
Query: 354 LTDLESKFLELDS--MHPAVYKVGVQYLAGDVTGGNARCIAMLRAFQEVINDYSTPPGKT 411
LT +++ + S +HPA+ ++G+QY G ++G NARCIA+L A Q+VI DY+TPP +
Sbjct: 193 LT----QYMSIPSSVIHPAMVRLGLQYSQGLISGSNARCIALLHALQQVIQDYTTPPSEE 248
Query: 412 LVRDLTAKISSYVSFLIECRPLSMSMGNAIRFQKSRIAKLPLTLSETEAKAALCNDIDRF 471
L RDL K+ Y+SFL +CRP+S SM NAI+F + + + E EAK+ L +DR+
Sbjct: 249 LSRDLVNKLKPYISFLTQCRPMSASMCNAIKFLTKEVTGMSSSKREEEAKSELREALDRY 308
Query: 472 INEKIILADKVIVRHAATKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKH 531
+ EKI+LA + I R A+TK+ DGDV+L YG S +V IL A G++FRVVVVDSRP+
Sbjct: 309 VQEKIVLAAQAISRFASTKISDGDVILVYGCSSLVSRILQEARVEGRRFRVVVVDSRPRL 368
Query: 532 EGQALLRRLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVA 591
EG+ +L L+ G+ +Y I A SY++ EV++V LGA ++L+NG+ SRVGTA +A+VA
Sbjct: 369 EGRHMLHSLVRAGVPTSYLLIPAASYVLPEVSKVLLGAHALLANGSVMSRVGTAQLALVA 428
Query: 592 HAFRVPVLICCEAYKFHERVQLDSICSNEL 621
A VPVL+CCE YKF ERVQ D+ SNEL
Sbjct: 429 RAHNVPVLVCCETYKFCERVQTDAFVSNEL 458
>sp|Q63186|EI2BD_RAT Translation initiation factor eIF-2B subunit delta OS=Rattus
norvegicus GN=Eif2b4 PE=2 SV=1
Length = 524
Score = 301 bits (770), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/389 (43%), Positives = 230/389 (59%), Gaps = 33/389 (8%)
Query: 235 KAERRETQEAQRAAKAAGKAQGNKPVAAAGGAGPGNILRQPSQNRDDPAVGSTIAGSDRR 294
+AERR QEA+RA K A K + P P + AG
Sbjct: 101 RAERRAKQEAERALKQARKGEQGGP---------------------SPQACPSTAGEATS 139
Query: 295 GGDRPPERERKKDVPPPRMQFDDQGRVNKSKKRAVFNQPEAKNRVELFRHLPQYEHGSQL 354
G R PE + D R K ++ V + + ++V LF HLPQY S L
Sbjct: 140 GVKRVPEHTQADDPTLLRRLL------RKPDRQQVPTRKDYGSKVSLFSHLPQYSRQSSL 193
Query: 355 TDLESKFLELDS--MHPAVYKVGVQYLAGDVTGGNARCIAMLRAFQEVINDYSTPPGKTL 412
T +++ + S +HPA+ ++G+QY G V+G NARCIA+L A Q+VI DY+TPP + L
Sbjct: 194 T----QYMSIPSSVIHPAMVRLGLQYSQGLVSGSNARCIALLHALQQVIQDYTTPPNEEL 249
Query: 413 VRDLTAKISSYVSFLIECRPLSMSMGNAIRFQKSRIAKLPLTLSETEAKAALCNDIDRFI 472
RDL K+ Y+SFL +CRP+S SM NAI+F + + + E EAK+ L IDR++
Sbjct: 250 SRDLVNKLKPYISFLTQCRPMSASMCNAIKFFNKEVTGMSSSKREEEAKSELKEAIDRYV 309
Query: 473 NEKIILADKVIVRHAATKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKHE 532
EKI+LA + I R A+ K+ DGDV+L YG S +V IL A G++FRVVVVDSRP+ E
Sbjct: 310 QEKIVLASQAISRFASKKISDGDVILVYGCSSLVSRILQEAWVEGRRFRVVVVDSRPRLE 369
Query: 533 GQALLRRLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVAH 592
G+ +L L+ G+ +Y I A SY++ EV++V LGA ++L+NG+ SRVGTA +A+VA
Sbjct: 370 GRHMLHCLVRAGVPTSYLLIPAASYVLPEVSKVLLGAHALLANGSVMSRVGTAQLALVAR 429
Query: 593 AFRVPVLICCEAYKFHERVQLDSICSNEL 621
A VPVL+CCE YKF ERVQ D+ SNEL
Sbjct: 430 AHNVPVLVCCETYKFCERVQTDAFVSNEL 458
>sp|Q09924|EI2BD_SCHPO Probable translation initiation factor eIF-2B subunit delta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif224 PE=1 SV=1
Length = 467
Score = 278 bits (710), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 128/256 (50%), Positives = 180/256 (70%)
Query: 367 MHPAVYKVGVQYLAGDVTGGNARCIAMLRAFQEVINDYSTPPGKTLVRDLTAKISSYVSF 426
+HPAV ++G++ + G N RCI +L+ F+ VI DY TP G TL R LT I+S +++
Sbjct: 141 IHPAVIRLGLKLANYKIFGSNQRCIDLLKTFKIVIQDYQTPYGTTLSRHLTTHINSQIAY 200
Query: 427 LIECRPLSMSMGNAIRFQKSRIAKLPLTLSETEAKAALCNDIDRFINEKIILADKVIVRH 486
L+ RPLS+SMGNAIRF K I+ L + L++ E K L ID +I ++II+A +VIV+
Sbjct: 201 LVSTRPLSISMGNAIRFLKLEISVLDIDLTDDEGKELLLEKIDSYIRDRIIIAGQVIVQA 260
Query: 487 AATKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKHEGQALLRRLLAKGLS 546
A K++DGDV+LTY S V +L++A +GK+FRVVVVDSRP+ EG+ L+ L G+
Sbjct: 261 ATEKIQDGDVILTYLHSSTVNDVLIHAKNVGKKFRVVVVDSRPEFEGRVCLKLLTEHGIE 320
Query: 547 CTYTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVAHAFRVPVLICCEAYK 606
CTY I+A+SYIM EVT++FLG ++LSNG YSR GT+ ++++ H VPV+ CCE+YK
Sbjct: 321 CTYVMISALSYIMQEVTKIFLGGHAMLSNGALYSRAGTSLISLLGHESNVPVIACCESYK 380
Query: 607 FHERVQLDSICSNELG 622
F ER+QLDS+ NEL
Sbjct: 381 FTERIQLDSLVYNELA 396
>sp|Q54FM3|EI2BD_DICDI Translation initiation factor eIF-2B subunit delta OS=Dictyostelium
discoideum GN=eif2b4 PE=3 SV=1
Length = 619
Score = 274 bits (701), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/325 (44%), Positives = 205/325 (63%), Gaps = 8/325 (2%)
Query: 302 RERKKDVPPPRMQFDDQGRVNKSKKRAVFNQPEAKNRVELFRHLPQYEH----GSQLTDL 357
+E KD QFDD + K K+ + E+ V+LF HLPQY G ++
Sbjct: 226 KEVAKDGQHGVKQFDDPKQRGKITKKKIIKVGESSRSVQLFNHLPQYNSEFSMGVSVSTD 285
Query: 358 ESKFLELDSMHPAVYKVGVQYLAGDVTGGNARCIAMLRAFQEVINDYSTPPGKTLVRDLT 417
E E +HP + +G++Y + G NAR IAM+ AF ++ DY P K R+L
Sbjct: 286 EPN--EKYPIHPDIISLGLKYAEFKIAGSNARAIAMMTAFIQIFKDYVAAPDKVYSRELD 343
Query: 418 AKISSYVSFLIECRPLSMSMGNAIRFQKSRIAKLPLTLSETEAKAALCNDIDRFINEKII 477
+ + + FL++CRP+S+SMGN+I + K +++ L +S A+ L I+ FI E+I
Sbjct: 344 SLLKRNIQFLVDCRPISISMGNSINYVKHKLS-LTNNMSHEGARDYLIKSINEFI-ERIQ 401
Query: 478 LADKVIVRHAATKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKHEGQALL 537
+AD IV+H +K+ DGDV+LTY SS VVE+I+ A + K+FR+++VDSRPKHEG+ LL
Sbjct: 402 MADNAIVKHGCSKINDGDVILTYASSHVVELIIQQAIQDKKKFRLIIVDSRPKHEGRELL 461
Query: 538 RRLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVAHAFRVP 597
RL+ G+ TY ++AVSYIM EVT+VF+GA SVLSNG SR GT+ VA +A + VP
Sbjct: 462 HRLVLHGVKITYIMLHAVSYIMKEVTKVFVGAYSVLSNGNLISRSGTSLVASMAKFYNVP 521
Query: 598 VLICCEAYKFHERVQLDSICSNELG 622
