BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 006805
         (630 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224078834|ref|XP_002305646.1| predicted protein [Populus trichocarpa]
 gi|222848610|gb|EEE86157.1| predicted protein [Populus trichocarpa]
          Length = 635

 Score =  981 bits (2535), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/634 (74%), Positives = 536/634 (84%), Gaps = 8/634 (1%)

Query: 1   MSRVLTFRNIWRAAQSVLTNERGYHS---ELTKYGAVVAVGLRVPYYRFYSHYGFPSGGH 57
           + R LT  NI + A+ + + ++   +   E+ KYG VV+VGL +P +R+YS Y FPS G+
Sbjct: 6   VGRFLTIGNIKKVARLIFSKQKSSSNQLLEVKKYGTVVSVGLHLPQFRYYSQYSFPSRGY 65

Query: 58  CSVPVYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQ 117
            S  +YNVK+   R C     S  S S V T  AQ+AWKRL    S     FP ISRIAQ
Sbjct: 66  SSFALYNVKEQFGRRCFTSCYS--STSDVVTRNAQLAWKRLCRKGSANGWSFPRISRIAQ 123

Query: 118 AFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYS 177
           A SLALTRS L+VP  +A T GQ+AWAQR   E++++P  N+ Y RAQDGHA+VT ++ +
Sbjct: 124 AVSLALTRSHLVVPSALALTCGQVAWAQRTLVESDFYP--NSLYMRAQDGHAYVTLLVSA 181

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQW 237
           +V+  +LL+RA+YL +LFSPS+MMAPFADS GP+FR++WLHVV RTLE AGPAFIKWGQW
Sbjct: 182 VVDAFVLLVRAIYLAILFSPSMMMAPFADSCGPEFRKIWLHVVHRTLEKAGPAFIKWGQW 241

Query: 238 AATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSI 297
           AATRPDLFPRDLC KLSELHSKAPEHSFAYTKKTIERAFGR+LSEIF+ FEE PVASGSI
Sbjct: 242 AATRPDLFPRDLCTKLSELHSKAPEHSFAYTKKTIERAFGRKLSEIFEDFEEVPVASGSI 301

Query: 298 AQVHRASLRFRYPGQK-VKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLR 356
           AQVHRASLRFRYPG+K  KP +VAVKVRHPGVGESIRRDF+IINL AKIS+ IP + WLR
Sbjct: 302 AQVHRASLRFRYPGKKQTKPTIVAVKVRHPGVGESIRRDFMIINLVAKISTFIPTLNWLR 361

Query: 357 LDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQG 416
           LDES+QQF VFMMSQVDLAREAA LSRFIYNFRRWKDVSFPKPVYPLVHPAVLVE+YEQG
Sbjct: 362 LDESLQQFGVFMMSQVDLAREAAQLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVESYEQG 421

Query: 417 ECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKR 476
           E VS YVD+L+GH R+KSALAHIGTHALLKMLLVDNFIHADMHPGNILVR+++  SS+KR
Sbjct: 422 ESVSHYVDDLEGHNRIKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRLSKNSSSRKR 481

Query: 477 LFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKA 536
           LF+SKPHVIFLDVGMTAELS+ DR+NL+ FFKAVA RDGRTAAE  L LSK+QNCPNPKA
Sbjct: 482 LFKSKPHVIFLDVGMTAELSQGDRINLINFFKAVATRDGRTAAESALSLSKRQNCPNPKA 541

Query: 537 FIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRK 596
           FIEEV+E+F FWGTPEGDLVHPA+CMQQLLEKVRRHRVN+DGNVCTVMVTTLVLEGWQRK
Sbjct: 542 FIEEVEESFTFWGTPEGDLVHPADCMQQLLEKVRRHRVNIDGNVCTVMVTTLVLEGWQRK 601

Query: 597 LDPGYNVMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           LDPGYNVM TLQTLLL+ADWAKSLSYTIDGLM P
Sbjct: 602 LDPGYNVMQTLQTLLLRADWAKSLSYTIDGLMGP 635


>gi|356549423|ref|XP_003543093.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           2-like [Glycine max]
          Length = 625

 Score =  974 bits (2518), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/627 (76%), Positives = 535/627 (85%), Gaps = 6/627 (0%)

Query: 7   FRNIWRAAQSVL-TNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVPVYNV 65
            RNI RAAQSV   N R  + E++K G VV+VG  + + R Y  Y FPS    S   +  
Sbjct: 2   LRNIRRAAQSVCRINSR--YLEVSKNGPVVSVGPNIHHCRLYMQYKFPSEACSSFLWHGT 59

Query: 66  KQLLCRSCSVRSLSVASASSVATHQAQIAWKRLF-YYSSFRDQIFP-CISRIAQAFSLAL 123
           ++   +  S R+ SV SAS+  TH +QIAWKRL+  Y S  D  FP  ++ IAQA SLAL
Sbjct: 60  REGFRKRGSFRNFSVTSASNTVTHHSQIAWKRLYRKYCSSGDGTFPPTVNMIAQAVSLAL 119

Query: 124 TRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVI 183
            RS LLVPGI+AFT G+LA AQ+  A+ E +PSQN  Y RAQDG+ ++ +  + +VE +I
Sbjct: 120 ARSYLLVPGILAFTCGELALAQQNWADAERYPSQNGLYMRAQDGYNYMFTFAFIIVEGLI 179

Query: 184 LLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPD 243
           LLMRALYL +LFSPSI+MAPFAD FGP FR+LWLHVV RTLE +GPAFIKWGQWAATRPD
Sbjct: 180 LLMRALYLAILFSPSIVMAPFADCFGPNFRKLWLHVVHRTLEKSGPAFIKWGQWAATRPD 239

Query: 244 LFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           LFPRDLC KLSELH+KAPEHSF YTKKTIERAFGR++SEIFD FEE PVASGSIAQVHRA
Sbjct: 240 LFPRDLCTKLSELHTKAPEHSFCYTKKTIERAFGRKISEIFDNFEELPVASGSIAQVHRA 299

Query: 304 SLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ 363
           SL+ RYPGQ+ KP++VAVKVRHPGVGESIRRDF IINLAAKIS  IPA+ WLRLDESVQQ
Sbjct: 300 SLKCRYPGQQAKPLLVAVKVRHPGVGESIRRDFAIINLAAKISKFIPALNWLRLDESVQQ 359

Query: 364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYV 423
           FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE+GE VS YV
Sbjct: 360 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEKGESVSYYV 419

Query: 424 DELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH 483
           D+LQGHER+KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRV+Q K S+KRLF+SKPH
Sbjct: 420 DDLQGHERVKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVSQNK-SRKRLFKSKPH 478

Query: 484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDE 543
           V+FLDVGMTAELS +DRVNL+EFFKAVARRDGRTAAEC L LS QQNCPNP+AFIEEV+E
Sbjct: 479 VVFLDVGMTAELSGSDRVNLLEFFKAVARRDGRTAAECALNLSNQQNCPNPEAFIEEVEE 538

Query: 544 AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           +F FWGTPEGD+VHPAECM+QLLEKVRRHRVN+DGNVCTVMVTTLVLEGWQRKLDPGYNV
Sbjct: 539 SFTFWGTPEGDIVHPAECMEQLLEKVRRHRVNIDGNVCTVMVTTLVLEGWQRKLDPGYNV 598

Query: 604 MDTLQTLLLKADWAKSLSYTIDGLMAP 630
           M TLQTLLL+ADWAKSLSYTIDGLMAP
Sbjct: 599 MQTLQTLLLRADWAKSLSYTIDGLMAP 625


>gi|224114105|ref|XP_002316668.1| predicted protein [Populus trichocarpa]
 gi|222859733|gb|EEE97280.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  961 bits (2483), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/605 (76%), Positives = 522/605 (86%), Gaps = 6/605 (0%)

Query: 27  ELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQLLCRSCSVRSLSVASASSV 86
           E+ ++G VV+V L +P +R YS Y FPS  + S  + N+K+   R C  R+ S  S    
Sbjct: 10  EVKEHGTVVSVCLHLPQFRNYSQYSFPSREYSSFALCNIKEQFGRRCFTRNYSFTS--DA 67

Query: 87  ATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQR 146
            TH AQ+AWKRLF   S     FP ISRIAQA SLALTRS L+VP  +  T GQ+AWAQR
Sbjct: 68  VTHNAQLAWKRLFRKGSASGWSFPRISRIAQAVSLALTRSQLVVPSALVLTCGQVAWAQR 127

Query: 147 VSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFAD 206
              E +Y+P   + Y RAQDGHA+VTS++ ++VE  +LL+RA+YL +LFSPS++MAPFAD
Sbjct: 128 TLVEPDYYP--GSLYMRAQDGHAYVTSLVSAIVEAFVLLVRAIYLAILFSPSLLMAPFAD 185

Query: 207 SFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFA 266
           S GP+FR++WLHVV RTLE AGPAFIKWGQWAATRPDLFPRDLC KLSELHSKAPEHSFA
Sbjct: 186 SCGPEFRKMWLHVVHRTLEKAGPAFIKWGQWAATRPDLFPRDLCTKLSELHSKAPEHSFA 245

Query: 267 YTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQK-VKPIVVAVKVRH 325
           YTKKTIERAFGR+LSEIF+GFEE PVASGSIAQVHRASL+  YPG+K  KP VVAVKVRH
Sbjct: 246 YTKKTIERAFGRKLSEIFEGFEEVPVASGSIAQVHRASLKCHYPGKKQTKPTVVAVKVRH 305

Query: 326 PGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFI 385
           PGVGESIRRDF+IINL AKIS+ +PA+ WLRLDESVQQFAVFMMSQVDLAREAAHLSRFI
Sbjct: 306 PGVGESIRRDFMIINLVAKISTFLPALNWLRLDESVQQFAVFMMSQVDLAREAAHLSRFI 365

Query: 386 YNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALL 445
           YNFRRWKDVSFPKPVYPLVHPAVLVE+YEQGE VS YVD+L+GH  +K+ALAHIGTHALL
Sbjct: 366 YNFRRWKDVSFPKPVYPLVHPAVLVESYEQGESVSHYVDDLEGHNWIKTALAHIGTHALL 425

Query: 446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE 505
           KMLLVDNFIHADMHPGNILVRV+   SS+KRLF+SKPHV+FLDVGMTAELS+ DRVNL++
Sbjct: 426 KMLLVDNFIHADMHPGNILVRVS-PNSSRKRLFKSKPHVVFLDVGMTAELSQGDRVNLID 484

Query: 506 FFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQL 565
           FFKA+ARRDGRTAAECTLRLSK+QNCPNPKAFIEEV+EAF FWGT +GDLVHPAECMQQL
Sbjct: 485 FFKAIARRDGRTAAECTLRLSKRQNCPNPKAFIEEVEEAFTFWGTAQGDLVHPAECMQQL 544

Query: 566 LEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYTID 625
           LEKVRRHRVN+DGNVCTVMVTTLVLEGWQRKLDP YNVM TLQTLLL+ADWAKSLSYTID
Sbjct: 545 LEKVRRHRVNIDGNVCTVMVTTLVLEGWQRKLDPEYNVMQTLQTLLLQADWAKSLSYTID 604

Query: 626 GLMAP 630
           GLMAP
Sbjct: 605 GLMAP 609


>gi|356524754|ref|XP_003530993.1| PREDICTED: probable serine/threonine-protein kinase abkC-like
           [Glycine max]
          Length = 622

 Score =  938 bits (2425), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/623 (72%), Positives = 523/623 (83%), Gaps = 5/623 (0%)

Query: 9   NIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQL 68
           N+ + AQS+L   R  + E ++  A  +VG  +   R Y  Y FP  G  S   +  ++ 
Sbjct: 4   NVGKVAQSILRTHRRRYLEASRNEAFTSVGPNIKQCRMYMQYKFPIEGCNSFLWHWTREN 63

Query: 69  LCRSCSVRSLSVASASSVATHQAQIAWKRLFY-YSSFRDQIFPCISRIAQAFSLALTRSP 127
             + CS R+ SV SA +VA + ++IAWK L+  YSS     F  I+ IAQA SLALTRS 
Sbjct: 64  FHKGCSFRNFSVTSARNVAAYNSRIAWKLLYKKYSSNGYNGFTSINMIAQAVSLALTRSY 123

Query: 128 LLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMR 187
           LLVPG +AF SG+LA AQ+  A+TE++PSQNA Y  AQDG+ ++ + ++ +VE ++LL+R
Sbjct: 124 LLVPGFLAFASGKLALAQQNGADTEFYPSQNALYMHAQDGYGYMFAFVFIVVESLVLLVR 183

Query: 188 ALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPR 247
           A+YL +LFSPSI+MAP AD FGP+FR++WL VV RTLE AGPAFIKWGQWAATRPDLFPR
Sbjct: 184 AIYLAILFSPSILMAPLADYFGPEFRKMWLSVVHRTLEKAGPAFIKWGQWAATRPDLFPR 243

Query: 248 DLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRF 307
           DLC KL+EL +KAP+HSF+YTKKTIERAFGR++SEIF+ FEE PVASGSIAQVHRASL++
Sbjct: 244 DLCTKLAELQTKAPQHSFSYTKKTIERAFGRKISEIFENFEEVPVASGSIAQVHRASLKY 303

Query: 308 RYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVF 367
           RYPGQ+ KP+VVAVKVRHPGVGESIRRDF IINL AK S  I A+ WLRLDESVQQFAVF
Sbjct: 304 RYPGQQAKPLVVAVKVRHPGVGESIRRDFAIINLVAKSSKFIHALNWLRLDESVQQFAVF 363

Query: 368 MMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQ 427
           MMSQVDLAREAAHLSRFIYNFRR +DVSFPKPVYPLVHPAVLVETYE GE VS YVDELQ
Sbjct: 364 MMSQVDLAREAAHLSRFIYNFRRSRDVSFPKPVYPLVHPAVLVETYENGESVSHYVDELQ 423

Query: 428 GHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFL 487
           GHER+KSALAHIGT+ALLKMLLVDNFIHADMHPGNILVR        KRLF+SKPHVIFL
Sbjct: 424 GHERIKSALAHIGTNALLKMLLVDNFIHADMHPGNILVR----SKPHKRLFKSKPHVIFL 479

Query: 488 DVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF 547
           DVGMTAELS +DRVNL+EFFKAVA RDGRTAAECTLRLSKQQNCPNPKAF+EE++E+F F
Sbjct: 480 DVGMTAELSGSDRVNLLEFFKAVAHRDGRTAAECTLRLSKQQNCPNPKAFVEEMEESFTF 539

Query: 548 WGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
           WGTPEGDLVHPAECM+QLLEKVRRH+VNVDGNVCTV+VTTLVLEGWQRKLDPGY+VM+TL
Sbjct: 540 WGTPEGDLVHPAECMEQLLEKVRRHKVNVDGNVCTVLVTTLVLEGWQRKLDPGYDVMNTL 599

Query: 608 QTLLLKADWAKSLSYTIDGLMAP 630
           QTLLL+ADWAKSLSYTIDGLMAP
Sbjct: 600 QTLLLRADWAKSLSYTIDGLMAP 622


>gi|225469916|ref|XP_002269141.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           2-like [Vitis vinifera]
          Length = 579

 Score =  927 bits (2397), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/568 (78%), Positives = 506/568 (89%)

Query: 63  YNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLA 122
           +  +  +C+    ++ S  SAS+VATH AQ+AW+RL+   S   + FP + RIAQA SLA
Sbjct: 12  FGTRNSICKHGYSKNFSAVSASNVATHHAQVAWRRLYEIFSCNGKTFPPLGRIAQAVSLA 71

Query: 123 LTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECV 182
           L+RS L+VPG+ AFT G+LA AQR    T+++PS+N  Y RAQDGHA+VTS+L+S+ E V
Sbjct: 72  LSRSHLVVPGMFAFTFGELALAQRPLEYTDHYPSRNTLYMRAQDGHAYVTSLLFSVFEGV 131

Query: 183 ILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRP 242
           +L +RALYL +LFSP I+MAPFADSFG +FR LWL VV  TLE AGPAFIKWGQWAATRP
Sbjct: 132 VLFLRALYLAILFSPCIVMAPFADSFGHRFRNLWLQVVHGTLEKAGPAFIKWGQWAATRP 191

Query: 243 DLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHR 302
           DLF RD+C KL+ELH+KAPEHSFAYTKKTIE+AFGR LSEIF+ FEE PVASGSIAQVHR
Sbjct: 192 DLFARDICTKLAELHTKAPEHSFAYTKKTIEKAFGRNLSEIFEDFEELPVASGSIAQVHR 251

Query: 303 ASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ 362
           ASL+FRYPGQ+VKP+VVAVKVRHPGVGESIRRDF+IINL AKIS+ IP ++WLRLDESVQ
Sbjct: 252 ASLKFRYPGQQVKPVVVAVKVRHPGVGESIRRDFLIINLVAKISNFIPTLRWLRLDESVQ 311

Query: 363 QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRY 422
           QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVE+YE GE VS Y
Sbjct: 312 QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVESYEHGESVSHY 371

Query: 423 VDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKP 482
           VD+L+G +R+KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRV Q KSS+KRLF+SKP
Sbjct: 372 VDDLEGQKRIKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVTQSKSSRKRLFKSKP 431

Query: 483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVD 542
           HVIFLDVGMTAELSK+D+VNL+ FFKAVARRDGRTAAEC LRLSKQQNCPNPKAFI+EV+
Sbjct: 432 HVIFLDVGMTAELSKSDQVNLLGFFKAVARRDGRTAAECALRLSKQQNCPNPKAFIKEVE 491

Query: 543 EAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYN 602
           E+F+FWGTPEGD VHPAECMQQLLEKVRRH+VN+DGNVCTVMVTTLVLEGWQRKLDPGYN
Sbjct: 492 ESFSFWGTPEGDSVHPAECMQQLLEKVRRHKVNIDGNVCTVMVTTLVLEGWQRKLDPGYN 551

Query: 603 VMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           VM TLQTLLL+ADWAKSLSYTIDGLMAP
Sbjct: 552 VMQTLQTLLLRADWAKSLSYTIDGLMAP 579


>gi|449517365|ref|XP_004165716.1| PREDICTED: probable serine/threonine-protein kinase abkC-like
           [Cucumis sativus]
          Length = 624

 Score =  922 bits (2383), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/622 (71%), Positives = 518/622 (83%), Gaps = 1/622 (0%)

Query: 9   NIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQL 68
           NI +A +S+ TN R  H E+   G  V V   + + +  SHY F + GH   P+Y  K+ 
Sbjct: 4   NIRKAVRSLHTNHRFRHLEVRNIGTTVTVE-PLLHNKLLSHYRFLARGHGFSPLYCTKRN 62

Query: 69  LCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLALTRSPL 128
           L  + + R+  + + S+V  HQAQ  WKR+    S      P ++ +A+AF LA++RS L
Sbjct: 63  LSLTRNSRNFCIWTTSNVVKHQAQFVWKRVCSKFSSNGYSIPTLNEVARAFCLAMSRSHL 122

Query: 129 LVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRA 188
           +VPGI AFT G+LA AQR     + +PS N+FY RAQDGHA++ S+L+S +E +ILL RA
Sbjct: 123 IVPGIFAFTCGELACAQRTLTNMDPYPSHNSFYIRAQDGHAYLISLLFSTLEGIILLFRA 182

Query: 189 LYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRD 248
           LYL +LFSPSI+MAPFAD FG +FR+LWL VV R+LE  GPAFIKWGQWAATRPDLFPRD
Sbjct: 183 LYLAILFSPSILMAPFADVFGLRFRKLWLQVVHRSLEKGGPAFIKWGQWAATRPDLFPRD 242

Query: 249 LCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFR 308
           LC +LS+LH+KAPEHSFAY++KTIERAFGR+LSEIF+ FEE PVASGSIAQVHRASL+FR
Sbjct: 243 LCIELSKLHTKAPEHSFAYSRKTIERAFGRKLSEIFENFEEEPVASGSIAQVHRASLKFR 302

Query: 309 YPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368
           YPGQ+++P+VVAVKVRHPGVGE IRRDF+II+  AKIS  IP + WLRLDESVQQFAVFM
Sbjct: 303 YPGQQMEPMVVAVKVRHPGVGELIRRDFIIIDFVAKISKFIPTLNWLRLDESVQQFAVFM 362

Query: 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG 428
           MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGE VS YVD L+G
Sbjct: 363 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGESVSHYVDGLEG 422

Query: 429 HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLD 488
           +ERLKS+LAHIGTHALLKMLLVDNFIHADMHPGNILVRV+ +KS +KRLF+SKPHV+FLD
Sbjct: 423 YERLKSSLAHIGTHALLKMLLVDNFIHADMHPGNILVRVSPEKSRRKRLFKSKPHVVFLD 482

Query: 489 VGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFW 548
           VGMTAELS  DRVNL+EFFKAVARRDGRT AE  L+L+KQQNCP+P+AFIEEV  AF FW
Sbjct: 483 VGMTAELSGNDRVNLLEFFKAVARRDGRTVAERALKLAKQQNCPDPEAFIEEVTNAFDFW 542

Query: 549 GTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
            TPEGDLVHPAE +QQLLEKVRR+RVN+DGNVCTVMVTTLVLEGWQRKLDP YNVM+TLQ
Sbjct: 543 ATPEGDLVHPAEALQQLLEKVRRYRVNIDGNVCTVMVTTLVLEGWQRKLDPSYNVMETLQ 602

Query: 609 TLLLKADWAKSLSYTIDGLMAP 630
           TLLLKA WA+SLSYTI+GLMAP
Sbjct: 603 TLLLKAGWAESLSYTIEGLMAP 624


>gi|356554983|ref|XP_003545820.1| PREDICTED: probable serine/threonine-protein kinase abkC-like
           [Glycine max]
          Length = 516

 Score =  912 bits (2357), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/516 (84%), Positives = 474/516 (91%), Gaps = 1/516 (0%)

Query: 115 IAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSV 174
           IAQA SLAL RS  LVPGI+AFT G+LA AQR  AE E +PSQN  Y RAQDG+ ++ + 
Sbjct: 2   IAQAVSLALARSYFLVPGILAFTWGELALAQRNWAEAERYPSQNGLYMRAQDGYNYMFTF 61

Query: 175 LYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKW 234
            + +VE +ILLMRALYL +LFSPSI+MAPFAD FGP FR+LWL+VV RTLE +GPAFIKW
Sbjct: 62  TFIIVEGLILLMRALYLAILFSPSIVMAPFADCFGPNFRKLWLNVVHRTLEKSGPAFIKW 121

Query: 235 GQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVAS 294
           GQWAATRPDLFPRDLC KLSELH+KAPEHSF+YTKKTIERAFGR++SEIFD FEE PVAS
Sbjct: 122 GQWAATRPDLFPRDLCTKLSELHTKAPEHSFSYTKKTIERAFGRKISEIFDNFEELPVAS 181

Query: 295 GSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKW 354
           GSIAQVHRASL+ RYPGQ+ KP++VAVKVRHPGVGESIRRDF IINLAAKIS  IPA+ W
Sbjct: 182 GSIAQVHRASLKCRYPGQQAKPLLVAVKVRHPGVGESIRRDFAIINLAAKISKFIPALNW 241

Query: 355 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE 414
           LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE
Sbjct: 242 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE 301

Query: 415 QGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ 474
           +GE VS YVD+LQGHER+KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRV+Q K S+
Sbjct: 302 KGESVSYYVDDLQGHERVKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVSQSK-SR 360

Query: 475 KRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNP 534
           KRLF+SKPHV+FLDVGMTAELS +DRVNL+EFFKAVARRDGRTAAEC L LSKQQNCPNP
Sbjct: 361 KRLFKSKPHVVFLDVGMTAELSGSDRVNLLEFFKAVARRDGRTAAECALNLSKQQNCPNP 420

Query: 535 KAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQ 594
           +AFIEEV+E+F FWGTPEGD+VHPAECM+QLLEKVRRHRVN+DGNVCTVMVTTLVLEGWQ
Sbjct: 421 EAFIEEVEESFTFWGTPEGDIVHPAECMEQLLEKVRRHRVNIDGNVCTVMVTTLVLEGWQ 480

Query: 595 RKLDPGYNVMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           RKLDPGYNVM TLQTLLL+ADWAKSLSYTIDGLMAP
Sbjct: 481 RKLDPGYNVMQTLQTLLLRADWAKSLSYTIDGLMAP 516


>gi|297849522|ref|XP_002892642.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338484|gb|EFH68901.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 624

 Score =  900 bits (2326), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/633 (69%), Positives = 517/633 (81%), Gaps = 12/633 (1%)

Query: 1   MSRVLTFRNIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYG-FPSGGHCS 59
           MSR L  R + +  QS+L+N++   S+   Y       LR P +R YS  G  PS G+C 
Sbjct: 1   MSRFLISRIVGKQTQSLLSNQKERVSQWGSYRTAFTAALRSPQFRTYSSSGRVPSNGYCI 60

Query: 60  VPVYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAF 119
           +   ++K         RS S   A +V +H AQ+AWKRL Y  S R      IS +AQAF
Sbjct: 61  LAFRDLKGSFLSKHLSRSYSTVPARNVVSHHAQVAWKRLHYKYSER------ISTMAQAF 114

Query: 120 SLALTRSPLLVPGIIAFTSGQLAWAQRV-SAETEYFPSQNAFYTRAQDGHAFVTSVLYSL 178
           SL+LTRS LL+PGI+A T GQ+AWAQR   +   ++ S  + YTRA++G  F++S+L+S+
Sbjct: 115 SLSLTRSHLLIPGIVALTCGQVAWAQRAPGSGINHYASDKSLYTRAKNGPIFLSSLLFSV 174

Query: 179 VECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWA 238
           +E  IL+ RA Y+  LF+PSI+M    +S GP+FR++WL +V RTLE AGPAFIKWGQWA
Sbjct: 175 IEGFILIGRAFYIACLFTPSILMGLVVESCGPRFRKIWLQMVHRTLERAGPAFIKWGQWA 234

Query: 239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIA 298
           ATRPDLFP+DLC +LS+LHS APEHSFAYTKKTIE+AFGR+LSEIF+ FEE PVASGSIA
Sbjct: 235 ATRPDLFPKDLCLQLSKLHSNAPEHSFAYTKKTIEKAFGRKLSEIFEEFEEVPVASGSIA 294

Query: 299 QVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLD 358
           QVHRASLRF+YPGQK K  +VAVKVRHPGVGESIRRDFVIINL AKIS++IPA+KWLRLD
Sbjct: 295 QVHRASLRFQYPGQKSKSSLVAVKVRHPGVGESIRRDFVIINLVAKISTLIPALKWLRLD 354

Query: 359 ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGEC 418
           ESVQQF VFM+SQVDLAREA+HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE GE 
Sbjct: 355 ESVQQFGVFMLSQVDLAREASHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEHGES 414

Query: 419 VSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLF 478
           V+RYVD ++GHE +K+ LAHIGTHALLKMLLVDNFIHADMHPGNILVR   KK+S   LF
Sbjct: 415 VARYVDGMEGHEWIKTRLAHIGTHALLKMLLVDNFIHADMHPGNILVR---KKASGGGLF 471

Query: 479 RS-KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAF 537
           ++ KPH++FLDVGMTAELSK DR NL++FFKAVARRDGRTAAE TL+LS++QNCPNP+AF
Sbjct: 472 KTKKPHIVFLDVGMTAELSKNDRENLLDFFKAVARRDGRTAAERTLKLSRKQNCPNPEAF 531

Query: 538 IEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKL 597
           IEEV+EAF FWGTPEGDLVHPA+CM +LLEKVRRHRVN+DGNVCTVMVTTLVLEGWQRKL
Sbjct: 532 IEEVEEAFKFWGTPEGDLVHPADCMHELLEKVRRHRVNIDGNVCTVMVTTLVLEGWQRKL 591

Query: 598 DPGYNVMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           DPGY+VM TLQT++LK DWAKSLSYT+DGLMAP
Sbjct: 592 DPGYDVMHTLQTMVLKTDWAKSLSYTVDGLMAP 624


>gi|42561917|ref|NP_172606.3| aarF domain-containing kinase [Arabidopsis thaliana]
 gi|332190608|gb|AEE28729.1| aarF domain-containing kinase [Arabidopsis thaliana]
          Length = 624

 Score =  895 bits (2314), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/633 (68%), Positives = 519/633 (81%), Gaps = 12/633 (1%)

Query: 1   MSRVLTFRNIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYG-FPSGGHCS 59
           MSRVL  + + +  QS+++N++   S+   Y       LR P  R YS  G  PS  +C+
Sbjct: 1   MSRVLISKIVGKQTQSLVSNQKDRVSQWGSYRTAFTAALRSPQLRTYSSSGRIPSNVYCT 60

Query: 60  VPVYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAF 119
               ++K     +   RS + A A +V +H AQIAW+RL Y  S R      IS IAQAF
Sbjct: 61  FAFRDLKGSFLSNHLSRSYTTAPARNVVSHHAQIAWRRLHYKYSER------ISTIAQAF 114

Query: 120 SLALTRSPLLVPGIIAFTSGQLAWAQRV-SAETEYFPSQNAFYTRAQDGHAFVTSVLYSL 178
           SL+LTRS LL+PGI+A T GQ+AWAQR   +   ++ S  + YTRA++G  F++S+L+S+
Sbjct: 115 SLSLTRSHLLIPGIVAVTCGQVAWAQRAPGSGINHYASDKSLYTRAKNGPIFLSSLLFSV 174

Query: 179 VECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWA 238
           +E  IL+ RA Y+  LF+P+I+M    +S GP+FR++WL +V RTLE AGPAFIKWGQWA
Sbjct: 175 IEGFILIGRAFYIACLFTPTILMGLVVESCGPRFRKIWLEMVHRTLERAGPAFIKWGQWA 234

Query: 239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIA 298
           ATRPDLFP+DLC +LS+LHS APEHSFAYTKKTIE+AFGR+LSEIF+ F+E PVASGSIA
Sbjct: 235 ATRPDLFPKDLCSQLSKLHSNAPEHSFAYTKKTIEKAFGRKLSEIFEEFDEVPVASGSIA 294

Query: 299 QVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLD 358
           QVHRASLRF+YPGQK K  +VAVKVRHPGVGESIRRDFVIINL AKIS++IPA+KWLRLD
Sbjct: 295 QVHRASLRFQYPGQKSKSSLVAVKVRHPGVGESIRRDFVIINLVAKISTLIPALKWLRLD 354

Query: 359 ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGEC 418
           ESVQQF VFM+SQVDLAREA+HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE GE 
Sbjct: 355 ESVQQFGVFMLSQVDLAREASHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEHGES 414

Query: 419 VSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLF 478
           V+RYVD ++GHE +K+ LAHIGTHALLKMLLVDNFIHADMHPGNILVR   KK+S+  LF
Sbjct: 415 VARYVDGMEGHEWIKTRLAHIGTHALLKMLLVDNFIHADMHPGNILVR---KKASRGGLF 471

Query: 479 RS-KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAF 537
           ++ KPH++FLDVGMTAEL+K DR NL++FFKAVARRDGRTAAE TL+LS++QNCPNP+AF
Sbjct: 472 KTKKPHIVFLDVGMTAELAKNDRENLLDFFKAVARRDGRTAAERTLKLSRKQNCPNPEAF 531

Query: 538 IEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKL 597
           IEEV+EAF FWGTPEGDLVHPA+CM +LLEKVRRHRVN+DGNVCTVMVTTLVLEGWQRKL
Sbjct: 532 IEEVEEAFKFWGTPEGDLVHPADCMHELLEKVRRHRVNIDGNVCTVMVTTLVLEGWQRKL 591

Query: 598 DPGYNVMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           DPGY+VM TLQT++LK DWAKSLSYT+DGLMAP
Sbjct: 592 DPGYDVMHTLQTMVLKTDWAKSLSYTVDGLMAP 624


>gi|357475969|ref|XP_003608270.1| aarF domain-containing protein kinase, putative [Medicago
           truncatula]
 gi|87240485|gb|ABD32343.1| Protein kinase-like [Medicago truncatula]
 gi|355509325|gb|AES90467.1| aarF domain-containing protein kinase, putative [Medicago
           truncatula]
          Length = 630

 Score =  890 bits (2299), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/638 (67%), Positives = 512/638 (80%), Gaps = 16/638 (2%)

Query: 1   MSRVLTFRNIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSV 60
           M +     +I RAA+S+L   +  +  +++   +++V   +   R Y  Y FP+ G  S+
Sbjct: 1   MDKFFMLGHIGRAAESILRIHKSRYLGVSRNAGLLSVAPNINRCRTYMQYKFPNEGCSSI 60

Query: 61  PVYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPC--------I 112
                ++   + CS  + +  SA ++  H+++IAWK L        +I+P         +
Sbjct: 61  MWRGARENFHKGCSFWNFTAFSAKNITAHKSRIAWKLL-------RKIYPSNGYSGSTSV 113

Query: 113 SRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVT 172
             IAQA SLAL RS  LVP I AF  G+LA AQ+  ++   +PS NA    AQDG++++ 
Sbjct: 114 HMIAQAVSLALARSCFLVPSIFAFACGELALAQQNQSDAGSYPSPNALCMSAQDGYSYMF 173

Query: 173 SVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFI 232
           +  + +VE ++LL RA+YL +LFSPSI+MAP AD FGP+FR++WL VV RTLE AGPAFI
Sbjct: 174 AFAFVVVEGLVLLGRAIYLAILFSPSILMAPLADYFGPEFRKMWLRVVHRTLERAGPAFI 233

Query: 233 KWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPV 292
           KWGQWAATRPDLFP+D+C KL+ELHSKAPEHSF+YTKKTIE AFGR++SEIF+ FEE PV
Sbjct: 234 KWGQWAATRPDLFPQDICTKLAELHSKAPEHSFSYTKKTIESAFGRKISEIFENFEELPV 293

Query: 293 ASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAV 352
           ASGSIAQVHRASL++RYPGQ+ KP++VAVKVRHPGVGESIRRDF IIN  AK S  IPA+
Sbjct: 294 ASGSIAQVHRASLKYRYPGQQAKPMLVAVKVRHPGVGESIRRDFAIINFVAKSSKFIPAL 353

Query: 353 KWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVET 412
            WLRLDESVQQFAVFMMSQVDLAREAAHL+RFIYNFR+W+DVSFPKPVYPLVHPAVLVET
Sbjct: 354 NWLRLDESVQQFAVFMMSQVDLAREAAHLNRFIYNFRQWRDVSFPKPVYPLVHPAVLVET 413

Query: 413 YEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKS 472
           YE GE VS YVDELQGHE +KSALAHIG++ALLKMLLVDNFIHADMHPGNILVRV Q K 
Sbjct: 414 YENGESVSHYVDELQGHEGIKSALAHIGSNALLKMLLVDNFIHADMHPGNILVRVPQSK- 472

Query: 473 SQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCP 532
           ++K  F+SKPHVIFLDVGMTAELS +DRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCP
Sbjct: 473 ARKPFFKSKPHVIFLDVGMTAELSGSDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCP 532

Query: 533 NPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEG 592
           +PKA+IEEV++AF FWGT EGD VHPAECM+QLLEKVRRHRVN+DGNVCTVMVTTLVLEG
Sbjct: 533 DPKAYIEEVEKAFTFWGTREGDAVHPAECMEQLLEKVRRHRVNIDGNVCTVMVTTLVLEG 592

Query: 593 WQRKLDPGYNVMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           WQRKLDPGYNVM+TLQTLLL+ADWAKS +YTI  LMAP
Sbjct: 593 WQRKLDPGYNVMETLQTLLLRADWAKSFAYTIQSLMAP 630


>gi|356521287|ref|XP_003529288.1| PREDICTED: probable serine/threonine-protein kinase abkC-like
           [Glycine max]
          Length = 513

 Score =  879 bits (2271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/516 (80%), Positives = 465/516 (90%), Gaps = 4/516 (0%)

Query: 115 IAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSV 174
           IAQA SLALTRS LLVPG +AF SG+LA AQ   A+TE++PSQNA Y  AQDG+ ++ + 
Sbjct: 2   IAQAVSLALTRSYLLVPGFLAFASGKLALAQPNGADTEFYPSQNALYMHAQDGYGYMFAF 61

Query: 175 LYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKW 234
           ++ +VE ++LL RA+YL +LFSPSI+MAP AD FGP+FR++WL VV  TLE AGPAFIKW
Sbjct: 62  VFIVVESLVLLARAIYLAILFSPSILMAPLADYFGPEFRKMWLSVVHCTLEKAGPAFIKW 121

Query: 235 GQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVAS 294
           GQWAATRPDLFP+DLC KL+EL +KAP+HSF+YTKKTIERAFGR++SEIF+ FEE PVAS
Sbjct: 122 GQWAATRPDLFPQDLCTKLAELQTKAPQHSFSYTKKTIERAFGRKISEIFENFEEVPVAS 181

Query: 295 GSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKW 354
           GSIAQVHRASL++RYPGQ+ KP+VVAVKVRHPGVGESIRRDF IINL AK S  I A+ W
Sbjct: 182 GSIAQVHRASLKYRYPGQQAKPLVVAVKVRHPGVGESIRRDFAIINLVAKSSKFIHALNW 241

Query: 355 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE 414
           LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRR +DVSFPKPVYPLVHPAVLVETYE
Sbjct: 242 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRSRDVSFPKPVYPLVHPAVLVETYE 301

Query: 415 QGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ 474
            GE VS YVDELQGHER+KSALAHIGT+ALLKMLLVDNFIHADMHPGNILVR        
Sbjct: 302 NGESVSHYVDELQGHERIKSALAHIGTNALLKMLLVDNFIHADMHPGNILVR----NKPH 357

Query: 475 KRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNP 534
           KRLF+SKPHVIFLDVGMTAELS +DRVNL+EFFKAVA RDGRTAAECTL+LSKQQNCPNP
Sbjct: 358 KRLFKSKPHVIFLDVGMTAELSGSDRVNLLEFFKAVAHRDGRTAAECTLKLSKQQNCPNP 417

Query: 535 KAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQ 594
           KAF+EE++EAF FWGTPEGDLVHPAECM+QLLEKVRRH+VNVDGNVCTV+VTTLVLEGWQ
Sbjct: 418 KAFVEEMEEAFTFWGTPEGDLVHPAECMEQLLEKVRRHKVNVDGNVCTVLVTTLVLEGWQ 477

Query: 595 RKLDPGYNVMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           RKLDPGY+VM+TLQTLLL+ADWAKSLSYTIDGLMAP
Sbjct: 478 RKLDPGYDVMNTLQTLLLRADWAKSLSYTIDGLMAP 513


>gi|297603504|ref|NP_001054142.2| Os04g0660200 [Oryza sativa Japonica Group]
 gi|215767701|dbj|BAG99929.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255675853|dbj|BAF16056.2| Os04g0660200 [Oryza sativa Japonica Group]
          Length = 629

 Score =  877 bits (2265), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/630 (67%), Positives = 496/630 (78%), Gaps = 2/630 (0%)

Query: 1   MSRVLTFRNIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSV 60
           MSR +      +    VL N +         G+  A GL     R   H   P G   S 
Sbjct: 2   MSRFMQIGKSRKLVHDVLVNSKPNSFTAHNIGSNFAFGL-AHTGRACLHGKVPHGPGTSS 60

Query: 61  PVYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFS 120
            +   K+ L R+ + R+ SV S  S      Q+AWK+L    S   +  P +SR+A A S
Sbjct: 61  MLGRAKESLYRNPAARNFSVLSTCSQNAFHGQLAWKQLMTIGSHVPKASPILSRVACAIS 120

Query: 121 LALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVE 180
           LA TRS L VP + AF +G++  AQ+ SA+ EY P +++ YTRAQDG  +VTS+++S VE
Sbjct: 121 LAATRSNL-VPYLFAFVAGEIMLAQKTSADGEYLPIRDSLYTRAQDGRIYVTSLIFSAVE 179

Query: 181 CVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAAT 240
            VI++ R++YL +LF+PSI+MAPFAD+ G ++R+ WL +V RTLE AGPAFIKWGQWAAT
Sbjct: 180 LVIIIFRSIYLALLFTPSILMAPFADTLGSKYRKTWLRLVHRTLEKAGPAFIKWGQWAAT 239

Query: 241 RPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQV 300
           RPDLF  DLC +LS+LH+KAP HSFAYTKKT+E+AFGR+LS++F+ FEE PVASGS+AQV
Sbjct: 240 RPDLFESDLCAELSKLHTKAPAHSFAYTKKTVEKAFGRKLSDLFENFEEEPVASGSVAQV 299

Query: 301 HRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDES 360
           HRA LRFRYPGQ +K + VAVKVRHPGVGESIRRDF IIN  AKIS  IP + WLRLDES
Sbjct: 300 HRAGLRFRYPGQHIKRVTVAVKVRHPGVGESIRRDFTIINAVAKISRYIPTLNWLRLDES 359

Query: 361 VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS 420
           VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP+YPLVHPAVLVETYEQGE V+
Sbjct: 360 VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPLYPLVHPAVLVETYEQGESVA 419

Query: 421 RYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRS 480
            YVD+L GH+R+KSALAHIGTHALLKMLLVDNF+HADMHPGNILVRV Q ++S   L +S
Sbjct: 420 HYVDDLDGHDRIKSALAHIGTHALLKMLLVDNFVHADMHPGNILVRVIQPRNSNNTLLKS 479

Query: 481 KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEE 540
           +PHV+FLDVGMTAELS  DRVNL+EFFKAVARRDGRTAAE TLRLSKQQNCPNPKAFIEE
Sbjct: 480 RPHVVFLDVGMTAELSSNDRVNLLEFFKAVARRDGRTAAERTLRLSKQQNCPNPKAFIEE 539

Query: 541 VDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPG 600
           V+ +F+FWGT EGD VHPAECM QLLE+VRRH+VN+DGNVCTVMVTTLVLEGWQRKLDP 
Sbjct: 540 VERSFSFWGTSEGDAVHPAECMHQLLEQVRRHKVNIDGNVCTVMVTTLVLEGWQRKLDPD 599

Query: 601 YNVMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           YNVM TLQTLL K DWAKSL YTI+GLMAP
Sbjct: 600 YNVMKTLQTLLFKEDWAKSLQYTIEGLMAP 629


>gi|32488318|emb|CAE02895.1| OSJNBa0015K02.12 [Oryza sativa Japonica Group]
          Length = 694

 Score =  874 bits (2258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/629 (67%), Positives = 495/629 (78%), Gaps = 2/629 (0%)

Query: 2   SRVLTFRNIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVP 61
           SR +      +    VL N +         G+  A GL     R   H   P G   S  
Sbjct: 68  SRFMQIGKSRKLVHDVLVNSKPNSFTAHNIGSNFAFGL-AHTGRACLHGKVPHGPGTSSM 126

Query: 62  VYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSL 121
           +   K+ L R+ + R+ SV S  S      Q+AWK+L    S   +  P +SR+A A SL
Sbjct: 127 LGRAKESLYRNPAARNFSVLSTCSQNAFHGQLAWKQLMTIGSHVPKASPILSRVACAISL 186

Query: 122 ALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVEC 181
           A TRS L VP + AF +G++  AQ+ SA+ EY P +++ YTRAQDG  +VTS+++S VE 
Sbjct: 187 AATRSNL-VPYLFAFVAGEIMLAQKTSADGEYLPIRDSLYTRAQDGRIYVTSLIFSAVEL 245

Query: 182 VILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATR 241
           VI++ R++YL +LF+PSI+MAPFAD+ G ++R+ WL +V RTLE AGPAFIKWGQWAATR
Sbjct: 246 VIIIFRSIYLALLFTPSILMAPFADTLGSKYRKTWLRLVHRTLEKAGPAFIKWGQWAATR 305

Query: 242 PDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVH 301
           PDLF  DLC +LS+LH+KAP HSFAYTKKT+E+AFGR+LS++F+ FEE PVASGS+AQVH
Sbjct: 306 PDLFESDLCAELSKLHTKAPAHSFAYTKKTVEKAFGRKLSDLFENFEEEPVASGSVAQVH 365

Query: 302 RASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESV 361
           RA LRFRYPGQ +K + VAVKVRHPGVGESIRRDF IIN  AKIS  IP + WLRLDESV
Sbjct: 366 RAGLRFRYPGQHIKRVTVAVKVRHPGVGESIRRDFTIINAVAKISRYIPTLNWLRLDESV 425

Query: 362 QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSR 421
           QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP+YPLVHPAVLVETYEQGE V+ 
Sbjct: 426 QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPLYPLVHPAVLVETYEQGESVAH 485

Query: 422 YVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSK 481
           YVD+L GH+R+KSALAHIGTHALLKMLLVDNF+HADMHPGNILVRV Q ++S   L +S+
Sbjct: 486 YVDDLDGHDRIKSALAHIGTHALLKMLLVDNFVHADMHPGNILVRVIQPRNSNNTLLKSR 545

Query: 482 PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEV 541
           PHV+FLDVGMTAELS  DRVNL+EFFKAVARRDGRTAAE TLRLSKQQNCPNPKAFIEEV
Sbjct: 546 PHVVFLDVGMTAELSSNDRVNLLEFFKAVARRDGRTAAERTLRLSKQQNCPNPKAFIEEV 605

Query: 542 DEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGY 601
           + +F+FWGT EGD VHPAECM QLLE+VRRH+VN+DGNVCTVMVTTLVLEGWQRKLDP Y
Sbjct: 606 ERSFSFWGTSEGDAVHPAECMHQLLEQVRRHKVNIDGNVCTVMVTTLVLEGWQRKLDPDY 665

Query: 602 NVMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           NVM TLQTLL K DWAKSL YTI+GLMAP
Sbjct: 666 NVMKTLQTLLFKEDWAKSLQYTIEGLMAP 694


>gi|19387282|gb|AAL87193.1|AF480497_21 putative 62.8 kDa protein [Oryza sativa Japonica Group]
 gi|125591935|gb|EAZ32285.1| hypothetical protein OsJ_16491 [Oryza sativa Japonica Group]
          Length = 694

 Score =  874 bits (2258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/629 (67%), Positives = 495/629 (78%), Gaps = 2/629 (0%)

Query: 2   SRVLTFRNIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVP 61
           SR +      +    VL N +         G+  A GL     R   H   P G   S  
Sbjct: 68  SRFMQIGKSRKLVHDVLVNSKPNSFTAHNIGSNFAFGL-AHTGRACLHGKVPHGPGTSSM 126

Query: 62  VYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSL 121
           +   K+ L R+ + R+ SV S  S      Q+AWK+L    S   +  P +SR+A A SL
Sbjct: 127 LGRAKESLYRNPAARNFSVLSTCSQNAFHGQLAWKQLMTIGSHVPKASPILSRVACAISL 186

Query: 122 ALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVEC 181
           A TRS L VP + AF +G++  AQ+ SA+ EY P +++ YTRAQDG  +VTS+++S VE 
Sbjct: 187 AATRSNL-VPYLFAFVAGEIMLAQKTSADGEYLPIRDSLYTRAQDGRIYVTSLIFSAVEL 245

Query: 182 VILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATR 241
           VI++ R++YL +LF+PSI+MAPFAD+ G ++R+ WL +V RTLE AGPAFIKWGQWAATR
Sbjct: 246 VIIIFRSIYLALLFTPSILMAPFADTLGSKYRKTWLRLVHRTLEKAGPAFIKWGQWAATR 305

Query: 242 PDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVH 301
           PDLF  DLC +LS+LH+KAP HSFAYTKKT+E+AFGR+LS++F+ FEE PVASGS+AQVH
Sbjct: 306 PDLFESDLCAELSKLHTKAPAHSFAYTKKTVEKAFGRKLSDLFENFEEEPVASGSVAQVH 365

Query: 302 RASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESV 361
           RA LRFRYPGQ +K + VAVKVRHPGVGESIRRDF IIN  AKIS  IP + WLRLDESV
Sbjct: 366 RAGLRFRYPGQHIKRVTVAVKVRHPGVGESIRRDFTIINAVAKISRYIPTLNWLRLDESV 425

Query: 362 QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSR 421
           QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP+YPLVHPAVLVETYEQGE V+ 
Sbjct: 426 QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPLYPLVHPAVLVETYEQGESVAH 485

Query: 422 YVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSK 481
           YVD+L GH+R+KSALAHIGTHALLKMLLVDNF+HADMHPGNILVRV Q ++S   L +S+
Sbjct: 486 YVDDLDGHDRIKSALAHIGTHALLKMLLVDNFVHADMHPGNILVRVIQPRNSNNTLLKSR 545

Query: 482 PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEV 541
           PHV+FLDVGMTAELS  DRVNL+EFFKAVARRDGRTAAE TLRLSKQQNCPNPKAFIEEV
Sbjct: 546 PHVVFLDVGMTAELSSNDRVNLLEFFKAVARRDGRTAAERTLRLSKQQNCPNPKAFIEEV 605

Query: 542 DEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGY 601
           + +F+FWGT EGD VHPAECM QLLE+VRRH+VN+DGNVCTVMVTTLVLEGWQRKLDP Y
Sbjct: 606 ERSFSFWGTSEGDAVHPAECMHQLLEQVRRHKVNIDGNVCTVMVTTLVLEGWQRKLDPDY 665

Query: 602 NVMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           NVM TLQTLL K DWAKSL YTI+GLMAP
Sbjct: 666 NVMKTLQTLLFKEDWAKSLQYTIEGLMAP 694


>gi|116310034|emb|CAH67057.1| H0112G12.2 [Oryza sativa Indica Group]
 gi|125550082|gb|EAY95904.1| hypothetical protein OsI_17767 [Oryza sativa Indica Group]
          Length = 694

 Score =  872 bits (2254), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/629 (67%), Positives = 494/629 (78%), Gaps = 2/629 (0%)

Query: 2   SRVLTFRNIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVP 61
           SR +      +    VL N +         G+  A GL     R   H   P G   S  
Sbjct: 68  SRFMQIGKSRKLVHDVLVNSKPNSFTAQNIGSNFAFGL-AHTGRACLHRKVPHGPGTSSM 126

Query: 62  VYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSL 121
           +   K+ L R+ + R+ SV S  S      Q+AWK+L    S   +  P +SR+A A SL
Sbjct: 127 LGRAKESLYRNPAARNFSVLSTCSQNAFHGQLAWKQLMTIGSHVPKASPILSRVACAISL 186

Query: 122 ALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVEC 181
           A TRS L VP + AF +G++  AQ+ SA+ EY P +++ YTRAQDG  +VTS+++S VE 
Sbjct: 187 AATRSNL-VPYLFAFVAGEIMLAQKTSADGEYLPIRDSLYTRAQDGRIYVTSLIFSAVEL 245

Query: 182 VILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATR 241
           VI++ R++YL +LF+PSI+MAPFAD+ G ++R+ WL +V RTLE AGPAFIKWGQWAATR
Sbjct: 246 VIIIFRSIYLALLFTPSILMAPFADTLGSKYRKTWLRLVHRTLEKAGPAFIKWGQWAATR 305

Query: 242 PDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVH 301
           PDLF  DLC +LS+LH+KAP HSFAYTKKT+E+AFGR+LS++F+ FEE PVASGS+AQVH
Sbjct: 306 PDLFESDLCAELSKLHTKAPAHSFAYTKKTVEKAFGRKLSDLFENFEEEPVASGSVAQVH 365

Query: 302 RASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESV 361
           RA LRFRYPGQ +K + VAVKVRHPGVGESIRRDF IIN  AKIS  IP + WLRLDESV
Sbjct: 366 RAGLRFRYPGQHIKRVTVAVKVRHPGVGESIRRDFTIINAVAKISRYIPTLNWLRLDESV 425

Query: 362 QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSR 421
           QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP+YPLVHPAVLVETYE GE V+ 
Sbjct: 426 QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPLYPLVHPAVLVETYEHGESVAH 485

Query: 422 YVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSK 481
           YVD+L GH+R+KSALAHIGTHALLKMLLVDNF+HADMHPGNILVRV Q ++S   L +S+
Sbjct: 486 YVDDLDGHDRIKSALAHIGTHALLKMLLVDNFVHADMHPGNILVRVIQPRNSNNTLLKSR 545

Query: 482 PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEV 541
           PHV+FLDVGMTAELS  DRVNL+EFFKAVARRDGRTAAE TLRLSKQQNCPNPKAFIEEV
Sbjct: 546 PHVVFLDVGMTAELSSNDRVNLLEFFKAVARRDGRTAAERTLRLSKQQNCPNPKAFIEEV 605

Query: 542 DEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGY 601
           + +F+FWGT EGD VHPAECM QLLE+VRRH+VN+DGNVCTVMVTTLVLEGWQRKLDP Y
Sbjct: 606 ERSFSFWGTSEGDAVHPAECMHQLLEQVRRHKVNIDGNVCTVMVTTLVLEGWQRKLDPDY 665

Query: 602 NVMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           NVM TLQTLL K DWAKSL YTI+GLMAP
Sbjct: 666 NVMKTLQTLLFKEDWAKSLQYTIEGLMAP 694


>gi|357162484|ref|XP_003579427.1| PREDICTED: probable serine/threonine-protein kinase abkC-like
           [Brachypodium distachyon]
          Length = 699

 Score =  854 bits (2206), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/619 (67%), Positives = 490/619 (79%), Gaps = 2/619 (0%)

Query: 12  RAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQLLCR 71
           + A + L N +   S     G   A GL     R + H    +G   S  +   K+ L  
Sbjct: 83  KLAHAALANSKPRVSGTQNIGPSYASGLAY-RSRAFLHGTVHNGPSTSFVLGRAKESLYW 141

Query: 72  SCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLALTRSPLLVP 131
           S   R+LSV S+ S     +Q+AWK+L    S   +  P +SR A A +LA TRS + VP
Sbjct: 142 SPGARNLSVLSSCSRNAFHSQLAWKQLTAMGSRAPRASPLLSRAACAITLAATRSKV-VP 200

Query: 132 GIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYL 191
            ++AF +G++  A++ SAE EY P ++  Y RAQD   +VTS+++S VE VI++ R++YL
Sbjct: 201 YLVAFIAGEIMLAEKTSAEGEYLPIRDNIYMRAQDSRIYVTSLIFSAVEMVIIIFRSIYL 260

Query: 192 GVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCK 251
            +LF+PS++MAPFAD+ G ++R+ WL +V RTLE AGPAFIKWGQWAATRPDLF  DLC 
Sbjct: 261 AMLFTPSVLMAPFADNLGSKYRKTWLRLVHRTLEKAGPAFIKWGQWAATRPDLFANDLCT 320

Query: 252 KLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPG 311
           +LS+LH+KAP HSFAYTKKT+E+AFGR+LS+IF+ FEE PVASGS+AQVHRASLRFR+PG
Sbjct: 321 ELSKLHTKAPAHSFAYTKKTVEKAFGRKLSDIFENFEEEPVASGSVAQVHRASLRFRHPG 380

Query: 312 QKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQ 371
           +K K   VAVKVRHPGVG+SIRRDF IIN  AKIS  IPA+ WLRLDESVQQFAVFMMSQ
Sbjct: 381 KKTKRETVAVKVRHPGVGDSIRRDFSIINTVAKISRYIPALNWLRLDESVQQFAVFMMSQ 440

Query: 372 VDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHER 431
           VDLAREAAHLSRFIYNFR WKDVSFP P+YPLVHPAVLVE+YE GE VS YVD+  GHER
Sbjct: 441 VDLAREAAHLSRFIYNFRMWKDVSFPTPLYPLVHPAVLVESYEHGESVSHYVDDHDGHER 500

Query: 432 LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGM 491
           +KSALAHIGTHALLKMLLVDNF+HADMHPGNILVRV Q K+S   L +S+PHV+FLDVGM
Sbjct: 501 IKSALAHIGTHALLKMLLVDNFVHADMHPGNILVRVVQPKNSNNTLLKSRPHVVFLDVGM 560

Query: 492 TAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTP 551
           TAELS  DRVNL+EFFKAVARRDGRTAAE TL+LSKQQNCPNPK FIEEV+ AF+FWGTP
Sbjct: 561 TAELSSNDRVNLLEFFKAVARRDGRTAAESTLKLSKQQNCPNPKVFIEEVERAFSFWGTP 620

Query: 552 EGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           EGD++HPA+CM QLLE+VRRH+VN+DGNVCTVMVTTLVLEGWQRKLDP YNVM TLQTLL
Sbjct: 621 EGDVIHPADCMHQLLEQVRRHKVNIDGNVCTVMVTTLVLEGWQRKLDPDYNVMKTLQTLL 680

Query: 612 LKADWAKSLSYTIDGLMAP 630
            K DWAKSL YTI+GLMAP
Sbjct: 681 FKEDWAKSLQYTIEGLMAP 699


>gi|242077506|ref|XP_002448689.1| hypothetical protein SORBIDRAFT_06g031570 [Sorghum bicolor]
 gi|241939872|gb|EES13017.1| hypothetical protein SORBIDRAFT_06g031570 [Sorghum bicolor]
          Length = 625

 Score =  853 bits (2205), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/630 (65%), Positives = 494/630 (78%), Gaps = 6/630 (0%)

Query: 1   MSRVLTFRNIWRAAQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSV 60
           MSR        + AQ++L + +   +      +  A GL     R + H    +G   S 
Sbjct: 2   MSRFAHLGKSRKIAQALLVSSKPNTASGQNITSSFAFGLGYSS-RAFLHGRVYNGPSTSY 60

Query: 61  PVYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFS 120
            +    + L  S  VR  S+ S+ S    Q+Q+AWKRL    S   +  P +SR+A A  
Sbjct: 61  MLGRANESLHWSTGVRKFSILSSCSQNAFQSQLAWKRLVAMGSRAPKASPFLSRVACAIG 120

Query: 121 LALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVE 180
           LA++RS +  P ++AF +G++  AQ+ SA+ EY+P +     RAQDG  +VTS++YS VE
Sbjct: 121 LAVSRSNV-APYLVAFIAGEVMLAQKTSADGEYYPIRE----RAQDGRIYVTSLIYSAVE 175

Query: 181 CVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAAT 240
            VI++ R++YL +LF+PSI+MAPFA++ G ++R+ WL +V RTLE AGPAFIKWGQWAAT
Sbjct: 176 LVIIIFRSIYLALLFTPSILMAPFAETLGSKYRKTWLRLVHRTLELAGPAFIKWGQWAAT 235

Query: 241 RPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQV 300
           RPDLFP DLC +LS+LH+KAP HSF YTKKT+E+AFGR+LS+IF+ FEE PVASGS+AQV
Sbjct: 236 RPDLFPSDLCTELSKLHTKAPAHSFKYTKKTVEKAFGRKLSDIFENFEENPVASGSVAQV 295

Query: 301 HRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDES 360
           HRA LRFRYP Q+ K + VAVKVRHPGVG+SIRRDF IIN  AKIS  IP + WLRLDES
Sbjct: 296 HRAVLRFRYPNQQTKRVTVAVKVRHPGVGDSIRRDFNIINAVAKISRYIPTLNWLRLDES 355

Query: 361 VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS 420
           VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP+P+YPLVHPAVLVETYE GE VS
Sbjct: 356 VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPRPLYPLVHPAVLVETYEHGESVS 415

Query: 421 RYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRS 480
            YVD+L+GH+R+KSALAHIGTHALLKMLLVDNF+HADMHPGNILVRV Q K+S   L +S
Sbjct: 416 HYVDDLEGHDRIKSALAHIGTHALLKMLLVDNFVHADMHPGNILVRVVQPKNSNNTLIKS 475

Query: 481 KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEE 540
           +PHV+FLDVGMTAELS  DRVNL+EFFKAVARRDGRTAAE TL+LSKQQNCPNP AFIEE
Sbjct: 476 RPHVVFLDVGMTAELSSNDRVNLLEFFKAVARRDGRTAAESTLKLSKQQNCPNPSAFIEE 535

Query: 541 VDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPG 600
           V+ +F+FWGT EGD+VHPAECM QLLE+VRRH+VN+DGNVCTVMVTTLVLEGWQRKLDP 
Sbjct: 536 VERSFSFWGTAEGDVVHPAECMHQLLEQVRRHKVNIDGNVCTVMVTTLVLEGWQRKLDPD 595

Query: 601 YNVMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           YNVM TLQTLL K DWAKSL YTI GLMAP
Sbjct: 596 YNVMKTLQTLLFKEDWAKSLQYTIQGLMAP 625


>gi|226529878|ref|NP_001151610.1| protein kinase-like [Zea mays]
 gi|195648088|gb|ACG43512.1| protein kinase-like [Zea mays]
          Length = 625

 Score =  849 bits (2194), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/586 (69%), Positives = 476/586 (81%), Gaps = 5/586 (0%)

Query: 45  RFYSHYGFPSGGHCSVPVYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSF 104
           R + H    +G + S  +      L  S  VR  S+ S+ S    Q QIAWKRL    S 
Sbjct: 45  RTFLHGKVHNGPNTSYMLGRANDSLHWSTGVRKFSILSSCSQNAFQNQIAWKRLVALGSR 104

Query: 105 RDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRA 164
             +  P  S++A A  LA++RS +  P ++AF +G++  AQ+ SA+ EY+P +     RA
Sbjct: 105 APKASPIFSKVACAIGLAVSRSNI-TPYLVAFIAGEVMLAQKTSADGEYYPIRE----RA 159

Query: 165 QDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTL 224
           QDG  +VTS++YS VE VI++ R++YL +LF+PSI+MAPFA++ G ++R+ WL +V RTL
Sbjct: 160 QDGRIYVTSLIYSAVELVIIIFRSIYLALLFTPSILMAPFAETLGSKYRKTWLRLVHRTL 219

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E AGPAFIKWGQWAATRPDLFP DLC +LS+LH+KAP HSF YTKKT+E+AFGR+LS+IF
Sbjct: 220 ELAGPAFIKWGQWAATRPDLFPSDLCTELSKLHTKAPAHSFTYTKKTVEKAFGRKLSDIF 279

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
           + FEE PVASGS+AQVHRA LRFRYP ++ K + VAVKVRHPGVG+SIRRDF IIN  AK
Sbjct: 280 ENFEEDPVASGSVAQVHRAVLRFRYPNRQTKRVTVAVKVRHPGVGDSIRRDFNIINAVAK 339

Query: 345 ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV 404
           IS  IP + WLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP+P+YPLV
Sbjct: 340 ISRYIPTLNWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPRPLYPLV 399

Query: 405 HPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNIL 464
           HPAVLVETYE GE VS YVD+L+GH+R+KSALAHIGTHALLKMLLVDNF+HADMHPGNIL
Sbjct: 400 HPAVLVETYEHGESVSHYVDDLEGHDRIKSALAHIGTHALLKMLLVDNFVHADMHPGNIL 459

Query: 465 VRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR 524
           VRVAQ K+S   L +S+PHV+FLDVGMTAELS  DRVNL+EFFKAVARRDGRTAAE TL+
Sbjct: 460 VRVAQPKNSNNTLIKSRPHVVFLDVGMTAELSSNDRVNLLEFFKAVARRDGRTAAESTLK 519

Query: 525 LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVM 584
           LSKQQNCPNPKAFIEEV+ +F+FWGT EGD +HPAECM QLLE+VR H+VN+DGNVCTVM
Sbjct: 520 LSKQQNCPNPKAFIEEVERSFSFWGTAEGDAIHPAECMHQLLEQVRCHKVNIDGNVCTVM 579

Query: 585 VTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           VTTLVLEGWQRKLDP YNVM TLQTLL K DWAKSL YTI GLMAP
Sbjct: 580 VTTLVLEGWQRKLDPDYNVMKTLQTLLFKEDWAKSLQYTIQGLMAP 625


>gi|414584990|tpg|DAA35561.1| TPA: putative ABC1 and kinase-like domain family protein [Zea mays]
          Length = 625

 Score =  847 bits (2189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/586 (68%), Positives = 477/586 (81%), Gaps = 5/586 (0%)

Query: 45  RFYSHYGFPSGGHCSVPVYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSF 104
           R + H    +G + S  +      L  S  VR  S+ S+ S    Q+Q+AWKRL    S 
Sbjct: 45  RAFLHGKVHNGPNTSYMLGRANDSLHWSTGVRKFSILSSCSQNAFQSQLAWKRLVALGSR 104

Query: 105 RDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRA 164
             +  P  S++A A  LA++RS +  P ++AF +G++  AQ+ SA+ EY+P +     RA
Sbjct: 105 APKASPIFSKVACAIGLAVSRSNI-APYLVAFIAGEVMLAQKTSADGEYYPIRE----RA 159

Query: 165 QDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTL 224
           QDG  +VTS++YS VE VI++ R++YL +LF+PSI+MAPFA++ G ++R+ WL +V RTL
Sbjct: 160 QDGRIYVTSLIYSAVELVIIIFRSIYLALLFTPSILMAPFAETLGSKYRKTWLRLVHRTL 219

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E AGPAFIKWGQWAATRPDLFP DLC +LS+LH+KAP HSF YTKKT+E+AFGR+LS+IF
Sbjct: 220 ELAGPAFIKWGQWAATRPDLFPSDLCTELSKLHTKAPAHSFTYTKKTVEKAFGRKLSDIF 279

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
           + FEE PVASGS+AQVHRA LRFRYP ++ K + VAVKVRHPGVG+SIRRDF IIN  AK
Sbjct: 280 ENFEEDPVASGSVAQVHRAVLRFRYPNRQTKRVTVAVKVRHPGVGDSIRRDFNIINAVAK 339

Query: 345 ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV 404
           IS  IP + WLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP+P+YPLV
Sbjct: 340 ISRYIPTLNWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPRPLYPLV 399

Query: 405 HPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNIL 464
           HPAVLVETYE GE VS YVD+L+GH+R+KSALAHIGTHALLKMLLVDNF+HADMHPGNIL
Sbjct: 400 HPAVLVETYEHGESVSHYVDDLEGHDRIKSALAHIGTHALLKMLLVDNFVHADMHPGNIL 459

Query: 465 VRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR 524
           VRVAQ K+S   L +S+PHV+FLDVGMTAELS  DRVNL+EFFKAVARRDGRTAAE TL+
Sbjct: 460 VRVAQPKNSNNTLKKSRPHVVFLDVGMTAELSSNDRVNLLEFFKAVARRDGRTAAESTLK 519

Query: 525 LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVM 584
           LSKQQNCPNPKAFIEEV+ +F+FWGT EGD +HPAECM QLLE+VR H+VN+DGNVCTVM
Sbjct: 520 LSKQQNCPNPKAFIEEVERSFSFWGTAEGDAIHPAECMHQLLEQVRCHKVNIDGNVCTVM 579

Query: 585 VTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           VTTLVLEGWQRKLDP YNVM TLQTLL K DWAKSL YTI GLMAP
Sbjct: 580 VTTLVLEGWQRKLDPDYNVMKTLQTLLFKEDWAKSLQYTIQGLMAP 625


>gi|449479388|ref|XP_004155586.1| PREDICTED: probable serine/threonine-protein kinase abkC-like
           [Cucumis sativus]
          Length = 517

 Score =  831 bits (2146), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/499 (81%), Positives = 448/499 (89%), Gaps = 1/499 (0%)

Query: 132 GIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYL 191
            ++++   +LA AQR  A   ++PS N+FY RA+DGHA + S+L S +E +ILL+RALYL
Sbjct: 20  NMLSWFQKELA-AQRTFANAGHYPSPNSFYVRAEDGHAIMVSLLRSTLEVLILLLRALYL 78

Query: 192 GVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCK 251
            +LFSP I+MAPF D+FG  FR LWL VV R+LE  GPAFIKWGQWAATRPDLFPRDLC 
Sbjct: 79  AILFSPCILMAPFMDTFGYNFRRLWLRVVHRSLEKGGPAFIKWGQWAATRPDLFPRDLCT 138

Query: 252 KLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPG 311
           KLSELH+KAPEHSF+YTKKTIERAFGRRLSEIF+ FEEAPVASGSIAQVHRA L+FRYPG
Sbjct: 139 KLSELHTKAPEHSFSYTKKTIERAFGRRLSEIFEKFEEAPVASGSIAQVHRAYLKFRYPG 198

Query: 312 QKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQ 371
           Q+VKP++VAVKVRHPGVGESIRRDF+II+L AKIS  IP +KWLRLDESVQQFAVFMMSQ
Sbjct: 199 QQVKPMLVAVKVRHPGVGESIRRDFIIIDLVAKISKFIPTLKWLRLDESVQQFAVFMMSQ 258

Query: 372 VDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHER 431
           VDLAREAAHLSRFIYNFR+WKDVSFPKPVYPLVHPAVLVETYE GE VS YVDEL+G+ER
Sbjct: 259 VDLAREAAHLSRFIYNFRQWKDVSFPKPVYPLVHPAVLVETYEHGESVSHYVDELEGNER 318

Query: 432 LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGM 491
           LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRV   KS +KRLF SKPHV+FLDVGM
Sbjct: 319 LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVPHGKSRRKRLFNSKPHVVFLDVGM 378

Query: 492 TAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTP 551
           TAELS  DRVNL+EFFKAVARRDGR+ AECTLRLSKQQNCP+P+AFIEEV EAF+FW TP
Sbjct: 379 TAELSGNDRVNLLEFFKAVARRDGRSVAECTLRLSKQQNCPDPEAFIEEVTEAFSFWATP 438

Query: 552 EGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           E DLVHPAE MQQLLEKVRR+RVN+DGNVCTVMVTTLVLEGWQRKLDP YNVM TLQTLL
Sbjct: 439 EADLVHPAEAMQQLLEKVRRYRVNIDGNVCTVMVTTLVLEGWQRKLDPDYNVMRTLQTLL 498

Query: 612 LKADWAKSLSYTIDGLMAP 630
           LKADWAKSLSYTI+GLMAP
Sbjct: 499 LKADWAKSLSYTIEGLMAP 517


>gi|449433902|ref|XP_004134735.1| PREDICTED: probable serine/threonine-protein kinase abkC-like
           [Cucumis sativus]
          Length = 517

 Score =  830 bits (2145), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/499 (81%), Positives = 448/499 (89%), Gaps = 1/499 (0%)

Query: 132 GIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYL 191
            ++++   +LA AQR  A   ++PS N+FY RA+DGHA + S+L S +E +ILL+RALYL
Sbjct: 20  NMLSWFQKELA-AQRTFANAGHYPSPNSFYVRAEDGHAIMVSLLRSTLEVLILLLRALYL 78

Query: 192 GVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCK 251
            +LFSP I+MAPF D+FG  FR LWL VV R+LE  GPAFIKWGQWAATRPDLFPRDLC 
Sbjct: 79  AILFSPCILMAPFMDTFGYNFRRLWLRVVHRSLEKGGPAFIKWGQWAATRPDLFPRDLCT 138

Query: 252 KLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPG 311
           KLSELH+KAPEHSF+YTKKTIERAFGRRLSEIF+ FEEAPVASGSIAQVHRA L+FRYPG
Sbjct: 139 KLSELHTKAPEHSFSYTKKTIERAFGRRLSEIFEKFEEAPVASGSIAQVHRAYLKFRYPG 198

Query: 312 QKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQ 371
           Q+VKP++VAVKVRHPGVGESIRRDF+II+L AKIS  IP +KWLRLDESVQQFAVFMMSQ
Sbjct: 199 QQVKPMLVAVKVRHPGVGESIRRDFIIIDLVAKISKFIPTLKWLRLDESVQQFAVFMMSQ 258

Query: 372 VDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHER 431
           VDLAREAAHLSRFIYNFR+WKDVSFPKPVYPLVHPAVLVETYE GE VS YVDEL+G+ER
Sbjct: 259 VDLAREAAHLSRFIYNFRQWKDVSFPKPVYPLVHPAVLVETYEHGESVSHYVDELEGNER 318

Query: 432 LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGM 491
           LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRV   KS +KRLF SKPHV+FLDVGM
Sbjct: 319 LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVPHGKSRRKRLFNSKPHVVFLDVGM 378

Query: 492 TAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTP 551
           TAELS  DRVNL+EFFKAVARRDGR+ AECTLRLSKQQNCP+P+AFIEEV EAF+FW TP
Sbjct: 379 TAELSGNDRVNLLEFFKAVARRDGRSVAECTLRLSKQQNCPDPEAFIEEVTEAFSFWATP 438

Query: 552 EGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           E DLVHPAE MQQLLEKVRR+RVN+DGNVCTVMVTTLVLEGWQRKLDP YNVM TLQTLL
Sbjct: 439 EADLVHPAEAMQQLLEKVRRYRVNIDGNVCTVMVTTLVLEGWQRKLDPEYNVMRTLQTLL 498

Query: 612 LKADWAKSLSYTIDGLMAP 630
           LKADWAKSLSYTI+GLMAP
Sbjct: 499 LKADWAKSLSYTIEGLMAP 517


>gi|255567439|ref|XP_002524699.1| ATATH13, putative [Ricinus communis]
 gi|223536060|gb|EEF37718.1| ATATH13, putative [Ricinus communis]
          Length = 603

 Score =  828 bits (2140), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/633 (66%), Positives = 485/633 (76%), Gaps = 72/633 (11%)

Query: 5   LTFRNIWRAAQSVLTNERGYHSELTKYGAV-VAVGLRVPYYRFY--SHYGFPS-GGHCSV 60
           L F NI +  + ++ N+R     +TK G +   VGL +P YR+Y  + Y F S GG+ S 
Sbjct: 36  LMFGNIKKVGRLIILNQR----HITKCGTLDKTVGLHLPLYRYYDGARYWFSSKGGYSSF 91

Query: 61  PVYNVKQLLCRS--CSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQA 118
             Y VK+  CR    S R+ +V +AS+V T  AQ A+KRL    S   + FP ISRIAQA
Sbjct: 92  GSYGVKEHFCRKSYVSSRNYTVFAASNVVTRHAQHAFKRLCRKGSVSHRSFPHISRIAQA 151

Query: 119 FSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSL 178
            SLALTRS LLVPGI A + GQ+AWA+R  +E +++P QN+ Y RAQDGHA+VTS++ ++
Sbjct: 152 VSLALTRSHLLVPGIFAISYGQVAWAERTFSEMDFYPLQNSLYMRAQDGHAYVTSLVLAI 211

Query: 179 VECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWA 238
           VEC ILL+RALYL +LFSPS++MAPF D  GPQFR+ WL VV R                
Sbjct: 212 VECFILLVRALYLAILFSPSLIMAPFVDCCGPQFRKRWLQVVHR---------------- 255

Query: 239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIA 298
                                           T+E+A             E PVASGSIA
Sbjct: 256 --------------------------------TLEKA-------------EVPVASGSIA 270

Query: 299 QVHRASLRFRYPGQK-VKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRL 357
           QVHRASLRFRYPGQK VKP+VVAVKVRHPGVGESIRRDF IIN+ AK+S+ IP + WLRL
Sbjct: 271 QVHRASLRFRYPGQKQVKPMVVAVKVRHPGVGESIRRDFEIINMVAKLSNFIPTLNWLRL 330

Query: 358 DESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGE 417
           DESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGE
Sbjct: 331 DESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGE 390

Query: 418 CVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRL 477
            VS +VDEL+GH+R+KSALAHIGTHALLKMLLVDNFIHADMHPGNILVR++Q KSS+K +
Sbjct: 391 SVSHFVDELEGHDRIKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRMSQNKSSRKGI 450

Query: 478 FRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAF 537
           F+SKPHV+FLDVGMTAELS++DRVNL+EFFK+VARRDGRTAAEC LRLSKQQNCPNPKAF
Sbjct: 451 FKSKPHVVFLDVGMTAELSRSDRVNLLEFFKSVARRDGRTAAECALRLSKQQNCPNPKAF 510

Query: 538 IEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKL 597
           IEEV+EAF FWGTPEGDL+HPAECMQ+LLEKVRRH+VN+DGNVCTVMVTTLVLEGWQRKL
Sbjct: 511 IEEVEEAFTFWGTPEGDLIHPAECMQELLEKVRRHKVNIDGNVCTVMVTTLVLEGWQRKL 570

Query: 598 DPGYNVMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           DP YNVM TLQTLLL+ADWAKSLSYTIDGLMAP
Sbjct: 571 DPAYNVMQTLQTLLLRADWAKSLSYTIDGLMAP 603


>gi|356543148|ref|XP_003540025.1| PREDICTED: probable serine/threonine-protein kinase abkC-like
           [Glycine max]
          Length = 619

 Score =  802 bits (2071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/633 (61%), Positives = 483/633 (76%), Gaps = 17/633 (2%)

Query: 1   MSRVLTFRNIWRAAQSVLTNERGYHSELTKYGAV-VAVGLRVPY--YRFYSHYGFPSGGH 57
           MSR+L   NI R  +SV            K G + V   +  PY  Y F+SHY       
Sbjct: 1   MSRLLACGNIRRFTRSV-----------HKTGCLEVFYPMGSPYSRYNFFSHYRHVHKEQ 49

Query: 58  CSVPVYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQ 117
               ++  K     S   R+L    A++V  H  Q+ W R+ ++   +    P + +IA 
Sbjct: 50  FLFMLFKSKVNFLMSSRARNLYTLPANNVKYHHGQVVWNRMCFH---KGPALPPVGQIAH 106

Query: 118 AFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYS 177
             +LAL +S  +V G+IAF  G+ AW QR  AETE FP++++ Y  AQDG  ++T+ L +
Sbjct: 107 VVTLALVKSNFVVHGVIAFIIGEFAWTQRKWAETESFPTRDSLYVHAQDGRVYLTAALLA 166

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQW 237
           ++E  +L +RA+YL +LFSP I MAP  D FG QFR+ W+HVV  TLE AGPAFIKWGQW
Sbjct: 167 VIEIFVLFLRAVYLVILFSPCIAMAPLVDFFGTQFRKTWIHVVRVTLEKAGPAFIKWGQW 226

Query: 238 AATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSI 297
           AATRPDLFPRDLC +L+E  +KAP H F+Y++K IE AFG++LSEIF+ FEE P+ASGSI
Sbjct: 227 AATRPDLFPRDLCDELAEFQTKAPSHKFSYSRKCIENAFGQKLSEIFENFEEEPIASGSI 286

Query: 298 AQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRL 357
           AQVHRA+L++++PGQ++KP+VVAVKVRHPGV E+I+RDF++INL AKISS+ P +KWLRL
Sbjct: 287 AQVHRATLKYKFPGQRIKPVVVAVKVRHPGVSEAIKRDFILINLVAKISSLFPNLKWLRL 346

Query: 358 DESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGE 417
           DESVQQFAVFMMSQVDL+REAAHLSRFIYNFRRWKDVSFP P+YPLVHP+VLVET+EQGE
Sbjct: 347 DESVQQFAVFMMSQVDLSREAAHLSRFIYNFRRWKDVSFPMPLYPLVHPSVLVETFEQGE 406

Query: 418 CVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRL 477
            V  YVD+ +GHE  KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRV ++KS+   L
Sbjct: 407 SVLHYVDQPEGHEHFKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVGKRKSTPIPL 466

Query: 478 FRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAF 537
            +S+PHVIFLDVGMT ELSK +R  LVEFFKA+A +DGRTAAECTLRLSK+QNCP+PK F
Sbjct: 467 LKSRPHVIFLDVGMTTELSKRERGYLVEFFKAIALQDGRTAAECTLRLSKRQNCPDPKFF 526

Query: 538 IEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKL 597
           IEEVD++F FW +PEG+ VH A+ MQQLLE VRR +VN+DGNVC V+VTTLVLEGWQR+L
Sbjct: 527 IEEVDKSFEFWRSPEGESVHTADRMQQLLEHVRRCKVNIDGNVCAVIVTTLVLEGWQRRL 586