++CCE YKF ERVQLDSIC N++G
Sbjct: 522 FIVCCETYKFTERVQLDSICFNQIG 546
>sp|P12754|EI2BD_YEAST Translation initiation factor eIF-2B subunit delta OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=GCD2 PE=1
SV=1
Length = 651
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 172/277 (62%), Gaps = 2/277 (0%)
Query: 348 YEHGSQLTDLESKFLELDSMHPAVYKVGVQYLAGDVTGGNARCIAMLRAFQEVINDYSTP 407
+++ S ++ ++ L D +HP++ + + G RCIAML FQ VI DY TP
Sbjct: 251 FDNSSLISSVKELLLNKDLIHPSILLLTSHLAHYKIVGSIPRCIAMLEVFQIVIKDYQTP 310
Query: 408 PGKTLVRDLTAKISSYVSFLIECRPLSMSMGNAIRFQKSRIAKLPLTLSETEAKAALCND 467
G TL R+LT+ +S + L + RPLS++MGNAIR+ K I+ + + + AK LC
Sbjct: 311 KGTTLSRNLTSYLSHQIDLLKKARPLSVTMGNAIRWLKQEISLIDPSTPDKAAKKDLCEK 370
Query: 468 IDRFINEKIILADKVIVRHAATKVRDGDVLLTYGSSCVVEMILLY-AHELGKQFRVVVVD 526
I +F EKI LAD++I+ +A+T++ + ++TYGSS V+ +LL+ A L K +V+VVD
Sbjct: 371 IGQFAKEKIELADQLIIDNASTQIEESTTIVTYGSSKVLTELLLHNAISLKKNIKVIVVD 430
Query: 527 SRPKHEGQALLRRLLAKGLSCTYTHINAVSYIMH-EVTRVFLGASSVLSNGTTYSRVGTA 585
SRP EG+ + L G++ Y I ++ I + +V VFLGA S+LSNG YSR GTA
Sbjct: 431 SRPLFEGRKMAETLRNAGVNVMYALITSLDTIFNMDVDYVFLGAHSILSNGFLYSRAGTA 490
Query: 586 CVAMVAHAFRVPVLICCEAYKFHERVQLDSICSNELG 622
+AM A +PVL+CCE+ KF +RVQLDS+ NEL
Sbjct: 491 MLAMSAKRRNIPVLVCCESLKFSQRVQLDSVTFNELA 527
>sp|O57947|EI2B2_PYRHO Putative translation initiation factor eIF-2B subunit 2
OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428
/ JCM 9974 / NBRC 100139 / OT-3) GN=PH0208 PE=3 SV=1
Length = 324
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 8/200 (4%)
Query: 426 FLIECRPLSMSMGNAIRFQKSRIAKLPLTLSETEA-KAALCNDIDRFINEKIILADKVIV 484
L RP ++S+ NA+R+ R+ L ++ E + N FI ++K I
Sbjct: 60 ILYNTRPTAVSLPNALRYVMHRVKAAYLGGADLETLRFTAINSAKEFIYN----SEKAIE 115
Query: 485 RHA---ATKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKHEGQALLRRLL 541
R A ++ DGD+++T+ S ++ A E GK +V+V ++RPK +G+ + L
Sbjct: 116 RIGEIGAKRIEDGDIIMTHCHSKAAISVMKKAFEQGKNIKVIVTETRPKWQGKITAKELA 175
Query: 542 AKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVAHAFRVPVLIC 601
+ G+ Y +A + M +V +GA S+ +NG +++GT+ +A+ A RV V+I
Sbjct: 176 SYGIPVIYIVDSAARHYMKMTDKVVMGADSITANGAVINKIGTSLIALTAKEHRVWVMIA 235
Query: 602 CEAYKFHERVQLDSICSNEL 621
E YKFH L + E+
Sbjct: 236 AETYKFHPATMLGQLVEIEM 255
>sp|Q9V281|EI2B2_PYRAB Putative translation initiation factor eIF-2B subunit 2
OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=aIF-2BII
PE=3 SV=1
Length = 324
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 109/212 (51%), Gaps = 10/212 (4%)
Query: 415 DLTAKISSYVSFLIECRPLSMSMGNAIRF--QKSRIAKLPLTLSETEAKAALCNDIDRFI 472
+L ++ L + RP ++S+ NA+R+ +++IA ET + + N FI
Sbjct: 49 ELWTELKEAAKILYKTRPTAVSLPNALRYVMHRAKIAYSSGADLET-LRFTVINSAKEFI 107
Query: 473 NEKIILADKVIVRHA---ATKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRP 529
+ ++K I R A ++ DGDV++T+ S ++ A + GK +V+V ++RP
Sbjct: 108 HN----SEKAIERIGEIGAKRIEDGDVIMTHCHSKAAISVMKTAFDQGKDIKVIVTETRP 163
Query: 530 KHEGQALLRRLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAM 589
+ +G+ + L + G+ Y +A + M +V +GA S+ +NG +++GT+ +A+
Sbjct: 164 RWQGKITAKELASYGIPVIYVVDSAARHYMKMTDKVVMGADSITANGAVINKIGTSLIAL 223
Query: 590 VAHAFRVPVLICCEAYKFHERVQLDSICSNEL 621
A RV V+I E YKFH L + E+
Sbjct: 224 TAKEHRVWVMIAAETYKFHPETMLGQLVEIEM 255
>sp|Q57586|EI2B2_METJA Putative translation initiation factor eIF-2B subunit 2
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0122
PE=3 SV=1
Length = 308
Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 100/184 (54%), Gaps = 8/184 (4%)
Query: 425 SFLIECRPLSMSMGNAIRFQKSRIAKLPLTLSETEAKAALCNDIDRFINEKIILADKVIV 484
+ LI RP ++S+ N +++ + L+E K + D FIN + A + I
Sbjct: 61 NILISARPTAVSLPNVVKY-------VLKGLNEENPKERVIERADEFINSSL-KAIENIG 112
Query: 485 RHAATKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKHEGQALLRRLLAKG 544
+ A +++DGD +LT+ +S ++ A++ GK +V ++RP+++G + L G
Sbjct: 113 KFGANRIKDGDTILTHCNSEAAISVIKTAYDEGKDIKVFCTETRPRNQGYLTAKTLYDYG 172
Query: 545 LSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVAHAFRVPVLICCEA 604
+ T +AV Y + E+ V +GA ++ +NG +++GT+ +A++A+ RVP L E
Sbjct: 173 IDVTLIVDSAVRYFIKEIDIVVVGADAITANGCLVNKIGTSQIALIANESRVPFLTAAET 232
Query: 605 YKFH 608
YKFH
Sbjct: 233 YKFH 236
>sp|Q8U4G6|EI2B2_PYRFU Putative translation initiation factor eIF-2B subunit 2
OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 /
JCM 8422 / Vc1) GN=PF0122 PE=3 SV=2
Length = 324
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 107/212 (50%), Gaps = 10/212 (4%)
Query: 415 DLTAKISSYVSFLIECRPLSMSMGNAIRFQKSRIAKLPLTL-SETEA-KAALCNDIDRFI 472
+L ++ L RP ++S+ NA+R+ R K+ T ++ E+ + + N FI
Sbjct: 49 ELWKELKEASKILYNTRPTAVSLPNALRYVMYR-GKIAYTSNADLESLRYTIINAAKEFI 107
Query: 473 NEKIILADKVIVRHA---ATKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRP 529
++K I R A ++ DGDV++T+ S ++ A + GK +V+V ++RP
Sbjct: 108 YN----SEKAIERIGEIGAKRIEDGDVIMTHCHSKAAISVMKTAFDQGKDIKVIVTETRP 163
Query: 530 KHEGQALLRRLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAM 589
+ +G+ + L + G+ Y A + M +V +GA S+ +NG +++GTA +A+
Sbjct: 164 RWQGKITAKELASYGIPVIYIVDGAARHYMKMTDKVVMGADSITANGAVINQIGTALIAL 223
Query: 590 VAHAFRVPVLICCEAYKFHERVQLDSICSNEL 621
A RV V+I E YKFH L + E+
Sbjct: 224 TAKEHRVWVMIAAETYKFHPETMLGQLVEIEM 255
>sp|O28242|EI2B2_ARCFU Putative translation initiation factor eIF-2B subunit 2
OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 /
DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_2037 PE=3 SV=1
Length = 313
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 96/181 (53%), Gaps = 6/181 (3%)
Query: 427 LIECRPLSMSMGNAIRFQKSRIAKLPLTLSETEAKAALCNDIDRFINEKIILADKVIVRH 486
L+ RP ++S+ NAI + + S E + ++ FIN + A + I
Sbjct: 53 LLNTRPTAVSLYNAINYVMRYSGE-----SVEEKRQSVIRRAREFIN-WVETAQRKIGEI 106
Query: 487 AATKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKHEGQALLRRLLAKGLS 546
+++DG ++T+ +S ++ AHE GK+ V+ +SRP+ +G +++L G+
Sbjct: 107 GEKRIKDGYTVMTHCNSSAALSVIKKAHENGKRVEVIATESRPRWQGHLTVKQLREAGIE 166
Query: 547 CTYTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVAHAFRVPVLICCEAYK 606
T +AV Y ++EV V +GA ++ +NG +++GT+ +A+ A RVP ++ E YK
Sbjct: 167 VTLIVDSAVRYFINEVDCVVVGADTITANGALINKIGTSQIALAAKEARVPFMVAAETYK 226
Query: 607 F 607
F
Sbjct: 227 F 227
>sp|Q54I81|EI2BA_DICDI Translation initiation factor eIF-2B subunit alpha OS=Dictyostelium
discoideum GN=eif2b1 PE=3 SV=1
Length = 321
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 478 LADKVIVRHAATKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKHEGQALL 537
LADK I RDG +L +G S VV +LL+A GK+F V+V +SRP G
Sbjct: 123 LADKFI--------RDGVTILVHGFSRVVLGLLLHAAFQGKRFSVIVTESRPDSSGYKTA 174
Query: 538 RRLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVAHAFRVP 597
RL A + VS I+ +V V +GA +++ NG +++GT +++VA AF+ P
Sbjct: 175 ARLQAANIPVKLIMDGGVSRIIDKVDYVLVGAEAIVENGGIVNKIGTYQISIVAKAFKKP 234
Query: 598 VLICCEAYKF 607
+ E++KF
Sbjct: 235 FYVAAESFKF 244
>sp|D4GV73|EI2B2_HALVD Putative translation initiation factor eIF-2B subunit 2
OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 /
JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)
GN=aIF-2BII PE=1 SV=1
Length = 323
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 95/194 (48%), Gaps = 11/194 (5%)
Query: 418 AKISSYVSFLIECRPLSMSMGNAIRF---QKSRIAKLPLTLSETEAKAALCNDIDRFINE 474
A++ + L E RP ++S+ NA+R+ S L S ++ C ++R
Sbjct: 52 AELRATARTLHETRPTAVSLPNALRYVLRDMSSTTVEGLRQSVVDSADEFCARLER---- 107
Query: 475 KIILADKVIVRHAATKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKHEGQ 534
A + + A ++RDGD ++T+ S + A E GK VV ++RP+++G
Sbjct: 108 ----AQADLGQVGANRLRDGDTIMTHCHSTDALACVEAAVEQGKHIEAVVKETRPRNQGH 163
Query: 535 ALLRRLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVAHAF 594
+RL G+ T +A +++V V +GA +V ++G+ +++GT+ +A+ A
Sbjct: 164 ITAKRLHELGVPVTLIVDSAARRYLNDVDHVLVGADAVAADGSVINKIGTSGLAVNARER 223
Query: 595 RVPVLICCEAYKFH 608
P+++ + K H
Sbjct: 224 GTPIMVAAQTLKLH 237
>sp|P14741|EI2BA_YEAST Translation initiation factor eIF-2B subunit alpha OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=GCN3 PE=1
SV=1
Length = 305
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 491 VRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKHEGQALLRRLLAKGLSCTYT 550
+ D D++L +G S V +L +A +FR VV +SRP +G L L KG+ T
Sbjct: 120 IADDDIILVHGYSRAVFSLLNHAANKFIRFRCVVTESRPSKQGNQLYTLLEQKGIPVTLI 179
Query: 551 HINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVAHAFRVPVLICCEAYKFHER 610
+AV ++ +V +VF+GA V +G + VGT V ++AH R P + E++KF
Sbjct: 180 VDSAVGAVIDKVDKVFVGAEGVAESGGIINLVGTYSVGVLAHNARKPFYVVTESHKF--- 236
Query: 611 VQLDSICSNELGM 623
V++ + S++L M
Sbjct: 237 VRMFPLSSDDLPM 249
>sp|Q8U3J1|EI2BL_PYRFU Putative translation initiation factor eIF-2B subunit 2-like
OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 /
JCM 8422 / Vc1) GN=PF0475 PE=3 SV=1
Length = 276
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%)
Query: 479 ADKVIVRHAATKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKHEGQALLR 538
A K I A + GDV++T+ S V IL A GKQF+V++ +S P +EG L +
Sbjct: 95 AKKEIASIGAQLIDSGDVIITHSYSSAVFEILKTAKRRGKQFKVILTESAPDYEGLYLAK 154
Query: 539 RLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVAHAFRVPV 598
L + + + + T +GA +V +G ++ GT +A+ + VP
Sbjct: 155 ALQDESIEVEIITDAQLGLFAKDATLAIVGADTVTKDGYVVNKAGTYLLAISCYESEVPF 214
Query: 599 LICCEAYKFHERV 611
+ E YKFH+++
Sbjct: 215 YVAAETYKFHQKI 227
>sp|O58185|EI2BL_PYRHO Putative translation initiation factor eIF-2B subunit 2-like
OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428
/ JCM 9974 / NBRC 100139 / OT-3) GN=PH0440 PE=1 SV=1
Length = 276
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%)
Query: 488 ATKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKHEGQALLRRLLAKGLSC 547
A + DGDV++T+ S V I+ A E K+F+V++ +S P +EG L R L G+
Sbjct: 104 AQLIDDGDVIITHSFSSTVLEIIRTAKERKKRFKVILTESSPDYEGLHLARELEFSGIEF 163
Query: 548 TYTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVAHAFRVPVLICCEAYKF 607
+ E + +GA + +G ++ GT +A+ H +P + E YKF
Sbjct: 164 EVITDAQMGLFCREASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYVAAETYKF 223
Query: 608 H 608
H
Sbjct: 224 H 224
>sp|P34604|EI2BA_CAEEL Probable translation initiation factor eIF-2B subunit alpha
OS=Caenorhabditis elegans GN=ZK1098.4 PE=1 SV=1
Length = 305
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%)
Query: 497 LLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKHEGQALLRRLLAKGLSCTYTHINAVS 556