Query: 598 DPGYNVMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           DP Y+++  LQTLL KAD A+SLSY I+GL+AP
Sbjct: 587 DPEYDMLHALQTLLFKADLAQSLSYAIEGLVAP 619


>gi|297837289|ref|XP_002886526.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332367|gb|EFH62785.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 619

 Score =  799 bits (2063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/601 (66%), Positives = 483/601 (80%), Gaps = 13/601 (2%)

Query: 35  VAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQLLCRSCSV--RSLSVASASSVATHQAQ 92
           + V +R+P +R  S     +G H    ++NVK     +  V  RS S+ASAS+V    AQ
Sbjct: 27  IRVSVRLPQFRIQS-----NGYHTLGLLHNVKGRFLSNHHVARRSYSIASASNVVKQHAQ 81

Query: 93  IAWKRLFYYSSF-RDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVS-AE 150
           ++W RL    +  R    P IS+IAQAFSL+L RS LL+PG +A T  Q+A+AQRV+ + 
Sbjct: 82  VSWGRLLQRVTLNRSWNLPRISQIAQAFSLSLARSHLLLPGFLALTCRQVAYAQRVAPSP 141

Query: 151 TEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGP 210
             Y PS  + Y R+ +    ++S+L+S V+ V+L+ RALYL VLFSP+++MA    + GP
Sbjct: 142 VIYSPSHVSSYRRSINFPIIISSLLFSAVKGVVLIGRALYLAVLFSPNVIMALLGFACGP 201

Query: 211 QFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKK 270
           ++R+L   V+ RTLE AGPAFIK+GQW ATRPD F +DLC +LS+LHS APEHSFA+TKK
Sbjct: 202 RYRKLQYEVLHRTLERAGPAFIKFGQWIATRPDRFNKDLCLQLSKLHSNAPEHSFAFTKK 261

Query: 271 TIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGE 330
           +IE AFGR+LSEIF+ F+EAPVASGSIAQVHRASL+F+YPGQKVK   VAVKVRHP V E
Sbjct: 262 SIETAFGRKLSEIFEEFDEAPVASGSIAQVHRASLKFQYPGQKVKSSEVAVKVRHPCVEE 321

Query: 331 SIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRR 390
           +++RDFVIINL AK+++ IP + WLRLDE VQQF+V+M+SQVDL+REA+HLSRFIYNFR 
Sbjct: 322 TMKRDFVIINLVAKLTTFIPGLNWLRLDECVQQFSVYMLSQVDLSREASHLSRFIYNFRG 381

Query: 391 WKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLV 450
           WKDVSFPKP+YPL+HPAVLVETYE GE V+RYVD  +GHERLK+ +AHIGTHALLKMLLV
Sbjct: 382 WKDVSFPKPIYPLIHPAVLVETYEHGESVARYVDGSEGHERLKAKVAHIGTHALLKMLLV 441

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKRLFRS-KPHVIFLDVGMTAELSKTDRVNLVEFFKA 509
           DNFIHADMHPGNILVR     ++++ LFRS KPH++FLDVGMTAELSK DR NL+ FFKA
Sbjct: 442 DNFIHADMHPGNILVR---PNNTRRGLFRSRKPHIVFLDVGMTAELSKIDRDNLLGFFKA 498

Query: 510 VARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKV 569
           VARRDGRTAAE TL+LSKQQNCPNP+AFI+EV++AF FWGT EGDLVHPA+CM +L EK+
Sbjct: 499 VARRDGRTAAERTLKLSKQQNCPNPQAFIKEVEDAFTFWGTEEGDLVHPADCMHELFEKM 558

Query: 570 RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYTIDGLMA 629
           RRHRVN+DGNV TVM TTLVLEGWQRKLDPGY+VM TLQT+LLK DW KSLSYTIDGLMA
Sbjct: 559 RRHRVNIDGNVSTVMFTTLVLEGWQRKLDPGYDVMRTLQTMLLKTDWMKSLSYTIDGLMA 618

Query: 630 P 630
           P
Sbjct: 619 P 619


>gi|326490039|dbj|BAJ94093.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 785

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/627 (63%), Positives = 472/627 (75%), Gaps = 23/627 (3%)

Query: 1   MSRVLTFRNIWRA-AQSVLTNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCS 59
           MSR +      R  AQ+VL N +   S     G+  A GL     R   H G  +G   S
Sbjct: 127 MSRFMQLGKSGREIAQAVLANSKPGGSGAQSIGSSFAAGLAC-KSRALLHQGVHNGPGTS 185

Query: 60  VPVYNVKQLLCRSCSVRSLSV-------------------ASASSVATHQAQIAWKRLFY 100
             +   K+ L  S   R+ SV                   A  S V     Q AWK+L  
Sbjct: 186 HMLGRAKESLLWSPGARNFSVLSTCSRNAFRSQLAWKQLMAMGSRVPKASPQFAWKQLMS 245

Query: 101 YSSFRDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAF 160
             S   +  P +SR A A +L  TR  L VP ++AF +G+L   ++  A+ EY P +   
Sbjct: 246 TGSAVPKASPLLSRAACAVTLTATRYKL-VPYLLAFVAGELMLGEKSFADGEYLPIRENI 304

Query: 161 YTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVV 220
           Y+RAQD   +VT++++S VE VI+++R++YL  LF+PSI+MAPFAD+ G ++R+ WL +V
Sbjct: 305 YSRAQDSRIYVTTLIFSAVEMVIIILRSIYLAFLFTPSILMAPFADTLGSEYRKTWLRLV 364

Query: 221 LRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRL 280
            RTLE AGPAFIKWGQWAATRPDLF  DLC +LS+LH+KAP HS+AYTKKT+E+AFGR++
Sbjct: 365 HRTLEKAGPAFIKWGQWAATRPDLFANDLCTELSKLHTKAPAHSYAYTKKTVEKAFGRKI 424

Query: 281 SEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKV-KPIVVAVKVRHPGVGESIRRDFVII 339
           SEIF+ FEE PVASGS+AQVHRA+L+FR+PGQK  K I VAVKVRHPGVG+SIRRDF II
Sbjct: 425 SEIFENFEEEPVASGSVAQVHRAALKFRHPGQKTSKIITVAVKVRHPGVGDSIRRDFSII 484

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
           N AAK S  IPA+ WLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP
Sbjct: 485 NAAAKASRYIPALNWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 544

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
           +YPLVHPAVLVETYE GE VS YVD+  G ER+KSALAHIGTHALLKMLLVDNF+HADMH
Sbjct: 545 LYPLVHPAVLVETYELGESVSHYVDDHDGEERVKSALAHIGTHALLKMLLVDNFVHADMH 604

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGNILVR+AQ ++    L +S+PHV+FLDVGMTAELS  DRVNL+EFFKAVARRDGRTAA
Sbjct: 605 PGNILVRIAQPRNPNNTLLKSRPHVVFLDVGMTAELSSNDRVNLLEFFKAVARRDGRTAA 664

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           E TL+LSKQQNCPNPK FIEEV+ +F+FWGTPEGD++HPA+CM QLLE+VRRH+VN+DGN
Sbjct: 665 ESTLKLSKQQNCPNPKVFIEEVERSFSFWGTPEGDVIHPADCMHQLLEQVRRHKVNIDGN 724

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           VCTVMVTTLVLEGWQRKLDP YNVM+T
Sbjct: 725 VCTVMVTTLVLEGWQRKLDPDYNVMNT 751


>gi|148906359|gb|ABR16334.1| unknown [Picea sitchensis]
          Length = 657

 Score =  780 bits (2014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/562 (66%), Positives = 461/562 (82%), Gaps = 1/562 (0%)

Query: 69  LCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLALTRSPL 128
           LCR  + +  S+  AS   T+ AQ AW+RL     +    FP IS+IA+A SLA  RS L
Sbjct: 97  LCRPHNSKGFSMIPASVGMTYHAQTAWRRLSLLCCYGGPTFPAISKIARAVSLACVRSHL 156

Query: 129 LVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRA 188
             P I+A   G+ +WA    AE++         ++  + HA  TS ++S +E +IL++RA
Sbjct: 157 -TPRILAVIIGEASWAHNSWAESQELYPSVPLNSQVINRHAIFTSSIWSFLEGLILVIRA 215

Query: 189 LYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRD 248
           LYL  LF+P+I+MAP A  F  ++RE WL +V R+LE AG AFIKWGQWAATRPDLFPRD
Sbjct: 216 LYLITLFTPAIVMAPLASMFEGRYRERWLQLVHRSLEKAGAAFIKWGQWAATRPDLFPRD 275

Query: 249 LCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFR 308
           LCK+L++LH+KAP H F+YT+ TIE+AF RR+ EIF+ FEE PVASGSIAQVH+A+L+FR
Sbjct: 276 LCKELAKLHTKAPAHKFSYTQHTIEKAFSRRIDEIFEDFEEEPVASGSIAQVHKATLKFR 335

Query: 309 YPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368
           YPGQKVKP++VAVKVRHPGV E IRRDFVIIN  AK+SS +PA++WLRL+ESVQQFAVFM
Sbjct: 336 YPGQKVKPMIVAVKVRHPGVSEVIRRDFVIINWVAKLSSCLPALRWLRLEESVQQFAVFM 395

Query: 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG 428
           +SQVDL+REAAHL+RF+YNFRRWKDVSFPKP+YPLVHPAVLVETYEQGE V+RYVD+ +G
Sbjct: 396 LSQVDLSREAAHLNRFLYNFRRWKDVSFPKPLYPLVHPAVLVETYEQGESVARYVDQPEG 455

Query: 429 HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLD 488
           + R   +LAH GTH LLKMLLVDNFIHADMHPGNILVR+ Q  +S KRLF+S+PHV+FLD
Sbjct: 456 NYRFNRSLAHTGTHTLLKMLLVDNFIHADMHPGNILVRMGQSNASSKRLFQSRPHVVFLD 515

Query: 489 VGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFW 548
           VGMTAELSK DR+N++EFFKAVA+RDGRTAAECTL+ S+ Q+CP+P AFI+EV+ +F +W
Sbjct: 516 VGMTAELSKNDRLNILEFFKAVAQRDGRTAAECTLKFSRYQSCPDPNAFIQEVESSFKYW 575

Query: 549 GTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
           G+PEGD+VHPAECMQ+LLE VR H+VN+DGNVCTVMVTTLVLEGWQRKLDP +NVM+TL 
Sbjct: 576 GSPEGDVVHPAECMQELLEHVRHHKVNIDGNVCTVMVTTLVLEGWQRKLDPDFNVMNTLH 635

Query: 609 TLLLKADWAKSLSYTIDGLMAP 630
           T+L+++DWAKSLSYTI+ LMAP
Sbjct: 636 TVLIRSDWAKSLSYTIEELMAP 657


>gi|30696591|ref|NP_176358.2| aarF domain-containing kinase [Arabidopsis thaliana]
 gi|22655250|gb|AAM98215.1| unknown protein [Arabidopsis thaliana]
 gi|27311981|gb|AAO00956.1| unknown protein [Arabidopsis thaliana]
 gi|332195744|gb|AEE33865.1| aarF domain-containing kinase [Arabidopsis thaliana]
          Length = 621

 Score =  770 bits (1988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/603 (63%), Positives = 475/603 (78%), Gaps = 15/603 (2%)

Query: 35  VAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQLLCRS----CSVRSLSVASASSVATHQ 90
           + V +++P +R  S     +G H    ++NVK     S     + RS S+A AS+V    
Sbjct: 27  INVSVKLPQFRIQS-----NGYHTLGLLHNVKGRFLGSNHHQLARRSYSIAVASNVVKQH 81

Query: 91  AQIAWKRLFYYSSF-RDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSA 149
           AQ++W RL    +  R    P IS+IAQA SL+L RS  L+PG++A T  Q+A+AQRV  
Sbjct: 82  AQVSWGRLVQRVTLSRSWNLPRISQIAQACSLSLARSHFLLPGLLALTYRQVAYAQRVVP 141

Query: 150 E-TEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSF 208
               Y PS  + Y  + +    ++S+++S V+ V+L+ RALYL +LFSP+++MA    + 
Sbjct: 142 NPVVYSPSHISPYRSSINFPIVLSSLVFSAVKGVVLIGRALYLAILFSPNVIMALLGFAC 201

Query: 209 GPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYT 268
           GP++R+L   V+ RTLE AGPAFIK+GQW ATRPD F +DLC +LS+LHS APEHSFA+T
Sbjct: 202 GPRYRQLQYEVLHRTLEKAGPAFIKFGQWIATRPDRFNKDLCLQLSKLHSNAPEHSFAFT 261

Query: 269 KKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328
           KK+IE AFGR+LSEIF+ F+EAPVASGSIAQVHRASL+F+Y GQKVK   VAVKVRHP V
Sbjct: 262 KKSIENAFGRKLSEIFEEFDEAPVASGSIAQVHRASLKFQYAGQKVKSSEVAVKVRHPCV 321

Query: 329 GESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
            E+++RDFVIIN  A++++ IP + WLRLDE VQQF+V+M+SQVDL+REA+HLSRFIYNF
Sbjct: 322 EETMKRDFVIINFVARLTTFIPGLNWLRLDECVQQFSVYMLSQVDLSREASHLSRFIYNF 381

Query: 389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML 448
           R WKDVSFPKP+YPL+HPAVLVETYE GE V+RYVD  +G E+LK+ +AHIGT+ALLKML
Sbjct: 382 RGWKDVSFPKPIYPLIHPAVLVETYEHGESVARYVDGSEGQEKLKAKVAHIGTNALLKML 441

Query: 449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRS-KPHVIFLDVGMTAELSKTDRVNLVEFF 507
           LVDNFIHADMHPGNILVR     ++++ LFRS KPH++FLDVGMTAELSKTDR NL+ FF
Sbjct: 442 LVDNFIHADMHPGNILVR---PNNTRRGLFRSRKPHIVFLDVGMTAELSKTDRDNLLGFF 498

Query: 508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLE 567
           KAVARRDGRTAAE TL+LSKQQNCP+P+AFI+EV+EAF FWGT EGDLVHPA+CM +L E
Sbjct: 499 KAVARRDGRTAAERTLKLSKQQNCPDPQAFIKEVEEAFTFWGTEEGDLVHPADCMHELFE 558

Query: 568 KVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYTIDGL 627
           K+R HRVN+DGNV TVM TTLVLEGWQRKLDPGY+VM TLQT+LLK DW KSLSYTIDGL
Sbjct: 559 KMRSHRVNIDGNVSTVMFTTLVLEGWQRKLDPGYDVMRTLQTMLLKTDWMKSLSYTIDGL 618

Query: 628 MAP 630
           MAP
Sbjct: 619 MAP 621


>gi|356517298|ref|XP_003527325.1| PREDICTED: probable serine/threonine-protein kinase abkC-like
           [Glycine max]
          Length = 528

 Score =  762 bits (1967), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/522 (68%), Positives = 429/522 (82%), Gaps = 3/522 (0%)

Query: 109 FPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGH 168
            P I +IA+A SLA+ +S  +V G+I F  G+LAW Q   AE E FP++++ Y  AQDGH
Sbjct: 10  LPPIGQIARAVSLAMVKSNFVVHGVIVFIIGELAWTQGKWAEAESFPTRDSLYVHAQDGH 69

Query: 169 AFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAG 228
            ++T+ L + +E  IL +RA YL +LF P I MAP    FG QFR+ W+HVV  TLE AG
Sbjct: 70  VYLTAALLAAIEIFILFLRAAYLVILFCPCIAMAPLVGFFGTQFRKTWIHVVRVTLEKAG 129

Query: 229 PAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFE 288
           PAFIKWGQWAATRPDLFPRDLC +L+E  +KAP H F+Y++K IE AFG +LSEIF+ FE
Sbjct: 130 PAFIKWGQWAATRPDLFPRDLCDELAEFQTKAPSHKFSYSRKCIENAFGHKLSEIFENFE 189

Query: 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSV 348
           E PVASGSIAQVHRA+L++++PGQ+ KP+VVAVKVRHPGV E+I+RDF++INL AKISS 
Sbjct: 190 EEPVASGSIAQVHRATLKYKFPGQQTKPVVVAVKVRHPGVSEAIKRDFILINLVAKISSF 249

Query: 349 IPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAV 408
            P +KWLRLDES+QQF+VFMMSQVDL+REA HLSRFIYNFRRWKDVSFP P+YPLVHP+V
Sbjct: 250 FPNLKWLRLDESIQQFSVFMMSQVDLSREAVHLSRFIYNFRRWKDVSFPMPLYPLVHPSV 309

Query: 409 LVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVA 468
           LVET+EQGE V  YVD+ +GHE  KS LAHIGTHALLKMLLVDNFIHADMHPGNILVRV 
Sbjct: 310 LVETFEQGESVLHYVDQPEGHEHFKSTLAHIGTHALLKMLLVDNFIHADMHPGNILVRVG 369

Query: 469 QKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ 528
           + KS+   L +S+PHVIFLDVGMT ELSK +R  LVEFFKA+A +DGRTAAECTLRLSK+
Sbjct: 370 KSKST---LLKSRPHVIFLDVGMTTELSKREREYLVEFFKAIALQDGRTAAECTLRLSKR 426

Query: 529 QNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTL 588
           QNCP+PK+FIEEVD++F  W +PEG+ VH A+ MQQLLE VRR +VN+DGNVC V+VTTL
Sbjct: 427 QNCPDPKSFIEEVDKSFELWRSPEGESVHTADRMQQLLEHVRRCKVNIDGNVCAVIVTTL 486

Query: 589 VLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           VLEGWQR+LDP Y+V+  LQ LL KAD A+SLSY I+GL+AP
Sbjct: 487 VLEGWQRRLDPEYDVLHALQALLFKADLAESLSYAIEGLVAP 528


>gi|6554202|gb|AAF16648.1|AC011661_26 T23J18.5 [Arabidopsis thaliana]
          Length = 428

 Score =  746 bits (1925), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/431 (81%), Positives = 396/431 (91%), Gaps = 4/431 (0%)

Query: 201 MAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKA 260
           M    +S GP+FR++WL +V RTLE AGPAFIKWGQWAATRPDLFP+DLC +LS+LHS A
Sbjct: 1   MGLVVESCGPRFRKIWLEMVHRTLERAGPAFIKWGQWAATRPDLFPKDLCSQLSKLHSNA 60

Query: 261 PEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVA 320
           PEHSFAYTKKTIE+AFGR+LSEIF+ F+E PVASGSIAQVHRASLRF+YPGQK K  +VA
Sbjct: 61  PEHSFAYTKKTIEKAFGRKLSEIFEEFDEVPVASGSIAQVHRASLRFQYPGQKSKSSLVA 120

Query: 321 VKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAH 380
           VKVRHPGVGESIRRDFVIINL AKIS++IPA+KWLRLDESVQQF VFM+SQVDLAREA+H
Sbjct: 121 VKVRHPGVGESIRRDFVIINLVAKISTLIPALKWLRLDESVQQFGVFMLSQVDLAREASH 180

Query: 381 LSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIG 440
           LSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE GE V+RYVD ++GHE +K+ LAHIG
Sbjct: 181 LSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEHGESVARYVDGMEGHEWIKTRLAHIG 240

Query: 441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRS-KPHVIFLDVGMTAELSKTD 499
           THALLKMLLVDNFIHADMHPGNILVR   KK+S+  LF++ KPH++FLDVGMTAEL+K D
Sbjct: 241 THALLKMLLVDNFIHADMHPGNILVR---KKASRGGLFKTKKPHIVFLDVGMTAELAKND 297

Query: 500 RVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPA 559
           R NL++FFKAVARRDGRTAAE TL+LS++QNCPNP+AFIEEV+EAF FWGTPEGDLVHPA
Sbjct: 298 RENLLDFFKAVARRDGRTAAERTLKLSRKQNCPNPEAFIEEVEEAFKFWGTPEGDLVHPA 357

Query: 560 ECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           +CM +LLEKVRRHRVN+DGNVCTVMVTTLVLEGWQRKLDPGY+VM TLQT++LK DWAKS
Sbjct: 358 DCMHELLEKVRRHRVNIDGNVCTVMVTTLVLEGWQRKLDPGYDVMHTLQTMVLKTDWAKS 417

Query: 620 LSYTIDGLMAP 630
           LSYT+DGLMAP
Sbjct: 418 LSYTVDGLMAP 428


>gi|226493562|ref|NP_001145699.1| uncharacterized protein LOC100279203 [Zea mays]
 gi|219884079|gb|ACL52414.1| unknown [Zea mays]
 gi|414590541|tpg|DAA41112.1| TPA: putative ABC1 and kinase-like domain family protein [Zea mays]
          Length = 624

 Score =  732 bits (1890), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/625 (57%), Positives = 465/625 (74%), Gaps = 17/625 (2%)

Query: 3   RVLTFRNIWRAAQSVLTNER-GYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVP 61
           R+L      RAA    ++ R GY++ +   G      +     R +SHY   S  +    
Sbjct: 10  RLLAIGTNRRAATYSHSSHRSGYYTAVRDNGLSTRRKIPAILSRMFSHYKVISRKN---- 65

Query: 62  VYNVKQLLCRSCSVR---SLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQA 118
               +   CR+   R   +LSV+  +S AT QA +AWK+L +  ++R   FP + R A A
Sbjct: 66  --RAEDHKCRTRMSRGYHTLSVSVTNSSATQQAHLAWKQLGHMYTYRGPRFPLLGRAACA 123

Query: 119 FSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYF-PSQNAFYTRAQDGHAFVTSVLYS 177
            SL+ TR  + +PG++A   G++A A  V A++  F P  +   T+AQD   F++S++ S
Sbjct: 124 VSLSFTRFHI-IPGVMALAVGKMALAPPVLADSRPFIPRMDGIITKAQDTRQFLSSLVCS 182

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQW 237
           + E + LL+RA++L  LF P+  +APFAD F   FR  WL ++ RTLE AGPAFIKWGQW
Sbjct: 183 IWEGITLLVRAVHLAFLFFPATALAPFADKFSIAFRRRWLSLMRRTLEKAGPAFIKWGQW 242

Query: 238 AATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSI 297
           AATRPDLFP DLC +L++LHS AP H FAY+K  IE+AFGR+LSEIF+ FEE PVASGSI
Sbjct: 243 AATRPDLFPSDLCVELAKLHSAAPAHGFAYSKAAIEKAFGRQLSEIFESFEENPVASGSI 302

Query: 298 AQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRL 357
           AQ+HRA+L+ ++PG+ V     AVKVRHP VGESI+RDF++INL AK S ++P + WLRL
Sbjct: 303 AQIHRATLKHQHPGKHV-----AVKVRHPNVGESIKRDFLLINLVAKASDMVPGLSWLRL 357

Query: 358 DESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGE 417
           DESV+QFAVFMMSQVDL+REAAHLSRFIYNFRRW+ VSFPKP+YP VHP+VLVET+E GE
Sbjct: 358 DESVRQFAVFMMSQVDLSREAAHLSRFIYNFRRWRHVSFPKPLYPFVHPSVLVETFENGE 417

Query: 418 CVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRL 477
            VSR+++E++G+ R+K  LAHIGT+A LKMLL DNFIHADMHPGNILVR+ + K +++R 
Sbjct: 418 SVSRFMEEIEGNARMKKDLAHIGTYAFLKMLLEDNFIHADMHPGNILVRLNENKLARRRF 477

Query: 478 FRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAF 537
           FR+KPH++FLDVGMTAEL+++DR NL +FFKAVA RDGRTAA+CTL+LSK Q+CPNP AF
Sbjct: 478 FRAKPHIVFLDVGMTAELTRSDRDNLQQFFKAVATRDGRTAAKCTLQLSKNQSCPNPVAF 537

Query: 538 IEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKL 597
            EE+D+ F FWGTPEGD+ HP ECM +LL+ VRRH+VN+DGN+CTVMVT LVLEGWQRKL
Sbjct: 538 TEELDKTFTFWGTPEGDVFHPVECMHELLDTVRRHKVNIDGNICTVMVTILVLEGWQRKL 597

Query: 598 DPGYNVMDTLQTLLLKADWAKSLSY 622
           DPG+++M TL+TLLL+ D  + + +
Sbjct: 598 DPGFDIMQTLKTLLLEKDIKQPIDF 622


>gi|357122448|ref|XP_003562927.1| PREDICTED: probable serine/threonine-protein kinase abkC-like
           [Brachypodium distachyon]
          Length = 621

 Score =  726 bits (1875), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/629 (56%), Positives = 470/629 (74%), Gaps = 20/629 (3%)

Query: 4   VLTFRNIWRAAQSVLTNERGYHSELTKYG----AVV---AVGLRVP--YYRFYSHYGFPS 54
           +L  ++I     ++ TN R  H   +K+G    A+V    +  + P  + R +SHY    
Sbjct: 1   MLRLQSIGERLLAIGTNRRATHFPQSKHGSGYYAIVRDNGLSRKTPSVFSRMFSHYKVIV 60

Query: 55  GGHCSVPVYNVKQLLCRSCSVRSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISR 114
                V  +N ++ + R     SLSVA ++S A  QAQ+A KR  +  S+    FP +SR
Sbjct: 61  RN--KVEDHNYRKRISRGYG--SLSVALSNSSARQQAQLALKRFSHKYSYTGPRFPLLSR 116

Query: 115 IAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETE-YFPSQNAFYTRAQDGHAFVTS 173
            A A SL+LTRS + +PG++A   G++A +Q V A++  + P   +   + +D    ++S
Sbjct: 117 AACAISLSLTRSHV-IPGVMALAFGKMALSQPVLADSSSHRPKMESIVMKTRDTGQLLSS 175

Query: 174 VLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIK 233
           +++S+ E + L +RA++L  LF P+  +APFADSF  +FR  WL +V  TLE AGPAFIK
Sbjct: 176 MVWSVWEGITLFIRAVHLAFLFFPATALAPFADSFSIEFRRRWLSLVRHTLEKAGPAFIK 235

Query: 234 WGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVA 293
           WGQWAATRPDLFP DLC +L++LHS AP H FAY+K  IE+AFGR+L+EIF+ FEE PVA
Sbjct: 236 WGQWAATRPDLFPSDLCVELAKLHSGAPMHGFAYSKAAIEKAFGRKLAEIFETFEENPVA 295

Query: 294 SGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVK 353
           SGSIAQVHRA+LR ++PG+      VAVKVRHPGVGESI++DF++IN  AK+S+V+P + 
Sbjct: 296 SGSIAQVHRATLRNQHPGK-----YVAVKVRHPGVGESIKKDFLLINFMAKVSNVVPGLS 350

Query: 354 WLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETY 413
           WLRLDESV+QFAVFMMSQVDL+REA HL RFI+NFR+W+ VSFP+P+YPLVHPAVLVE++
Sbjct: 351 WLRLDESVRQFAVFMMSQVDLSREAGHLHRFIHNFRKWRHVSFPEPLYPLVHPAVLVESF 410

Query: 414 EQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSS 473
           E GE V+R+VDE++G+ R+K  LAHIGT+A LKMLL DNFIHADMHPGNILVR+ + K+ 
Sbjct: 411 ENGESVARFVDEIEGNARIKKDLAHIGTYAFLKMLLEDNFIHADMHPGNILVRLNESKNK 470

Query: 474 QKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPN 533
           +KR FRSKPH++FLDVGMTAELS  DR NL +FFKAVA RDG TAA+CTL+LSK QNCP+
Sbjct: 471 RKRFFRSKPHIVFLDVGMTAELSTDDRDNLKQFFKAVAIRDGHTAAKCTLQLSKHQNCPD 530

Query: 534 PKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGW 593
           P AF EE+D+ FAFWGTPEGD+ HP ECM QLL+ VRRH+VN+DGN+CTVMVT LVLEGW
Sbjct: 531 PVAFTEELDKKFAFWGTPEGDIFHPVECMHQLLDTVRRHKVNIDGNICTVMVTILVLEGW 590

Query: 594 QRKLDPGYNVMDTLQTLLLKADWAKSLSY 622
           QRKLDPG+++M+TL+TLL++ +  +   Y
Sbjct: 591 QRKLDPGFDIMETLKTLLIEKEVKQPPDY 619


>gi|218199836|gb|EEC82263.1| hypothetical protein OsI_26459 [Oryza sativa Indica Group]
          Length = 623

 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/607 (58%), Positives = 454/607 (74%), Gaps = 15/607 (2%)

Query: 19  TNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQLLCR---SCSV 75
           ++  GY++     G      + + + R +SHY         V         CR   S   
Sbjct: 27  SHRSGYYTAARDNGLSAKRKIPIVFSRMFSHY------KVIVRKNKAGDHKCRNRISRGF 80

Query: 76  RSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLALTRSPLLVPGIIA 135
           R+ S   A+S AT  AQ+AWKRL +   +    FP ISR A A S + TR  + VPG++A
Sbjct: 81  RTFSGTVANSSATQHAQLAWKRLSHTYMYSGPRFPLISRAACALSFSFTRFHV-VPGVMA 139

Query: 136 FTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLF 195
              G+ A ++ V A++ + P+     T A+D   F++S+++S+ E V LL+RA++L +LF
Sbjct: 140 LAFGKFALSRPVLADSPHLPTMEGIVTNARDTRQFLSSIVWSIWEGVTLLIRAVHLAILF 199

Query: 196 SPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSE 255
            P+  ++PFAD+F   FR  WL +V RTLE AGPAFIKWGQWAATRPDLFP DLC +L++
Sbjct: 200 FPATALSPFADTFSVGFRRRWLRLVRRTLEIAGPAFIKWGQWAATRPDLFPSDLCVELAK 259

Query: 256 LHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVK 315
           LHS AP H FAY+K TIE+AFGR+LSEIF+ FEE PVASGSIAQVHRA+LR  +  + V 
Sbjct: 260 LHSAAPAHGFAYSKATIEKAFGRKLSEIFETFEEEPVASGSIAQVHRATLRDLHTEKHV- 318

Query: 316 PIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLA 375
               AVKVRHPGVGESI++DF++INL AK S+V+P + WLRLDESV+QFAVFMMSQVDL+
Sbjct: 319 ----AVKVRHPGVGESIKKDFLLINLLAKASNVVPGLSWLRLDESVRQFAVFMMSQVDLS 374

Query: 376 REAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSA 435
           REAAHLSRFIYNFRRW+ VSFPKP+YPLVHP+VLVET+E GE VSR++DE++G+ R+K  
Sbjct: 375 REAAHLSRFIYNFRRWRHVSFPKPLYPLVHPSVLVETFENGESVSRFMDEIEGNARMKRD 434

Query: 436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL 495
           LAHIGT+A LKMLL DNFIHADMHPGNILVR+ ++K  +K  FR KPH++FLDVGMTAEL
Sbjct: 435 LAHIGTYAFLKMLLEDNFIHADMHPGNILVRLNERKPKRKLFFRPKPHIVFLDVGMTAEL 494

Query: 496 SKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL 555
           ++ DR NL +FFKAVA RDGRTAA CTL+LSKQQ+CPNP AFIEE+D+ F+FWGTPEGD+
Sbjct: 495 TRDDRDNLQQFFKAVATRDGRTAANCTLQLSKQQSCPNPVAFIEELDKTFSFWGTPEGDI 554

Query: 556 VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKAD 615
            HP ECM QLL+ VRRH+VN+DGN+CTVMVT LVLEGWQRKLDPG+++M TL+TLLL  D
Sbjct: 555 FHPVECMHQLLDTVRRHKVNIDGNICTVMVTILVLEGWQRKLDPGFDIMHTLKTLLLDKD 614

Query: 616 WAKSLSY 622
             + + +
Sbjct: 615 IKQPVDF 621


>gi|115472745|ref|NP_001059971.1| Os07g0558000 [Oryza sativa Japonica Group]
 gi|34394005|dbj|BAC84029.1| putative ubiquinone biosynthesis protein AarF [Oryza sativa
           Japonica Group]
 gi|113611507|dbj|BAF21885.1| Os07g0558000 [Oryza sativa Japonica Group]
 gi|215678826|dbj|BAG95263.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222637271|gb|EEE67403.1| hypothetical protein OsJ_24717 [Oryza sativa Japonica Group]
          Length = 623

 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/607 (58%), Positives = 454/607 (74%), Gaps = 15/607 (2%)

Query: 19  TNERGYHSELTKYGAVVAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQLLCR---SCSV 75
           ++  GY++     G      +   + R +SHY         V         CR   S   
Sbjct: 27  SHRSGYYTAARDNGLSAKRKIPTVFSRMFSHY------KVIVRKNKAGDHKCRNRISRGF 80

Query: 76  RSLSVASASSVATHQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLALTRSPLLVPGIIA 135
           R+ S   A+S AT  AQ+AWKRL +   +    FP ISR A A S + TR  + VPG++A
Sbjct: 81  RTFSGTVANSSATQHAQLAWKRLSHTYMYSGPRFPLISRAACALSFSFTRFHV-VPGVMA 139

Query: 136 FTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLF 195
              G+ A ++ V A++ + P+     T A+D   F++S+++S+ E V LL+RA++L +LF
Sbjct: 140 LAFGKFALSRPVLADSPHLPTMEGIVTNARDTRQFLSSIVWSIWEGVTLLIRAVHLAILF 199

Query: 196 SPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSE 255
            P+  ++PFAD+F   FR  WL +V RTLE AGPAFIKWGQWAATRPDLFP DLC +L++
Sbjct: 200 FPATALSPFADTFSVGFRRRWLRLVRRTLEIAGPAFIKWGQWAATRPDLFPSDLCVELAK 259

Query: 256 LHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVK 315
           LHS AP H FAY+K TIE+AFGR+LSEIF+ FEE PVASGSIAQVHRA+LR ++  + V 
Sbjct: 260 LHSAAPAHGFAYSKATIEKAFGRKLSEIFETFEEEPVASGSIAQVHRATLRDQHTEKHV- 318

Query: 316 PIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLA 375
               AVKVRHPGVGESI++DF++INL AK S+V+P + WLRLDESV+QFAVFMMSQVDL+
Sbjct: 319 ----AVKVRHPGVGESIKKDFLLINLLAKASNVVPGLSWLRLDESVRQFAVFMMSQVDLS 374

Query: 376 REAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSA 435
           REAAHLSRFIYNFRRW+ VSFPKP+YPLVHP+VLVET+E GE VSR++DE++G+ R+K  
Sbjct: 375 REAAHLSRFIYNFRRWRHVSFPKPLYPLVHPSVLVETFENGESVSRFMDEIEGNARMKRD 434

Query: 436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL 495
           LAHIGT+A LKMLL DNFIHADMHPGNILVR+ ++K  +K  FR KPH++FLDVGMTAEL
Sbjct: 435 LAHIGTYAFLKMLLEDNFIHADMHPGNILVRLNERKPKRKLFFRPKPHIVFLDVGMTAEL 494

Query: 496 SKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL 555
           ++ DR NL +FFKAVA RDGRTAA CTL+LSKQQ+CPNP AFIEE+D+ F+FWGTPEGD+
Sbjct: 495 TRDDRDNLQQFFKAVATRDGRTAANCTLQLSKQQSCPNPVAFIEELDKTFSFWGTPEGDI 554

Query: 556 VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKAD 615
            HP ECM QLL+ VRRH+VN+DGN+CTVMVT LVLEGWQRKLDPG+++M TL+TLLL  D
Sbjct: 555 FHPVECMHQLLDTVRRHKVNIDGNICTVMVTILVLEGWQRKLDPGFDIMHTLKTLLLDKD 614

Query: 616 WAKSLSY 622
             + + +
Sbjct: 615 IKQPVDF 621


>gi|255569639|ref|XP_002525785.1| ATATH8, putative [Ricinus communis]
 gi|223534935|gb|EEF36621.1| ATATH8, putative [Ricinus communis]
          Length = 496

 Score =  707 bits (1824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/501 (69%), Positives = 400/501 (79%), Gaps = 28/501 (5%)

Query: 120 SLALTRSPLLVPGIIAFTSGQLAWAQ-RVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSL 178
           SLALTRS L+ PG+IAF  G+LAW + R  AE E   +++A                   
Sbjct: 2   SLALTRSNLVAPGVIAFIFGELAWTRHRTWAEAESTMTRDA------------------- 42

Query: 179 VECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWA 238
                   RA+YL VLF P ++MAPFADS   +FR+ WL VV  TLE AGPAFIKWGQWA
Sbjct: 43  --------RAVYLAVLFFPCVVMAPFADSRSYKFRKTWLCVVRCTLEKAGPAFIKWGQWA 94

Query: 239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIA 298
           ATRPDLFP+D+C +L+ LH+KAP HSF +TK TIERAFGR L EIF  FEE PVASGS+A
Sbjct: 95  ATRPDLFPQDVCAELARLHTKAPAHSFGFTKLTIERAFGRTLPEIFATFEEEPVASGSVA 154

Query: 299 QVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLD 358
           QVHRA+L++RYPG++ KPI+VAVKVRHP V E+IRRDF +IN  AKIS  IP + W RLD
Sbjct: 155 QVHRATLKYRYPGKETKPILVAVKVRHPSVAEAIRRDFALINFVAKISKFIPKLNWSRLD 214

Query: 359 ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGEC 418
           ESVQQFAVFMMSQVDLAREAAHLSRFIYNFR  KDVSFPKP+YPLVHPAVLVETYEQGE 
Sbjct: 215 ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRACKDVSFPKPLYPLVHPAVLVETYEQGEN 274

Query: 419 VSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLF 478
           +  YVDEL+G++R++SALAHIGT+ALLKMLLVDNFIHADMHPGNILVR+   K S K+LF
Sbjct: 275 ILHYVDELEGNKRIRSALAHIGTNALLKMLLVDNFIHADMHPGNILVRLTDDKLSHKQLF 334

Query: 479 RSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFI 538
            S+P V+FLDVGMTAELSK DR N++EFFKAVA  DGRTAAEC LRL+KQQNCPNPKAFI
Sbjct: 335 GSRPQVVFLDVGMTAELSKRDRRNVLEFFKAVALLDGRTAAECILRLAKQQNCPNPKAFI 394

Query: 539 EEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLD 598
           EEV++ +  W +P+   VHPAECMQQLLE VRRH+VN+DG VC VMVTTLVLEGWQRKLD
Sbjct: 395 EEVEKCYNSWNSPDNISVHPAECMQQLLEHVRRHKVNIDGYVCIVMVTTLVLEGWQRKLD 454

Query: 599 PGYNVMDTLQTLLLKADWAKS 619
           P Y+VM TLQ+LL KADWA++
Sbjct: 455 PEYDVMHTLQSLLFKADWAET 475


>gi|168028527|ref|XP_001766779.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162681988|gb|EDQ68410.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 492

 Score =  676 bits (1744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/498 (67%), Positives = 404/498 (81%), Gaps = 6/498 (1%)

Query: 133 IIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLG 192
           +IA   G+   A + +A  E FP++      +   H  + S++ +L+E V+L++RA YL 
Sbjct: 1   MIAVIVGEATLAHQSAAGVESFPARQDLSQPSHPVH--IVSLVLTLLELVLLVIRATYLA 58

Query: 193 VLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKK 252
           VLF+P+I++APFADSFGP+FR+ W+ +V  +LE  G AFIKWGQWAA RPDLFPRDLC +
Sbjct: 59  VLFTPAIVLAPFADSFGPKFRKRWISLVHFSLEHGGAAFIKWGQWAAARPDLFPRDLCAQ 118

Query: 253 LSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQ 312
           L++LHSKAP H F+ TK+ IE AFGRRL EIF+ FEE PVASGSIAQ+HRA LRFRYPGQ
Sbjct: 119 LTKLHSKAPAHKFSQTKQIIEGAFGRRLDEIFEDFEEEPVASGSIAQIHRAVLRFRYPGQ 178

Query: 313 KVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQV 372
             KP+VVAVKVRHPGV E IRRDF IIN  AKIS+ IP + WLRLDES+QQFAVFM++QV
Sbjct: 179 MSKPMVVAVKVRHPGVSEEIRRDFTIINWCAKISNFIPGLAWLRLDESIQQFAVFMLTQV 238

Query: 373 DLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERL 432
           DLAREAAHLSRFIYNFRRWKDVSFPKP+YPLVHPAVLVET+EQGE VSR+VD  +G  RL
Sbjct: 239 DLAREAAHLSRFIYNFRRWKDVSFPKPLYPLVHPAVLVETFEQGESVSRFVDR-RGKNRL 297

Query: 433 KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMT 492
            SALA IGTH LLKMLLVDNF+HAD+HPGNILVR+       K+ F+S+PHV+ LDVGM 
Sbjct: 298 NSALASIGTHTLLKMLLVDNFVHADLHPGNILVRM---DPPNKQSFQSRPHVVLLDVGMI 354

Query: 493 AELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPE 552
           AEL+  DR  L++FFKAVA++DG+ AAECTL+ S+ QNCPNP AFI++V++ F FW T E
Sbjct: 355 AELNAQDRYTLLDFFKAVAQKDGKKAAECTLKFSRSQNCPNPSAFIDDVEKVFQFWNTEE 414

Query: 553 GDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLL 612
           G+ +H  +CMQ+LLE+VRRHRVN+DG+VCTVMVTTLVLEGWQRKLDP  N+MDTL+ LL 
Sbjct: 415 GNALHTGDCMQELLEQVRRHRVNIDGDVCTVMVTTLVLEGWQRKLDPELNIMDTLRQLLF 474

Query: 613 KADWAKSLSYTIDGLMAP 630
           KADW  SLSYTIDG+MAP
Sbjct: 475 KADWVNSLSYTIDGVMAP 492


>gi|4585871|gb|AAD25544.1|AC005850_1 Unknown protein [Arabidopsis thaliana]
          Length = 428

 Score =  675 bits (1742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/431 (74%), Positives = 375/431 (87%), Gaps = 4/431 (0%)

Query: 201 MAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKA 260
           MA    + GP++R+L   V+ RTLE AGPAFIK+GQW ATRPD F +DLC +LS+LHS A
Sbjct: 1   MALLGFACGPRYRQLQYEVLHRTLEKAGPAFIKFGQWIATRPDRFNKDLCLQLSKLHSNA 60

Query: 261 PEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVA 320
           PEHSFA+TKK+IE AFGR+LSEIF+ F+EAPVASGSIAQVHRASL+F+Y GQKVK   VA
Sbjct: 61  PEHSFAFTKKSIENAFGRKLSEIFEEFDEAPVASGSIAQVHRASLKFQYAGQKVKSSEVA 120

Query: 321 VKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAH 380
           VKVRHP V E+++RDFVIIN  A++++ IP + WLRLDE VQQF+V+M+SQVDL+REA+H
Sbjct: 121 VKVRHPCVEETMKRDFVIINFVARLTTFIPGLNWLRLDECVQQFSVYMLSQVDLSREASH 180

Query: 381 LSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIG 440
           LSRFIYNFR WKDVSFPKP+YPL+HPAVLVETYE GE V+RYVD  +G E+LK+ +AHIG
Sbjct: 181 LSRFIYNFRGWKDVSFPKPIYPLIHPAVLVETYEHGESVARYVDGSEGQEKLKAKVAHIG 240

Query: 441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRS-KPHVIFLDVGMTAELSKTD 499
           T+ALLKMLLVDNFIHADMHPGNILVR     ++++ LFRS KPH++FLDVGMTAELSKTD
Sbjct: 241 TNALLKMLLVDNFIHADMHPGNILVR---PNNTRRGLFRSRKPHIVFLDVGMTAELSKTD 297

Query: 500 RVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPA 559
           R NL+ FFKAVARRDGRTAAE TL+LSKQQNCP+P+AFI+EV+EAF FWGT EGDLVHPA
Sbjct: 298 RDNLLGFFKAVARRDGRTAAERTLKLSKQQNCPDPQAFIKEVEEAFTFWGTEEGDLVHPA 357

Query: 560 ECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           +CM +L EK+R HRVN+DGNV TVM TTLVLEGWQRKLDPGY+VM TLQT+LLK DW KS
Sbjct: 358 DCMHELFEKMRSHRVNIDGNVSTVMFTTLVLEGWQRKLDPGYDVMRTLQTMLLKTDWMKS 417

Query: 620 LSYTIDGLMAP 630
           LSYTIDGLMAP
Sbjct: 418 LSYTIDGLMAP 428


>gi|302760341|ref|XP_002963593.1| hypothetical protein SELMODRAFT_141585 [Selaginella moellendorffii]
 gi|300168861|gb|EFJ35464.1| hypothetical protein SELMODRAFT_141585 [Selaginella moellendorffii]
          Length = 506

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 309/513 (60%), Positives = 392/513 (76%), Gaps = 8/513 (1%)

Query: 119 FSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSL 178
            SLA+ RS    P I AF  G+    +R+ AE+E  P+       +    ++V  +  SL
Sbjct: 1   MSLAVVRSQF-SPRIAAFLVGEATLMRRLVAESEA-PTCVPLSYHSDIQPSYVLWIFSSL 58

Query: 179 VECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWA 238
           VE ++LL+RALYL V+F+P++ +APFAD    + R  WL +   +LE AG AFIKWGQWA
Sbjct: 59  VEGMMLLLRALYLVVVFAPALAVAPFADPSDAKLRLFWLELFHSSLERAGAAFIKWGQWA 118

Query: 239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIA 298
           ATRPDLFP+D+C+ +S+LHSKAP HSF+ T+KT+E AFG+R+ E+F+ FEE P+ASGS+A
Sbjct: 119 ATRPDLFPKDVCETMSKLHSKAPAHSFSQTRKTVEGAFGKRIEELFEDFEEEPLASGSVA 178

Query: 299 QVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLD 358
           QVHRA LR    GQ  KP+ VAVKVRHPGV E IRRDF++IN   K  S    +++LRL+
Sbjct: 179 QVHRAVLR----GQGKKPVTVAVKVRHPGVTEVIRRDFILINWVVKACSHFSGLRYLRLE 234

Query: 359 ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGEC 418
           +SVQQFAVFM++QVDLAREAAHLSRF+YNFR WKDVSFPKP+YPLVHPAVLVETYE+GE 
Sbjct: 235 DSVQQFAVFMLTQVDLAREAAHLSRFLYNFRSWKDVSFPKPLYPLVHPAVLVETYERGES 294

Query: 419 VSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQ-KKSSQKRL 477
           VSR+VD  +    + SALAHIGTH LLKMLLVDNFIHAD+HPGNILVR+ +      K L
Sbjct: 295 VSRFVDSPK-RSHINSALAHIGTHTLLKMLLVDNFIHADLHPGNILVRMERFNPVPGKGL 353

Query: 478 FRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAF 537
           FRS PH++FLDVGMTAELS  DR  L+EFFK +A RDGR  AEC L+ S+ Q CP+PK F
Sbjct: 354 FRSHPHLVFLDVGMTAELSNKDRRTLLEFFKGIAMRDGRKTAECALQFSELQTCPDPKGF 413

Query: 538 IEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKL 597
           + EV++ F  W   +  ++H  +C+Q+LLE+VRRH+VN+DG+VCTV+VTTLVLEGWQRKL
Sbjct: 414 VREVEDCFKDWNAMDSAVLHTGDCIQELLERVRRHKVNIDGDVCTVIVTTLVLEGWQRKL 473

Query: 598 DPGYNVMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           DP YN+M+TLQ+L+L+++ A SLSYTID +MAP
Sbjct: 474 DPEYNIMETLQSLVLQSNMASSLSYTIDSIMAP 506


>gi|302799467|ref|XP_002981492.1| hypothetical protein SELMODRAFT_420999 [Selaginella moellendorffii]
 gi|300150658|gb|EFJ17307.1| hypothetical protein SELMODRAFT_420999 [Selaginella moellendorffii]
          Length = 625

 Score =  615 bits (1587), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 309/518 (59%), Positives = 394/518 (76%), Gaps = 8/518 (1%)

Query: 114 RIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTS 173
           ++    SLA+ RS    P I AF  G+    +R+ AE+E  P+       +    ++V  
Sbjct: 115 KVVGTMSLAVVRSQF-SPRIAAFLVGEATLMRRLVAESEA-PTCVPLSYHSDIQPSYVLW 172

Query: 174 VLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIK 233
           +  SLVE ++LL+RALYL V+F+P++ +APFAD    + R  WL +   +LE AG AFIK
Sbjct: 173 IFSSLVEGMMLLLRALYLVVVFAPALAVAPFADPSDAKLRLFWLELFHSSLERAGAAFIK 232

Query: 234 WGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVA 293
           WGQWAATRPDLFP+D+C+ LS+LHSKAP HSF+ T+KT+E AFG+R+ E+F+ FEE P+A
Sbjct: 233 WGQWAATRPDLFPKDVCETLSKLHSKAPAHSFSQTRKTVEGAFGKRIEELFEDFEEEPLA 292

Query: 294 SGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVK 353
           SGS+AQVHRA LR    GQ  KP+ VAVKVRHPGV E IRRDF++IN   K  +    ++
Sbjct: 293 SGSVAQVHRAVLR----GQGKKPVTVAVKVRHPGVTEVIRRDFILINWVVKACNHFSGLR 348

Query: 354 WLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETY 413
           +LRL++SVQQFAVFM++QVDLAREAAHLSRF+YNFR WKDVSFPKP+YPLVHPAVLVETY
Sbjct: 349 YLRLEDSVQQFAVFMLTQVDLAREAAHLSRFLYNFRSWKDVSFPKPLYPLVHPAVLVETY 408

Query: 414 EQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQ-KKS 472
           E+GE VSR+VD  +    + SALAHIGTH LLKMLLVDNFIHAD+HPGNILVR+ +    
Sbjct: 409 ERGESVSRFVDSPK-RSHINSALAHIGTHTLLKMLLVDNFIHADLHPGNILVRMERFNPV 467

Query: 473 SQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCP 532
             K LFRS PH++FLDVGMTAELS  DR  L+EFFK +A RDGR  AEC L+ S+ Q CP
Sbjct: 468 PGKGLFRSHPHLVFLDVGMTAELSNKDRRTLLEFFKGIAMRDGRKTAECALQFSELQTCP 527

Query: 533 NPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEG 592
           +PK F+ EV++ F  W   +  ++H  +C+Q+LLE+VRRH+VN+DG+VCTV+VTTLVLEG
Sbjct: 528 DPKGFVREVEDCFKDWNAMDSAVLHTGDCIQELLERVRRHKVNIDGDVCTVIVTTLVLEG 587

Query: 593 WQRKLDPGYNVMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           WQRKLDP YN+M+TLQ+L+L+++ A SLSYTID +MAP
Sbjct: 588 WQRKLDPEYNIMETLQSLVLQSNMATSLSYTIDSIMAP 625


>gi|168019459|ref|XP_001762262.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686666|gb|EDQ73054.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 443

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 236/452 (52%), Positives = 315/452 (69%), Gaps = 13/452 (2%)

Query: 179 VECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWA 238
           VE +IL  R +YL VLF+P++++  F +      R  WLH++LR+LE AGPAFIKWGQWA
Sbjct: 5   VEAIILWFRLIYLVVLFTPTLVVGVFINQTEGGLRRFWLHLLLRSLEAAGPAFIKWGQWA 64

Query: 239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIA 298
           +TRPD+FP D+C +LS LH +AP HS+A T+K +E+AF   +  +FD FE  PVASGSIA
Sbjct: 65  STRPDIFPADICDELSRLHMQAPRHSYAETRKIMEKAFRVPIETLFDDFECEPVASGSIA 124

Query: 299 QVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLD 358
           Q+HRA L+ + PG    P++VAVKVRHP V + I++DFVII   A+IS+ +P +K L+LD
Sbjct: 125 QIHRAVLK-KPPGNG-PPLIVAVKVRHPKVNDLIQKDFVIIRYLARISTALPGIKHLQLD 182

Query: 359 ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGEC 418
           +SVQ FA FM  QVDL  EAAHL RFIYNFR+ KDVSFP P+YP VHP VLVETYE+G  
Sbjct: 183 KSVQHFAAFMTRQVDLTLEAAHLQRFIYNFRKSKDVSFPTPIYPYVHPTVLVETYEEGLS 242

Query: 419 VSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLF 478
           V++YV+      +  S LA+IG+  LLKM+L DNFIH D+HPGNI VR            
Sbjct: 243 VAKYVNS-GPLTKTHSQLANIGSSCLLKMMLQDNFIHGDLHPGNIFVRFVD--------- 292

Query: 479 RSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFI 538
            + P ++ LDVGMTAEL+   R  +++ FKAVA ++GR  A  TL+ S  Q CP+P+AF 
Sbjct: 293 -NVPKIVLLDVGMTAELNSHSRAVMLQLFKAVASKNGRDVATYTLQFSDDQTCPDPEAFK 351

Query: 539 EEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLD 598
           + VD+ F  + +  G   +  ECM +L +++R+H VN+DG+VCTVMVTTL+LEGWQRKLD
Sbjct: 352 QAVDDKFKEYLSIRGTAKNTGECMTELFDQIRKHHVNMDGDVCTVMVTTLILEGWQRKLD 411

Query: 599 PGYNVMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           P  ++   L  +L+ A++A    YTI  + AP
Sbjct: 412 PDLDLFKILGDMLMAAEYAIPFDYTISAVAAP 443


>gi|168019658|ref|XP_001762361.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686439|gb|EDQ72828.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 437

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 237/453 (52%), Positives = 318/453 (70%), Gaps = 17/453 (3%)

Query: 179 VECVILLMRALYLGVLFSPSIMMAPF-ADSFGPQFRELWLHVVLRTLETAGPAFIKWGQW 237
           VE V+L  R ++L  LF+P++++  F +D+ GP  R  WLH++LR+LE AGPAFIKWGQW
Sbjct: 1   VEAVLLWCRVVFLVALFTPALLVGAFVSDADGP-LRRFWLHILLRSLEAAGPAFIKWGQW 59

Query: 238 AATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSI 297
           A+TRPD+FP D+C +LS LH +AP+H+FA TKK + +AF   +  +F+ FEE PVASGSI
Sbjct: 60  ASTRPDIFPADICDELSRLHMQAPKHTFAETKKILLKAFRVPIEALFEEFEEEPVASGSI 119

Query: 298 AQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRL 357
           AQ++RA L  R P     P+VVA  VRHP V E +++DFVII   A +S+V+P +K L+L
Sbjct: 120 AQIYRAIL--RKPLGNGPPLVVA--VRHPKVHELMQKDFVIIRHLAALSTVLPGLKHLQL 175

Query: 358 DESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGE 417
           D++VQ FA FM  QVDL  EAAHL RFIYNFR+ KDVSFP P+YPLVHP VLVETYE+G 
Sbjct: 176 DKTVQHFAAFMTKQVDLTLEAAHLQRFIYNFRKSKDVSFPTPIYPLVHPTVLVETYEEGL 235

Query: 418 CVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRL 477
            V++YV+      ++ S LA+IG+  LLKM+LV+NFIH D+HPGNI V          R 
Sbjct: 236 SVAKYVNS-GPLTKIHSRLAYIGSSCLLKMMLVNNFIHGDLHPGNIFV----------RF 284

Query: 478 FRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAF 537
             + P V+ LDVGMTAEL+   R  ++  FKA+A ++GR  A  TL+ S+ Q CP+P+AF
Sbjct: 285 VNNIPKVVLLDVGMTAELNAHSRAVMLGLFKAIAAKNGRDVAHYTLQFSEDQTCPDPEAF 344

Query: 538 IEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKL 597
            + VD+ F  + +  G   +  ECM +L ++VR+HRVN+DG+VCTVMVTTL+LEGWQRKL
Sbjct: 345 KKAVDDKFNEYLSIRGTAKNTGECMTELFDQVRQHRVNMDGDVCTVMVTTLILEGWQRKL 404

Query: 598 DPGYNVMDTLQTLLLKADWAKSLSYTIDGLMAP 630
           DP  ++   +  LL +A+ A    YTI  + AP
Sbjct: 405 DPDLDLFKMMGELLSEAEDAVPFYYTISAIAAP 437


>gi|42571949|ref|NP_974065.1| aarF domain-containing kinase [Arabidopsis thaliana]
 gi|332195745|gb|AEE33866.1| aarF domain-containing kinase [Arabidopsis thaliana]
          Length = 477

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 234/415 (56%), Positives = 307/415 (73%), Gaps = 11/415 (2%)

Query: 35  VAVGLRVPYYRFYSHYGFPSGGHCSVPVYNVKQLLCRS----CSVRSLSVASASSVATHQ 90
           + V +++P +R  S     +G H    ++NVK     S     + RS S+A AS+V    
Sbjct: 27  INVSVKLPQFRIQS-----NGYHTLGLLHNVKGRFLGSNHHQLARRSYSIAVASNVVKQH 81

Query: 91  AQIAWKRLFYYSSF-RDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSA 149
           AQ++W RL    +  R    P IS+IAQA SL+L RS  L+PG++A T  Q+A+AQRV  
Sbjct: 82  AQVSWGRLVQRVTLSRSWNLPRISQIAQACSLSLARSHFLLPGLLALTYRQVAYAQRVVP 141

Query: 150 E-TEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSF 208
               Y PS  + Y  + +    ++S+++S V+ V+L+ RALYL +LFSP+++MA    + 
Sbjct: 142 NPVVYSPSHISPYRSSINFPIVLSSLVFSAVKGVVLIGRALYLAILFSPNVIMALLGFAC 201

Query: 209 GPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYT 268
           GP++R+L   V+ RTLE AGPAFIK+GQW ATRPD F +DLC +LS+LHS APEHSFA+T
Sbjct: 202 GPRYRQLQYEVLHRTLEKAGPAFIKFGQWIATRPDRFNKDLCLQLSKLHSNAPEHSFAFT 261

Query: 269 KKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGV 328
           KK+IE AFGR+LSEIF+ F+EAPVASGSIAQVHRASL+F+Y GQKVK   VAVKVRHP V
Sbjct: 262 KKSIENAFGRKLSEIFEEFDEAPVASGSIAQVHRASLKFQYAGQKVKSSEVAVKVRHPCV 321

Query: 329 GESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
            E+++RDFVIIN  A++++ IP + WLRLDE VQQF+V+M+SQVDL+REA+HLSRFIYNF
Sbjct: 322 EETMKRDFVIINFVARLTTFIPGLNWLRLDECVQQFSVYMLSQVDLSREASHLSRFIYNF 381

Query: 389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHA 443
           R WKDVSFPKP+YPL+HPAVLVETYE GE V+RYVD  +G E+LK+ +AHIGT+A
Sbjct: 382 RGWKDVSFPKPIYPLIHPAVLVETYEHGESVARYVDGSEGQEKLKAKVAHIGTNA 436


>gi|302792893|ref|XP_002978212.1| hypothetical protein SELMODRAFT_107962 [Selaginella moellendorffii]
 gi|300154233|gb|EFJ20869.1| hypothetical protein SELMODRAFT_107962 [Selaginella moellendorffii]
          Length = 413

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 228/426 (53%), Positives = 302/426 (70%), Gaps = 16/426 (3%)

Query: 205 ADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHS 264
           AD    + R  WL+V+LRTLE AGPAFIKWGQWAATRPD+FP D+C++LS+LHS+AP H+
Sbjct: 4   ADKPDSRLRAAWLYVLLRTLEYAGPAFIKWGQWAATRPDMFPADICQQLSKLHSQAPAHT 63

Query: 265 FAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324
           F  T+K IE+AF   L  +F+ F E P+ASGSIAQVH+A LR +  GQK  P+VVAVKVR
Sbjct: 64  FYETRKIIEKAFHLPLDRLFEEFSEKPIASGSIAQVHKAVLRTK--GQK--PLVVAVKVR 119

Query: 325 HPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRF 384
           HP V   I+RDFVI+N  A++S+   +++ L+LD++VQQFA FM  QVDL  EAAHL RF
Sbjct: 120 HPRVSTVIQRDFVIMNWLARMSTKFSSLEHLQLDKTVQQFATFMTKQVDLTLEAAHLMRF 179

Query: 385 IYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL 444
           IYNFR+W++VSFP+P+YPLVHP VLVET+E+G  +  ++DE     +L S LA +G+  L
Sbjct: 180 IYNFRQWRNVSFPRPIYPLVHPEVLVETFEEGRSIQEFIDE-GPRTKLHSQLARLGSSLL 238

Query: 445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLV 504
           LKMLL DNFIH D+HPGN+ V++ +K           P +I LDVGMTAELS+ +R  L+
Sbjct: 239 LKMLLSDNFIHGDLHPGNMFVKLGKK----------VPQLILLDVGMTAELSQRNRYILL 288

Query: 505 EFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQ 564
           E FKA++ +DG   A C L  S+ Q C NP+AFI +VD  F  + +  G      + + +
Sbjct: 289 ELFKALSDKDGARVARCALEFSEDQTCTNPEAFIGDVDNTFKQYLSVRGT-SKMGDYIAE 347

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYTI 624
           L E+VRR+RVN+DG VCTVMVT ++LEGWQRKLD   ++M  ++ LL KA+W  S  Y +
Sbjct: 348 LFEQVRRYRVNLDGEVCTVMVTVVILEGWQRKLDMSLDIMRMVKELLFKAEWTASFEYVM 407

Query: 625 DGLMAP 630
             + AP
Sbjct: 408 GAIAAP 413


>gi|302765857|ref|XP_002966349.1| hypothetical protein SELMODRAFT_144094 [Selaginella moellendorffii]
 gi|300165769|gb|EFJ32376.1| hypothetical protein SELMODRAFT_144094 [Selaginella moellendorffii]
          Length = 413

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/426 (53%), Positives = 302/426 (70%), Gaps = 16/426 (3%)

Query: 205 ADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHS 264
           AD    + R  WL+V+LRTLE AGPAFIKWGQWAATRPD+FP D+C++LS+LHS+AP H+
Sbjct: 4   ADKPDSRLRAAWLYVLLRTLEYAGPAFIKWGQWAATRPDMFPADICQQLSKLHSQAPAHT 63

Query: 265 FAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324
           F  T+K IE+AF   L  +F+ F E P+ASGSIAQVH+A LR +  GQK  P+VVAVKVR
Sbjct: 64  FYETRKIIEKAFHLPLDRLFEEFSEKPIASGSIAQVHKAVLRTK--GQK--PLVVAVKVR 119

Query: 325 HPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRF 384
           HP V   I+RDFVI+N  A++S+   +++ L+LD++VQQFA FM  QVDL  EAAHL RF
Sbjct: 120 HPRVSTVIQRDFVIMNWLARMSTKFSSLEHLQLDKTVQQFATFMTKQVDLTLEAAHLMRF 179

Query: 385 IYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL 444
           IYNFR+W++VSFP+P+YPLVHP VLVET+E+G  +  ++DE     +L S LA +G+  L
Sbjct: 180 IYNFRQWRNVSFPRPIYPLVHPEVLVETFEEGRSIQDFIDE-GPRTKLHSQLARLGSSLL 238

Query: 445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLV 504
           LKMLL DNFIH D+HPGN+ V++ +K           P +I LDVGMTAELS+ +R  L+
Sbjct: 239 LKMLLSDNFIHGDLHPGNMFVKLGKK----------VPQLILLDVGMTAELSQRNRYILL 288

Query: 505 EFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQ 564
           E FKA++ +DG   A C L  S+ Q C NP+AF+ +VD  F  + +  G      + + +
Sbjct: 289 ELFKALSDKDGARVARCALEFSEDQTCTNPEAFVGDVDNTFKQYLSVRGT-SKMGDYIAE 347

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYTI 624
           L E+VRR+RVN+DG VCTVMVT ++LEGWQRKLD   ++M  ++ LL KA+W  S  Y +
Sbjct: 348 LFEQVRRYRVNLDGEVCTVMVTVVILEGWQRKLDMSLDIMRMVKELLFKAEWTASFEYVM 407

Query: 625 DGLMAP 630
             + AP
Sbjct: 408 GAIAAP 413


>gi|302847833|ref|XP_002955450.1| hypothetical protein VOLCADRAFT_121422 [Volvox carteri f.
           nagariensis]
 gi|300259292|gb|EFJ43521.1| hypothetical protein VOLCADRAFT_121422 [Volvox carteri f.
           nagariensis]
          Length = 909

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 204/461 (44%), Positives = 287/461 (62%), Gaps = 45/461 (9%)

Query: 211 QFREL-WLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           QFR   W+ ++ RTLE AGPAFIKWGQWAATR DLFP D+C +L  LH++AP HSF YT+
Sbjct: 441 QFRRAEWMELLRRTLEAAGPAFIKWGQWAATRHDLFPPDMCAELERLHTQAPGHSFRYTQ 500

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPI--VVAVKVRHPG 327
             IERAFG  ++E+F+  +  PVASGSI Q+HRA L  +       P    VAVKVRHPG
Sbjct: 501 AAIERAFGMPVNELFESIDRDPVASGSIGQIHRAVLSDKGAAMTGVPAGSTVAVKVRHPG 560

Query: 328 VGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYN 387
           VG +I RDF  +   A ++SV P++K LRL++++ QFA  +  QVDL+REA +L RF +N
Sbjct: 561 VGSAILRDFATMMAVAHLASVAPSLKHLRLEQTLSQFAAPLREQVDLSREANNLRRFNHN 620

Query: 388 FRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKM 447
           FR+ + VSFP P+YPLV P VLVET+E GE ++ Y+     +      L+ +G+  +L+M
Sbjct: 621 FRKTRHVSFPVPLYPLVTPDVLVETFETGEHITAYIQS--DNNPYNHRLSELGSGTMLQM 678

Query: 448 LLVDNFIHADMHPGNILVR-----------------------VAQKKSSQKRLFRSK--- 481
           +LVDN IH+D+HPGNILVR                       VA    ++  L + +   
Sbjct: 679 MLVDNLIHSDLHPGNILVRLDPPGGLLGLLYSALDKVRHLPAVAPANRARIELLQQRWLQ 738

Query: 482 PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ-QNCPNPKAFIEE 540
           P ++ LDVGM  ELS TD+VN+V  F++ A  DGR   + TLR S + Q+CP+P+AF   
Sbjct: 739 PSLVLLDVGMATELSPTDQVNMVGLFRSFAAMDGRACGDWTLRFSGESQSCPDPEAFRLA 798

Query: 541 VDEAF---------AFWGTPE--GDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLV 589
           ++EAF         A  G  E  G   + A+ +  +LE VR+H+V++ G++C V+VTTLV
Sbjct: 799 MEEAFEELHKMDLAAAEGRGEEVGSFKNGADALASVLELVRQHQVSLPGHICAVVVTTLV 858

Query: 590 LEGWQRKLDPGYNVMDTLQTLL--LKADWAKSLSYTIDGLM 628
           LEGW  KLDP ++V+  +Q +   +   W+  +   +D +M
Sbjct: 859 LEGWSNKLDPDHSVLTQVQAMFEPVNVPWSHRIPQLVDRVM 899


>gi|302845228|ref|XP_002954153.1| hypothetical protein VOLCADRAFT_106245 [Volvox carteri f.
           nagariensis]
 gi|300260652|gb|EFJ44870.1| hypothetical protein VOLCADRAFT_106245 [Volvox carteri f.
           nagariensis]
          Length = 699

 Score =  358 bits (920), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 209/479 (43%), Positives = 287/479 (59%), Gaps = 32/479 (6%)

Query: 168 HAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETA 227
           H  V+ + +++V+ V+L  RA YL +LF P+++ AP     G   RE WL +V  TLE A
Sbjct: 178 HLGVSDLAHAVVDEVLLATRAAYLVLLFLPALLTAPLVSLMGGVGRERWLGLVQWTLEHA 237

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGF 287
           GPAFIKWGQWA+TRPDLFP DLC  L  L + AP HS A +   +ERAF   +SE+FD F
Sbjct: 238 GPAFIKWGQWASTRPDLFPEDLCAHLERLQTSAPAHSPATSIAAVERAFRAPISELFDAF 297

Query: 288 EEAPVASGSIAQVHRASLRFR----YPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           +  PVASGSIAQ+H A+L  R      G       VA+KVRHPGV E + RDF+++  AA
Sbjct: 298 DARPVASGSIAQIHAATLSERGAALVGGGAEAGARVAIKVRHPGVSELMHRDFILMQRAA 357

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
              S IPA++ LRL+ES++QF   +  Q+DL+ EAAHL RF  NFR W +V FP P++PL
Sbjct: 358 AACSRIPALRELRLEESIRQFGGPLKEQLDLSVEAAHLQRFNANFRSWGNVKFPLPLFPL 417

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
           V P VLVE++E+G+ ++RYV     H  +   LA  G    L M+L DNFIHAD+HPGNI
Sbjct: 418 VTPDVLVESFEEGDLITRYVRNPHRHNAM---LAQTGVDVFLTMMLRDNFIHADLHPGNI 474

Query: 464 LVRVAQKKSS---------------QKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFK 508
           +V+ A   S                +  L    P V+ LD GM  ELS  D+  L+ FF+
Sbjct: 475 IVKEADPPSPLAARVARWPWLPARIRSWLLDRSPRVVLLDTGMIVELSDCDQSALLGFFR 534

Query: 509 AVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVH----PAECMQQ 564
           A+ + +GRT A   L +S    C +P AF  E+D  F        D  H        ++ 
Sbjct: 535 ALTQMNGRTLAAEILNMSVDGTCKDPAAFAAELDSLFR-----NMDREHLRRESQSVIRD 589

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYT 623
           L+E++R+H+V +  +V TV+VT++VLEGW  KLDP   ++DT++  +L  DW + +  T
Sbjct: 590 LIERMRQHQVTLRPSVSTVVVTSMVLEGWSSKLDPDVRILDTMRD-MLATDWGERIGRT 647


>gi|384253613|gb|EIE27087.1| ABC1-domain-containing protein [Coccomyxa subellipsoidea C-169]
          Length = 401

 Score =  341 bits (874), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 187/406 (46%), Positives = 254/406 (62%), Gaps = 43/406 (10%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKA------PEHSFAYTKKTIERAF 276
           TLE+AGPAFIKWGQWAATR DLFP D C  L +LH++A      P H   +T+  I+RAF
Sbjct: 7   TLESAGPAFIKWGQWAATRHDLFPPDFCTALEQLHTQAILFVQAPAHGLKFTRHAIQRAF 66

Query: 277 GRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYP-GQKVKP-IVVAVKVRHPGVGESIRR 334
              + ++F+ F+  PVASGSI QV+RA L  +      + P  VVAVKVRHPGVGE+I+R
Sbjct: 67  DASVEDLFEEFDAVPVASGSIGQVYRAMLSDKGARNTGIDPGTVVAVKVRHPGVGEAIQR 126

Query: 335 DFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV 394
           DF ++   A+++S++P +  LRL++++ QFA  +  QVDLA EA HL +F YNFR  + V
Sbjct: 127 DFALMMRVARLTSMLPLLSHLRLEDTLSQFAAPLREQVDLALEARHLWQFNYNFRHVRHV 186

Query: 395 SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFI 454
            FP P+YPLV P VLVET+E+GE +SRYV +  G    KS LA +G+ + L+M+L+DN I
Sbjct: 187 RFPFPIYPLVAPEVLVETFEEGEGISRYVAD-PGRSTFKSRLAKLGSSSFLQMMLIDNLI 245

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLD-----VGMTAELSKTDRVNLVEFFKA 509
           H+D+HPGNILV +              P V  L       GM   LS  D+  ++E F+A
Sbjct: 246 HSDLHPGNILVAL------------DSPPVPLLSKRVTGAGMATHLSPEDQGLMLELFQA 293

Query: 510 VARRDGRTAAECTLRLSK-QQNCPNPKAFIEEVDEAFA------FWGTPEGDLVHPAECM 562
            +R DGR   ECTL+ SK  Q CP+P AF EE+ + F        W    G     AE M
Sbjct: 294 FSRLDGREIGECTLKFSKDNQTCPDPTAFKEELQQYFTDIQAEQAWVETNG-----AEAM 348

Query: 563 QQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
             +LE      VN+ G++C V+VTTLVLEGW  +LDP ++V++ ++
Sbjct: 349 SAVLE-----LVNMPGHICAVVVTTLVLEGWSSQLDPRHSVLEQVK 389


>gi|159463666|ref|XP_001690063.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158284051|gb|EDP09801.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 380

 Score =  305 bits (780), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 172/384 (44%), Positives = 238/384 (61%), Gaps = 20/384 (5%)

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGF 287
           GPAFIKWGQWAATR DLFP D+C++L +LH++AP H+F +TK  IE AFG  LSE+F   
Sbjct: 10  GPAFIKWGQWAATRHDLFPPDMCEELEKLHTQAPAHAFRHTKAAIEAAFGVPLSELFTSI 69

Query: 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPI----VVAVKVRHPGVGESIRRDFVIINLAA 343
           E+APVASGSI Q+HRA L  R  G ++  +     VAVKVRHPGVG +I RDF ++ L A
Sbjct: 70  EQAPVASGSIGQIHRAVLSDR--GAELAGMAPGTTVAVKVRHPGVGAAILRDFALMILRA 127

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
              S+       R D S    A  +   VDL+REA +L RF YNFR+ + V FP P+YPL
Sbjct: 128 LACSLPETRTHHRADAST--CACCLSRIVDLSREAHNLRRFNYNFRKTRHVFFPVPLYPL 185

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
           V P VLVE++E GE ++ Y+    G+      L+ +G+  +L+M+LVDN IH+D+HPGNI
Sbjct: 186 VTPDVLVESFEAGEHITHYIQAGDGNP-YNHRLSELGSGTMLQMMLVDNLIHSDLHPGNI 244

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTD-RVNLVEFFKAVARRDGRTAAECT 522
           LVR+                +I+ D+     L     + N+V  F++ A  DGR   + T
Sbjct: 245 LVRLDPPGGMLG--------LIYSDLTDRGHLRLPGLQENMVGLFRSFAAMDGRACGDWT 296

Query: 523 LRLSKQ-QNCPNPKAFIEEVDEAFAFWGTPEG-DLVHPAECMQQLLEKVRRHRVNVDGNV 580
           LR S   Q+CP+P+AF   +    A  G  +     + A+ +  +LE VR+H+V++ G++
Sbjct: 297 LRFSGAGQSCPDPEAFRTAMQMDLAAAGQADSCSFKNGADALAAVLELVRQHQVSLPGHI 356

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVM 604
           C V+VTTLVLEGW  KLDP ++V+
Sbjct: 357 CAVVVTTLVLEGWSNKLDPDHSVL 380


>gi|328874335|gb|EGG22700.1| putative protein serine/threonine kinase [Dictyostelium
           fasciculatum]
          Length = 717

 Score =  304 bits (779), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 170/454 (37%), Positives = 252/454 (55%), Gaps = 47/454 (10%)

Query: 185 LMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDL 244
           L+R + LG++F PSI+ +P      P    LW  ++L ++E +G  +IK+GQW +TRPDL
Sbjct: 233 LLRIVKLGIIFMPSILTSPLL--LIPGGDGLWWRLLLCSIEFSGTCWIKFGQWVSTRPDL 290

Query: 245 FPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRAS 304
           FP  LC+K S LH++ P HSF +TK+TIE  F   L ++F  FE+ P+ASG++AQVH+A 
Sbjct: 291 FPVLLCQKFSLLHNQCPSHSFEFTKETIESNFNSELKDLFVYFEKEPMASGAVAQVHKAV 350

Query: 305 LRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQF 364
           +            VV VKV HP V   I+ DF II  A    S IP +KWL L ES+ +F
Sbjct: 351 IS--------DGSVVVVKVLHPNVKYYIKTDFTIIYTALWAFSKIPGMKWLSLPESILEF 402

Query: 365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVD 424
              MM Q +L +EA+HL+ FI NF+   +V FP+P YPLV   VLVET+E G  + +Y+ 
Sbjct: 403 GKSMMKQANLCQEASHLNTFIDNFKNNNEVVFPRPCYPLVSRDVLVETFEPGTPIMQYIS 462

Query: 425 ELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVR------------------ 466
               +      LA IG  A ++M+LVDNFIHAD+HPGN+LVR                  
Sbjct: 463 TKNPY---NPTLARIGLDAYMQMMLVDNFIHADLHPGNVLVRDSSIPIDHTFYPIFSNNN 519

Query: 467 -VAQKKSSQKRLF-------------RSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR 512
             A    +Q R F              S P +I LDVG+  EL   D+ +  E F  V +
Sbjct: 520 SPAGNNITQNRKFFQLHSIDLVERQKNSLPKLILLDVGLVTELEDQDKSHFKELFVEVVK 579

Query: 513 RDGRTAAECTLRLSKQQNCPNPK--AFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVR 570
            +GR  AE  ++ +++  C   +   F E + + F    + +   VH  + + ++L  VR
Sbjct: 580 GNGRAGAELIIKYAREAQCSEEEMYEFKERMGQIFNHVQSSKLSEVHVGQLLGEILSLVR 639

Query: 571 RHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
            + V ++ N  T+++ T++LEG  ++LDP  +++
Sbjct: 640 EYHVKLESNFATLVMGTIILEGLGKQLDPNLSLL 673


>gi|255089513|ref|XP_002506678.1| predicted protein [Micromonas sp. RCC299]
 gi|226521951|gb|ACO67936.1| predicted protein [Micromonas sp. RCC299]
          Length = 393

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 174/392 (44%), Positives = 235/392 (59%), Gaps = 15/392 (3%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGR-RLS 281
           TLE  G AFIKWGQWA+TR D+FP  LCK+L  L   APEHS+  TK+ +ERA+G  +L 
Sbjct: 7   TLEAGGAAFIKWGQWASTRYDVFPAQLCKELELLQCGAPEHSWRRTKEILERAYGETQLD 66

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPI-----VVAVKVRHPGVGESIRRDF 336
           EIF   ++ P+ASGSIAQ+HRA LR    G++   +      VAVKVRHPGV E++RRDF
Sbjct: 67  EIFAWMDKTPIASGSIAQIHRAKLRNGPLGERPDDVNDEGRYVAVKVRHPGVVEALRRDF 126

Query: 337 VIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF 396
            I+   A+ +  +  +K  +L+ +VQQF V M+ QVDL  EA++L +F   F  W DVSF
Sbjct: 127 AILAWIARATRNVEVLKPFQLEHTVQQFGVHMLQQVDLTTEASNLQKFEKAFSLWGDVSF 186

Query: 397 PKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHA 456
           P PV  L    VLVET+E G   +      +       ALA IG   LLKML+ DNF+HA
Sbjct: 187 PVPVGGLATEEVLVETFEDGAANAAAEAAAEMVPVENRALAAIGVKTLLKMLIDDNFLHA 246

Query: 457 DMHPGNILVRVAQKKSSQ-KRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
           D+HPGNILVR+ +K   + K    SKP ++ LD G+  EL+   + +L EFF+A+   DG
Sbjct: 247 DLHPGNILVRLPEKNDGRGKTKIPSKPEIVILDTGLATELTPAHQASLAEFFQAIINWDG 306

Query: 516 RTAAECTLRLSKQ-QNCPNPKAFIEEVDEAFAFW--GTPEGDLVHPAECMQQLLEKVRRH 572
              A   +  S   Q   +P++F  +V  A   +   TP        +CM  + E V+RH
Sbjct: 307 AGVARNIIAFSSNLQPSFDPESFTSDVTTAVRHFQDSTPRA-----GDCMAAIFETVQRH 361

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
            V +D NV   +VT +VLEGWQ +LDP  N++
Sbjct: 362 HVTLDPNVMVAVVTVMVLEGWQFRLDPSINIL 393


>gi|330841370|ref|XP_003292672.1| hypothetical protein DICPUDRAFT_83271 [Dictyostelium purpureum]
 gi|325077067|gb|EGC30805.1| hypothetical protein DICPUDRAFT_83271 [Dictyostelium purpureum]
          Length = 658