+LT+ S VV +L AH+ G V V +S+P G+ + L G+ T + V
Sbjct: 129 ILTHSYSKVVLETILDAHKSGYHLHVWVTESQPDASGKLVFEELKKNGVPTTLVLDSCVG 188
Query: 557 YIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVAHAFRVPVLICCEAYKF 607
Y+M + V +GA V+ G +++GT V ++A + VPV +C E KF
Sbjct: 189 YVMERIQAVLVGAEGVMETGGIINKIGTVNVCIIAKSRHVPVYVCAETIKF 239
>sp|Q9UYB6|EI2BL_PYRAB Putative translation initiation factor eIF-2B subunit 2-like
OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=PYRAB15920
PE=3 SV=1
Length = 276
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 19/208 (9%)
Query: 413 VRDLTAKISSYVSFLIECRPLSMSMGNAIRFQKSRIAKLPLTLSETEAKAALCNDIDRFI 472
+R+L ++I IE P S+ N RF +P+T + K + R
Sbjct: 48 IRELRSRI-------IEVNPSMASLYNLARF-------MPITNNRELVKMRALEFLRRMD 93
Query: 473 NEKIILADKVIVRHAATKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKHE 532
K LA A + DGDV++T+ S V I A + K F+V++ +S P +E
Sbjct: 94 EAKRELASI-----GAQLIDDGDVIITHSFSSSVLEIFKVAKDRRKSFKVIITESSPDYE 148
Query: 533 GQALLRRLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVAH 592
G L L G+ + + + T +GA V +G ++ GT +A+ H
Sbjct: 149 GLHLANELENLGIEFEVITDSQMGLFCRKATISMVGADMVTRDGFVVNKAGTYLLALACH 208
Query: 593 AFRVPVLICCEAYKFHERVQLDSICSNE 620
VP + E YKFH V+ + + +E
Sbjct: 209 ESDVPFYVAAETYKFHPTVKSNEVVLHE 236
>sp|Q5RAR0|EI2BA_PONAB Translation initiation factor eIF-2B subunit alpha OS=Pongo abelii
GN=EIF2B1 PE=2 SV=2
Length = 305
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 62/119 (52%)
Query: 489 TKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKHEGQALLRRLLAKGLSCT 548
T ++DG +LT+ S VV +L A K+F V V +S+P G+ + + L + T
Sbjct: 117 TFIKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVT 176
Query: 549 YTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVAHAFRVPVLICCEAYKF 607
AV YIM + V +GA V+ NG +++GT +A+ A A P + E++KF
Sbjct: 177 VVLDAAVGYIMEKADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVVAESFKF 235
>sp|Q14232|EI2BA_HUMAN Translation initiation factor eIF-2B subunit alpha OS=Homo sapiens
GN=EIF2B1 PE=1 SV=1
Length = 305
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 62/119 (52%)
Query: 489 TKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKHEGQALLRRLLAKGLSCT 548
T ++DG +LT+ S VV +L A K+F V V +S+P G+ + + L + T
Sbjct: 117 TFIKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVT 176
Query: 549 YTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVAHAFRVPVLICCEAYKF 607
AV YIM + V +GA V+ NG +++GT +A+ A A P + E++KF
Sbjct: 177 VVLDAAVGYIMEKADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVVAESFKF 235
>sp|Q0IIF2|EI2BA_BOVIN Translation initiation factor eIF-2B subunit alpha OS=Bos taurus
GN=EIF2B1 PE=2 SV=1
Length = 305
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%)
Query: 489 TKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKHEGQALLRRLLAKGLSCT 548
T ++DG +LT+ S VV +L A K+F V + +S+P G+ + + L + T
Sbjct: 117 TFIKDGARILTHAYSRVVLRVLEAAVAAKKRFSVYITESQPDLSGKKMAKALCHLNVPVT 176
Query: 549 YTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVAHAFRVPVLICCEAYKF 607
AV YIM +V V +GA V+ NG +++GT +A+ A A P + E++KF
Sbjct: 177 VVLDAAVGYIMEKVDLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVVAESFKF 235
>sp|Q54EY2|EI2BB_DICDI Translation initiation factor eIF-2B subunit beta OS=Dictyostelium
discoideum GN=eif2b2 PE=3 SV=1
Length = 388
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 2/162 (1%)
Query: 461 KAALCNDIDRFINEKIILADKVIVRHAATKVRDGDVLLTYGSSCVVEMILLYAHELGKQF 520
KAA+ + I+ I+E L V A + + ++T G S VE L A + F
Sbjct: 165 KAAIMDSINELIDELEGLHRNV-AEQAIEHIHSNETIMTLGCSRTVEEFLKEAAR-KRSF 222
Query: 521 RVVVVDSRPKHEGQALLRRLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTTYS 580
+V+VV++ P EGQ L + T +AV +M V +V +G +V++NG +
Sbjct: 223 KVIVVETAPSLEGQKTAISLSKASIDTTLITDSAVFAMMSRVNKVIIGTHAVMANGGLIA 282
Query: 581 RVGTACVAMVAHAFRVPVLICCEAYKFHERVQLDSICSNELG 622
GT +A+ A VP+++C YK D N G
Sbjct: 283 TSGTHTLAVAAKYHSVPIVVCTGLYKLCPLYAYDQDTFNNFG 324
>sp|Q64270|EI2BA_RAT Translation initiation factor eIF-2B subunit alpha OS=Rattus
norvegicus GN=Eif2b1 PE=2 SV=1
Length = 305
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%)
Query: 491 VRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKHEGQALLRRLLAKGLSCTYT 550
++DG +LT+ S VV +L A K+F V + +S+P G+ + + L + T
Sbjct: 119 IKDGARILTHAYSRVVLRVLEEAVAAKKRFSVYITESQPDLSGKKMAKALCHLNVPVTVV 178
Query: 551 HINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVAHAFRVPVLICCEAYKF 607
AV YIM +V V +GA V+ NG +++GT +A+ A A P + E++KF
Sbjct: 179 LDAAVGYIMEKVDLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVVAESFKF 235
>sp|Q4R4V8|EI2BA_MACFA Translation initiation factor eIF-2B subunit alpha OS=Macaca
fascicularis GN=EIF2B1 PE=2 SV=1
Length = 305
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%)
Query: 489 TKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKHEGQALLRRLLAKGLSCT 548
T ++DG +LT+ S VV +L A K+F V V +S+P G+ + + L + T
Sbjct: 117 TFIKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVT 176
Query: 549 YTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVAHAFRVPVLICCEAYKF 607
AV YIM + V +GA V+ NG +++GT +A+ A A P E++KF
Sbjct: 177 VVLDAAVGYIMEKADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYAVAESFKF 235
>sp|Q99LC8|EI2BA_MOUSE Translation initiation factor eIF-2B subunit alpha OS=Mus musculus
GN=Eif2b1 PE=2 SV=1
Length = 305
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%)
Query: 475 KIILADKVIVRHAATKVRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKHEGQ 534
+I L+ I T ++DG +LT+ S VV +L A K+F V + +S+P G+
Sbjct: 103 RISLSRNKIANLCHTFIKDGARILTHAYSRVVLRVLEEAVAAKKRFSVYITESQPDLSGK 162
Query: 535 ALLRRLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVAHAF 594
+ + L + T AV YIM + V +GA V+ NG +++GT +A+ A A
Sbjct: 163 KMAKALSHLNVPVTVVLDAAVGYIMEKADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQ 222
Query: 595 RVPVLICCEAYKF 607
P + E++KF
Sbjct: 223 NKPFYVVAESFKF 235
>sp|B8J4S7|MTNA_DESDA Methylthioribose-1-phosphate isomerase OS=Desulfovibrio
desulfuricans (strain ATCC 27774 / DSM 6949) GN=mtnA
PE=3 SV=1
Length = 378
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
Query: 481 KVIVRHAATKVRDGDVLLTYGSSCVVEM--------ILLYAHELGKQFRVVVVDSRPKHE 532
K + RH A + DGD +LT+ ++ + ++ A E GK+ V+ ++RP +
Sbjct: 137 KTLGRHGAACIEDGDCVLTHCNAGALATAGYGTALGVIRAAVEAGKKVSVIADETRPFLQ 196
Query: 533 GQALLRRLLAK-GLSCTYTHINAVSYIMHE--VTRVFLGASSVLSNGTTYSRVGTACVAM 589
G L L + G+ T NA + +M V RV +GA + +NG T +++GT VA+
Sbjct: 197 GARLTAWELERDGIPVTVACDNACALLMSRGLVQRVVVGADRIAANGDTANKIGTYGVAL 256
Query: 590 VAHAFRVPVLI 600
+A F +P +
Sbjct: 257 LARHFHIPFYV 267
>sp|Q57896|MTNA_METJA Putative methylthioribose-1-phosphate isomerase
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0454
PE=3 SV=1
Length = 329
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 17/134 (12%)
Query: 491 VRDGDVLLT-----------YGSSCVVEMILLYAHELGKQFRVVVVDSRPKHEGQALLR- 538
+ DGD +LT YG++ V + +A GK+ RV+ ++RP+ +G L
Sbjct: 133 IEDGDTILTHCNAGALATSAYGTALSV---IRFAFYNGKKIRVIADETRPRLQGAKLTAF 189
Query: 539 RLLAKGLSCTYTHINAVSYIMH--EVTRVFLGASSVLSNGTTYSRVGTACVAMVAHAFRV 596
L +G+ N ++M E+ ++ +GA +L++GT Y+++GT +A++A R+
Sbjct: 190 ELNYEGIPVKVITDNTAGFLMQKGEIDKIIVGADRILADGTVYNKIGTYSLAVLAKYHRI 249
Query: 597 PVLICCEAYKFHER 610
P + F R
Sbjct: 250 PFYVAAPLSTFDLR 263
>sp|P49770|EI2BB_HUMAN Translation initiation factor eIF-2B subunit beta OS=Homo sapiens
GN=EIF2B2 PE=1 SV=3
Length = 351
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 4/149 (2%)
Query: 462 AALCNDIDRFINEKIILADKV---IVRHAATKVRDGDVLLTYGSSCVVEMILLYAHELGK 518
A L ++I INE ++ + I A + +V++T G S VE L A +
Sbjct: 127 AQLQSNIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAAR-KR 185
Query: 519 QFRVVVVDSRPKHEGQALLRRLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTT 578
+F V+V + P +G + L G+ T A+ +M V +V +G ++L+NG
Sbjct: 186 KFHVIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGAL 245
Query: 579 YSRVGTACVAMVAHAFRVPVLICCEAYKF 607
+ GT +A+ A P+++C +K
Sbjct: 246 RAVTGTHTLALAAKHHSTPLIVCAPMFKL 274
>sp|Q9UT76|EI2BB_SCHPO Probable translation initiation factor eIF-2B subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif222 PE=1 SV=1
Length = 393
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Query: 459 EAKAALCNDIDRFINEKIILADKV---IVRHAATKVRDGDVLLTYGSSCVVEMILLYAHE 515
+ +A + + I I+E DK+ I + + +++LT G S VE L +A +
Sbjct: 168 DMRAVIISGIQDVIDE----LDKINTDIEVQSMDHLHSNEIILTQGCSKTVEAFLRFAAK 223
Query: 516 LGKQFRVVVVDSRPKHE--GQALLRRLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVL 573
++F V+V + P ++ A+ +RL G+ T + IM V +V LG ++L
Sbjct: 224 -KRKFSVIVAEGFPNNQKGSHAMAKRLAQAGIDTTVISDATIFAIMSRVNKVILGTHAIL 282
Query: 574 SNGTTYSRVGTACVAMVAHAFRVPVLICCEAYKF 607
NG + G VA A PV++C YK
Sbjct: 283 GNGGLVTYSGAQLVAQAARHHATPVVVCSGIYKL 316
>sp|Q5E9B4|EI2BB_BOVIN Translation initiation factor eIF-2B subunit beta OS=Bos taurus
GN=EIF2B2 PE=2 SV=1
Length = 351
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 4/149 (2%)
Query: 462 AALCNDIDRFINEKIILADKV---IVRHAATKVRDGDVLLTYGSSCVVEMILLYAHELGK 518
A L ++I INE ++ + I A + +V++T G S VE L A +
Sbjct: 127 AQLQSNIIEAINELLVELEGTTENIAAQALEHIHSNEVIMTIGFSRTVEAFLREAAR-KR 185
Query: 519 QFRVVVVDSRPKHEGQALLRRLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTT 578
+F V+V + P +G + L G+ T A+ +M V +V +G ++L+NG
Sbjct: 186 KFHVIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGAL 245
Query: 579 YSRVGTACVAMVAHAFRVPVLICCEAYKF 607
+ GT +A+ A P+++C +K
Sbjct: 246 RAVAGTHTLALAAKHHSTPLIVCAPMFKL 274
>sp|Q99LD9|EI2BB_MOUSE Translation initiation factor eIF-2B subunit beta OS=Mus musculus
GN=Eif2b2 PE=2 SV=1
Length = 351
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 462 AALCNDIDRFINEKIILADKV---IVRHAATKVRDGDVLLTYGSSCVVEMILLYAHELGK 518
A L +I INE ++ + I A + +V++T G S VE L A +
Sbjct: 127 APLKANIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGYSRTVEAFLKEAAR-KR 185
Query: 519 QFRVVVVDSRPKHEGQALLRRLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTT 578
+F V+V + P +G + L +G+ T A+ +M V +V +G ++L+NG+
Sbjct: 186 KFHVIVAECAPFCQGHEMAVNLSKEGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGSL 245
Query: 579 YSRVGTACVAMVAHAFRVPVLICCEAYKF 607
+ GT +A+ A P+++C +K
Sbjct: 246 RAVAGTHTLALAAKHHSTPLIVCAPMFKL 274
>sp|Q28690|EI2BB_RABIT Translation initiation factor eIF-2B subunit beta OS=Oryctolagus
cuniculus GN=EIF2B2 PE=1 SV=1
Length = 351