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 171/464 (36%), Positives = 249/464 (53%), Gaps = 49/464 (10%)

Query: 187 RALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFP 246
           R L LG++F P ++  P    F P     W  ++L T++ +G  +IK+GQW +TRPDLFP
Sbjct: 172 RVLQLGLIFLPCLVTFPIC--FIPSINHYWWDLLLNTIQFSGTCWIKFGQWISTRPDLFP 229

Query: 247 RDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLR 306
             LC K S LHS  P H +A+T+K IER FG+ + ++F  FE+ P+ASGS+AQVH+A  R
Sbjct: 230 ELLCDKFSLLHSNCPSHDYAFTEKLIERNFGKSVDQLFLYFEKEPMASGSVAQVHKAVTR 289

Query: 307 FRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV 366
               G+     V  VKV HP V ++I RDF II       S IP +KWL L ESV +F  
Sbjct: 290 ---EGK-----VSVVKVLHPDVKDNINRDFFIIYSLVWAFSHIPEMKWLSLPESVLEFGK 341

Query: 367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDEL 426
            M  Q DL  EA HL+RF  NF+   ++ FPKP+YPLV   VLVE+YE G  +  ++ + 
Sbjct: 342 SMNKQSDLELEANHLNRFNKNFKYNPEIVFPKPIYPLVSKEVLVESYEPGAPIMDFIKKN 401

Query: 427 QGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVA------------------ 468
             H      LA +G  A LKM+L DNF+HAD+HPGN+LVR                    
Sbjct: 402 NKHN---PTLAKMGLSAYLKMMLFDNFVHADLHPGNVLVRTQDEVEPSKILNNALNRKTL 458

Query: 469 --------QKKSSQKRLFR--------SKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR 512
                   +  S  K L++          P +IFLDVG+  +L   D+ + VE F  +  
Sbjct: 459 KALRKRHIEHHSKHKHLYQIDFKENIDPAPKLIFLDVGLVTQLGPQDKDHFVELFTEIVN 518

Query: 513 RDGRTAAECTLRLSKQQNCPNPK--AFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVR 570
            +G+  AE  +R +++  C   +   F E +   F+     +   +H    + ++L  VR
Sbjct: 519 GNGKQGAELLVRYAREAKCTEEELYEFTERMGSLFSKVQNSKLSEIHVGLFLSEILSLVR 578

Query: 571 RHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
            + V ++ N  T+++ T+VLEG  ++LDP   ++      LLK+
Sbjct: 579 EYHVKIESNFATLVMGTIVLEGLGKQLDPSLGLLKAAIPFLLKS 622


>gi|413916890|gb|AFW56822.1| hypothetical protein ZEAMMB73_223297 [Zea mays]
          Length = 531

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 171/362 (47%), Positives = 213/362 (58%), Gaps = 104/362 (28%)

Query: 90  QAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSA 149
           ++Q+AWKRL    S   +  P  S++A A  LA++RS +  P ++AF          ++ 
Sbjct: 68  KSQLAWKRLVALGSRAPKASPIFSKVACAIGLAVSRSNI-APYLVAF----------IAG 116

Query: 150 ETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFG 209
           E   F                                     G+     ++ + + D  G
Sbjct: 117 EINIF-------------------------------------GI-----VVHSKYTD--G 132

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P  R+ W      TLE AGP FIKWGQWAAT PDLFP DLC +LS+LH+KAP H+F YTK
Sbjct: 133 PICRDSW-----HTLELAGPVFIKWGQWAATHPDLFPSDLCTELSKLHTKAPAHNFTYTK 187

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329
           KT+E+AFGR+LS+IF   EE PVASGS+AQVHRA L+FRYP ++ K + VAVK       
Sbjct: 188 KTVEKAFGRKLSDIF---EEDPVASGSVAQVHRAVLQFRYPNRQTKRVTVAVK------- 237

Query: 330 ESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFR 389
                                             FAVFMMS+VDLAREAAHLSRFIYNFR
Sbjct: 238 ----------------------------------FAVFMMSEVDLAREAAHLSRFIYNFR 263

Query: 390 RWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLL 449
           RWKDVSFP+P+YP VHPA+LVETYE GE VSRYVD+L+GH+R+KSALAH GTHALLKMLL
Sbjct: 264 RWKDVSFPRPLYPHVHPAILVETYEHGESVSRYVDDLEGHDRIKSALAHTGTHALLKMLL 323

Query: 450 VD 451
           ++
Sbjct: 324 ME 325


>gi|66827891|ref|XP_647300.1| hypothetical protein DDB_G0267774 [Dictyostelium discoideum AX4]
 gi|74859462|sp|Q55G83.1|ABKC_DICDI RecName: Full=Probable serine/threonine-protein kinase abkC
 gi|60475405|gb|EAL73340.1| hypothetical protein DDB_G0267774 [Dictyostelium discoideum AX4]
          Length = 689

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 173/494 (35%), Positives = 261/494 (52%), Gaps = 71/494 (14%)

Query: 179 VECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWA 238
           +  V + +R L LG++  PS++  P    F P  +ELW  ++L T++ +G  +IK+GQW 
Sbjct: 151 INLVKIGIRVLELGLILLPSVLTFPCC--FIPGVKELWWQLLLETIQFSGTCWIKFGQWI 208

Query: 239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAPVASGSI 297
           +TRPDLFP  L +K S+LHS+ P HSF +T ++IE +F G+ + ++F  F+E P+ASGS+
Sbjct: 209 STRPDLFPDLLIEKFSQLHSQCPSHSFQFTNESIENSFNGKSIKDLFLWFDEEPMASGSV 268

Query: 298 AQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRL 357
           AQVH+A       G+     V  VKV HP V  +I+RDF II       S IP +KWL L
Sbjct: 269 AQVHKA---LTMDGK-----VAVVKVLHPNVKSNIKRDFFIIYSLIWAFSHIPEMKWLSL 320

Query: 358 DESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGE 417
            ES+ +F   MM Q DL  EA+HL+RF  NF+   +V FPKP+YPLV   VLVE++E G 
Sbjct: 321 PESILEFGKSMMKQADLELEASHLNRFNSNFKYNSEVIFPKPLYPLVSKEVLVESFEPGS 380

Query: 418 CVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQK---KSSQ 474
            +  ++ +   H      LA IG  A ++M+LVDNF+HAD+HPGN+LVR +     KS  
Sbjct: 381 PIMDFIKKNDHH---NPTLAKIGLSAYMQMMLVDNFVHADLHPGNVLVRTSDDDNFKSID 437

Query: 475 KRLFR----------------------------------------------------SKP 482
              F+                                                    S P
Sbjct: 438 NNYFKKYNNDNDQQQQQQYNLPFKRKLYDTIEKSHKKFDSMLGGIQLKSIDFKEHQKSSP 497

Query: 483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKA--FIEE 540
            +IFLDVG+  +L + D+ + +E F  +   +G+  AE  +R +++  C   +   F E 
Sbjct: 498 KLIFLDVGLVTQLGQQDKDHFIELFTEIVNGNGKEGAELLIRYAREAKCTEEEMYQFKER 557

Query: 541 VDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPG 600
           +   F      +   VH  + M ++L  VR + V ++ N  T+++ T+VLEG  ++LDP 
Sbjct: 558 MGTLFNQVQNSKLSEVHVGQFMSEILGLVREYHVKIESNFATLVMGTIVLEGLGKQLDPS 617

Query: 601 YNVMDTLQTLLLKA 614
             ++      LLK+
Sbjct: 618 LGLLKAAIPFLLKS 631


>gi|145353783|ref|XP_001421181.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581418|gb|ABO99474.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 532

 Score =  298 bits (762), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 170/424 (40%), Positives = 247/424 (58%), Gaps = 37/424 (8%)

Query: 213 RELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTI 272
            ELW  ++ R LE +GPAFIKWGQWA+TR D+FP  LC++L  L + APEHS+  TK  +
Sbjct: 65  NELWYGLLRRILEASGPAFIKWGQWASTRYDVFPAALCRELERLQAGAPEHSWKETKAIL 124

Query: 273 ERAFG-------RRLSEIFDGFEEAPVASGSIAQVHRASL--------RFRYPGQKVKPI 317
           ER++G        +  EIF+ F+E  +ASGS+AQ+HRA L        R R  GQK +  
Sbjct: 125 ERSYGVGADGKLNKFEEIFEWFDEKVLASGSVAQIHRARLKPGRLVNGRIRRGGQKRE-- 182

Query: 318 VVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLARE 377
            VAVKVRHPGV +++ RDF I+   A +S  I  ++ L+L+ ++QQF V M+ QVD   E
Sbjct: 183 -VAVKVRHPGVVDALTRDFEILVWMAGLSKSIKWLEPLQLENTIQQFGVHMLQQVDFRHE 241

Query: 378 AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYV------DELQGHER 431
           A +L +F  +F     +SFP P+  L    +LVETYE+G  ++ Y+       E+ G E+
Sbjct: 242 ADNLDKFRKSFLLMPAISFPTPIPGLATEEILVETYEEGVSIASYLLSPEADKEMLGSEQ 301

Query: 432 LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGM 491
            K+ LA +G   L KML+ DNF+HAD+HPGNILVR+    +S   L  + P +I LD G+
Sbjct: 302 NKT-LAGLGVKTLFKMLIDDNFLHADLHPGNILVRLPNGSTST--LSDASPEIIILDTGL 358

Query: 492 TAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNC----PNPKAFIEEVDEAFAF 547
              L+   + +L + F A+   DG T A+  L  +          + +A I +  + F+ 
Sbjct: 359 ATRLTPFHQASLAKMFHAIVTWDGSTVADSILSFADNVKANVDYTDFRADIAKAVDQFSS 418

Query: 548 WGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
             TP        ECM  + E V+++ + +D NV   +VT +VLEGWQ +LDP  N++D L
Sbjct: 419 -TTPRA-----GECMGAIFETVQKYHLCLDPNVMIAVVTVMVLEGWQWRLDPTVNILDYL 472

Query: 608 QTLL 611
             +L
Sbjct: 473 DDVL 476


>gi|303284024|ref|XP_003061303.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457654|gb|EEH54953.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 564

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 177/452 (39%), Positives = 254/452 (56%), Gaps = 25/452 (5%)

Query: 177 SLVECVILLMRALYLGVLFSPSIMMAPFADS--FGPQFRELWLHVVLRTLETAGPAFIKW 234
           +LVE  +  +RA++L  LF P I  APF  S   G      W  ++  TLE AG AFIKW
Sbjct: 67  ALVENTLTTLRAIHLSFLFFPVIFTAPFLLSKLAGEWGDAAWYRLLRVTLERAGAAFIKW 126

Query: 235 GQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG--RRLSEIFDGFEEAPV 292
           GQWA+TR D+FP  LC++L EL + APEHS+A T++ +ERA+G    + +IF   +  P+
Sbjct: 127 GQWASTRYDVFPAQLCRELEELQANAPEHSYAKTRQILERAYGGAEVVDQIFMWVDPTPI 186

Query: 293 ASGSIAQVHRASLRFRYPG-QKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPA 351
           ASGSIAQ+HRA LR      +  +   VAVKVRHPGV E ++RDF I+   A  ++ I  
Sbjct: 187 ASGSIAQIHRAKLRAGARAREDAEGRFVAVKVRHPGVVEVLKRDFAILMWLANATNKIEF 246

Query: 352 VKWLRLDESVQQFAVFMMSQ-----------VDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           +   +L+ +VQQF V M+ Q           VDL  EA++L RF   F  W  VSFP PV
Sbjct: 247 LAPFQLEHTVQQFGVHMLQQARSIHRSPYDRVDLTTEASNLRRFKDCFSLWPTVSFPTPV 306

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
             L    VL+ET+E G   +  +      E   S LA +G   LLKML+ DNF+HAD+HP
Sbjct: 307 CGLAKEEVLIETFEDGNAAAAAMATFVPEE--NSVLAALGVKTLLKMLIDDNFLHADLHP 364

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNIL   A  K + +     +P +I LD G+  EL+   + +L EFF+++   DG   A 
Sbjct: 365 GNIL---AATKGAGRLPKGGRPEIIILDTGLATELTPHHQASLAEFFQSIIDWDGVGVAN 421

Query: 521 CTLRLSKQQN-CPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
             +  S   +   + + F +++  A + +           +CM  + E V+++ V +D N
Sbjct: 422 NIISFSSNLSPTLDTEGFRQDISAAVSQFSESS---PRAGDCMNAIFETVQKYHVTIDPN 478

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V   +VT +VLEGWQ +LDP  N+MD +  ++
Sbjct: 479 VMVAVVTVMVLEGWQFRLDPSINIMDHIAEVM 510


>gi|297745655|emb|CBI40866.3| unnamed protein product [Vitis vinifera]
          Length = 186

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 127/141 (90%), Positives = 137/141 (97%)

Query: 490 GMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWG 549
           GMTAELSK+D+VNL+ FFKAVARRDGRTAAEC LRLSKQQNCPNPKAFI+EV+E+F+FWG
Sbjct: 46  GMTAELSKSDQVNLLGFFKAVARRDGRTAAECALRLSKQQNCPNPKAFIKEVEESFSFWG 105

Query: 550 TPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQT 609
           TPEGD VHPAECMQQLLEKVRRH+VN+DGNVCTVMVTTLVLEGWQRKLDPGYNVM TLQT
Sbjct: 106 TPEGDSVHPAECMQQLLEKVRRHKVNIDGNVCTVMVTTLVLEGWQRKLDPGYNVMQTLQT 165

Query: 610 LLLKADWAKSLSYTIDGLMAP 630
           LLL+ADWAKSLSYTIDGLMAP
Sbjct: 166 LLLRADWAKSLSYTIDGLMAP 186


>gi|336455054|ref|NP_001229590.1| aarF domain containing kinase 2-like [Strongylocentrotus
           purpuratus]
          Length = 591

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 162/494 (32%), Positives = 262/494 (53%), Gaps = 51/494 (10%)

Query: 168 HAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETA 227
           H  + ++  +LV+ V++ +R +   +LF P +   P    F  + +++WL  +LR++E +
Sbjct: 98  HHVLRTLASNLVQFVLVSLRYIRNSILFGPLLFSYPLVLLFPDRLQDVWLRALLRSIELS 157

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF--- 284
           GP FIK GQWA+TR DLF +D C +LS+LH  AP HS  YTK+ +E AFG    EIF   
Sbjct: 158 GPTFIKLGQWASTRRDLFSQDFCDQLSKLHRNAPSHSVEYTKRALEHAFGLLGKEIFRLE 217

Query: 285 DGFEEAPVASGSIAQVHRASLR-----------------FRYPGQKVKPIV-------VA 320
            G E   V SG + QVH+A +R                 +R   +   PI+       VA
Sbjct: 218 SGNET--VYSGCVGQVHKAYMRPDVYQAVMKGREGGLRDWRMRDRASDPIMDEEKWIPVA 275

Query: 321 VKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAH 380
           VKV HPG+ ES+  D  IIN+ A+I ++IP + WL   + V +F   M +Q++L  EA +
Sbjct: 276 VKVLHPGIYESVHLDLRIINVFARILNLIPGLHWLSPVDLVDEFESLMKNQINLKLEAEN 335

Query: 381 LSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYV--DELQGHER-LKSALA 437
           L RF  NF +   V  P+PV+P V   +LVET+E G+ +S ++  D     E+ +K  LA
Sbjct: 336 LERFHQNFSKVPHVRIPQPVWPFVTNEILVETFESGQSISAFISCDPDNPDEKGIKKILA 395

Query: 438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQK-------------RLFRSKP-- 482
            +G   +LKM+ VDNF+HAD+HPGNILV+  ++   Q              +++  +P  
Sbjct: 396 QMGVDVILKMVFVDNFVHADLHPGNILVQGVEEALVQPSRTVDFHDHITEFQVYLKEPKN 455

Query: 483 --HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEE 540
              ++ LD G+T+ L + D  N  + F A+  R G   AE     +    C + + F  +
Sbjct: 456 PIKLVLLDTGITSHLEERDFNNFYKVFTAIVLRKGDVVAELFAEHASSNECNDVEKFKAD 515

Query: 541 VDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLD 598
           +      A   + +   +   + +++L   +  H+V ++ N  ++++  +VLEG  R LD
Sbjct: 516 MKSLVEKAHERSLQLSKMQVGQLLRELFALMIHHKVKLESNFASIILAIMVLEGLGRSLD 575

Query: 599 PGYNVMDTLQTLLL 612
           P  +++   + +LL
Sbjct: 576 PNLDILKAAKPVLL 589


>gi|428185100|gb|EKX53953.1| hypothetical protein GUITHDRAFT_49514, partial [Guillardia theta
           CCMP2712]
          Length = 451

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 170/468 (36%), Positives = 241/468 (51%), Gaps = 59/468 (12%)

Query: 184 LLMRALYLGVLFSPSIMMAPFADSFGPQFRE-LWLHVVLRTLETAGPAFIKWGQWAATRP 242
           LL+RA+YL  ++    + +P A    P FR+ +W   +  +L  +G AFIKWGQWA+ RP
Sbjct: 2   LLLRAIYLSFIYFLPFVTSPLA-LLVPSFRDHVWYKFLTMSLGHSGAAFIKWGQWASVRP 60

Query: 243 DLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHR 302
           D+FP  LC  LS LHS AP+HS+ +TK+ +ERA G  +   F+ F+    ASGSIAQVH 
Sbjct: 61  DIFPLKLCDVLSHLHSNAPKHSWKHTKQEVERALGCSIERYFERFDREAFASGSIAQVHF 120

Query: 303 ASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ 362
           A+    + GQK     +AVKVRHP V E I  DF I+         IP + WL L+ S++
Sbjct: 121 AT----HNGQK-----LAVKVRHPNVKEQIASDFRIMRAFGSFVDSIPGLHWLNLEASME 171

Query: 363 QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV-SFPKPVYPLVHPAVLVETYEQGECVSR 421
           QF+  + SQ  L  EA HL  F  NFR  + +  FPK V+     +VLVET+E+G   + 
Sbjct: 172 QFSHTIASQTRLDVEANHLDIFNDNFRAQRQICGFPKAVF--CSESVLVETFEEGSLATH 229

Query: 422 YVDEL-------------------------------QGHERLKSALAHI----GTHALLK 446
            V  +                               +  E   S+  H     G    L+
Sbjct: 230 MVLPINRAKARKSRSWWPLGSLSSLLHSCLRCFHVEEEMEETLSSTGHFIVAKGEDMYLQ 289

Query: 447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEF 506
           MLL DN +HAD+HPGNIL+   Q  +S        P +I LD GM A+L   ++ N +  
Sbjct: 290 MLLKDNLMHADLHPGNILL---QHNNS----LHHNPKIILLDAGMVAQLKADEQDNFIGL 342

Query: 507 FKAVARRDGRTAAECTLRLSKQQNCPNP---KAFIEEVDEAFAFWGTPEGDLVHPAECMQ 563
            KA+ + DG  AA+  LR S  Q C +P   + F +++   FA      G  VH    ++
Sbjct: 343 LKAIGKGDGSMAADFILRFSCNQTCTSPELVELFRQDMVRLFAEHCRGYGHGVHIGNVLR 402

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +L+ +R H+V VD N  T+++  L LEG      P YN++D  + LL
Sbjct: 403 LILQTLRVHKVRVDVNYVTLVLNILCLEGLASAFQPDYNLLDGARPLL 450


>gi|219124891|ref|XP_002182727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406073|gb|EEC46014.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 402

 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 151/415 (36%), Positives = 227/415 (54%), Gaps = 26/415 (6%)

Query: 210 PQFRE-LWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYT 268
           P+FR  +W   +   +  +G A+IKWGQW++TR D+FP   C++L+ LH+ AP H + ++
Sbjct: 1   PRFRNNVWYSWLTTCIGQSGAAWIKWGQWSSTRNDMFPDAFCEQLATLHAAAPAHKWKFS 60

Query: 269 KKTIERAFG---RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325
           ++T+E + G     L ++FD  +  P+ASGSIAQ+H+A L  +          +AVK+RH
Sbjct: 61  EQTLESSLGIAPGSLLQVFDEIDPVPLASGSIAQIHKAVLDGKS---------MAVKIRH 111

Query: 326 PGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFI 385
           P V   I  DF ++  AA +   IPA+ WLR+ ESV+QF+  M +Q  L  EA HL    
Sbjct: 112 PNVAALIDMDFRLMKAAATLLDAIPALSWLRIRESVEQFSHTMAAQAYLHVEAHHLEVLN 171

Query: 386 YNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYV---DELQGHERLKSALAHI--- 439
           YNFR W  V FP P Y     AV++ET+EQG+  +      D++QGHE +   +A     
Sbjct: 172 YNFRSWPHVRFPHPFY--ASSAVIMETFEQGQICTEIFDMYDDVQGHELIPLKMAQFLVT 229

Query: 440 -GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKT 498
            G    LKMLLVDN +HAD+HPGNI+V         ++L   K  +  +D GM A+L+  
Sbjct: 230 NGVALYLKMLLVDNLMHADLHPGNIMVDCHFMSDPNQKL--GKFRIALVDAGMVAQLTDK 287

Query: 499 DRVNLVEFFKAVARRDGRTAAECTLRLS--KQQNCPNPKAFIEEVDEAFAFWGTPEGDLV 556
           +    +    ++   DG+ AAE  L+ S     N     AF E++   FA      G  V
Sbjct: 288 ESSTFIGLLASLGEGDGQQAAEFALQFSLENHMNETQRSAFTEDMVTMFAERCRGYGTGV 347

Query: 557 HPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
                ++ +L  +R H+V +D N  T++V  L +E    ++ P YNV+D  + LL
Sbjct: 348 DVGYVLRGVLGLIRDHKVRIDANFATLVVNCLCIESLAARVCPSYNVLDAARPLL 402


>gi|302920073|ref|XP_003052994.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733934|gb|EEU47281.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 690

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 172/523 (32%), Positives = 255/523 (48%), Gaps = 104/523 (19%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFREL---------WLHVVLRTLETAG 228
           +VE V   +R L L V+F P I+  P A  FG + R+          W   ++  +E AG
Sbjct: 121 IVEPVCTGIRFLQLVVIFVPVIITVP-AIWFGRRQRDRDNERTGTLWWYGFLVNAMELAG 179

Query: 229 PAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSEIFDGF 287
           PAFIK GQWAA+R D+FP ++C+ +S+LHS AP HS   T+KT+E AFG R   +IFD F
Sbjct: 180 PAFIKLGQWAASRTDIFPTEMCEIMSKLHSNAPAHSMHATRKTVEAAFGGRAFEDIFDEF 239

Query: 288 EEAPVASGSIAQVHRASLR------------------------------FRYPGQKVKPI 317
            E P+  G+IAQV++A L+                               +   Q+V   
Sbjct: 240 HEKPLGVGAIAQVYKAKLKPDLARPDEIDAQDNPLHPLAHNVLRNVDTVLKSSPQRVPSS 299

Query: 318 VVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLARE 377
            VAVKV HP V  ++RRD  I++  A   ++IP ++WL L + V QF   M  Q+DL  E
Sbjct: 300 YVAVKVLHPNVERTVRRDLRIMHFFASALNIIPTIEWLSLPDEVAQFGEMMKLQLDLRIE 359

Query: 378 AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALA 437
           AA+L+ F  NF+     SFP P        VL+E + QG  ++ +++   G    +  +A
Sbjct: 360 AANLAIFRKNFKERSTASFPYPYTDFTTRNVLIEEFAQGIPLADFIE--NGGGVFQHDIA 417

Query: 438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRS----------------- 480
             G  A L+MLL+DNF+HAD+HPGNI+VR  Q    + RL ++                 
Sbjct: 418 DEGLDAFLRMLLLDNFVHADLHPGNIMVRFYQSAHPELRLRKTMSKAHPDEQDDVTEQVL 477

Query: 481 ---------------------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARR 513
                                      +P +IF+D G+  EL+  +R N ++ F+AVA  
Sbjct: 478 ERLRPYRHRKDPAAWQAELVKIDAEGFRPQLIFIDTGLVTELNSVNRTNFLDLFRAVAEF 537

Query: 514 DGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF------WGTPEGDL----VHPAECMQ 563
           DG  A          + C  P A ++E  E FA        G     L    V   + +Q
Sbjct: 538 DGYKAGHLMC-----ERCRQPDAVLDE--EVFALKMQHLVLGVKSRTLALGNVKIGDILQ 590

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           Q+L  VR H V ++G+   V+++ L+LEG  R L+P  +++ +
Sbjct: 591 QVLSMVRNHHVRLEGDFVNVVISILLLEGIGRSLNPDVDLLSS 633


>gi|384251732|gb|EIE25209.1| ABC1-domain-containing protein [Coccomyxa subellipsoidea C-169]
          Length = 411

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 154/408 (37%), Positives = 225/408 (55%), Gaps = 24/408 (5%)

Query: 219 VVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGR 278
           ++L  +  +G AFIKWGQW+ATR DLFP+D+C  L+ELH +AP HS+  +K  IE AFG+
Sbjct: 6   LLLFGIRNSGAAFIKWGQWSATREDLFPQDVCMVLAELHDRAPVHSWEASKVQIEEAFGK 65

Query: 279 RLSEIFDGFEEAPVASGSI------AQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESI 332
            + E+FD  + A +ASGSI      AQVHRA L+        +P  V VKVRHP V  +I
Sbjct: 66  PVEELFDSIDHAALASGSIAQAFVCAQVHRAVLQL-----GGEPRQVVVKVRHPNVARNI 120

Query: 333 RRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWK 392
             DF ++   A  +S +P++K L L ES+ QF+  M +Q DL  EA HL RF  NF   +
Sbjct: 121 TIDFRLLKPVAAAASRVPSLKGLSLKESLAQFSANMTAQTDLRVEAVHLRRFYNNFAAVR 180

Query: 393 -DVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVD 451
             V+ P PV  +   AVLVET+E GE V++Y+ +   +    + +  +G    LKMLL D
Sbjct: 181 SSVTPPLPVPGMATEAVLVETFEAGESVAKYIRQPSPY---NTQIVALGVDTYLKMLLHD 237

Query: 452 NFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVA 511
           NF+H D+HPGNILVR  +   SQ  + ++    I LD G+  EL+   R + + F  A++
Sbjct: 238 NFVHTDLHPGNILVR-GRYGYSQLVMLQNLVQ-ILLDFGLAEELTPRVRKHFISFLHAIS 295

Query: 512 RRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAF----AFWGTPEGDLVHPAECMQQLLE 567
           + DG       L   K Q CP+P AF  ++   F      +     D+    + ++  L 
Sbjct: 296 KGDGAAGTRHMLAFGKAQTCPDPAAFQHDMTAMFRRECNIYSKAGVDV---DQVLKSALH 352

Query: 568 KVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKAD 615
             R+H V +D +   ++V   V+ G+   LDP  N++D   +     D
Sbjct: 353 LARKHEVVIDSSYAALVVGVCVIVGFATALDPALNLIDAATSAFFIND 400


>gi|159489771|ref|XP_001702868.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158270996|gb|EDO96825.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 372

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 160/384 (41%), Positives = 222/384 (57%), Gaps = 19/384 (4%)

Query: 227 AGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDG 286
           +G AFIKWGQWAATR DLFP D C  L+ LH +AP HSFA+T+K +ER+FG  L  +F+ 
Sbjct: 1   SGAAFIKWGQWAATRVDLFPDDFCDTLANLHDRAPTHSFAFTRKQVERSFGLALERMFES 60

Query: 287 FEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKIS 346
           FE+ PVASGSIAQ+HRA +R    G     + VAVKV HP V   IR+DF ++  AA   
Sbjct: 61  FEQQPVASGSIAQIHRAVMR----GSDGSRLQVAVKVVHPRVALRIRQDFALLRPAAAAL 116

Query: 347 SVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRR-WKDVSFPKPVYPLVH 405
             + +++ L L E+V QF+  M +Q DL  EAAHL RF  NF      V+ P+P+  LV 
Sbjct: 117 GRLRSLRSLSLPETVSQFSATMTAQADLRVEAAHLRRFYANFAAVAAHVTTPRPLPGLVR 176

Query: 406 PAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILV 465
           P V+VET+E G  VS Y+     H  L   +  +G    LKMLL DNF+H D+HPGNI+V
Sbjct: 177 PEVMVETWEDGRSVSHYIR--YPHPSLNGRVVCLGLDTYLKMLLQDNFVHTDLHPGNIMV 234

Query: 466 RVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR- 524
           R    +SS+    R+   ++ LD G+  ELS   R + + F + + R DG  AA   LR 
Sbjct: 235 RA--NRSSRSSCRRAGVQLVLLDFGLAEELSPVVRHHFISFLQHLLRGDGVAAAGHLLRW 292

Query: 525 LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL-----VHPAECMQQLLEKVRRHRVNVDGN 579
            S++Q C +P A   ++    A   T + DL     +   + M+ +L   R+H V +D  
Sbjct: 293 TSRRQACADPAALTADM---VALAAT-QCDLRSEEGIDLDKVMKDVLRLARKHGVTIDSC 348

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNV 603
              +++   V+ G+   LDPG N+
Sbjct: 349 YAALVIAVCVIVGFATSLDPGVNL 372


>gi|320588255|gb|EFX00730.1| ubiquinone biosynthesis protein [Grosmannia clavigera kw1407]
          Length = 704

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 175/545 (32%), Positives = 266/545 (48%), Gaps = 115/545 (21%)

Query: 186 MRALYLGVLFSPSIMMAP---FADSFGPQFRE-----LWLHVVLRTLETAGPAFIKWGQW 237
           +R + L  +F P + MAP          +  E     LW  V+++ +E AGP FIK GQW
Sbjct: 136 LRLVQLSCIFVPVLAMAPCIWMGRRRRDRDNERVGALLWYRVLVKAMELAGPTFIKLGQW 195

Query: 238 AATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSI 297
           AA+R D+FP ++C  +S+LHS AP HS   T+ T+E AFG R+ EIFD F+  P+  G+I
Sbjct: 196 AASRSDIFPTEMCAVMSKLHSDAPAHSIRQTRLTVETAFGGRMDEIFDEFDVEPLGVGAI 255

Query: 298 AQVHRASLRFRYPG--------------------------QKVKPIV-----------VA 320
           AQV++A LR   P                           ++V+P++           VA
Sbjct: 256 AQVYKARLRPAGPNTRANRDSEEEEASHNHSDKYGLENVRRRVEPLIKSTPQRVPSSYVA 315

Query: 321 VKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAH 380
           VKV HPGV  ++RRD  I+   A + + +P ++WL L + V QF   M  Q+DL  EAA+
Sbjct: 316 VKVLHPGVERTVRRDLRIMGFFAAVLNAVPTMEWLSLPDEVAQFGEMMRLQLDLRIEAAN 375

Query: 381 LSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIG 440
           L+ F  +FR     SFP P        VLVE + QG  +S ++D   G    +  +A  G
Sbjct: 376 LTIFRRHFRDRTTASFPFPHPEFTTRNVLVEEFAQGLPLSAFID--NGGGVFQHEIASEG 433

Query: 441 THALLKMLLVDNFIHADMHPGNILVRVAQ----------KKSSQKR-------------L 477
             A  +MLL+DNF+HAD+HPGNI+VR  Q          +  SQK              L
Sbjct: 434 LDAFFRMLLLDNFVHADLHPGNIMVRFYQAARPDLSLSGRAESQKSPKPQEQPDVTEQVL 493

Query: 478 FRSKPH----------------------VIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
            R +PH                      +IF+D G+  +L++T+R N ++ F+AVA  DG
Sbjct: 494 ARLRPHFHDKVAWQAELARIDHEGFRPQLIFIDTGLATQLNETNRRNFLDLFRAVAEFDG 553

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF----------WGTPEGDLVHPAECMQQL 565
             A +        + C  P+A ++E  + FA             T     V   + +QQ+
Sbjct: 554 YRAGQLMC-----ERCRQPEAVLDE--DVFALKMQHLVLSVKSRTLALGNVRIGDILQQV 606

Query: 566 LEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK------ADWAKS 619
           L  VR H V ++G+   ++++ L+LEG  R LDP  +++     +L +      AD+ K+
Sbjct: 607 LGMVRGHHVRMEGDFVNIVLSILLLEGIGRSLDPDIDLLSASLPILRQLSAQSGADFVKA 666

Query: 620 LSYTI 624
             +++
Sbjct: 667 GDFSM 671


>gi|299473725|emb|CBN78118.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 663

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 161/442 (36%), Positives = 230/442 (52%), Gaps = 61/442 (13%)

Query: 212 FRE-LWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKK 270
           FRE +W   +  ++  +G AFIKWGQW++TRPD+FP  LC+ LS LH  AP H  A+TKK
Sbjct: 54  FREKVWYRALTYSIGKSGTAFIKWGQWSSTRPDMFPEGLCESLSVLHKGAPSHKLAHTKK 113

Query: 271 TIERAFGRR-LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329
            +ERA+G R +SE+F  FE  P+ASGSIAQ+H+A L            VVAVKVRHP V 
Sbjct: 114 LVERAYGGRPISEVFAWFESKPIASGSIAQIHKAILNGE---------VVAVKVRHPMVK 164

Query: 330 ESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFR 389
           E +  DF+++   A  +   P++KW+ L  S++QF+  M +Q DL  EA +L+ F  NF 
Sbjct: 165 ERMFLDFLLMKKIASFADRNPSLKWMNLGPSMEQFSNTMSAQTDLVLEAKYLNEFNLNFN 224

Query: 390 R--WKDVSFPKPVYPLVHPAVLVETYEQGECVSRYV------------------------ 423
              W D +FP  ++ +    VLVET+E+G  V+ Y                         
Sbjct: 225 GEAWSDCAFPTVIHCV--EDVLVETFEEGIVVAEYAKLFAKTSRDKNVGLWERGLTKLLG 282

Query: 424 -------DELQGHERLKSALAHI----GTHALLKMLLVDNFIHADMHPGNILVRVAQKKS 472
                  + L+G E+   AL H     G    LKM+L D  +HAD+HPGNILV   +  +
Sbjct: 283 RPSRQRENSLEG-EKPDPALGHFIVTRGEDMWLKMVLNDGLLHADLHPGNILVHAPKDGT 341

Query: 473 SQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCP 532
           S  RL       + +D GM A+L    + + V   + +   DG  A +  L+ S +Q C 
Sbjct: 342 SAPRL-------VLVDAGMVAKLYGHQQRHFVRLLECLGSGDGIAAGQAVLQFSTKQTCV 394

Query: 533 NP---KAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLV 589
                 AF+ E+D  F          V     ++ +L  VRRH V VD    T+++  L 
Sbjct: 395 GEHEQAAFLAEMDSVFKEKCRGYHTNVDVGNILRGVLTCVRRHSVRVDVEYATLILNILC 454

Query: 590 LEGWQRKLDPGYNVMDTLQTLL 611
           L+G  + L P YN++D  Q+LL
Sbjct: 455 LDGMSKVLLPTYNILDGAQSLL 476


>gi|322697382|gb|EFY89162.1| ubiquinone biosynthesis protein, putative [Metarhizium acridum CQMa
           102]
          Length = 654

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 169/521 (32%), Positives = 250/521 (47%), Gaps = 104/521 (19%)

Query: 180 ECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE---------LWLHVVLRTLETAGPA 230
           E V    R L+L  +F P I+  P A   G +  E          W   +++ +E AGPA
Sbjct: 87  EPVCTGFRFLHLLAIFVPVIITVP-AIWIGKRRPERDNERSGTLWWYEFLVKAMELAGPA 145

Query: 231 FIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEE 289
           FIK GQWAA+R D+FP ++C  +S+LHS AP HS   T++T+  AF GR  ++IFD F+E
Sbjct: 146 FIKLGQWAASRTDIFPNEMCDTMSKLHSNAPAHSMHATRRTVSAAFGGRDFNDIFDEFDE 205

Query: 290 APVASGSIAQVHRASLR------------------------------FRYPGQKVKPIVV 319
            P+  G+IAQV++A L+                               +   ++V    V
Sbjct: 206 KPLGVGAIAQVYKAKLKPELATSKGGMNGSEGYGGLSENVRRNVETVLKSSPKRVPSSYV 265

Query: 320 AVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAA 379
           AVKV HP V   +RRD  I++  A I + IP ++WL L   V QF   M  Q+DL  EAA
Sbjct: 266 AVKVLHPRVERIVRRDLKIMHFFASILNAIPTIEWLSLPGEVAQFGEMMKLQLDLRIEAA 325

Query: 380 HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHI 439
           +L RF  NF+     SFP P        VL+E + QG  ++ +++   G    +  +A  
Sbjct: 326 NLERFRRNFKDRTTASFPYPYTDFTTRNVLIEEFAQGIPLADFME--NGGGVFQHDIADE 383

Query: 440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRS------------------- 480
           G  A L+MLL+DNF+HAD+HPGNI+VR  Q    + RL +                    
Sbjct: 384 GLDAFLRMLLLDNFVHADLHPGNIMVRFYQAAQPELRLLKKPDRNAHDQEADVTEKVLER 443

Query: 481 -------------------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
                                    +P +IF+D G+  EL+ T+R N ++ F+AVA  DG
Sbjct: 444 LRPFRRRKNKAAWEAELAKIDAEGYRPQLIFIDTGLVTELNATNRANFLDLFRAVAEFDG 503

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF------WGTPEGDL----VHPAECMQQL 565
             A          + C  P+A +E+  E FA        G     L    V   + +QQ+
Sbjct: 504 YKAGHLMC-----ERCRQPEAVLEK--EVFALKMQHLVLGVKSRTLALGNVKIGDILQQV 556

Query: 566 LEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           L  VR H V ++G+   V+++ L+LEG  R L+P  +++ +
Sbjct: 557 LSMVRNHHVRLEGDFVNVVISILLLEGIGRSLNPDVDLLSS 597


>gi|347840295|emb|CCD54867.1| similar to ubiquinone biosynthesis protein [Botryotinia fuckeliana]
          Length = 736

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 179/542 (33%), Positives = 260/542 (47%), Gaps = 121/542 (22%)

Query: 173 SVLYSLVECV----ILLMRALYLGVLFSPSIMMAPFADSFGPQFREL-----------WL 217
           S++Y L  C+       +R L+L V+F P ++  P A  FGP  R++           W 
Sbjct: 120 SIIYFLDACLWEPLCTSIRFLHLVVIFVPVLVTIP-AAYFGP--RDITRDNERMGTLWWY 176

Query: 218 HVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF- 276
             +++ +E AGPAFIK GQWAA+R D+FP  +C+ +S+LHS AP HS   TK+ I RAF 
Sbjct: 177 RFLVKAMERAGPAFIKLGQWAASRSDIFPSQMCEIMSQLHSNAPAHSLHATKRIISRAFD 236

Query: 277 GRRLSEIFDGFEEAPVASGSIAQVHRASLR--FRYPG----------------------- 311
           GR   +IF+ F+E P+  G+IAQV++A L+     PG                       
Sbjct: 237 GRPFDDIFEEFQEQPLGVGAIAQVYKAKLKPDLATPGDPDLQEPTNIRKNVRKNVDTLIK 296

Query: 312 ---QKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368
              Q+V    VA+KV HPGV   +RRD  I+ + A + ++IP  +WL   + V+QF   M
Sbjct: 297 STPQRVPSSYVAIKVLHPGVERVVRRDLRIMWVFASVINLIPTFEWLSFPDEVEQFGQMM 356

Query: 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG 428
             Q+DL  EAA+LS F  NF+      FP P        VLVE + QG  +S +++   G
Sbjct: 357 RLQLDLRIEAANLSIFRKNFKPRTTAWFPFPYTQFTTRQVLVEEFAQGIPLSDFME--NG 414

Query: 429 HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQ------------------- 469
               +  +A  G  A L+MLL+DNFIHAD+HPGNI+VR  Q                   
Sbjct: 415 GGVFQQDIADEGLDAFLRMLLIDNFIHADLHPGNIMVRFYQSEKPNLPFSKHKDEDPQSQ 474

Query: 470 ----------------KKSSQ----------KRLFRSKPHVIFLDVGMTAELSKTDRVNL 503
                           +K  Q          K  FR  P +IF+D G+  EL+ T+R N 
Sbjct: 475 PDVTEQVLARLQPYRHRKDPQAWQAELSKIDKEGFR--PQLIFIDTGLVTELNATNRRNF 532

Query: 504 VEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEE--------------VDEAFAFWG 549
           ++ FKAVA  DG  A          Q C  P A I+E                   A   
Sbjct: 533 LDLFKAVAEFDGYKAGHLMC-----QRCRQPDAVIDEEIYSLKMQHLVLGVKSRTLALGN 587

Query: 550 TPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQT 609
              GD+++      ++L  VR H V ++G+   V+++ L+LEG  R L+P  +++ +   
Sbjct: 588 MKIGDILN------EVLSMVRTHHVRMEGDFVNVVISILLLEGIGRSLNPDIDLLSSALP 641

Query: 610 LL 611
           +L
Sbjct: 642 IL 643


>gi|307110045|gb|EFN58282.1| hypothetical protein CHLNCDRAFT_142258 [Chlorella variabilis]
          Length = 1165

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 159/419 (37%), Positives = 220/419 (52%), Gaps = 40/419 (9%)

Query: 219  VVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGR 278
            ++L     +GPAFIKWGQWA+TR D+FP   C  LSELH +AP H    T++T+E AFGR
Sbjct: 748  LLLGACRRSGPAFIKWGQWASTREDIFPPAFCAVLSELHDRAPTHPAEQTRRTVEAAFGR 807

Query: 279  RLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVI 338
             L  +F  FE  P+ASGSIAQVHRA +      Q+     VAVKVRHPGV   I  DF +
Sbjct: 808  PLDSLFVSFEPQPLASGSIAQVHRARMLVDGRVQQ-----VAVKVRHPGVASCIWMDFQL 862

Query: 339  INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRR-WKDVSFP 397
            +   A +++ + +++ L L +SV QF+  M +Q DL  EA HL RF  NFR     V  P
Sbjct: 863  LRPLAALTARVRSLRSLNLSDSVSQFSHTMTAQADLRVEAEHLRRFYNNFRHVTSSVHVP 922

Query: 398  KPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHAD 457
            +P+       VLVE+YE G  V+ ++          + +  +G    LKMLL DNF+H D
Sbjct: 923  QPIDGYCTEEVLVESYEAGASVAAFIHNPHPQ---NTQIVALGVDTYLKMLLQDNFVHTD 979

Query: 458  MHPGNILVRVAQ---------------------KKSSQKRLFRSKPHVIFLDVGMTAELS 496
            +HPGNILVR A                        SS KRL      ++ LD G+  EL+
Sbjct: 980  LHPGNILVRPAANGGGVGRAGGAHLAEGGEPEGGSSSWKRL-----ELVLLDFGLAEELT 1034

Query: 497  KTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAF---AFWGTPEG 553
               R + + F   +A+ DGR AAE  L+ S  Q CP+  A   +++  F       + EG
Sbjct: 1035 PAVRHHFISFLHMIAKGDGRRAAEHLLQWSANQRCPDRDALTADMEALFQQRCNIHSEEG 1094

Query: 554  DLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLL 612
              ++    M+ +L   RRH V++D N   ++V   V+ G+   LD   N+MD      L
Sbjct: 1095 --INLDAVMKAVLHLARRHEVSIDSNYAALVVGVCVIVGFATSLDRRVNLMDAATPCFL 1151


>gi|322711149|gb|EFZ02723.1| ubiquinone biosynthesis protein, putative [Metarhizium anisopliae
           ARSEF 23]
          Length = 634

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 175/545 (32%), Positives = 260/545 (47%), Gaps = 110/545 (20%)

Query: 180 ECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE---------LWLHVVLRTLETAGPA 230
           E V    R L+L  +F P I+  P A   G +  E          W   +++ +E AGPA
Sbjct: 67  EPVCTGFRFLHLLAIFVPVIITVP-AIWIGKRRPERDNERSGTLWWYEFLVKAMELAGPA 125

Query: 231 FIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEE 289
           FIK GQWAA+R D+FP ++C  +S+LHS AP HS   T++T+  AF GR   +IFD F+E
Sbjct: 126 FIKLGQWAASRTDIFPNEMCDTMSKLHSNAPAHSMHATRRTVSAAFGGREFDDIFDEFDE 185

Query: 290 APVASGSIAQVHRASLR------------------------------FRYPGQKVKPIVV 319
            P+  G+IAQV++A L+                               +   ++V    V
Sbjct: 186 RPLGVGAIAQVYKAKLKPELAMSKGGMNGSEGYGGLSENVRRNVETVLKSSPKRVPSSYV 245

Query: 320 AVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAA 379
           AVKV HP V   +RRD  I++  A I + IP ++WL L + V QF   M  Q+DL  EAA
Sbjct: 246 AVKVLHPRVDRIVRRDLKIMHFFASILNAIPTIEWLSLPDEVAQFGEMMKLQLDLRIEAA 305

Query: 380 HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHI 439
           +L RF  NF+     SFP P        VL+E + QG  ++ +++   G    +  +A  
Sbjct: 306 NLERFRRNFKDRTTASFPYPYTDFTTRNVLIEEFAQGIPLADFME--NGGGVFQHDIADE 363

Query: 440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRL---------------------- 477
           G  A L+MLL+DNF+HAD+HPGNI+VR  Q    + RL                      
Sbjct: 364 GLDAFLRMLLLDNFVHADLHPGNIMVRFYQAAQPELRLRKKPDRNAHDQEADVTEKVLER 423

Query: 478 ---FRS-------------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
              FR                    +P +IF+D G+  EL+ T+R N ++ F+AVA  DG
Sbjct: 424 LRPFRRRKNKAAWEAELAKIDAEGYRPQLIFIDTGLVTELNATNRANFLDLFRAVAEFDG 483

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFW----------GTPEGDLVHPAECMQQL 565
             A          + C  P+A +E+  E FA             T     V   + +QQ+
Sbjct: 484 YKAGHLMC-----ERCRQPEAVLEK--EVFALKMQHLVLSVKSRTLALGNVKIGDILQQV 536

Query: 566 LEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK------ADWAKS 619
           L  VR H V ++G+   V+++ L+LEG  R L+P  +++ +   +L +      A  AKS
Sbjct: 537 LSMVRNHHVRMEGDFVNVVISILLLEGIGRSLNPDVDLLSSSLPILRQLGAQSGATMAKS 596

Query: 620 LSYTI 624
             +++
Sbjct: 597 GDFSV 601


>gi|340518804|gb|EGR49044.1| predicted protein [Trichoderma reesei QM6a]
          Length = 697

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 173/518 (33%), Positives = 250/518 (48%), Gaps = 108/518 (20%)

Query: 187 RALYLGVLFSPSIMMAPFADSFGPQFRE---------LWLHVVLRTLETAGPAFIKWGQW 237
           R L+L V+F P I+  P A  FG +  +          W   +++++E AGPAFIK GQW
Sbjct: 133 RFLHLVVIFVPVILSVP-AIWFGRRHPDKDDERSGTLWWYGFLVKSMELAGPAFIKLGQW 191

Query: 238 AATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAPVASGS 296
           AA+R D+FP  +C  +S+LHS AP HS   T++T+E AF GR   +IFD F+E P+  G+
Sbjct: 192 AASRTDIFPTAMCDAMSKLHSNAPAHSMRVTRRTVEAAFNGRSFDDIFDEFQETPLGVGA 251

Query: 297 IAQVHRASLR--FRYP-----------------GQKVKPIV-----------VAVKVRHP 326
           IAQV++A L+  F  P                  Q+VK ++           VAVKV HP
Sbjct: 252 IAQVYKAKLKPDFALPQEPDVASKEPHPLAQNVKQRVKTVLKSSPNPVPSTYVAVKVLHP 311

Query: 327 GVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIY 386
            V   ++RD  I+   A I + IP ++WL L + V QF   M  Q+DL  EAA+L RF  
Sbjct: 312 NVERIVQRDLRIMGFFATILNAIPTIEWLSLPDEVAQFGEMMKLQLDLRIEAANLERFRK 371

Query: 387 NFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK 446
           NFR     SFP P        VL+E + QG  ++ +++   G    +  +A  G  A L+
Sbjct: 372 NFRDRTTASFPIPYSEFTTRNVLIEEFAQGIPLADFME--NGGGVFQHDIADEGLDAFLR 429

Query: 447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRS-------------------------- 480
           MLL+DNF+HAD+HPGNI+VR  Q      RL RS                          
Sbjct: 430 MLLLDNFVHADLHPGNIMVRFYQSAQPNLRLRRSAEKPAPSDGNDRHLDVTEQVLERLRP 489

Query: 481 ----------------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
                                 +P + F+D G+  EL+  +R N +  F+AVA  DG  A
Sbjct: 490 YRHRKDKSAWEAELAKLDEEGYRPQLCFIDTGLVTELNAVNRDNFLALFRAVAEFDGYKA 549

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDEAFAF----------WGTPEGDLVHPAECMQQLLEK 568
                     + C  P+A I++  E FA             T     V   + +QQ+L  
Sbjct: 550 GHLMC-----ERCRQPEAVIDK--EVFALKMQHLVLSVKSRTLALGNVKIGDILQQVLSM 602

Query: 569 VRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           VR H V ++G+   V+++ L+LEG  R L+P  +++ T
Sbjct: 603 VRNHHVRLEGDFVNVVISILLLEGIGRSLNPDVDLLST 640


>gi|358386058|gb|EHK23654.1| hypothetical protein TRIVIDRAFT_212602 [Trichoderma virens Gv29-8]
          Length = 722

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 167/516 (32%), Positives = 244/516 (47%), Gaps = 105/516 (20%)

Query: 187 RALYLGVLFSPSIMMAP-------FADSFGPQFRELWLH-VVLRTLETAGPAFIKWGQWA 238
           R L+L V+F P I+  P         D  G +   LW +  +++++E AGPAFIK GQWA
Sbjct: 159 RFLHLVVIFVPVILSVPAIWFGRRHPDKDGERSGTLWWYGFLVKSMELAGPAFIKLGQWA 218

Query: 239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAPVASGSI 297
           A+R D+FP  +C  +S+LHS AP HS   T++T+E AF GR   +IFD F E P+  G+I
Sbjct: 219 ASRTDIFPTAMCDTMSKLHSNAPAHSMRVTRRTVEEAFNGRNFEDIFDEFHETPLGVGAI 278

Query: 298 AQVHRASLR------------------------------FRYPGQKVKPIVVAVKVRHPG 327
           AQV++A L+                               +    +V    VAVKV HP 
Sbjct: 279 AQVYKAKLKPDLAAPQDLGAVPKEPRPLSQNVKDRVRTVLKSSPNQVPSTYVAVKVLHPN 338

Query: 328 VGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYN 387
           V   +RRD  I+   A + + IP ++WL L + V QF   M  Q+DL  EAA+L  F  N
Sbjct: 339 VDRIVRRDLKIMGFFATLLNTIPTIEWLSLPDEVSQFGEMMKLQLDLRIEAANLETFRKN 398

Query: 388 FRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKM 447
           FR     SFP P        VL+E + QG  ++ +++   G    +  +A  G  A L+M
Sbjct: 399 FRGRTTASFPFPYSEFTTRNVLIEEFAQGIPLADFME--NGGGVFQHDIADEGLDAFLRM 456

Query: 448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRS--------------------------- 480
           LL+DNF+HAD+HPGNI+VR  Q      RL RS                           
Sbjct: 457 LLLDNFVHADLHPGNIMVRFYQSAQPNLRLRRSRETPPTSDDDDHLDVTEQVLERLRPYR 516

Query: 481 --------------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
                               +P +IF+D G+  EL+  +R N +  F+AVA  DG  A  
Sbjct: 517 RRKDKSAWEAELAKIDAEGYRPQLIFIDTGLVTELNAVNRDNFLALFRAVAEFDGYKAGH 576

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFW----------GTPEGDLVHPAECMQQLLEKVR 570
                   + C  P+A I++  E FA             T     V   + +Q++L  VR
Sbjct: 577 LMC-----ERCRQPEAVIDK--EVFALKMQHLVLSVKSRTLALGNVKIGDILQEVLSMVR 629

Query: 571 RHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
            H V ++G+   V+++ L+LEG  R L+P  +++ +
Sbjct: 630 NHHVRLEGDFVNVVISILLLEGIGRSLNPNVDLLSS 665


>gi|342876916|gb|EGU78467.1| hypothetical protein FOXB_10988 [Fusarium oxysporum Fo5176]
          Length = 694

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 168/521 (32%), Positives = 253/521 (48%), Gaps = 102/521 (19%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE---------LWLHVVLRTLETAG 228
           ++E V    R L L V+F P I+  P A  FG +  +          W   ++  +E AG
Sbjct: 127 IIEPVCTGFRFLQLVVIFVPVIITIP-AIYFGKRQPDRDNERSGTLWWYGFLVNEMELAG 185

Query: 229 PAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGF 287
           PAFIK GQWAA+R D+FP ++C+ +S+LHS AP HS   T+ T+E AF GRR  +IFD F
Sbjct: 186 PAFIKLGQWAASRTDIFPTEMCEIMSKLHSNAPAHSLHATRVTVEAAFGGRRFEDIFDEF 245

Query: 288 EEAPVASGSIAQVHRASLR----------------------------FRYPGQKVKPIVV 319
           +E P+  G+IAQV++A L+                             +   Q+V    V
Sbjct: 246 QEKPLGVGAIAQVYKAKLKPGLAKPEEADLHDSYPLAQNVKRNVDTVLKSSPQRVPSSYV 305

Query: 320 AVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAA 379
           AVKV HP V  ++RRD  I+   A + ++IP ++WL L + V QF   M  Q+DL  EAA
Sbjct: 306 AVKVLHPYVERTVRRDLRIMGFFASLLNLIPTIEWLSLPDEVAQFGEMMKLQLDLRIEAA 365

Query: 380 HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHI 439
           +L+ F  NF+      FP P        VL+E Y QG  ++ +++   G    +  +A  
Sbjct: 366 NLATFRKNFKDRSTAWFPYPYTEYTTRNVLIEEYAQGIPLADFME--NGGGVFQHDIADE 423

Query: 440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRS------------------- 480
           G  A L+MLL+DNF+HAD+HPGNI+VR  Q    + RL ++                   
Sbjct: 424 GLDAFLRMLLLDNFVHADLHPGNIMVRFYQSAHPELRLRKTMTKAHPDEKDDVTEQVLER 483

Query: 481 -------------------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
                                    +P +IF+D G+  EL+  +R N ++ F+AVA  DG
Sbjct: 484 LRPYRHRKDPKAWEAELAKIDAEGFRPQLIFIDTGLVTELNAVNRENFLDLFRAVAEFDG 543

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF------WGTPEGDL----VHPAECMQQL 565
             A          + C  P A +++  E FA        G     L    V   + +Q++
Sbjct: 544 YKAGHLMC-----ERCRQPDAVLDK--EVFALKMQHLVLGVKSRTLALGNVKIGDILQEV 596

Query: 566 LEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           L  VR H V ++G+   V+++ L+LEG  R L+P  +++ +
Sbjct: 597 LSMVRNHHVRLEGDFVNVVISILLLEGIGRSLNPDVDLLSS 637


>gi|310800965|gb|EFQ35858.1| ABC1 family protein [Glomerella graminicola M1.001]
          Length = 689

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 169/531 (31%), Positives = 259/531 (48%), Gaps = 101/531 (19%)

Query: 168 HAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPF-------ADSFGPQFRELWLH-V 219
           H    ++   + E +   +R L+L V+F P I   P         D    +   LW +  
Sbjct: 111 HTLTITLDLYVWEPLCTGVRFLHLLVIFVPVIFAVPAIWLGRRRPDRDNERTGTLWWYGF 170

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GR 278
           +++++E AGPAFIK GQWAA+R D+FP ++C+ +S+LHS AP HS   TK+ +  AF GR
Sbjct: 171 LVQSMEWAGPAFIKLGQWAASRTDIFPTEMCEIMSKLHSNAPAHSMYDTKRIVSAAFDGR 230

Query: 279 RLSEIFDGFEEAPVASGSIAQVHRASLR--FRYPGQK-----VKPI-------------- 317
              +IFD F+E P+  G+IAQV+RA L+     PG K      KP+              
Sbjct: 231 NFDDIFDEFDEKPLGVGAIAQVYRAKLKPGLAAPGDKDIDETPKPLRHKVAKNVEAALKS 290

Query: 318 --------VVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369
                    VAVKV HP V  ++RRD  I++  A   ++IP ++WL L + V QF   M 
Sbjct: 291 TPKRVPSSYVAVKVLHPRVERTVRRDLRIMHFFASALNLIPTIEWLSLPDEVAQFGEMMK 350

Query: 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH 429
            Q+DL  EAA+L++F  NF+      FP P       +VLVE + QG  ++ +++   G 
Sbjct: 351 LQLDLRIEAANLAKFRKNFKDRTTAWFPYPYTEFTTRSVLVEEFAQGIPLADFLE--NGG 408

Query: 430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRS--------- 480
              +  +A  G  A L+MLL+DNF+HAD+HPGNI+VR  Q    + +  R+         
Sbjct: 409 GVFQEDIASEGLDAFLRMLLIDNFVHADLHPGNIMVRFYQSHEPELKFRRNTGKGHPEEQ 468

Query: 481 -----------------------------------KPHVIFLDVGMTAELSKTDRVNLVE 505
                                              +P +IF+D G+  EL++T+R N ++
Sbjct: 469 DDVTEQVLARLRPYRHRKNPAAWAAELQKIDDEGFRPQLIFIDTGLVTELNETNRTNFLD 528

Query: 506 FFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF------WGTPEGDL---- 555
            F+AVA  DG  A          + C  P A +++  E FA        G     L    
Sbjct: 529 LFRAVAEFDGYKAGNLMC-----ERCRQPDAVLDK--EVFALKMQHLVLGVKSRTLALGN 581

Query: 556 VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           +   + +Q +L  VRRH V ++G+   V+++ L+LEG  R L P  +++ +
Sbjct: 582 IKIGDILQDVLGMVRRHHVRLEGDFVNVVISILLLEGIGRSLHPDMDLLSS 632


>gi|452977594|gb|EME77360.1| hypothetical protein MYCFIDRAFT_217057 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 996

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 171/547 (31%), Positives = 256/547 (46%), Gaps = 112/547 (20%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPF-------ADSFGPQFRELWLH-VVLRTLETAGP 229
           + E +    R  +L ++F P I   P         D  G +   LW +  ++ ++E AG 
Sbjct: 427 IYEPIATTFRFFHLVIIFVPVIATVPVMWFGARQKDKDGERSGTLWWYGFLVSSMERAGA 486

Query: 230 AFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEE 289
           AFIK GQWAA+R D+FP  +C+ +S LHS AP HS   T++TIERAFGRR  +IFD F+E
Sbjct: 487 AFIKLGQWAASRTDIFPTQMCRIMSALHSNAPAHSLQVTQETIERAFGRRFEDIFDEFDE 546

Query: 290 APVASGSIAQVHRASLRFRYPGQ------------------KVKPIV-----------VA 320
            P+  G+IAQV++A L+    G+                   V P++           VA
Sbjct: 547 QPLGVGAIAQVYKAKLKPDLVGEGQQEIEVAPKNIRERALRTVDPLLKSTPNRVPSTYVA 606

Query: 321 VKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAH 380
           +KV HP +   +RRD  I+   A I + IP ++W    + V+QF   M  Q+DL  EAA+
Sbjct: 607 IKVLHPKIERIVRRDLCIMGAFANIINAIPTMEWFSFPDEVKQFGEMMRLQLDLRIEAAN 666

Query: 381 LSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIG 440
           L+ F  NFR      FP P        VLVE +  G  +  ++    G    +  +A  G
Sbjct: 667 LTLFRKNFRTRSTAWFPYPYTQYTTRQVLVEEFATGIPLEHFLH--NGGGVFQKEIADEG 724

Query: 441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKR------------------------ 476
             A L MLL+DNFIHAD+HPGN++VR  +  + + R                        
Sbjct: 725 LDAFLHMLLIDNFIHADLHPGNVMVRFYRPATVRDRTPFPSWTGKGKPDVEGSEDVTEQV 784

Query: 477 LFRSKPH----------------------VIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           + R KPH                      +IF+D G+  EL++T+R N ++ FK+VA  D
Sbjct: 785 ISRLKPHRDNKESWLATLKQIDKENYRPQLIFIDAGLVTELNETNRKNFLDLFKSVAEFD 844

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEE--------------VDEAFAFWGTPEGDLVHPAE 560
           G  + +  +     + C  P A I+E                  FA      GD+     
Sbjct: 845 GYKSGKLMV-----ERCRQPDAVIDEEVFALRMQHLVLGVKSRTFALGNIKIGDI----- 894

Query: 561 CMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL--LKADWAK 618
            + ++L+ VR H V ++G+   V+++ L+LEG  R LDP  ++      +L  L A   K
Sbjct: 895 -LNEVLDMVRSHHVRLEGDFVNVVLSILLLEGIGRTLDPDLDLFSGALPILRQLGAQSGK 953

Query: 619 SLSYTID 625
           S+  + D
Sbjct: 954 SMLTSGD 960


>gi|320583602|gb|EFW97815.1| ABC1 family protein [Ogataea parapolymorpha DL-1]
          Length = 589

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 155/473 (32%), Positives = 236/473 (49%), Gaps = 58/473 (12%)

Query: 180 ECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE-------LWLHVVLRTLETAGPAFI 232
           E VI + R + L  LF P     P    FG + +E       LW  +V    E AG +FI
Sbjct: 111 EPVITVTRFVELTSLFIPMFATYPIV-FFGKRNKEGDTSGALLWYRLVRHLAELAGASFI 169

Query: 233 KWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAP 291
           K GQWAA+R D+F + LC++L++LHS A  HSF +T++ IE  F G +L ++FD F+  P
Sbjct: 170 KLGQWAASRTDIFSKGLCEELAQLHSNAKSHSFRHTRQIIESTFGGNKLEDVFDEFDPVP 229

Query: 292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPA 351
           +  G+IAQV++A L  ++  +  +   VAVKV HP +   I RD  ++   A    VIP 
Sbjct: 230 IGCGAIAQVYKAKLNKKFAEEDHEQ-YVAVKVVHPNIEVKIERDLRLMRFFANAIDVIPT 288

Query: 352 VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVE 411
           ++WL L + V+QF++ M  Q+DL  E  +L +F   F    ++ FPKP   +    VLVE
Sbjct: 289 MEWLSLPQEVEQFSILMKMQLDLRIEGHNLLKFKEKF-PGDEIRFPKPFMNISSRKVLVE 347

Query: 412 TYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKK 471
              +G  +++ +D  +G + +   ++     A LKML++DNFIHAD+HPGNI VR  Q+ 
Sbjct: 348 QEIKGLSMTKILDLTKGGKHISKEVSDSMIDAFLKMLILDNFIHADLHPGNIFVRFVQRN 407

Query: 472 SSQKRLFRSK--------------------------------PHVIFLDVGMTAELSKTD 499
              +     +                                P +  +D G+  EL  TD
Sbjct: 408 RKTRETISDELETDQLMARLRKINQASELMAELEKLDKEDYHPQICLIDAGLVTELDDTD 467

Query: 500 RVNLVEFFKAVARRDGRTAAECTLRLSKQQNCP-NPKAFIEEVD--------EAFAFWGT 550
           R N +  F A+++ DG  A    +  SK      + + F  +V+          F     
Sbjct: 468 RYNFISLFNALSQFDGYQAGTLMIERSKTPGSAIDTEVFKMKVERLVNRVKQRTFTLGSI 527

Query: 551 PEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
             GDL      + Q+L  VR H V +DG+  TV+V  L++EG  R+LDP  ++
Sbjct: 528 SIGDL------LDQMLGMVRSHHVRMDGDFITVIVAILLMEGIGRQLDPDLDL 574


>gi|406859113|gb|EKD12184.1| ABC1 family protein [Marssonina brunnea f. sp. 'multigermtubi'
           MB_m1]
          Length = 689

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 168/516 (32%), Positives = 252/516 (48%), Gaps = 99/516 (19%)

Query: 186 MRALYLGVLFSPSIMMAP-----FADSFGPQFRE---LWLHVVLRTLETAGPAFIKWGQW 237
           +R L+L V+F P I+  P       D      R     W   +++++E AGPAFIK GQW
Sbjct: 131 LRFLHLVVIFVPVIVTVPALWIGMRDKKRDNERSGTLWWYWFLVKSMERAGPAFIKLGQW 190

Query: 238 AATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAPVASGS 296
           AA+R D+FP  +C+ +S+LHS AP HS   TK+ I RAF GR   +IF+ F E P+  G+
Sbjct: 191 AASRSDIFPEQMCEIMSQLHSNAPAHSLHETKRIIRRAFDGRPFEDIFEEFNEKPLGVGA 250

Query: 297 IAQVHRASLR--FRYPG--------------------------QKVKPIVVAVKVRHPGV 328
           IAQV++A L+     PG                          Q+V    VA+KV HPGV
Sbjct: 251 IAQVYKAKLKADLAAPGDVDIKESRDFRQNVRKNVDTLIKSTPQRVPSTYVAIKVLHPGV 310

Query: 329 GESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
              +RRD  I+   A + +++P ++WL L + V+QF   M  Q+DL  EAA+L+ F   F
Sbjct: 311 ERMVRRDLKIMGFFASLLNIVPTIEWLSLPDEVEQFGEMMRLQLDLRIEAANLTIFRKKF 370

Query: 389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML 448
           +      FP P        VLVE + QG  +S +++   G    +  +A  G  A L+ML
Sbjct: 371 KERTTAWFPYPYTAFTTRQVLVEEFAQGIPLSDFME--NGGGVFQQEIADEGLDAFLRML 428

Query: 449 LVDNFIHADMHPGNILVRV-------------------AQKKSSQKRLFRSKPH------ 483
           L+DNF+HAD+HPGNI+VR                    AQ   +++ L R +P+      
Sbjct: 429 LLDNFVHADLHPGNIMVRFYKSEQPRLPFSRDKDEDPQAQPDVTEQVLARLRPYRHRKDT 488

Query: 484 ------------------VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL 525
                             +IF+D G+  EL+ T+R N ++ FKAVA  DG  A       
Sbjct: 489 KAWEAELQKIDNEGFRPQLIFIDTGLVTELNATNRTNFLDLFKAVAEFDGYKAGHLMC-- 546

Query: 526 SKQQNCPNPKAFIEEVDEAFAF------WGTPEGDL----VHPAECMQQLLEKVRRHRVN 575
              + C  P A I++  E FA        G     L    +   + + ++L  VR H V 
Sbjct: 547 ---ERCRQPDAVIDQ--EIFALKMQHLVIGVKSRTLALGNMKIGDILNEVLGMVRSHHVR 601

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           ++G+   V+++ L+LEG  R L+P  +++ +   +L
Sbjct: 602 MEGDFVNVVISILLLEGIGRSLNPDIDLLSSALPIL 637


>gi|302405096|ref|XP_003000385.1| ABC1 family protein [Verticillium albo-atrum VaMs.102]
 gi|261361042|gb|EEY23470.1| ABC1 family protein [Verticillium albo-atrum VaMs.102]
          Length = 717

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 168/529 (31%), Positives = 260/529 (49%), Gaps = 100/529 (18%)

Query: 168 HAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQ--FRE-------LWLH 218
           H+ +  +   +VE V+  +R L+L ++F P I+  P A  FG +   R+        W  
Sbjct: 112 HSLLIGLDTYVVEPVMTGIRFLHLVIIFVPVIVTVP-AIWFGARQPSRDNERSGTLWWYG 170

Query: 219 VVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-G 277
            +++ +E AGPAFIK GQWAA+R D+FP ++C+ +S+LHS AP HS   TK+ +  AF G
Sbjct: 171 FLVQAMEWAGPAFIKLGQWAASRSDIFPTEMCEIMSKLHSNAPAHSLHATKRIVSHAFGG 230

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLR-----------------------------FR 308
           +   EIFD F+E P+  G+IAQV++A L+                              +
Sbjct: 231 KSFEEIFDDFDEKPLGVGAIAQVYKAKLKPGLAVPSDGDLPREPSLLRHKVVKNVETALK 290

Query: 309 YPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368
              ++V    VAVKV HP V  ++RRD  I+   A   ++IP ++WL L + V QF   M
Sbjct: 291 SSPKRVPSSYVAVKVVHPNVERTVRRDLRIMYFFASAINIIPTMEWLSLPDEVAQFGEMM 350

Query: 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG 428
             Q+DL  EAA+L+ F  NF+      FP P        VLVE + QG  ++ +++   G
Sbjct: 351 KLQLDLRIEAANLAIFRKNFKDRSTAWFPYPYTEFTTRNVLVEEFAQGIPLADFME--NG 408

Query: 429 HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKS---------------- 472
               +  +A  G  A L+MLL+DNFIHAD+HPGNI+VR  Q +                 
Sbjct: 409 GGVFQQDIAEEGLDAFLRMLLIDNFIHADLHPGNIMVRFYQAEKPSLMSSHAKHPDEGDD 468

Query: 473 ------SQKRLFRSK-------------------PHVIFLDVGMTAELSKTDRVNLVEFF 507
                 ++ R +R +                   P +IF+D G+  EL+ T+R N ++ F
Sbjct: 469 VTEQVLARLRPYRHRKDPAAWDAELKKIEHEGFHPQLIFIDTGLVTELNATNRTNFLDLF 528

Query: 508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF------WGTPEGDL----VH 557
           +AVA  DG  A          + C  P   +++  E FA        G     L    + 
Sbjct: 529 RAVAEFDGYKAGNLMC-----ERCRQPDDVLDQ--EVFALKMQHLVLGVKSRTLALGNIK 581

Query: 558 PAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
             + +QQ+L  VR H V ++G+   V+++ L+LEG  R L+P  +++ +
Sbjct: 582 IGDILQQVLGMVRGHHVRMEGDFVNVVISILLLEGIGRSLNPDMDLLSS 630


>gi|380488693|emb|CCF37199.1| ABC1 family protein [Colletotrichum higginsianum]
          Length = 698

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 166/538 (30%), Positives = 260/538 (48%), Gaps = 108/538 (20%)

Query: 168 HAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPF-------ADSFGPQFRELWLH-V 219
           H  + +V   L E +   +R L+L V+F P I+  P         D    +   LW +  
Sbjct: 113 HTLMIAVDVYLWEPLCTGLRFLHLVVIFVPVIVTVPALWLGKRQPDRDNERSGTLWWYGF 172

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GR 278
           +++++E AGPAFIK GQWAA+R D+FP ++C+ +S+LHS AP HS   TK+ +  AF GR
Sbjct: 173 LVQSMEWAGPAFIKLGQWAASRSDIFPNEMCEIMSKLHSNAPAHSMRETKRIVSAAFDGR 232

Query: 279 RLSEIFDGFEEAPVASGSIAQVHRASLR------------------------------FR 308
              +IFD F+E P+  G+IAQV+RA L+                               +
Sbjct: 233 HFDDIFDEFDETPLGVGAIAQVYRAKLKPNLAAPSDNDIAAEGPKPLRQKVAKNVEAALK 292

Query: 309 YPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368
              ++V    VAVKV HP V  ++RRD  I++  A   ++IP ++WL L + V QF   M
Sbjct: 293 STPRRVPSTYVAVKVLHPRVERTVRRDLRIMHFFASGLNLIPTIEWLSLPDEVAQFGEMM 352

Query: 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG 428
             Q+DL  EAA+L++F  NFR      FP P       +VLVE + QG  ++ +++   G
Sbjct: 353 KLQLDLRIEAANLAKFRKNFRDRTTAWFPYPYTEFTTRSVLVEEFAQGIPLADFLE--NG 410

Query: 429 HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRS-------- 480
               +  +A  G  A L+MLL+DNF+HAD+HPGNI+VR  Q    + +  R         
Sbjct: 411 GGVFQQDIASEGLDAFLRMLLIDNFVHADLHPGNIMVRFYQSHEPEIKFRRKGNHGRGEH 470

Query: 481 ------------------------------------------KPHVIFLDVGMTAELSKT 498
                                                     +P +IF+D G+  EL++T
Sbjct: 471 PGDQGGDDDVTEQVLARLRPYRQRKDPAAWAAELRRIDNEGFRPQLIFIDTGLVTELNET 530

Query: 499 DRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF------WGTPE 552
           +R N ++ F+AVA  DG  A +        + C  P A +++  + FA        G   
Sbjct: 531 NRTNFLDLFRAVAEFDGYKAGQLMC-----ERCRQPDAVLDK--DVFALKMQHLVLGVKS 583

Query: 553 GDL----VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
             L    +   + +Q++L  VR H V ++G+   V+++ L+LEG  R L+P  +++ +
Sbjct: 584 RTLALGNIRIGDILQEVLGMVRGHHVRLEGDFVNVVISILLLEGIGRSLNPDMDLLSS 641


>gi|358394672|gb|EHK44065.1| hypothetical protein TRIATDRAFT_245031 [Trichoderma atroviride IMI
           206040]
          Length = 609

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 172/527 (32%), Positives = 252/527 (47%), Gaps = 107/527 (20%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPF-------ADSFGPQFRELWLH-VVLRTLETAGP 229
           ++E +    R L+L V+F P I+  P         D  G +   LW +  +++++E AGP
Sbjct: 35  ILEPICTGARFLHLMVIFVPVILSVPVIWFGRRQPDKDGERSGTLWWYGFLVQSMEWAGP 94

Query: 230 AFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFE 288
           AFIK GQWAA+R D+FP  +C  +S+LHS AP HS   T+KT+E AF GR+  +IFD F 
Sbjct: 95  AFIKLGQWAASRTDIFPTAMCDTMSKLHSNAPAHSMHVTRKTVEAAFNGRKFEDIFDEFY 154

Query: 289 EAPVASGSIAQVHRASLRF---------------RYPGQKVKPIV--------------- 318
           E P+  G+IAQV++A L+                R   Q VK  V               
Sbjct: 155 ETPLGVGAIAQVYKAKLKPDLAAPQDLEADSRGPRLLSQNVKNQVRTVLKSSPKQVPSTY 214

Query: 319 VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREA 378
           VAVKV HP V   +RRD  I+   A + +VIP ++WL L + V QF   M  Q+DL  EA
Sbjct: 215 VAVKVLHPKVERIVRRDLKIMGFFASMLNVIPTIEWLSLPDEVAQFGQMMKLQLDLRIEA 274

Query: 379 AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAH 438
           A+L  F  NF+     SFP P        VL+E + QG  ++ +++   G    +  +A+
Sbjct: 275 ANLEIFRKNFKDRTTASFPFPYSEFTTRNVLIEEFAQGIPLAVFME--SGGGVFQHDIAN 332

Query: 439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRS------------------ 480
            G  A L+MLL+DNF+HAD+HPGNI+VR  Q      RL RS                  
Sbjct: 333 EGLDAFLRMLLLDNFVHADLHPGNIMVRFYQSAQPDLRLRRSTKSPKTPPASDDDQLDVT 392

Query: 481 -------------------------------KPHVIFLDVGMTAELSKTDRVNLVEFFKA 509
                                          +P ++F+D G+  EL+  +R N +  F+A
Sbjct: 393 EKVLERLRPHRHRKDRSAWEAELAKIDAEGYRPQLVFIDTGLVTELNAPNRDNFLALFRA 452

Query: 510 VARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF----------WGTPEGDLVHPA 559
           VA  DG  A          + C  P+A I++  E FA             T     V   
Sbjct: 453 VAEFDGYKAGHLMC-----ERCRQPEAVIDK--EVFALKMQHLVLSVKSRTLALGNVKIG 505

Query: 560 ECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           + +Q +L  VR H V ++G+   V+++ L+LEG  R L+P  +++ +
Sbjct: 506 DILQDVLSMVRNHHVRLEGDFVNVVISILLLEGIGRSLNPDVDLLSS 552


>gi|340382215|ref|XP_003389616.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           2-like [Amphimedon queenslandica]
          Length = 483

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 153/449 (34%), Positives = 236/449 (52%), Gaps = 33/449 (7%)

Query: 182 VILLMRALYLGVLFSPSIMMAPFADSFGPQF-RELWLHVVLRTLETAGPAFIKWGQWAAT 240
           +I++ R  YLG+LFSP ++          +F   L   ++L ++E AGPAFIK GQWA+T
Sbjct: 46  LIVVFRLFYLGLLFSPVLLCHVIEILLPLRFILSLKWSLLLFSIERAGPAFIKLGQWAST 105

Query: 241 RPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQV 300
           RPD+F    C  LS+L      HS+  TK+T+E +FG +  ++F  ++  P+ SG IAQV
Sbjct: 106 RPDIFSESTCAFLSQLQRDCTPHSWDATKQTLEDSFGPQWEDMFTRYDHTPIGSGCIAQV 165

Query: 301 HRASLRFRYPGQKVKPIV--------VAVKVRHPGVGESIRRD-FVIINLAAKISSVIPA 351
           ++  L            V        VAVKV HPGV  S+ RD +++  +A  +  V P+
Sbjct: 166 YKWDLSTDSMQCSADAAVKANGGSLPVAVKVVHPGVVGSVLRDVYLMETVAWFVDRVFPS 225

Query: 352 VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVE 411
           V W+ L E V +F + M  Q+DL  EA  + +F  NF+  K +  P+P++ LV  +VLVE
Sbjct: 226 VYWISLRECVDEFGIVMKKQLDLKAEAVSMDQFRKNFKSHKHIKIPQPIHTLVTNSVLVE 285

Query: 412 TYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKK 471
           T+E+G  +S+YV E +    LK  +A +G   LL ML V NF+H DMHPGN+LV+     
Sbjct: 286 TFEEGVHISQYVKESE-QTSLKKRIASLGIDVLLNMLFVHNFVHCDMHPGNLLVQTDPSV 344

Query: 472 SSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNC 531
                     P ++ LD G+TA L+  D  NL + F A+ +++G   A+  L  +    C
Sbjct: 345 GGG-----GDPSLVLLDCGVTASLNNRDWDNLHQLFLAIVKKEGGVVADLMLSNASTNAC 399

Query: 532 PNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLE 591
            +  ++ +E+             LV  A       E++    V ++ N  +VM+  +V+E
Sbjct: 400 TDVDSYRKEMKA-----------LVTSAT------EQLNLSTVKLESNFASVMLAVMVVE 442

Query: 592 GWQRKLDPGYNVMDTLQTLLLKADWAKSL 620
           G  R LDP  +++      LL+     SL
Sbjct: 443 GLGRSLDPQLDILAAATPFLLRKAAKDSL 471


>gi|302847084|ref|XP_002955077.1| hypothetical protein VOLCADRAFT_106661 [Volvox carteri f.
            nagariensis]
 gi|300259605|gb|EFJ43831.1| hypothetical protein VOLCADRAFT_106661 [Volvox carteri f.
            nagariensis]
          Length = 1892

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 159/423 (37%), Positives = 230/423 (54%), Gaps = 43/423 (10%)

Query: 219  VVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGR 278
            ++L     +G AFIKWGQW+ATR DLFP D C+ LS+LH +AP HSFA+TK+ +ERAFG 
Sbjct: 1456 LLLGGCRLSGAAFIKWGQWSATRVDLFPDDFCEALSQLHDQAPRHSFAFTKRQVERAFGV 1515

Query: 279  RLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVI 338
             L  +F+ F++ PVASGSIAQVHRA +R R  G    P+ VAVKV HP V   IR+DF +
Sbjct: 1516 PLDVMFEAFDQRPVASGSIAQVHRALMR-RSDG---SPLEVAVKVVHPKVELRIRQDFAL 1571

Query: 339  INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRR-WKDVSFP 397
            +  AA     +P+++ L L E+V QF+  M +Q DL  EAAHL RF +NF R  + V+ P
Sbjct: 1572 LQPAAAALGRLPSLRSLSLPETVSQFSSTMTAQADLRVEAAHLRRFYFNFSRVAEQVTTP 1631

Query: 398  KPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHAD 457
            +P+  LV   V+VE++E G  V+ ++ +      L +A+  +G    LKMLL DNF+H D
Sbjct: 1632 RPLPGLVRREVMVESWEVGASVAAFIRQ---PSPLNTAVVCLGVDTYLKMLLQDNFVHTD 1688

Query: 458  MHPGNIL--------VRVAQKKSSQKRLFRS-------------------------KPHV 484
            +HPG  +         R A K S  +    +                         +  +
Sbjct: 1689 LHPGEWVGAGRQTGPSRAAGKDSRGRGANEAAAAPVMSDSLDAAASAAAAAAVAAARVQL 1748

Query: 485  IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR-LSKQQNCPNPKAFIEE-VD 542
            + LD G+  EL+   R + + F   + R DG +AA   LR  S+ Q CP+P AF+ + V 
Sbjct: 1749 VLLDFGLAEELTPVVRHHFISFLHHMLRGDGASAAGHLLRWTSRPQACPDPAAFVADMVA 1808

Query: 543  EAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYN 602
             A A         +     M+ +L   R+H V +D    ++++   V+ G+   LDP  N
Sbjct: 1809 LAAARCDVHSAAGIDMDAVMKSVLRLARKHSVTIDSCYASLVIAVCVIVGFATSLDPWVN 1868

Query: 603  VMD 605
            + D
Sbjct: 1869 LAD 1871


>gi|367030321|ref|XP_003664444.1| hypothetical protein MYCTH_2307276 [Myceliophthora thermophila ATCC
           42464]
 gi|347011714|gb|AEO59199.1| hypothetical protein MYCTH_2307276 [Myceliophthora thermophila ATCC
           42464]
          Length = 633

 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 169/519 (32%), Positives = 251/519 (48%), Gaps = 102/519 (19%)

Query: 180 ECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE---------LWLHVVLRTLETAGPA 230
           E +    R L L V+F P I+  P A   G +  E          W   +++ +E AGPA
Sbjct: 68  EPICTSFRFLQLVVIFVPVILTVP-AIWIGGRVPERDNERTGTLWWYGFLVQAMEWAGPA 126

Query: 231 FIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEE 289
           FIK GQWAA+R D+FP +LC  +S+LH+ AP HSF  TK+ +E AF GR   +IFD F+ 
Sbjct: 127 FIKLGQWAASRSDIFPSELCDIMSKLHANAPAHSFHATKRIVEDAFGGREFDDIFDEFDR 186

Query: 290 APVASGSIAQVHRASLR--FRYPG---------------------------QKVKPIVVA 320
            P+  G+IAQV++A L+     PG                           ++V    VA
Sbjct: 187 TPIGVGAIAQVYKAKLKPDLAVPGDVDVPKDPHDLRHSVRRNVETVLKSKPKRVPSSYVA 246

Query: 321 VKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAH 380
           VKV+HP V  ++RRD  I+   A + + IP ++WL L + V QF   M  Q+D+  EAA+
Sbjct: 247 VKVQHPRVERTVRRDLRIMRFFASVLNAIPTMEWLSLPDEVDQFGEMMKLQLDMRIEAAN 306

Query: 381 LSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIG 440
           LSRF  NF+      FP P        VL+E +  G  ++ ++    G    +  +A  G
Sbjct: 307 LSRFRKNFKDRTTAWFPFPYTEFCTRDVLIEEFAYGIPLADFM--ANGGGVFQRDIASEG 364

Query: 441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRS-------------------- 480
             A L+MLL+DNF+HAD+HPGNI+VR  + +    RL R                     
Sbjct: 365 LDAFLRMLLLDNFVHADLHPGNIMVRFYEAEQPSLRLRRPPEQNPGMDQQAEVTEQVLSR 424

Query: 481 -----------------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
                                  +P +IF+D G+  EL+ T+R NL++ F+AVA  DG  
Sbjct: 425 LRPYRHNKDLWDAELANIEREGFRPQLIFIDTGLVTELNSTNRRNLLDLFRAVAEFDGYK 484

Query: 518 AAECTLRLSKQQNCPNPKAFIEEVDEAFAF------WGTPEGDL----VHPAECMQQLLE 567
           A          + C  P A +++  E FA        G     L    V   + +QQ+L 
Sbjct: 485 AGHLMC-----ERCRQPDAVLDK--EVFALKMQHLVLGVKSRTLALGNVKIGDILQQVLG 537

Query: 568 KVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
            VR+H V ++G+   V+++ L+LEG  R L+P  +++ +
Sbjct: 538 MVRQHHVRLEGDFVNVVISILLLEGIGRTLNPDLDLLSS 576


>gi|378732512|gb|EHY58971.1| aarF domain-containing kinase [Exophiala dermatitidis NIH/UT8656]
          Length = 689

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 173/535 (32%), Positives = 253/535 (47%), Gaps = 118/535 (22%)

Query: 173 SVLYSLVECVILLM----RALYLGVLFSPSIMMAPFADSFGPQFREL---------WLHV 219
           SV+Y L + +   M    R LYL ++F P I+  P A   GP+ +E          W   
Sbjct: 106 SVIYVLDQYIYEPMATGVRFLYLVIIFVPVIVTVP-AVFIGPRKKERDNERAGTLWWYGF 164

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GR 278
           ++R +E AGPAFIK GQWAA+R D+FP ++C+ +S LHS AP HS  +TKKTI  AF GR
Sbjct: 165 LVRAMEQAGPAFIKLGQWAASRSDIFPSEMCRIMSGLHSNAPAHSLHHTKKTISEAFGGR 224

Query: 279 RLSEIFDGFEEAPVASGSIAQVHRASL------------------RFRY----------- 309
           R  +IF  F+E P+  G+IAQV++A L                  R RY           
Sbjct: 225 RFEDIFVEFDEKPLGVGAIAQVYKARLKPDLAKPDDSDLDDHDKRRLRYRIKKNVDALVK 284

Query: 310 -PGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368
              Q+V    VA+KV HP V  ++RRD  I+ + A I + IP ++WL L   V  F   M
Sbjct: 285 SSPQRVPSAYVAIKVLHPKVERNVRRDLKIMGVFAAIINAIPTMEWLDLPNEVANFGEMM 344

Query: 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG 428
             Q+DL  EAA+L+    +F+      FP P        VLVE + QG  ++ +++   G
Sbjct: 345 RLQLDLRIEAANLTILRRHFQNRTTAWFPHPYTDFTTRNVLVEEFAQGLPLAAFLE--NG 402

Query: 429 HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVR---------------------- 466
               +  +A+ G  A L MLL+DNF+HAD+HPGNI+V                       
Sbjct: 403 GGVYQKEIANEGLDAFLHMLLIDNFVHADLHPGNIMVNFYKPTQPDVKIPYVSRQDPTQP 462

Query: 467 --VAQKKSSQKRLFRSKPHV----------------------IFLDVGMTAELSKTDRVN 502
              +    S+  L R +PH+                      IF+D G+  EL+  +R N
Sbjct: 463 ASASDIDESEAVLSRLRPHIGKKAEWEAALAEIDKEGYRPQLIFIDTGLVTELNAKNRAN 522

Query: 503 LVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEE--------------VDEAFAFW 548
            +E F+A+A  DG  A +  +     + C  P A I+                 + FA  
Sbjct: 523 FLELFRAIAEFDGYKAGKLMI-----ERCRQPDAVIDGDVFALRMQHLVLSVKSQTFALG 577

Query: 549 GTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
               GD+      + ++L  VR H V ++G+   V+++ L+LEG  R LDP  ++
Sbjct: 578 RIKIGDV------LSEVLSMVRSHHVRMEGDFVNVVISILLLEGIGRTLDPDLDL 626


>gi|449296694|gb|EMC92713.1| hypothetical protein BAUCODRAFT_259486 [Baudoinia compniacensis
           UAMH 10762]
          Length = 695

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 166/523 (31%), Positives = 248/523 (47%), Gaps = 111/523 (21%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE---------LWLHVVLRTLETAG 228
           +VE +    R L+L V+F P ++  P    FGP+  +          W   ++ ++E AG
Sbjct: 127 IVEPIATGFRFLHLVVIFVPVLVTIPLI-WFGPRQADRDNERSGTLWWYGFLVSSMERAG 185

Query: 229 PAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFE 288
            AFIK GQWAA+R D+FP  +C  +S LHS AP HS   TK+T+E+AFGR  ++IF+ F 
Sbjct: 186 AAFIKLGQWAASRTDIFPEQMCSIMSALHSNAPAHSLKVTKQTLEQAFGRPFNDIFEEFH 245

Query: 289 EAPVASGSIAQVHRASLR----------FRYPG------------------QKVKPIVVA 320
           E P+  G+IAQV++A L+           R P                   Q++    VA
Sbjct: 246 EKPLGVGAIAQVYKAKLKPDLAMLDDEDLRKPQSLREKAMKTVDPLLKSTPQRIPSSYVA 305

Query: 321 VKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAH 380
           +KV HP +   +RRD  I+   A I + IP ++WL   + V+QF   M  Q+DL  E+A+
Sbjct: 306 IKVLHPKIERIVRRDLRIMGFFANIINAIPTMEWLSFPDEVKQFGEMMRLQLDLRIESAN 365

Query: 381 LSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIG 440
           L+ F  NFR     SFP P        VLVE +  G  +  ++    G    +  +A  G
Sbjct: 366 LTIFRKNFRNRTTASFPYPYSQYTTRQVLVEEFATGIPLEHFLQ--NGGGVFQKEIADEG 423

Query: 441 THALLKMLLVDNFIHADMHPGNILVRVAQ------------------------KKSSQKR 476
             A L MLL+DNFIHAD+HPGNI+VR  +                        +  ++  
Sbjct: 424 LDAFLHMLLIDNFIHADLHPGNIMVRFYKPAVVDVGVNIHSFTGRPKASPENSRDVTEDV 483

Query: 477 LFRSKPH----------------------VIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           L R +PH                      +IF+D G+  EL+ T+R N ++ FKAVA  D
Sbjct: 484 LERLRPHRHEKGAWTETLAQIDKEGYRPQLIFIDTGLVTELNDTNRKNFLDLFKAVAEFD 543

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEE--------------VDEAFAFWGTPEGDLVHPAE 560
           G  A    +     + C  P+A I++                + FA      GD+     
Sbjct: 544 GYKAGHLMV-----ERCRQPEAVIDKEVFALRMQHLVLGVKSKTFALGNIKIGDI----- 593

Query: 561 CMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
            + ++L  VR H V ++G+   V+++ L+LEG  R LDP  ++
Sbjct: 594 -LNEVLSMVRGHHVRLEGDFVNVVLSILLLEGIGRSLDPNLDL 635


>gi|353240179|emb|CCA72060.1| related to aminoglycoside acetyltransferase regulator from P.
           stuartii [Piriformospora indica DSM 11827]
          Length = 706

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 166/526 (31%), Positives = 256/526 (48%), Gaps = 102/526 (19%)

Query: 186 MRALYLGVLFSPSIMMAPF-----ADS--FGPQFRELWLHVVL-RTLETAGPAFIKWGQW 237
           +R L+L ++FSP +  AP       DS   G ++  +W +  L R+++ AGP FIK  QW
Sbjct: 126 LRFLHLVIIFSPVVFTAPMLFIGVPDSKLGGERWGAIWWYDALTRSMQRAGPTFIKLAQW 185

Query: 238 AATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSI 297
           AA+R DLF  +LC +L  LHS    H   +T   +E+ F R   E+F+ F+  P+ SG+I
Sbjct: 186 AASRRDLFSMELCNRLGSLHSTTKPHHIGHTISVVEKVFSRPFVEVFESFDPEPIGSGAI 245

Query: 298 AQVHRASLR-------------------FRYPGQKVKPI-------------------VV 319
           AQV+RA+LR                   F +  +    +                   VV
Sbjct: 246 AQVYRATLRKDLLSEDYLSAKRPRTYSPFSHDTKGPLSLPVPLPPLTPDQPPPLSPTAVV 305

Query: 320 AVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAA 379
           AVKV HP VG+ IRRD  I++  A++ +++P V WL LD+ VQ F   M  Q+DL  EAA
Sbjct: 306 AVKVLHPKVGDMIRRDLSIMSFFARVLNLLPGVHWLSLDQEVQVFGSMMNEQLDLRHEAA 365

Query: 380 HLSRFIYNF--RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALA 437
           +L +F  NF  RR   VSFP+P+       +LVE ++    +  ++    G E   +A++
Sbjct: 366 NLKQFEDNFKNRRTAAVSFPRPLAEYTSHDLLVEEFQYAVPLGAFLR--WGGESYDTAIS 423

Query: 438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQK------KSSQKRLFRSKPHV------- 484
            +G  A L MLL+DNF+HAD+HPGNILV+  +       KS    LF SKP V       
Sbjct: 424 TMGLDAFLNMLLIDNFVHADLHPGNILVKFYKPTTSFVLKSIMASLFHSKPPVDPVKTSE 483

Query: 485 ------------------------------------IFLDVGMTAELSKTDRVNLVEFFK 508
                                               +FLD G+   LS+ +R N +E F+
Sbjct: 484 ADAVITDLLRIRKTGTRDEWRAALHRLHDEGYQPELVFLDAGLVTTLSERNRRNFLELFR 543

Query: 509 AVARRDGRTAAECTL-RLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL--VHPAECMQQL 565
           A+A  DG  A +  + R +  +   +P+ F  ++             L  +  ++ + Q+
Sbjct: 544 AIATFDGYRAGQLMISRSASPELAIDPETFALKMQHLILSVKAKTFSLGQIRISDVLSQV 603

Query: 566 LEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           L+ VR H V ++G+    +++ L+LEG  R+LDPG ++  +   +L
Sbjct: 604 LKNVREHHVKMEGDFVNTVISVLLLEGIGRQLDPGMDLFKSALPIL 649


>gi|326431643|gb|EGD77213.1| atypical/ABC1/ABC1-C protein kinase [Salpingoeca sp. ATCC 50818]
          Length = 646

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 149/446 (33%), Positives = 242/446 (54%), Gaps = 17/446 (3%)

Query: 173 SVLYSLVECVILLMRALYLGVLFSPSIMMAP--FADSF-GPQFRELWLHVVLRTLETAGP 229
           SV   +V  + +L R +   +LF+P ++  P  +A SF    F ++W   VL T++ +GP
Sbjct: 197 SVQSRIVRGLRVLRRIIRHLLLFTPVVLALPIAYALSFMSHHFIDIWWEWVLWTVQVSGP 256

Query: 230 AFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEE 289
           AFIK+ QWA++R DLF + +C + ++LH+   +H F  TKKT+  AFG    E  D    
Sbjct: 257 AFIKFVQWASSRRDLFDKQICDRFAQLHASVRKHPFEETKKTLTAAFGDGWDEYLD-VNG 315

Query: 290 APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVI 349
           +PV SG +AQV+RA+L     G++     VAVKV HP V   +  D  ++   A    +I
Sbjct: 316 SPVGSGCVAQVYRATLTAN--GEQHD---VAVKVIHPYVQRLVLDDIEVLRFIAWALELI 370

Query: 350 PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVL 409
           PA+KW    +SV++++  M++Q+DL  EA ++ RF  NF+R  DV+ P  +   V   VL
Sbjct: 371 PALKWTSAVDSVEEYSKLMITQLDLRNEARNMLRFYDNFKRVHDVTVPLVLPEFVSENVL 430

Query: 410 VETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQ 469
           +ETYE+G  +S      +    ++  LA        +M+   NF+H D+HPGN+ V+   
Sbjct: 431 IETYEEGTPISSM---FEADMPIRRRLARRCVEHFFRMMFDHNFVHGDLHPGNLRVKGVD 487

Query: 470 KKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQ 529
                         ++ LD G+  ELS  DRVN V+ F A+ +R+GR A +  L  ++  
Sbjct: 488 DTGEPT---GEDLQILLLDGGIATELSYRDRVNFVDLFSAIIQRNGREAGQLMLERTRLH 544

Query: 530 NCPNPKAFIEEVDEAFAFWGTPEGDL--VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTT 587
           +CP+P+ F++ +D+           L  V   E +Q++L  +  +RV ++ N  ++M+  
Sbjct: 545 DCPDPEGFVDAIDDLIRTAVDKGISLRRVRIGELLQRVLSLMCTYRVKIESNFTSIMIGI 604

Query: 588 LVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +V EG  R LDP  ++M     +LL+
Sbjct: 605 MVAEGVGRSLDPEVDLMKIAGPILLR 630


>gi|452839968|gb|EME41907.1| hypothetical protein DOTSEDRAFT_74080 [Dothistroma septosporum
           NZE10]
          Length = 703

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 168/529 (31%), Positives = 247/529 (46%), Gaps = 116/529 (21%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPF--------ADSFGPQFRELWLHVVLRTLETAGP 229
           +VE +   +R L+L ++F P I   P         A          W   ++ ++E AG 
Sbjct: 125 IVEPLATGLRFLHLVIIFVPVIATVPIIWLGARQHARDNERSGTLWWYGFLVSSMERAGA 184

Query: 230 AFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEE 289
           AFIK GQWAA+R D+FP+++C  +  LHS AP HS   TK+TIER+FGRR  +IF+ F E
Sbjct: 185 AFIKLGQWAASRTDIFPKEMCSIMGALHSNAPAHSLKVTKETIERSFGRRFEDIFEEFNE 244

Query: 290 APVASGSIAQVHRASLR----FRYPGQK----------------VKPIV----------- 318
            P+  G+IAQV++A L+       P Q                 V P++           
Sbjct: 245 KPLGVGAIAQVYKAKLKPDLAVGNPDQNDAGDEHPTLRERAMKSVDPLLKSTPERIPSTY 304

Query: 319 VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREA 378
           VA+KV HP +   +RRD  I+   A I + +P ++WL   + VQQF   M  Q+DL  EA
Sbjct: 305 VAIKVLHPKIERIVRRDLKIMGFFANIINAVPTMEWLSFPDEVQQFGEMMRLQLDLRIEA 364

Query: 379 AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAH 438
           A+L+ F  NFR      FP P        VLVE +  G  +  +++   G    +  LA 
Sbjct: 365 ANLTLFRKNFRNRPTAWFPYPYTQYTSRQVLVEEFATGIPLEHFLE--NGGGVFQKELAD 422

Query: 439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKR---------------------- 476
            G  A L MLL+DNFIHAD+HPGNI+VR  +  + + R                      
Sbjct: 423 EGLDAFLHMLLLDNFIHADLHPGNIMVRFYKPATIRGRTGFGDLKNKINKSAKGDVEGSE 482

Query: 477 ------LFRSKPH----------------------VIFLDVGMTAELSKTDRVNLVEFFK 508
                 L R +PH                      +IF+D G+  EL++T+R N +  FK
Sbjct: 483 DVTEDVLARLRPHRHDKTAWHETLTQIDHENYRPQLIFIDTGLVTELNETNRANFLALFK 542

Query: 509 AVARRDGRTAAECTLRLSKQQNCPNPKAFIEE--------------VDEAFAFWGTPEGD 554
           AVA  DG  A    +     + C  P+A I++                + FA      GD
Sbjct: 543 AVAEFDGYKAGHLMV-----ERCRQPEAVIDKEVFALRMQHLVLGVKSKTFALGNIKIGD 597

Query: 555 LVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           +      + ++L+ VR H V ++G+   V+++ L+LEG  R LDP  ++
Sbjct: 598 I------LNEVLDMVRGHHVRLEGDFINVVLSILLLEGIGRTLDPNMDL 640


>gi|428165390|gb|EKX34386.1| hypothetical protein GUITHDRAFT_80611 [Guillardia theta CCMP2712]
          Length = 426

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 146/429 (34%), Positives = 225/429 (52%), Gaps = 21/429 (4%)

Query: 190 YLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDL 249
           ++ + F  ++   PF    G    +LW    +  LE +GPAF+K GQWAATR D+FP+DL
Sbjct: 8   HIFIFFPLAVSYLPFR-LLGGSALDLWWRWAIAELERSGPAFVKLGQWAATRTDIFPQDL 66

Query: 250 CKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRY 309
           C +LS LHS A  H    +   +         ++    ++ P+ SG IAQVHRA +    
Sbjct: 67  CSRLSILHSNAQTHDIESSLDDLLLLMRNSGYQLL-SLDKTPIGSGCIAQVHRAVIM--- 122

Query: 310 PGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369
             +  +P+ VA+K+ HP V  +   D  ++   A +   +P ++WL L ESV++FA  M 
Sbjct: 123 --KDDEPMKVAIKIIHPEVPSTSYADIHLMLSLATLVEKLPRLRWLSLRESVEEFAGLMQ 180

Query: 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVD-ELQG 428
           +Q+DL  EA +L  F  NF+ W++V FP P+ PLV   +LVET + G  ++  +   L  
Sbjct: 181 NQIDLRVEANNLEMFSQNFKSWEEVKFPLPIRPLVSENILVETLQDGIPLAELISGNLSD 240

Query: 429 HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLD 488
              ++  +A IG  A L M    NFIH D+HPGN+LV   +  +   R       V FLD
Sbjct: 241 QTDIRRKVADIGMRAFLAMCFKHNFIHGDLHPGNVLVSFGEDNNGPIR-------VSFLD 293

Query: 489 VGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEE----VDEA 544
            G+T++LS  D+ N V  F AV +RDGR AA+  L  ++   C N +AF +     V++A
Sbjct: 294 AGITSQLSDRDKKNFVALFGAVVQRDGRLAAQLMLENARDHACDNVEAFCDGMERLVNDA 353

Query: 545 FAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
               G   G      + + Q       HRV ++ N   V +  +VL+G  R+LDP  +++
Sbjct: 354 LG-RGLVLGKF-RAGQILAQAFTLACLHRVKIESNFAAVCLAVMVLDGVGRELDPSLDLL 411

Query: 605 DTLQTLLLK 613
                ++L+
Sbjct: 412 QMAAPIVLR 420


>gi|159489046|ref|XP_001702508.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158280530|gb|EDP06287.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 692

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 162/453 (35%), Positives = 220/453 (48%), Gaps = 109/453 (24%)

Query: 193 VLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKK 252
           +LF P+++ AP A   G   RE WL +V  TLE AGPAFIKWGQWA+TRPDLFP DLC  
Sbjct: 117 MLFLPALVTAPLASLGGAAARERWLRLVQWTLENAGPAFIKWGQWASTRPDLFPEDLCLH 176

Query: 253 LSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFR---- 308
           L +L + AP HS A++  T++ AF   L E+F+ F E P+ASGSIAQ+H A+L  +    
Sbjct: 177 LEQLQTSAPAHSAAHSIATVQAAFDSPLGELFEVFSEQPLASGSIAQIHVATLSEKGAAL 236

Query: 309 YPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368
             G       VAVKVRHPGV   + RDF+++  AA + S +P +  LRL+ S        
Sbjct: 237 VGGGATAGATVAVKVRHPGVTGIMHRDFILMQRAAALCSRLPGLAELRLEVSTD------ 290

Query: 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG 428
                                                  VLVE++E+G+ ++RYV     
Sbjct: 291 ---------------------------------------VLVESFEEGDLITRYVRSPHR 311

Query: 429 HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKS---------------- 472
           H  +   LA  G    L M+L DNFIHAD+HPGN+LVR A   S                
Sbjct: 312 HNAM---LAQTGVDVFLTMMLKDNFIHADLHPGNLLVRPADPPSAAAVALASWLPASWAR 368

Query: 473 SQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCP 532
           ++  L    P ++ LD GM  ELS   + +L+ FFKA+   DGR  A   L +S   NC 
Sbjct: 369 ARSWLVDRSPAIVLLDTGMIVELSNQTQKSLMGFFKALTHMDGRRLAREILAMSVDGNC- 427

Query: 533 NPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEG 592
                                                   +V +  +V TV+VT+LVLEG
Sbjct: 428 ----------------------------------------KVTLRSSVSTVVVTSLVLEG 447

Query: 593 WQRKLDPGYNVMDTLQTLLLKADWAKSLSYTID 625
           W  KLDP   ++DT++ +L   +WA+ L   +D
Sbjct: 448 WSSKLDPDVRILDTMRDMLGTDNWAERLGGVVD 480


>gi|213401999|ref|XP_002171772.1| ABC1 family protein [Schizosaccharomyces japonicus yFS275]
 gi|211999819|gb|EEB05479.1| ABC1 family protein [Schizosaccharomyces japonicus yFS275]
          Length = 634

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 219/422 (51%), Gaps = 34/422 (8%)

Query: 215 LWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIER 274
           +WLH+++R +E +G  FIK GQWAA R D+ P  LC+ L +LHS+   H F +T+  +  
Sbjct: 157 VWLHLLVRQMERSGATFIKLGQWAALRTDMLPPILCRALCKLHSQGRPHGFPHTESVLLS 216

Query: 275 AFG-RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIR 333
           +FG  RL E+F+ FE  P+  GSIAQV+RA L  +Y  +K  P VV +K+ HPGV E + 
Sbjct: 217 SFGASRLQELFEVFENKPIGVGSIAQVYRAKLSPQYAPKKGSPWVV-LKIVHPGVEEQMH 275

Query: 334 RDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKD 393
            D   +   A + +++P +KWL L + V +FA  +  Q DL  EA +L RF +NF     
Sbjct: 276 IDLFFLRALASLINLVPTMKWLSLPQEVDEFATMLRKQTDLRCEANNLIRFQHNFNDRNY 335

Query: 394 VSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNF 453
           V FP  V  L    VLVE+Y +G  ++R++    G       LA IG  AL +ML+ DNF
Sbjct: 336 VLFPTVVKELTTKTVLVESYAEGIHLNRFLQAPGGP--FDHTLACIGEDALFQMLIRDNF 393

Query: 454 IHADMHPGNILVRVAQKKSSQKRLFRS--------------------------KPHVIFL 487
            HAD+HPGNILV++  K+  +KR+                             +P ++FL
Sbjct: 394 FHADLHPGNILVQLV-KRGRRKRVSMYDTSKLKENCSPEEWHETMQMLYDKGYRPRMVFL 452

Query: 488 DVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ-QNCPNPKAFIEEVDEAFA 546
           D G+   L   DR N ++ FK V   DG  A    +  S+Q +   N   F  +++    
Sbjct: 453 DAGLVVRLGDEDRRNFLDLFKTVLNLDGYQAGRLMVERSRQPERAINTHVFALKMENLLI 512

Query: 547 FWGTPEGDL--VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
                   L  V     +Q+++   R H V VD N   V+++ L++ G  R LDP  ++M
Sbjct: 513 RVSRQTFSLQKVQLGSILQEVMTMTREHHVRVDPNFANVVLSILLVSGIGRILDPDLDLM 572

Query: 605 DT 606
             
Sbjct: 573 SN 574


>gi|443683733|gb|ELT87890.1| hypothetical protein CAPTEDRAFT_82908, partial [Capitella teleta]
          Length = 493

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 150/478 (31%), Positives = 235/478 (49%), Gaps = 78/478 (16%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P   + W H+VL T+E  GP FIK GQWA+TR DLF  + C   S+LH+ +  HS+  TK
Sbjct: 19  PSATQTWWHLVLNTMEFTGPTFIKLGQWASTRRDLFSAEFCNFFSKLHNDSQTHSWKLTK 78

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA-------------------------- 303
           + +++AFG+   EIF   ++ P+ SG IAQVH+                           
Sbjct: 79  RKMKKAFGKNWKEIFVKLDKTPIGSGCIAQVHKGYMAADMIPDDALVWNSWASGPRMMTM 138

Query: 304 SLRF---RYPGQKVK--------------------PIV-VAVKVRHPGVGESIRRDFVII 339
           +LR     +P    +                    P++ VA+KV HP +G+ ++RD  I+
Sbjct: 139 NLRMTMMSFPSTNKRDAITEEEVLKAEESINDDDAPLIPVAIKVLHPHIGKRVKRDIEIL 198

Query: 340 NLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
            L  + +S+VIP + WL L E +++FA+ M  Q DL  EA  L  F  NF     V FP+
Sbjct: 199 RLLTRFVSTVIPFISWLSLPECMEEFAILMTKQTDLRFEAKCLEEFDENFHDIPSVRFPR 258

Query: 399 PVYPLVHPAVLVETYEQGECVSRYV-DELQGHERLKSALAHIGTHALLKMLLVDNFIHAD 457
           P+ P     VLVET+E+GE +S ++ D  +  E L+  +A  G  A+L+M+ VDNF+H D
Sbjct: 259 PIRPYCKSDVLVETFEEGEPISTFITDSSEDSESLREGIAICGVDAMLQMVFVDNFVHGD 318

Query: 458 MHPGNILVRVA----QKKSSQKRLF---------------RSKPHVIFLDVGMTAELSKT 498
           +HPGNILV+ A    Q K    +L                 +   ++ LDVG+T+ L   
Sbjct: 319 LHPGNILVQNADAFMQNKDCGNKLMLVDIGDTVLCDVKTPDNPLRLVLLDVGITSSLVNC 378

Query: 499 DRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEE----VDEAFAFWGTPEGD 554
           D  NL + F A+   +G   AE  LR ++   C + + F  E    V EA +   T   +
Sbjct: 379 DWNNLRKVFTALVLGEGEKVAELMLRHARSNECSDVEGFKRELAAIVMEARS---TVSLN 435

Query: 555 LVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLL 612
            +   + +  +     +H + ++ N  + ++   VLEG  R L P  ++++  +  +L
Sbjct: 436 QIQVGKLLSDVFSTCGKHHIKMESNFLSTILAIFVLEGIGRSLYPDLDILERAKPFIL 493


>gi|350287071|gb|EGZ68318.1| ABC1-domain-containing protein [Neurospora tetrasperma FGSC 2509]
          Length = 602

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 165/527 (31%), Positives = 256/527 (48%), Gaps = 96/527 (18%)

Query: 167 GHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPF-------ADSFGPQFRELWLH- 218
           G   V  + + + E +   +R L L  +F+P I+  P         D    +   LW + 
Sbjct: 28  GKKIVLFLDFYIWEPLCTGIRFLKLVAIFAPVIITVPVIWFGERQPDRDDERSGTLWWYG 87

Query: 219 VVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-G 277
            +++ +E AGPAFIK GQWAA+R D+FP ++C  +S+LH  AP HS   TK+ +E AF G
Sbjct: 88  FLVQAMEWAGPAFIKLGQWAASRSDIFPDEMCNIMSKLHDDAPAHSLHATKRIVEAAFNG 147

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLR-------------------------FRYPGQ 312
           R   EIF+ F+E P+  G+IAQV+RA L+                          +   +
Sbjct: 148 RHFDEIFEEFDEKPLGVGAIAQVYRAKLKPDLTMPADADLSSSTHRFVKNVGTVLKATPK 207

Query: 313 KVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQV 372
           +V    VA+KV HPGV  ++RRD  I+   A + + IP ++WL L + V QF   M  Q+
Sbjct: 208 RVPSSHVAIKVLHPGVERTVRRDLRIMRFFASMINAIPTLEWLSLPDEVDQFGDMMKLQL 267

Query: 373 DLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERL 432
           DL  EAA+LSRF  NF+      FP P        +LVE +  G  ++ ++    G    
Sbjct: 268 DLRIEAANLSRFRKNFKDRTTAWFPYPYTEFSTRNILVEEFAHGVPLADFM--ANGGGVF 325

Query: 433 KSALAHIGTHALLKMLLVDNFIHADMHPGNILVR-------------------------- 466
           +  +A  G  A L+MLL+DNF+HAD+HPGNI+VR                          
Sbjct: 326 QHDIASEGLDAFLRMLLLDNFVHADLHPGNIMVRFYESEKPPLSLHWDKPSDAHPTGKND 385

Query: 467 VAQKKSSQKRLFRS-----------------KPHVIFLDVGMTAELSKTDRVNLVEFFKA 509
           V +   S+ R +R+                 +P +IF+D G+  EL+ T+R N ++ F+A
Sbjct: 386 VTEHVLSRLRPYRNNKELWVAELEKIDEEGYRPQLIFIDTGLVTELNATNRRNFLDLFRA 445

Query: 510 VARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFW----------GTPEGDLVHPA 559
           VA  DG  A          + C  P A +++  E FA             T     +   
Sbjct: 446 VAEFDGYKAGHLMC-----ERCRQPDAVLDK--EVFALKMEHLVRDVKNKTLALGNIKIG 498

Query: 560 ECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           + ++++L  VR+H V ++G+   V+++ L+LEG  R LDP  +++ +
Sbjct: 499 DILEKVLNMVRQHHVRLEGDFVNVVISILLLEGIGRALDPDVDLLSS 545


>gi|336466083|gb|EGO54248.1| hypothetical protein NEUTE1DRAFT_124544 [Neurospora tetrasperma
           FGSC 2508]
          Length = 601

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 165/527 (31%), Positives = 256/527 (48%), Gaps = 96/527 (18%)

Query: 167 GHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPF-------ADSFGPQFRELWLH- 218
           G   V  + + + E +   +R L L  +F+P I+  P         D    +   LW + 
Sbjct: 27  GKKIVLFLDFYIWEPLCTGIRFLKLVAIFAPVIITVPVIWFGERQPDRDDERSGTLWWYG 86

Query: 219 VVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-G 277
            +++ +E AGPAFIK GQWAA+R D+FP ++C  +S+LH  AP HS   TK+ +E AF G
Sbjct: 87  FLVQAMEWAGPAFIKLGQWAASRSDIFPDEMCNIMSKLHDDAPAHSLHATKRIVEAAFNG 146

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLR-------------------------FRYPGQ 312
           R   EIF+ F+E P+  G+IAQV+RA L+                          +   +
Sbjct: 147 RHFDEIFEEFDEKPLGVGAIAQVYRAKLKPDLTMPADADLSSSTHRFVKNVGTVLKATPK 206

Query: 313 KVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQV 372
           +V    VA+KV HPGV  ++RRD  I+   A + + IP ++WL L + V QF   M  Q+
Sbjct: 207 RVPSSHVAIKVLHPGVERTVRRDLRIMRFFASMINAIPTLEWLSLPDEVDQFGDMMKLQL 266

Query: 373 DLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERL 432
           DL  EAA+LSRF  NF+      FP P        +LVE +  G  ++ ++    G    
Sbjct: 267 DLRIEAANLSRFRKNFKDRTTAWFPYPYTEFSTRNILVEEFAHGVPLADFM--ANGGGVF 324

Query: 433 KSALAHIGTHALLKMLLVDNFIHADMHPGNILVR-------------------------- 466
           +  +A  G  A L+MLL+DNF+HAD+HPGNI+VR                          
Sbjct: 325 QHDIASEGLDAFLRMLLLDNFVHADLHPGNIMVRFYESEKPPLSLHWDKPSDAHPTGKND 384

Query: 467 VAQKKSSQKRLFRS-----------------KPHVIFLDVGMTAELSKTDRVNLVEFFKA 509
           V +   S+ R +R+                 +P +IF+D G+  EL+ T+R N ++ F+A
Sbjct: 385 VTEHVLSRLRPYRNNKELWVAELEKIDEEGYRPQLIFIDTGLVTELNATNRRNFLDLFRA 444

Query: 510 VARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFW----------GTPEGDLVHPA 559
           VA  DG  A          + C  P A +++  E FA             T     +   
Sbjct: 445 VAEFDGYKAGHLMC-----ERCRQPDAVLDK--EVFALKMEHLVRDVKNKTLALGNIKIG 497

Query: 560 ECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           + ++++L  VR+H V ++G+   V+++ L+LEG  R LDP  +++ +
Sbjct: 498 DILEKVLNMVRQHHVRLEGDFVNVVISILLLEGIGRALDPDVDLLSS 544


>gi|406698546|gb|EKD01781.1| hypothetical protein A1Q2_03844 [Trichosporon asahii var. asahii CBS
            8904]
          Length = 1179

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 169/540 (31%), Positives = 257/540 (47%), Gaps = 121/540 (22%)

Query: 178  LVECVILLMRALYLGVLFSPSIMMAPF------------------ADSFGPQFRELWLHV 219
            ++E     +R ++L +LF P I+ AP                    D++G  +   W   
Sbjct: 596  IIEPFFTFLRFIHLALLFGPVILTAPMLMVGSTPRKRGRGAVADAEDNWGALW---WYSF 652

Query: 220  VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
            ++R +E AGP+FIK GQWAA+R DLFP  LC+K+S+LHS    H F++TKK IERAFG  
Sbjct: 653  LVRQMERAGPSFIKLGQWAASRTDLFPAALCEKMSKLHSNNNPHKFSHTKKVIERAFGMP 712

Query: 280  LSEIFDGFEEAPVASGSIAQVHRASLR----FRYPGQKVKPI--------------VVAV 321
            +SEIF+ F+E P+  G+IAQV+RA LR     + P +  + +               VA+
Sbjct: 713  MSEIFEEFDEKPIGCGAIAQVYRAKLRPEILTKTPAEAEQLVERMADQTGDERIVTSVAI 772

Query: 322  KVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHL 381
            KV HP V +++RRD  I+++ A   ++ P ++W+ L E V  F+  M  Q+DL  EA +L
Sbjct: 773  KVLHPRVAKTVRRDIAIMSVFANFINMFPGMEWISLPEEVAAFSGMMTQQLDLRVEANNL 832

Query: 382  SRFIYNF-RRWKDVSFPKPVY-------PLVHPAVLVETYEQGECVSRYVDELQGHERLK 433
              F  NF +R   V+FPK +        P     VLVE YE    +  ++    G     
Sbjct: 833  DTFQKNFAKRGNLVTFPKAIRLDRGNGDPDYQKDVLVEEYEDALPLKYFLS--NGGGPFD 890

Query: 434  SALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ------KRLFRSKP----- 482
            + +A+IG  A L+MLL+DNF H D+HPGNI+VR  Q           +RL   KP     
Sbjct: 891  AEMANIGLDAFLEMLLLDNFTHGDLHPGNIMVRFVQPVQGHIIGPFLQRLQGKKPPKDKG 950

Query: 483  -----------------------------------------HVIFLDVGMTAELSKTDRV 501
                                                      +IF+D G+   LS+ +R 
Sbjct: 951  SDIPTESKSETELVHELKGLAHDKDAWLKRLDELNEQGYIPQLIFIDAGLVTSLSEKNRR 1010

Query: 502  NLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFW----------GTP 551
            + ++ F+A+A  DG  A    +     + C  P   I+E  E FA             T 
Sbjct: 1011 DFLDLFQAIAEFDGYKAGTLMV-----ERCRRPDLAIDE--ELFALKIQHLVLNVKSKTF 1063

Query: 552  EGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
                +  ++ +  +L  VR+H V ++G+    +++ L+LEG  R+L+P    MD  Q+ L
Sbjct: 1064 SLAKIRISDVLSAVLTAVRQHHVKLEGDFVNTIISILLLEGIGRQLNPN---MDLFQSAL 1120


>gi|401886593|gb|EJT50620.1| hypothetical protein A1Q1_08172 [Trichosporon asahii var. asahii CBS
            2479]
          Length = 1164

 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 169/540 (31%), Positives = 257/540 (47%), Gaps = 121/540 (22%)

Query: 178  LVECVILLMRALYLGVLFSPSIMMAPF------------------ADSFGPQFRELWLHV 219
            ++E     +R ++L +LF P I+ AP                    D++G  +   W   
Sbjct: 592  IIEPFFTFLRFIHLALLFGPVILTAPMLMVGSTPRKRGRGAVADAEDNWGALW---WYSF 648

Query: 220  VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
            ++R +E AGP+FIK GQWAA+R DLFP  LC+K+S+LHS    H F++TKK IERAFG  
Sbjct: 649  LVRQMERAGPSFIKLGQWAASRTDLFPAALCEKMSKLHSNNNPHKFSHTKKVIERAFGMP 708

Query: 280  LSEIFDGFEEAPVASGSIAQVHRASLR----FRYPGQKVKPI--------------VVAV 321
            +SEIF+ F+E P+  G+IAQV+RA LR     + P +  + +               VA+
Sbjct: 709  MSEIFEEFDEKPIGCGAIAQVYRAKLRPEILTKTPAEAEQLVERMADQTGDERIVTSVAI 768

Query: 322  KVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHL 381
            KV HP V +++RRD  I+++ A   ++ P ++W+ L E V  F+  M  Q+DL  EA +L
Sbjct: 769  KVLHPRVAKTVRRDIAIMSVFANFINMFPGMEWISLPEEVAAFSGMMTQQLDLRVEANNL 828

Query: 382  SRFIYNF-RRWKDVSFPKPVY-------PLVHPAVLVETYEQGECVSRYVDELQGHERLK 433
              F  NF +R   V+FPK +        P     VLVE YE    +  ++    G     
Sbjct: 829  DTFQKNFAKRGNLVTFPKAIRLDRGNGDPDYQKDVLVEEYEDALPLKYFLS--NGGGPFD 886

Query: 434  SALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ------KRLFRSKP----- 482
            + +A+IG  A L+MLL+DNF H D+HPGNI+VR  Q           +RL   KP     
Sbjct: 887  AEMANIGLDAFLEMLLLDNFTHGDLHPGNIMVRFVQPVQGHIIGPFLQRLQGKKPPKDKG 946

Query: 483  -----------------------------------------HVIFLDVGMTAELSKTDRV 501
                                                      +IF+D G+   LS+ +R 
Sbjct: 947  SDIPTESKSETELVHELKGLAHDKDAWLKRLDELNEQGYIPQLIFIDAGLVTSLSEKNRR 1006

Query: 502  NLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFW----------GTP 551
            + ++ F+A+A  DG  A    +     + C  P   I+E  E FA             T 
Sbjct: 1007 DFLDLFQAIAEFDGYKAGTLMV-----ERCRRPDLAIDE--ELFALKIQHLVLNVKSKTF 1059

Query: 552  EGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
                +  ++ +  +L  VR+H V ++G+    +++ L+LEG  R+L+P    MD  Q+ L
Sbjct: 1060 SLAKIRISDVLSAVLTAVRQHHVKLEGDFVNTIISILLLEGIGRQLNPN---MDLFQSAL 1116


>gi|358370639|dbj|GAA87250.1| ubiquinone biosynthesis protein [Aspergillus kawachii IFO 4308]
          Length = 1207

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 165/523 (31%), Positives = 244/523 (46%), Gaps = 110/523 (21%)

Query: 187  RALYLGVLFSPSIMMAPFADSFGPQFRE---------LWLHVVLRTLETAGPAFIKWGQW 237
            R ++L ++F P I+ AP    FG Q ++          W   ++R++E AGPAFIK GQW
Sbjct: 654  RFVHLVIIFLPVILTAPTI-CFGKQLKDREGIRTGTLWWYRFLVRSMERAGPAFIKLGQW 712

Query: 238  AATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSEIFDGFEEAPVASGS 296
            AA+R D+FP +LC  +S LHS AP HS   TK+TI +AF      +IF+ F+E P+  G+
Sbjct: 713  AASRTDIFPPELCDIMSSLHSNAPAHSLHQTKRTIRKAFNWLPFEDIFEEFQEEPLGVGA 772

Query: 297  IAQVHRASLRFRYPG----------------------------QKVKPIVVAVKVRHPGV 328
            IAQV++A L+    G                            Q+V    VAVKV HP V
Sbjct: 773  IAQVYKAKLKPNLAGTDDDIDLHPHGLRDKVRKNVGALVKSSPQRVPSSYVAVKVLHPRV 832

Query: 329  GESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
               I RD  I++  A + + IP + WL L + V QF   M  Q+DL  EA +L  F   F
Sbjct: 833  ERVIHRDLKIMSFFASLVNAIPTMNWLSLPDEVHQFGEMMKLQLDLRIEATNLVMFREKF 892

Query: 389  RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML 448
            R      FP P        VLVE + QG  +S +++   G    +  +A+ G  A L ML
Sbjct: 893  RSRTTAWFPYPYLDYSTREVLVEEFAQGIPLSTFLE--VGGGVYQEEIANEGLDAFLHML 950

Query: 449  LVDNFIHADMHPGNILVR----------------------VAQKKSSQKRLFRSKPHV-- 484
            L+DNF+HAD+HPGNI+VR                        +   ++  L R +PH+  
Sbjct: 951  LIDNFVHADLHPGNIMVRFYRPSELDLSLGNKSRASEAPSAEEVDVTESVLARLRPHINN 1010

Query: 485  --------------------IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR 524
                                IF+D G+  +L++ +R N ++ F+A+A  DG  A E  + 
Sbjct: 1011 RRDWVKALDDLNTEGYRPQLIFIDTGLVTQLNELNRRNFIDLFRAIAEFDGYRAGELMV- 1069

Query: 525  LSKQQNCPNPKAFIEEV--------------DEAFAFWGTPEGDLVHPAECMQQLLEKVR 570
                + C  P A I+                   FA      GD+      +  +L  VR
Sbjct: 1070 ----ERCRQPDAVIDPYYFALGMEHLVLNIKSRTFALGSVKIGDV------LSDVLSMVR 1119

Query: 571  RHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +H V ++G+   V+++ L+LEG  R LDP  ++  +   +L K
Sbjct: 1120 KHHVRLEGDFVNVVISCLLLEGIGRNLDPNLDLFKSSLPILRK 1162


>gi|238508791|ref|XP_002385579.1| ubiquinone biosynthesis protein, putative [Aspergillus flavus
           NRRL3357]
 gi|220688471|gb|EED44824.1| ubiquinone biosynthesis protein, putative [Aspergillus flavus
           NRRL3357]
          Length = 686

 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 168/528 (31%), Positives = 250/528 (47%), Gaps = 98/528 (18%)

Query: 176 YSLVECVILLMRALYLGVLFSPSIMMAPFA-----DSFGPQFRE---LWLHVVLRTLETA 227
           Y + + +   +R  +L V+F P I+  P          G + R     W + ++R++E A
Sbjct: 116 YYIYDPIATGLRFAHLVVVFLPVILTVPVVWLGKRLKTGKEVRSGTLWWYNFLVRSMERA 175

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDG 286
           GPAFIK GQWAA+R D+FP +LC  +S LHS AP HS   TKKTI +AF G    +IF+ 
Sbjct: 176 GPAFIKLGQWAASRTDIFPPELCNIMSSLHSNAPSHSLQETKKTICKAFNGLPFEDIFEE 235

Query: 287 FEEAPVASGSIAQVHRASLR----------------------------FRYPGQKVKPIV 318
           F E P+  G+IAQV++A L+                             +   Q+V    
Sbjct: 236 FYEEPLGVGAIAQVYKARLKSNLAASQDQEALEIQGLRDKVRKNVDILMKSTPQRVPSSY 295

Query: 319 VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREA 378
           VAVKV HP V   IRRD  I++  A + + IP + WL L + V QF   M  Q+DL  EA
Sbjct: 296 VAVKVLHPKVERVIRRDLKIMSFFASLINAIPTMHWLSLPDEVHQFGEMMRLQLDLRIEA 355

Query: 379 AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAH 438
           ++L  F   F+      FP P        VLVE + QG  +S ++D   G    +  +AH
Sbjct: 356 SNLVMFREKFKSRTTAWFPYPYLDYTTREVLVEEFAQGIPLSTFLD--VGGGVFQQEIAH 413

Query: 439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKS----------------------SQKR 476
            G  A L MLL+DNF+HAD+HPGNI+VR  Q                         ++  
Sbjct: 414 EGLDAFLHMLLIDNFVHADLHPGNIMVRFYQPSELDLSLRKHTRASDAPTAADVDVTETV 473

Query: 477 LFRSKPH----------------------VIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           L R +PH                      +IF+D G+  +L+ T+R N ++ F+AVA  D
Sbjct: 474 LARLRPHAHSPEDWERILEQLNAEGYRPQLIFIDTGLVTQLNDTNRRNFLDLFRAVAEFD 533

Query: 515 GRTAAECTLRLSKQ-QNCPNPKAFIEEVD--------EAFAFWGTPEGDLVHPAECMQQL 565
           G  A +  +   +Q     +P+ F  ++           FA      GD+      + ++
Sbjct: 534 GYRAGQLMVERCRQPGEVTDPEVFALKMQHLVLSVKSRTFALGNISIGDV------LSEV 587

Query: 566 LEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           L  VR + V ++G+   V+++ L+LEG  R LDP  ++  +   +L K
Sbjct: 588 LSMVRGYHVRLEGDFVNVVISILLLEGIGRSLDPNLDLFKSALPILRK 635


>gi|164425527|ref|XP_960562.2| hypothetical protein NCU05600 [Neurospora crassa OR74A]
 gi|157070962|gb|EAA31326.2| hypothetical protein NCU05600 [Neurospora crassa OR74A]
          Length = 601

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 165/528 (31%), Positives = 256/528 (48%), Gaps = 97/528 (18%)

Query: 167 GHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAP---FADSFGPQFRE-----LWLH 218
           G   V  + + + E +   +R L L  +F+P I+  P   F +    +  E      W  
Sbjct: 26  GKKIVLFLDFYIWEPLCTGIRFLKLVAIFAPVIITVPVIWFGERQPDRDDERSGTLWWYG 85

Query: 219 VVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-G 277
            +++ +E AGPAFIK GQWAA+R D+FP ++C  +S+LH  AP HS   TK+ +E AF G
Sbjct: 86  FLVQAMEWAGPAFIKLGQWAASRSDIFPDEMCNIMSKLHDDAPAHSLHATKRIVEAAFNG 145

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLR-------------------------FRYPGQ 312
           R   EIF+ F+E P+  G+IAQV+RA L+                          +   +
Sbjct: 146 RHFDEIFEEFDEKPLGVGAIAQVYRAKLKPDLTMPADADLSSSTHRFVKNVGTVLKATPK 205

Query: 313 KVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQV 372
           +V    VA+KV HPGV  ++RRD  I+   A + + IP ++WL L + V QF   M  Q+
Sbjct: 206 RVPSSHVAIKVLHPGVERTVRRDLRIMRFFASMINAIPTLEWLSLPDEVDQFGDMMKLQL 265

Query: 373 DLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERL 432
           DL  EAA+LSRF  NF+      FP P        +LVE +  G  ++ ++    G    
Sbjct: 266 DLRIEAANLSRFRKNFKDRTTAWFPYPYTEFSTRNILVEEFAHGVPLADFM--ANGGGVF 323

Query: 433 KSALAHIGTHALLKMLLVDNFIHADMHPGNILVR-------------------------- 466
           +  +A  G  A L+MLL+DNF+HAD+HPGNI+VR                          
Sbjct: 324 QHDIASEGLDAFLRMLLLDNFVHADLHPGNIMVRFYESEKPPLSLHWDKPSDANPAGKNG 383

Query: 467 -VAQKKSSQKRLFRS-----------------KPHVIFLDVGMTAELSKTDRVNLVEFFK 508
            V +K  S+   +R+                 +P +IF+D G+  EL+ T+R N ++ F+
Sbjct: 384 DVTEKVLSRLWPYRNNKELWIAELEKIDEEGYRPQLIFIDTGLVTELNATNRRNFLDLFR 443

Query: 509 AVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFW----------GTPEGDLVHP 558
           AVA  DG  A          + C  P A +++  E FA             T     +  
Sbjct: 444 AVAEFDGYKAGHLMC-----ERCRQPDAVLDK--EVFALKMEHLVRDVKNKTLALGNIKI 496

Query: 559 AECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
            + ++++L  VR+H V ++G+   V+++ L+LEG  R LDP  +++ +
Sbjct: 497 GDILEKVLNMVRQHHVRLEGDFVNVVISILLLEGIGRALDPDVDLLSS 544


>gi|317157714|ref|XP_001826539.2| ubiquinone biosynthesis protein [Aspergillus oryzae RIB40]
 gi|391868542|gb|EIT77756.1| putative unusual protein kinase [Aspergillus oryzae 3.042]
          Length = 686

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 168/528 (31%), Positives = 250/528 (47%), Gaps = 98/528 (18%)

Query: 176 YSLVECVILLMRALYLGVLFSPSIMMAPFA-----DSFGPQFRE---LWLHVVLRTLETA 227
           Y + + +   +R  +L V+F P I+  P          G + R     W + ++R++E A
Sbjct: 116 YYIYDPIATGLRFAHLVVVFLPVILTVPVVWLGKRLKTGKEVRSGTLWWYNFLVRSMERA 175

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDG 286
           GPAFIK GQWAA+R D+FP +LC  +S LHS AP HS   TKKTI +AF G    +IF+ 
Sbjct: 176 GPAFIKLGQWAASRTDIFPPELCNIMSSLHSNAPSHSLQETKKTICKAFNGLPFEDIFEE 235

Query: 287 FEEAPVASGSIAQVHRASLR----------------------------FRYPGQKVKPIV 318
           F E P+  G+IAQV++A L+                             +   Q+V    
Sbjct: 236 FYEEPLGVGAIAQVYKARLKSNLAASQDQEALEIQGLRDKVRKNVDILMKSTPQRVPSSY 295

Query: 319 VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREA 378
           VAVKV HP V   IRRD  I++  A + + IP + WL L + V QF   M  Q+DL  EA
Sbjct: 296 VAVKVLHPKVERVIRRDLKIMSFFASLINAIPTMHWLSLPDEVHQFGEMMRLQLDLRIEA 355

Query: 379 AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAH 438
           ++L  F   F+      FP P        VLVE + QG  +S ++D   G    +  +AH
Sbjct: 356 SNLVMFREKFKSRTTAWFPYPYLDYTTREVLVEEFAQGIPLSTFLD--VGGGVFQQEIAH 413

Query: 439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKS----------------------SQKR 476
            G  A L MLL+DNF+HAD+HPGNI+VR  Q                         ++  
Sbjct: 414 EGLDAFLHMLLIDNFVHADLHPGNIMVRFYQPSELDLSLRKHTRASDAPTAADVDVTETV 473

Query: 477 LFRSKPH----------------------VIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           L R +PH                      +IF+D G+  +L+ T+R N ++ F+AVA  D
Sbjct: 474 LARLRPHAHSPEDWERILEQLNAEGYRPQLIFIDTGLVTQLNDTNRRNFLDLFRAVAEFD 533

Query: 515 GRTAAECTLRLSKQ-QNCPNPKAFIEEV--------DEAFAFWGTPEGDLVHPAECMQQL 565
           G  A +  +   +Q     +P+ F  ++           FA      GD+      + ++
Sbjct: 534 GYRAGQLMVERCRQPGEVTDPEVFALKMQHLVLSVKSRTFALGNISIGDV------LSEV 587

Query: 566 LEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           L  VR + V ++G+   V+++ L+LEG  R LDP  ++  +   +L K
Sbjct: 588 LSMVRGYHVRLEGDFVNVVISILLLEGIGRSLDPTLDLFKSALPILRK 635


>gi|428168107|gb|EKX37056.1| hypothetical protein GUITHDRAFT_116783 [Guillardia theta CCMP2712]
          Length = 593

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 165/493 (33%), Positives = 246/493 (49%), Gaps = 77/493 (15%)

Query: 179 VECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWA 238
           +  + L+ RA  L ++FSP   +A  A  F    RE W  ++ +TLE +G AFIKWGQWA
Sbjct: 66  IPLIDLVPRAFQLVLIFSPVGALAIPAYYF-EWMREFWYSLLRKTLELSGAAFIKWGQWA 124

Query: 239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAPVASGSI 297
           ATRPD+FP+++C  L  LH+  P HSF +T++ +  AF    L  IF   ++ P+ SGSI
Sbjct: 125 ATRPDIFPKEMCDHLKALHASVPPHSFEHTRQVLMDAFDAPNLEAIFAEIDDHPIGSGSI 184

Query: 298 AQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRL 357
           AQV++A    R+ G K     VA+KVRHP V   +  DF ++N AA + + +P ++W+ +
Sbjct: 185 AQVYKA----RFHGDKE---YVAIKVRHPEVEGRLLLDFALLNAAASLLNYVPGIQWMGI 237

Query: 358 DESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV--SFPKPVYPL-VHPAVLVETYE 414
            E++ QF   + +QV L  EA +L RF  NFR    +  SFP P   L   P +L+E++E
Sbjct: 238 QETLVQFGHTLGAQVRLDFEAINLERFKTNFRACPHITASFPIPRDGLHASPEILIESFE 297

Query: 415 QGECVSRY--------------------------------------------------VD 424
            G  V+ Y                                                  V+
Sbjct: 298 SGHSVASYCVAAVTAAAERAAKAANLTQSDTVNLPPRKFVRRVSGNFPEKTPDLTELVVE 357

Query: 425 ELQGHERLKSALAH------IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLF 478
           ++  HE    A  H       G    L+MLL DNFIHADMHPGNI+++   +KS +    
Sbjct: 358 QVTKHELQPLAQQHATHVVQTGKETYLQMLLADNFIHADMHPGNIILK---EKSGE---- 410

Query: 479 RSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFI 538
              P ++ +D GM   ++ +++ N +  FKA+   DG  AA   L  + +Q   + + F 
Sbjct: 411 --PPTLVLIDAGMVDVMTSSEQDNFIGLFKAMGAGDGLRAATHLLNFAHEQPYADVEGFR 468

Query: 539 EEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLD 598
             +D  F       G  V   + +Q +LE +RRH+V VD    T +V  L +E     LD
Sbjct: 469 IYMDSLFKKKCRGFGTNVDLGDVLQGVLEGLRRHKVRVDAQYATSVVNLLCIESIASALD 528

Query: 599 PGYNVMDTLQTLL 611
           P YN++D  + LL
Sbjct: 529 PNYNLLDESEMLL 541


>gi|366991547|ref|XP_003675539.1| hypothetical protein NCAS_0C01830 [Naumovozyma castellii CBS 4309]
 gi|342301404|emb|CCC69173.1| hypothetical protein NCAS_0C01830 [Naumovozyma castellii CBS 4309]
          Length = 604

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 174/592 (29%), Positives = 281/592 (47%), Gaps = 88/592 (14%)

Query: 89  HQAQIAWKRLFYYSSFRDQIF----------PCISRIAQAFSLALTRSPLLV-------P 131
           H A  +W+  F+Y S R + F          P +  I    +L+  RS +         P
Sbjct: 6   HSATHSWR--FFYQSARTRTFNISLRHLIVPPSLGIIYYNTTLSHNRSLIFNDKRLKPDP 63

Query: 132 GIIAFTSGQLAWAQRVSAETEYFPSQNA--FYTRAQDGHAFVTSVLYSLVECVILLMRAL 189
               F  G    +QR   +      +N+   +TR      F   +   ++E ++ ++R L
Sbjct: 64  NGDTFEMGLYLSSQRELQDQRQTALRNSSSIFTRITRQIWF--QITDHVIEPILTILRFL 121

Query: 190 YLGVLFSPSIMMAPF-------ADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRP 242
            L  LF P +++ P        ++  GP    +W  ++ + LE AGP+FIK GQWA++R 
Sbjct: 122 ELSTLFLPLLILYPITYCGPMTSEGRGPSGFIVWARLLKQVLEWAGPSFIKLGQWASSRN 181

Query: 243 DLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSEIFDGFEEAPVASGSIAQVH 301
           D+F + LC++L  LHS    HS  YT++T+ +        ++F+ F+E P+  G+IAQV+
Sbjct: 182 DIFDKVLCEQLGSLHSNVRPHSLQYTRETVCKVLKVEHFDDVFEEFQEVPLGVGAIAQVY 241

Query: 302 RASLRFRYPGQKVKPIVV-----AVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLR 356
              L   +  Q+   + +     A+K+ HP V + I RD  I+   A I   IP ++W+ 
Sbjct: 242 VGKLSSSFMDQQQYNLPLETNWCAMKIIHPRVRKQIDRDLKIMRFFATIIDNIPTMEWIS 301

Query: 357 LDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQG 416
           L   V+ F + M  Q+DL  EA +L RF  NF     V FP+ + PL H  +L E Y  G
Sbjct: 302 LPNEVENFTILMRLQLDLRIEALNLERFNKNFENSIQVKFPEVMLPLYHRNILFEEYIGG 361

Query: 417 ---ECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKK-- 471
              E   +  ++L   E  K+ ++     A LKML++D+FIHAD+HPGN+++R  +    
Sbjct: 362 FPMENFLKIKNKLNDDELCKN-VSDPFVDAFLKMLILDDFIHADLHPGNVMLRFVKTNRY 420

Query: 472 -----SSQKRLFRSK--------------------------PHVIFLDVGMTAELSKTDR 500
                SS++  FR                            P + F+D G+  EL+  +R
Sbjct: 421 DTEIISSEEESFRITHSLRKKYNANDPNFIEEMRYTLQNYMPQICFIDTGLITELNDKNR 480

Query: 501 VNLVEFFKAVARRDGRTAAECTLRLSKQ-QNCPNPKAFIEEVDE--------AFAFWGTP 551
           VN ++ F A+AR DG  A E  +  S+  +   N + F  +V++         F      
Sbjct: 481 VNFIDLFNALARFDGYRAGELMIERSRTPETAINKELFAAKVEKLTDTVKKRTFTLGTVS 540

Query: 552 EGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
            GDL      + Q+L  VR H V ++G+  +V+V  L+LEG  R+LDP  ++
Sbjct: 541 IGDL------LDQMLSMVRYHHVRMEGDFVSVVVAILLLEGIGRQLDPDMDL 586


>gi|400600238|gb|EJP67912.1| ABC1 family protein [Beauveria bassiana ARSEF 2860]
          Length = 692

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 165/534 (30%), Positives = 254/534 (47%), Gaps = 105/534 (19%)

Query: 168 HAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE---------LWLH 218
           H  +  + + + E +   +R L+L  +F P I+  P     G +  E          W  
Sbjct: 115 HKVLLFIDFYIWEPIFTGVRFLHLVAIFVPVIVSVPMM-WLGRRLPERDDERQGTLWWYS 173

Query: 219 VVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGR 278
            +++ +E AGPAFIK GQWAA+R D+FP +LC  +S+LHS AP HS   T+ T+E AFG 
Sbjct: 174 FLVKAMELAGPAFIKLGQWAASRSDIFPNELCDTMSKLHSNAPAHSMRVTRATVEEAFGG 233

Query: 279 R-LSEIFDGFEEAPVASGSIAQVHRASLR--FRYPGQ----------------------- 312
           R   EIFD F+E P+  G+IAQV++A L+     P                         
Sbjct: 234 RPFEEIFDEFDEKPLGVGAIAQVYKAKLKPDLASPADSDIAKDKHMADNVKHHVKTVLLS 293

Query: 313 ---KVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369
              +V    VA+KV HP V  ++RRD  I+   A + + IP ++WL L   V+QF   M 
Sbjct: 294 SPSRVPSTYVAIKVLHPHVERTVRRDLRIMGFFASMLNAIPTMEWLSLPGEVEQFGEMMK 353

Query: 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH 429
            Q+DL  EAA+L+ F  NF+      FP P        VL+E + QG  ++ +++   G 
Sbjct: 354 LQLDLRIEAANLATFRQNFKDRSTAWFPYPYTDFTTRNVLIEEFAQGIPLADFME--NGG 411

Query: 430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVR----------------------- 466
              +  +A  G  A L+MLL+DNF+HAD+HPGNI+VR                       
Sbjct: 412 GVFQHDIADEGLDAFLRMLLLDNFVHADLHPGNIMVRFYRSAKPELPELPPMRHAPDAPP 471

Query: 467 -------VAQKKSSQKRLFRS-----------------KPHVIFLDVGMTAELSKTDRVN 502
                  V ++   + R +R+                 +P ++F+D G+  EL+ T+R N
Sbjct: 472 PGVDPSDVTEEVLERLRPYRADRDAWQAELAKIDAEGFRPQLVFIDTGLVTELNATNRKN 531

Query: 503 LVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFW----------GTPE 552
            ++ F+AVA  DG  A          + C  P A +++  E FA             T  
Sbjct: 532 FLDLFRAVAEFDGYKAGHLMC-----ERCRQPDAVLDK--EVFALKMQHLVLSVKSRTLA 584

Query: 553 GDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
              V   + +QQ+L  VR H V ++G+   V+++ L+LEG  R L+P  +++ +
Sbjct: 585 LGNVKIGDILQQVLAMVRGHHVRLEGDFVNVVISILLLEGIGRSLNPDVDLLSS 638


>gi|440467789|gb|ELQ36988.1| ABC1 family protein [Magnaporthe oryzae Y34]
 gi|440486057|gb|ELQ65958.1| ABC1 family protein [Magnaporthe oryzae P131]
          Length = 650

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 169/524 (32%), Positives = 248/524 (47%), Gaps = 113/524 (21%)

Query: 187 RALYLGVLFSPSIMMAP-------FADSFGPQFRELWLH-VVLRTLETAGPAFIKWGQWA 238
           R L+L  +F P I   P         D    +   LW +  +++++E AGPAFIK GQWA
Sbjct: 79  RFLHLVCIFVPVIFAVPAIWIGRRLPDKDNERSGTLWWYGFLVQSMELAGPAFIKLGQWA 138

Query: 239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAPVASGSI 297
           A+R D+FP ++C+ +S LHS AP HS   T++ ++ AF GR   EIFD F+E P+  G+I
Sbjct: 139 ASRSDIFPTEMCETMSRLHSHAPAHSMHATRRIVQAAFDGRPFDEIFDEFDEKPLGVGAI 198

Query: 298 AQVHRASLR--FRYPG----------------------------QKVKPIVVAVKVRHPG 327
           AQV+RA L+     PG                            ++V    VA+KV HPG
Sbjct: 199 AQVYRAKLKPDLAAPGDVDLAGHDEQTARRKVRKNVETVLKSTPKRVPSTYVAIKVLHPG 258

Query: 328 VGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYN 387
           V  ++RRD  I+   A++ + IP + WL L + V QF   M  Q+DL  EAA+LS F  +
Sbjct: 259 VERTVRRDLRIMGFFARVLNAIPTIHWLSLPDEVDQFGEMMRLQLDLRIEAANLSLFRKH 318

Query: 388 FRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKM 447
           FR      FP P        VLVE + QG  ++ +++   G    +  +A  G  A L+M
Sbjct: 319 FRDRSTAWFPFPYTEFTTRNVLVEEFAQGIPLADFLE--NGGGVFQHDIAAEGLDAFLRM 376

Query: 448 LLVDNFIHADMHPGNILVRVAQ-----------KKSSQKR-------------------- 476
           LL+DNF+HAD+HPGNI+VR  Q           K+ SQ                      
Sbjct: 377 LLLDNFVHADLHPGNIMVRFYQAAQPDLPQMPLKRRSQNEGPPSQPPQNSESQVDVTEQV 436

Query: 477 LFRSKPH------------------------VIFLDVGMTAELSKTDRVNLVEFFKAVAR 512
           L R +PH                        +IF+D G+  EL+  +R N ++ F+AVA 
Sbjct: 437 LSRLRPHKGRENKAAWEEELRKIDDEGFRPQLIFIDTGLVTELNAKNRRNFLDLFRAVAE 496

Query: 513 RDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF----------WGTPEGDLVHPAECM 562
            DG  A          + C  P A +++  E FA             T     V   + +
Sbjct: 497 FDGYRAGVLMC-----ERCRQPDAVLDK--EVFALKMQKLVLDVKSSTLALGNVKIGDIL 549

Query: 563 QQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           Q +L  VR H V V+G+   V+++ L+LEG  R L+P  +++ +
Sbjct: 550 QSVLSMVRTHHVRVEGDFVNVVISILLLEGIGRSLNPDLDLLSS 593


>gi|83775284|dbj|BAE65406.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 558

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 166/518 (32%), Positives = 246/518 (47%), Gaps = 98/518 (18%)

Query: 176 YSLVECVILLMRALYLGVLFSPSIMMAPFA-----DSFGPQFRE---LWLHVVLRTLETA 227
           Y + + +   +R  +L V+F P I+  P          G + R     W + ++R++E A
Sbjct: 35  YYIYDPIATGLRFAHLVVVFLPVILTVPVVWLGKRLKTGKEVRSGTLWWYNFLVRSMERA 94

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDG 286
           GPAFIK GQWAA+R D+FP +LC  +S LHS AP HS   TKKTI +AF G    +IF+ 
Sbjct: 95  GPAFIKLGQWAASRTDIFPPELCNIMSSLHSNAPSHSLQETKKTICKAFNGLPFEDIFEE 154

Query: 287 FEEAPVASGSIAQVHRASLR----------------------------FRYPGQKVKPIV 318
           F E P+  G+IAQV++A L+                             +   Q+V    
Sbjct: 155 FYEEPLGVGAIAQVYKARLKSNLAASQDQEALEIQGLRDKVRKNVDILMKSTPQRVPSSY 214

Query: 319 VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREA 378
           VAVKV HP V   IRRD  I++  A + + IP + WL L + V QF   M  Q+DL  EA
Sbjct: 215 VAVKVLHPKVERVIRRDLKIMSFFASLINAIPTMHWLSLPDEVHQFGEMMRLQLDLRIEA 274

Query: 379 AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAH 438
           ++L  F   F+      FP P        VLVE + QG  +S ++D   G    +  +AH
Sbjct: 275 SNLVMFREKFKSRTTAWFPYPYLDYTTREVLVEEFAQGIPLSTFLD--VGGGVFQQEIAH 332

Query: 439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKS----------------------SQKR 476
            G  A L MLL+DNF+HAD+HPGNI+VR  Q                         ++  
Sbjct: 333 EGLDAFLHMLLIDNFVHADLHPGNIMVRFYQPSELDLSLRKHTRASDAPTAADVDVTETV 392

Query: 477 LFRSKPH----------------------VIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           L R +PH                      +IF+D G+  +L+ T+R N ++ F+AVA  D
Sbjct: 393 LARLRPHAHSPEDWERILEQLNAEGYRPQLIFIDTGLVTQLNDTNRRNFLDLFRAVAEFD 452

Query: 515 GRTAAECTLRLSKQ-QNCPNPKAFIEEVDE--------AFAFWGTPEGDLVHPAECMQQL 565
           G  A +  +   +Q     +P+ F  ++           FA      GD+      + ++
Sbjct: 453 GYRAGQLMVERCRQPGEVTDPEVFALKMQHLVLSVKSRTFALGNISIGDV------LSEV 506

Query: 566 LEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           L  VR + V ++G+   V+++ L+LEG  R LDP  ++
Sbjct: 507 LSMVRGYHVRLEGDFVNVVISILLLEGIGRSLDPTLDL 544


>gi|296412382|ref|XP_002835903.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629700|emb|CAZ80060.1| unnamed protein product [Tuber melanosporum]
          Length = 725

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 170/550 (30%), Positives = 259/550 (47%), Gaps = 122/550 (22%)

Query: 163 RAQDGHAFVTSVLYSL----VECVI----LLMRALYLGVLFSPSIMMAPFADSFGPQFRE 214
           RA  G   +  +L       ++CVI      +R ++L V+F P I+  P A   GP+  +
Sbjct: 112 RALSGQPLILRILKRAQLLAIKCVIEPIATGLRFVHLVVIFLPVILSIPLA-CIGPRQPD 170

Query: 215 ---------LWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSF 265
                     W   +++++E AGP FIK GQWAA+R D+FP ++C+ +S+LHS A  HS 
Sbjct: 171 RCSERIGTIWWYSFLIKSMERAGPTFIKLGQWAASRTDIFPAEMCEMMSKLHSDARAHSL 230

Query: 266 AYTKKTIERAF-GRRLSEIFDGFEEAPVASGSIAQVHRASLR------------------ 306
             TK+TI +AF GR   EIF+ F++ P+  G++AQV+RA L                   
Sbjct: 231 RDTKRTISQAFGGRHFDEIFEEFDQKPLGIGAVAQVYRAKLSPHLLPRLHELGETDFKKN 290

Query: 307 ---------FRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRL 357
                     + P Q V    VAVKV HP V  ++ RD  II   A + +++P ++WL L
Sbjct: 291 LRRKVDVLVKKAPYQGVPSSYVAVKVLHPKVDRTVHRDLRIIYFFASLLNLVPTLEWLSL 350

Query: 358 DESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGE 417
            + V +F+  M  Q+DL  EA +LSRF  NF     V+FP P        VL+E +  G 
Sbjct: 351 PDEVDKFSEMMRLQLDLRIEANNLSRFRSNFGDRTTVTFPLPYSNYTTREVLIEEFAHGV 410

Query: 418 CVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVR----------- 466
            +S +++   G    +  +A +G  A L ML++DNFIHAD+HPGNI+VR           
Sbjct: 411 PLSFFLE--SGAGPFRKEMADMGLDAFLHMLIMDNFIHADLHPGNIMVRFYKLEPLPSLS 468

Query: 467 -----VAQKKSS----------------------------QKRLF-----RSKPHVIFLD 488
                V  +K+S                            QK L        +P +IF+D
Sbjct: 469 QFPLVVPGRKASARGADNHKEVTEEVISRLIPHRGNPQEWQKELNLLDNEGYRPQLIFID 528

Query: 489 VGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEE-------- 540
            G+  EL+  +R N ++ F+A+A  DG       +     + C +P A I+         
Sbjct: 529 TGLVTELNSVNRRNFLDLFRAIAEFDGYRVGHLMI-----ERCRSPSAVIDNEIFTLKMQ 583

Query: 541 ------VDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQ 594
                      A      GDL      + Q+L+ VR H V ++G+   V+++ L+LEG  
Sbjct: 584 HLILAVKSRTLALGNIKIGDL------LTQVLQMVRVHHVRMEGDFINVVLSILLLEGIG 637

Query: 595 RKLDPGYNVM 604
           R LDP  +++
Sbjct: 638 RSLDPNLDLL 647


>gi|453083132|gb|EMF11178.1| ABC1-domain-containing protein [Mycosphaerella populorum SO2202]
          Length = 705

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 165/527 (31%), Positives = 246/527 (46%), Gaps = 114/527 (21%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAP--FADSFGPQFRE------LWLHVVLRTLETAGP 229
           LVE +    R ++L ++F P I+  P  +  +  P   +       W   ++ ++E AG 
Sbjct: 132 LVEPIATGFRFVHLVIIFVPVIVSVPVMWLGARNPDKDDERSGTIWWYGFLVSSMERAGA 191

Query: 230 AFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEE 289
           AFIK GQWAA+R D+FP+ +C  +S LHS AP HSF  TK+TIERAFGR+  +IF+ F+E
Sbjct: 192 AFIKLGQWAASRTDIFPQQMCAIMSSLHSDAPAHSFEITKETIERAFGRKFEDIFEEFDE 251

Query: 290 APVASGSIAQVHRASLRFRYPG-----------------QKVKPIV-----------VAV 321
            P+  G+IAQV++A L+                      + V P++           VA+
Sbjct: 252 TPLGVGAIAQVYKAKLKSDLAATDDEAADKPKNFTERAMKTVDPLLKITPHREPSKYVAI 311

Query: 322 KVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHL 381
           KV HP +   +RRD  I+   A I + IP ++W    + V+QF   M  Q+DL  EAA+L
Sbjct: 312 KVLHPKIERIVRRDLKIMGAFASIINAIPTMEWFSFPDEVKQFGEMMRLQLDLRIEAANL 371

Query: 382 SRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGT 441
           + F  NFR      FP P        VLVE +  G  +  ++    G    +  +A  G 
Sbjct: 372 TIFRKNFRNRSTAWFPYPYTQYTTRQVLVEEFATGIPLEHFLR--NGGGVFQKEIADEGL 429

Query: 442 HALLKMLLVDNFIHADMHPGNILVR---------------------VAQKKSSQK----- 475
            A L MLL+DNFIHAD+HPGNI+VR                     V   K   K     
Sbjct: 430 DAFLHMLLIDNFIHADLHPGNIMVRFYKPATMHERTEIGTRIREKFVGDPKPDAKNGEDV 489

Query: 476 --------RLFRS-----------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAV 510
                   R +R                  +P +IF+D G+  EL++ +R N ++ FK+V
Sbjct: 490 TEHVLARLRPYRHEKEAWLNELAQIDKENFRPQLIFIDAGLVTELNEKNRRNFLDLFKSV 549

Query: 511 ARRDGRTAAECTLRLSKQQNCPNPKAFIEE--------------VDEAFAFWGTPEGDLV 556
           A  DG  +    +     + C  P A I+E                  FA      GD+ 
Sbjct: 550 AEFDGYKSGRLMV-----ERCRQPDAVIDEEVFALRMQHLVLGVKSRTFALGNIKIGDI- 603

Query: 557 HPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
                + ++L+ VR H V ++G+   V+++ L+LEG  R LDP  ++
Sbjct: 604 -----LNEVLDMVRSHHVRLEGDFVNVVLSILLLEGIGRTLDPDLDL 645


>gi|255720613|ref|XP_002545241.1| ABC1 family protein [Candida tropicalis MYA-3404]
 gi|240135730|gb|EER35283.1| ABC1 family protein [Candida tropicalis MYA-3404]
          Length = 667

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 164/519 (31%), Positives = 248/519 (47%), Gaps = 100/519 (19%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE-----------LWLHVVLRTLET 226
           +++ +I   R + L  +F P ++ +P    FG + R            LW   +  + E 
Sbjct: 130 VIDPMITFTRFVELSCIFIPVLLASPIC-WFGRKHRSEDGNLVRTGATLWYRYLRWSAEV 188

Query: 227 AGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR-LSEIFD 285
           AG +FIK GQWAA+R D+FP ++C +L  LHS A  HS   TKK +  +FG     EIFD
Sbjct: 189 AGASFIKLGQWAASRTDIFPSEMCTELGRLHSNAKAHSLEVTKKIVSSSFGNLPFDEIFD 248

Query: 286 GFEEAPVASGSIAQVHRASL------RFRYPGQKVKPIV--------------------- 318
            F+  P+  G+IAQV+   L      R +    +V+ I+                     
Sbjct: 249 EFQAKPLGVGAIAQVYLGKLSPKVLQRAKEDEGRVERILEEHKSSKGELFFENLVVTEHL 308

Query: 319 -----VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVD 373
                VA+KV HP V   I RD  I+N  A   ++IP ++WL L + V+QFA+ M  Q+D
Sbjct: 309 NSNEYVAIKVLHPNVEIKINRDLKIMNFFANFINIIPTMEWLSLPDEVEQFAILMRLQLD 368

Query: 374 LAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH-ERL 432
           L  EA +L++F  NF+   D+ FPKP        VLVE Y     +S+ +     + + L
Sbjct: 369 LRIEALNLAKFRENFKSRLDIHFPKPYLNFTTRDVLVEEYIHAIPMSKLLSLADNYGKNL 428

Query: 433 KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQK------------KSSQK----- 475
              ++  G  A LKML++DNF+HAD+HPGN++VR  +             KSS +     
Sbjct: 429 SKEVSDKGLDAFLKMLILDNFVHADLHPGNMMVRFYKNEMYRHKKEYKIVKSSNEAETNR 488

Query: 476 --------------------RLFRSKPH--VIFLDVGMTAELSKTDRVNLVEFFKAVARR 513
                                L+    H  + FLDVG+  EL+  DRV+ ++ FKA++  
Sbjct: 489 ITNELLKLGNDANAWCVRLAELYEEGYHAEICFLDVGLVTELNAKDRVDFIDLFKALSEF 548