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 4/149 (2%)
Query: 462 AALCNDIDRFINEKIILADKV---IVRHAATKVRDGDVLLTYGSSCVVEMILLYAHELGK 518
A L ++I INE ++ + I A + +V++T G S VE L A +
Sbjct: 127 AQLQSNIVEAINELLVELEGTTENIAAQALEHIHSNEVIMTIGLSRTVEAFLREAAR-KR 185
Query: 519 QFRVVVVDSRPKHEGQALLRRLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTT 578
+F V+V + P +G + L G+ T A+ +M V +V +G ++L+NG
Sbjct: 186 KFHVIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGAL 245
Query: 579 YSRVGTACVAMVAHAFRVPVLICCEAYKF 607
+ GT +A+ A P+++C +K
Sbjct: 246 RAVTGTHTLALAAKHHSTPLIVCAPMFKL 274
>sp|Q62818|EI2BB_RAT Translation initiation factor eIF-2B subunit beta OS=Rattus
norvegicus GN=Eif2b2 PE=2 SV=1
Length = 351
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 462 AALCNDIDRFINEKIILADKV---IVRHAATKVRDGDVLLTYGSSCVVEMILLYAHELGK 518
A L ++I INE ++ + I A + +V++T G S VE L A + +
Sbjct: 127 APLKSNIIEAINELLVELEGTTENIAAQALEHIHSNEVIMTIGFSRTVEAFLREAAQ-KR 185
Query: 519 QFRVVVVDSRPKHEGQALLRRLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTT 578
+F V+ + P +G + L G+ T A+ +M V +V +G ++L+NG+
Sbjct: 186 KFHVIAAECAPFCQGHEMAVNLSEAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGSL 245
Query: 579 YSRVGTACVAMVAHAFRVPVLICCEAYKF 607
+ GT +A+ A P+++C +K
Sbjct: 246 RAVAGTHTLALAAKHHSTPLIVCAPMFKL 274
>sp|Q90511|EI2BB_TAKRU Translation initiation factor eIF-2B subunit beta OS=Takifugu
rubripes GN=eif2b2 PE=3 SV=1
Length = 355
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Query: 462 AALCNDIDRFINEKIILADKV---IVRHAATKVRDGDVLLTYGSSCVVEMILLYAHELGK 518
AAL ++ INE + + I A + +V++T G S VE L A +
Sbjct: 131 AALRANVIEAINELLTELEGTTDNIAMQALEHIHSNEVIMTVGRSRTVEAFLKDAAR-KR 189
Query: 519 QFRVVVVDSRPKHEGQALLRRLLAKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTT 578
+F V+V + P +G + L G+ T A+ +M V +V +G +VL+NG
Sbjct: 190 KFHVIVAECAPFCQGHKMATSLSTAGIETTVIADAAIFAVMSRVNKVIIGTQTVLANGGL 249
Query: 579 YSRVGTACVAMVAHAFRVPVLICCEAYKF 607
+ GT +A+ A P+++C +K
Sbjct: 250 RAVNGTHTLALAAKHHSTPLIVCAPMFKL 278
>sp|Q66E16|MTNA_YERPS Methylthioribose-1-phosphate isomerase OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=mtnA
PE=3 SV=1
Length = 346
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 427 LIECRPLSMS-MGNAIRFQKSRIAKLPLTLSETEAKAALCNDIDRFINEKIILADKVIVR 485
L E RP +++ M N R Q++ + P ++ A+A D DR + E+I +
Sbjct: 87 LRESRPTAVNLMNNLARMQQALLQ--PNWVTAMAAEALRLVDEDRELCERI-------AQ 137
Query: 486 HAATKVRDGDVLLTYGSSCVVEM--------ILLYAHELGKQFRVVVVDSRPKHEGQALL 537
H A V+ G LLT+ ++ + +LL AH+ G +V V ++RP +G L
Sbjct: 138 HGAALVKPGSNLLTHCNTGGLATAGIGTAIGVLLRAHQQGNLRQVWVDETRPLLQGGRLT 197
Query: 538 RRLLAKGLSCTYTHI---NAVSYIMH-EVTRVFLGASSVLSNGTTYSRVGTACVAMVAHA 593
L + L Y I A S + H +V +++GA + +NG +++GT +A++AH
Sbjct: 198 AWELGE-LGIPYQLICDSMAASLMAHGQVDAIWVGADRIAANGDVANKIGTYSLAVLAHY 256
Query: 594 FRVPVLI 600
R+P +
Sbjct: 257 HRIPFYV 263
>sp|B2K633|MTNA_YERPB Methylthioribose-1-phosphate isomerase OS=Yersinia
pseudotuberculosis serotype IB (strain PB1/+) GN=mtnA
PE=3 SV=1
Length = 346
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 23/187 (12%)
Query: 427 LIECRPLSMS-MGNAIRFQKSRIAKLPLTLSETEAKAALCNDIDRFINEKIILADKVIVR 485
L E RP +++ M N R Q++ + P ++ A+A D DR + E+I +
Sbjct: 87 LRESRPTAVNLMNNLARMQQALLQ--PNWVTAMAAEALRLVDEDRELCERI-------AQ 137
Query: 486 HAATKVRDGDVLLTYGSSCVVEM--------ILLYAHELGKQFRVVVVDSRPKHEGQALL 537
H A V+ G LLT+ ++ + +LL AH+ G +V V ++RP +G L
Sbjct: 138 HGAALVKPGSNLLTHCNTGGLATAGIGTAIGVLLRAHQQGNLRQVWVDETRPLLQGGRLT 197
Query: 538 RRLLAKGLSCTYTHI---NAVSYIMH-EVTRVFLGASSVLSNGTTYSRVGTACVAMVAHA 593
L + L Y I A S + H +V +++GA + +NG +++GT +A++AH
Sbjct: 198 AWELGE-LGIPYQLICDSMAASLMAHGQVDAIWVGADRIAANGDVANKIGTYSLAVLAHY 256
Query: 594 FRVPVLI 600
R+P +
Sbjct: 257 HRIPFYV 263
>sp|Q9USP0|EI2BA_SCHPO Translation initiation factor eIF-2B subunit alpha
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tif221 PE=3 SV=1
Length = 341
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%)
Query: 491 VRDGDVLLTYGSSCVVEMILLYAHELGKQFRVVVVDSRPKHEGQALLRRLLAKGLSCTYT 550
+RDG V+LT+G S V +LL A + +F+V V +SRP G + R L +
Sbjct: 133 IRDGSVILTHGFSRGVAAVLLAAAKRHVRFKVFVTESRPSGSGCLMTRTLKNACIPTCMV 192
Query: 551 HINAVSYIMHEVTRVFLGASSVLSNGTTYSRVGTACVAMVAHAFRVPVLICCEAYKF 607
+AVS+ M+ V V +GA V+ NG +++GT +A+ A P E++KF
Sbjct: 193 LDSAVSFTMNRVDLVLVGAEGVVENGGLINQIGTFQLAVFAKHAHKPFYAVAESHKF 249
>sp|Q39ZK3|MTNA_GEOMG Methylthioribose-1-phosphate isomerase OS=Geobacter metallireducens
(strain GS-15 / ATCC 53774 / DSM 7210) GN=mtnA PE=3 SV=1
Length = 346
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 19/196 (9%)
Query: 419 KISSYVSFLIECRPLSMSMGNAIRFQKSRIAKLPLTLSETEAKAALCNDIDRFINEKIIL 478
++ + L RP ++++ AI K R+A S E + L + R E + L
Sbjct: 77 QLDNVCDVLARTRPTAVNLFWAIERMK-RVAADNCGGSLDEVREVLKAEAIRIEEEDLAL 135
Query: 479 ADKVIVRHAATKVRDGDVLLT-----------YGSSCVVEMILLYAHELGKQFRVVVVDS 527
K I RH A + +G +LT YG++ V + AHE GK +V ++
Sbjct: 136 C-KAIGRHGAGLIPEGATVLTHCNAGGLATAGYGTALGV---IRAAHEAGKNIQVFADET 191
Query: 528 RPKHEGQALL-RRLLAKGLSCTYTHINAVSYIMH--EVTRVFLGASSVLSNGTTYSRVGT 584
RP +G L L+ G+ T N + M E+T +GA + +NG T +++GT
Sbjct: 192 RPWLQGARLTAWELMKDGIPVTLISDNMAGFFMKRGEITCCVVGADRIAANGDTANKIGT 251