Query: 514 DGRTAAECTLRLSKQ-QNCPNPKAFIEEVDE--------AFAFWGTPEGDLVHPAECMQQ 564
           DG  A E  +  S+  +   N + F  +V++         F       GDL      + Q
Sbjct: 549 DGYKAGELMVERSRTPETALNKEIFALKVEKLVDRMKQRTFTLGNISIGDL------LDQ 602

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           +L  VR H V ++G+  TV+V  L+LEG  R+LDP  ++
Sbjct: 603 VLGMVRNHHVRMEGDFVTVVVAILLLEGIGRQLDPNLDL 641


>gi|317034562|ref|XP_001400654.2| ubiquinone biosynthesis protein [Aspergillus niger CBS 513.88]
          Length = 687

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 165/523 (31%), Positives = 243/523 (46%), Gaps = 110/523 (21%)

Query: 187 RALYLGVLFSPSIMMAPFADSFGPQFRE---------LWLHVVLRTLETAGPAFIKWGQW 237
           R ++L ++F P I+ AP    FG Q ++          W   ++R++E AGPAFIK GQW
Sbjct: 128 RFVHLVIIFLPVILTAPTI-CFGKQLKDREGIRTGTLWWYRFLVRSMERAGPAFIKLGQW 186

Query: 238 AATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSEIFDGFEEAPVASGS 296
           AA+R D+FP +LC  +S LHS AP HS   TK+TI +AF      +IF+ F+E P+  G+
Sbjct: 187 AASRTDIFPPELCDIMSSLHSNAPAHSLHQTKRTIRKAFNWLPFEDIFEEFQEEPLGVGA 246

Query: 297 IAQVHRASLRFRYPG----------------------------QKVKPIVVAVKVRHPGV 328
           IAQV++A L+    G                            Q+V    VAVKV HP V
Sbjct: 247 IAQVYKAKLKPNLAGTDDDIDLHPHGLRDKVRKNVGALVKSSPQRVPSSYVAVKVLHPRV 306

Query: 329 GESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
              I RD  I++  A + + IP + WL L + V QF   M  Q+DL  EA +L  F   F
Sbjct: 307 ERVIHRDLKIMSFFASLINAIPTMNWLSLPDEVHQFGEMMKLQLDLRIEATNLVMFREKF 366

Query: 389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML 448
           R      FP P        VLVE + QG  +S +++   G    +  +A+ G  A L ML
Sbjct: 367 RSRTTAWFPYPYLDYSTREVLVEEFAQGIPLSTFLE--VGGGVYQEEIANEGLDAFLHML 424

Query: 449 LVDNFIHADMHPGNILVR----------------------VAQKKSSQKRLFRSKPHV-- 484
           L+DNF+HAD+HPGNI+VR                        +   ++  L R +PH+  
Sbjct: 425 LIDNFVHADLHPGNIMVRFYRPSELDLSLGNKSRASEAPSAEEVDVTESVLARLRPHIDN 484

Query: 485 --------------------IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR 524
                               IF+D G+  +L+  +R N ++ F+A+A  DG  A E  + 
Sbjct: 485 RRDWVKALDDLNAEGYRPQLIFIDTGLVTQLNDLNRRNFIDLFRAIAEFDGYRAGELMV- 543

Query: 525 LSKQQNCPNPKAFIEEV--------------DEAFAFWGTPEGDLVHPAECMQQLLEKVR 570
               + C  P A I+                   FA      GD+      +  +L  VR
Sbjct: 544 ----ERCRQPDAVIDPYYFALGMEHLVLNIKSRTFALGSVKIGDV------LSDVLSMVR 593

Query: 571 RHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +H V ++G+   V+++ L+LEG  R LDP  ++  +   +L K
Sbjct: 594 KHHVRLEGDFVNVVISCLLLEGIGRNLDPNLDLFKSSLPILRK 636


>gi|389625671|ref|XP_003710489.1| atypical/ABC1/ABC1-C protein kinase [Magnaporthe oryzae 70-15]
 gi|351650018|gb|EHA57877.1| atypical/ABC1/ABC1-C protein kinase [Magnaporthe oryzae 70-15]
          Length = 729

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 169/524 (32%), Positives = 248/524 (47%), Gaps = 113/524 (21%)

Query: 187 RALYLGVLFSPSIMMAP-------FADSFGPQFRELWLH-VVLRTLETAGPAFIKWGQWA 238
           R L+L  +F P I   P         D    +   LW +  +++++E AGPAFIK GQWA
Sbjct: 158 RFLHLVCIFVPVIFAVPAIWIGRRLPDKDNERSGTLWWYGFLVQSMELAGPAFIKLGQWA 217

Query: 239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAPVASGSI 297
           A+R D+FP ++C+ +S LHS AP HS   T++ ++ AF GR   EIFD F+E P+  G+I
Sbjct: 218 ASRSDIFPTEMCETMSRLHSHAPAHSMHATRRIVQAAFDGRPFDEIFDEFDEKPLGVGAI 277

Query: 298 AQVHRASLR--FRYPG----------------------------QKVKPIVVAVKVRHPG 327
           AQV+RA L+     PG                            ++V    VA+KV HPG
Sbjct: 278 AQVYRAKLKPDLAAPGDVDLAGHDEQTARRKVRKNVETVLKSTPKRVPSTYVAIKVLHPG 337

Query: 328 VGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYN 387
           V  ++RRD  I+   A++ + IP + WL L + V QF   M  Q+DL  EAA+LS F  +
Sbjct: 338 VERTVRRDLRIMGFFARVLNAIPTIHWLSLPDEVDQFGEMMRLQLDLRIEAANLSLFRKH 397

Query: 388 FRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKM 447
           FR      FP P        VLVE + QG  ++ +++   G    +  +A  G  A L+M
Sbjct: 398 FRDRSTAWFPFPYTEFTTRNVLVEEFAQGIPLADFLE--NGGGVFQHDIAAEGLDAFLRM 455

Query: 448 LLVDNFIHADMHPGNILVRVAQ-----------KKSSQKR-------------------- 476
           LL+DNF+HAD+HPGNI+VR  Q           K+ SQ                      
Sbjct: 456 LLLDNFVHADLHPGNIMVRFYQAAQPDLPQMPLKRRSQNEGPPSQPPQNSESQVDVTEQV 515

Query: 477 LFRSKPH------------------------VIFLDVGMTAELSKTDRVNLVEFFKAVAR 512
           L R +PH                        +IF+D G+  EL+  +R N ++ F+AVA 
Sbjct: 516 LSRLRPHKGRENKAAWEEELRKIDDEGFRPQLIFIDTGLVTELNAKNRRNFLDLFRAVAE 575

Query: 513 RDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF----------WGTPEGDLVHPAECM 562
            DG  A          + C  P A +++  E FA             T     V   + +
Sbjct: 576 FDGYRAGVLMC-----ERCRQPDAVLDK--EVFALKMQKLVLDVKSSTLALGNVKIGDIL 628

Query: 563 QQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           Q +L  VR H V V+G+   V+++ L+LEG  R L+P  +++ +
Sbjct: 629 QSVLSMVRTHHVRVEGDFVNVVISILLLEGIGRSLNPDLDLLSS 672


>gi|336276486|ref|XP_003352996.1| hypothetical protein SMAC_03314 [Sordaria macrospora k-hell]
 gi|380092481|emb|CCC09758.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 829

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 152/476 (31%), Positives = 228/476 (47%), Gaps = 94/476 (19%)

Query: 216 WLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           W   +++ +E AGPAFIK GQWAA+R D+FP ++C  +S+LH+ AP HS   TK+ +E A
Sbjct: 306 WYGFLVQAMEWAGPAFIKLGQWAASRSDIFPDEMCNIMSKLHADAPAHSLNATKRIVEEA 365

Query: 276 FG-RRLSEIFDGFEEAPVASGSIAQVHRASLR-------------------------FRY 309
           FG R   EIF+ F+E P+  G+IAQV+RA L+                          + 
Sbjct: 366 FGGRHFDEIFEEFDEKPLGVGAIAQVYRAKLKPDLTMPADADVSDSSRRFAKNVGTVLKS 425

Query: 310 PGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369
             ++V    VA+KV HPGV  ++RRD  I+   A++ + IP ++WL L + V QF   M 
Sbjct: 426 TPKRVPSSYVAIKVLHPGVERTVRRDLRIMGFFARMINAIPTLEWLSLPDEVDQFGEMMK 485

Query: 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH 429
            Q+DL  EAA+LS F  NF+      FP P        VLVE +  G  ++ ++    G 
Sbjct: 486 LQLDLRIEAANLSMFRKNFKDRTTAWFPYPYTEFSTRNVLVEEFAHGIPLADFM--ANGG 543

Query: 430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSK-------- 481
              +  +A  G  A L+MLL+DNF+HAD+HPGNI+VR  +       L   K        
Sbjct: 544 GVFQKEIASEGLDAFLRMLLLDNFVHADLHPGNIMVRFYESDKPTLSLHWDKPSDAHPEN 603

Query: 482 -----------------------------------------PHVIFLDVGMTAELSKTDR 500
                                                    P +IF+D G+  EL+ T+R
Sbjct: 604 AAGSKKNGDVTEHVLARLRPYKHNKEAWDAELEKIDKEGYRPQLIFIDTGLVTELNATNR 663

Query: 501 VNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF------WGTPEGD 554
            N ++ F+AVA  DG  A          + C  P   +++  E FA        G     
Sbjct: 664 ANFLDLFRAVAEFDGYKAGHLMC-----ERCRQPDVVLDK--EVFALKMQHLVLGVKNKT 716

Query: 555 L----VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           L    +   + +Q +L  VR+H V ++G+   V+++ L+LEG  R LDP  +++ +
Sbjct: 717 LALGNIKIGDILQNVLNMVRQHHVRLEGDFVNVVISILLLEGIGRSLDPDVDLLSS 772


>gi|134081321|emb|CAK41824.1| unnamed protein product [Aspergillus niger]
          Length = 582

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 163/513 (31%), Positives = 239/513 (46%), Gaps = 110/513 (21%)

Query: 187 RALYLGVLFSPSIMMAPFADSFGPQFRE---------LWLHVVLRTLETAGPAFIKWGQW 237
           R ++L ++F P I+ AP    FG Q ++          W   ++R++E AGPAFIK GQW
Sbjct: 68  RFVHLVIIFLPVILTAPTI-CFGKQLKDREGIRTGTLWWYRFLVRSMERAGPAFIKLGQW 126

Query: 238 AATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSEIFDGFEEAPVASGS 296
           AA+R D+FP +LC  +S LHS AP HS   TK+TI +AF      +IF+ F+E P+  G+
Sbjct: 127 AASRTDIFPPELCDIMSSLHSNAPAHSLHQTKRTIRKAFNWLPFEDIFEEFQEEPLGVGA 186

Query: 297 IAQVHRASLRFRYPG----------------------------QKVKPIVVAVKVRHPGV 328
           IAQV++A L+    G                            Q+V    VAVKV HP V
Sbjct: 187 IAQVYKAKLKPNLAGTDDDIDLHPHGLRDKVRKNVGALVKSSPQRVPSSYVAVKVLHPRV 246

Query: 329 GESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
              I RD  I++  A + + IP + WL L + V QF   M  Q+DL  EA +L  F   F
Sbjct: 247 ERVIHRDLKIMSFFASLINAIPTMNWLSLPDEVHQFGEMMKLQLDLRIEATNLVMFREKF 306

Query: 389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML 448
           R      FP P        VLVE + QG  +S +++   G    +  +A+ G  A L ML
Sbjct: 307 RSRTTAWFPYPYLDYSTREVLVEEFAQGIPLSTFLE--VGGGVYQEEIANEGLDAFLHML 364

Query: 449 LVDNFIHADMHPGNILVR----------------------VAQKKSSQKRLFRSKPHV-- 484
           L+DNF+HAD+HPGNI+VR                        +   ++  L R +PH+  
Sbjct: 365 LIDNFVHADLHPGNIMVRFYRPSELDLSLGNKSRASEAPSAEEVDVTESVLARLRPHIDN 424

Query: 485 --------------------IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR 524
                               IF+D G+  +L+  +R N ++ F+A+A  DG  A E  + 
Sbjct: 425 RRDWVKALDDLNAEGYRPQLIFIDTGLVTQLNDLNRRNFIDLFRAIAEFDGYRAGELMV- 483

Query: 525 LSKQQNCPNPKAFIEEV--------------DEAFAFWGTPEGDLVHPAECMQQLLEKVR 570
               + C  P A I+                   FA      GD+      +  +L  VR
Sbjct: 484 ----ERCRQPDAVIDPYYFALGMEHLVLNIKSRTFALGSVKIGDV------LSDVLSMVR 533

Query: 571 RHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           +H V ++G+   V+++ L+LEG  R LDP  ++
Sbjct: 534 KHHVRLEGDFVNVVISCLLLEGIGRNLDPNLDL 566


>gi|336376997|gb|EGO05332.1| hypothetical protein SERLA73DRAFT_174442 [Serpula lacrymans var.
           lacrymans S7.3]
 gi|336390041|gb|EGO31184.1| hypothetical protein SERLADRAFT_455957 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 702

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 159/549 (28%), Positives = 257/549 (46%), Gaps = 110/549 (20%)

Query: 164 AQDGHAFVTSVLYSLVE----CVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE----- 214
           A+  H+FV+ +L  L E     ++   R ++L  LF P I+  P      P+ R      
Sbjct: 106 AEPHHSFVSRILTLLREHMWEPLLTARRFIHLFYLFVPVIVTMPMLLMGKPERRYHGDRW 165

Query: 215 ---LWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKT 271
               W   ++R +E AGP FIK  QWAA+R DLFP  LC ++  +HS    HS A+TK+ 
Sbjct: 166 GAVWWYGFLVRRMEAAGPTFIKLAQWAASRADLFPSILCNRMGAMHSHGKPHSLAHTKRV 225

Query: 272 IERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRF--------------RYPGQKVKPI 317
           IE  F R   ++F+ F+E P+ +G+IAQV+RA+L+               + P   + P+
Sbjct: 226 IEDVFQRPFEDVFEEFDEKPIGTGAIAQVYRATLKHDLIPPSYLGPKRHSKSPAASIAPV 285

Query: 318 V------------VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFA 365
           +            VA+KV HP VG+ I RD  I++  A I +++P ++W+ L E V+ F 
Sbjct: 286 ILQDPPPLVPTASVAIKVLHPRVGKMIARDLSIMSFFAHIITLLPGMQWISLPEEVEVFG 345

Query: 366 VFMMSQVDLAREAAHLSRFIYNFR-RWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVD 424
             M  Q+DL  EA +L  F  NF  R   V+FP+P+       +LVE YE    +  ++ 
Sbjct: 346 QMMYQQIDLRHEAENLLTFESNFAPRNVPVTFPRPLKVFSTKNLLVEEYENALPLETFLK 405

Query: 425 ELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQK--------- 475
              G       +A +G  A L MLL+DNF+H+D+HPGNI+++  +  ++Q          
Sbjct: 406 --NGGGPFDDQMATVGLDAFLNMLLLDNFVHSDLHPGNIMIKFTKPPTTQDLLRNVFNSL 463

Query: 476 --------------------------RLFRSKP-----------------HVIFLDVGMT 492
                                     R  R  P                  ++F+D G+ 
Sbjct: 464 FGGHNGTHKQHVMTSQSESDAIVGRLRELRHSPTEWREELKELSEAGYIPEIVFIDAGLV 523

Query: 493 AELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF----- 547
             L+ T+R N ++ F+AVA  DG    +  +     + C  P+  IE   E FA      
Sbjct: 524 TTLNATNRKNFLDLFRAVAEFDGYRTGQLMV-----ERCRTPELAIE--TETFALRMQHI 576

Query: 548 -----WGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYN 602
                  T     +  ++ + ++L+ VR+H V ++G+    +++ L+LEG  R+LDP  +
Sbjct: 577 VLSVKRKTFSLGQIKISDILTEVLKAVRQHHVKMEGDFINTVISILLLEGIGRQLDPSLD 636

Query: 603 VMDTLQTLL 611
           +  +   +L
Sbjct: 637 LFKSALPIL 645


>gi|291413296|ref|XP_002722912.1| PREDICTED: aarF domain containing kinase 2 [Oryctolagus cuniculus]
          Length = 608

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 150/479 (31%), Positives = 234/479 (48%), Gaps = 75/479 (15%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P+   LWLH++L+  ET+GP +IK GQWA+TR DLF    C + S+LH +   H++A+T+
Sbjct: 113 PRVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSDAFCARFSKLHVQVQPHAWAHTQ 172

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVH----RASL-------------------- 305
           + +++AFG R   +       PV SG +AQV+    R +L                    
Sbjct: 173 RALQQAFGERWDSVLVFENREPVGSGCVAQVYKAYARTALLQERSVQSLGAAGALRQLLP 232

Query: 306 --------------------------RFRYPGQKVKP-----IVVAVKVRHPGVGESIRR 334
                                     R + P    +P     I VAVKV HPG+   +R 
Sbjct: 233 PGDLADQSVLERLLLPEAGLVRSGAGRSQAPAAGRQPEQDHLIPVAVKVLHPGLLSEVRM 292

Query: 335 DFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV 394
           D +++ + ++   ++P ++WL L E V++F   M+ Q+DL  EA +L RF  NFR    V
Sbjct: 293 DLLLMKMGSRALGLLPGIRWLSLPEVVEEFEALMVRQIDLRYEAQNLERFQRNFRNVTSV 352

Query: 395 SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFI 454
            FP P++P V   V+VETYE+   VS Y  +      LK  +A +G   LLKM+ VDNF+
Sbjct: 353 KFPTPLHPFVTRDVMVETYEESVPVSSY-QQAGTPVDLKRRIAQLGLSMLLKMIFVDNFV 411

Query: 455 HADMHPGNILVRVAQKKSS------------QKRLFRSKP-----HVIFLDVGMTAELSK 497
           HAD+HPGNILV+ A  + +               +  + P      ++ LD G+ AEL  
Sbjct: 412 HADLHPGNILVQGAHGRPTSWEAQLQTLDICDTLVVAAMPTPPPLRLVLLDAGIVAELRP 471

Query: 498 TDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDE--AFAFWGTPEGDL 555
            D  N    F AVA   GR  AE  LR ++   C + + F  E+    A A   T   + 
Sbjct: 472 ADLQNFRAVFTAVALGQGRRVAELILRHARASECGDVEGFKAEMATLVAQARKNTITLEK 531

Query: 556 VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           +  +  +  + + +  H+V ++ N  +++   +VLEG  R LDP  ++++  +  LL+ 
Sbjct: 532 LDVSSLLSSVFKLLMTHKVKLESNFASIVFAIMVLEGLGRSLDPKLDILEAARPFLLRG 590


>gi|146417436|ref|XP_001484687.1| hypothetical protein PGUG_02416 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 725

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 164/510 (32%), Positives = 249/510 (48%), Gaps = 99/510 (19%)

Query: 182 VILLMRALYLGVLFSPSIMMAPFADSFGPQFRE----------LWLHVVLRTLETAGPAF 231
           ++ + R + L  +F P ++ +P    FG + ++          +W   +  + E AG +F
Sbjct: 200 LVTVGRFVELSAIFLPVLLASPIC-WFGRKDKQTGGHIRSGAIIWFRYLRWSAERAGASF 258

Query: 232 IKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR-LSEIFDGFEEA 290
           IK GQWAA+R D+FP+++C +L +LHS A  HSF  TKK + ++FG     +IFD FEE 
Sbjct: 259 IKLGQWAASRTDIFPKEMCDELQDLHSNAKAHSFHKTKKIVSKSFGGMPFEDIFDEFEEK 318

Query: 291 PVASGSIAQVHRASL-------------------RFRYPGQKVKPIVV------------ 319
           P+  G+IAQV+ A L                   R    GQ +  I+V            
Sbjct: 319 PLGVGAIAQVYIAKLSSKALEAARKEGDMEINLGRLNQTGQLLDRILVTEHEDPLTSNQY 378

Query: 320 -AVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREA 378
            A+KV HP V   I RD  I+   A   ++IP ++WL L + V+QF++ M  Q+DL  EA
Sbjct: 379 VAIKVLHPQVEVKILRDLKIMRFFANAINIIPTMEWLSLPDEVEQFSILMRLQLDLRIEA 438

Query: 379 AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH-ERLKSALA 437
            +L++F  NF +  D+ FPKP        VLVE +     +S+ +   Q   + L   ++
Sbjct: 439 LNLAKFRANFHKRLDIHFPKPYINFSTRDVLVEEFVHAVPMSKLLSLDQNFGKNLSKEVS 498

Query: 438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQK------------KSSQ----------- 474
             G  A LKML++DNF+HAD+HPGN++VR  +             KSS            
Sbjct: 499 DKGLDAFLKMLILDNFVHADLHPGNMMVRFYKNELFKHEKEYKIVKSSNEQETNRITNEL 558

Query: 475 --------------KRLFRSKPH--VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
                         ++L+    H  + FLDVG+  EL+  DRVN ++ FKA++  DG  A
Sbjct: 559 LKLGNDNDAWCKKLEQLYDDGYHAEICFLDVGLITELNHRDRVNFIDLFKALSEFDGYKA 618

Query: 519 AECTLRLSKQ-QNCPNPKAFIEEVDE--------AFAFWGTPEGDLVHPAECMQQLLEKV 569
            E     S+  +   N + F  +V++         F       GDL      + Q+L  V
Sbjct: 619 GELMAERSRTPETVINKEIFALKVEKLVDRMKKRTFTLGNVSIGDL------LDQVLGMV 672

Query: 570 RRHRVNVDGNVCTVMVTTLVLEGWQRKLDP 599
           R H V ++G+  TV+V  L+LEG  R+LDP
Sbjct: 673 RTHHVRMEGDFITVIVAILLLEGIGRQLDP 702


>gi|432862612|ref|XP_004069941.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           2-like [Oryzias latipes]
          Length = 610

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 153/479 (31%), Positives = 228/479 (47%), Gaps = 82/479 (17%)

Query: 216 WLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           WL  +L   ET+GP FIK GQWA+TR D+FP + C++ S LH K   HS+A+TK+ ++RA
Sbjct: 127 WLDALLWVTETSGPTFIKLGQWASTRRDIFPPEFCERFSRLHVKVRPHSWAHTKQCLQRA 186

Query: 276 FGRRLSEIFDGFEEAPVASGSIAQVHRASLR------------------------FRYPG 311
           FG     +     + PV SG +AQV+R   R                        +  PG
Sbjct: 187 FGESWRRVLVFESKEPVGSGCVAQVYRGFARVDQVEDPAFQLLVEEMEKEDLLGAWEIPG 246

Query: 312 -----------------------------QKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
                                        +K + I VA+KV HPGV   +  D +++  A
Sbjct: 247 LGGVVGTLQKLWRGNEESLFDEQQEESSVEKERLIPVAIKVVHPGVRRQVEIDLLLMKSA 306

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           + +   +P +KWL + E VQ+F   M  Q+DL  EA ++ RF+ NFR    V FP P+ P
Sbjct: 307 SWLLQCLPGLKWLSVCEIVQEFEKLMTKQIDLRCEAKNMERFLENFRDVDHVRFPTPMRP 366

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
            V   +LVET+E+ E +S+Y+      E +K  +A +G   LLKM+ VDNF+H D+HPGN
Sbjct: 367 FVTRNILVETFEESEPISKYLASDIPKE-VKQRIARMGVDTLLKMIFVDNFVHGDLHPGN 425

Query: 463 ILV--RVAQKKSSQKRLFRSKPH------------------------VIFLDVGMTAELS 496
           ILV  R     SS       + H                        ++ LD G+ A+LS
Sbjct: 426 ILVQCRAPIAASSDGSGLSGEHHGKTTLTDLLDTVVVSVRPDPCPLQLVLLDAGIVAQLS 485

Query: 497 KTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAF--AFWGTPEGD 554
             D  N    F AV  R G   AE  L  ++   C +   F +E+ E    A   T    
Sbjct: 486 DHDLANFKAVFTAVVLRQGEEVAELILHHARASECQDVPLFKKEMAELVDHALSNTLSLG 545

Query: 555 LVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  A+ + ++   + +H+V ++ N  +++V  +VLEG  R LDP  +++   + LLLK
Sbjct: 546 KIQVADLLSRVFGLLIKHKVKLESNFASIVVAIMVLEGLGRSLDPHLDILGLAKPLLLK 604


>gi|121714293|ref|XP_001274757.1| ubiquinone biosynthesis protein, putative [Aspergillus clavatus
           NRRL 1]
 gi|119402911|gb|EAW13331.1| ubiquinone biosynthesis protein, putative [Aspergillus clavatus
           NRRL 1]
          Length = 688

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 164/527 (31%), Positives = 255/527 (48%), Gaps = 99/527 (18%)

Query: 176 YSLVECVILLMRALYLGVLFSPSIMMAPFA-------DSFGPQFRELWLH-VVLRTLETA 227
           Y + + +   +R ++L ++F P I+ AP         +  G +   +W +  ++R++E A
Sbjct: 117 YYVYDPIATGIRFVHLAIVFVPVILTAPTLWLGRRAHNGKGERTGAIWWYGFLVRSMERA 176

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDG 286
           GPAFIK GQWAA+R D+FP ++C  +S LHS AP HS   TK+TI  AF G    +IF+ 
Sbjct: 177 GPAFIKLGQWAASRTDIFPPEMCAIMSSLHSNAPAHSLRDTKRTIRNAFNGLPFEDIFEE 236

Query: 287 FEEAPVASGSIAQVHRASLR-----------------FRYPGQK------------VKPI 317
           F E P+  G+IAQV++A L+                 FR   +K            V   
Sbjct: 237 FYEEPLGVGAIAQVYKAKLKPSLAVTDDEVLTLEDKSFRGKVRKNVDVLVKSSPRRVPSS 296

Query: 318 VVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLARE 377
            VAVKV HP V  +IRRD  I++  A + + IP + WL L + V QF   M  Q+DL  E
Sbjct: 297 YVAVKVLHPRVERTIRRDLRIMSFFASLINAIPTMHWLSLPDEVHQFGEMMKLQLDLRIE 356

Query: 378 AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALA 437
           A++L  F  NF+      FP P        VLVE + QG  +S +++   G    +  +A
Sbjct: 357 ASNLVIFRENFKSRSTAWFPYPYLDYTTREVLVEEFAQGIPLSTFLE--AGGGVYQEEIA 414

Query: 438 HIGTHALLKMLLVDNFIHADMHPGNILVR----------------------VAQKKSSQK 475
           + G  A L MLL+DNF+HAD+HPGNI+VR                       A+   ++ 
Sbjct: 415 NEGLDAFLHMLLIDNFVHADLHPGNIMVRFYQPSELDLSLRKKTRALDAPTAAEADVTET 474

Query: 476 RLFRSKPH----------------------VIFLDVGMTAELSKTDRVNLVEFFKAVARR 513
            L R +PH                      +IF+D G+  +L++ +R N ++ F+AVA  
Sbjct: 475 VLARLRPHAHNPTTWNAALAQLNAEGYCPQLIFIDTGLVTQLNEVNRKNFLDLFRAVAEF 534

Query: 514 DGRTAAECTLRLSKQQN-CPNPKAFIEEV--------DEAFAFWGTPEGDLVHPAECMQQ 564
           DG  A +  +   +Q +   +P+ F   +           FA      GD+      + +
Sbjct: 535 DGYKAGQLMVERCRQPDQVIDPEVFALRMQHLVLGIKSRTFALGNIKIGDV------LSE 588

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +L  +R H V ++G+   V+++ L+LEG  R LDP  ++  +   +L
Sbjct: 589 VLSMIRSHHVRLEGDFVNVVISILLLEGIGRSLDPDLDLFKSALPIL 635


>gi|190346273|gb|EDK38318.2| hypothetical protein PGUG_02416 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 725

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 164/510 (32%), Positives = 249/510 (48%), Gaps = 99/510 (19%)

Query: 182 VILLMRALYLGVLFSPSIMMAPFADSFGPQFRE----------LWLHVVLRTLETAGPAF 231
           ++ + R + L  +F P ++ +P    FG + ++          +W   +  + E AG +F
Sbjct: 200 LVTVGRFVELSAIFLPVLLASPIC-WFGRKDKQTGGHIRSGAIIWFRYLRWSAERAGASF 258

Query: 232 IKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR-LSEIFDGFEEA 290
           IK GQWAA+R D+FP+++C +L +LHS A  HSF  TKK + ++FG     +IFD FEE 
Sbjct: 259 IKLGQWAASRTDIFPKEMCDELQDLHSNAKAHSFHKTKKIVSKSFGGMPFEDIFDEFEEK 318

Query: 291 PVASGSIAQVHRASL-------------------RFRYPGQKVKPIVV------------ 319
           P+  G+IAQV+ A L                   R    GQ +  I+V            
Sbjct: 319 PLGVGAIAQVYIAKLSSKALEAARKEGDMEINLGRSNQTGQLLDRILVTEHEDPLTSNQY 378

Query: 320 -AVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREA 378
            A+KV HP V   I RD  I+   A   ++IP ++WL L + V+QF++ M  Q+DL  EA
Sbjct: 379 VAIKVLHPQVEVKILRDLKIMRFFANAINIIPTMEWLSLPDEVEQFSILMRLQLDLRIEA 438

Query: 379 AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH-ERLKSALA 437
            +L++F  NF +  D+ FPKP        VLVE +     +S+ +   Q   + L   ++
Sbjct: 439 LNLAKFRANFHKRLDIHFPKPYINFSTRDVLVEEFVHAVPMSKLLSLDQNFGKNLSKEVS 498

Query: 438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQK------------KSSQ----------- 474
             G  A LKML++DNF+HAD+HPGN++VR  +             KSS            
Sbjct: 499 DKGLDAFLKMLILDNFVHADLHPGNMMVRFYKNELFKHEKEYKIVKSSNEQETNRITNEL 558

Query: 475 --------------KRLFRSKPH--VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
                         ++L+    H  + FLDVG+  EL+  DRVN ++ FKA++  DG  A
Sbjct: 559 LKLGNDNDAWCKKLEQLYDDGYHAEICFLDVGLITELNHRDRVNFIDLFKALSEFDGYKA 618

Query: 519 AECTLRLSKQ-QNCPNPKAFIEEVDE--------AFAFWGTPEGDLVHPAECMQQLLEKV 569
            E     S+  +   N + F  +V++         F       GDL      + Q+L  V
Sbjct: 619 GELMAERSRTPETVINKEIFALKVEKLVDRMKKRTFTLGNVSIGDL------LDQVLGMV 672

Query: 570 RRHRVNVDGNVCTVMVTTLVLEGWQRKLDP 599
           R H V ++G+  TV+V  L+LEG  R+LDP
Sbjct: 673 RTHHVRMEGDFITVIVAILLLEGIGRQLDP 702


>gi|315041445|ref|XP_003170099.1| atypical/ABC1/ABC1-C protein kinase [Arthroderma gypseum CBS
           118893]
 gi|311345133|gb|EFR04336.1| atypical/ABC1/ABC1-C protein kinase [Arthroderma gypseum CBS
           118893]
          Length = 747

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 162/514 (31%), Positives = 243/514 (47%), Gaps = 99/514 (19%)

Query: 180 ECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE---------LWLHVVLRTLETAGPA 230
           E +    R ++L  LF P I   P    FG + ++         LW  +V+ T+E AG A
Sbjct: 182 EVIATGFRFVHLVALFIPVIASVPIV-FFGRRVKDRDNHRRGALLWYALVVYTMERAGSA 240

Query: 231 FIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEE 289
           FIK GQWAA+R D+FP +LC  +S LHS AP H    TK+TI RAF G    EIF+ F+E
Sbjct: 241 FIKLGQWAASRSDIFPPELCTMMSSLHSHAPAHPLHVTKRTISRAFNGLPFDEIFEEFDE 300

Query: 290 APVASGSIAQVHRASLRFRYPG---------------------------QKVKPIVVAVK 322
            P+  G+IAQV++A LR    G                           + V    +A+K
Sbjct: 301 KPLGVGAIAQVYKAKLRPDLAGSLDRASKPANLREKMRKNVNVLVKSTPESVPSSYIAIK 360

Query: 323 VRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLS 382
           V HP V  ++RRD  I+   A +   IP ++WL L + V++F   M  Q+DL  EAA+L+
Sbjct: 361 VLHPNVDRTVRRDLRIMGFFATLIHWIPTMEWLSLPDEVEKFGEMMKLQLDLRIEAANLA 420

Query: 383 RFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTH 442
            F  NF+      FP P        VLVE + QG  ++ +++   G    +  +AH G  
Sbjct: 421 FFRENFKSRTTARFPYPYTEYTTREVLVEEFAQGIPLAAFLE--NGGGVFQHDIAHEGLD 478

Query: 443 ALLKMLLVDNFIHADMHPGNILVR---------------------------VAQKKSSQK 475
           A L MLL+DNF+H+D+HPGNI+VR                           V +   S+ 
Sbjct: 479 AFLHMLLIDNFVHSDLHPGNIMVRFYKPSQLDLSLSVQNPHGALVSESGNTVTESVLSRL 538

Query: 476 RLFRS-----------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           R  R                  +P +IF+D G+  EL+  +R + ++ F+A+A  DG  A
Sbjct: 539 RKHRKDPAAWNETLKQIDAEGYRPQLIFIDTGLVTELNAVNRRDFLDLFRAIAEFDGYKA 598

Query: 519 AECTLRLSKQQNCP-NPKAFIEEVD--------EAFAFWGTPEGDLVHPAECMQQLLEKV 569
               +  S+Q +   + + F   +           FA      GD+      +  +L  V
Sbjct: 599 GYLMIERSRQPDTVIDAEIFALRMQHLVLSIKGRTFALGNVKLGDV------LSDVLYMV 652

Query: 570 RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           R H V ++G+   V+++ L+LEG  R+LDP  ++
Sbjct: 653 RNHHVRLEGDFINVVISALLLEGIGRRLDPDLDI 686


>gi|171678052|ref|XP_001903976.1| hypothetical protein [Podospora anserina S mat+]
 gi|170937095|emb|CAP61753.1| unnamed protein product [Podospora anserina S mat+]
          Length = 700

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 171/529 (32%), Positives = 257/529 (48%), Gaps = 99/529 (18%)

Query: 168 HAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPF-------ADSFGPQFRELWLH-V 219
           H  V  +   + E +    R L L  +F P I+  P        AD    +   LW +  
Sbjct: 124 HQIVLFLDLYIWEPICTGFRFLQLVTIFVPVILAVPAIWIGNRRADRDNERTGTLWWYGF 183

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGR- 278
           +++ +E AGPAFIK GQWAA+R D+FP +LC  +S+LH+ AP HSF  TK+ +  AFG  
Sbjct: 184 LVQAMEWAGPAFIKLGQWAASRSDVFPDELCAIMSKLHADAPAHSFHATKQIVRAAFGGC 243

Query: 279 RLSEIFDGFEEAPVASGSIAQVHRASLR-----------------------------FRY 309
              EIF+ F++ P+  G+IAQV+RA L+                              + 
Sbjct: 244 EFEEIFEEFDDKPLGVGAIAQVYRAKLKPGLTVPVDVDEGDTPEDLRRHVYKNVESVLKS 303

Query: 310 PGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369
             ++V    VAVKV HPGV  ++RRD  I+   A I + IP ++WL L + V QF   M 
Sbjct: 304 SPKRVPSSYVAVKVLHPGVERTVRRDLRIMWFFATILNSIPTIEWLSLPDEVDQFGEMMK 363

Query: 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH 429
            Q+DL  EAA+LSRF  NF+     SFP P        VL+E +  G  ++ ++    G 
Sbjct: 364 LQLDLRIEAANLSRFRKNFKERTTASFPFPYAEFCTRNVLIEEFAHGIPLAEFM--ANGG 421

Query: 430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRL------------ 477
              + A+A  G  A L+MLL+DNF+HAD+HPGNI+VR  + +    RL            
Sbjct: 422 GVFQQAIASEGLDAFLRMLLLDNFVHADLHPGNIMVRFYETERPSLRLRQTHDSHEPESE 481

Query: 478 -------------FRS-----------------KPHVIFLDVGMTAELSKTDRVNLVEFF 507
                        FR+                 +P +IF+D G+  EL++T+R N ++ F
Sbjct: 482 GDVTEQVLARLRPFRNNKEQWVAELSKMDREGFRPQLIFIDTGLVTELNETNRRNFLDLF 541

Query: 508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF------WGTPEGDL----VH 557
           +AVA  DG  A          + C  P A +++  E FA        G     L    V 
Sbjct: 542 RAVAEFDGYKAGHLMC-----ERCQQPDAVLDK--EVFALKMQHLVLGVKSRTLALGNVK 594

Query: 558 PAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
             + +Q++L  VR+H V ++G+   V+++ L+LEG  R L+P  +++ +
Sbjct: 595 IGDILQEVLNMVRQHHVRLEGDFVNVVISILLLEGIGRSLNPDVDLLSS 643


>gi|395334473|gb|EJF66849.1| ABC1-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
          Length = 701

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 155/528 (29%), Positives = 252/528 (47%), Gaps = 104/528 (19%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFREL---------WLHVVLRTLETAG 228
           ++E V+   R +YL  LF P ++ AP     GP   +L         W   + R ++ AG
Sbjct: 127 ILEPVLTAQRFVYLCFLFVPVLLTAPML-LIGPPESKLGGDRWGAVWWYGFLTRQMQYAG 185

Query: 229 PAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFE 288
           P FIK  QWAA+R DLFP  LC+++  LHS+   H+ A+TK+ IE+ F R   ++F+ F+
Sbjct: 186 PTFIKLAQWAASRADLFPALLCERMGALHSRGKAHTLAHTKRVIEQVFQRPFEDVFEEFD 245

Query: 289 EAPVASGSIAQVHRASLRF------------------------RYPGQKVKPIVVAVKVR 324
           E P+ +G+IAQV+RA+L+                           P   V    VA+KV 
Sbjct: 246 ETPIGTGAIAQVYRATLKHDLIPPSHLAPKRSKRKAVLPPSLTNEPPPSVPTASVAIKVL 305

Query: 325 HPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRF 384
           HP V ++I RD  I++  A + ++IP ++W+ L E  + F   M  Q+DL  EA +L++F
Sbjct: 306 HPRVAQTINRDLRIMSFFANVITLIPGMQWISLPEEAEVFGGMMHEQLDLRIEAENLAKF 365

Query: 385 IYNFR-RWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHA 443
             NF  R   VSFP+P+       +LVE YE    +  ++    G       LA +G  A
Sbjct: 366 EKNFEGRKLPVSFPRPLQLWSTKDLLVEEYENALPLEWFL--ANGGGPFNDTLAEVGLDA 423

Query: 444 LLKMLLVDNFIHADMHPGNILVRVAQKKSSQK---------------------------- 475
            L MLL+DNF+H+D+HPGNI+++  +  +  K                            
Sbjct: 424 FLNMLLLDNFVHSDLHPGNIMIKFVEHHNRLKASPSWFPTLFEKEDVPTSKSDKPSSSDA 483

Query: 476 -----------------RLFRSK-----PHVIFLDVGMTAELSKTDRVNLVEFFKAVARR 513
                            RL ++K     P ++F+D G+   L+  +R N ++ F+AVA  
Sbjct: 484 LVNELRALTHDQDAWRARLAQAKAEGFQPEIVFVDAGLVTTLNAVNRKNFIDLFRAVAEF 543

Query: 514 DGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF----------WGTPEGDLVHPAECMQ 563
           DG  A    +     + C  P+  I+   E FA             T     +  ++ ++
Sbjct: 544 DGYRAGILMV-----ERCRTPELAIDT--ETFALRMQHIVLNVKRKTFSLGQIKISDILK 596

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           ++L+ VR+H V ++G+    +++ L+LEG  R+LDP  ++  +   +L
Sbjct: 597 EVLKAVRKHHVKMEGDFINTVISILLLEGIGRQLDPRLDLFKSALPIL 644


>gi|320036106|gb|EFW18046.1| ubiquinone biosynthesis protein [Coccidioides posadasii str.
           Silveira]
          Length = 701

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 174/567 (30%), Positives = 264/567 (46%), Gaps = 102/567 (17%)

Query: 137 TSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFS 196
           T+G+L      S E +    ++A        H ++    Y + E     MR L+L  +F 
Sbjct: 92  TTGELEMLAASSEEAQKSVPEDANAIMRGLWHVYIFLERY-VFEVAATGMRFLHLVAIFV 150

Query: 197 PSIMMAPFADSFGPQFREL---------WLHVVLRTLETAGPAFIKWGQWAATRPDLFPR 247
           P I+  P    FG + R+          W   ++  +E AGPAFIK GQWAA+R D+FP 
Sbjct: 151 PVIVTVPII-WFGRRIRDRDDERTGTLWWYEFLVSAMERAGPAFIKLGQWAASRSDIFPP 209

Query: 248 DLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAPVASGSIAQVHRASLR 306
           +LC  +S LHS AP HSF  TK+TI +AF G    +IF+ F+  P+  G+IAQV++A LR
Sbjct: 210 ELCALMSSLHSHAPAHSFHVTKRTIRKAFNGLPFEDIFEEFDMEPLGVGAIAQVYKAKLR 269

Query: 307 -----------------------------FRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
                                         +   Q+V    VAVKV HP V   +RRD  
Sbjct: 270 PDLSALNERNIADKPVKLREKVRKNVDVLVKSTPQRVPSSYVAVKVLHPRVDRIVRRDLQ 329

Query: 338 IINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP 397
           I+   A++ + IP ++WL L + VQ+F   M  Q+DL  EA++LS F  +F+      FP
Sbjct: 330 IMMFFARVINAIPTMEWLSLPDEVQKFGEMMKLQLDLRIEASNLSLFREHFKSRTTAWFP 389

Query: 398 KPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHAD 457
            P        VLVE + QG  ++ ++    G       ++  G  A L MLL+DNF+HAD
Sbjct: 390 YPYIEYTTREVLVEEFAQGIPLTTFLK--NGGGVYDREISREGLDAFLHMLLIDNFVHAD 447

Query: 458 MHPGNILVR----------------------VAQKKSSQKRLFR---------------- 479
           +HPGNI+VR                      VA   + +K L R                
Sbjct: 448 LHPGNIMVRFYKPGQLDLSIRGHQLAPSTRHVALPDAPEKVLSRLAAWEGNPEAWTRELE 507

Query: 480 ------SKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCP- 532
                  +P +IF+D G+  +L+  +R N ++ F+A+A  DG  A    +  S+Q +   
Sbjct: 508 KIDAEGYRPQIIFIDTGLVTQLNNANRRNFLDLFRAIAEFDGYKAGHLMVERSRQPDAVL 567

Query: 533 NPKAFIEEVDE--------AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVM 584
           NP+ F  ++           FA      GD+      + ++L  VR H V ++G+   V+
Sbjct: 568 NPEIFALKMQHLVLGVKGRTFALGNVKIGDV------LSEVLYLVRAHHVRLEGDFVNVV 621

Query: 585 VTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           ++ L+LEG  R LDP  ++  +   +L
Sbjct: 622 ISILLLEGIGRSLDPDLDLFKSALPIL 648


>gi|261188055|ref|XP_002620444.1| ubiquinone biosynthesis protein [Ajellomyces dermatitidis SLH14081]
 gi|239593319|gb|EEQ75900.1| ubiquinone biosynthesis protein [Ajellomyces dermatitidis SLH14081]
 gi|239609062|gb|EEQ86049.1| ubiquinone biosynthesis protein [Ajellomyces dermatitidis ER-3]
          Length = 719

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 161/524 (30%), Positives = 246/524 (46%), Gaps = 98/524 (18%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPF-------ADSFGPQFRELWLHVVL-RTLETAGP 229
           + E V   MR L+L V+F P I   P            G +   LW +  L R +E AG 
Sbjct: 151 VAEPVATAMRLLHLIVIFVPVIATVPVIWIGGRVKSRDGERSGTLWWYAFLVRGMERAGA 210

Query: 230 AFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEE 289
           AFIK GQWAA+R D+FP +LC ++S LHS AP HS   TK+ I +AF     +IF+ F+E
Sbjct: 211 AFIKLGQWAASRSDIFPPELCAEMSSLHSDAPAHSLHATKRIISKAFNMPFEDIFEEFDE 270

Query: 290 APVASGSIAQVHRASLR-----------------------------FRYPGQKVKPIVVA 320
            P+  G+IAQV++A LR                              +    +V    VA
Sbjct: 271 KPLGVGAIAQVYKAKLRPDLCVQDKLVRDDQPQNLRAKLRKNVDTLVKSSPHRVPSSYVA 330

Query: 321 VKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAH 380
           +KV HP V  ++RRD  I+   A + + IP ++W    + V+QF   M  Q+D+  EAA+
Sbjct: 331 IKVLHPRVQRTVRRDVRIMAFFAHLINAIPTMEWFSFPDEVKQFGNMMRLQLDMRIEAAN 390

Query: 381 LSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIG 440
           L  F  +F+     SFP P        VLVE + QG  +S +++   G    +  +A  G
Sbjct: 391 LQIFRNHFKSRTTTSFPYPYTEYTTREVLVEEFAQGIPLSTFLE--SGGGVYQQEIAREG 448

Query: 441 THALLKMLLVDNFIHADMHPGNILVR----------------------VAQKKSSQKRLF 478
             A L MLL+DNF+HAD+HPGNI+VR                      + Q   ++  L 
Sbjct: 449 LDAFLHMLLIDNFVHADLHPGNIMVRFYKPGQLDLSFKTYQPSTVAREITQVDETESVLD 508

Query: 479 RSKPH----------------------VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           R +PH                      +IF+D G+  +L+  +R N ++ F+AVA  DG 
Sbjct: 509 RLRPHQGDPEKWKAVLSEIDKEGYRPQLIFIDTGLVTQLNGHNRRNFLDLFRAVAEFDGY 568

Query: 517 TAAECTLRLSKQQNCP-NPKAFIEEVDE--------AFAFWGTPEGDLVHPAECMQQLLE 567
            + +  +   +Q +   +P+ F  ++           FA      GD+      + Q+L 
Sbjct: 569 KSGQLMVERCRQPDAVIDPEIFALKMQHLVLAVKGRTFALGNVKIGDV------LSQVLY 622

Query: 568 KVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            VR H V ++G+   V+++ L+LEG  R +DP  ++  +   +L
Sbjct: 623 MVRAHHVRLEGDFVNVVISILLLEGIGRSMDPELDLFKSALPIL 666


>gi|410079547|ref|XP_003957354.1| hypothetical protein KAFR_0E00650 [Kazachstania africana CBS 2517]
 gi|372463940|emb|CCF58219.1| hypothetical protein KAFR_0E00650 [Kazachstania africana CBS 2517]
          Length = 646

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 152/498 (30%), Positives = 243/498 (48%), Gaps = 74/498 (14%)

Query: 177 SLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQ 236
           +L+E +  ++R + + +LF P I+  P       Q  ++W   +   LE  GP+FIK GQ
Sbjct: 106 NLLEPIRTVLRFVQISLLFIPIILSFPVTLLPVRQSYQIWFKFIRVVLELCGPSFIKLGQ 165

Query: 237 WAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS--EIFDGFEEAPVAS 294
           W A+R D+FP DLC +LS+LHS    HSF YT+  I+  F   L   +IF+ F    +  
Sbjct: 166 WTASRTDIFPVDLCIELSKLHSNVRPHSFTYTESIIKEMFPGELELHDIFEEFNTKSIGC 225

Query: 295 GSIAQVHRASLRFRYPGQ---KVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPA 351
           G+IAQV+ A     +  Q    ++    A+KV HP V   I+RD  I++  A     IP 
Sbjct: 226 GAIAQVYVAKFNEDFVVQHNLNLQNKWYAIKVIHPHVRNQIKRDLKIMSFFANFIDKIPT 285

Query: 352 VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVE 411
           ++WL L   V+ F + M  Q+DL  E+++L RF  NF+    + FP+P+  L +  +L E
Sbjct: 286 MEWLSLPVEVENFEILMNLQLDLRIESSNLKRFNENFKHSNQIKFPEPLLDLCNKDILCE 345

Query: 412 TY-----------------EQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFI 454
            Y                 E  +  S Y D L     L   ++     A LKML++D+FI
Sbjct: 346 EYLNGIPMGKLLQIKDTLNEMNKAQSNYDDRL-----LSQRISRPFIDAFLKMLILDDFI 400

Query: 455 HADMHPGNILVRVAQKK-------SSQKRLF-------------------------RSKP 482
           HAD+HPGN++VR  +         S+++ +F                           KP
Sbjct: 401 HADLHPGNVMVRFIRTNKYGTEITSNEEEIFAIVQSLKDIRDDSTEFNERIVKMMEEYKP 460

Query: 483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ-QNCPNPKAFIEEV 541
            + F+D G+  EL+  +R+N ++ F ++A  DG  A E  +  S+  ++  N + F  +V
Sbjct: 461 QICFIDTGLVTELNFQNRLNFIDLFNSLAMFDGYRAGELMIERSRTPESAINKELFSRKV 520

Query: 542 --------DEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGW 593
                   ++ F       GDL      + Q+L  VR H V ++G+  +V++  L+LEG 
Sbjct: 521 ERLVNRVKEKTFTLGSVSIGDL------LNQMLSMVRSHHVRMEGDFVSVVIAILLLEGI 574

Query: 594 QRKLDPGYNVMDTLQTLL 611
            R+LDP  ++ ++   LL
Sbjct: 575 GRQLDPDLDLFESSLPLL 592


>gi|348512691|ref|XP_003443876.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           2-like [Oreochromis niloticus]
          Length = 579

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 153/482 (31%), Positives = 230/482 (47%), Gaps = 86/482 (17%)

Query: 216 WLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           WL  +L   ET+GP FIK GQWA+TR D+F R+ C + S LH K   HS+A+TK+ + RA
Sbjct: 94  WLDALLWVTETSGPTFIKLGQWASTRRDIFSREFCNRFSRLHVKVRPHSWAHTKQCLRRA 153

Query: 276 FGRRLSEIFDGFEEAPVASGSIAQVHRA-------------------------------- 303
           FG     +     + PV SG IAQV+R                                 
Sbjct: 154 FGEGWRRVLVFRSKEPVGSGCIAQVYRGWARVDQVEDPAFQSIVEELEKEDLLEAWEIPG 213

Query: 304 ------SLRFRYPG----------------QKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
                 SLR  + G                Q+ + I VA+KV HPGV   +  D +++  
Sbjct: 214 LGGMARSLRQLWRGSREEESSEEKSLLDGQQEERLIPVAIKVVHPGVRRQVEIDLLLMKA 273

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
            + +   +P +KWL + E V++F   M  Q+DL  EA ++ RF  NFR +  V FP P+ 
Sbjct: 274 GSWLLHCLPGLKWLSMCEIVEEFEKLMTKQIDLRFEARNIERFQTNFRDFDYVKFPTPLR 333

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
           P V  ++LVET+E+ E +S Y+   +  + +K  +A +G   LLKM+ +DNF+H D+HPG
Sbjct: 334 PFVTRSILVETFEESEPISNYLSS-EVPKEVKQRIAKMGVDTLLKMVFLDNFVHGDLHPG 392

Query: 462 NILVRVA----------------QKKSSQKRLF-------RSKP---HVIFLDVGMTAEL 495
           NILV+                    K++   L        R  P    ++ LD G+ A+L
Sbjct: 393 NILVQCQGPLAGSGDGTGISGEHHGKTTLTDLLDTVVVSVRPAPCPIQLVLLDAGIVAQL 452

Query: 496 SKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEE----VDEAFAFWGTP 551
           S  D  N    F AV  R G   AE  L  ++   C +   F +E    VD A +     
Sbjct: 453 SDRDLANFKAVFTAVVLRQGERVAELILNHARANECKDAALFKKEMAELVDHALSSNTLS 512

Query: 552 EGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            G  V  A+ + ++   + +H+V ++ N  +++   +VLEG  R LDP  +++D  + LL
Sbjct: 513 LGK-VQVADLLSRVFGLLIKHKVKLESNFSSIVFAIMVLEGLGRSLDPNLDILDLAKPLL 571

Query: 612 LK 613
           LK
Sbjct: 572 LK 573


>gi|327356451|gb|EGE85308.1| ubiquinone biosynthesis protein [Ajellomyces dermatitidis ATCC
           18188]
          Length = 719

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 161/524 (30%), Positives = 246/524 (46%), Gaps = 98/524 (18%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPF-------ADSFGPQFRELWLHVVL-RTLETAGP 229
           + E V   MR L+L V+F P I   P            G +   LW +  L R +E AG 
Sbjct: 151 VAEPVATAMRLLHLIVIFVPVIATVPVIWIGGRVKSRDGERSGTLWWYAFLVRGMERAGA 210

Query: 230 AFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEE 289
           AFIK GQWAA+R D+FP +LC ++S LHS AP HS   TK+ I +AF     +IF+ F+E
Sbjct: 211 AFIKLGQWAASRSDIFPPELCAEMSSLHSDAPAHSLHATKRIISKAFNMPFEDIFEEFDE 270

Query: 290 APVASGSIAQVHRASLR-----------------------------FRYPGQKVKPIVVA 320
            P+  G+IAQV++A LR                              +    +V    VA
Sbjct: 271 KPLGVGAIAQVYKAKLRPDLRVQDKLVRDDQPQNLRAKLRKNVDTLVKSSPHRVPSSYVA 330

Query: 321 VKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAH 380
           +KV HP V  ++RRD  I+   A + + IP ++W    + V+QF   M  Q+D+  EAA+
Sbjct: 331 IKVLHPRVQRTVRRDVRIMAFFAHLINAIPTMEWFSFPDEVKQFGNMMRLQLDMRIEAAN 390

Query: 381 LSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIG 440
           L  F  +F+     SFP P        VLVE + QG  +S +++   G    +  +A  G
Sbjct: 391 LQIFRNHFKSRTTTSFPYPYTEYTTREVLVEEFAQGIPLSTFLE--SGGGVYQQEIAREG 448

Query: 441 THALLKMLLVDNFIHADMHPGNILVR----------------------VAQKKSSQKRLF 478
             A L MLL+DNF+HAD+HPGNI+VR                      + Q   ++  L 
Sbjct: 449 LDAFLHMLLIDNFVHADLHPGNIMVRFYKPGQLDLSFKTYQPSTVAREITQVDETESVLD 508

Query: 479 RSKPH----------------------VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           R +PH                      +IF+D G+  +L+  +R N ++ F+AVA  DG 
Sbjct: 509 RLRPHQGDPEKWKAVLSEIDKEGYRPQLIFIDTGLVTQLNGHNRRNFLDLFRAVAEFDGY 568

Query: 517 TAAECTLRLSKQQNCP-NPKAFIEEVDE--------AFAFWGTPEGDLVHPAECMQQLLE 567
            + +  +   +Q +   +P+ F  ++           FA      GD+      + Q+L 
Sbjct: 569 KSGQLMVERCRQPDAVIDPEIFALKMQHLVLAVKGRTFALGNVKIGDV------LSQVLY 622

Query: 568 KVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            VR H V ++G+   V+++ L+LEG  R +DP  ++  +   +L
Sbjct: 623 MVRAHHVRLEGDFVNVVISILLLEGIGRSMDPELDLFKSALPIL 666


>gi|392866703|gb|EAS30124.2| ubiquinone biosynthesis protein [Coccidioides immitis RS]
          Length = 701

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 173/567 (30%), Positives = 264/567 (46%), Gaps = 102/567 (17%)

Query: 137 TSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFS 196
           T+G+L      S E +    ++A        H ++    Y + E     MR L+L  +F 
Sbjct: 92  TTGELEMLAASSEEAQKSVPEDANAIMRGLWHVYIFLERY-VFEVAATGMRFLHLVAIFV 150

Query: 197 PSIMMAPFADSFGPQFREL---------WLHVVLRTLETAGPAFIKWGQWAATRPDLFPR 247
           P I+  P    FG + R+          W   ++  +E AGPAFIK GQWAA+R D+FP 
Sbjct: 151 PVIVTVPII-WFGRRIRDRDDERTGTLWWYEFLVSAMERAGPAFIKLGQWAASRSDIFPP 209

Query: 248 DLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAPVASGSIAQVHRASLR 306
           +LC  +S LHS AP HSF  TK+TI +AF G    +IF+ F+  P+  G+IAQV++A LR
Sbjct: 210 ELCALMSSLHSHAPAHSFHVTKRTIRKAFNGLPFEDIFEEFDMEPLGVGAIAQVYKAKLR 269

Query: 307 -----------------------------FRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
                                         +   Q+V    VAVKV HP V   +RRD  
Sbjct: 270 PDLSALNERNIADKPVKLREKVRKNVDVLVKSTPQRVPSSYVAVKVLHPRVDRIVRRDLQ 329

Query: 338 IINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP 397
           I+   A++ + IP ++WL L + VQ+F   M  Q+DL  EA++LS F  +F+      FP
Sbjct: 330 IMMFFARVINAIPTMEWLSLPDEVQKFGEMMKLQLDLRIEASNLSLFREHFKSRTTAWFP 389

Query: 398 KPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHAD 457
            P        VLVE + QG  ++ ++    G       ++  G  A L MLL+DNF+HAD
Sbjct: 390 YPYVEYTTREVLVEEFAQGIPLTTFLK--NGGGVYDREISREGLDAFLHMLLIDNFVHAD 447

Query: 458 MHPGNILVRV----------------------AQKKSSQKRLFR---------------- 479
           +HPGNI+VR                       A+  + +K L R                
Sbjct: 448 LHPGNIMVRFYKPGQLDLSIRGHQLAPSTRHDARPDAPEKVLSRLATWEGNPEAWTRELE 507

Query: 480 ------SKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCP- 532
                  +P +IF+D G+  +L+  +R N ++ F+A+A  DG  A    +  S+Q +   
Sbjct: 508 KIDAEGYRPQIIFIDTGLVTQLNSANRRNFLDLFRAIAEFDGYKAGHLMVERSRQPDAVL 567

Query: 533 NPKAFIEEVDE--------AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVM 584
           NP+ F  ++           FA      GD+      + ++L  VR H V ++G+   V+
Sbjct: 568 NPEIFALKMQHLVLGVKGRTFALGNVKIGDV------LSEVLYLVRAHHVRLEGDFVNVV 621

Query: 585 VTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           ++ L+LEG  R LDP  ++  +   +L
Sbjct: 622 ISILLLEGIGRSLDPDLDLFKSALPIL 648


>gi|58259509|ref|XP_567167.1| mitochondrion protein [Cryptococcus neoformans var. neoformans JEC21]
 gi|134106775|ref|XP_777929.1| hypothetical protein CNBA3980 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50260629|gb|EAL23282.1| hypothetical protein CNBA3980 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|57223304|gb|AAW41348.1| mitochondrion protein, putative [Cryptococcus neoformans var.
            neoformans JEC21]
          Length = 1149

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 154/500 (30%), Positives = 244/500 (48%), Gaps = 108/500 (21%)

Query: 170  FVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGP 229
            F+  +   ++E +    R L+L  LF P I+++P   S+G  +   W   +++ +E AGP
Sbjct: 644  FIRIIEIYILEPIGTFFRFLHLACLFVPVILLSPMLLSWGAIW---WYGFLVKQMERAGP 700

Query: 230  AFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEE 289
            +FIK GQWAA+R DLFP +LC+K+S+LHS    HS  YTKK +E AFG    +IF+ F+E
Sbjct: 701  SFIKLGQWAASRADLFPAELCEKMSKLHSNGRPHSLGYTKKVMEAAFGMGFDDIFEEFDE 760

Query: 290  APVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVI 349
             P+  G+IAQV   +              VA+KV HP V + IRRD  ++++ AK  +  
Sbjct: 761  EPIGCGAIAQVESDTAS------------VAIKVIHPRVRKIIRRDIAVMSIFAKFVNAF 808

Query: 350  PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF-RRWKDVSFPKPVYPLVHPAV 408
            P ++W  L E VQ F   M SQ+DL  EA++L +F++NF +R + V+FP P+        
Sbjct: 809  PGMQWFSLPEEVQVFGEMMNSQLDLRVEASNLDKFLHNFGKRGRRVTFPTPI-------- 860

Query: 409  LVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVR-- 466
                 + G+          G E L+  +  I     L+MLL+DN+ H D+HPGNI+VR  
Sbjct: 861  -----KLGD----------GKEELEEEMKDI-----LEMLLIDNWTHGDLHPGNIMVRFY 900

Query: 467  -------------------------------------VAQKKSSQKRLFR--------SK 481
                                                  A  +  +K L +         +
Sbjct: 901  KPTTTDYLSPLLHAFGKNPTPSTDASVASHDNLVHTLAAVSRDREKWLNKLDELHQDGYE 960

Query: 482  PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEV 541
            P +IF+D G+   L   +R N ++ F+AVA  DG  A +  +     + C  P   I+E 
Sbjct: 961  PQLIFIDAGLVTSLDSKNRANFLDLFQAVAEFDGYKAGKLMI-----ERCRTPDFAIDE- 1014

Query: 542  DEAFAF----------WGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLE 591
             E FA             T     +  ++ +  +L+ VR+H V ++G+    +++ L+LE
Sbjct: 1015 -ETFALKMQHIVLSVKSKTFSLAKIKISDILTDVLKAVRQHHVKMEGDFVNTVISILLLE 1073

Query: 592  GWQRKLDPGYNVMDTLQTLL 611
            G  R+LDP  ++  +   +L
Sbjct: 1074 GIGRQLDPDMDLFKSALPIL 1093


>gi|392597729|gb|EIW87051.1| ABC1-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
          Length = 708

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 172/619 (27%), Positives = 283/619 (45%), Gaps = 129/619 (20%)

Query: 94  AWKRLFYYSSFRDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEY 153
           AW+RL++ +       P +  +   +S      PL +P I  F+S  L      S     
Sbjct: 61  AWRRLWWVA-------PVVGGVVLCYSPG---QPLHLPSI--FSSPTLIPCNECSPR--- 105

Query: 154 FPSQNAFYTRAQDGHAFVTSVLYSLV-----ECVILLMRALYLGVLFSPSIMMAPF---- 204
           FP +  F     + H  +   ++ L+     E ++   R +YL  LF P I+  P     
Sbjct: 106 FPEEE-FIGSPHEPHRSIAFRIFDLLRDHVWEPILTARRFIYLFYLFVPVIISTPMLLVG 164

Query: 205 -------ADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELH 257
                   D +G  +   W ++++  +E AGP FIK  QWAA+R DLFP  LC+K+  L 
Sbjct: 165 KAERRLSGDRWGAVW---WYNLLVSRMEAAGPTFIKLAQWAASRADLFPFLLCEKMGALQ 221

Query: 258 SKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLR----------- 306
           S A +HSF +TK+ IER F R   E+F+ F+E+P+ +G+IAQV++ +L+           
Sbjct: 222 SHAKKHSFEHTKRIIERVFQRPFHEVFEEFDESPIGTGAIAQVYKGTLKQDLIPISYLGP 281

Query: 307 ---FRYPGQKVKPIV------------VAVKVRHPGVGESIRRDFVIINLAAKISSVIPA 351
               + PG  + P++            VA+K+ HP + ++I RD  I++  A I ++IP 
Sbjct: 282 KRQAKLPGSVIAPVIMQDPPPSVPTASVAIKILHPRIQKTIARDLAIMSFFANIITLIPG 341

Query: 352 VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFR-RWKDVSFPKPVYPLVHPAVLV 410
           V+W+ L E V  F   M  Q+DL  EA +L  F  NF  R   V+FP+P+       +LV
Sbjct: 342 VQWISLPEEVYVFGDMMRQQLDLRHEAENLVIFEKNFAPRNVPVTFPRPLKEFSSREILV 401

Query: 411 ETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQK 470
           E YE    +  ++    G       +A +G  A L MLL+DNF+H+D+H GNI+++  + 
Sbjct: 402 EEYENALPLELFLR--NGGGPYDEQVATLGLDAFLNMLLLDNFVHSDLHAGNIMIKFTKP 459

Query: 471 KSS-------QKRLFRSK-----------------------------------------P 482
            ++          LF+                                           P
Sbjct: 460 PTTVDFLRNMYSSLFKKSAHHLIQEPLESDTIVGRLRELRHSPPEWQAELTELSCAGYIP 519

Query: 483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVD 542
            ++F+D G+   L+ T+R N ++ F+AVA  DG    +  +     + C  P+  IE   
Sbjct: 520 EIVFIDTGLITTLNSTNRKNFLDLFRAVAEFDGYRTGQLMV-----ERCRTPELAIE--T 572

Query: 543 EAFAF----------WGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEG 592
           E FA             T     +  ++ +  +L  VR+H V ++G+    +++ L+LEG
Sbjct: 573 ETFALKMQHIVLSVKRKTFSLGQIKISDILTDVLVAVRQHHVKMEGDFINTVISILLLEG 632

Query: 593 WQRKLDPGYNVMDTLQTLL 611
             R+LDP  ++  +   +L
Sbjct: 633 IGRRLDPTLDLFKSALPIL 651


>gi|258577813|ref|XP_002543088.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237903354|gb|EEP77755.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 603

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 167/517 (32%), Positives = 243/517 (47%), Gaps = 100/517 (19%)

Query: 186 MRALYLGVLFSPSIMMAP-------FADSFGPQFRELWLHVVL-RTLETAGPAFIKWGQW 237
           +R L+L  +F P I   P         D  G +   LW +  L  ++E AGPAFIK GQW
Sbjct: 43  LRFLHLVAIFVPVIAAVPVIWFGRRIKDQDGERSGTLWWYEFLVSSMERAGPAFIKLGQW 102

Query: 238 AATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAPVASGS 296
           AA+R D+FP +LC  +S LHS AP HSF  TK+TI +AF G    +IF+ F++ P+  G+
Sbjct: 103 AASRSDIFPPELCALMSSLHSNAPAHSFRVTKRTIRKAFNGLPFEDIFEEFDKEPLGVGA 162

Query: 297 IAQVHRASLR-----------------------------FRYPGQKVKPIVVAVKVRHPG 327
           IAQV++A LR                              +   Q+V    VAVKV HP 
Sbjct: 163 IAQVYKAKLRPDLVAINERNLDGQPIKFRQKVRKNVDVLVKSTPQRVPSSYVAVKVLHPR 222

Query: 328 VGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYN 387
           V   +RRD  I+   A++   IP + WL L + VQ+F   M  Q+DL  EA +LS F   
Sbjct: 223 VDRIVRRDLQIMMFFARVIDAIPTMGWLSLPDEVQKFGEMMKLQLDLRIEATNLSIFRDR 282

Query: 388 FRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG-HERLKSALAHIGTHALLK 446
           F+      FP P        VLVE + QG  ++ ++    G +ER    ++  G  A L 
Sbjct: 283 FKSRTTAWFPYPYSEYTTREVLVEEFAQGIPLTTFLKNGGGAYER---EISREGLDAFLH 339

Query: 447 MLLVDNFIHADMHPGNILVRVAQKK----SSQKRLFRS---------------------- 480
           MLL+DNF+HAD+HPGNI+VR  +      S   R F S                      
Sbjct: 340 MLLIDNFVHADLHPGNIMVRFYKPGQLDLSIGGRHFTSHSKNATHDPPEDVLSRLAAHQT 399

Query: 481 -----------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
                            +P +IF+D G+  EL+ T+R N ++ F+A+A  DG  A    +
Sbjct: 400 NPDAWNRELAKIDAEGYRPQIIFIDTGLVTELNNTNRRNFLDLFRAIAEFDGYRAGHLMV 459

Query: 524 RLSKQQNCP-NPKAFIEEVD--------EAFAFWGTPEGDLVHPAECMQQLLEKVRRHRV 574
             S+Q +   + + F  ++           FA      GD       + Q+L  VR H V
Sbjct: 460 ERSRQPDTVIDAEIFALKMQHLVLGIKGRTFALGNVKIGD------VLSQVLYLVRAHHV 513

Query: 575 NVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            ++G+   V+++ L+LEG  R LDP  ++  +   +L
Sbjct: 514 RLEGDFVNVVISILLLEGIGRSLDPDLDLFKSALPIL 550


>gi|298714505|emb|CBJ27527.1| Predicted unusual protein kinase [Ectocarpus siliculosus]
          Length = 472

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/445 (31%), Positives = 228/445 (51%), Gaps = 37/445 (8%)

Query: 185 LMRALYLGVLFSPSIM----------MAPFADSFGPQFRELWLHVVLRTLETAGPAFIKW 234
           L+RAL +  L+SP ++          +            ++W   VL  +  +GP FIK 
Sbjct: 41  LLRALEILFLWSPVVVSGSVLTVLHRLPLLPKETSTNLLDVWWTFVLNIITKSGPTFIKA 100

Query: 235 GQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVAS 294
           GQW +TR D FP  +C +L +LH      + A+ +  +++AFG    + F   E+ P+ S
Sbjct: 101 GQWVSTRRDTFPEQVCTQLGKLHRFTRTSTRAHGEGALQQAFGDSWRQFF-ALEDEPLGS 159

Query: 295 GSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVK- 353
           G +A V++  +   + G+     VVAVKV HPG+ ++++ D  ++  AA++   IP +  
Sbjct: 160 GCVASVYKGHI---FAGENAGK-VVAVKVLHPGIKKTVQLDLELMRRAAEVLEHIPVLHL 215

Query: 354 -WLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVET 412
            WL L E V QFA  M  Q+DL +EAA+L RF  NF     + FP P+YP VH +VL+E 
Sbjct: 216 HWLSLVECVDQFASLMEMQMDLRQEAANLERFTKNFEDDPTILFPNPIYPWVHESVLMED 275

Query: 413 YEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKS 472
           + +GE VS +             LAH+G  A LKM  ++NF+H D+HPGN++V   ++  
Sbjct: 276 FLRGEPVSDFFP--------SKNLAHMGLQAFLKMAFLNNFVHGDLHPGNLMVERREENG 327

Query: 473 SQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCP 532
            ++        +IFLD G+  EL + DR N  + F A+   +G+ A    +  ++ Q C 
Sbjct: 328 EER--------LIFLDAGIVCELDEEDRRNFCDLFHAIVVGEGKRAGSLMVERARNQRCQ 379

Query: 533 NPKAFIEEVDEAFA---FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLV 589
           +P  F E V+E        G   G++    + + ++     +H V ++      ++   V
Sbjct: 380 DPDGFCEGVNEVVQRARSSGMRLGEM-QAGDLLGRIFRLCLKHEVKLESKFARTLIAIAV 438

Query: 590 LEGWQRKLDPGYNVMDTLQTLLLKA 614
           LEG  R LDP  N++     ++LKA
Sbjct: 439 LEGVGRSLDPDLNLLTASLPVVLKA 463


>gi|303320953|ref|XP_003070471.1| ABC1 family protein [Coccidioides posadasii C735 delta SOWgp]
 gi|240110167|gb|EER28326.1| ABC1 family protein [Coccidioides posadasii C735 delta SOWgp]
          Length = 701

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 173/567 (30%), Positives = 263/567 (46%), Gaps = 102/567 (17%)

Query: 137 TSGQLAWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFS 196
           T+G+L      S E +    ++A        H ++    Y + E     MR L+L  +F 
Sbjct: 92  TTGELEMLAASSEEAQKSVPEDANAIMRGLWHVYIFLERY-VFEVAATGMRFLHLVAIFV 150

Query: 197 PSIMMAPFADSFGPQFREL---------WLHVVLRTLETAGPAFIKWGQWAATRPDLFPR 247
           P I+  P    FG + R+          W   ++  +E AGPAFIK GQWAA+R D+FP 
Sbjct: 151 PVIVTVPII-WFGRRIRDRDDERTGTLWWYEFLVSAMERAGPAFIKLGQWAASRSDIFPP 209

Query: 248 DLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAPVASGSIAQVHRASLR 306
           +LC  +S LHS AP HSF  TK+TI +AF G    +IF+ F+  P+  G+IAQV++A LR
Sbjct: 210 ELCALMSSLHSHAPAHSFHVTKRTIRKAFNGLPFEDIFEEFDMEPLGVGAIAQVYKAKLR 269

Query: 307 -----------------------------FRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
                                         +   Q+V    VAVKV HP V   +RRD  
Sbjct: 270 PDLSALNERNIADKPVKLREKVRKNVDVLVKSTPQRVPSSYVAVKVLHPRVDRIVRRDLQ 329

Query: 338 IINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP 397
           I+   A++ + IP ++WL L + VQ+F   M  Q+DL  EA++LS F  +F+      FP
Sbjct: 330 IMMFFARVINAIPTMEWLSLPDEVQKFGEMMKLQLDLRIEASNLSLFREHFKSRTTAWFP 389

Query: 398 KPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHAD 457
            P        VLVE + QG  ++ ++    G       ++  G  A L MLL+DNF+HAD
Sbjct: 390 YPYIEYTTREVLVEEFAQGIPLTTFLK--NGGGVYDREISREGLDAFLHMLLIDNFVHAD 447

Query: 458 MHPGNILVRV----------------------AQKKSSQKRLFR---------------- 479
           +HPGNI+VR                       A   + +K L R                
Sbjct: 448 LHPGNIMVRFYKPGQLDLSIRGHQLAPSTRHDALPDAPEKVLSRLAAWEGNPEAWTRELE 507

Query: 480 ------SKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCP- 532
                  +P +IF+D G+  +L+  +R N ++ F+A+A  DG  A    +  S+Q +   
Sbjct: 508 KIDAEGYRPQIIFIDTGLVTQLNNANRRNFLDLFRAIAEFDGYKAGHLMVERSRQPDAVL 567

Query: 533 NPKAFIEEVDE--------AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVM 584
           NP+ F  ++           FA      GD+      + ++L  VR H V ++G+   V+
Sbjct: 568 NPEIFALKMQHLVLGVKGRTFALGNVKIGDV------LSEVLYLVRAHHVRLEGDFVNVV 621

Query: 585 VTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           ++ L+LEG  R LDP  ++  +   +L
Sbjct: 622 ISILLLEGIGRSLDPDLDLFKSALPIL 648


>gi|50554587|ref|XP_504702.1| YALI0E32813p [Yarrowia lipolytica]
 gi|49650571|emb|CAG80306.1| YALI0E32813p [Yarrowia lipolytica CLIB122]
          Length = 661

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 151/483 (31%), Positives = 234/483 (48%), Gaps = 73/483 (15%)

Query: 187 RALYLGVLFSPSIMMAPFADSFGPQFRE---------LWLHVVLRTLETAGPAFIKWGQW 237
           R  YL +LF+P ++  P     GP+ +           W   + + +E AG +FIK GQW
Sbjct: 123 RFFYLSILFAPVLLTLPVI-LIGPRDKSKDNERYTAIWWYGFLTKMMERAGASFIKLGQW 181

Query: 238 AATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSI 297
           AA+R D+FP  LC ++S+LHS    HS   TKKT+E AFG    EIFD F + P+  G+I
Sbjct: 182 AASRTDIFPPQLCAEMSDLHSNNKAHSLRVTKKTLEGAFGMPFEEIFDEFVDKPLGVGAI 241

Query: 298 AQVHRASLRFR-------YPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIP 350
           AQV++  L  +         G++     VA+KV HP V + + RD  I+   A I + +P
Sbjct: 242 AQVYKGKLSQKALNSTKQKKGERSPSGWVAIKVLHPRVSQIVERDLSIMRFFANIINAVP 301

Query: 351 AVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLV 410
            ++WL L   V+QFA  M  Q+DL  E  +L  F  NF+   D+ FP          VLV
Sbjct: 302 TMEWLSLPGEVEQFAGMMRLQMDLQIEGKNLEVFNKNFQDKADIHFPHAFLEFTTRDVLV 361

Query: 411 ETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRV--- 467
           E Y     V  +++  +        +A+ G  A L+MLL+DNFIHAD+HPGNI VR+   
Sbjct: 362 EEYIDAIPVHLFLERAKDGGGFDKEIANKGLDAFLQMLLIDNFIHADLHPGNIFVRLYKP 421

Query: 468 ---------------------AQKKSSQKRLFRSKP-----------------HVIFLDV 489
                                 QK +   +  +  P                  +  +D 
Sbjct: 422 ESMMHHLGFGDHNNANEDYIEMQKVNDHLKSLKHDPAAWDKEIERLKADGYHAQLCMIDA 481

Query: 490 GMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ-QNCPNPKAFIEEVDE----- 543
           G+  EL++ +R N ++ FKA+A  DG  A +  ++ S+  +   +P+ +  +V +     
Sbjct: 482 GLVTELNELNRRNFIDLFKALAEFDGYKAGDLMVQRSRTPETVIDPETYALKVGKLVAQM 541

Query: 544 ---AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPG 600
               F       GDL      + Q+L  VR+H V ++ +  TV+++ L+LEG  R+L+P 
Sbjct: 542 KSRTFKLGNFKIGDL------LTQVLAMVRQHHVRMEPDFITVILSILLLEGIGRQLNPD 595

Query: 601 YNV 603
            ++
Sbjct: 596 LDL 598


>gi|302667915|ref|XP_003025536.1| hypothetical protein TRV_00298 [Trichophyton verrucosum HKI 0517]
 gi|291189650|gb|EFE44925.1| hypothetical protein TRV_00298 [Trichophyton verrucosum HKI 0517]
          Length = 746

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 162/516 (31%), Positives = 246/516 (47%), Gaps = 99/516 (19%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE---------LWLHVVLRTLETAG 228
           + E +    R ++L VLF P I   P     G + ++         LW  +V+ T+E AG
Sbjct: 179 IFEVIATGFRLVHLVVLFIPVIASVPIV-FLGRRVKDRDNHRRGALLWYALVVYTMERAG 237

Query: 229 PAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGF 287
            AFIK GQWAA+R D+FP +LC  +S LHS AP H    TK+TI RAF G    EIF+ F
Sbjct: 238 SAFIKLGQWAASRSDIFPPELCAMMSSLHSHAPAHPLHITKRTISRAFNGLPFDEIFEEF 297

Query: 288 EEAPVASGSIAQVHRASLRFRYPG------------QKVKPIV---------------VA 320
           +E P+  G+IAQV++A LR    G            +K++  V               +A
Sbjct: 298 DEKPLGVGAIAQVYKAKLRPDLAGSLDRASKPTNLREKIRRNVNVLVKSTPESVPSSHIA 357

Query: 321 VKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAH 380
           +KV HP V  ++RRD  I+   A +   IP ++WL L + V++F   M  Q+DL  EAA+
Sbjct: 358 IKVLHPNVDRTVRRDLRIMGFFATLIHWIPTMEWLSLPDEVEKFGEMMKLQLDLRIEAAN 417

Query: 381 LSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIG 440
           L+ F  NF+      FP P        VLVE + QG  ++ +++   G    +  +A  G
Sbjct: 418 LAFFRENFKSRTTARFPYPYTEYTTREVLVEEFAQGIPLAAFLE--NGGGVFQHDIAQEG 475

Query: 441 THALLKMLLVDNFIHADMHPGNILVR--------------------VAQKKSSQKRLFRS 480
             A L MLL+DNF+H+D+HPGNI+VR                    V++  +S      S
Sbjct: 476 LDAFLHMLLIDNFVHSDLHPGNIMVRFYKPSQLDLSLSVQSPHGALVSESGNSATESVLS 535

Query: 481 ------------------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
                                   +P +IF+D G+  EL+  +R + ++ F+A+A  DG 
Sbjct: 536 RLRKHRKDPKAWNETLKQIDAEGYRPQLIFIDTGLVTELNAVNRRDFLDLFRAIADFDGY 595

Query: 517 TAAECTLRLSKQQNCP-NPKAFIEEVD--------EAFAFWGTPEGDLVHPAECMQQLLE 567
            A    +  S+Q +   + + F   +           FA      GD+      +  +L 
Sbjct: 596 KAGYLMIERSRQPDTVIDAEIFALRMQHLVLSIKGRTFALGNVKLGDV------LSDVLY 649

Query: 568 KVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
            VR H V ++G+   V+++ L+LEG  RKLDP  ++
Sbjct: 650 MVRNHHVRLEGDFINVVISALLLEGIGRKLDPDLDI 685


>gi|323454629|gb|EGB10499.1| hypothetical protein AURANDRAFT_23536 [Aureococcus anophagefferens]
          Length = 486

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 159/445 (35%), Positives = 227/445 (51%), Gaps = 34/445 (7%)

Query: 184 LLMRALYLGVLFSPSIMMAPFADSFGPQFRE-LWLHVVLRTLETAGPAFIKWGQWAATRP 242
           L+ RA +L V+F+P       A    P FR  +W  ++   L  +G  F+KW QW+ATR 
Sbjct: 17  LVARAWWLSVVFAPVYGTCGLA-WLVPAFRRRVWYRLLTTCLGASGACFVKWAQWSATRS 75

Query: 243 DLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHR 302
           DLFP  LC +L  L + AP H +++T+  +E A G R+ + F+ FE  P+ASGSIAQVHR
Sbjct: 76  DLFPDALCAELGGLQADAPRHGWSHTRCLVEAAVGCRVEDYFEAFERRPLASGSIAQVHR 135

Query: 303 ASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQ 362
           AS R          + VAVKVRHP V   +R D  ++ L AK    +P ++ LRL ++V 
Sbjct: 136 ASRR---------GVDVAVKVRHPRVAFQMRVDSRLMVLGAKCVEALPGLRGLRLSDTVH 186

Query: 363 QFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECV--- 419
           QF+  +  Q  L REA  L  F  NFR W DV+FP+P+  L  P V+VE++ +G  V   
Sbjct: 187 QFSASLAQQSRLDREADALRAFERNFRGWHDVNFPRPL--LATPGVIVESFARGTLVNGL 244

Query: 420 ---SRYVDELQGHERLKSA-LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQK 475
              ++   +L   ER   A L + G    LKMLL D  +HAD+HPGN+L+     +    
Sbjct: 245 ARDAKVRGDLTPRERRNGAHLVNRGEDIYLKMLLEDKLMHADLHPGNLLL---DDRGGAL 301

Query: 476 RLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCP--- 532
           R       +  +D GM A LS  +    V   +A+   D   AA C  R     +     
Sbjct: 302 R-------INVVDAGMVAVLSDDECEAFVGLIEALGAADAAAAARCVRRFDPANDASMSD 354

Query: 533 -NPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLE 591
              +AF  +V   FA      G  V   E ++ +L  +R HRV +     T+++  L L+
Sbjct: 355 DAKRAFDADVAALFATSCRGYGTGVDFGEVVRGVLTLIRAHRVRISAVYATLIINALCLD 414

Query: 592 GWQRKLDPGYNVMDTLQTLLLKADW 616
           G    L PGY+V+D  + LL    W
Sbjct: 415 GMAGDLLPGYSVLDGARPLLSTHRW 439


>gi|300121190|emb|CBK21571.2| Ubiquinone biosynthesis protein [Blastocystis hominis]
          Length = 575

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 150/450 (33%), Positives = 233/450 (51%), Gaps = 50/450 (11%)

Query: 181 CVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAAT 240
           C  L++RA++   +F+P  M + F   F P+ R  W H ++ +L+  G  F+K GQWAAT
Sbjct: 109 CFQLVLRAVFHLAIFAPVAMTSWFL--FFPKLRLPWYHFLMISLQVCGATFVKLGQWAAT 166

Query: 241 RPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQV 300
           RPD+ P D+C++LS L+S      F   KK IER  G++L ++FD  +  P+ SG IAQV
Sbjct: 167 RPDILPLDMCRELSTLYSTTRCIEFPKMKKIIERELGQKLEDVFDEIDLTPLGSGCIAQV 226

Query: 301 HRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDES 360
           +RA L       K     V +KV+ P +      D  +++L +     IP +++++L ES
Sbjct: 227 YRARL-------KNSNDWVVLKVKRPHIDAYFESDLQLLSLLSSCLGTIPCMQYMKLQES 279

Query: 361 VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS 420
           +  F   M  Q+D   EA +L  F  NF+      FP P   L  P +LVE+YE G  + 
Sbjct: 280 IAIFTKMMYQQLDFRIEAVNLIHFRENFKDDDQFVFPDPYLNLTTPHLLVESYEAGTPLP 339

Query: 421 RYVDELQGHERLKSA-LAHIGTHALLKMLLVDNFIHADMHPGNILV------RVAQKKSS 473
                L  H   K+A +A++G    L MLLVDNF+HAD+HPGNILV      R+  KKS 
Sbjct: 340 V----LMEHSSSKNAEIAYLGFMGFLHMLLVDNFLHADLHPGNILVRESVPCRIPLKKSI 395

Query: 474 QKRLFR---SKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQN 530
             R FR   S   ++FLD G+  EL ++ + N V+ F A+A+ +G  A    +  + Q +
Sbjct: 396 CHRSFRFRESHSQLVFLDTGLVNELEESQKRNFVDIFIALAQGNGYEAGRLLVERAPQPS 455

Query: 531 CP--NPKAFIEEVDEAFAFWGTPEGDLVHP--------------AECMQQLLEKVRRHRV 574
            P  +P+ F+ ++           GDLV+               A  + +++     H V
Sbjct: 456 PPVIDPEGFMRDI-----------GDLVNENMEDGVFNLANLEIANALTRMMSSSLAHHV 504

Query: 575 NVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
            +D     + ++ ++LEG  R+LD   N++
Sbjct: 505 TLDCRFVNLFMSVVILEGVGRQLDKNLNII 534


>gi|365758027|gb|EHM99892.1| YPL109C-like protein [Saccharomyces cerevisiae x Saccharomyces
           kudriavzevii VIN7]
          Length = 608

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 152/495 (30%), Positives = 243/495 (49%), Gaps = 76/495 (15%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE------------LWLHVVLRTLE 225
           +VE +  ++R L +  +F P +++ P +  FG   +             +W  ++ + LE
Sbjct: 112 IVEPICTVLRFLEISAIFLPVLLLYPIS-WFGHNLKVTGTNITETRGSLVWCQLLRKALE 170

Query: 226 TAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSEIF 284
            AGP+FIK GQWA +R D+F   LC +L +LHS    HSF++T K + ++    ++ + F
Sbjct: 171 LAGPSFIKLGQWAGSRTDIFSHALCHELGKLHSNVSAHSFSFTLKRLCQSLKVDKIEDAF 230

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVV--------AVKVRHPGVGESIRRDF 336
           + F   P+  GSIAQV+   L   Y   K   I +        A+K+ HP V   IRRD 
Sbjct: 231 EEFNRTPIGVGSIAQVYVGELSQEYI-DKYDNIQIGKDGNRWCAIKILHPNVRSQIRRDL 289

Query: 337 VIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF 396
            I+   A   + IP ++WL L   V+QF++ M  Q+DL  EA +L RF  NF+    V F
Sbjct: 290 KIMKFFADTVNWIPTMEWLSLPNEVEQFSILMNIQLDLRIEALNLQRFNENFKNSIQVKF 349

Query: 397 PKPVYPLVHPAVLVETYEQGECVSRYVD---ELQGHERLKSALAHIGTHALLKMLLVDNF 453
           PKP  PL +  V+ E +  G  + +++    EL   E  K  ++     A L+ML++D+F
Sbjct: 350 PKPFLPLSNRDVMFEEHVYGLSMEKFLSTKKELNDVELCKK-VSEPFVDAFLQMLILDDF 408

Query: 454 IHADMHPGNILVRVAQKK-------SSQKRLFR--------------------------- 479
           +HAD+HPGN+++R  +         SS+   FR                           
Sbjct: 409 VHADLHPGNVIIRFVKTNKYGTNIISSELESFRITHALRRKVEEHENHDFVTELKSILTN 468

Query: 480 SKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ-QNCPNPKAFI 538
             P + F+D G+  EL++ +R+N +  F A+AR DG  A E  +  SK  +   N + F 
Sbjct: 469 YTPQICFIDTGIITELNEKNRINFIALFNALARFDGYRAGELMIERSKTPETAINKEVFA 528

Query: 539 EEVDE--------AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVL 590
            +V++         F       GDL      + Q+L  VR H V ++ +  +V+V  L+L
Sbjct: 529 FKVEKLVDKVKQRTFTLGTVSIGDL------LDQMLSMVRSHHVRMESDFVSVVVAILLL 582

Query: 591 EGWQRKLDPGYNVMD 605
           EG  R+LDP  ++ +
Sbjct: 583 EGIGRQLDPNLDLFE 597


>gi|401416808|ref|XP_003872898.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322489124|emb|CBZ24376.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 595

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 140/415 (33%), Positives = 219/415 (52%), Gaps = 38/415 (9%)

Query: 215 LWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIER 274
           ++   +L  L + GP++IK GQW ATRPD FP  +CK L +L+     H +++T+K +  
Sbjct: 121 IFYEKILDFLSSMGPSYIKLGQWMATRPDFFPDQMCKTLEKLYDSTEPHKWSHTEKLLRS 180

Query: 275 AFG----------RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324
            F           R +SEI    E+ P+ SGSIAQ+HRA LR    G       +A+KV 
Sbjct: 181 EFTDGPCKGHNAVRYISEI----EKVPIKSGSIAQIHRAKLRESIDGIPAG-TELALKVT 235

Query: 325 HPGVGESIRRDFVIINLAAKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSR 383
           HP + E +  D   + L  ++ + +IP +++  LD S+ +F+  + SQ++L  E  +L +
Sbjct: 236 HPHIREQVSADLAAMRLFVRVGNRIIPGLRYFNLDSSINEFSSLVQSQLNLLVEGDNLMQ 295

Query: 384 FIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHA 443
           F YNFR +  V FP P+  L    VL ET+E+GE +   V     +      +A +G H 
Sbjct: 296 FRYNFRGFNGVIFPTPLLSLSTEDVLFETFEEGEPLQDVV-----YSEEHKDVAELGCHM 350

Query: 444 LLKMLLVDNFIHADMHPGNILVRVAQKKS------SQKRLFRSKPHVIFLDVGMTAELSK 497
            LKML  DNF+H+D+HPGNIL+R  +           KR  R +  V+ LD G+   LSK
Sbjct: 351 FLKMLFEDNFVHSDLHPGNILLRTNKTDGLRQYYPDGKRKLRFE--VVVLDTGLVTTLSK 408

Query: 498 TDRVNLVEFFKAVARRDGRTAAECTL-----RLSKQQNCPNPKAFIEEVDEAFAFW--GT 550
            +R N +  F AVA  DG   A+  +      +   Q+  N + F +E+ E F     GT
Sbjct: 409 DERNNFISLFAAVACGDGELGADLMIDRLPHSMRNAQDTVNRERFKKEIKEVFDMVAPGT 468

Query: 551 PEGDL--VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
               L  V     + ++++ VR + + +DGN  +++++ +V EG  RKL P +N+
Sbjct: 469 AGFRLSKVQIGSVLGKVMDAVRENHIPLDGNFASLVLSVIVGEGLGRKLLPDFNI 523


>gi|350639183|gb|EHA27537.1| hypothetical protein ASPNIDRAFT_56514 [Aspergillus niger ATCC 1015]
          Length = 675

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 162/515 (31%), Positives = 240/515 (46%), Gaps = 106/515 (20%)

Query: 187 RALYLGVLFSPSIMMAPFADSFGPQFRELWLH-VVLRTLETAGPAFIKWGQWAATRPDLF 245
           R ++L ++F P +      D  G +   LW +  ++R++E AGPAFIK GQWAA+R D+F
Sbjct: 128 RFVHLVIIFLPHV-----KDREGIRTGTLWWYRFLVRSMERAGPAFIKLGQWAASRTDIF 182

Query: 246 PRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSEIFDGFEEAPVASGSIAQVHRAS 304
           P +LC  +S LHS AP HS   TK+TI +AF      +IF+ F+E P+  G+IAQV++A 
Sbjct: 183 PPELCDIMSSLHSNAPAHSLHQTKRTIRKAFNWLPFEDIFEEFQEEPLGVGAIAQVYKAK 242

Query: 305 LRFRYPG----------------------------QKVKPIVVAVKVRHPGVGESIRRDF 336
           L+    G                            Q+V    VAVKV HP V   I RD 
Sbjct: 243 LKPNLAGTDDDIDLHPHGLRDKVRKNVGALVKSSPQRVPSSYVAVKVLHPRVERVIHRDL 302

Query: 337 VIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF 396
            I++  A + + IP + WL L + V QF   M  Q+DL  EA +L  F   FR      F
Sbjct: 303 KIMSFFASLINAIPTMNWLSLPDEVHQFGEMMKLQLDLRIEATNLVMFREKFRSRTTAWF 362

Query: 397 PKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHA 456
           P P        VLVE + QG  +S +++   G    +  +A+ G  A L MLL+DNF+HA
Sbjct: 363 PYPYLDYSTREVLVEEFAQGIPLSTFLE--VGGGVYQEEIANEGLDAFLHMLLIDNFVHA 420

Query: 457 DMHPGNILVR----------------------VAQKKSSQKRLFRSKPHV---------- 484
           D+HPGNI+VR                        +   ++  L R +PH+          
Sbjct: 421 DLHPGNIMVRFYRPSELDLSLGNKSRASEAPSAEEVDVTESVLARLRPHIDNRRDWVKAL 480

Query: 485 ------------IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCP 532
                       IF+D G+  +L+  +R N ++ F+A+A  DG  A E  +     + C 
Sbjct: 481 DDLNAEGYRPQLIFIDTGLVTQLNDLNRRNFIDLFRAIAEFDGYRAGELMV-----ERCR 535

Query: 533 NPKAFIEEV--------------DEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            P A I+                   FA      GD+      +  +L  VR+H V ++G
Sbjct: 536 QPDAVIDPYYFALGMEHLVLNIKSRTFALGSVKIGDV------LSDVLSMVRKHHVRLEG 589

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +   V+++ L+LEG  R LDP  ++  +   +L K
Sbjct: 590 DFVNVVISCLLLEGIGRNLDPNLDLFKSSLPILRK 624


>gi|406603837|emb|CCH44669.1| hypothetical protein BN7_4237b [Wickerhamomyces ciferrii]
          Length = 645

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 155/511 (30%), Positives = 246/511 (48%), Gaps = 99/511 (19%)

Query: 180 ECVILLMRALYLGVLFSPSIMMAP---FADSFGPQFRE-----LWLHVVLRTLETAGPAF 231
           E ++ + R + L ++F P I+  P   F      Q  E     +W  ++  +LE AG +F
Sbjct: 131 EPLVTVGRFIELTIIFLPIILTIPVSWFGKKDPLQNNERSGSIIWYKILRFSLENAGASF 190

Query: 232 IKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR-LSEIFDGFEEA 290
           IK GQWAA+R D+FP+  C++L  LHS A +HS  YTK+ + ++FG     EIF+ F E 
Sbjct: 191 IKLGQWAASRTDIFPQQFCEELGNLHSNAKKHSIGYTKRILSQSFGGLPFDEIFEEFNEN 250

Query: 291 PVASGSIAQVHRASLRFRY--------PGQKVKPIV-------------------VAVKV 323
           PV  G+IAQV+ A+L  +         P  K K  +                   VA+KV
Sbjct: 251 PVGVGAIAQVYLATLSKKLIENIDEFQPATKRKGSLFGLSSLISNDDNIPEPNQKVAIKV 310

Query: 324 RHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSR 383
            HP     I+RD  I+N  A    +IP ++WL L + V+ F + M  Q+DL  E  +L++
Sbjct: 311 IHPNAATKIKRDLKIMNFFANAIDIIPTMEWLSLPDEVRNFDILMNLQLDLRIEGLNLNK 370

Query: 384 FIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG----HERLKSALAHI 439
           F  N++    V+FPKP     + ++LVE Y  G  +S+ + EL+     ++ +   L+  
Sbjct: 371 FQENYKDDLFVNFPKPYLKFSNRSILVEEYINGLSMSKIL-ELKNSGNLNDEMSKQLSEK 429

Query: 440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRS------------------- 480
              + L+ML+++NFIH+D+H GNI VR  +    Q  +  +                   
Sbjct: 430 VIDSFLQMLILNNFIHSDLHAGNIFVRFVKPNELQTEIVSNVNERDEISRNLKKVANNND 489

Query: 481 --------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS 526
                          P V ++D G+  EL++ +RVN +  F ++A  DG  A E  +  S
Sbjct: 490 DLTKELNKLSIDGFHPEVCYIDAGLVTELNEVNRVNFIALFNSLAEFDGYKAGELMIERS 549

Query: 527 KQQNCPNPKAFIEE----------VDE----AFAFWGTPEGDLVHPAECMQQLLEKVRRH 572
           K      P+  I+E          VD+     F       GDL      ++++L  VR H
Sbjct: 550 K-----TPETAIDEEIFALKVERLVDKIKQRTFTLGTVSIGDL------LEKMLSMVRSH 598

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
            V ++G+  +V+V  L+LEG  R+LDP  ++
Sbjct: 599 HVRMEGDFVSVVVAILLLEGIGRQLDPSLDL 629


>gi|425777748|gb|EKV15904.1| Ubiquinone biosynthesis protein, putative [Penicillium digitatum
           PHI26]
 gi|425782678|gb|EKV20575.1| Ubiquinone biosynthesis protein, putative [Penicillium digitatum
           Pd1]
          Length = 630

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 164/540 (30%), Positives = 257/540 (47%), Gaps = 99/540 (18%)

Query: 176 YSLVECVILLMRALYLGVLFSPSIMMAP-------FADSFGPQFRELWLH-VVLRTLETA 227
           Y + + +   +R ++L V+F P +   P         D  G +   LW +  +++ +E A
Sbjct: 59  YYVYDPIATGLRFVHLVVIFIPVVATVPAIWLGRKVQDRDGARSGTLWWYRFLVKAMERA 118

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDG 286
           GPAFIK GQWAA+R D+FP ++C  +S LHS AP HS   TK+ I +AF G    +IF+ 
Sbjct: 119 GPAFIKLGQWAASRTDIFPPEMCNIMSSLHSNAPAHSLHQTKRIIRKAFNGLPFEDIFEE 178

Query: 287 FEEAPVASGSIAQVHRASLR------------FRYP--GQKVKPIV-------------- 318
           F+E P+  G+IAQV++A LR               P  G+KV+  V              
Sbjct: 179 FQEEPLGVGAIAQVYKAKLRPSLAATNEEELGIEPPTLGEKVRKNVDVLVKSSPQRVPSS 238

Query: 319 -VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLARE 377
            VA+KV+HP V + I RD  I++  A + + IP + WL   + VQQF   M  Q+DL  E
Sbjct: 239 YVAIKVQHPRVEQLIHRDLRIMSFFAHMINAIPTMHWLSFPDEVQQFGEMMKLQLDLRIE 298

Query: 378 AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALA 437
           AA+L  F   F       FP P        VLVE + QG  ++ ++D   G    +  +A
Sbjct: 299 AANLVIFRQKFNSRTTAWFPYPYLEYTTREVLVEEFAQGIPLATFLD--IGGGLYQHDIA 356

Query: 438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKK------SSQKRLFRS----------- 480
           + G  A L MLL+DNF+HAD+HPGNI+VR  +          + R F +           
Sbjct: 357 NQGLDAFLHMLLIDNFVHADLHPGNIMVRFYRPSELDLSLGKRSRAFNAPTRAEVDVTEA 416

Query: 481 ---------------------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARR 513
                                      +P +IF+D G+  +L++T+R N ++ F+A+A  
Sbjct: 417 VLERLRPNLNDTDDWKAALSQLNEEGYRPQLIFIDTGLVTQLNETNRRNFLDLFRAIAEF 476

Query: 514 DGRTAAECTL-RLSKQQNCPNPKAFIEEVDE--------AFAFWGTPEGDLVHPAECMQQ 564
           DG  A +  + R    +   +P+ F  +++          FA      GD+      + +
Sbjct: 477 DGYRAGQLMVERCRTPEEVIDPEIFALKMEHLVLSIKSRTFALGTVKIGDI------LSE 530

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYTI 624
           +L  VR H V  +G+   V+++ L+LEG  R L+P  ++  +   +L +     SL  T+
Sbjct: 531 VLTMVRGHHVRFEGDFVNVVISCLLLEGIGRSLNPNLDLFKSALPILRQLGSGSSLLETV 590


>gi|50593504|ref|NP_015216.3| hypothetical protein YPL109C [Saccharomyces cerevisiae S288c]
 gi|97537891|sp|Q02981.2|YP109_YEAST RecName: Full=ABC1 family protein YPL109C, mitochondrial; Flags:
           Precursor
 gi|83853946|gb|AAB68252.2| Ypl109cp [Saccharomyces cerevisiae]
 gi|190407847|gb|EDV11112.1| ABC1 family protein [Saccharomyces cerevisiae RM11-1a]
 gi|259150049|emb|CAY86852.1| EC1118_1P2_1893p [Saccharomyces cerevisiae EC1118]
 gi|285815432|tpg|DAA11324.1| TPA: hypothetical protein YPL109C [Saccharomyces cerevisiae S288c]
          Length = 657

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 149/497 (29%), Positives = 243/497 (48%), Gaps = 76/497 (15%)

Query: 177 SLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFR------------ELWLHVVLRTL 224
           ++VE V  ++R L +  +F P +++ P +  FG + +             +W  ++ + L
Sbjct: 111 NIVEPVCTILRFLEISAIFLPLLLLYPIS-WFGHKLKITDTNITETRGSLIWCQLLRKAL 169

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSEI 283
           E AGP+FIK GQWA +R D+F   LC +L +LHS    HS ++T + + +A    ++ + 
Sbjct: 170 ELAGPSFIKLGQWAGSRTDIFSHALCHELGKLHSNVTAHSLSFTLEKLSQALKVDKIEDA 229

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVV--------AVKVRHPGVGESIRRD 335
           FD F   P+  GSIAQV+   L  +Y   K   I +        A+K+ HP V   IRRD
Sbjct: 230 FDEFNRTPIGVGSIAQVYVGELSQKYI-DKYDNIQIGKDGNRWCAIKILHPNVRSQIRRD 288

Query: 336 FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS 395
             I+   A   + IP ++WL L   V QF++ M  Q+DL  EA +L RF  NF+    V 
Sbjct: 289 LKIMKFCADAINWIPTMEWLSLPSEVDQFSILMNIQLDLRIEALNLERFNENFKNSIQVK 348

Query: 396 FPKPVYPLVHPAVLVETYEQGECVSRYVDELQ--GHERLKSALAHIGTHALLKMLLVDNF 453
           FPKP  PL +  V+ E +  G  + +++   +      L   ++     A L+ML++D+F
Sbjct: 349 FPKPFLPLSNRDVMFEEHVYGLSMEKFLSTKKQINDVELCKKVSDPFVDAFLQMLILDDF 408

Query: 454 IHADMHPGNILVRVAQK-------------------------KSSQKRLFRSK------- 481
           +HAD+HPGN+++R  +                          +  Q + F  K       
Sbjct: 409 VHADLHPGNVIIRFVKTNKYGTNIISSELESYRITHDLRKKIEEDQDQDFVGKLKSVLTN 468

Query: 482 --PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
             P + F+D G+  EL++ +R+N +  F A+AR DG  A E  +  S+      P+  I+
Sbjct: 469 YTPQICFIDTGIITELNEKNRINFIALFNALARFDGYRAGELMIERSR-----TPETAID 523

Query: 540 EVDEAFAFWGTPEGDLVHP----------AECMQQLLEKVRRHRVNVDGNVCTVMVTTLV 589
           +  E FAF      D V             + + Q+L  VR H V ++ +  +V+V  L+
Sbjct: 524 K--EVFAFKVEKLVDKVKQRTFTLGTVSIGDLLDQMLSMVRSHHVRMESDFVSVVVAILL 581

Query: 590 LEGWQRKLDPGYNVMDT 606
           LEG  R+LDP  ++ ++
Sbjct: 582 LEGIGRQLDPNLDLFES 598


>gi|145342105|ref|XP_001416134.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576358|gb|ABO94426.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 426

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 204/391 (52%), Gaps = 16/391 (4%)

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGF 287
           G AFIKW QWA+TR D+FP+DLC +L +LH  AP+HS+  T + +   FG     +F  F
Sbjct: 17  GAAFIKWAQWASTREDVFPKDLCHQLEQLHDDAPQHSYGQTLRILANEFGFDPRLVFAQF 76

Query: 288 EEAPVASGSIAQVHRASLRFRYPG-------------QKVKPIVVAVKVRHPGVGESIRR 334
              P+ASGS+AQV++A LR                   +   + VAVKVRHP V + I  
Sbjct: 77  PRKPMASGSVAQVYKARLRKEVAAVCSALAQPRKLDLNEDGTMDVAVKVRHPNVAKRIFL 136

Query: 335 DFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV 394
           DF I+   A I+  +PA+K ++L  ++ QF+  M +Q DL  EA HL +F +N +    +
Sbjct: 137 DFQILRAIAGIADALPALKGMQLKNTLGQFSHTMTAQTDLRNEADHLLKFTHNMKSEVQI 196

Query: 395 SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFI 454
             P+PV   V  AVLVET+ +G+ +   +          S L  +G HA L MLL DNFI
Sbjct: 197 RAPRPVPGFVTEAVLVETFVKGDGLGSAIKHKTSR---NSELCSLGVHAYLLMLLRDNFI 253

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           H D+HPGNIL  V   +SS          +  +D G+  EL K  R   + F   + R +
Sbjct: 254 HQDLHPGNILYSVENGQSSVDSETAGIVKLELIDFGIADELPKAVRNKFLGFLCFLLRGE 313

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRV 574
           G  AA+  L    +Q C +  A   ++    +  G      V     ++++++  R+H V
Sbjct: 314 GEKAADVALTWDAKQTCTDRVALRRDMARLVSSQGDVYTQRVDLDGLLKEIMQLFRKHGV 373

Query: 575 NVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
           ++DG   +++V+  VL G+   LDP  N+ +
Sbjct: 374 SIDGIYASLVVSLCVLVGFATSLDPEINLFE 404


>gi|410908377|ref|XP_003967667.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           2-like [Takifugu rubripes]
          Length = 652

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 150/484 (30%), Positives = 231/484 (47%), Gaps = 87/484 (17%)

Query: 216 WLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           WL  +L   ET+GP FIK GQWA+TR D+F    C + S LH K   HS+++TK+ ++RA
Sbjct: 125 WLDALLWVTETSGPTFIKLGQWASTRRDIFSPAFCDRFSRLHVKVRPHSWSHTKQCLQRA 184

Query: 276 FGRRLSEIFDGFEEAPVASGSIAQVHRASLR------------------------FRYPG 311
           FG     +F    + PV SG +AQV+R   +                        +  PG
Sbjct: 185 FGEGWRRVFVFDSKEPVGSGCVAQVYRGWAKADQIEDPAFQLLLKEMDKEDLLEAWEIPG 244

Query: 312 QKVKP------------------------------------IVVAVKVRHPGVGESIRRD 335
             V P                                    I VA+KV HPGV   +  D
Sbjct: 245 LGVTPRSLWQFWKRRKEEDVLEGQKSQKMASKEQSAEKSHLIPVAIKVIHPGVKRQVEMD 304

Query: 336 FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS 395
            +++ + + +   +P +KWL L E V +F   M  Q+DL  EA ++ RF  NFR    V 
Sbjct: 305 LLLMKMGSWLLHCLPGLKWLSLCEIVDEFEKLMTKQIDLRFEARNIERFRENFRNVGYVK 364

Query: 396 FPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIH 455
           FPKP++P V   VLVET+E+ E +S Y+      E +K  +A +G  A+LKM+ VDNF+H
Sbjct: 365 FPKPLHPFVTRTVLVETFEESEPISNYLCSEMPKE-VKQRIARMGVEAILKMVFVDNFVH 423

Query: 456 ADMHPGNILVRV--------------AQKKSSQKRLFRS-----KP-----HVIFLDVGM 491
            D+HPGNIL++               A+ K++   L+ +     +P      ++ LD G+
Sbjct: 424 GDLHPGNILIQTLGKPQDSGDSVDVSARGKTTLTDLWDTVVVSVRPDSCPLQLVLLDAGI 483

Query: 492 TAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAF--AFWG 549
            A+LS+ D  NL   F AV +  G   AE  L  ++   C +   F +E+ E    A   
Sbjct: 484 VAQLSEHDLANLKAVFIAVVQCQGERVAELLLHHARAHECQDIPQFKKEMAELVDHALRN 543

Query: 550 TPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQT 609
           T     +   + + ++   V +H+V ++ N  +++   +VLEG  R LDP  +++   + 
Sbjct: 544 TVSLGKIQVGDLLSRVFGLVIKHKVKLESNFASIVFAIMVLEGLGRSLDPNLDILHLAKP 603

Query: 610 LLLK 613
           +LLK
Sbjct: 604 ILLK 607


>gi|295671823|ref|XP_002796458.1| ABC1 family protein [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226283438|gb|EEH39004.1| ABC1 family protein [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 733

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 159/525 (30%), Positives = 246/525 (46%), Gaps = 100/525 (19%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE---------LWLHVVLRTLETAG 228
           +VE V   +R  +L V+F P  +  P A   GP+ R           W   ++R +E  G
Sbjct: 162 VVEPVATALRFFHLLVIFVPVFVTVP-AIWIGPRVRSRDGERTGTLWWYGFLVRAMERGG 220

Query: 229 PAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFE 288
            AFIK GQWAA+R D+FP +LC ++S LHS AP HS   TK+ I  AF     +IF+ F+
Sbjct: 221 AAFIKLGQWAASRSDIFPPELCAQMSSLHSNAPAHSLNATKRIISNAFNMPFEDIFEEFD 280

Query: 289 EAPVASGSIAQVHRASLR-----------------------------FRYPGQKVKPIVV 319
           E P+  G+IAQV++A LR                              +   ++V    V
Sbjct: 281 EKPLGVGAIAQVYKAKLRPDLVVHDQLDVEDKPLNIAAKFKKNVDTLVKISPRRVPSSYV 340

Query: 320 AVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAA 379
           A+KV HP V   +RRD  I++  A++ + IP+++W    + V+QF   M  Q+DL  EAA
Sbjct: 341 AIKVLHPRVQRIVRRDLKIMDFFARMINAIPSMEWFSFPDEVKQFGHMMRLQLDLRIEAA 400

Query: 380 HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHI 439
           +L  F   F+      FP P        VLVE + QG  ++ +++   G    +  +A  
Sbjct: 401 NLQLFRERFKSRTTAWFPYPYTEYTTREVLVEEFAQGIPLAVFLE--SGGGVYQQGVARE 458

Query: 440 GTHALLKMLLVDNFIHADMHPGNILVR-----------------VAQKKSSQKRLFRS-- 480
           G  A L MLL+DNF+HAD+HPGNI+VR                  + K+  Q  +  S  
Sbjct: 459 GLDAFLHMLLIDNFVHADLHPGNIMVRFYKPGQLDLSFKTHRPSTSAKEKCQVDVTESVL 518

Query: 481 -------------------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
                                    +P +IF+D G+  +L+  +R N ++ F+AVA  DG
Sbjct: 519 NRLRPYQKDPEKWNAVLSEIEKEGYRPQLIFIDTGLVTQLNSLNRRNFLDLFRAVAEFDG 578

Query: 516 RTAAECTLRLSKQQNCP-NPKAFIEEVDE--------AFAFWGTPEGDLVHPAECMQQLL 566
             + +  +   +Q     +P+ F  ++           FA      GD+      + Q+L
Sbjct: 579 YRSGQLMVERCRQPGAVIDPEIFALKMQHLVLAVKGRTFALGNVKIGDV------LSQVL 632

Query: 567 EKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             VR H V ++G+   V+V+ L+LEG  R LDP  ++   +++ L
Sbjct: 633 YMVRAHHVRLEGDFVNVVVSILLLEGIGRSLDPELDLFKRIKSAL 677


>gi|256274182|gb|EEU09090.1| YPL109C-like protein [Saccharomyces cerevisiae JAY291]
          Length = 658

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 150/504 (29%), Positives = 245/504 (48%), Gaps = 76/504 (15%)

Query: 177 SLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFR------------ELWLHVVLRTL 224
           ++VE V  ++R L +  +F P +++ P +  FG + +             +W  ++ + L
Sbjct: 111 NIVEPVCTILRFLEISAIFLPLLLLYPIS-WFGHKLKITDTNITETRGSLIWCQLLRKAL 169

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSEI 283
           E AGP+FIK GQWA +R D+F   LC +L +LHS    HS ++T + + +A    ++ + 
Sbjct: 170 ELAGPSFIKLGQWAGSRTDIFSHALCHELGKLHSNVTAHSLSFTLEKLSQALKVDKIEDA 229

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVV--------AVKVRHPGVGESIRRD 335
           FD F   P+  GSIAQV+   L  +Y   K   I +        A+K+ HP V   IRRD
Sbjct: 230 FDEFNRTPIGVGSIAQVYVGELSQKYI-DKYDNIQIGKDGNRWCAIKILHPNVRSQIRRD 288

Query: 336 FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS 395
             I+   A   + IP ++WL L   V QF++ M  Q+DL  EA +L RF  NF+    V 
Sbjct: 289 LKIMKFCADAINWIPTMEWLSLPSEVDQFSILMNIQLDLRIEALNLERFNENFKNSIQVK 348

Query: 396 FPKPVYPLVHPAVLVETYEQGECVSRYVDELQ--GHERLKSALAHIGTHALLKMLLVDNF 453
           FPKP  PL +  V+ E +  G  + +++   +      L   ++     A L+ML++D+F
Sbjct: 349 FPKPFLPLSNRDVMFEEHVYGLSMEKFLSTKKQINDVELCKKVSDPFVDAFLQMLILDDF 408

Query: 454 IHADMHPGNILVRVAQK-------------------------KSSQKRLFRSK------- 481
           +HAD+HPGN+++R  +                          +  Q + F  K       
Sbjct: 409 VHADLHPGNVIIRFVKTNKYGTNIISSELESYRITHDLRKKIEEDQDQDFVGKLKSVLTN 468

Query: 482 --PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
             P + F+D G+  EL++ +R+N +  F A+AR DG  A E  +  S+      P+  I+
Sbjct: 469 YTPQICFIDTGIITELNEKNRINFIALFNALARFDGYRAGELMIERSR-----TPETAID 523

Query: 540 EVDEAFAFWGTPEGDLVHP----------AECMQQLLEKVRRHRVNVDGNVCTVMVTTLV 589
           +  E FAF      D V             + + Q+L  VR H V ++ +  +V+V  L+
Sbjct: 524 K--EVFAFKVEKLVDKVKQRTFTLGTVSIGDLLDQMLSMVRSHHVRMESDFVSVVVAILL 581

Query: 590 LEGWQRKLDPGYNVMDTLQTLLLK 613
           LEG  R+LDP  ++ +     +L+
Sbjct: 582 LEGIGRQLDPNLDLFERFSLPILR 605


>gi|323331209|gb|EGA72627.1| YPL109C-like protein [Saccharomyces cerevisiae AWRI796]
 gi|323346186|gb|EGA80476.1| YPL109C-like protein [Saccharomyces cerevisiae Lalvin QA23]
 gi|323352008|gb|EGA84547.1| YPL109C-like protein [Saccharomyces cerevisiae VL3]
 gi|365762791|gb|EHN04324.1| YPL109C-like protein [Saccharomyces cerevisiae x Saccharomyces
           kudriavzevii VIN7]
 gi|392295900|gb|EIW07003.1| hypothetical protein CENPK1137D_1590 [Saccharomyces cerevisiae
           CEN.PK113-7D]
          Length = 610

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/496 (30%), Positives = 242/496 (48%), Gaps = 76/496 (15%)

Query: 177 SLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFR------------ELWLHVVLRTL 224
           ++VE V  ++R L +  +F P +++ P +  FG + +             +W  ++ + L
Sbjct: 111 NIVEPVCTILRFLEISAIFLPLLLLYPIS-WFGHKLKITDTNITETRGSLIWCQLLRKAL 169

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSEI 283
           E AGP+FIK GQWA +R D+F   LC +L +LHS    HS ++T + + +A    ++ + 
Sbjct: 170 ELAGPSFIKLGQWAGSRTDIFSHALCHELGKLHSNVTAHSLSFTLEKLSQALKVDKIEDA 229

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVV--------AVKVRHPGVGESIRRD 335
           FD F   P+  GSIAQV+   L  +Y   K   I +        A+K+ HP V   IRRD
Sbjct: 230 FDEFNRTPIGVGSIAQVYVGELSQKYI-DKYDNIQIGKDGNRWCAIKILHPNVRSQIRRD 288

Query: 336 FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS 395
             I+   A   + IP ++WL L   V QF++ M  Q+DL  EA +L RF  NF+    V 
Sbjct: 289 LKIMKFCADAINWIPTMEWLSLPSEVDQFSILMNIQLDLRIEALNLERFNENFKNSIQVK 348

Query: 396 FPKPVYPLVHPAVLVETYEQGECVSRYVDELQ--GHERLKSALAHIGTHALLKMLLVDNF 453
           FPKP  PL +  V+ E +  G  + +++   +      L   ++     A L+ML++D+F
Sbjct: 349 FPKPFLPLSNRDVMFEEHVYGLSMEKFLSTKKQINDVELCKKVSDPFVDAFLQMLILDDF 408

Query: 454 IHADMHPGNILVRVAQK-------------------------KSSQKRLFRSK------- 481
           +HAD+HPGN+++R  +                          +  Q + F  K       
Sbjct: 409 VHADLHPGNVIIRFVKTNKYGTNIISSELESYRITHDLRKKIEEDQDQDFVGKLKSVLTN 468

Query: 482 --PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
             P + F+D G+  EL++ +R+N +  F A+AR DG  A E  +  S+      P+  I+
Sbjct: 469 YTPQICFIDTGIITELNEKNRINFIALFNALARFDGYRAGELMIERSR-----TPETAID 523

Query: 540 EVDEAFAFWGTPEGDLVHP----------AECMQQLLEKVRRHRVNVDGNVCTVMVTTLV 589
           +  E FAF      D V             + + Q+L  VR H V ++ +  +V+V  L+
Sbjct: 524 K--EVFAFKVEKLVDKVKQRTFTLGTVSIGDLLDQMLSMVRSHHVRMESDFVSVVVAILL 581

Query: 590 LEGWQRKLDPGYNVMD 605
           LEG  R+LDP  ++ +
Sbjct: 582 LEGIGRQLDPNLDLFE 597


>gi|401840609|gb|EJT43358.1| YPL109C-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 610

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 153/496 (30%), Positives = 242/496 (48%), Gaps = 78/496 (15%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE------------LWLHVVLRTLE 225
           +VE +  ++R L +  +F P +++ P +  FG   +             +W  ++ + LE
Sbjct: 112 IVEPICTVLRFLEISAIFLPVLLLYPIS-WFGHNLKVTGTNITETRGSLVWCQLLRKALE 170

Query: 226 TAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSEIF 284
            AGP+FIK GQWA +R D+F   LC +L +LHS    HS ++T K + ++    ++ + F
Sbjct: 171 LAGPSFIKLGQWAGSRTDIFSHALCHELGKLHSNVSAHSLSFTLKRLCQSLKVDKIEDAF 230

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVV--------AVKVRHPGVGESIRRDF 336
           D F   P+  GSIAQV+   L   Y   K   I +        A+K+ HP V   IRRD 
Sbjct: 231 DEFNHTPIGVGSIAQVYVGELSQEYI-DKYDNIQIGKDGNRWCAIKILHPNVRSQIRRDL 289

Query: 337 VIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF 396
            I+   A   + IP ++WL L   V+QF++ M  Q+DL  EA +L RF  NF+    V F
Sbjct: 290 KIMKFFADTINWIPTMEWLSLPNEVEQFSILMNIQLDLRIEALNLQRFNENFKNSIQVKF 349

Query: 397 PKPVYPLVHPAVLVETYEQGECVSRYVD---ELQGHERLKSALAHIGTHALLKMLLVDNF 453
           PKP  PL +  V+ E +  G  + +++    EL   E  K  ++     A L+ML++D+F
Sbjct: 350 PKPFLPLSNRDVMFEEHVYGLSMEKFLSTKKELNDVELCKK-VSDPFVDAFLQMLILDDF 408

Query: 454 IHADMHPGNILVRVAQKK-------SSQKRLFR--------------------------- 479
           +HAD+HPGN+++R  +         SS+   FR                           
Sbjct: 409 VHADLHPGNVIIRFVKTNKYGTNIISSELESFRITHALRRKVEEHENHDFVAELKSILTN 468

Query: 480 SKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
             P + F+D G+  EL++ +R+N +  F A+AR DG  A E  +  SK      P+  I+
Sbjct: 469 YTPQICFIDTGIITELNEKNRINFIALFNALARFDGYRAGELMIERSK-----TPETAID 523

Query: 540 EVDEAFAFWGTPEGDLVHP----------AECMQQLLEKVRRHRVNVDGNVCTVMVTTLV 589
           +  E FAF      D V             + + Q+L  VR H V ++ +  +V+V  L+
Sbjct: 524 K--EVFAFKVEKLVDKVKQRTFTLGTVSIGDLLDQMLSMVRSHHVRMESDFVSVVVAILL 581

Query: 590 LEGWQRKLDPGYNVMD 605
           LEG  R+LDP  ++ +
Sbjct: 582 LEGIGRQLDPNLDLFE 597


>gi|151942688|gb|EDN61034.1| conserved protein [Saccharomyces cerevisiae YJM789]
 gi|349581708|dbj|GAA26865.1| K7_Ypl109cp [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 657

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/497 (29%), Positives = 243/497 (48%), Gaps = 76/497 (15%)

Query: 177 SLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFR------------ELWLHVVLRTL 224
           ++VE V  ++R L +  +F P +++ P +  FG + +             +W  ++ + L
Sbjct: 111 NIVEPVCTILRFLEISAIFLPLLLLYPIS-WFGHKLKITDTNITETRGSLIWCQLLRKAL 169

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSEI 283
           E AGP+FIK GQWA +R D+F   LC +L +LHS    HS ++T + + +A    ++ + 
Sbjct: 170 ELAGPSFIKLGQWAGSRTDIFSHALCHELGKLHSNVTAHSLSFTLEKLSQALKVDKIEDA 229

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVV--------AVKVRHPGVGESIRRD 335
           FD F   P+  GSIAQV+   L  +Y   K   I +        A+K+ HP V   IRRD
Sbjct: 230 FDEFNRTPIGVGSIAQVYVGELSQKYI-DKYDNIQIGKDGNRWCAIKILHPNVRSQIRRD 288

Query: 336 FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS 395
             I+   A   + IP ++WL L   V QF++ M  Q+DL  EA +L RF  NF+    V 
Sbjct: 289 LKIMKFFADAINWIPTMEWLSLPSEVDQFSILMNIQLDLRIEALNLERFNENFKNSIQVK 348

Query: 396 FPKPVYPLVHPAVLVETYEQGECVSRYVDELQ--GHERLKSALAHIGTHALLKMLLVDNF 453
           FPKP  PL +  V+ E +  G  + +++   +      L   ++     A L+ML++D+F
Sbjct: 349 FPKPFLPLSNRDVMFEEHVYGLSMEKFLSTKKQINDVELCKKVSDPFVDAFLQMLILDDF 408

Query: 454 IHADMHPGNILVRVAQK-------------------------KSSQKRLFRSK------- 481
           +HAD+HPGN+++R  +                          +  Q + F  K       
Sbjct: 409 VHADLHPGNVIIRFVKTNKYGTNIISSELESYRITHDLRKKIEEDQDQDFVGKLKSVLTN 468

Query: 482 --PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
             P + F+D G+  EL++ +R+N +  F A+AR DG  A E  +  S+      P+  I+
Sbjct: 469 YTPQICFIDTGIITELNEKNRINFIALFNALARFDGYRAGELMIERSR-----TPETAID 523

Query: 540 EVDEAFAFWGTPEGDLVHP----------AECMQQLLEKVRRHRVNVDGNVCTVMVTTLV 589
           +  E FAF      D V             + + Q+L  VR H V ++ +  +V+V  L+
Sbjct: 524 K--EVFAFKVEKLVDKVKQRTFTLGTVSIGDLLDQMLSMVRSHHVRMESDFVSVVVAILL 581

Query: 590 LEGWQRKLDPGYNVMDT 606
           LEG  R+LDP  ++ ++
Sbjct: 582 LEGIGRQLDPNLDLFES 598


>gi|326474997|gb|EGD99006.1| atypical/ABC1/ABC1-C protein kinase [Trichophyton tonsurans CBS
           112818]
 gi|326483196|gb|EGE07206.1| atypical/ABC1/ABC1-C protein kinase [Trichophyton equinum CBS
           127.97]
          Length = 746

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 160/514 (31%), Positives = 242/514 (47%), Gaps = 99/514 (19%)

Query: 180 ECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE---------LWLHVVLRTLETAGPA 230
           E +    R ++L VLF P I   P     G + ++         LW  +V+ T+E AG A
Sbjct: 181 EVIATGFRFVHLVVLFIPVIASVPII-FLGRRVKDRDNHRRGALLWYALVVYTMERAGAA 239

Query: 231 FIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEE 289
           FIK GQWAA+R D+FP +LC  +S LHS AP H    TK+TI RAF G    EIF+ F+E
Sbjct: 240 FIKLGQWAASRSDIFPPELCSMMSSLHSHAPAHPLHITKRTISRAFNGLPFDEIFEEFDE 299

Query: 290 APVASGSIAQVHRASLRFRYPG---------------------------QKVKPIVVAVK 322
            P+  G+IAQV++A LR    G                           + V    +A+K
Sbjct: 300 KPLGVGAIAQVYKAKLRPDLAGSLDRASKPTNLREKMRKNVNVLVKSTPESVPSSYIAIK 359

Query: 323 VRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLS 382
           V HP V  ++RRD  I+   A +   IP ++WL L + V++F   M  Q+DL  EAA+L+
Sbjct: 360 VLHPKVDRTVRRDLRIMGFFATLIHWIPTMEWLSLPDEVEKFGEMMKLQLDLRIEAANLA 419

Query: 383 RFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTH 442
            F  NF+      FP P        VLVE + QG  ++ +++   G    +  +A  G  
Sbjct: 420 FFRENFKSRTTARFPYPYTEYTTREVLVEEFAQGIPLAAFLE--NGGGVFQHDIAQEGLD 477

Query: 443 ALLKMLLVDNFIHADMHPGNILVRVAQ-------------------------KKSSQKRL 477
           A L MLL+DNF+H+D+HPGNI+VR  +                          +S   RL
Sbjct: 478 AFLHMLLIDNFVHSDLHPGNIMVRFYKPSQLDLSLSMQSHHGALVSESGNTATESVLSRL 537

Query: 478 FRS-------------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
            +                    +P +IF+D G+  EL+  +R + ++ F+A+A  DG  A
Sbjct: 538 RKHRKDPKAWNETLKQIDAEGYRPQLIFIDTGLVTELNAVNRRDFLDLFRAIAEFDGYKA 597

Query: 519 AECTLRLSKQQNCP-NPKAFIEEVD--------EAFAFWGTPEGDLVHPAECMQQLLEKV 569
               +  S+Q +   + + F   +           FA      GD+      +  +L  V
Sbjct: 598 GYLMIERSRQPDTVIDAEIFALRMQHLVLSIKGRTFALGNVKLGDV------LSDVLYMV 651

Query: 570 RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           R H V ++G+   V+++ L+LEG  R+LDP  ++
Sbjct: 652 RNHHVRLEGDFINVVISALLLEGIGRRLDPDLDI 685


>gi|327298273|ref|XP_003233830.1| atypical/ABC1/ABC1-C protein kinase [Trichophyton rubrum CBS
           118892]
 gi|326464008|gb|EGD89461.1| atypical/ABC1/ABC1-C protein kinase [Trichophyton rubrum CBS
           118892]
          Length = 746

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 160/514 (31%), Positives = 241/514 (46%), Gaps = 99/514 (19%)

Query: 180 ECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE---------LWLHVVLRTLETAGPA 230
           E +    R ++L VLF P I   P     G + ++         LW  +V+ T+E AG A
Sbjct: 181 EVIATGFRFVHLVVLFIPVIASVPIV-FLGRRVKDRDNHRRGALLWYALVVYTMERAGSA 239

Query: 231 FIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEE 289
           FIK GQWAA+R D+FP +LC  +S LHS+AP H    TK+TI RAF G    EIF+ F+E
Sbjct: 240 FIKLGQWAASRSDIFPPELCAMMSSLHSQAPAHPLHVTKRTISRAFNGLPFDEIFEEFDE 299

Query: 290 APVASGSIAQVHRASLRFRYPG---------------------------QKVKPIVVAVK 322
            P+  G+IAQV++A LR    G                           + V    +A+K
Sbjct: 300 KPLGVGAIAQVYKAKLRPDLAGSLDRASKPTNLREKMRRNVNVLVKSTPESVPSSYIAIK 359

Query: 323 VRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLS 382
           V HP V  ++RRD  I+   A +   IP ++WL L + V++F   M  Q+DL  EAA+L+
Sbjct: 360 VLHPKVDRTVRRDLRIMGFFATLIHWIPTMEWLSLPDEVEKFGEMMKLQLDLRIEAANLA 419

Query: 383 RFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTH 442
            F  NF+      FP P        VLVE + QG  ++ +++   G    +  +A  G  
Sbjct: 420 FFRENFKSRTTARFPYPYTEYTTREVLVEEFAQGIPLAAFLE--NGGGVFQHDIAQEGLD 477

Query: 443 ALLKMLLVDNFIHADMHPGNILVRVAQKKS---------------------------SQK 475
           A L MLL+DNF+H+D+HPGNI+VR  +                              S+ 
Sbjct: 478 AFLHMLLIDNFVHSDLHPGNIMVRFYKPSQLDLSLSVQSPHGALVSESGNTATESVLSRL 537

Query: 476 RLFRS-----------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           R  R                  +P +IF+D G+  EL   +R + ++ F+A+A  DG  A
Sbjct: 538 RKHRKDPKAWNETLKQIDAEGYRPQLIFIDTGLVTELHAVNRRDFLDLFRAIAEFDGYKA 597

Query: 519 AECTLRLSKQQNCP-NPKAFIEEVD--------EAFAFWGTPEGDLVHPAECMQQLLEKV 569
               +  S+Q +   + + F   +           FA      GD+      +  +L  V
Sbjct: 598 GYLMIERSRQPDTVIDAEIFALRMQHLVLSIKGRTFALGNVKLGDV------LSDVLYMV 651

Query: 570 RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           R H V ++G+   V+++ L+LEG  R+LDP  ++
Sbjct: 652 RNHHVRLEGDFINVVISALLLEGIGRRLDPDLDI 685


>gi|157865371|ref|XP_001681393.1| conserved hypothetical protein [Leishmania major strain Friedlin]
 gi|68124689|emb|CAJ02678.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 595

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/417 (34%), Positives = 221/417 (52%), Gaps = 42/417 (10%)

Query: 215 LWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIER 274
           ++   +L  L + GP++IK GQW ATRPD FP  +CK L +L+     H +++T++ +  
Sbjct: 121 IFYEKILTFLSSMGPSYIKLGQWMATRPDFFPDKMCKTLEKLYDSTEPHKWSHTERLLRS 180

Query: 275 AFG----------RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324
            F           R +SEI    E+ P+ SGSIAQ+HRA LR    G       +A+KV 
Sbjct: 181 EFTDGPCKGHNALRYISEI----EKVPIKSGSIAQIHRAKLRESIDGIPAG-TELALKVT 235

Query: 325 HPGVGESIRRDFVIINLAAKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSR 383
           HP + E +  D   + L   + + +IP +++  LD S+++F+  + SQ+DL  E  +L +
Sbjct: 236 HPHIREQVSADLAAMRLFVWVGNRIIPGLRYFNLDSSIREFSSLVQSQLDLLVEGDNLMQ 295

Query: 384 FIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSR--YVDELQGHERLKSALAHIGT 441
           F YNFR +K V FP P+  L    VL ET+E GE +    Y +E          +A +G 
Sbjct: 296 FRYNFRSFKGVIFPTPLLSLSTEDVLFETFEVGEPLQDVAYSEE-------HKDVAELGC 348

Query: 442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ------KRLFRSKPHVIFLDVGMTAEL 495
           H  LKML  DNF+H+D+HPGNIL+R  +    +      KR  R +  V+ LD G+   L
Sbjct: 349 HMFLKMLFEDNFVHSDLHPGNILLRTNKTDGPRQYYPDGKRKLRFE--VVVLDTGLVTTL 406

Query: 496 SKTDRVNLVEFFKAVARRDGRTAAECTL-----RLSKQQNCPNPKAFIEEVDEAFAFW-- 548
           SK +R N +  F AVA  DG   A+  +      +   Q+  N + F +E+ E F     
Sbjct: 407 SKDERNNFISLFAAVACGDGELGADLMIDRLPNSMRNAQDAANRERFKKEIKEVFDMVAP 466

Query: 549 GTPEGDL--VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           GT    L  V     + ++++ VR + + +DGN  +++++ +V EG  RKL P +N+
Sbjct: 467 GTAGFRLSKVQIGSILGKVMDAVRENHIPLDGNFASLVLSVIVGEGLGRKLLPDFNI 523


>gi|146079174|ref|XP_001463713.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|398011411|ref|XP_003858901.1| hypothetical protein, conserved [Leishmania donovani]
 gi|134067800|emb|CAM66080.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|322497112|emb|CBZ32183.1| hypothetical protein, conserved [Leishmania donovani]
          Length = 595

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 139/415 (33%), Positives = 218/415 (52%), Gaps = 38/415 (9%)

Query: 215 LWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIER 274
           ++   +L  L + GP++IK GQW ATRPD FP  +CK L +L+     H +++T++ +  
Sbjct: 121 IFYEKILAFLSSMGPSYIKLGQWMATRPDFFPDQMCKTLEKLYDSTEPHKWSHTERLLRS 180

Query: 275 AFG----------RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324
            F           R +SEI    E+ P+ SGSIAQ+HRA LR    G       +A+KV 
Sbjct: 181 EFTDGPCKGHSALRYISEI----EKVPIKSGSIAQIHRAKLRESIDGIPAG-TELALKVT 235

Query: 325 HPGVGESIRRDFVIINLAAKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSR 383
           HP + E +  D   + L   + + +IP +++  LD S+ +F+  + SQ+DL  E  +L +
Sbjct: 236 HPYIREQVSADLAAMRLFVWVGNRIIPGLRYFNLDSSINEFSSLVQSQLDLLVEGDNLMQ 295

Query: 384 FIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHA 443
           F YNFR +  V FP P+  L    VL ET+E+GE +   V     +      +A +G H 
Sbjct: 296 FRYNFRSFNGVIFPTPLLSLSTEDVLFETFEEGEPLQDVV-----YSEEHKDVAELGCHM 350

Query: 444 LLKMLLVDNFIHADMHPGNILVRVAQKKS------SQKRLFRSKPHVIFLDVGMTAELSK 497
            LKML  DNF+H+D+HPGNIL+R  +           KR  R +  V+ LD G+   LSK
Sbjct: 351 FLKMLFEDNFVHSDLHPGNILLRTNKTDGLRQYYPDGKRKLRFE--VVVLDTGLVTTLSK 408

Query: 498 TDRVNLVEFFKAVARRDGRTAAECTL-----RLSKQQNCPNPKAFIEEVDEAFAFW--GT 550
            +R N +  F AVA  DG   A+  +      +   Q+  N + F +++ E F     GT
Sbjct: 409 DERNNFISLFAAVACGDGELGADLMIDRLPHSMRNSQDAANRERFKKKIKEVFDMVAPGT 468

Query: 551 PEGDL--VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
               L  V     + ++++ VR + + +DGN  +++++ +V EG  RKL P +N+
Sbjct: 469 AGFRLSKVQIGSILGKVMDAVRENHIPLDGNFASLVLSVIVGEGLGRKLLPDFNI 523


>gi|403213355|emb|CCK67857.1| hypothetical protein KNAG_0A01680 [Kazachstania naganishii CBS
           8797]
          Length = 623

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/461 (31%), Positives = 232/461 (50%), Gaps = 61/461 (13%)

Query: 198 SIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELH 257
           ++++ P A ++       W  +V    + AGP FIK GQWAA+R DLFP +LC++LS LH
Sbjct: 123 ALLIVPLAAAYPVCATAQWYKLVRFICQHAGPTFIKLGQWAASRTDLFPPELCEELSSLH 182

Query: 258 SKAPEHSFAYTKKTIERAFG-RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKP 316
           S    H FAYT+ T+   F   RL ++FD F   P+  G+IAQVH A        ++   
Sbjct: 183 SNVSPHPFAYTESTLCEVFQVERLDQVFDEFHRTPLGVGAIAQVHAAH-------RRDTD 235

Query: 317 IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAR 376
              AVK+ HP     I RD  I+   A   ++IP ++WL L + V QFA+ M  Q+DL  
Sbjct: 236 QWCAVKIIHPRAARIINRDLQIMRFWAATVNMIPTMEWLSLPDEVAQFAILMRLQLDLRI 295

Query: 377 EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPA--VLVETYEQGECVSRYVDELQ--GHERL 432
           EA +L+RF  NF +     FP+ +  + H    VL+E Y  G  + +++ E    G   L
Sbjct: 296 EAQNLTRFHENFPQSVTTKFPQAL-DMEHTTRDVLIEEYINGFPMGKFLQEKTRIGDPEL 354

Query: 433 KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSK----------- 481
              ++     A L+ML++D+F+HAD+HPGN++VR  +      ++  S+           
Sbjct: 355 TRRVSVPFVDAFLQMLILDDFVHADLHPGNVMVRFVRTNKLGTQVISSEQEHDRIVNELK 414

Query: 482 ----------------------PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
                                 P + F+DVG+  EL++T+RVN ++ F A+A  DG  A 
Sbjct: 415 DLSRTHSDALTGKLVCLLTDYTPQICFIDVGLVTELNETNRVNFIDLFNALASFDGYKAG 474

Query: 520 ECTLRLSKQ-QNCPNPKAFIEEVD--------EAFAFWGTPEGDLVHPAECMQQLLEKVR 570
           E  +  S+  +   + + F  +VD          F       GDL      ++Q+L  VR
Sbjct: 475 ELMVERSRTPETAIDKQGFASKVDRLVREVKQRTFTLGTISIGDL------LEQMLSMVR 528

Query: 571 RHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            H V ++G+  ++++  L+LEG  R+LDP  ++ ++   LL
Sbjct: 529 SHHVRMEGDFASMVIAILLLEGIGRQLDPDLDLFESSLPLL 569


>gi|154333163|ref|XP_001562842.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059847|emb|CAM37275.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 595

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/419 (33%), Positives = 224/419 (53%), Gaps = 44/419 (10%)

Query: 214 ELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIE 273
           +++   +L  L + GP++IK+GQW ATRPD FP  +CK L +L+     H +++T+K++ 
Sbjct: 120 QIFYEKMLAFLSSMGPSYIKFGQWMATRPDFFPNQMCKTLEKLYDSTEPHKWSHTEKSLR 179

Query: 274 RAFG----------RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKV 323
           R F           R +SEI    E+ P+ SGSIAQ+HRA LR    G       +A+KV
Sbjct: 180 RVFTDGPCKGHNALRYISEI----EKVPIKSGSIAQIHRAKLRESIDGIPAG-TELALKV 234

Query: 324 RHPGVGESIRRDFVIINLAAKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLS 382
            HP + E +  D   + L   + + +IP +++  LD S+ +F+  + SQ++L  EA +L 
Sbjct: 235 THPHIREQVSADLAAMRLFVWVGNRIIPGLRYFNLDASINEFSSLVRSQLNLLVEADNLM 294

Query: 383 RFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSR--YVDELQGHERLKSALAHIG 440
           +F YNFR +  V FP P+  L    VL ET+E+G  +    Y +E +G       +A +G
Sbjct: 295 QFRYNFRSFNGVIFPTPLMSLSTEDVLFETFEEGVPLHNVMYSEEYRG-------VAELG 347

Query: 441 THALLKMLLVDNFIHADMHPGNILVR------VAQKKSSQKRLFRSKPHVIFLDVGMTAE 494
            H   KML  DNF+H+D+HPGN+ +R      V Q     KR  R +  V+ LD G+   
Sbjct: 348 CHMFFKMLFEDNFVHSDLHPGNVFLRTNKTDGVRQYYPDGKRKLRFE--VVVLDTGLVTT 405

Query: 495 LSKTDRVNLVEFFKAVARRDGRTAAECTL-----RLSKQQNCPNPKAFIEEVDEAFAFWG 549
           LS+ +R N +  F AVA  DG   A+  +      +   Q+  N + F +++ + F    
Sbjct: 406 LSRDERNNFISLFAAVACGDGELGADLMIDRLPHSMRDAQDPVNRERFKQQMKQVFDLV- 464

Query: 550 TPEG-----DLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           +PE        V     + +++E VR + + +DGN  +++++ +V EG  RKL P +N+
Sbjct: 465 SPEAAGFRLSKVQIGTVLGKIMETVRENHIPLDGNFASLVLSVIVGEGLGRKLLPDFNI 523


>gi|70982233|ref|XP_746645.1| ubiquinone biosynthesis protein [Aspergillus fumigatus Af293]
 gi|66844268|gb|EAL84607.1| ubiquinone biosynthesis protein, putative [Aspergillus fumigatus
           Af293]
 gi|159122120|gb|EDP47242.1| ubiquinone biosynthesis protein, putative [Aspergillus fumigatus
           A1163]
          Length = 687

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 169/521 (32%), Positives = 249/521 (47%), Gaps = 109/521 (20%)

Query: 187 RALYLGVLFSPSIMMAP-------FADSFGPQFRELWLH-VVLRTLETAGPAFIKWGQWA 238
           R ++L ++F P I+ AP         D  G +   +W +  ++R++E AGPAFIK GQWA
Sbjct: 127 RFVHLAIVFVPVIITAPAIWFGRRLDDGKGERAGAVWWYGFLVRSMERAGPAFIKLGQWA 186

Query: 239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAPVASGSI 297
           A+R D+FP ++C  +S LHS AP HS   TKKTI +AF G    EIF+ F E P+  G+I
Sbjct: 187 ASRTDIFPPEMCNIMSSLHSHAPAHSLHQTKKTISKAFNGLPFEEIFEEFYEEPLGVGAI 246

Query: 298 AQVHRASLR-----------------FRYPGQK------------VKPIVVAVKVRHPGV 328
           AQV+RA L+                 FR   +K            V    VA+KV HP V
Sbjct: 247 AQVYRAKLKPSLAVMDDQALTLEDRSFRGKVRKNVDVLVKSSPRRVPSSYVAIKVLHPKV 306

Query: 329 GESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
              IRRD  I++  A + + IP + WL L + VQQF   M  Q+DL  EA++L  F   F
Sbjct: 307 ERVIRRDLRIMSFFASLINAIPTMHWLSLPDEVQQFGEMMKLQLDLRIEASNLVIFRQKF 366

Query: 389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML 448
           +      FP P        VLVE + QG  +  ++D   G    +  +A+ G  A L ML
Sbjct: 367 KSRTTAWFPYPYLEYTTREVLVEEFAQGIPLETFLD--VGGGVYQQEIANEGLDAFLHML 424

Query: 449 LVDNFIHADMHPGNILVR----------------------VAQKKSSQKRLFRSKPH--- 483
           L+DNF+HAD+HPGNI+VR                       A+   ++  L R +PH   
Sbjct: 425 LIDNFVHADLHPGNIMVRFYQPAELDLSLGKRSRVSDAPTAAEADVTETVLARLRPHAHN 484

Query: 484 -------------------VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR 524
                              +IF+D G+  +L++T+R N ++ F+AVA  DG  A +  + 
Sbjct: 485 REAWHAALSQLNAEGYRPQLIFIDTGLVTQLNETNRRNFLDLFRAVAEFDGFRAGQLMV- 543

Query: 525 LSKQQNCPNPKAFIEE--------------VDEAFAFWGTPEGDLVHPAECMQQLLEKVR 570
               + C  P+  I+                   FA      GD+      + ++L  VR
Sbjct: 544 ----ERCRQPEEVIDADIFALKMEHLVYNIKSRTFALGNVKIGDV------LSEVLSMVR 593

Query: 571 RHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            H V ++G+   V+++ L+LEG  R LDPG ++  +   +L
Sbjct: 594 THHVRLEGDFVNVVISILLLEGIGRSLDPGLDLFKSALPIL 634


>gi|119486714|ref|XP_001262343.1| ubiquinone biosynthesis protein, putative [Neosartorya fischeri
           NRRL 181]
 gi|119410500|gb|EAW20446.1| ubiquinone biosynthesis protein, putative [Neosartorya fischeri
           NRRL 181]
          Length = 687

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 167/516 (32%), Positives = 251/516 (48%), Gaps = 99/516 (19%)

Query: 187 RALYLGVLFSPSIMMAP-------FADSFGPQFRELWLH-VVLRTLETAGPAFIKWGQWA 238
           R ++L ++F P I+  P         D  G +   +W +  ++R++E AGPAFIK GQWA
Sbjct: 127 RFVHLAIVFIPVIITVPAIWFGRRLDDGKGERAGAVWWYGFLVRSMERAGPAFIKLGQWA 186

Query: 239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAPVASGSI 297
           A+R D+FP ++C  +S LHS AP HS   TKKTI +AF G    EIF+ F E P+  G+I
Sbjct: 187 ASRTDIFPPEMCNIMSSLHSHAPAHSLHQTKKTISKAFNGLPFEEIFEEFYEEPLGVGAI 246

Query: 298 AQVHRASLR-----------------FRYPGQK------------VKPIVVAVKVRHPGV 328
           AQV++A L+                 FR   +K            V    VA+KV HP V
Sbjct: 247 AQVYKAKLKPSLAVMDDQALTLEDGSFRGKVRKNVDVLVKSSPRRVPSSYVAIKVLHPKV 306

Query: 329 GESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
              IRRD  I++  A + + IP + WL L + VQQF   M  Q+DL  EA++L  F   F
Sbjct: 307 ERVIRRDLRIMSFFASLINAIPTMHWLSLPDEVQQFGEMMKLQLDLRIEASNLVIFRQKF 366

Query: 389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML 448
           +      FP P        VLVE + QG  +  ++D   G    +  +A+ G  A L ML
Sbjct: 367 KSRTTAWFPYPYLEYTTREVLVEEFAQGIPLETFLD--VGGGVYQQEIANEGLDAFLHML 424

Query: 449 LVDNFIHADMHPGNILVR----------------------VAQKKSSQKRLFRSKPH--- 483
           L+DNF+HAD+HPGNI+VR                       A+   ++  L R +PH   
Sbjct: 425 LIDNFVHADLHPGNIMVRFYQPAELDLSLGKRSRVADAPTAAEADVTETVLARLRPHAHN 484

Query: 484 -------------------VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR 524
                              +IF+D G+  +L++T+R N ++ F+AVA  DG  A +  + 
Sbjct: 485 REAWHAALSQLNAEGYRPQLIFIDTGLVTQLNETNRRNFLDLFRAVAEFDGFRAGQLMVE 544

Query: 525 LSKQ-QNCPNPKAFIEEVDE--------AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
             +Q +   +P  F  +++          FA      GD+      + ++L  VR H V 
Sbjct: 545 RCRQPEEVIDPDVFALKMEHLVYNIKSRTFALGNIKIGDV------LSEVLSMVRSHHVR 598

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           ++G+   V+++ L+LEG  R LDPG ++  +   +L
Sbjct: 599 LEGDFVNVVISILLLEGIGRSLDPGLDLFKSALPIL 634


>gi|255715599|ref|XP_002554081.1| KLTH0E13860p [Lachancea thermotolerans]
 gi|238935463|emb|CAR23644.1| KLTH0E13860p [Lachancea thermotolerans CBS 6340]
          Length = 738

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 155/493 (31%), Positives = 242/493 (49%), Gaps = 74/493 (15%)

Query: 177 SLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFR--------------ELWLHVVLR 222
           +++E +++  R + L ++F P  ++ P    FG +                 LW  ++ R
Sbjct: 198 AVLEPLLIASRFVQLALIFVPVFLLYPIT-FFGHRVHLDGTTTHVQTTHGARLWYAILRR 256

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLS 281
            LE AGP+FIK GQWA +R D+F   LC +L  LHS A +HS  +T++ + RA     L+
Sbjct: 257 ALEVAGPSFIKLGQWAGSRTDIFSEGLCMELGNLHSHAKKHSLKFTEREVCRALKINHLN 316

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIV------VAVKVRHPGVGESIRRD 335
           + F+ F+E P+  G+IAQV+   L   +  ++   +        A+K+ HP    +I RD
Sbjct: 317 DAFEKFDERPLGVGAIAQVYVGQLSHAFVRERELQLDPDENRWCAIKIIHPHAARNISRD 376

Query: 336 FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS 395
             I+   A    +IP ++WL L   V+QFA+ M  Q+DL  E  +L RF  NF+R   V 
Sbjct: 377 LRIMQFFADAIDMIPTMEWLSLPNEVEQFAILMRLQLDLRIECMNLKRFNDNFKRSFQVK 436

Query: 396 FPKPVYPLVHPAVLVETYEQG---ECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDN 452
           FP+    L    VL E Y  G   E   R  DEL     L+  ++H    A L+ML++D+
Sbjct: 437 FPRGFQELTTRQVLFEEYIYGFPMEEFLRAKDELNDTS-LRKKVSHPFIDAFLQMLILDD 495

Query: 453 FIHADMHPGNILVRV--AQKKSSQ---------------KRLFRSK-------------- 481
           FIHAD+HPGN+++R   A K  S+               KR  ++K              
Sbjct: 496 FIHADLHPGNVMIRFVKADKYHSKSISTEEECYEVIHRLKRKLKNKDESFLPELRQVLTD 555

Query: 482 --PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ-QNCPNPKAFI 538
             P + F+D G+  EL+  +R N +  F A+AR DG  A E  +  S+  +   + + F 
Sbjct: 556 FTPQICFIDTGLVTELNTRNRTNFIALFDALARFDGYRAGELMIERSRTPETAIDKELFA 615

Query: 539 EEVDE--------AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVL 590
            +V++         F       GDL      + Q+L  VR H V ++G+  +V+V  L+L
Sbjct: 616 LKVEKLVAKVKKRTFTLGTVSIGDL------LDQMLSMVRGHHVRMEGDFVSVVVAILLL 669

Query: 591 EGWQRKLDPGYNV 603
           EG  R+LDP  ++
Sbjct: 670 EGIGRQLDPDLDL 682


>gi|389751203|gb|EIM92276.1| ABC1-domain-containing protein [Stereum hirsutum FP-91666 SS1]
          Length = 701

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 154/528 (29%), Positives = 253/528 (47%), Gaps = 105/528 (19%)

Query: 180 ECVILLMRALYLGVLFSPSIMMAPFADSFGPQFR--------ELWLHVVLRTLETAGPAF 231
           E ++   R ++L  LF P I+ AP      P+ R          W   ++  +E AGP F
Sbjct: 126 EPILTAKRFVHLFCLFMPVILSAPMLLVGVPERRLQGDRWGAVWWYGFLVAQMEYAGPTF 185

Query: 232 IKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAP 291
           IK  QWAA+R DLFP  LC+KL ++HS+   H  ++T+K IER F +R  ++F+ F++ P
Sbjct: 186 IKLAQWAASRADLFPSLLCEKLGKMHSRGRPHPLSHTRKVIERVFAKRFEDVFEEFDDEP 245

Query: 292 VASGSIAQVHRASLRFRY---------------PGQ-----------KVKPIVVAVKVRH 325
           + +G+IAQV+RA+L+                  PG             V    VA+KV H
Sbjct: 246 IGTGAIAQVYRATLKQDLLPPSYFDPKRAPRSGPGAIAPHILPDSIPSVPTAAVAIKVLH 305

Query: 326 PGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFI 385
           P V ++I RD  I+ L A + ++IP ++W+ L E V+ F   M  Q+DL  EA +L  F 
Sbjct: 306 PRVAKTIARDLTIMKLFAHMITLIPGMEWISLPEEVEVFGRMMYEQLDLRHEANNLVMFE 365

Query: 386 YNF-RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL 444
            NF  R + ++FP+P+       +LVE Y+    +  ++    G       LA +G  A 
Sbjct: 366 TNFMTRKEPITFPRPLRTFSTQDLLVEEYQNALPLEAFLK--NGGGPYDDQLAELGLDAF 423

Query: 445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQ------------------------------ 474
           L MLL+DNF+H+D+HPGNI+V+  +  +S                               
Sbjct: 424 LNMLLLDNFVHSDLHPGNIMVKFTKPSTSALLKTLWASLLNGDKQSVTALDHATSPDSDA 483

Query: 475 --KRL---------FRSKPH----------VIFLDVGMTAELSKTDRVNLVEFFKAVARR 513
             +RL         +R++ H          ++F+D G+   L   +R N ++ F+AVA  
Sbjct: 484 IVERLSALTSSPEEWRAELHDLHTQGYFPELVFIDAGLITTLDSKNRQNFLDLFRAVAEF 543

Query: 514 DGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF----------WGTPEGDLVHPAECMQ 563
           DG    +  +     + C +P+  I+   E FA             T     +  ++ + 
Sbjct: 544 DGYRTGQLMV-----ERCRSPELAIDT--ETFALRMQHIMLSVKRKTFSLGQIKISDILT 596

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           ++L+ VR+H V ++G+    +++ L+LEG  R+LDPG ++  +   +L
Sbjct: 597 EVLKAVRQHHVKMEGDFINTVISILLLEGIGRQLDPGLDLFKSALPIL 644


>gi|50310111|ref|XP_455069.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644204|emb|CAH00156.1| KLLA0E24795p [Kluyveromyces lactis]
          Length = 602

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 157/502 (31%), Positives = 239/502 (47%), Gaps = 73/502 (14%)

Query: 169 AFVTSVLYSL----VECVILLMRALYLGVLFSPSIMMAPFA----------DSFGPQFRE 214
           +F   +LY +    +E V+ L+R L L  +F P +++ P            DS     +E
Sbjct: 91  SFFKRILYRINDVIIEPVLTLLRFLELSSIFIPLLIIYPITCLGHHKTLKVDS-NRVVKE 149

Query: 215 -----LWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
                LW  ++ + LE AGP FIK GQWA +R D+F   LC +L  LHS A  H+  +TK
Sbjct: 150 TSGSLLWFKLLRKALEFAGPTFIKLGQWAGSRTDIFSEGLCAELGRLHSNAKPHALKFTK 209

Query: 270 KTIERAFGRR--LSEIFDGFEEAPVASGSIAQVH---RASLRFRYPGQKVKPIVVAVKVR 324
           + I  +  R+    +IFD F E PV  G+IAQV+      L  +    K      AVKV 
Sbjct: 210 EAIVNSLDRKYEFDDIFDEFNEKPVGCGAIAQVYIGKLTELMMKNFDIKTDSRYFAVKVV 269

Query: 325 HPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRF 384
           HP V + I RD  I+   A +   +P ++WL L   V+QF++ M  Q+DL  E  +L +F
Sbjct: 270 HPNVPKKIDRDLKIMTFFADMIDSVPTMEWLSLPNEVEQFSILMKLQLDLRIECQNLQKF 329

Query: 385 IYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHER--LKSALAHIGTH 442
             NF     V FP     L    VL E Y  G  + +++    G +R  L   ++     
Sbjct: 330 NDNFADNPRVKFPVGAMDLSSRYVLFEEYIHGFPMEKFLSSKDGLKRVDLCRKVSDPFIE 389

Query: 443 ALLKMLLVDNFIHADMHPGNILVRVAQKK-------SSQKRLFR---------------- 479
           A LKML++D+FIHAD+HPGN+++R  +         SS+K +F+                
Sbjct: 390 AFLKMLILDDFIHADLHPGNVMIRFMKLNKQETKVVSSEKEMFQIVHKLRAMSRDNDPEF 449

Query: 480 ----------SKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQ 529
                      +P V  +D G+  EL+  +RVN +  F A+A+ DG  A E  +  S+  
Sbjct: 450 IPEMKRVFEEYEPQVCLIDAGLVTELNDRNRVNFIALFNALAKFDGYRAGELMIERSRTP 509

Query: 530 NCPNPK--------AFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVC 581
                K          + +V +     GT     V   E + ++L  VR+H V ++G+  
Sbjct: 510 ETAIDKDLFALKVEKLVNKVKKQTFTLGT-----VSIGELLDKMLGMVRQHHVRMEGDFV 564

Query: 582 TVMVTTLVLEGWQRKLDPGYNV 603
           +V+V  L+LEG  R+LDP  ++
Sbjct: 565 SVIVAILLLEGIGRQLDPEMDL 586


>gi|367009170|ref|XP_003679086.1| hypothetical protein TDEL_0A05430 [Torulaspora delbrueckii]
 gi|359746743|emb|CCE89875.1| hypothetical protein TDEL_0A05430 [Torulaspora delbrueckii]
          Length = 679

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 160/516 (31%), Positives = 245/516 (47%), Gaps = 84/516 (16%)

Query: 163 RAQDGHAFVTSVLY-----SLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE--- 214
           R ++G  F    L+     +++E +  L R L L  +F P  +  P   SF  + R    
Sbjct: 89  RCRNGFTFYAKKLFFVLKDNIIEPISTLFRFLELSAIFLPVFLAYPV--SFFGRHRAVDG 146

Query: 215 -----------LWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEH 263
                      +W  ++ + LE AGP+FIK GQWA +R D+F    C +L +LHS A  H
Sbjct: 147 DDKTLETSGSLMWYTMLRKALEWAGPSFIKLGQWAGSRTDMFSHGFCHELGKLHSNAHAH 206

Query: 264 SFAYTKKTIERAFGRR--LSEIFDGFEEAPVASGSIAQVHRASLRFRY------PGQKVK 315
           S  YT++ I ++ G +    EIF+ F E P+  G+IAQV+   L  ++         KV 
Sbjct: 207 SLEYTREKICQSLGDKYEFDEIFEEFHEKPLGVGAIAQVYMGKLSEKFIASYEDTNTKVG 266

Query: 316 PIV---VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQV 372
             +    AVKV HP     + RD  I+   A +  +IP ++WL L   V+ F++ M  Q+
Sbjct: 267 KELNRWCAVKVIHPHANRQVNRDLKIMTFFASVIDMIPTMEWLSLPSEVENFSILMRLQL 326

Query: 373 DLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQG---ECVSRYVDELQGH 429
           DL  E  +L RF  NF+    V FP  +  L    VL E Y  G   E   R  D+L+  
Sbjct: 327 DLRIECLNLGRFNKNFKDSIQVKFPTALPQLSTRDVLFEEYIHGFPMEQFLRVKDQLKDV 386

Query: 430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVA-----------------QKKS 472
           E L   +++    A L+ML++D+F+HAD+HPGN+++R                   Q   
Sbjct: 387 E-LCQEVSNPFIDAFLQMLILDDFVHADLHPGNVMIRFVKLNRYGTKITSSEDETYQIVH 445