Query: 585 ACVAMVAHAFRVPVLI 600
VA++A +P +
Sbjct: 252 YSVAVLAKENNIPFYV 267
>sp|A8GAB1|MTNA_SERP5 Methylthioribose-1-phosphate isomerase OS=Serratia proteamaculans
(strain 568) GN=mtnA PE=3 SV=1
Length = 342
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 21/182 (11%)
Query: 431 RPLSMSMGNAIRFQKSRIAKLPLTLSETEAKAALCNDIDRFINEKIILADKVIVRHAATK 490
RP ++++ N + ++ L L++ + A+ + R + E L D+ I H A
Sbjct: 86 RPTAVNLMN-------NLDRMKLALAQPQWVPAMVEEAQRLVEEDRKLCDR-IADHGAGL 137
Query: 491 VRDGDVLLTYGSSCVVEM--------ILLYAHELGKQFRVVVVDSRPKHEGQALLRRLLA 542
V+ G LLT+ ++ + +LL AH+ GK +V V ++RP +G L L
Sbjct: 138 VKPGSRLLTHCNTGGLATAGIGTAIGVLLRAHQQGKVQQVWVDETRPLLQGGRLTAWELG 197
Query: 543 KGLSCTYTHI---NAVSYIMH-EVTRVFLGASSVLSNGTTYSRVGTACVAMVAHAFRVPV 598
+ L Y I A S + +V V++GA + +NG +++GT +A++AH R+P
Sbjct: 198 E-LGIPYRLICDSMAASLMAQGQVDAVWVGADRIAANGDVANKIGTYSLAVLAHYHRIPF 256
Query: 599 LI 600
+
Sbjct: 257 YV 258
>sp|B9LZ20|MTNA_GEOSF Methylthioribose-1-phosphate isomerase OS=Geobacter sp. (strain
FRC-32) GN=mtnA PE=3 SV=1
Length = 346
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 17/143 (11%)
Query: 472 INEKIILADKVIVRHAATKVRDGDVLLT-----------YGSSCVVEMILLYAHELGKQF 520
I E+ + + I RH A +R+G +LT YG++ V + AHE GK
Sbjct: 128 IEEEDLEICRAIGRHGAPLIREGATVLTHCNAGGLATAGYGTALGV---IRAAHEAGKNI 184
Query: 521 RVVVVDSRPKHEGQALL-RRLLAKGLSCTYTHINAVSYIMHE--VTRVFLGASSVLSNGT 577
+V ++RP +G L L+ G+ T N Y M + +T +GA + +NG
Sbjct: 185 QVFADETRPWLQGARLTAWELMKDGIPVTLIADNMAGYFMKKGAITACVVGADRIAANGD 244
Query: 578 TYSRVGTACVAMVAHAFRVPVLI 600
T +++GT VA++A ++P +
Sbjct: 245 TANKIGTYSVAVLAKENKIPFYV 267
>sp|A4ICE5|MTNA_LEIIN Methylthioribose-1-phosphate isomerase OS=Leishmania infantum
GN=LinJ36.0740 PE=3 SV=1
Length = 375
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 26/199 (13%)
Query: 415 DLTAKISSYVSFLIECRPLSMSMGNAIRFQKSRIAKLPLTLSETEAKAALCNDIDRFINE 474
++ A S F++ RP ++++ N +R K ++ KL T + E A C ++ +
Sbjct: 84 EVQAFFLSSCDFVMTSRPTAVNLFNCLRDLKEQVEKLDPTKAAAEVAQA-CVELAEAVYT 142
Query: 475 KIILADKVIVRHAATKV--------RDGDVLLT-----------YGSSCVVEMILLYAHE 515
K + ++ I+RH A + RD +LT YG++ V L Y
Sbjct: 143 KDVAFNEGIMRHGAAHILAVAKAEGRDKVSILTICNTGALATSRYGTALGVVRQLFYD-- 200
Query: 516 LGKQFRVVVVDSRPKHEGQAL-LRRLLAKGLSCTYTHINAVSYIM--HEVTRVFLGASSV 572
GK RV ++RP ++G L + + +G+ CT A S +M ++ V +GA +
Sbjct: 201 -GKLERVYACETRPWNQGARLTVYECVQEGIPCTLICDGAASSLMLNRKIDAVVVGADRI 259
Query: 573 LSNGTTYSRVGTACVAMVA 591
NG T +++GT +A+ A
Sbjct: 260 CQNGDTANKIGTYNLAVSA 278
>sp|C6DCZ1|MTNA_PECCP Methylthioribose-1-phosphate isomerase OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=mtnA PE=3
SV=1
Length = 342
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 95/195 (48%), Gaps = 21/195 (10%)
Query: 418 AKISSYVSFLIECRPLSMSMGNAIRFQKSRIAKLPLTLSETEAKAALCNDIDRFINEKII 477
A+++ + L RP ++++ N + ++ L L++ + AAL + R + E
Sbjct: 73 AELAQALETLRASRPTAVNLMN-------NLDRMKLALAQPQFVAALVQEALRLVEEDRA 125
Query: 478 LADKVIVRHAATKVRDGDVLLTYGSSCVVEM--------ILLYAHELGKQFRVVVVDSRP 529
L ++ I H A V+ LLT+ ++ + +LL AH+ GK +V V ++RP
Sbjct: 126 LCER-IADHGAALVKPNSRLLTHCNTGGLATAGIGTAIGVLLRAHQQGKVTQVWVDETRP 184
Query: 530 KHEGQALLRRLLAKGLSCTYTHI---NAVSYIMH-EVTRVFLGASSVLSNGTTYSRVGTA 585
+G L L + L Y I A S + +V +++GA + +NG +++GT
Sbjct: 185 LLQGGRLTAWELGE-LGIPYQLICDSMAASLMAQGQVDAIWVGADRIAANGDVANKIGTY 243
Query: 586 CVAMVAHAFRVPVLI 600
+A++AH ++P +
Sbjct: 244 SLAVLAHYHQIPFYV 258
>sp|B1JIK3|MTNA_YERPY Methylthioribose-1-phosphate isomerase OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=mtnA
PE=3 SV=1
Length = 346
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 23/187 (12%)
Query: 427 LIECRPLSMS-MGNAIRFQKSRIAKLPLTLSETEAKAALCNDIDRFINEKIILADKVIVR 485
L E RP +++ M N R Q++ + P ++ A+A D DR + E+I +
Sbjct: 87 LRESRPTAVNLMNNLARMQQALLQ--PNWVTAMAAEALRLVDEDRELCERI-------AQ 137
Query: 486 HAATKVRDGDVLLTYGSSCVVEM--------ILLYAHELGKQFRVVVVDSRPKHEGQALL 537
H A V+ G LLT+ ++ + +LL AH+ G +V V ++RP +G L
Sbjct: 138 HGAALVKPGSNLLTHCNTGGLATAGIGTAIGVLLRAHQQGNLRQVWVDETRPLLQGGRLT 197
Query: 538 RRLLAKGLSCTYTHI---NAVSYIMH-EVTRVFLGASSVLSNGTTYSRVGTACVAMVAHA 593
L + L Y I A S + +V +++GA + +NG +++GT +A++AH
Sbjct: 198 AWELGE-LGIPYQLICDSMAASLMAQGQVDAIWVGADRIAANGDVANKIGTYSLAVLAHY 256
Query: 594 FRVPVLI 600
R+P +
Sbjct: 257 HRIPFYV 263
>sp|A4TPM9|MTNA_YERPP Methylthioribose-1-phosphate isomerase OS=Yersinia pestis (strain
Pestoides F) GN=mtnA PE=3 SV=1
Length = 346
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 23/187 (12%)
Query: 427 LIECRPLSMS-MGNAIRFQKSRIAKLPLTLSETEAKAALCNDIDRFINEKIILADKVIVR 485
L E RP +++ M N R Q++ + P ++ A+A D DR + E+I +
Sbjct: 87 LRESRPTAVNLMNNLARMQQALLQ--PNWVTAMAAEALRLVDEDRELCERI-------AQ 137
Query: 486 HAATKVRDGDVLLTYGSSCVVEM--------ILLYAHELGKQFRVVVVDSRPKHEGQALL 537
H A V+ G LLT+ ++ + +LL AH+ G +V V ++RP +G L
Sbjct: 138 HGAALVKPGSNLLTHCNTGGLATAGIGTAIGVLLRAHQQGNLRQVWVDETRPLLQGGRLT 197
Query: 538 RRLLAKGLSCTYTHI---NAVSYIMH-EVTRVFLGASSVLSNGTTYSRVGTACVAMVAHA 593
L + L Y I A S + +V +++GA + +NG +++GT +A++AH
Sbjct: 198 AWELGE-LGIPYQLICDSMAASLMAQGQVDAIWVGADRIAANGDVANKIGTYSLAVLAHY 256
Query: 594 FRVPVLI 600
R+P +
Sbjct: 257 HRIPFYV 263
>sp|A9R2Z5|MTNA_YERPG Methylthioribose-1-phosphate isomerase OS=Yersinia pestis bv.