Query: 473 SQKRLFRSK----------------PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           S K   R+K                P + F+D G+  EL+K +R+N +  F A+AR DG 
Sbjct: 446 SLKHKLRNKDPEFLDELKEVLQDYVPQICFIDAGLITELNKKNRINFIALFNALARFDGY 505

Query: 517 TAAECTLRLSKQ-QNCPNPKAFIEEVDE--------AFAFWGTPEGDLVHPAECMQQLLE 567
            A E  +  SK  +   + + F  +V++         F       GDL      + Q+L 
Sbjct: 506 QAGELMIERSKTPETAIDKEVFALKVEKLVSKVRKRTFTLGTVSIGDL------LDQMLS 559

Query: 568 KVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
            VR H V ++G+  +V+V  L+LEG  R+LDP  ++
Sbjct: 560 MVRSHHVRMEGDFVSVVVAILLLEGIGRQLDPDLDL 595


>gi|440634320|gb|ELR04239.1| hypothetical protein GMDG_06647 [Geomyces destructans 20631-21]
          Length = 681

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 170/520 (32%), Positives = 252/520 (48%), Gaps = 110/520 (21%)

Query: 187 RALYLGVLFSPSIMMAPF---ADSFGPQFRE-----LWLHVVLRTLETAGPAFIKWGQWA 238
           R L+L ++F P I   P          Q  E     LW   ++ ++E AGPAFIK GQWA
Sbjct: 125 RFLHLVIIFVPVIAAVPLIWIGRRQAGQDHERSGTLLWYRFLVNSMERAGPAFIKLGQWA 184

Query: 239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR-LSEIFDGFEEAPVASGSI 297
           A+R D+FP  +C+ +S+LHS AP HS   TK+ I RAF  R   +IF+ FEE P+  G+I
Sbjct: 185 ASRSDIFPTQMCEMMSQLHSNAPAHSLHDTKRIIRRAFDHRPFEDIFEEFEEQPLGVGAI 244

Query: 298 AQVHRASLR--FRYPG--------------------------QKVKPIVVAVKVRHPGVG 329
           AQV++A L+     PG                          Q+V    VA+KV HPGV 
Sbjct: 245 AQVYKAKLKPDLAVPGDPDLADHIEFRKTVRHNVDTLIKNTPQRVPSNYVAIKVLHPGVE 304

Query: 330 ESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFR 389
             +RRD  I+   A + + IP ++WL L + V QFA  M  Q+DL  EA +L  F  +F 
Sbjct: 305 RLVRRDLWIMGFFASVLNAIPTIEWLSLPDEVSQFASMMRLQLDLRIEATNLLLFRRHFA 364

Query: 390 RWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLL 449
                 FP P        VLVE + QG  ++ +++   G    + A+A+ G  A L+MLL
Sbjct: 365 DRTTAWFPYPHTAFTTRQVLVEEFAQGIPLADFME--NGGGVFQEAIANEGLDAFLRMLL 422

Query: 450 VDNFIHADMHPGNILVRVAQKKS-----------------------SQKRLFRS------ 480
           +DNF+HAD+HPGNI+VR  Q                           + R +R       
Sbjct: 423 IDNFVHADLHPGNIMVRFYQSSKPHLPFSGNPPDPATATDVTETVLERLRPYRKRRDKAG 482

Query: 481 -------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSK 527
                        +P +IF+D G+  EL+ T+R N ++ FKAVA  DG  A       S+
Sbjct: 483 WEDELARIDAAGFRPQLIFIDTGLVTELNATNRRNFLDLFKAVAEFDGYRAGHLMCSRSR 542

Query: 528 QQNCPNPKAFIEEVDEAFAF---------------WGTPE-GDLVHPAECMQQLLEKVRR 571
           Q     P+A +++  E FA                 G+   GD++H      ++L+ VR 
Sbjct: 543 Q-----PEAVLDQ--EVFALKMQHLVLSVKSRTLALGSMRIGDILH------EVLQMVRA 589

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           H V ++G+   V+++ L+LEG  R+L+P  +++ +   +L
Sbjct: 590 HHVRMEGDFINVVLSILLLEGSGRQLNPDIDLLSSALPIL 629


>gi|408391473|gb|EKJ70849.1| hypothetical protein FPSE_09001 [Fusarium pseudograminearum CS3096]
          Length = 690

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 168/521 (32%), Positives = 250/521 (47%), Gaps = 102/521 (19%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFREL---------WLHVVLRTLETAG 228
           ++E V    R L L V+F P I+  P A  FG +  +          W   ++  +E AG
Sbjct: 123 IIEPVCTGFRFLQLVVIFVPVIITIP-AIYFGSRRSDRDNERSGTLWWYGFLVNEMELAG 181

Query: 229 PAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR-LSEIFDGF 287
           PAFIK GQWAA+R D+FP ++C+ +S+LHS AP HS   T+ T+E AFG     EIF+ F
Sbjct: 182 PAFIKLGQWAASRTDIFPTEMCEIMSKLHSNAPAHSLHATRVTVEAAFGGLPFEEIFEEF 241

Query: 288 EEAPVASGSIAQVHRASLR------------FRYP-GQKVKPIV---------------V 319
            E P+  G+IAQV++A L+              YP  Q VK  V               V
Sbjct: 242 HEKPLGVGAIAQVYKAKLKPGLAKPEEADLHDSYPLAQNVKRNVDTVLKSSPQRIPSSYV 301

Query: 320 AVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAA 379
           A+KV HP V  ++RRD  I+   A + ++IP ++WL L + V QF   M  Q+DL  EAA
Sbjct: 302 AIKVLHPRVERTVRRDLRIMGFFASLLNLIPTIEWLSLPDEVTQFGEMMKLQLDLRIEAA 361

Query: 380 HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHI 439
           +L+ F  NF+      FP P        VL+E Y QG  ++ +++   G    +  +A  
Sbjct: 362 NLATFRKNFKDRSTAWFPYPYTEYTTRNVLIEEYAQGIPLADFME--NGGGVFQHDIADE 419

Query: 440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRS------------------- 480
           G  A L+MLL+DNF+HAD+HPGNI+VR  Q      RL ++                   
Sbjct: 420 GLDAFLRMLLLDNFVHADLHPGNIMVRFYQSAHPDLRLRKAMTKAHPDEAEDVTEQVLER 479

Query: 481 -------------------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
                                    +P +IF+D G+  EL+  +R N ++ F+AVA  DG
Sbjct: 480 LRPYRHRKDTKAWQDELTKIDAEGFRPQLIFIDTGLVTELNAVNRENFLDLFRAVAEFDG 539

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF----------WGTPEGDLVHPAECMQQL 565
             A          + C  P A +++  E FA             T     V   + +Q++
Sbjct: 540 YKAGHLMC-----ERCRQPDAVLDK--EVFALKMQHLVLSVKSRTLALGNVKIGDILQEV 592

Query: 566 LEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           L  VR H V ++G+   V+++ L+LEG  R L+P  +++ +
Sbjct: 593 LSMVRNHHVRLEGDFVNVVISILLLEGIGRSLNPDVDLLSS 633


>gi|167524950|ref|XP_001746810.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774590|gb|EDQ88217.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1706

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 151/460 (32%), Positives = 239/460 (51%), Gaps = 28/460 (6%)

Query: 184 LLMRALYLGVLFSPSIMMAPFA---DSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAAT 240
           +  RAL   +LF+P +   PFA   +  G      W    L T++ +GP FIK+GQWA++
Sbjct: 126 IFSRALRHILLFTPVLCAFPFAYLLNRVG-FIWNGWWSWFLWTIQVSGPTFIKFGQWASS 184

Query: 241 RPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQV 300
           R DLF  ++C + ++LH+    H+ A T+ T++ +FG    +I    E  PV SG +AQV
Sbjct: 185 RRDLFSVEVCNRCAQLHASVMHHTVAETEATLDESFGVGWRDIM-VLEPIPVGSGCVAQV 243

Query: 301 HRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDES 360
           +RA L+  +P  K  P  VAVKV HP V + +  D  ++   AK   +IP ++W+   + 
Sbjct: 244 YRAHLK--HPSGK-GPSDVAVKVIHPQVQKQVIDDVDLLRFVAKAIELIPMLRWVSARDG 300

Query: 361 VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS 420
           V++F+  M  Q+DL  E  ++ RF  NF+   DV  P+ +  L    VLVETYE+G+ + 
Sbjct: 301 VEEFSRSMTEQLDLRNEGYNMLRFQENFKDVSDVIVPRVIPELTSENVLVETYEEGQPMH 360

Query: 421 RYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRS 480
              D   G E+L+  LA  G     KM+  DNFIH D+HPGN+ V    +          
Sbjct: 361 VMFD---GDEKLRRRLARRGLELFFKMMFKDNFIHGDLHPGNMRVTGVDEHGQPT----G 413

Query: 481 KP-HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
           +P  ++ LD G+  E+++ DR N ++ F A+  +DGR      L  ++  +C +P+ FI 
Sbjct: 414 EPVKILLLDGGIITEMTRRDRANFIDLFGAIVHKDGRECGRLMLSRARLHDCDDPEGFIS 473

Query: 540 EVDEAF---------AFWGTPEG---DLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTT 587
            VD+            F     G   + V   E +Q++L  + ++RV ++ N   V++  
Sbjct: 474 SVDKLVRTACDITDAGFRDLNSGMRLNKVQVGELLQRVLTLMCQYRVKIESNFTNVLIGI 533

Query: 588 LVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYTIDGL 627
           +V EG  R LDP  ++M     +LLK     +L  T + L
Sbjct: 534 MVAEGVGRALDPEVDLMVLAGPILLKEKAKMALDCTTESL 573


>gi|429241121|ref|NP_596583.2| ABC1 kinase family protein [Schizosaccharomyces pombe 972h-]
 gi|395398589|sp|Q9P7M0.2|YOS3_SCHPO RecName: Full=ABC1 family protein C21C3.03, mitochondrial; Flags:
           Precursor
 gi|347834392|emb|CAB76039.2| ABC1 kinase family protein [Schizosaccharomyces pombe]
          Length = 692

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 237/505 (46%), Gaps = 69/505 (13%)

Query: 184 LLMRALYLGVLFSPSIMMAPFA--------DSFGPQFRELWLHVVLRTLETAGPAFIKWG 235
           +L+R+  L ++FSP I+  PF          S       +WL  ++  LE AG  FIK G
Sbjct: 154 ILLRSFNLFIIFSPIIITLPFIALISFLHLRSLSSLTVSIWLRFLVTQLERAGATFIKLG 213

Query: 236 QWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSEIFDGFEEAPVAS 294
           QWAA+R DLFP   CK LS+LHS    HS AYT+  I + +    + EIF  F   P+  
Sbjct: 214 QWAASRTDLFPPAFCKTLSKLHSHVTPHSLAYTQSVICKTYKVESIEEIFVNFNPIPIGV 273

Query: 295 GSIAQVHRASLR-------------------FRYPGQKVKPIV--VAVKVRHPGVGESIR 333
           G+IAQV+ A+++                   FR       P+   VA+KV HP V + I 
Sbjct: 274 GAIAQVYTATIKKAATQQDNSYFTSMLQSIGFRQKNISDAPVTQDVAIKVLHPNVEKYIS 333

Query: 334 RDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKD 393
            D  I+   AK+ +++P++KWL L + V+ F   +  Q++L  EA HL++F  NFR  + 
Sbjct: 334 LDLQILGFFAKLINLVPSMKWLSLPDEVKVFGAMLNQQLNLHYEALHLNQFRLNFRGNRY 393

Query: 394 VSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNF 453
           V FP P        +L+E Y  G  +S ++    G       LA+ G +AL +ML+VDNF
Sbjct: 394 VEFPAPYDDYTTNQILLEDYMPGIPLSAFLKHKSG--PFNKLLANTGNNALFQMLIVDNF 451

Query: 454 IHADMHPGNILVRVAQKKSSQKRLFRS--------------------------------K 481
            HAD+HPGN+LV+    K   K +F                                  +
Sbjct: 452 THADLHPGNVLVKFY--KGIPKTIFNQDNEINDSIYKILSTCSTEEWDSAMEELNILGYR 509

Query: 482 PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ-QNCPNPKAFIEE 540
           P ++FLD G+  +LS  D+ N ++ F+AV    G  A    +  S+Q +   N   F  +
Sbjct: 510 PTLVFLDAGLVTKLSTQDQKNFLDLFQAVLTFHGYEAGLLMVERSRQTERVINKDIFALK 569

Query: 541 VDEAFAFWGTPEGDL--VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLD 598
           ++            L  +     +Q+++   R H V ++ N    +++ L++EG  R+L 
Sbjct: 570 MEHLLNEIQKSTLSLKSLQIGTILQEVMTMAREHHVRIEANFANTVLSILLVEGAGRQLY 629

Query: 599 PGYNVMDTLQTLLLKADWAKSLSYT 623
           P  +++      L  A    ++S T
Sbjct: 630 PEMDLLSNATPYLRSASSKSNVSLT 654


>gi|365986967|ref|XP_003670315.1| hypothetical protein NDAI_0E02550 [Naumovozyma dairenensis CBS 421]
 gi|343769085|emb|CCD25072.1| hypothetical protein NDAI_0E02550 [Naumovozyma dairenensis CBS 421]
          Length = 699

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 154/508 (30%), Positives = 238/508 (46%), Gaps = 80/508 (15%)

Query: 169 AFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFA-------------DSFGPQFREL 215
            F+  +  SL+E +  L+R L L  +F P +++ P               D+ G     L
Sbjct: 105 VFIYQIKDSLIEPIFTLLRFLELSTIFLPVLLIYPITYLGRPIQLPDGEVDTRGSL---L 161

Query: 216 WLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTI-ER 274
           W  +V   LE AGP+FIK GQWA +R D+F + LC  LS+LHS    H F YTKK + E 
Sbjct: 162 WCKLVKIALEYAGPSFIKLGQWAGSRNDIFSKTLCDALSQLHSNVSPHPFKYTKKVLCEM 221

Query: 275 AFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIV--------------VA 320
                L E FD   E P+  G+IAQV+ A L   +  +K   I                A
Sbjct: 222 LNVGELGEAFDEINEKPLGVGAIAQVYVAKLSELFV-KKHNVITNNGNGNGNDANNRWCA 280

Query: 321 VKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAH 380
           +K+ HP V + I RD  I++  A+  + +P ++WL L + V+QF++ M  Q+DL  EA +
Sbjct: 281 IKIIHPNVRKQISRDLKIMDFFARCINSLPNMEWLSLPDEVEQFSILMNLQLDLRIEALN 340

Query: 381 LSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRY--VDELQGHERLKSALAH 438
           L RF  NF+    + F      L +  VL E Y  G  +  +  +      + L   ++ 
Sbjct: 341 LKRFNENFKNDLQIKFANVFLNLCNKDVLFEEYIYGFPMGDFLKIKTKINDDNLCRRVSD 400

Query: 439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSK----------------- 481
               A LKML++D+FIHAD+HPGN+L+R  +       +  S+                 
Sbjct: 401 PFVDAFLKMLILDDFIHADLHPGNVLIRFVKTNKYGTSILSSEVDDFKVTHSLRKKFEKQ 460

Query: 482 ----------------PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR- 524
                           P V F+D G+  EL+  +RVN ++ F A+AR +G  A E  +  
Sbjct: 461 DPEFILELKHVLENYTPQVCFIDTGLVTELNDKNRVNFIDLFNALARFNGYRAGELMIER 520

Query: 525 -------LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
                  + K+      K   ++V +     GT     V   + ++Q+L  VR H V ++
Sbjct: 521 SRTPETAIDKELFALKVKKLTDKVKQRTFTLGT-----VSIGDLLEQMLTMVRSHHVRME 575

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
           G+  +V+V  L+LEG  R+LDP  ++ +
Sbjct: 576 GDFVSVVVAILLLEGIGRQLDPDLDLFE 603


>gi|46128015|ref|XP_388561.1| hypothetical protein FG08385.1 [Gibberella zeae PH-1]
          Length = 690

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 163/521 (31%), Positives = 248/521 (47%), Gaps = 102/521 (19%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFREL---------WLHVVLRTLETAG 228
           ++E V    R L L V+F P I+  P A  FG +  +          W   ++  +E AG
Sbjct: 123 IIEPVCTGFRFLQLVVIFVPVIITIP-AIYFGSRRPDRDNERSGTLWWYGFLVNEMELAG 181

Query: 229 PAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR-LSEIFDGF 287
           PAFIK GQWAA+R D+FP ++C+ +S+LHS AP HS   T+ T+E AFG     EIF+ F
Sbjct: 182 PAFIKLGQWAASRTDIFPTEMCEIMSKLHSNAPAHSLHATRVTVEAAFGGLPFEEIFEEF 241

Query: 288 EEAPVASGSIAQVHRASLR----------------------------FRYPGQKVKPIVV 319
            E P+  G+IAQV++A L+                             +   Q++    V
Sbjct: 242 HEKPLGVGAIAQVYKAKLKPGLAKPEEAELHDSYHLAQNVKRNVDTVLKSSPQRIPSSYV 301

Query: 320 AVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAA 379
           A+KV HP V  ++RRD  I+   A + ++IP ++WL L + V QF   M  Q+DL  EAA
Sbjct: 302 AIKVLHPRVERTVRRDLRIMGFFASLLNLIPTIEWLSLPDEVTQFGEMMKLQLDLRIEAA 361

Query: 380 HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHI 439
           +L+ F  NF+      FP P        VL+E Y QG  ++ +++   G    +  +A  
Sbjct: 362 NLATFRKNFKDRSTAWFPYPYTEYTTRNVLIEEYAQGIPLADFME--NGGGVFQHDIADE 419

Query: 440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRS------------------- 480
           G  A L+MLL+DNF+HAD+HPGNI+VR  Q      RL ++                   
Sbjct: 420 GLDAFLRMLLLDNFVHADLHPGNIMVRFYQSAHPDLRLRKAMTKAHPDEAEDVTEQVLER 479

Query: 481 -------------------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
                                    +P +IF+D G+  EL+  +R N ++ F+AVA  DG
Sbjct: 480 LRPYRHRKDTKAWQDELAKIDAEGFRPQLIFIDTGLVTELNAVNRENFLDLFRAVAEFDG 539

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF----------WGTPEGDLVHPAECMQQL 565
             A          + C  P A +++  E FA             T     V   + +Q++
Sbjct: 540 YKAGHLMC-----ERCRQPDAVLDK--EVFALKMQHLVLSVKSRTLALGNVKIGDILQEV 592

Query: 566 LEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           L  VR H V ++G+   V+++ L+LEG  R L+P  +++ +
Sbjct: 593 LSMVRNHHVRLEGDFVNVVISILLLEGIGRSLNPDVDLLSS 633


>gi|390604592|gb|EIN13983.1| ABC1-domain-containing protein [Punctularia strigosozonata
           HHB-11173 SS5]
          Length = 681

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 152/528 (28%), Positives = 248/528 (46%), Gaps = 104/528 (19%)

Query: 180 ECVILLMRALYLGVLFSPSIMMAPF-----------ADSFGPQFRELWLHVVLRTLETAG 228
           E ++   R +YL ++F+P ++ AP             D +G  +   W   ++  +  AG
Sbjct: 105 EPILTGRRCIYLILVFTPVLVTAPMLLVGKPEKKYDGDRWGAVW---WYEFLVTQMNRAG 161

Query: 229 PAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFE 288
           P FIK  QWA +R DLFP  LC++L  LHS+   HS  +T++ IE  F R   ++F+ F+
Sbjct: 162 PTFIKLAQWAGSRTDLFPPILCQRLGALHSRGTPHSLRHTRRVIEDVFQRPFDDVFEAFD 221

Query: 289 EAPVASGSIAQVHRASLRF-----------------RYPG-------QKVKPIV----VA 320
           E P+  G+IAQV+RA+L+                  + P        Q   P+V    VA
Sbjct: 222 ETPIGVGAIAQVYRATLKHDLLPPSYVTPKRARKSQKLPAALAPVSMQDPPPVVPTAAVA 281

Query: 321 VKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAH 380
           +K+ HP V + I RD  I++  A + ++ P ++WL L E V  F   M  QVDL  EA +
Sbjct: 282 IKILHPKVTKLIARDLSIMSFFAHLITLFPGMQWLSLPEEVDVFGKMMYEQVDLRNEAEN 341

Query: 381 LSRFIYNFRRWKD-VSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHI 439
           L +F  NF+  KD V+FP+P+       +LVE Y+    +  ++    G       LA +
Sbjct: 342 LVKFEENFQGRKDPVTFPRPLKVWSTKDILVEEYQNALSLEAFLK--NGGGPFNDGLAEM 399

Query: 440 GTHALLKMLLVDNFIHADMHPGNILVRVAQK------KSSQKRLFRSKP----------- 482
           G  A L MLL+DNF+H+D+HPGNI+V+  +       KS    LF S P           
Sbjct: 400 GLDAFLNMLLLDNFVHSDLHPGNIMVKFCRPSTRRLLKSVWTSLFSSSPDPPVSETFNTA 459

Query: 483 ---------------------------------HVIFLDVGMTAELSKTDRVNLVEFFKA 509
                                             V+F+D G+   L+  +R N ++ F+A
Sbjct: 460 ESDALIARLRALEHDPAAWRAALSELHSQGYVPEVVFIDAGLVTTLNGNNRRNFLDLFRA 519

Query: 510 VARRDGRTAAECTLRLSKQQNCP----NPKAFIEEVDEAFAFWGTPEGDL--VHPAECMQ 563
           +A  DG  A +    + ++  CP    +P+ F  ++             L  +  ++ + 
Sbjct: 520 IAEFDGYRAGQL---MVERCRCPELALDPETFALKMQHLVLNVKRKTFSLGQIKISDILT 576

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           ++L+ VR H V ++G+    +++ L+LEG  R+LDP  ++  +   +L
Sbjct: 577 EVLKAVRVHHVKMEGDFVNTVISILLLEGIGRQLDPDLDLFKSALPIL 624


>gi|346323484|gb|EGX93082.1| ubiquinone biosynthesis protein, putative [Cordyceps militaris
           CM01]
          Length = 688

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 156/473 (32%), Positives = 233/473 (49%), Gaps = 91/473 (19%)

Query: 216 WLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           W   +++ +E AGPAFIK GQWAA+R D+FP +LC+ LS+LHS AP HS   T+ T+E A
Sbjct: 171 WYGFMVKAMELAGPAFIKLGQWAASRSDIFPNELCESLSKLHSNAPAHSMRVTRATVEAA 230

Query: 276 FGRR-LSEIFDGFEEAPVASGSIAQVHRASLR---------------------------- 306
           FG R   EIFD FEE P+  G+IAQV++A L+                            
Sbjct: 231 FGGRPFEEIFDEFEEKPLGVGAIAQVYKAKLKPDVASPADSDIVMNKDMADNVKHHVKTV 290

Query: 307 FRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV 366
                 +V    VA+KV HP V  ++RRD  I+   A + + IP ++WL L   V+QF  
Sbjct: 291 LMSSPSRVPSTYVAIKVLHPHVERTVRRDLRIMGFFASMLNAIPTMEWLSLPGEVEQFGE 350

Query: 367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDEL 426
            M  Q+DL  EAA+L+ F  NF+      FP P        VL+E Y QG  ++ +++  
Sbjct: 351 MMKLQLDLRIEAANLATFRQNFKDRSTAWFPYPYTDFTTRNVLIEEYAQGIPLADFME-- 408

Query: 427 QGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVR-------------------- 466
            G    +  +A  G  A L+MLL+DNF+HAD+HPGNI+VR                    
Sbjct: 409 NGGGVFQHDIADEGLDAFLRMLLLDNFVHADLHPGNIMVRFYRSARPELPMRRAPDAPPA 468

Query: 467 ------VAQKKSSQKRLFRS-----------------KPHVIFLDVGMTAELSKTDRVNL 503
                 V ++   + R +R                  +P ++F+D G+  EL+ T+R N 
Sbjct: 469 AHDPSDVTEEVLERLRPYRRDRTAWQAELATIDAEGFRPQLVFIDTGLVTELNATNRKNF 528

Query: 504 VEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFW----------GTPEG 553
           ++ F+AVA  DG  A          + C  P+A +++  E FA             T   
Sbjct: 529 LDLFRAVAEFDGYKAGHLMC-----ERCRQPEAVLDK--EVFALKMQHLVLSVKSRTLAL 581

Query: 554 DLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
             V   + +QQ+L  VR H V ++G+   V+++ L+LEG  R L+P  +++ +
Sbjct: 582 GNVKIGDILQQVLAMVRGHHVRLEGDFVNVVISILLLEGIGRSLNPDVDLLSS 634


>gi|409051851|gb|EKM61327.1| hypothetical protein PHACADRAFT_83337 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 717

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 155/562 (27%), Positives = 256/562 (45%), Gaps = 114/562 (20%)

Query: 155 PSQNAFYTRAQDGHAFVTSVLY----SLVECVILLMRALYLGVLFSPSIMMAPFADSFGP 210
           P +    + A+   + V+ V+     ++ E ++   R ++L +LF P ++ +P      P
Sbjct: 90  PPEPTISSPAEPNRSLVSQVVCFLRDNVWEPILTTRRLVHLLILFVPVLLTSPMLLVGKP 149

Query: 211 QFREL---------WLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAP 261
           + +EL         W   +   ++ AGP F+K GQWAA+R DLFP  LC ++  LHS+  
Sbjct: 150 E-KELGGDRWGAVWWYEFLTAQMQRAGPTFVKLGQWAASRADLFPTLLCDRMGALHSRGK 208

Query: 262 EHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLR--------------- 306
            H F +T+  IE  F R   E+F+ FE  P+ +G+IAQV+RA LR               
Sbjct: 209 AHPFNHTRHVIEHVFQRPFDEVFEEFEVTPIGTGAIAQVYRAKLRSDLIPPSHLAPKRAR 268

Query: 307 ----------FRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLR 356
                       +P ++V    VA+K+ HP V   I RD  I+   A + ++IP V+WL 
Sbjct: 269 PSGPAALTPAILHPREEVPTNAVAIKILHPRVQNLINRDLKIMAFFADVLTLIPGVQWLS 328

Query: 357 LDESVQQFAVFMMSQVDLAREAAHLSRFIYNFR-RWKDVSFPKPVYPLVHPAVLVETYEQ 415
           L E V+ F   M  Q+DL  E+ +L  F   F  R   V+FP+P+       +LVE Y+ 
Sbjct: 329 LPEEVEVFGRMMREQLDLRNESHNLVEFENRFAGRRLPVTFPRPLDLWSTRDMLVEEYQN 388

Query: 416 GECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQK----- 470
              +  ++    G       LA +G  A L MLL+DNF+H+D+HPGNI+++ A+      
Sbjct: 389 ALSLEDFLH--NGGGPYNDVLAEVGLDAFLNMLLLDNFVHSDLHPGNIMIKFAKPQSTVL 446

Query: 471 --KSSQKRLFRSK----------------------------------------------- 481
             KS+   L++SK                                               
Sbjct: 447 LLKSAWNALWKSKLQQAKEELAHASSMFADPTTENIVDELRQLRKNPQAWQAQLQKIHDE 506

Query: 482 ---PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL-RLSKQQNCPNPKAF 537
              P +IF+D G+   L   +R N ++ F+A+A  DG  A E  + R    +   +P+ F
Sbjct: 507 GYLPKIIFIDAGLVTTLDSNNRRNFLDLFRAIAEFDGYRAGELMVERCRTPELAVDPETF 566

Query: 538 IEEVD--------EAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLV 589
             ++         + F+       D++H       +L+ VR H + ++ +    +++ L+
Sbjct: 567 ALKMQHIVLQVKRKTFSLGQIKISDILH------SVLKAVREHHIKMEADFVNTVISVLL 620

Query: 590 LEGWQRKLDPGYNVMDTLQTLL 611
           LEG  R+LDPG ++  +   +L
Sbjct: 621 LEGIGRRLDPGLDLFKSALPIL 642


>gi|396490224|ref|XP_003843285.1| similar to ABC1 family protein [Leptosphaeria maculans JN3]
 gi|312219864|emb|CBX99806.1| similar to ABC1 family protein [Leptosphaeria maculans JN3]
          Length = 698

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 178/622 (28%), Positives = 275/622 (44%), Gaps = 126/622 (20%)

Query: 89  HQAQIAWKRLFYYSSFRDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVS 148
           H    A+ RLF    FR +          A +     SP+     +A  + Q    ++  
Sbjct: 36  HSNASAFSRLFATPRFRGKTIRWSGAATGAAAAGAVLSPM---AFVAIGNDQSDSGEKTH 92

Query: 149 AET----------EYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPS 198
            E           E+ P      T+ Q G  F   +   ++E +   +R L+L ++F P 
Sbjct: 93  EEAMLEASRKELKEHVPKVLENSTKYQRGLYFF--IEDYIIEPIATGIRFLHLIIIFVPV 150

Query: 199 IMMAPFADSFGPQ--FRE-------LWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDL 249
           I+  P A   G +   R+        W   ++ ++E AG AFIK GQWAA+R D+FP +L
Sbjct: 151 IVSIP-AIWLGAKQPHRDNERSGTLWWYGFLVLSMERAGAAFIKLGQWAASRTDVFPTEL 209

Query: 250 CKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAPVASGSIAQVHRASLR-- 306
           C  +S LHS AP H  + +K+TIE AF G+   +IF+ F++ P+  G+IAQV++A L+  
Sbjct: 210 CSIMSTLHSNAPAHPLSISKQTIEAAFDGQSFDDIFEEFDDVPLGVGAIAQVYKAKLKPH 269

Query: 307 ---------------------------FRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
                                       +    +V    VAVKV HP + + +RRD  I+
Sbjct: 270 LATLNDTISAEEKPNLVRKIKKNVDVTLKNTPSRVPSTHVAVKVLHPKIEKIVRRDLRIM 329

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
              A I + +P ++WL   + V+QF   M  Q+DL  EAA+L+ F  NF+      FP P
Sbjct: 330 AFFAAIINAVPTMEWLSFPDEVEQFGEMMRLQLDLRIEAANLTLFRRNFKDRTTAWFPFP 389

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
                   VL+E + QG  +  ++    G    +  +A  G  A L MLL+DNFIHAD+H
Sbjct: 390 YTEYTTRNVLIEEFAQGIPMEDFLQ--NGGGVFQKDIADEGLDAFLTMLLIDNFIHADLH 447

Query: 460 PGNILVR----------------------VAQKKSSQKRLFRSKPH-------------- 483
           PGNI+VR                         +  +++ L R +PH              
Sbjct: 448 PGNIMVRFYKPEQLDVSIFTRKENRTTGPTESRDVTEEVLERLRPHRKDPERWRAKLQEI 507

Query: 484 --------VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPK 535
                   +IF+D G+  EL+  +R N ++ FKAVA  DG  A          + C  P 
Sbjct: 508 DKEGYRPQLIFIDTGLVTELNAKNRANFLDLFKAVAEFDGYKAGHLM-----TERCRQPD 562

Query: 536 AFIE-EV-------------DEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVC 581
           A ++ EV                FA      GD+      + ++L  VR H V ++G+  
Sbjct: 563 AVLDGEVFALRMQHLVLGVKSRTFALGNIKIGDI------LNEVLSMVRTHHVRLEGDFV 616

Query: 582 TVMVTTLVLEGWQRKLDPGYNV 603
            V+++ L+LEG  R L+P  ++
Sbjct: 617 NVVLSILLLEGIGRSLNPDLDL 638


>gi|255935983|ref|XP_002559018.1| Pc13g05840 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583638|emb|CAP91653.1| Pc13g05840 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 632

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 159/532 (29%), Positives = 252/532 (47%), Gaps = 101/532 (18%)

Query: 186 MRALYLGVLFSPSIMMAP-------FADSFGPQFRELWLH-VVLRTLETAGPAFIKWGQW 237
           +R ++L ++F P +   P            G +   LW +  +++ +E AGPAFIK GQW
Sbjct: 69  VRFVHLAIIFIPVVATVPAIWVGRKVQGRGGARSGTLWWYRFLVKAMERAGPAFIKLGQW 128

Query: 238 AATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAPVASGS 296
           AA+R D+FP ++C  +S LHS AP HS   TK+ I +AF G    +IF+ F+E P+  G+
Sbjct: 129 AASRTDIFPPEMCNIMSSLHSNAPAHSLHQTKRIIRKAFNGLPFEDIFEEFQEEPLGVGA 188

Query: 297 IAQVHRASLRF--------------RYP--GQKVKPIV---------------VAVKVRH 325
           IAQV++A L+               + P  G+KV+  V               VA+KV+H
Sbjct: 189 IAQVYKAKLKPSLAATHEEELGVEPKLPTLGEKVRKNVDVLVKSSPQRVPSSYVAIKVQH 248

Query: 326 PGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFI 385
           P V + I RD  I++  A + ++IP + WL   + V QF   M  Q+DL  EAA+L  F 
Sbjct: 249 PRVEQMIHRDLRIMSFFAHMINIIPTMHWLSFPDEVHQFGEMMKLQLDLRIEAANLVIFR 308

Query: 386 YNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALL 445
             F       FP P        VLVE + QG  ++ ++D   G    +  +A+ G  A L
Sbjct: 309 QKFNSRTTAWFPYPYLEYTTREVLVEEFAQGIPLATFLD--IGGGSYQHDIANEGLDAFL 366

Query: 446 KMLLVDNFIHADMHPGNILVRV----------------------AQKKSSQKRLFRSKPH 483
            MLL+DNF+HAD+HPGNI+VR                       A+   ++  L R +P+
Sbjct: 367 HMLLIDNFVHADLHPGNIMVRFYTPSELDLSLGKRSRAFDAPTRAEVDVTEAVLERLRPN 426

Query: 484 ----------------------VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
                                 +IF+D G+  +L+ T+R N ++ F+A+A  DG  A + 
Sbjct: 427 LNDTEDWKAALSQLNDEGYRPQLIFIDTGLVTQLNDTNRQNFLDLFRAIAEFDGYRAGQL 486

Query: 522 TL-RLSKQQNCPNPKAFIEEVDE--------AFAFWGTPEGDLVHPAECMQQLLEKVRRH 572
            + R    +   +P+ F  ++           FA      GD+      + ++L  VR H
Sbjct: 487 MVERCRTPEEVIDPEIFALKMQHLVLSIKSRTFALGSVKIGDI------LSEVLTMVRGH 540

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYTI 624
            V  +G+   V+++ L+LEG  R L+P  ++  +   +L +     S   T+
Sbjct: 541 HVRFEGDFVNVVISCLLLEGIGRTLNPNLDLFKSALPILRQLGSGSSFLETV 592


>gi|409083778|gb|EKM84135.1| hypothetical protein AGABI1DRAFT_124459 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 682

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 150/528 (28%), Positives = 243/528 (46%), Gaps = 115/528 (21%)

Query: 180 ECVILLMRALYLGVLFSPSIMMAPF-----------ADSFGPQFRELWLHVVLRTLETAG 228
           E ++   R ++L  LF P I+ +P             D +G  +   W  +++R +  AG
Sbjct: 99  EPILTAKRFIHLFALFVPVIVTSPMLLVGHPEKLLKGDRWGAVW---WYRLLVRQMAAAG 155

Query: 229 PAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFE 288
           P FIK  QWAA+R DLFP  LC+ L  LHS+   HS  +TKK IER F R   ++F+ F+
Sbjct: 156 PTFIKLAQWAASRRDLFPVQLCEMLGSLHSRGKPHSLEHTKKVIERVFERSFDDVFEEFD 215

Query: 289 EAPVASGSIAQVHRASLRF--------------RYPGQKVKPIV------------VAVK 322
           E P+ +G+IAQV+RA+L+               + PG    P++            VA+K
Sbjct: 216 EHPIGTGAIAQVYRATLKNDLLPPSYLGPRRKRKTPGGAFAPVILQDPPPSVPTASVAIK 275

Query: 323 VRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLS 382
           + HP V ++I RD  I++  A   S++P ++W+ L + V+ F   M  Q+DL  E  +L 
Sbjct: 276 ILHPRVSKTISRDLSIMHFFASAISLLPGMRWISLPQEVEVFGSMMNQQLDLRNEVENLI 335

Query: 383 RFIYNFRRWK-DVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGT 441
            F  NF   K  V+FP+P+       VL+E +E    +  ++    G       +A +G 
Sbjct: 336 VFENNFAHRKVPVTFPRPLKVWSTQDVLIEEFENALPLEAFLR--NGGGPYDDQVATVGL 393

Query: 442 HALLKMLLVDNFIHADMHPGNILVRVAQ------------------KKSSQKRLFRSK-- 481
            A L MLL+DNF+H+D+HPGNI+V+  +                  K S +  +F +   
Sbjct: 394 DAFLNMLLLDNFVHSDLHPGNIMVKFCKPLNTRMVLENLYNHIFHKKASPESTIFSTLNP 453

Query: 482 -------------------------------------PHVIFLDVGMTAELSKTDRVNLV 504
                                                P ++F+D G+   L  T+R N +
Sbjct: 454 PADYSDSDKIVSRLRKLEDQPIEWHAELEHLHSSGYIPEIVFIDAGLVTTLDNTNRRNFL 513

Query: 505 EFFKAVARRDGRTAAECTLRLSKQQNCP-NPKAFIEEVD--------EAFAFWGTPEGDL 555
           + F+AVA  DG       +  S+      N + F  ++         + F+       DL
Sbjct: 514 DLFRAVAEFDGYKTGHLMIERSRSPELAINTETFALKMQHLVLSVKRKTFSLGQIKISDL 573

Query: 556 VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
                 + ++L+ VR H V ++G+    +++ L+LEG  R+LDPG ++
Sbjct: 574 ------LTEVLKNVREHHVKLEGDFINTVISILLLEGIGRQLDPGLDL 615


>gi|393244467|gb|EJD51979.1| ABC1-domain-containing protein [Auricularia delicata TFB-10046 SS5]
          Length = 678

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 151/503 (30%), Positives = 239/503 (47%), Gaps = 85/503 (16%)

Query: 187 RALYLGVLFSPSIMMAP------FADSFGPQFRELWLH-VVLRTLETAGPAFIKWGQWAA 239
           R ++L VLF P I+ AP         + G +   LW +  ++  +E AGP FIK  QWA 
Sbjct: 118 RFVHLLVLFLPVILTAPALLLGHVDRASGERAGALWWYGFLVSQMEHAGPTFIKLAQWAG 177

Query: 240 TRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQ 299
           +R DLFP  LC + S  HS    HSFA+TK+ IER FGR   E+F+ F++ P+ SG+IAQ
Sbjct: 178 SRADLFPPMLCDRFSATHSSGKVHSFAHTKRVIERVFGRPFDEVFEEFDQVPLGSGAIAQ 237

Query: 300 VHRASLR-------FRYPGQ----------KVKPIV--------VAVKVRHPGVGESIRR 334
           VHRA+LR       +  P +          +V P          VA+K+ HP V + I R
Sbjct: 238 VHRATLRSDLLPPDYLNPKRSHQAEHRKLIQVDPPAPVDVPSASVAIKILHPRVSKMIER 297

Query: 335 DFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF-RRWKD 393
           D  I++  A   + IP  +WL L E V  F   M  Q+DL  E  +L RF  NF  R   
Sbjct: 298 DLSIMSFFAHALTFIPGAEWLSLPEEVAVFGEMMRGQLDLRNEVENLQRFEKNFATRQTP 357

Query: 394 VSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNF 453
           +SFP+P+       V++E Y     ++ ++    G     + +A +G    L MLL+DNF
Sbjct: 358 ISFPRPLDEFSSHDVMIEEYIHALPLNAFLK--NGGGPFDAVIAELGLDGFLHMLLLDNF 415

Query: 454 IHADMHPGNILVRVAQKKSS-------------------------------------QKR 476
           +H+D HPGN+L++  +  +S                                     Q  
Sbjct: 416 VHSDAHPGNLLIKFYKPSTSYLLKGIAASIFKLAGPEDPTMTPDASAAVDRLRSLAKQPE 475

Query: 477 LFRS----------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL-RL 525
            +R+          +P ++FLD G+   L+  +R N ++ F+A+A  DG  A    + R 
Sbjct: 476 EWRAELTQLHDAGYRPEIVFLDAGLVTTLNDKNRKNFLDLFRAIAEFDGYRAGRLMVERC 535

Query: 526 SKQQNCPNPKAFIEEVDEAFAFWGTPEGDL--VHPAECMQQLLEKVRRHRVNVDGNVCTV 583
              +   +P+ F  ++        +    L  +  A+ +  +L+ VR+H V ++ +    
Sbjct: 536 RTPELAVDPETFALKIQNLVLSVKSKTFSLARIRIADVLTDVLKFVRQHHVKMEADFVNT 595

Query: 584 MVTTLVLEGWQRKLDPGYNVMDT 606
           +++ L+LEG  R+LDP  ++  +
Sbjct: 596 VISILLLEGIGRQLDPTLDLFKS 618


>gi|156847144|ref|XP_001646457.1| hypothetical protein Kpol_1048p30 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117134|gb|EDO18599.1| hypothetical protein Kpol_1048p30 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 622

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 146/444 (32%), Positives = 214/444 (48%), Gaps = 60/444 (13%)

Query: 215 LWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIER 274
           LW  ++   LE AGP+FIK GQWA +R DLFP   C ++ +LHS    HS  YTK  +  
Sbjct: 176 LWFKMLRYCLELAGPSFIKLGQWAGSRTDLFPAGFCHEVMKLHSNVNPHSLEYTKLKVCS 235

Query: 275 AFG---RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQK-----VKPIVVAVKVRHP 326
           A          +F  F + P+  G+IAQVH A+    Y   K          VA+K+ HP
Sbjct: 236 ALDIPQEDFDYVFQEFSDEPIGIGAIAQVHLATFSEDYFNYKQLKSSFSNRDVAIKIIHP 295

Query: 327 GVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIY 386
                I RD  I+N  A +   IP ++WL   + V++F+  M  Q+DL  E  +L+RF  
Sbjct: 296 SARTKINRDLKIMNFFANLLDSIPTIEWLSFPDEVREFSYLMNLQLDLRIECLNLNRFND 355

Query: 387 NFRRWKDVSFPKPVYPLVHPAVLVETYEQG----EC--VSRYVDELQGHERLKSALAHIG 440
           NF+    V FP     L    VL E +  G    EC  V  Y+++   +  L   ++   
Sbjct: 356 NFKDNIKVKFPIGHIELTTRDVLFEEFIDGLPIQECLNVKDYINDY--NPLLFKKISDPF 413

Query: 441 THALLKMLLVDNFIHADMHPGNILVRVAQ----------------------KKSSQKRLF 478
            +A L+ML++D+F+HAD+HPGN+LVR  +                      K SS+   F
Sbjct: 414 INAFLQMLILDDFVHADLHPGNVLVRFIKTDKYENNIISTESESSKIIDSLKNSSKNGNF 473

Query: 479 RSK---------PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQ 529
             +         P V F+D G+  EL++T+RVN ++ F A+AR DG  A E  +  SK  
Sbjct: 474 TDRLVEVLEEYTPQVCFIDTGLITELNETNRVNFIDLFNALARFDGYRAGELMIERSKTP 533

Query: 530 NCPNPK--------AFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVC 581
                K          I +V +     GT     V   E + Q+L  VR H V ++G+  
Sbjct: 534 ETAIDKELFAIKTEKLIAKVKKKTFTLGT-----VSIGELLDQMLNMVRYHHVRLEGDFV 588

Query: 582 TVMVTTLVLEGWQRKLDPGYNVMD 605
           +V+V  L+LEG  R+LDP  ++ +
Sbjct: 589 SVIVAILLLEGIGRQLDPNLDLFE 612


>gi|254577659|ref|XP_002494816.1| ZYRO0A10318p [Zygosaccharomyces rouxii]
 gi|238937705|emb|CAR25883.1| ZYRO0A10318p [Zygosaccharomyces rouxii]
          Length = 603

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 153/498 (30%), Positives = 241/498 (48%), Gaps = 80/498 (16%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE--------------LWLHVVLRT 223
           LVE +  ++R + +  +F+P ++  P    FG + +               +W  ++ + 
Sbjct: 100 LVEPIYTMLRFIEIFAIFAPVLICYPIT-FFGRRHKLDRDEVHILETSGSLIWYRLLRKA 158

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRL--S 281
           LE AGP+FIK GQWA +R D+F   LC +LS LHS +  HS  Y+K+ I ++   +    
Sbjct: 159 LELAGPSFIKLGQWAGSRTDMFSPGLCHELSNLHSNSKPHSLKYSKQRICQSLDNQFEFD 218

Query: 282 EIFDGFEEAPVASGSIAQVHRASL--RFRYPGQKVKPIV--------VAVKVRHPGVGES 331
           EIFD F E P+  G+IAQV+   L  +F    Q              VAVKV HP  G+ 
Sbjct: 219 EIFDEFREKPLGVGAIAQVYMGKLSDKFIRSMQNQNTDFDGNDSDGWVAVKVIHPNCGKK 278

Query: 332 IRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRW 391
           I RD  I+   A +   +P + WL L   V+QF++ M  Q+DL  E+ +L+RF  NF   
Sbjct: 279 INRDLKIMQFIANVIDELPTMVWLSLPAEVEQFSILMRLQLDLRIESLNLTRFNKNFENS 338

Query: 392 KDVSFPKPVYPLVHPAVLVETYEQG---ECVSRYVDELQGHERLKSALAHIGTHALLKML 448
               FP+         VL E Y  G   E   +  D+L+  E  K  ++ +   A L+ML
Sbjct: 339 LQTKFPRGFPQFSSREVLFEEYIHGFPMETFLQVKDKLRSTELCKK-VSDLFIDAFLQML 397

Query: 449 LVDNFIHADMHPGNILVR---------------------------VAQKKSSQKRLFRSK 481
           ++D+FIHAD+HPGN+++R                           +A + +S + +   K
Sbjct: 398 ILDDFIHADLHPGNVMIRFLKTDKYGTHVTSTEREHFSIVHKLRQLAHENNSDELVKELK 457

Query: 482 -------PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ-QNCPN 533
                  P + F+D G+  EL+K +R+N +  F A+AR DG  A E  +  S+  +   +
Sbjct: 458 YALQEYTPQICFIDAGLITELNKQNRINFIALFNALARFDGYQAGELMIERSRTPETAVD 517

Query: 534 PKAFIEEVDE--------AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMV 585
            + F  +V++         F       GDL      + Q+L  VR H V ++G+  +V+V
Sbjct: 518 KELFAFKVEKLVTKVKKRTFTLGTVSIGDL------LDQMLTMVRSHHVRMEGDFVSVVV 571

Query: 586 TTLVLEGWQRKLDPGYNV 603
             L+LEG  R+LDP  ++
Sbjct: 572 AILLLEGIGRQLDPELDL 589


>gi|449550937|gb|EMD41901.1| hypothetical protein CERSUDRAFT_147303 [Ceriporiopsis subvermispora
           B]
          Length = 721

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 151/529 (28%), Positives = 244/529 (46%), Gaps = 106/529 (20%)

Query: 180 ECVILLMRALYLGVLFSPSIMMAPF-------ADSFGPQFRELWLHVVLRT-LETAGPAF 231
           E ++   R ++L  LF P ++ AP        A   G ++  +W +  L   ++ AGP F
Sbjct: 126 EPILTTRRMIHLMWLFIPVMLSAPMLLVGKPDAKLHGDRWGAVWWYGYLTNQMQRAGPTF 185

Query: 232 IKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAP 291
           +K  QWAA+R DLFP  LC++L  LHS+   HSFA+TK+ IER F R   E+F+ F+  P
Sbjct: 186 VKLAQWAASRADLFPALLCERLGALHSRGRPHSFAHTKRVIERVFQRPFDEVFEEFDHTP 245

Query: 292 VASGSIAQVHRASLR-------------------------FRYPGQKVKPIVVAVKVRHP 326
           + SG+IAQV+RA+L+                          + P   V    VA+K+ HP
Sbjct: 246 IGSGAIAQVYRATLKHDLIPPSHLTPKRKRKSPTVIPSALVQEPPVSVPSTAVAIKILHP 305

Query: 327 GVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIY 386
                I+RD  I++  A + S+ P ++WL L E V+ F   M  Q+DL RE  +L+ F  
Sbjct: 306 RAASLIQRDLRIMSFFAHVISLFPGMQWLSLPEEVEVFGRMMHEQLDLRREGENLTIFEK 365

Query: 387 NFRRWK-DVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALL 445
           NF   K  ++FP+P+       +LVE Y+    +  ++   +G       LA +G    L
Sbjct: 366 NFAHRKLPITFPRPLETWTTKDILVEEYQNALPLEWFLH--RGGGPYNDQLAEVGLDTFL 423

Query: 446 KMLLVDNFIHADMHPGNILVRVAQKKS--------------------------------- 472
            MLL+DNF+H+D+HPGNI+++  Q  +                                 
Sbjct: 424 NMLLLDNFVHSDLHPGNIMIKFVQPPTLTVKGAIATIFGHSSSDESVPQPHTEAADALND 483

Query: 473 ---SQKRLFRSKP-----------------HVIFLDVGMTAELSKTDRVNLVEFFKAVAR 512
              S+ R   + P                  ++F+D G+   L + DR N ++ F+AVA 
Sbjct: 484 AVVSRLRELSNDPPSWRAELESLHEQGYMPEIVFVDAGLVTTLDEVDRRNFLDLFRAVAE 543

Query: 513 RDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF----------WGTPEGDLVHPAECM 562
            DG  A    +     + C  P+  ++   E FA             T     +  ++ +
Sbjct: 544 FDGYRAGTLMV-----ERCRMPELAVDP--ETFALRMQHIVLNVKRKTFSLGQIKISDIL 596

Query: 563 QQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             +L  VR+H V ++ +    +++ L+LEG  R+LDPG ++  +   +L
Sbjct: 597 TDVLRAVRQHHVKMEADFVNTVISILLLEGIGRQLDPGLDLFKSALPIL 645


>gi|444316260|ref|XP_004178787.1| hypothetical protein TBLA_0B04310 [Tetrapisispora blattae CBS 6284]
 gi|387511827|emb|CCH59268.1| hypothetical protein TBLA_0B04310 [Tetrapisispora blattae CBS 6284]
          Length = 684

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 150/510 (29%), Positives = 243/510 (47%), Gaps = 89/510 (17%)

Query: 177 SLVECVILLMRALYLGVLFSPSIMMAPFA-----------DSFGPQFRE----LWLHVVL 221
           +++E +  ++R   L  LF P +++ P             D   P+F       W  +V 
Sbjct: 125 NIIEPLATIVRFFQLTSLFLPLVLVYPMTWLGNKVLINANDMKDPEFETTGSIYWFRLVR 184

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRL 280
            +LE AGP+FIK GQWA +R D+  +  C +L +LHS + +HS  YTK  I  +      
Sbjct: 185 ISLELAGPSFIKLGQWAGSRTDILCQAFCNELGKLHSNSRKHSSEYTKDQICNSLNENNF 244

Query: 281 SEIFDGFEEAPVASGSIAQVHRASLRFRYPGQK-----------VKPIVVAVKVRHPGVG 329
             IF+ F ++P   G+IAQVH   ++  Y  +            ++   +AVKV HP V 
Sbjct: 245 ENIFEEFNDSPTGVGAIAQVHVGKIKENYIYKNTYLDEDNRKYLLQNKWLAVKVLHPNVR 304

Query: 330 ESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFR 389
             I+RD  ++   A I + IP ++WL L + VQQF +FM  Q+DL  E+ +LS F  NF 
Sbjct: 305 TIIKRDIKLMRFFANIINAIPTMEWLSLPDEVQQFEIFMNLQLDLRIESMNLSMFNKNFE 364

Query: 390 RWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLK-----SALAHIGTHAL 444
            + ++ FPK    +    VL E Y +   +  +   L+   +L      S LA +     
Sbjct: 365 NFPNIKFPKSFTEITTNNVLFEEYIKAFPMEHF---LKIKMKLMTLFYFSELAPLLWIHF 421

Query: 445 LKMLLVDNFIHADMHPGNILVR-----------VAQKKSSQK------RLFRSK------ 481
           LKML++D+FIHAD+HPGN+L+            ++ ++ S +      RL++        
Sbjct: 422 LKMLIIDDFIHADLHPGNVLINFIKMDNNGTKVISNEEESYQIVHKLMRLYKDSRIDEAK 481

Query: 482 ----------------PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL 525
                           P + F+D G+  EL+  +RVN +  F A+ R DG  A E  +  
Sbjct: 482 KPEFISDMKYVLNEYTPQICFIDTGLVTELNSRNRVNFIALFNALVRFDGYEAGELMIER 541

Query: 526 SKQ-QNCPNPKAFIEEVDE--------AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
           S+  +   + + F  +V++         F       GDL      +QQ+L  VR H V +
Sbjct: 542 SRTPETAVDKEIFAMKVEKLIDKVKKRTFTLGTVSIGDL------LQQMLNMVRHHHVRL 595

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           +G+  +++V  L+LEG  R+LDP  ++  +
Sbjct: 596 EGDFVSIVVAILLLEGIGRQLDPDMDLFSS 625


>gi|322780736|gb|EFZ09993.1| hypothetical protein SINV_04903 [Solenopsis invicta]
          Length = 547

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 151/471 (32%), Positives = 231/471 (49%), Gaps = 79/471 (16%)

Query: 218 HVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG 277
           +++ + +E  GP FIK+GQW +TR D+FPR++C  LS+L   A  H + YT++ +E  +G
Sbjct: 80  NILRKGIEFLGPIFIKFGQWVSTRRDVFPRNVCDTLSQLQRNATSHPWLYTERLLEATYG 139

Query: 278 RRLSEIFDGF-EEAPVASGSIAQVHRASL----------------RFRYPGQKVKPI--- 317
                +F  F +E P+ SG  AQV++A +                R  Y G +  P    
Sbjct: 140 PSWRNLFVKFDDEGPIGSGCCAQVYKAWIDLSATRDPRTSRFVENRTLYEGDEFAPTSPR 199

Query: 318 -----VVAVKVRHPGVGESIRRDFVIINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQ 371
                 VAVKV HPG+ + ++RD  I+   +K ++ +IP + WL L + + +FA  M  Q
Sbjct: 200 ARKLQAVAVKVLHPGIKDQLKRDIAIMRGFSKCVTYLIPNLHWLSLTDCIDEFARIMEDQ 259

Query: 372 VDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHER 431
           VD+  EA++L RF  NF R  D++FP P   L    +LVE++ +G  +S Y++       
Sbjct: 260 VDMRLEASNLVRFSANFSRRSDIAFPYPYTHLTRRGILVESFHEGSPISDYLE--HDDAA 317

Query: 432 LKSALAHIGTHALLKMLLVDNFIHADMHPGNILV-RVAQKKSSQKRLFR---------SK 481
           L+  LA IG   +LKM+  DNFIH D+HPGNILV +    K+S    FR           
Sbjct: 318 LQRKLAKIGIATILKMIFKDNFIHCDLHPGNILVEKAVVPKASLFNTFRRVITLDYVAHD 377

Query: 482 PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE-----------------CTLR 524
           P +I LD G+   L+   R NL + F +V   +G  AA+                 C++R
Sbjct: 378 PRLIILDCGLVVSLNDRCRQNLRDVFYSVLMGNGEMAAQYILEHSSHMTPDPDGFKCSMR 437

Query: 525 ------LSKQQNCPN---PKAFIEE--------VDEAFAFWGT----PEGDLVHPAECMQ 563
                 L    N  N   P  F  E        V E  A +      P+   V+ +  + 
Sbjct: 438 NIIKSHLCNPFNVSNEVYPTKFEREKSLKRRKIVSEVIAMYARHLAYPQ---VNVSTVVS 494

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           +L   + RHRV  DG+  +V+++ LV+EG  R LDP  ++   L   +L +
Sbjct: 495 ELFSAMVRHRVKQDGSFSSVILSMLVIEGLGRCLDPNVDIFTELLPYVLSS 545


>gi|302309811|ref|XP_448011.2| hypothetical protein [Candida glabrata CBS 138]
 gi|196049161|emb|CAG60962.2| unnamed protein product [Candida glabrata]
          Length = 657

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 151/504 (29%), Positives = 236/504 (46%), Gaps = 68/504 (13%)

Query: 177 SLVECVILLMRALYLGVLFSPSIMMAPFA----------DSFGPQFRELWLHVVLRTLET 226
           +++E V+ + R L L  LF P   + P            D    +   +W  ++   LE 
Sbjct: 114 NIIEPVLTVCRFLELMGLFLPVFSLYPICWLGRRIKLNDDITDTRGSIIWCKLIRIALEL 173

Query: 227 AGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSEIFD 285
           AGP+FIK GQWA +R D+F   LC +L +LHSK   HS  Y+KK I  +F      EIFD
Sbjct: 174 AGPSFIKLGQWAGSRTDIFSETLCYELGKLHSKVRPHSIEYSKKMITSSFEVDDFDEIFD 233

Query: 286 GFEEAPVASGSIAQVHRASLRFRYPGQKVKPIV-----VAVKVRHPGVGESIRRDFVIIN 340
            F E P+  G+IAQVH   L   +  +            A+K+ HP V   I RD  I+ 
Sbjct: 234 SFGEKPLGVGAIAQVHVGKLNDAFYNKYSNKTPENNKWCAIKIIHPRVRNQIYRDLKIMK 293

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
             A +   IP ++WL L   V+QF++ M  Q+DL  EA +L RF  NF+    V F  P 
Sbjct: 294 FFACVIDGIPTMEWLSLPNEVEQFSILMKLQLDLRIEALNLKRFNENFKDATQVKFATPY 353

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHALLKMLLVDNFIHAD 457
             L +  VL E Y  G  +  ++ +++ H   + L   ++     A L+ML+ D+F+HAD
Sbjct: 354 LELSNRDVLFEEYLHGFPMEDFL-KVKRHIKDDDLCRRVSDPFVEAFLQMLIRDDFVHAD 412

Query: 458 MHPGNILVRVAQKKSSQKRLFRSK---------------------------------PHV 484
           +HPGN+++R  +      ++  S+                                 P +
Sbjct: 413 LHPGNVMIRFVKTNKYGTQIISSEESSYNISHTLREKWRNKDSDLIPYLKSALTTYTPQI 472

Query: 485 IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPK--------A 536
            ++D G+  EL+  +RVN +  F A+A+ DG  A E  +  S+       K         
Sbjct: 473 CYIDTGLVTELNDRNRVNFIALFNALAQFDGYRAGELMIERSRTPETAIDKDLFALKVEK 532

Query: 537 FIEEVDE-AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQR 595
            +++V +  F       GDL      + Q+L  VR H V ++G+  +V+V  L+LEG  R
Sbjct: 533 LVDKVKQRTFTLGNVSIGDL------LDQMLRMVRSHHVRMEGDFVSVVVAILLLEGIGR 586

Query: 596 KLDPGYNVMDTLQTLLLKADWAKS 619
           +LDP  ++ ++   LL   ++ K 
Sbjct: 587 QLDPDLDLFESSIPLLRDFNFMKE 610


>gi|426201164|gb|EKV51087.1| hypothetical protein AGABI2DRAFT_182069 [Agaricus bisporus var.
           bisporus H97]
          Length = 682

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 243/522 (46%), Gaps = 103/522 (19%)

Query: 180 ECVILLMRALYLGVLFSPSIMMAPF-----------ADSFGPQFRELWLHVVLRTLETAG 228
           E ++   R ++L  LF P I+ +P             D +G  +   W  +++R +  AG
Sbjct: 99  EPILTAKRFIHLFALFVPVIVASPMLLVGHPEKLLKGDRWGAVW---WYRLLVRQMAAAG 155

Query: 229 PAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFE 288
           P FIK  QWAA+R DLFP  LC+ L  LHS+   HS  +T++ IER F R   ++F+ F+
Sbjct: 156 PTFIKLAQWAASRRDLFPVQLCEMLGSLHSRGKPHSLEHTRQVIERVFERSFDDVFEEFD 215

Query: 289 EAPVASGSIAQVHRASLRF--------------RYPGQKVKPIV------------VAVK 322
           E P+ +G+IAQV+RA+L+               + PG    P++            VA+K
Sbjct: 216 EHPIGTGAIAQVYRATLKNDLLPPSYLGPRRKRKTPGGAFAPVILQDPPPSVPTASVAIK 275

Query: 323 VRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLS 382
           + HP V ++I RD  I++  A   S++P ++W+ L + V+ F   M  Q+DL  E  +L 
Sbjct: 276 ILHPRVSKTISRDLSIMHFFASAISLLPGMRWISLPQEVEVFGSMMNQQLDLRNEVENLI 335

Query: 383 RFIYNF-RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGT 441
            F  NF  R   V+FP+P+       VL+E +E    +  ++    G       +A +G 
Sbjct: 336 VFENNFAHRKVPVTFPRPLKVWSTQDVLIEEFENALPLEAFLR--NGGGPYDDQVATVGL 393

Query: 442 HALLKMLLVDNFIHADMHPGNILVR-----------------VAQKKSSQK--------- 475
            A L MLL+DNF+H+D+HPGNI+V+                 +  KK+S +         
Sbjct: 394 DAFLNMLLLDNFVHSDLHPGNIMVKFCKPLNTRMVLENLYNHIFHKKASPESTIFSTLNP 453

Query: 476 --------------RLFRSKP-----------------HVIFLDVGMTAELSKTDRVNLV 504
                         R    +P                  ++F+D G+   L  T+R N +
Sbjct: 454 PADYSDSDKIVSRLRKLEDQPIEWHAELEHLHSSGYIPEIVFIDAGLVTTLDNTNRRNFL 513

Query: 505 EFFKAVARRDGRTAAECTLRLSKQQNCP-NPKAFIEEVDEAFAFWGTPEGDL--VHPAEC 561
           + F+AVA  DG       +  S+      N + F  ++             L  +  ++ 
Sbjct: 514 DLFRAVAEFDGYKTGHLMIERSRSPELAINTETFALKMQHLVLSVKRKTFSLGQIKISDL 573

Query: 562 MQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           + ++L+ VR H V ++G+    +++ L+LEG  R+LDPG ++
Sbjct: 574 LTEVLKNVREHHVKLEGDFINTVISILLLEGIGRQLDPGLDL 615


>gi|422294275|gb|EKU21575.1| aarf domain containing kinase 2 [Nannochloropsis gaditana CCMP526]
          Length = 511

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/445 (31%), Positives = 223/445 (50%), Gaps = 22/445 (4%)

Query: 185 LMRALYLGVLFSPSIMMAPF---ADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATR 241
            +RA  + ++ SP +   P         P+ R  W    L ++E  GP  +K+ QWA+TR
Sbjct: 65  FLRACQVTLVMSPLLATLPIVYVTRHIFPRLRRGWWACALWSIEALGPCMVKFMQWASTR 124

Query: 242 PDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI-FDGFEEAPVASGSIAQV 300
            D+   ++C  L  +  +   H++A TK+ +          +  D  + A V SGS+AQV
Sbjct: 125 RDILAPEVCDLLEPIQWQTRPHTWAQTKQALSTLRADWADVLCIDTDKSAMVGSGSVAQV 184

Query: 301 HRASLRFRYPGQKVK-------PIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVK 353
           +RA+   R              P VVAVKV HPGV   I  D  ++ + A +      ++
Sbjct: 185 YRATTTARLADDARDATAPPPAPRVVAVKVIHPGVKRQIEADLELLRIGAWLVEATGHLQ 244

Query: 354 WLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETY 413
           W  + + V++FA  M  Q+DL  EA  L RF  NF    D+ FP+P +PLV+  VLVE Y
Sbjct: 245 WWSVCDFVEEFAQIMHKQLDLRCEAEALDRFRANFAGRTDIMFPRPSWPLVNEFVLVEDY 304

Query: 414 EQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSS 473
             G  +S  + +     + K A+A  G  A LKM+ +DNF+H D+HPGNI VR       
Sbjct: 305 VSGVPISNILKDPAWPVQEKKAIARSGLDAFLKMVFLDNFVHGDLHPGNIFVR------H 358

Query: 474 QKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPN 533
                ++KPH+ F+D G+  EL++ DR N V+ F A+A   G  A    +  S++  C +
Sbjct: 359 DTEAHKAKPHLTFIDAGIVTELTQQDRRNFVDLFYAIATGQGEAAGRLMIERSRRHECQD 418

Query: 534 PKAFIEE----VDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLV 589
           P+ F       V+EA A      G  +     +Q++L    +++V ++ N  ++++   V
Sbjct: 419 PEGFCRGISRIVEEATAGQHLRLGK-IRVGFLIQKVLALCIQYKVKLESNFASILLAIGV 477

Query: 590 LEGWQRKLDPGYNVMDTLQTLLLKA 614
           LEG  R LDP  +++     ++LK+
Sbjct: 478 LEGVGRSLDPELDILAAATPVILKS 502


>gi|367004733|ref|XP_003687099.1| hypothetical protein TPHA_0I01610 [Tetrapisispora phaffii CBS 4417]
 gi|357525402|emb|CCE64665.1| hypothetical protein TPHA_0I01610 [Tetrapisispora phaffii CBS 4417]
          Length = 626

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 157/572 (27%), Positives = 264/572 (46%), Gaps = 83/572 (14%)

Query: 103 SFRDQIFPCISRIAQAFSLALTRSPLLVPGIIAFTSGQLAWAQRVSAETEYFPSQNAFYT 162
           SF+D + P I     +     ++   L  G+   +  +L  ++   AE     S+N    
Sbjct: 57  SFKDLLSPIIHNETLS---PDSKGDTLEMGLYIASQRELEESKARDAELAIMQSKNILTR 113

Query: 163 RAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFA----------DSFGPQF 212
           + +    +VT +L    E + + +R L L ++F P ++  P +          D    Q 
Sbjct: 114 QLRRLVYYVTDLL----EPLFVTIRFLELSIIFVPILITYPISFFGKRIYYGNDIVETQG 169

Query: 213 RELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTI 272
             +W  +  + LE AGP+FIK GQWA++R D+FP   C + S LHS +  H   Y+   I
Sbjct: 170 SLVWYRLFRKALELAGPSFIKLGQWASSRTDIFPHGFCNEFSNLHSNSKPHPTKYSISKI 229

Query: 273 ERAFGRRLSE---IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIV----------V 319
                    E   +F+ F+  P+  G+IAQVH   L   Y  ++   +           V
Sbjct: 230 CETLNIEEDEFNTVFEEFQSKPLGIGAIAQVHLGKLSQDYFLKEHDSLGLDFYQLSSSWV 289

Query: 320 AVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAA 379
           A+K+ HP     IRRD  I+   A   + +P ++WL L + V  F++ M  Q+DL  E+ 
Sbjct: 290 AIKIIHPNARSKIRRDLKIMENFANAINALPTMEWLSLPDEVYNFSILMNLQLDLRIESL 349

Query: 380 HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQG---ECVSRYVDELQGHERLKSAL 436
           +L +F  NF+    V FPK +  L +  VL E Y      +   +Y D ++  + L+  +
Sbjct: 350 NLDKFNQNFKNSIQVKFPKSIKELSNKDVLFEEYMDAMPMDTFLKYKDLIKDID-LRKKV 408

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV------------ 484
           + +   A L+ML++DNF+HAD+HPGN+++R  +    + +L  ++  +            
Sbjct: 409 SDVFIDAFLQMLVLDNFVHADLHPGNVMIRFIKTNRYETKLESTESEISDIMRNLKSSMK 468

Query: 485 -----IF-----------------LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
                IF                 +D G+  EL+  +RVN ++ F A+AR +G  A E  
Sbjct: 469 NDDTDIFVKNLSNALQSYAAQICLIDTGLVTELNSLNRVNFIDLFNALARFNGYKAGELM 528

Query: 523 LRLSKQ-QNCPNPKAFIEEVDE--------AFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
           +  SK  +   N + F  +V++         F       GDL      + Q+L  VR H 
Sbjct: 529 IERSKSPETAINKEIFAFKVEKLVSKVKQRTFTLGTVSIGDL------LDQMLGMVRAHH 582

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
           V ++G+  +V+V  L+LEG  R+LDP  ++ +
Sbjct: 583 VRLEGDFVSVIVAILLLEGIGRRLDPHLDLFE 614


>gi|321249420|ref|XP_003191450.1| mitochondrion protein [Cryptococcus gattii WM276]
 gi|317457917|gb|ADV19663.1| mitochondrion protein, putative [Cryptococcus gattii WM276]
          Length = 1175

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 156/520 (30%), Positives = 238/520 (45%), Gaps = 121/520 (23%)

Query: 178  LVECVILLMRALYLGVLFSPSIMMAP--FADSFGPQFREL----------------WLHV 219
            + E +    R  YL  LF+P I + P       G + R L                W   
Sbjct: 635  IFEPIGTFFRFFYLACLFAPVIFLTPMLLVGKPGKRHRSLIGRPISEEDQSWGAIWWYGF 694

Query: 220  VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
            +++ +E AGP+FIK GQWAA+R DLFP  LC+K+S+LHS    HS  YTKK +E AFG  
Sbjct: 695  LVKQMERAGPSFIKLGQWAASRADLFPAALCEKMSKLHSNGKPHSLGYTKKVMEAAFGMS 754

Query: 280  LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQ----------KVKPIVVAVKVRHPGVG 329
              +IF+ F++ P+  G+IAQV++A L  +                    VA+KV HP V 
Sbjct: 755  FDDIFEEFDDEPIGCGAIAQVYKAKLTPKILADTKLDGLPRSADSDTASVAIKVIHPRVS 814

Query: 330  ESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF- 388
            ++IRRD  I+++ A I +  P ++W  L E VQ F   M SQ+DL  EA++L +F++NF 
Sbjct: 815  KTIRRDIAIMSIFANIINAFPGMQWFSLPEEVQVFGEMMNSQLDLRVEASNLDKFLHNFD 874

Query: 389  RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML 448
            +R + V+FP P+                    R  D                   +L+ML
Sbjct: 875  KRGRRVTFPTPI--------------------RLSD--------GKKELEEEMKEVLEML 906

Query: 449  LVDNFIHADMHPGNILVR---------------------------------------VAQ 469
            L+DN+ H D+HPGNI+VR                                        A 
Sbjct: 907  LIDNWTHGDLHPGNIMVRFYKPTTTDYLSPLLHAFGKDPTPSTDESVASHDSLVHTLAAV 966

Query: 470  KKSSQKRLFR--------SKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
             K S+K L +         +P +IF+D G+   L K +R N ++ F+AVA  DG  A + 
Sbjct: 967  SKDSEKWLNKLDELHQEGYEPQLIFIDAGLVTSLDKKNRRNFLDLFQAVAEFDGYKAGKL 1026

Query: 522  TLRLSKQQNCPNPKAFIEEVDEAFAF----------WGTPEGDLVHPAECMQQLLEKVRR 571
             +     + C  P   I+E  E FA             T     +  ++ +  +L+ VR+
Sbjct: 1027 MI-----ERCRTPDFAIDE--ETFALKMQHIVLSVKSKTFSLAKIKISDILTDVLKAVRQ 1079

Query: 572  HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            H V ++G+    +++ L+LEG  R+LDP  ++  +   +L
Sbjct: 1080 HHVKMEGDFVNTVISILLLEGIGRQLDPDMDLFKSALPIL 1119


>gi|403417737|emb|CCM04437.1| predicted protein [Fibroporia radiculosa]
          Length = 705

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 222/480 (46%), Gaps = 93/480 (19%)

Query: 216 WLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           W   +   ++ AGP F+K  QWAA+R DLFP  LC++L  LHS+   H  +YTK  IE+ 
Sbjct: 178 WYGYLTSQMQRAGPTFVKLAQWAASRADLFPVLLCERLGALHSRGKAHPLSYTKHVIEKI 237

Query: 276 FGRRLSEIFDGFEEAPVASGSIAQVHRASLR-----------------------FRYPGQ 312
           F R  +E+F+ F+E P+ +G+IAQV++ +LR                          P  
Sbjct: 238 FQRPFNEVFEEFDETPIGTGAIAQVYKGTLRKDLIPPSHLTPKRSRKNVLPTALVNEPPP 297

Query: 313 KVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQV 372
            V    VA+K+ HP V + I RD  I++  A+  ++ P V+WL L E V  F   M  Q+
Sbjct: 298 SVPTAAVAIKILHPDVSKLIARDLAIMDFFARALTLFPGVQWLSLPEEVAVFGRMMQQQL 357

Query: 373 DLAREAAHLSRFIYNFR-RWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHER 431
           DL  EAA+L  F  NF  R   V+FP+P+       VLVE Y+    +  ++    G   
Sbjct: 358 DLRVEAANLEVFEKNFSGRKLPVTFPRPLTVWTSKEVLVEEYQNALSLELFLK--NGGGP 415

Query: 432 LKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQK-----KSSQKRLFRSK----- 481
               LA +G    L MLL+DNF+H+D+HPGNI+++  +      +++   +  S+     
Sbjct: 416 YDDLLAEVGLDTFLNMLLLDNFVHSDLHPGNIMIKFTKPTALSIRNTASAVLHSRGPTDP 475

Query: 482 ----------------------------------------PHVIFLDVGMTAELSKTDRV 501
                                                   P V+F+D G+   L + +R 
Sbjct: 476 EPLPAEDACSDRIVNHLRTLTDDPGTWRAELQSLHASGYVPEVVFVDAGLVTTLDEHNRT 535

Query: 502 NLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF----------WGTP 551
           N ++ F+AVA  DG  A    +     + C  P+  I+   E FA             T 
Sbjct: 536 NFLDLFRAVAEFDGYRAGTLMV-----ERCRTPELAIDP--ETFALRMQHIVLNVKRKTF 588

Query: 552 EGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
               +  ++ +  +L+ VR+H V ++ +    +++ L+LEG  R+LDPG ++  +   +L
Sbjct: 589 SLGQIKISDILTAVLKAVRQHHVKMEADFVNTVISILLLEGIGRQLDPGLDLFKSALPIL 648


>gi|402219855|gb|EJT99927.1| ABC1-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
          Length = 551

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/474 (30%), Positives = 223/474 (47%), Gaps = 95/474 (20%)

Query: 216 WLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           W  ++   ++ AGP F K  QWAA+R DLFP  LC+KL  LHS    HSF++T++ +ER 
Sbjct: 21  WYGLLTAQMQRAGPTFTKLAQWAASRKDLFPSLLCEKLGRLHSNGKPHSFSHTRRVVERV 80

Query: 276 FGRRLSEIFDGFEEAPVASGSIAQVHRASLRF----------RYPGQK------------ 313
           F     E+F+ F+  P+  G+IAQV++  L+           R+P ++            
Sbjct: 81  FRAPFDEVFESFDRTPIGCGAIAQVYKGRLKQSVLPPSYLNPRHPHERRFPPQFPPTSPP 140

Query: 314 ---VKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMS 370
                   VA+K+ HP V ++I RD  I++  A+  S+IP V+WL L E V+ F   M S
Sbjct: 141 PSSPPSAEVAIKILHPRVEKTINRDLRIMSFFARALSLIPGVQWLSLPEEVEVFGGMMRS 200

Query: 371 QVDLAREAAHLSRFIYNF-RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH 429
           Q+DL  EA++L RF  NF  R   + FP+PV       +LVE YE    +  ++    G 
Sbjct: 201 QLDLREEASNLRRFEKNFENRQSAIGFPRPVEEYSTRDILVEEYENALPLPAFLK--HGG 258

Query: 430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVR------------VAQK-----KS 472
                 LA++G  A L MLL+DNF+H D+HPGNI+V+            +  K     K 
Sbjct: 259 GPFDEQLANMGLDAFLNMLLLDNFVHTDLHPGNIMVKFYKPSTGFFFKLIGNKLFGTPKP 318

Query: 473 SQKRLFRSK---------------------------------PHVIFLDVGMTAELSKTD 499
           +++ LF                                    P +IF+D G+   LS T+
Sbjct: 319 NEEALFAESDAIVGRLKPLAQSDAPEGAWLSELNQLHEEGYLPELIFVDTGLVTTLSPTN 378

Query: 500 RVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF----------WG 549
           R N ++ F+A+A  DG  A +  +     + C  P   I+   E FA             
Sbjct: 379 RRNFLDLFQAIAVFDGYRAGQLMI-----ERCRTPDLAIDT--ETFALKMQHLILSVKSK 431

Query: 550 TPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           T     +  ++ + ++L  VR H V ++ +    +++ L+LEG  R+LD   ++
Sbjct: 432 TFSLAQIRISDVLSEVLTAVRTHHVKMEADFVNTVISILLLEGIGRQLDSNMDL 485


>gi|328773961|gb|EGF83998.1| hypothetical protein BATDEDRAFT_8800, partial [Batrachochytrium
           dendrobatidis JAM81]
          Length = 467

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/433 (32%), Positives = 214/433 (49%), Gaps = 73/433 (16%)

Query: 235 GQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVAS 294
           GQWA++R DLFP  LC  LS+L S    HS  +T   IE++FG  + ++F  F+  P+  
Sbjct: 2   GQWASSRSDLFPSFLCLALSKLQSNVQPHSMEHTINMIEKSFGASIDDLFIRFDHVPIGC 61

Query: 295 GSIAQVHRASLR------------------------FRYPGQKVKPIVVAVKVRHPGVGE 330
           GS+AQV+ A LR                            G + KP   AVKV HP V E
Sbjct: 62  GSVAQVYYAELRDPDQTSPAINQSDSSSLSSKVSDTVVTNGGRGKP--YAVKVLHPKVRE 119

Query: 331 SIRRDFVIINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFR 389
            I  D  I+ + A  I+ + P+ +WL L E V  F   M +Q+DL  EA++L  F  NF 
Sbjct: 120 LISLDLSIMAIGASLITFIFPSAEWLSLPEEVATFGSMMTAQLDLTNEASNLQVFQNNFN 179

Query: 390 RWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLL 449
            W  V FP P+   V P VLVE Y +   +++ ++   G  +    LA IG    LKML+
Sbjct: 180 SWGSVGFPSPIKQRVSPEVLVEDYIEAVPMTKVLEF--GGGQFDRELAKIGLTCFLKMLI 237

Query: 450 VDNFIHADMHPGNILVRVAQKKSSQKRL--------------------------FRSKPH 483
           +DNF+HADMHPGNI++   ++ +S+ +L                           ++K +
Sbjct: 238 LDNFVHADMHPGNIMMTFYKEAASKSKLEFIDSHYIQRLKKTTNETEWKAILSELKAKNY 297

Query: 484 VIFL---DVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKA---- 536
             FL   D G+ + LS+   VN ++ F+A++  +GR  +E  +  SK        A    
Sbjct: 298 APFLYIVDAGLISSLSQAHLVNFIDLFQAISEFNGRRISELMISRSKSPYTVIDAAGFQS 357

Query: 537 ----FIEEVDE-AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLE 591
               FI+EV E  FA       + +H A+ +  +L KVR H V ++G+   V V+ ++LE
Sbjct: 358 AMLQFIQEVKEQTFAL------ENIHVADILGFVLSKVRVHHVKIEGDFVNVAVSCMLLE 411

Query: 592 GWQRKLDPGYNVM 604
           G  ++LD   +++
Sbjct: 412 GMGQRLDASMDLL 424


>gi|443920670|gb|ELU40549.1| atypical/ABC1/ABC1-C protein kinase [Rhizoctonia solani AG-1 IA]
          Length = 801

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 153/534 (28%), Positives = 245/534 (45%), Gaps = 110/534 (20%)

Query: 168 HAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE--------LWLHV 219
           H F+ S ++   E +    R L+L  +F P I+  P      P+ R          W  +
Sbjct: 210 HEFLRSRIW---EPIRTGFRFLHLVTIFIPVILTTPILLIGSPEDRYGGDRWGAVWWYGL 266