Antiqua (strain Angola) GN=mtnA PE=3 SV=1
Length = 346
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 23/187 (12%)
Query: 427 LIECRPLSMS-MGNAIRFQKSRIAKLPLTLSETEAKAALCNDIDRFINEKIILADKVIVR 485
L E RP +++ M N R Q++ + P ++ A+A D DR + E+I +
Sbjct: 87 LRESRPTAVNLMNNLARMQQALLQ--PNWVTAMAAEALRLVDEDRELCERI-------AQ 137
Query: 486 HAATKVRDGDVLLTYGSSCVVEM--------ILLYAHELGKQFRVVVVDSRPKHEGQALL 537
H A V+ G LLT+ ++ + +LL AH+ G +V V ++RP +G L
Sbjct: 138 HGAALVKPGSNLLTHCNTGGLATAGIGTAIGVLLRAHQQGNLRQVWVDETRPLLQGGRLT 197
Query: 538 RRLLAKGLSCTYTHI---NAVSYIMH-EVTRVFLGASSVLSNGTTYSRVGTACVAMVAHA 593
L + L Y I A S + +V +++GA + +NG +++GT +A++AH
Sbjct: 198 AWELGE-LGIPYQLICDSMAASLMAQGQVDAIWVGADRIAANGDVANKIGTYSLAVLAHY 256
Query: 594 FRVPVLI 600
R+P +
Sbjct: 257 HRIPFYV 263
>sp|A7FLL1|MTNA_YERP3 Methylthioribose-1-phosphate isomerase OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=mtnA PE=3 SV=1
Length = 346
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 23/187 (12%)
Query: 427 LIECRPLSMS-MGNAIRFQKSRIAKLPLTLSETEAKAALCNDIDRFINEKIILADKVIVR 485
L E RP +++ M N R Q++ + P ++ A+A D DR + E+I +
Sbjct: 87 LRESRPTAVNLMNNLARMQQALLQ--PNWVTAMAAEALRLVDEDRELCERI-------AQ 137
Query: 486 HAATKVRDGDVLLTYGSSCVVEM--------ILLYAHELGKQFRVVVVDSRPKHEGQALL 537
H A V+ G LLT+ ++ + +LL AH+ G +V V ++RP +G L
Sbjct: 138 HGAALVKPGSNLLTHCNTGGLATAGIGTAIGVLLRAHQQGNLRQVWVDETRPLLQGGRLT 197
Query: 538 RRLLAKGLSCTYTHI---NAVSYIMH-EVTRVFLGASSVLSNGTTYSRVGTACVAMVAHA 593
L + L Y I A S + +V +++GA + +NG +++GT +A++AH
Sbjct: 198 AWELGE-LGIPYQLICDSMAASLMAQGQVDAIWVGADRIAANGDVANKIGTYSLAVLAHY 256
Query: 594 FRVPVLI 600
R+P +
Sbjct: 257 HRIPFYV 263
>sp|B1IJF0|MTNA_CLOBK Methylthioribose-1-phosphate isomerase OS=Clostridium botulinum
(strain Okra / Type B1) GN=mtnA PE=3 SV=1
Length = 349
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 425 SFLIECRPLSMSMGNAIRFQKSRIAKLPLTLSETEAKAALCNDIDRFINEKIILADKVIV 484
S+L RP ++++ A++ +S+ A E K+ L + R I+E+ I K I
Sbjct: 86 SYLDSSRPTAVNLSWALKVMESK-ALENKDKDVKEIKSILREEAKR-IHEEDIEICKTIG 143
Query: 485 RHAATKVRDGDVLLT-----------YGSSCVVEMILLYAHELGKQFRVVVVDSRPKHEG 533
+ T ++DG +LT YG++ + A E G F+V ++RP+ +G
Sbjct: 144 ENLITLLKDGMGILTHCNAGQLATSKYGTATSP---MYLAKEKGWNFKVYSDETRPRLQG 200
Query: 534 QALL-RRLLAKGLSCTYTHINAVSYIMHE--VTRVFLGASSVLSNGTTYSRVGTACVAMV 590
L L G+ T N + +M + + V +G V +NG T +++GT V+++
Sbjct: 201 STLTALELYEAGIDVTTITDNMAAMVMSQGKIDAVIVGCDRVAANGDTANKIGTMGVSIL 260
Query: 591 AHAFRVPVLICC 602
A F +P+ I
Sbjct: 261 AKYFGIPMYIAA 272
>sp|O29877|MTNA_ARCFU Putative methylthioribose-1-phosphate isomerase OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_0370 PE=1 SV=1
Length = 339
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 486 HAATKVRDGDVLLTY---GSSCVVEM-----ILLYAHELGKQFRVVVVDSRPKHEGQAL- 536
+ A + DGDV+LTY G V+ ++ A E GK+ RV+ ++RP ++G L
Sbjct: 137 YGAELLEDGDVVLTYCNAGRLATVDWGTALGVVRSAVEQGKEIRVIACETRPLNQGSRLT 196
Query: 537 LRRLLAKGLSCTYTHINAVSYIMHE--VTRVFLGASSVLSNGTTYSRVGTACVAMVAHAF 594
L+ G+ T + V +M + V +V +GA ++ + ++++GT V++VA
Sbjct: 197 CWELMEDGIDVTLITDSMVGIVMQKGMVDKVIVGADRIVRDA-VFNKIGTYTVSVVAKHH 255
Query: 595 RVPVLICCEAYKF-HERVQLDSI 616
+P + F ER D +
Sbjct: 256 NIPFYVAAPKATFDWERTAKDVV 278
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 235,676,893
Number of Sequences: 539616
Number of extensions: 10326535
Number of successful extensions: 42526
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 652
Number of HSP's that attempted gapping in prelim test: 41077
Number of HSP's gapped (non-prelim): 1541
length of query: 630
length of database: 191,569,459
effective HSP length: 124
effective length of query: 506
effective length of database: 124,657,075
effective search space: 63076479950
effective search space used: 63076479950
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)