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           +++ ++ AGP FIKW   A +R DLFP  LC+KL  LHS    H F++T++ IER FGR 
Sbjct: 267 LVKAMQRAGPTFIKW---AGSREDLFPAVLCEKLGSLHSNGKPHRFSHTRRVIERVFGRS 323

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLR--------------FRYPG-----QKVKPIVVA 320
             E+F+ FEE+P+  G+IAQV+RA+L+                 PG      +     VA
Sbjct: 324 FDEVFEAFEESPIGVGAIAQVYRATLKSDLHPFTTNSTSDSVDQPGTVPAFTQAPKTSVA 383

Query: 321 VKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAH 380
           +K+ HP V + I RD  I+++ A    +IP ++WL L + V+ F   M  Q+DL  EA +
Sbjct: 384 IKILHPHVRKHISRDLTILSVFASAIDMIPGLEWLSLPDEVRVFGEMMKQQIDLRHEARN 443

Query: 381 LSRFIYNFRR----------WKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHE 430
           L +F  NF R             V FP+P+       VLVE Y     +  ++    G  
Sbjct: 444 LVQFEQNFGRDGQGGKSGRVQTAVVFPRPLVNWSTDEVLVEEYADAVPLKYFLR--HGGG 501

Query: 431 RLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ---------------- 474
                +A++G  A L MLL+DNF+H+D+HPGNI+++  +  +                  
Sbjct: 502 PFDHRIANLGLDAFLNMLLLDNFVHSDLHPGNIMIKFYKPSTRDMFFTFFSSVLNKSGPP 561

Query: 475 ----------------KRLFRS----------------KPHVIFLDVGMTAELSKTDRVN 502
                           +RL  S                +P ++ LD G+   LS+ +R N
Sbjct: 562 LNKFAHAESDVIVAHLRRLSNSPDEWHQALDELEEDGYQPELVLLDAGLVTVLSEKNRRN 621

Query: 503 LVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF------WGTPEGDL- 555
            ++ F+A+A  DG  A +  +     Q C +P   I+   + FA        G       
Sbjct: 622 FLDLFRAIAEFDGYRAGQLMV-----QRCRSPHLAIDP--DVFALKIQHMVLGVKRKTFS 674

Query: 556 ---VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
              +  A+ +  +L  VR H V ++ +    +++ L+LEG  R+LDP  +++ +
Sbjct: 675 LGKIKIADVLYDVLRAVRTHHVRMEADFVNTVLSLLLLEGIGRQLDPDMDLLKS 728


>gi|392580066|gb|EIW73193.1| hypothetical protein TREMEDRAFT_67258 [Tremella mesenterica DSM 1558]
          Length = 1083

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 152/503 (30%), Positives = 254/503 (50%), Gaps = 58/503 (11%)

Query: 147  VSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFAD 206
            +SA  E  P+Q    + A+     + +    + E +  L+R  +L +LF P I+++P   
Sbjct: 546  ISASQE--PAQIVAASPAEPRLTLILAFQIYIFEPIATLVRFFHLALLFGPVILLSPMLV 603

Query: 207  SFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFA 266
            ++G  +   W   +++ +E AGP+FIK GQWAA+R DLFP  LC +LS+LHS    HS  
Sbjct: 604  NWGALW---WYSFLVKQMERAGPSFIKLGQWAASRADLFPSALCDRLSKLHSNGDPHSIR 660

Query: 267  YTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASL---------RFRYPGQKVKP- 316
            +T++ IE AFG R  +IF+ FE+ P+  G+IAQV+RA+L         R     Q+  P 
Sbjct: 661  HTRRVIEHAFGLRFDDIFETFEDKPIGCGAIAQVYRATLKPKVLPVSARKEVEAQRRDPE 720

Query: 317  ---------IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVF 367
                       VA+KV HP V + +RRD  I+++ A+I + +P ++W+ L E V  F   
Sbjct: 721  GENDDEQLSTSVAIKVLHPRVRKLVRRDIAIMSVFARIVNALPGMQWISLPEEVAVFGEM 780

Query: 368  MMSQVDLAREAAHLSRFIYNFR---RWKDVSFPKPVYPLVHPA-VLVETYE--QGECVSR 421
            M SQ+DL  EAA+L RF  NFR   R + +      +  +HP  ++V  Y+    + +S 
Sbjct: 781  MNSQLDLRVEAANLERFDANFRKRGRMEMLLLDNWTHGDLHPGNIMVRFYKPTSTDYLSP 840

Query: 422  YVDELQGHERLKS---ALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLF 478
             +D   G  R  S    + HI   +   + L+ +  H      N L  +A +  S     
Sbjct: 841  LIDRFTGSHRSPSPPPTIPHISKSSSELISLLSSQTHDRESWLNHLTALADQGYS----- 895

Query: 479  RSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFI 538
               P ++F+D G+   L+  +R + ++ F+AVA  DG  A +  +     + C  P+  I
Sbjct: 896  ---PQLVFIDAGLVTSLNDRNRKDFLDLFQAVAEFDGYRAGKLMV-----ERCRTPELVI 947

Query: 539  EEVDEAFAF----------WGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTL 588
            +E  E FA             T     +  ++ +  +L+ +R+H V ++G+    +++ L
Sbjct: 948  DE--ETFALKIQHIILSIKSKTFSLSRIKISDILTDVLKAIRQHHVKLEGDFVNTVISIL 1005

Query: 589  VLEGWQRKLDPGYNVMDTLQTLL 611
            +LEG  R+LDP  ++  +   +L
Sbjct: 1006 LLEGIGRQLDPDMDLFKSALPIL 1028


>gi|393912239|gb|EFO28477.2| atypical/ABC1/ABC1-C protein kinase [Loa loa]
          Length = 593

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 150/512 (29%), Positives = 245/512 (47%), Gaps = 59/512 (11%)

Query: 147 VSAETEYFPSQNAFYTRAQD-GHAFVTSVLY---SLVECVILLMRALYLGVLFSPSIMMA 202
           V  E  +  +     T + D  +  +  V+Y   + V  + +++R + L + F+P ++ +
Sbjct: 74  VGEENPWLVASTRIETTSNDYSYLSIRMVIYLYRTTVRAIKIMLRIVSLSLFFTPLLITS 133

Query: 203 PFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPE 262
           P A  F   F ELW   +L  ++ +GP FIK GQWA+TR D+F +  C ++S LH+K   
Sbjct: 134 PIA-YFWSSFGELWWRWLLWMVQRSGPTFIKLGQWASTRRDIFSKSFCDRMSVLHTKTTC 192

Query: 263 HSFAYTKKTIERAFGR-RLSEIFDGFEEAPVASGSIAQVHRASLR---------FRYPGQ 312
             +  ++  ++  FG  R  +     E   + SG IA+V++  L             P  
Sbjct: 193 RPWHRSQYALDHLFGSSRWKDFVVSVETDAIGSGCIAEVYKGILDVCTFEKITGIHLPFA 252

Query: 313 KVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISS-VIPAVKWLRLDESVQQFAVFMMSQ 371
           K + + +A+K    GV ESI  D  I+    ++   +IP + ++     + QF   +  Q
Sbjct: 253 KDRHVDIAIKTVKDGVRESIDIDLSIMQCVVRLMEMLIPRLSYINPVSCLNQFREVLELQ 312

Query: 372 VDLAREAAHLSRFIYNFRRWKD-VSFPKPVYPLVHPAVLVETYEQGECVSRYV--DELQG 428
           VDL  EA  L RF  NF   K  V FP+ +       V++ET+E G C+++ +  ++L  
Sbjct: 313 VDLRNEARALKRFGDNFDPKKTRVRFPEVI--CYSRGVIIETFENGLCINKLITDEQLME 370

Query: 429 HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKK--------------SSQ 474
              LK  +A IG  ALLKM+ VDNF+H D+HPGNIL+R   +               +  
Sbjct: 371 QNELKKKVALIGVRALLKMIFVDNFVHGDLHPGNILLRFDNRDQRPTNWFISFRTSINKL 430

Query: 475 KRLFRS---------------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARR 513
           K + RS                     +P ++ LD G+  E    +   L   F+AV  +
Sbjct: 431 KEILRSFTSMSYGIRISYDDYCRNESGEPTLVILDTGIALEQKPQNLQKLRLLFRAVVDK 490

Query: 514 DGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL--VHPAECMQQLLEKVRR 571
            GR   E  L  S +Q C +P+AF +EVD+        + +L  ++ +E + +L   V R
Sbjct: 491 RGRDVGELLLLHSPKQRCKDPEAFYDEVDQIVQI-ARSKSNLRRLNISEMLNELFSIVSR 549

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           H V +D +  TV++  +VLEG  R LDP  ++
Sbjct: 550 HEVALDPSFTTVVLAVIVLEGLGRSLDPDLDL 581


>gi|226288513|gb|EEH44025.1| ABC1 family protein [Paracoccidioides brasiliensis Pb18]
          Length = 717

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 155/524 (29%), Positives = 241/524 (45%), Gaps = 111/524 (21%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKW--- 234
           +VE V   +R  +L V+F P ++  P           +W+   +R+ +      + W   
Sbjct: 162 VVEPVATALRFFHLLVIFVPVLVTVPV----------IWIGPRVRSRDGERTGTLWWYGF 211

Query: 235 --GQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPV 292
             GQWAA+R D+FP +LC ++S LHS AP HS   TK+ I  AF     +IF+ F+E P+
Sbjct: 212 LLGQWAASRSDIFPPELCVQMSSLHSNAPAHSLNATKRIISNAFNMPFEDIFEEFDEKPL 271

Query: 293 ASGSIAQVHRASLRFRYPGQKV--------KPI------------------------VVA 320
             G+IAQV++A LR   PG  V        KP+                         VA
Sbjct: 272 GVGAIAQVYKAKLR---PGLVVHDQLDVEDKPLNIAAKFKKNVDTLVKISPRRVPSSYVA 328

Query: 321 VKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAH 380
           +KV HP V   +RRD  I+   A++ + IP+++W    + V+QF   M  Q+DL  EAA+
Sbjct: 329 IKVLHPRVQRIVRRDLKIMAFFARVINAIPSMEWFSFPDEVKQFGHMMRLQLDLRIEAAN 388

Query: 381 LSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIG 440
           L  F   F+      FP P        VLVE + QG  ++ +++   G    +  +A  G
Sbjct: 389 LQLFRERFKSRTTAWFPYPYTEYTTREVLVEEFAQGIPLAAFLE--SGGGVYQQGIAREG 446

Query: 441 THALLKMLLVDNFIHADMHPGNILVRVAQ-----------------KKSSQKRLFRS--- 480
             A L MLL+DNF+HAD+HPGNI+VR  +                 K+  Q  +  S   
Sbjct: 447 LDAFLHMLLIDNFVHADLHPGNIMVRFYKPGQLDLSFKTYRPSTPAKEKRQVDVTESVLN 506

Query: 481 ------------------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
                                   +P +IFLD G+  +L+  +R N ++ F+AVA  DG 
Sbjct: 507 RLRPYQKDPEKWNAVLSEIEKEGYRPQLIFLDTGLVTQLNSLNRRNFLDLFRAVAEFDGY 566

Query: 517 TAAECTLRLSKQQNCP-NPKAFIEEVD--------EAFAFWGTPEGDLVHPAECMQQLLE 567
            + +  +   +Q +   +P+ F  ++           FA      GD+      + Q+L 
Sbjct: 567 RSGQLMVERCRQPDAVIDPEIFALKMQHLVLAVKGRTFALGNVKIGDV------LSQVLY 620

Query: 568 KVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            VR H V ++G+   V+V+ L+LEG  R LDP  ++  +   +L
Sbjct: 621 LVRAHHVRLEGDFVNVVVSILLLEGIGRSLDPELDLFKSALPIL 664


>gi|255032496|gb|ACT99044.1| hypothetical protein DN1 [Lentinula edodes]
          Length = 701

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 151/530 (28%), Positives = 240/530 (45%), Gaps = 112/530 (21%)

Query: 180 ECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE--------LWLHVVLRTLETAGPAF 231
           E ++   R + L  +F P I+ +P      PQ +          W   + R +E+AGP F
Sbjct: 123 EPILTAKRFIALCFIFLPVILTSPMLLVGKPQKKSKRDGWGAIWWYGFLARRMESAGPTF 182

Query: 232 IKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAP 291
           IK  QWAA+R DLFP  LC+KL  LHS    HSF +TK+ IE+ F R   ++F+ F+E P
Sbjct: 183 IKLSQWAASRADLFPAYLCEKLGALHSHGKPHSFRHTKRVIEQVFQRPFKQVFEEFDEEP 242

Query: 292 VASGSIAQVHRASLR--------------------------FRYPGQKVKPIVVAVKVRH 325
           + +G+IAQV+RA+L+                             P   V    VA+KV H
Sbjct: 243 IGTGAIAQVYRATLKKDLLPPSYLGPRRHKKMPAAALNSVTLTNPPPSVPTAAVAIKVLH 302

Query: 326 PGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFI 385
           P V ++I RD  I++  A   ++ P ++WL L + V  F   M  Q+DL  EA +L  F 
Sbjct: 303 PRVAKTISRDLSIMSFFANFITLFPGMQWLSLPDEVDVFGQMMFQQLDLRHEAENLLTFE 362

Query: 386 YNF-RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL 444
            NF  R   V+FP+P+     P +LVE ++    +  ++    G       +A +G  A 
Sbjct: 363 SNFGSRNVPVNFPRPLQVWSTPHLLVEEFQNALPLETFLK--NGGGPYDEQVATVGLDAF 420

Query: 445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQ---KRLFRSKPHVIF-------LDVG-MTA 493
           L MLL+DNF+H+D+HPGNI+V+ ++  S++   K L+ S  H  F        D G +  
Sbjct: 421 LNMLLLDNFVHSDLHPGNIMVKFSKPASTRYLLKNLWTSITHSFFHKSPEDPPDRGIIVP 480

Query: 494 ELSKTDRV-----------------------------------------------NLVEF 506
           + S++D +                                               N ++ 
Sbjct: 481 DYSESDSIVERLRSMTHDRSAWLNELSSLHESGYIPEIVFIDAGLVTTLSAENRRNFLDL 540

Query: 507 FKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFW----------GTPEGDLV 556
           F+A+A  DG    +  +     + C +P+  IE   E FA             T     +
Sbjct: 541 FRALAHFDGYRTGQLMV-----ERCRSPELAIET--ETFALKMQHLVLSVKRKTFSLGQI 593

Query: 557 HPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
             ++ +  +L  VR H V ++G+    +++ L+LEG  R+LDP  ++  +
Sbjct: 594 KISDILTDVLRAVREHHVKMEGDFINTVISVLLLEGIGRQLDPNLDLFKS 643


>gi|358059752|dbj|GAA94521.1| hypothetical protein E5Q_01173 [Mixia osmundae IAM 14324]
          Length = 750

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 157/544 (28%), Positives = 240/544 (44%), Gaps = 129/544 (23%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPF--------------------------ADSFGPQ 211
           L E +    R LYLG+LF P I+ AP                           A     +
Sbjct: 152 LFEPISTTRRFLYLGLLFLPVILSAPILLLEWTDLGRGKALTRSGRRRAANRQAKGMTER 211

Query: 212 FRELWLH-VVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKK 270
              +W + +++  +E AGP FIK  QWA +R DLFP  LC     LHS    H+ ++TKK
Sbjct: 212 STTIWWYGLLVHQMERAGPTFIKLAQWAGSRRDLFPDTLCALFGRLHSGGKPHALSHTKK 271

Query: 271 TIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRY---------------PGQKVK 315
            +E AF R  +EIF  F+E P+  G++ Q ++ +L                   P QK+K
Sbjct: 272 ALEHAFQRPFAEIFSEFDENPMGIGAVGQAYKGTLNTDLLPAHYLGPKHQDVDGPTQKLK 331

Query: 316 ------------PIV----VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDE 359
                       P V    VA+KV HPGV + I RD  I+++ A + + +P ++WL   E
Sbjct: 332 RAIAPATEDSKPPAVPTTSVAIKVLHPGVRKMINRDLKIMSVLANMLNAVPGMEWLSFPE 391

Query: 360 SVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECV 419
            V+ F   M +Q+DL  EA +L  F +NFR  K VSFP+P+      +VLVE YE    +
Sbjct: 392 EVEVFGGMMRAQLDLRTEAQNLQTFEHNFRHRKTVSFPRPLTDYTSQSVLVEEYEDAVPL 451

Query: 420 SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFR 479
             ++ E  G       +A++G  A L MLL+DNF+H+D+HPGNI V+   +  S K   +
Sbjct: 452 KMFLRE--GGGPYDEKIANLGLDAFLNMLLIDNFVHSDLHPGNIFVKFYPR--STKGFLQ 507

Query: 480 SKPHVIF---------------LDVGM------------TAELSK--------------- 497
           S    +F               LD+               AEL K               
Sbjct: 508 SIWASLFDKEEPDPASAAGSESLDIAHRLRKLSHDHEQWAAELDKLNDQGYEPELVFIDT 567

Query: 498 --------TDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF-- 547
                    +R N ++ F+AVA  DG  A    +     + C  P   ++E  + FA   
Sbjct: 568 GLVTELNDVNRRNFIDLFRAVAEFDGHKAGVLMV-----ERCRAPDLVVDE--DTFALKM 620

Query: 548 --------WGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDP 599
                     T     +  ++ + Q+L  +R H V ++ +    +++ L+LEG  R+L+P
Sbjct: 621 QHLILSVKSQTFSLAKIKISDVLSQVLTNIREHHVKLEADFVNTVISILLLEGIGRQLNP 680

Query: 600 GYNV 603
             ++
Sbjct: 681 EMDL 684


>gi|307104205|gb|EFN52460.1| hypothetical protein CHLNCDRAFT_54390 [Chlorella variabilis]
          Length = 495

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/311 (44%), Positives = 180/311 (57%), Gaps = 29/311 (9%)

Query: 180 ECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAA 239
           E + +L+R L+L  LF P+I+ AP         R+ WL ++  TLE AGPAFIKWGQWAA
Sbjct: 177 EELAILLRGLFLWALFLPAILTAPVC-LLTDIHRDRWLALMRWTLEQAGPAFIKWGQWAA 235

Query: 240 TRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQ 299
           TRPDLFP+D+C  L+EL ++AP H +A T   ++ AFG  + E+F  FE  PVASGSIAQ
Sbjct: 236 TRPDLFPQDICTALAELQTRAPTHPYAATATAVQSAFGAPIPELFAEFEAVPVASGSIAQ 295

Query: 300 VHRASLRFR---YPGQKVK----PI----------VVAVKVRHPGVGESIRRDFVIINLA 342
           V+RA L  R     G + +    P+           VAVKVRHPGVG  + RD  ++   
Sbjct: 296 VYRAVLSERGAALAGTRTRGGLLPLRRERLFKPGGAVAVKVRHPGVGVLMDRDVTLMWRG 355

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP-VY 401
           A + + +P V    + ESV QF   +  Q+DL  EAAHL  F  NFR W  VSFP+P   
Sbjct: 356 AALLAALPLVGSPAIKESVMQFGAPLKEQLDLVTEAAHLDAFGKNFRYWTGVSFPQPAAA 415

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHA---DM 458
           PLV   VLVET+E+GE VS+Y   LQG E    A  H G   L+  L  D  I     ++
Sbjct: 416 PLVSSEVLVETFEEGELVSKY---LQGPE----ARYHHGAGGLVTKLNPDIRIMDTLREL 468

Query: 459 HPGNILVRVAQ 469
            P N  +R+++
Sbjct: 469 LPANWHLRLSK 479


>gi|344323308|gb|AEN14433.1| protein kinase [Lentinula edodes]
          Length = 706

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 152/530 (28%), Positives = 241/530 (45%), Gaps = 112/530 (21%)

Query: 180 ECVILLMRALYLGVLFSPSIMMAPFADSFGPQ--FRE------LWLHVVLRTLETAGPAF 231
           E ++   R + L  +F P I+ +P      PQ  F+        W   + R +E+AGP F
Sbjct: 123 EPILTAKRFIALCFIFLPVILTSPMLLVGKPQKKFKRDGWGAIWWYGFLARRMESAGPTF 182

Query: 232 IKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAP 291
           IK  QWAA+R DLFP  LC+KL  LHS    HSF +TK+ IE+ F R   ++F+ F+E P
Sbjct: 183 IKLSQWAASRADLFPAYLCEKLGALHSHGKPHSFRHTKRVIEQVFQRPFKQVFEEFDEEP 242

Query: 292 VASGSIAQVHRASLR--------------------------FRYPGQKVKPIVVAVKVRH 325
           + +G+IAQV+RA+L+                             P   V    VA+KV H
Sbjct: 243 IGTGAIAQVYRATLKKDLLPPSYLGPRRHKKMPAAALNSVTLTNPPPSVPTAAVAIKVLH 302

Query: 326 PGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFI 385
           P V ++I RD  I++  A   ++ P ++WL L + V  F   M  Q+DL  EA +L  F 
Sbjct: 303 PRVAKTISRDLSIMSFFANFITLFPGMQWLSLPDEVDVFGQMMFQQLDLRHEAENLLTFE 362

Query: 386 YNF-RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL 444
            NF  R   V+FP+P+     P +LVE ++    +  ++    G       +A +G  A 
Sbjct: 363 SNFGSRNVPVNFPRPLQVWSTPHLLVEEFQNALPLETFLK--NGGGPYDEQVATVGLDAF 420

Query: 445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQ---KRLFRSKPHVIF-------LDVG-MTA 493
           L MLL+DNF+H+D+HPGNI+V+ ++  S++   K L+ S  H  F        D G +  
Sbjct: 421 LNMLLLDNFVHSDLHPGNIMVKFSKPPSTRYLLKNLWTSITHSFFHKSPEDPPDRGIIVP 480

Query: 494 ELSKTDRV-----------------------------------------------NLVEF 506
           + S++D +                                               N ++ 
Sbjct: 481 DYSESDSIVERLRSMAHDRSAWLNELSSLHELGYIPEIVFIDAGLVTTLSAENRRNFLDL 540

Query: 507 FKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFW----------GTPEGDLV 556
           F+A+A  DG    +  +     + C +P+  IE   E FA             T     +
Sbjct: 541 FRALAHFDGYRTGQLMV-----ERCRSPELAIET--ETFALKMQHLVLSVKRKTFSLGQI 593

Query: 557 HPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
             ++ +  +L  VR H V ++G+    +++ L+LEG  R+LDP  ++  +
Sbjct: 594 KISDILTDVLRAVREHHVKMEGDFINTVISVLLLEGIGRQLDPNLDLFKS 643


>gi|363755094|ref|XP_003647762.1| hypothetical protein Ecym_7093 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356891798|gb|AET40945.1| hypothetical protein Ecym_7093 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 654

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/440 (31%), Positives = 212/440 (48%), Gaps = 57/440 (12%)

Query: 215 LWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIER 274
           +W  +V R LE AGP FIK GQWA +R D+F   LC +L  LHS A  HS  YTK+ I +
Sbjct: 159 IWYQIVRRALEFAGPTFIKLGQWAGSRTDIFAEGLCLELCNLHSNAKPHSLKYTKEQIVK 218

Query: 275 AFG-RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIV------VAVKVRHPG 327
           A G     +IF+ F+   +  G++AQV+   L  +   QK   +        AVKV HP 
Sbjct: 219 ALGVESFDDIFEEFDAKTLGCGAVAQVYVGKLTDKIIKQKQIHLGPDQNKWCAVKVVHPK 278

Query: 328 VGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYN 387
             + I RD  I+   A    ++P ++WL L   V+QF+V M  Q+DL  E  +L +F  N
Sbjct: 279 ATKQISRDLKIMKFFAVAIDMLPTMEWLSLPTEVEQFSVLMNLQLDLRIEVNNLRKFNEN 338

Query: 388 FRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRY--VDELQGHERLKSALAHIGTHALL 445
           F     V FP+    L    VL E Y  G  +  +  V +   +  L   ++     + L
Sbjct: 339 FEGDPCVKFPQGFPELTSRNVLFEEYIHGFPMEMFLKVKKYISNPGLCQKVSSPFIRSFL 398

Query: 446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSK------------------------ 481
           KM+++D+FIH+D+H GNI++R  +   S+K +  ++                        
Sbjct: 399 KMMILDDFIHSDLHAGNIMIRFLKTDKSEKHILSTEAEMFEVVNNLRRMHRDNDPKFIDT 458

Query: 482 ---------PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ-QNC 531
                    P + F+D G+  EL+  +RVN +  F A+A  +G  A E  +  S+  +  
Sbjct: 459 LRSVLTQYTPQICFIDTGLITELNDRNRVNFIALFNALALFNGYRAGELMIERSRTPETA 518

Query: 532 PNPKAFIEEVDE--------AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTV 583
            + + F  +V++         F       GDL+H      Q+L  VR H V ++G+  +V
Sbjct: 519 IDKELFAIKVEKLVNNVRKRTFTLGNVSIGDLLH------QMLTMVRSHHVRMEGDFVSV 572

Query: 584 MVTTLVLEGWQRKLDPGYNV 603
           +V  L+LEG  R+LDP  ++
Sbjct: 573 VVAILLLEGIGRQLDPDLDL 592


>gi|302507612|ref|XP_003015767.1| hypothetical protein ARB_06078 [Arthroderma benhamiae CBS 112371]
 gi|291179335|gb|EFE35122.1| hypothetical protein ARB_06078 [Arthroderma benhamiae CBS 112371]
          Length = 506

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 139/453 (30%), Positives = 213/453 (47%), Gaps = 89/453 (19%)

Query: 232 IKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEA 290
           ++ GQWAA+R D+FP +LC  +S LHS AP H    TK+TI RAF G    EIF+ F+E 
Sbjct: 1   MQLGQWAASRSDIFPPELCAMMSSLHSHAPAHPLHITKRTISRAFNGLPFDEIFEEFDEK 60

Query: 291 PVASGSIAQVHRASLRFRYPG---------------------------QKVKPIVVAVKV 323
           P+  G+IAQV++A LR    G                           + V    +A+KV
Sbjct: 61  PLGVGAIAQVYKAKLRPDLAGSLDRASKPTNLREKMRRNVNVLVKSTPESVPSSYIAIKV 120

Query: 324 RHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSR 383
            HP V  ++RRD  I+   A +   IP ++WL L + V++F   M  Q+DL  EAA+L+ 
Sbjct: 121 LHPNVDRTVRRDLRIMGFFATLIHWIPTMEWLSLPDEVEKFGEMMKLQLDLRIEAANLAF 180

Query: 384 FIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHA 443
           F  NF+      FP P        VLVE + QG  ++ +++   G    +  +A  G  A
Sbjct: 181 FRENFKSRTTARFPYPYTEYTTREVLVEEFAQGIPLAAFLE--NGGGVFQHDIAQEGLDA 238

Query: 444 LLKMLLVDNFIHADMHPGNILVRVAQ-------------------------KKSSQKRLF 478
            L MLL+DNF+H+D+HPGNI+VR  +                          +S   RL 
Sbjct: 239 FLHMLLIDNFVHSDLHPGNIMVRFYKPSQLDLSLSVQSPHGALVSESGNTATESVLSRLR 298

Query: 479 RS-------------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           +                    +P +IF+D G+  EL+  +R + ++ F+A+A  DG  A 
Sbjct: 299 KHRKDPKAWNETLKQIDAEGYRPQLIFIDTGLVTELNAVNRRDFLDLFRAIAEFDGYKAG 358

Query: 520 ECTLRLSKQQNCP-NPKAFIEEVDE--------AFAFWGTPEGDLVHPAECMQQLLEKVR 570
              +  S+Q +   + + F   +           FA      GD       +  +L  VR
Sbjct: 359 YLMIERSRQPDTVIDAEIFALRMQHLVLSIKGRTFALGNVKLGD------VLSDVLYMVR 412

Query: 571 RHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
            H V ++G+   V+++ L+LEG  R+LDP  ++
Sbjct: 413 NHHVRLEGDFINVVISALLLEGIGRRLDPDLDI 445


>gi|320165552|gb|EFW42451.1| aarF domain containing kinase 2 [Capsaspora owczarzaki ATCC 30864]
          Length = 716

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 117/316 (37%), Positives = 180/316 (56%), Gaps = 26/316 (8%)

Query: 167 GHA-----FVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQ------FREL 215
           GHA     F   +  +L+EC+++ +R   L   F+P + +AP    F P       +++ 
Sbjct: 126 GHARKPRTFFGKLYDTLLECILIPLRIFELAFRFAPVVFLAPLV--FLPSRYYVAGWQQW 183

Query: 216 WLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           W  +++ T+E+ GP FIK  QWA++R DLFP D+C +LS LH ++  HSFA T + I  A
Sbjct: 184 WWTLLVHTIESCGPTFIKLAQWASSRRDLFPADMCAQLSRLHGRSQPHSFARTAEVIRSA 243

Query: 276 FGRRLSEIFDGF---EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESI 332
              R + + D F   +  PV SG +AQVHRA L       K    VVA+KV HPG+   I
Sbjct: 244 LAERNATVEDAFSYIDPQPVGSGCVAQVHRAIL-------KADGSVVALKVLHPGIQRKI 296

Query: 333 RRDFVII-NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRW 391
            RD +I+   A  + +++P ++W+ L ESV+QF+  M+ Q+DL  E A+L +F  NF  +
Sbjct: 297 ERDMLILYACAVTMETLVPPLRWMSLVESVEQFSSLMLRQLDLRIEGANLIKFNRNFANY 356

Query: 392 KDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVD 451
           + + FP          +LVE+YE G  ++R++        L   L  +G  A LKM+++D
Sbjct: 357 RGIRFPTVFPEWTSERMLVESYEPGVSLNRFIRANDHPANLH--LGELGLRAFLKMMILD 414

Query: 452 NFIHADMHPGNILVRV 467
           NFIH D+HPGN+L ++
Sbjct: 415 NFIHGDLHPGNMLAQM 430



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 3/142 (2%)

Query: 483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL-RLSKQQNCPNPKAFIEEV 541
            ++ +D G+  ELS  DRVN ++ F AVAR  GR   E  + R   Q    + + FI  V
Sbjct: 530 QMLLIDAGIVTELSPVDRVNFIDLFTAVARGQGRAVGELMVDRARGQSENLDREGFISSV 589

Query: 542 DEAFAFWGTPEGDL--VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDP 599
           D            L  V  A+ + ++   V  + V ++ N  ++ V  +VLEG  R L+P
Sbjct: 590 DNLVTRVRVQTLALGKVRIADILSEMFSLVCMYGVKLESNFVSLAVCIMVLEGIGRCLNP 649

Query: 600 GYNVMDTLQTLLLKADWAKSLS 621
             +++D    +L   +  + L+
Sbjct: 650 EIDLLDAALPMLEAVEANRGLT 671


>gi|145545983|ref|XP_001458675.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124426496|emb|CAK91278.1| unnamed protein product [Paramecium tetraurelia]
          Length = 583

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 166/585 (28%), Positives = 272/585 (46%), Gaps = 85/585 (14%)

Query: 112 ISRIAQAFSLALTRSPLLVPGIIAFTSGQLA-----WAQRVSAETEYFPSQNAFYTRAQD 166
           +SR A  F   +T   L   G   F   Q A        +   E + F      Y R   
Sbjct: 12  LSRRATIFVGGMTCIGLYSAGYQRFKKAQYASLYENLELKQVIEIDLFKDYQQEYLR--- 68

Query: 167 GHAFVTSVLYS-LVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLE 225
           GH    +  +S ++    L +R L L + F+P ++  PFA  F     + WL +++++LE
Sbjct: 69  GHVHSVNGFWSRMIYYGKLQLRFLQLILTFTPLVVFFPFALLFKSWLYKHWLRLLIKSLE 128

Query: 226 TAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFD 285
            AGP ++K GQWA+ R D+F  ++  +LS+L   A  H++ YTKK  E  F +++ ++FD
Sbjct: 129 LAGPLWMKLGQWASHRGDVFGYEVTSELSKLRDSATPHNYYYTKKQFEEEFKQKIEDVFD 188

Query: 286 GFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKI 345
            F+  P+ASGSI Q+H A     Y       +  AVKVRHP + E +  D  I+ + + I
Sbjct: 189 SFDTNPIASGSIGQIHLA-----YKN----GVKYAVKVRHPRIVEKLELDLKILYVISNI 239

Query: 346 -SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV 404
            SS     + L +  + Q+F+V +M+Q DL+ EA +L  F   F+  K+V FPK +   V
Sbjct: 240 LSSTQQIFRRLAMPVTFQEFSVTLMNQADLSFEAKNLQIFEQKFKDSKNVIFPKILKEYV 299

Query: 405 HPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNIL 464
             +V+VET+E+G  +S ++   +  E      A++G  A  KML+ DNFIHAD+H GNIL
Sbjct: 300 SKSVIVETFEEGVSLSNFMKLERTREH--RVAANLGLKAFYKMLIYDNFIHADLHSGNIL 357

Query: 465 VRVAQKKSSQKRLFRSKPHVIFLD-VGMTAEL---------------------------- 495
           VR+    +S+   F++     F D V   AEL                            
Sbjct: 358 VRIKDNNTSKFDNFKNLLEEGFYDLVEYAAELIVPLFEKFILKKPLKVSILEKEKIFDEQ 417

Query: 496 --------SKTDRVNL------------------VEFFKAVARRDGRTAAEC-TLRLS-- 526
                   +  ++ NL                  + F K +     R   EC  L LS  
Sbjct: 418 QFWNFLRQTNQNQKNLDLIFIDPGMVTILNQNDRINFIKIIMFVALRQPKECGQLMLSLA 477

Query: 527 ---KQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTV 583
               Q      + F++++++ F          +      + +LE +R + + V+G+  T+
Sbjct: 478 SYNTQLKEEKKQKFLKDIEDLFGEVCNAPLSKMDLGSIFKGMLEILRSNGLAVEGHFATL 537

Query: 584 MVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYTIDGLM 628
           +   ++LEG  ++LDP  N++    + LL+    +++  TI+ LM
Sbjct: 538 LTNMMILEGIGKELDPKINIVSKAASFLLQ---IRTIDSTINELM 579


>gi|302309470|ref|NP_986888.2| AGR222Wp [Ashbya gossypii ATCC 10895]
 gi|299788374|gb|AAS54712.2| AGR222Wp [Ashbya gossypii ATCC 10895]
 gi|374110137|gb|AEY99042.1| FAGR222Wp [Ashbya gossypii FDAG1]
          Length = 645

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 150/490 (30%), Positives = 233/490 (47%), Gaps = 69/490 (14%)

Query: 177 SLVECVILLMRALYLGVLFSPSIMMAPF--------ADSFGP----QFRELWLHVVLRTL 224
           ++VE V  ++R L L  +F P ++  P         A S G     Q   LW  +V + L
Sbjct: 100 AVVEPVRTVLRLLQLSAVFVPVLLAFPVTLVGRTVRAGSHGERSETQGALLWYRLVRKAL 159

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSEI 283
           E AGP+FIK GQWA +R D+F   LC +L  LHS A  H   YTK+ I  A G +   E+
Sbjct: 160 EWAGPSFIKLGQWAGSRTDIFSEGLCAELGRLHSSAKPHGLQYTKRAIVEALGVQSFEEV 219

Query: 284 FDGFEEAPVASGSIAQVHRASLR---FRYPGQKVKPIV---VAVKVRHPGVGESIRRDFV 337
           F+ F E P+  G+IAQV+   LR    R  G  + P      AVKV HP     I RD  
Sbjct: 220 FEEFREQPLGCGAIAQVYVGKLREELVRAKGVDLGPGGNRWCAVKVVHPHAARQISRDLR 279

Query: 338 IINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP 397
           ++   A     +P ++WL L   V+QF++ M  Q+D+  E  +L++F  NFR    + FP
Sbjct: 280 LMRFFAAAVDALPTMEWLSLPAEVEQFSILMNIQLDMRIECNNLAKFNDNFRGHTQIRFP 339

Query: 398 KPVYPLVHPAVLVETYEQGECVSRY--VDELQGHERLKSALAHIGTHALLKMLLVDNFIH 455
           +    L   +VL E Y  G  +  +  V    G   L   ++     + LKM+++D+FIH
Sbjct: 340 RGFVELTSRSVLFEEYIDGFPMEAFLKVKNRIGDTSLCQKVSEPFISSFLKMMILDDFIH 399

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSK---------------------------------P 482
           +D+H GN+++R  +    ++ +   +                                 P
Sbjct: 400 SDLHAGNVMLRFVRTDKLERHILSPEDETSDVVRRLVGMHRDHDPGFDVALREVLRDYTP 459

Query: 483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ-QNCPNPKAFIEEV 541
            + F+D G+  EL++ +R N +  F A+A+ +GR A E  +  S+  +   +  AF  +V
Sbjct: 460 QICFIDTGLITELNERNRTNFIALFNALAQFNGRRAGELMIERSRTPETAVDKDAFALKV 519

Query: 542 D--------EAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGW 593
           D          F       GDL      ++Q+L  VR H V ++G+  +V+V  L+LEG 
Sbjct: 520 DRLVKTVKQRTFTLGTVSIGDL------LEQMLSMVRTHHVRMEGDFVSVVVAILLLEGI 573

Query: 594 QRKLDPGYNV 603
            R+LDP  ++
Sbjct: 574 GRQLDPELDL 583


>gi|47206282|emb|CAF94515.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 508

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 148/484 (30%), Positives = 217/484 (44%), Gaps = 103/484 (21%)

Query: 216 WLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           WL  +L   ET+GP FIK GQWA+TR D+F  + C + S LH K   HS+++TK+ ++RA
Sbjct: 37  WLDALLWVTETSGPTFIKLGQWASTRRDIFSPEFCDRFSRLHVKVRPHSWSHTKQCLQRA 96

Query: 276 FGR--RLSEIFDGFE--------------------EAPVASGSIAQVHRASL--RFRYPG 311
           FG   R   +FD  E                    E P     + ++ +  L   +  PG
Sbjct: 97  FGEGWRRVLVFDSKEPVGSGCMAQVYRGWAKADQIEDPAFQSLLKEMDKEDLLEAWEIPG 156

Query: 312 QKVKP------------------------------------IVVAVKVRHPGVGESIRRD 335
               P                                    I VA+KV HPGV   +  D
Sbjct: 157 LGALPRPLWRFWKGKKTEEVSQQQKCPKVASEENSAEKSHLIPVAIKVIHPGVKRQVEMD 216

Query: 336 FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS 395
            +++ +   +   +P +KWL L E V++F   M  Q+DL  EA ++ RF  NFR    V 
Sbjct: 217 LLLMKMGGWLLHCLPGLKWLSLFEIVEEFEKLMTKQIDLRFEAHNIERFRENFRNVDYVK 276

Query: 396 FPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIH 455
           FP P+ P V   VLVET+E+ E +S Y+   +    +K  +A +G   +LKM+ VDNF+H
Sbjct: 277 FPTPLQPFVTRTVLVETFEESEPISNYLCS-EIPMDVKQRIARMGVETMLKMVFVDNFVH 335

Query: 456 ADMHPGNILVRV---AQKKSSQKRL--------------------FRSKP---HVIFLDV 489
            D+HPGNILV+    +Q  S    L                     R  P    ++ LD 
Sbjct: 336 GDLHPGNILVQTLGKSQDSSDSGNLSAEAHGKTTLTDLWDTVVVSVRPNPCPLRLVLLDA 395

Query: 490 GMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWG 549
           G+ A+LS+ D  NL   F AV    G   AE  L  ++   C +   F +E+ E      
Sbjct: 396 GIVAQLSENDLANLKAVFTAVMMCQGERVAELLLHHARANECQDIPQFKKEMAE------ 449

Query: 550 TPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQT 609
                LV  A     L   V   +V ++ N  +++   +VLEG  R LDP  +++D  + 
Sbjct: 450 -----LVDHA-----LRNTVSLGKVKLESNFASIVFAIMVLEGLGRSLDPNLDILDLAKP 499

Query: 610 LLLK 613
           +LLK
Sbjct: 500 ILLK 503


>gi|296818155|ref|XP_002849414.1| mitochondrial protein [Arthroderma otae CBS 113480]
 gi|238839867|gb|EEQ29529.1| mitochondrial protein [Arthroderma otae CBS 113480]
          Length = 699

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 152/499 (30%), Positives = 228/499 (45%), Gaps = 106/499 (21%)

Query: 180 ECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAA 239
           E +    R ++L VLF P I   P    FG + ++   H             I+ GQWAA
Sbjct: 182 EVIATGFRFVHLVVLFIPVIASVPII-FFGSRVKDRDNH------RRGALLCIQLGQWAA 234

Query: 240 TRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAPVASGSIA 298
           +R D+FP +LC  +S LHS AP H    TKKTI RAF G    EIF+ F+E P+  G+IA
Sbjct: 235 SRSDIFPPELCALMSSLHSHAPAHPLHITKKTISRAFNGLPFDEIFEEFDEKPLGVGAIA 294

Query: 299 QVHRASLRFRYPG---QKVKPI------------------------VVAVKVRHPGVGES 331
           QV++A LR    G   +  KP+                         +A+KV HP V  +
Sbjct: 295 QVYKAKLRPDLAGSLDRASKPVNLREKMRKNVNVLVKSTPESVPSSYIAIKVLHPNVDRT 354

Query: 332 IRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRW 391
           +RRD  I+   A +   IP ++WL L + V++F   M  Q+DL  EAA+L+ F  NF   
Sbjct: 355 VRRDLRIMGFFATLIHWIPTMEWLSLPDEVEKFGEMMKLQLDLRIEAANLTFFRENFESR 414

Query: 392 KDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVD 451
               FP P        VLVE + QG  ++ +++   G    +  +AH G  A L MLL+D
Sbjct: 415 TTARFPYPYTEYTTREVLVEEFAQGIPLAAFLE--NGGGVFQHDIAHEGLDAFLHMLLID 472

Query: 452 NFIHADMHPGNILVRVAQKKS-----SQKRLFRS-------------------------- 480
           NF+H+D+HPGNI+VR  +        S +R  R+                          
Sbjct: 473 NFVHSDLHPGNIMVRFYKPSQLDLSLSVQRAHRALASESGNSATESVLARLRKHRKDPIA 532

Query: 481 -------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSK 527
                        +P ++F+D G+  EL+  +R + ++ F+A+A  DG  A    +  S+
Sbjct: 533 WNETLNQIDAEGYRPQLVFIDTGLVTELNAVNRRDFLDLFRAIAEFDGYKAGYLMIERSR 592

Query: 528 QQNCPNPKAFIE-EV-------------DEAFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
           Q     P + I+ E+                FA      GD+      +  +L  VR H 
Sbjct: 593 Q-----PDSVIDAEIFALRMQHLVLSIKGRTFALGNVKLGDV------LSDVLYMVRNHH 641

Query: 574 VNVDGNVCTVMVTTLVLEG 592
           V ++G+   V+++ L+LEG
Sbjct: 642 VRLEGDFINVVISALLLEG 660


>gi|324508560|gb|ADY43614.1| AarF domain-containing protein kinase 2 [Ascaris suum]
          Length = 609

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 233/489 (47%), Gaps = 67/489 (13%)

Query: 184 LLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPD 243
           L +R   L V F+P  +  P       + R LW    L T++ +GP  +K GQWA+TR D
Sbjct: 124 LTVRITTLSVRFAPLGLTCPLVLC-SDRIRRLWWSFALWTIQKSGPTLVKLGQWASTRRD 182

Query: 244 LFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF--GRRLSEIFDGFEEAPVASGSIAQVH 301
           +F +D C K++ LH+K    S+    ++   A   G   S      +  P+ SG IAQV+
Sbjct: 183 IFSKDFCDKMAVLHTKTTHRSWGRASRSALDALFPGIDWSSFIVAIQSDPIGSGCIAQVY 242

Query: 302 RA-----------SLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVI- 349
           +A            ++F +P  K K + VA+KV   GV ESI  D  I+    +++ +I 
Sbjct: 243 KAKVDLDKFYAATGIKFAHPEGK-KILDVAIKVAERGVRESIEIDLSILRCCTRLAEMIA 301

Query: 350 PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLV---HP 406
           P++ ++     + QF   +  QVDL  EA  L RF  NF    DV      +PLV     
Sbjct: 302 PSLLFVNPISCLDQFETVLKRQVDLRNEANALKRFSRNF----DVDKTGIRFPLVLCFSK 357

Query: 407 AVLVETYEQGECVSRYVD---ELQGHE--RLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
            V++ET+E+G  V+R V    E+  H+   +K  +A +G  ALLKM+ VDNF+H D+HPG
Sbjct: 358 DVIIETFEEGMYVNRLVTGDHEILAHQAASVKRRVALMGARALLKMIFVDNFVHGDLHPG 417

Query: 462 NILVRVAQKKSSQKRLFRS------------------------------------KPHVI 485
           NIL+R   + +    + R+                                    +P ++
Sbjct: 418 NILIRFNDRHNGLNDVHRAPETGSLFLKMVDSVKETVGWVHEPRIRFTENLEYNDEPTLV 477

Query: 486 FLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAF 545
            LD G+  E +  +  NL   F+AV  + G    +  L  + Q  C +P+ F  E++   
Sbjct: 478 ILDTGIAVEETPDNLKNLRALFRAVVEKRGYDVGQLLLDHAPQHRCKDPEQFCSEIENVV 537

Query: 546 AFWGTPEGDL--VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
                 +G L  ++ +E + +L   V RH+V+++ +  TV++  +VLEG+ R LDP  ++
Sbjct: 538 RI-ARSKGSLRTLNISEMLNELFSIVSRHQVSLETSFTTVVIAVMVLEGFGRSLDPDLDL 596

Query: 604 MDTLQTLLL 612
               +  LL
Sbjct: 597 FQCARPYLL 605


>gi|71425101|ref|XP_813008.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70877851|gb|EAN91157.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 665

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 141/447 (31%), Positives = 220/447 (49%), Gaps = 78/447 (17%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIER--------- 274
           L   GP++IK+GQW ATRPD FP  LC  L +L+ +   HS+++T+K + R         
Sbjct: 148 LTAMGPSYIKFGQWMATRPDFFPPTLCAALEKLYDQTSAHSWSHTEKVLRRTLHEATPSD 207

Query: 275 -------------------------AFGRRLSEIF--DGFEEAPVASGSIAQVHRASLRF 307
                                    A  +R + ++     E  PV SGSIAQ+HR  LR 
Sbjct: 208 GLIEDNGMTSLPDVVETTKTSRKQVAMKQRHNALYYLQEIETVPVNSGSIAQIHRGVLRE 267

Query: 308 RYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVI-PAVKWLRLDESVQQFAV 366
              G       +A+KV HP + E I  D   +     I + + P+  +  L  SVQ+F+ 
Sbjct: 268 EVDGIPAG-TEMAIKVTHPRIREHIAADVTGMRWFVNILTFLWPSTVYFDLKRSVQEFSS 326

Query: 367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDEL 426
           F+ SQ+DL +E  +L +FI+NFR +  V FP+P+  L    VL+ET+E+GE        L
Sbjct: 327 FVQSQLDLRQECDNLQQFIFNFRDFPGVIFPRPLPSLCSQDVLIETFEEGE-------PL 379

Query: 427 QGHERLKS--ALAHIGTHALLKMLLVDNFIHADMHPGNILVRV----------------- 467
           QG +  ++   LA  G H  LKML  DNF+H+D+HPGN+L+R                  
Sbjct: 380 QGIQSGENYYDLAERGCHMFLKMLFEDNFVHSDLHPGNLLLRTNPGAPVSSVSASLLLPS 439

Query: 468 --AQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL-R 524
             A     + +L      ++ LD G+ + LSK +R N +  F AVA  DG+ A++  + R
Sbjct: 440 SDAYYPDGKMKLLH---ELVVLDTGLVSTLSKKERNNFIALFAAVACGDGKLASDLMIDR 496

Query: 525 LSKQ---QNCPNPKAFIEEVDEAFAFW--GTPEG---DLVHPAECMQQLLEKVRRHRVNV 576
           + KQ   Q+    + F +++   F     G  EG     V     + +++  VR ++  +
Sbjct: 497 MPKQRRPQSGVKREKFRDDMQAIFDIVPPGKSEGFKLSKVRIGPVLAKIMNTVRENKTPI 556

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           DGN  ++++T +V EG  R+L P +N+
Sbjct: 557 DGNFASLVLTVIVGEGLGRRLAPDFNI 583


>gi|225681387|gb|EEH19671.1| ABC1 family protein [Paracoccidioides brasiliensis Pb03]
          Length = 687

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 143/462 (30%), Positives = 217/462 (46%), Gaps = 96/462 (20%)

Query: 235 GQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVAS 294
           GQWAA+R D+FP +LC ++S LHS AP HS   TK+ I  AF     +IF+ F+E P+  
Sbjct: 184 GQWAASRSDIFPPELCVQMSSLHSNAPAHSLNATKRIISNAFNMPFEDIFEEFDEKPLGV 243

Query: 295 GSIAQVHRASLRFRYPGQKV--------KPI------------------------VVAVK 322
           G+IAQV++A LR   PG  V        KP+                         VA+K
Sbjct: 244 GAIAQVYKAKLR---PGLVVHDQLDVEDKPLNIAAKFKKNVDTLVKISPRRVPSSYVAIK 300

Query: 323 VRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLS 382
           V HP V   +RRD  I+   A++ + IP+++W    + V+QF   M  Q+DL  EAA+L 
Sbjct: 301 VLHPRVQRIVRRDLKIMAFFARVINAIPSMEWFSFPDEVKQFGHMMRLQLDLRIEAANLQ 360

Query: 383 RFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTH 442
            F   F+      FP P        VLVE + QG  ++ +++   G    +  +A  G  
Sbjct: 361 LFRERFKSRTTAWFPYPYTEYTTREVLVEEFAQGIPLAAFLE--SGGGVYQQGIAREGLD 418

Query: 443 ALLKMLLVDNFIHADMHPGNILVRVAQ-----------------KKSSQKRLFRS----- 480
           A L MLL+DNF+HAD+HPGNI+VR  +                 K+  Q  +  S     
Sbjct: 419 AFLHMLLIDNFVHADLHPGNIMVRFYKPGQLDLSFKTYRPSTPAKEKCQVDVTESVLNRL 478

Query: 481 ----------------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
                                 +P +IFLD G+  +L+  +R N ++ F+AVA  DG  +
Sbjct: 479 RPYQKDPEKWNAVLSEIEKEGYRPQLIFLDTGLVTQLNSLNRRNFLDLFRAVAEFDGYRS 538

Query: 519 AECTLRLSKQQNCP-NPKAFIEEVDE--------AFAFWGTPEGDLVHPAECMQQLLEKV 569
            +  +   +Q +   +P+ F  ++           FA      GD+      + Q+L  V
Sbjct: 539 GQLMVERCRQPDAVIDPEIFALKMQHLVLAVKGRTFALGNVKIGDV------LSQVLYLV 592

Query: 570 RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           R H V ++G+   V+V+ L+LEG  R LDP  ++  +   +L
Sbjct: 593 RAHHVRLEGDFVNVVVSILLLEGIGRSLDPELDLFKSALPIL 634


>gi|407410145|gb|EKF32694.1| hypothetical protein MOQ_003450 [Trypanosoma cruzi marinkellei]
          Length = 477

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/392 (33%), Positives = 202/392 (51%), Gaps = 24/392 (6%)

Query: 216 WLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           WL ++LR ++ AGPAF+K GQW+ TR D+F  +       L+++   H ++ + + +   
Sbjct: 47  WLELLLRAVQRAGPAFVKAGQWSCTRHDIFSPEFRSVFKRLYNEVDVHPYSVSLQVLREE 106

Query: 276 FGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD 335
           F +   E+F   E  PV SGSI QVH A+L  R  G+K     V VKV HP + E+I +D
Sbjct: 107 FQKEPLEVFSHIESTPVGSGSIGQVHLATL--RETGEK-----VVVKVMHPNIVETILKD 159

Query: 336 FVIINLAAKI-SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV 394
           F I   AA+I     P+++   L      +   + +Q+D   EA HLS F  NFR    V
Sbjct: 160 FCIAIHAARILDKCFPSLEMYELPALAHAWRNHLSAQLDFRLEAKHLSIFRENFRHESFV 219

Query: 395 SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG--HERLKSALAHIGTHALLKMLLVDN 452
            FPKP++      VLVET+ +GE  S    E  G   E ++  LAH G +   KMLL D+
Sbjct: 220 DFPKPLFSTRR--VLVETFCKGELAS---PEFLGAQEEHVRDILAHKGLNTWCKMLLHDS 274

Query: 453 FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR 512
           F+H DMHPGNIL+ ++             P V  +DVG+   ++  + V   +  ++  R
Sbjct: 275 FVHGDMHPGNILIDISDPHD---------PRVSLIDVGLCQHITPEEAVVTHDLMESFVR 325

Query: 513 RDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRH 572
                     LR+SK+Q   N + F +EV+  F  W   +      +  +Q + E +R +
Sbjct: 326 WKADFCCSSLLRMSKEQKFVNKEKFEKEVEWLFDHWRPKKSSDCAVSNILQSIFECIREN 385

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
           RV +D    +++ + LVLE +   L+P +N++
Sbjct: 386 RVQMDPPYVSLLFSVLVLESFIMNLNPEFNMV 417


>gi|71410680|ref|XP_807623.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70871664|gb|EAN85772.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 477

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/390 (33%), Positives = 200/390 (51%), Gaps = 20/390 (5%)

Query: 216 WLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           WL ++LR ++ AGPAF+K GQW+ TR D+F  +       L+++   H ++ + + +   
Sbjct: 47  WLELLLRAVKRAGPAFVKAGQWSCTRHDIFSPEFRSVFRRLYNEVDVHPYSVSLQVLREE 106

Query: 276 FGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD 335
           F +   E+F   E  PV SGSI QVH A+L  R  G+K     V VKV HP + E+I +D
Sbjct: 107 FQKEPLELFSHIETTPVGSGSIGQVHLATL--RETGEK-----VVVKVMHPNIVETILKD 159

Query: 336 FVIINLAAKI-SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV 394
           F I    A+I     P+++  +L      +   + +Q+D   EA HLS F  NFR    V
Sbjct: 160 FCIAMQVARILDKCFPSLEMYKLPALAHAWRNHLSAQLDFRLEAKHLSIFRENFRHEPFV 219

Query: 395 SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFI 454
            FP+P++      VLVET+ +GE  S      Q  E ++  LAH G +   KMLL DNF+
Sbjct: 220 DFPRPLFSTRR--VLVETFCKGELASPEFLSAQ-EEHVRDILAHKGLNTWCKMLLHDNFV 276

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           H DMHPGNILV ++             P V  +DVG+   ++  + V   +  ++  R  
Sbjct: 277 HGDMHPGNILVDISDPHD---------PRVSLIDVGLCQHITPEEAVVTHDLMESFVRWK 327

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRV 574
                   LR+SK Q   N K F +EV+  F  W   +      +  +Q + E +R +RV
Sbjct: 328 ADFCCSSLLRMSKTQKFVNRKKFEKEVEWLFEHWRPKKSSDFAVSNILQSIFECIRENRV 387

Query: 575 NVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
            +D    +++ + LVLE +   L+P +N++
Sbjct: 388 QMDPPFVSLLFSVLVLESFIMNLNPEFNMV 417


>gi|71405958|ref|XP_805555.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70869010|gb|EAN83704.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 665

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/447 (31%), Positives = 218/447 (48%), Gaps = 78/447 (17%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIER--------- 274
           L   GP++IK+GQW ATRPD FP  LC  L +L+ +   HS+++T+K + R         
Sbjct: 148 LTAMGPSYIKFGQWMATRPDFFPPTLCTALEKLYDQTSAHSWSHTEKVLRRTLHEATPSD 207

Query: 275 -------------------------AFGRRLSEIF--DGFEEAPVASGSIAQVHRASLRF 307
                                    A  +R + ++     E  PV SGSIAQ+HR  LR 
Sbjct: 208 GLIEDNGMTSLPDVVETTKTRCKQVAMKQRHNALYYLQEIETVPVNSGSIAQIHRGVLRE 267

Query: 308 RYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVI-PAVKWLRLDESVQQFAV 366
              G       +A+KV HP + E I  D   +     I + + P+  +  L  SVQ+F+ 
Sbjct: 268 EVDGIPAG-TEMAIKVTHPRIREHIAADVTGMRWFVNILTFLWPSTVYFDLKRSVQEFSS 326

Query: 367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDEL 426
           F+ SQ+DL +E  +L +FI+NFR +  V FP+P+  L    VL+ET+E+GE        L
Sbjct: 327 FVQSQLDLRQECDNLQQFIFNFRDFPGVIFPRPLPSLCSQDVLIETFEEGE-------PL 379

Query: 427 QGHERLKS--ALAHIGTHALLKMLLVDNFIHADMHPGNILVRV----------------- 467
           QG +   +   LA  G H  LKML  DNF+H+D+HPGN+L+R                  
Sbjct: 380 QGIQSGDNYYDLAERGCHMFLKMLFEDNFVHSDLHPGNLLLRTNPGAPVSSVSASLLLPS 439

Query: 468 --AQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL-R 524
             A     + +L      ++ LD G+ + LSK +R N +  F AVA  DG+ A++  + R
Sbjct: 440 ADAYYPDGKMKLLH---ELVVLDTGLVSTLSKKERNNFIALFAAVACGDGKLASDLMIDR 496

Query: 525 LSKQ---QNCPNPKAFIEEVDEAFAFW--GTPEG---DLVHPAECMQQLLEKVRRHRVNV 576
           + KQ   Q+    + F  ++   F     G  EG     V     + +++  VR ++  +
Sbjct: 497 MPKQRRPQSGVKREKFRNDMQAIFDIVPPGKSEGFKLSKVRIGPVLAKIMNTVRENKTPI 556

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           DGN  ++++T +V EG  R+L P +N+
Sbjct: 557 DGNFASLVLTVIVGEGLGRRLAPDFNI 583


>gi|407849582|gb|EKG04283.1| hypothetical protein TCSYLVIO_004659 [Trypanosoma cruzi]
          Length = 477

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/390 (33%), Positives = 200/390 (51%), Gaps = 20/390 (5%)

Query: 216 WLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           WL ++LR ++ AGPAF+K GQW+ TR D+F  +       L+++   H ++ + + +   
Sbjct: 47  WLELLLRAVKRAGPAFVKAGQWSCTRQDIFSPEFRSVFRRLYNEVDVHPYSVSLQVLREE 106

Query: 276 FGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD 335
           F +   E+F   E  PV SGSI QVH A+L  R  G+K     V VKV HP + E+I +D
Sbjct: 107 FQKEPLELFSHIEATPVGSGSIGQVHLATL--RETGEK-----VVVKVMHPNIVETILKD 159

Query: 336 FVIINLAAKI-SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV 394
           F I    A+I     P+++  +L      +   + +Q+D   EA HLS F  NFR    V
Sbjct: 160 FCIAMQVARILDKCFPSLEMYKLPALAHAWRNHLSAQLDFRLEAKHLSIFRENFRHEPFV 219

Query: 395 SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFI 454
            FP+P++      VLVET+ +GE  S      Q  E ++  LAH G +   KMLL DNF+
Sbjct: 220 DFPRPLFSTRR--VLVETFCKGELASPEFLSAQ-EEHVRDILAHKGLNTWCKMLLHDNFV 276

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           H DMHPGNILV ++             P V  +DVG+   ++  + V   +  ++  R  
Sbjct: 277 HGDMHPGNILVDISDPHD---------PRVSLIDVGLCQHITPEEAVVTHDLMESFVRWK 327

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRV 574
                   LR+SK Q   N + F +EV+  F  W   +      +  +Q + E +R +RV
Sbjct: 328 ADFCCSSLLRMSKTQKFVNKEKFEKEVEWLFEHWRPKKSSDFAVSNILQSIFECIRENRV 387

Query: 575 NVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
            +D    +++ + LVLE +   L+P +N++
Sbjct: 388 QMDPPFVSLLFSVLVLESFIMNLNPEFNMV 417


>gi|407393664|gb|EKF26691.1| hypothetical protein MOQ_009608 [Trypanosoma cruzi marinkellei]
          Length = 723

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 141/447 (31%), Positives = 217/447 (48%), Gaps = 78/447 (17%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGR----- 278
           L   GP++IK+GQW ATRPD FP +LC  L +L+ +   HS+++T+K + R         
Sbjct: 206 LTAMGPSYIKFGQWMATRPDFFPPNLCAALEKLYDQTSAHSWSHTEKVLRRTLHEATPSD 265

Query: 279 ---------RLSEI----------------------FDGFEEAPVASGSIAQVHRASLRF 307
                     L ++                      F   E  PV SGSIAQ+HR  LR 
Sbjct: 266 GVIKDNGMTSLMDVVETTNTKRKQAARKQQHNALYYFQEIETVPVNSGSIAQIHRGVLRE 325

Query: 308 RYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVI-PAVKWLRLDESVQQFAV 366
              G       +A+KV HP + E I  D   +     I + I P+  +  L  SVQ+F+ 
Sbjct: 326 EVDGIPAG-TEMAIKVTHPRIREHIAADVTGMRWFVNILTFIWPSTVYFDLKRSVQEFSS 384

Query: 367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDEL 426
           F+ SQ+DL +E  +L +FI+NFR +  V FP+P+  L    VL+ET+E+GE        L
Sbjct: 385 FVQSQLDLRQECDNLQQFIFNFRDFPGVIFPRPLPSLCSQDVLIETFEEGE-------PL 437

Query: 427 QGHERLKS--ALAHIGTHALLKMLLVDNFIHADMHPGNILVRV----------------- 467
           QG +   +   LA  G H  LKML  DNF+H+D+HPGN+L+R                  
Sbjct: 438 QGIQSGDNYYDLAERGCHMFLKMLFEDNFVHSDLHPGNLLLRTNPGAPVSSVSASLLLPS 497

Query: 468 --AQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL-R 524
             A     + +L      ++ LD G+ + LSK +R N +  F AVA  DG+ A++  + R
Sbjct: 498 ADAYYSDGKMKLLH---ELVVLDAGLVSTLSKKERNNFIALFAAVACGDGKLASDLMIDR 554

Query: 525 LSKQ---QNCPNPKAFIEEVDEAFAFW--GTPEG---DLVHPAECMQQLLEKVRRHRVNV 576
           + +Q   Q+    + F E++   F     G  EG     V     + +++  VR ++  +
Sbjct: 555 MPEQIRPQSGVKREKFREDMQAIFDIVPPGKSEGFKLSKVRIGPVLAKIMNTVRENKTPI 614

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           DGN  ++++T +V EG  R+L   +N+
Sbjct: 615 DGNFASLVLTVMVGEGLGRRLAADFNI 641


>gi|301624742|ref|XP_002941660.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           2-like [Xenopus (Silurana) tropicalis]
          Length = 520

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/477 (29%), Positives = 225/477 (47%), Gaps = 86/477 (18%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG---- 277
           +  ET+GPA IK GQWA+TR DLF  D C   S+LH K   H + YT++ + RAFG    
Sbjct: 38  KATETSGPACIKLGQWASTRRDLFSEDFCNLFSKLHVKVTPHPWEYTERCLHRAFGTHWN 97

Query: 278 ----------------------------------RRLSEIFD----GFE--EAPVASGSI 297
                                             + L++ +D    G+E  E P  +G +
Sbjct: 98  RVLRFHSREPVGSGCVAQVYKAHADLSAIGQFDPQALTDSYDQEMTGYEAWEVPGLTGIL 157

Query: 298 AQV-------------HRASLRFRYPGQKV---------KPIVVAVKVRHPGVGESIRRD 335
             +              RAS + ++P +           + I VAVKV HPG+ + +R D
Sbjct: 158 GYLWEWRKKVVPSDRSGRASDQQQHPQESTLYPDGSDTQQLIPVAVKVLHPGLTQHVRMD 217

Query: 336 FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS 395
            +++   +++   IP  +WL L E V++F   M  Q+DL  EA +L  F   F +   + 
Sbjct: 218 ILLMKTWSQLIGWIPGFRWLSLTEMVEEFEKLMTHQIDLRSEARNLDLFRQKFDKVDFIR 277

Query: 396 FPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIH 455
           FP P+ PLV   +LVET+E GE VS Y+ E      +K  +A +G   LLKM+  DNF+H
Sbjct: 278 FPTPLRPLVTRNILVETFEDGEPVSLYLREPDAAP-IKQRIAGMGVDMLLKMIFTDNFVH 336

Query: 456 ADMHPGNILVRVAQKKSS-----------------QKRLFRSKPHVIFLDVGMTAELSKT 498
           AD+HPGNILV+   + ++                   R  R    ++ LD G+ A+L + 
Sbjct: 337 ADLHPGNILVQGVHQYATGAADQTTLVDMCDTLIVDVRPVRCPLRLVVLDAGIVAQLQEK 396

Query: 499 DRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAF--AFWGTPEGDLV 556
           D  NL   F AV    G T AE  L  ++   C + + + +++ E    A   T     +
Sbjct: 397 DLQNLRAVFTAVLLGQGETVAELILHHARANQCTDVEGYKKDMAELVTEARKTTVALGKL 456

Query: 557 HPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             A  + ++ + +  ++V ++ N  +V+   +VLEG  R LDP  ++++  + LLLK
Sbjct: 457 QVAVLLSRVFQILMTYKVKLESNFASVIFAVMVLEGLGRSLDPEVDILEAARPLLLK 513


>gi|348682487|gb|EGZ22303.1| hypothetical protein PHYSODRAFT_314057 [Phytophthora sojae]
          Length = 550

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/479 (29%), Positives = 234/479 (48%), Gaps = 28/479 (5%)

Query: 142 AWAQRVSAETEYFPSQNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMM 201
           AW++R +     FP   A     +D  + V + L  L+   +   + L L +  + +  +
Sbjct: 67  AWSRRNAELLRVFPRVLATSPTIEDKESLVQT-LRRLLRVALHFAKLLGLSLPLALTAPV 125

Query: 202 APFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAP 261
           A  A +  P+  E W  + L   + + P  +K+ QWA+TR D+FP   C +  + H  AP
Sbjct: 126 AFTAGAVLPRVEEQWWELALWLAQFSSPTVMKFLQWASTRRDMFPASFCDRFEKFHEHAP 185

Query: 262 EHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAV 321
            HS+  T+  +  AFG +  E+ +  +  P+ SG IAQV+R   R     ++V     AV
Sbjct: 186 MHSWEQTEDALRMAFGDKWWEVLE-VDSKPIGSGCIAQVYRG--RILATNEEV-----AV 237

Query: 322 KVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHL 381
           KV HP V + +  D  ++     +  V+P ++WL   +SV +FA  M  Q++L  E  +L
Sbjct: 238 KVIHPHVKQMVALDLQLLRGLVDMLEVVPTLRWLGGKDSVTEFASLMERQLNLRAEGENL 297

Query: 382 SRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGT 441
           +RF  +FR  K V FP P+       VLVE++E G   S    +++   R   A+A +  
Sbjct: 298 ARFSEHFRNRKGVRFPVPLMDYTTENVLVESFEGGLRFSEIFAQMEPPRR--KAVARVVL 355

Query: 442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSK----PHVIFLDVGMTAELSK 497
            A L+M+ +DNF H D+HPGN+L    Q      R+ RS+      V+ +D G+  +L +
Sbjct: 356 EAYLRMVFLDNFAHGDLHPGNLLFD-EQGTGRNTRVSRSEAIRNAGVVVIDAGIVTKLEQ 414

Query: 498 TDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL-- 555
            D  N VE F AVA  +G  A E  +  SK +  PN +    +  +  +F    E  +  
Sbjct: 415 QDLRNFVELFHAVATGNGYKAGELIVARSKGKVLPNGEVVPAKCKDLESFCTGMERIVNE 474

Query: 556 ----------VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
                     VH    ++Q++E    H V ++G   +++V+  VLE   RKLDP  +++
Sbjct: 475 ALCWRLSLKKVHVGALLRQVMELCCNHEVKLEGKYASIVVSIAVLEAVGRKLDPDIDIL 533


>gi|407868382|gb|EKG08834.1| hypothetical protein TCSYLVIO_000013 [Trypanosoma cruzi]
          Length = 665

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/447 (31%), Positives = 219/447 (48%), Gaps = 78/447 (17%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGR----- 278
           L   GP++IK+GQW ATRPD FP+ LC  L +L+ +   HS+++T+K + R         
Sbjct: 148 LTAMGPSYIKFGQWMATRPDFFPQTLCAALEKLYDQTSAHSWSHTEKVLRRTLHEATPSD 207

Query: 279 ---------RLSEIFDG----------------------FEEAPVASGSIAQVHRASLRF 307
                     L ++ +                        E  PV SGSIAQ+HR  LR 
Sbjct: 208 GLIEDNGMTSLPDVVETTKTSRKQVTMEQRHNALYYLQEIETVPVNSGSIAQIHRGVLRE 267

Query: 308 RYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVI-PAVKWLRLDESVQQFAV 366
              G       +A+KV HP + E I  D   +     I + + P+  +  L  SVQ+F+ 
Sbjct: 268 EVDGIPAG-TEMAIKVTHPRIREHIAADVTGMRWFVNILTFLWPSTVYFDLKRSVQEFSS 326

Query: 367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDEL 426
           F+ SQ+DL +E  +L +FI+NFR +  V FP+P+  L    VL+ET+E+GE        L
Sbjct: 327 FVQSQLDLRQECDNLQQFIFNFRDFPGVIFPRPLPSLCSQDVLIETFEEGE-------PL 379

Query: 427 QGHERLKS--ALAHIGTHALLKMLLVDNFIHADMHPGNILVRV----------------- 467
           QG +  ++   LA  G H  LKML  DNF+H+D+HPGN+L+R                  
Sbjct: 380 QGIQSGENYYDLAERGCHMFLKMLFEDNFVHSDLHPGNLLLRTNPGAPVSSVSASLLLPS 439

Query: 468 --AQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL-R 524
             A     + +L      ++ LD G+ + LSK +R N +  F AVA  DG+ A++  + R
Sbjct: 440 SDAYYPDGKMKLLH---ELVVLDTGLVSTLSKKERNNFIALFAAVACGDGKLASDLMIDR 496

Query: 525 LSKQ---QNCPNPKAFIEEVDEAFAFW--GTPEG---DLVHPAECMQQLLEKVRRHRVNV 576
           + KQ   ++    + F +++   F     G  EG     V     + +++  VR ++  +
Sbjct: 497 MPKQIRPRSGVKREKFRDDMQAIFDIVPPGKSEGFKLSKVRIGPVLAKIMNTVRENKTPI 556

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           DGN  ++++T +V EG  R+L P +N+
Sbjct: 557 DGNFASLVLTVIVGEGLGRRLAPDFNI 583


>gi|290982811|ref|XP_002674123.1| predicted protein [Naegleria gruberi]
 gi|284087711|gb|EFC41379.1| predicted protein [Naegleria gruberi]
          Length = 651

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 143/495 (28%), Positives = 241/495 (48%), Gaps = 76/495 (15%)

Query: 170 FVTSVLYSLVECVIL--LMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETA 227
           F   V YS+   +IL    R LY  + F      A   D       E +   V+++L+  
Sbjct: 133 FSPLVFYSMWHYLILKPFYRFLYTRIKFENG---AEMLDKAEKDLDEAFFMRVVQSLKDG 189

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGF 287
           G  FIK+ QW +TR DL    +CK  + LHS AP+H     K+ +   + +R  +  D  
Sbjct: 190 GTCFIKFSQWLSTRADLLDPHICKHFAALHSNAPKHHVKNVKQLVNDQYRKREGKDEDII 249

Query: 288 ----EEAPVASGSIAQVHRASL-RFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
                  P+ASG+I QV+R  + RF    +K +   VA+KVRHP V   I +D  I+ L 
Sbjct: 250 TWIDSNHPLASGAIGQVYRGKMKRFNDHTKKEEIKDVAIKVRHPYVETQILQDLKILELF 309

Query: 343 AKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKD-VSFPKPV 400
             ++S  +P++ WL+L E+V++F   M  Q +   E  +L  F  NF+ +K  + FP P 
Sbjct: 310 CVLTSRFLPSLGWLQLQENVKEFTKCMKLQTNFRFEGENLKAFQKNFQDFKSTIIFPTPY 369

Query: 401 YPLVHPAVLVETYEQGECVSRYVD-----------------------------------E 425
           +    P++L+E++E G  +  Y+D                                   E
Sbjct: 370 F--YTPSILIESFEPGISIQHYLDQARIDREISIPNPVPKPEQILDELVHEKGNKPVSRE 427

Query: 426 LQG------HERLKSA-----LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ 474
           ++G       +RL+       +A +GT   LKM+L DN +HAD+HPGN++VR+ ++    
Sbjct: 428 VEGEIDEKEQQRLQQTNQRHRVAELGTDLFLKMMLHDNLLHADLHPGNLMVRINKET--- 484

Query: 475 KRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ--QNC- 531
                ++P ++ LD GM  +LS  DR N ++ F A+ R +G  AA+  +  S++  +N  
Sbjct: 485 -----NEPMLVVLDAGMVTQLSSEDRQNFIDLFSAIIRGEGYYAAQLMIERSRKLRENTG 539

Query: 532 -----PNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVT 586
                 N + F +E+ E   F      + +   + M+ +L   R++RV ++    T++++
Sbjct: 540 YSLTPENAEKFKKEMAELITFVLDKPIEEIQVGKVMETVLTLGRQYRVPIESTFSTLVIS 599

Query: 587 TLVLEGWQRKLDPGY 601
           T+V+EG  R+L+P +
Sbjct: 600 TVVVEGIARQLNPRF 614


>gi|312065068|ref|XP_003135610.1| atypical/ABC1/ABC1-C protein kinase [Loa loa]
          Length = 582

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 240/512 (46%), Gaps = 70/512 (13%)

Query: 147 VSAETEYFPSQNAFYTRAQD-GHAFVTSVLY---SLVECVILLMRALYLGVLFSPSIMMA 202
           V  E  +  +     T + D  +  +  V+Y   + V  + +++R + L + F+P ++ +
Sbjct: 74  VGEENPWLVASTRIETTSNDYSYLSIRMVIYLYRTTVRAIKIMLRIVSLSLFFTPLLITS 133

Query: 203 PFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPE 262
           P A  F   F ELW   +L  ++ +GP FIK GQWA+TR D+F +  C ++S LH+K   
Sbjct: 134 PIA-YFWSSFGELWWRWLLWMVQRSGPTFIKLGQWASTRRDIFSKSFCDRMSVLHTKTTC 192

Query: 263 HSFAYTKKTIERAFGR-RLSEIFDGFEEAPVASGSIAQVHRASLR---------FRYPGQ 312
             +  ++  ++  FG  R  +     E   + SG IA+V++  L             P  
Sbjct: 193 RPWHRSQYALDHLFGSSRWKDFVVSVETDAIGSGCIAEVYKGILDVCTFEKITGIHLPFA 252

Query: 313 KVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISS-VIPAVKWLRLDESVQQFAVFMMSQ 371
           K + + +A+K    GV ESI  D  I+    ++   +IP + ++     + QF       
Sbjct: 253 KDRHVDIAIKTVKDGVRESIDIDLSIMQCVVRLMEMLIPRLSYINPVSCLNQF------- 305

Query: 372 VDLAREAAHLSRFIYNFRRWKD-VSFPKPVYPLVHPAVLVETYEQGECVSRYV--DELQG 428
               RE   L RF  NF   K  V FP+ +       V++ET+E G C+++ +  ++L  
Sbjct: 306 ----REVLELQRFGDNFDPKKTRVRFPEVI--CYSRGVIIETFENGLCINKLITDEQLME 359

Query: 429 HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKK--------------SSQ 474
              LK  +A IG  ALLKM+ VDNF+H D+HPGNIL+R   +               +  
Sbjct: 360 QNELKKKVALIGVRALLKMIFVDNFVHGDLHPGNILLRFDNRDQRPTNWFISFRTSINKL 419

Query: 475 KRLFRS---------------------KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARR 513
           K + RS                     +P ++ LD G+  E    +   L   F+AV  +
Sbjct: 420 KEILRSFTSMSYGIRISYDDYCRNESGEPTLVILDTGIALEQKPQNLQKLRLLFRAVVDK 479

Query: 514 DGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL--VHPAECMQQLLEKVRR 571
            GR   E  L  S +Q C +P+AF +EVD+        + +L  ++ +E + +L   V R
Sbjct: 480 RGRDVGELLLLHSPKQRCKDPEAFYDEVDQIVQI-ARSKSNLRRLNISEMLNELFSIVSR 538

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           H V +D +  TV++  +VLEG  R LDP  ++
Sbjct: 539 HEVALDPSFTTVVLAVIVLEGLGRSLDPDLDL 570


>gi|72392861|ref|XP_847231.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|62358471|gb|AAX78933.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70803261|gb|AAZ13165.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 636

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 159/505 (31%), Positives = 242/505 (47%), Gaps = 63/505 (12%)

Query: 174 VLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQF--RELWLHVVLRTLETAGPAF 231
           VL  ++ C ++++R + L V   P I       ++G  F    ++   V   L   GP++
Sbjct: 85  VLREILFCGLVVLRTILLVVHMVPVIWFTFL--TYGLHFCSEPVFFGKVRDMLLAMGPSY 142

Query: 232 IKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF----------GRR-- 279
           IK GQW ATRPD+F   +C  L +L+     HS+++T+KT+   F          GR+  
Sbjct: 143 IKLGQWIATRPDIFSPVMCSALEKLYDNTEPHSWSHTEKTLRNTFRESPQGSNDEGRKGD 202

Query: 280 ----------LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329
                     L EI    E+ PV SGSIAQVHRA LR    G       VA+K+ HP   
Sbjct: 203 TGTRQNVLYYLREI----EKVPVNSGSIAQVHRAVLREDVDGVPTG-TTVAIKILHPLTR 257

Query: 330 ESIRRDFVIINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
           E I  D V++      ++++     +L L  ++ +F+  + SQ+ L  E  +L +F +NF
Sbjct: 258 EIICADLVVMKCFVNVVTTLFRDTVYLDLRRALGEFSSLLCSQLSLDLECDNLKQFAFNF 317

Query: 389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML 448
           R +  V FPKP+     P VLVET+E+G    R + E+Q  +  + A A  G H  LKML
Sbjct: 318 RDFPGVIFPKPLPSFCTPDVLVETFEEG----RPLQEIQPCDEFRDA-AQRGCHMFLKML 372

Query: 449 LVDNFIHADMHPGNILVRVAQ------------KKSSQKRLFRSKP----HVIFLDVGMT 492
             DNF+H+D+HPGNIL+R                 ++ +R    KP     +I LD G+T
Sbjct: 373 FEDNFVHSDLHPGNILIRANPGAPLNVPPTTFFSPTTVERYPDGKPKLKYELIILDAGLT 432

Query: 493 AELSKTDRVNLVEFFKAVARRDGRTAAECTL-RLSKQQNCPNPKAFIEE--VDEAFAFWG 549
             LS  +R N +  F AVA  DG   A+  + RL      P P+A  E+  +D    F  
Sbjct: 433 TSLSPEERNNFISLFAAVACGDGSLGADLMIDRLPPDVRPPYPEAKREKFRMDMTNIFNT 492

Query: 550 TPEGDL-------VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYN 602
              G         V     + +++  +R ++  +DGN  ++++T +V EG  RKL P +N
Sbjct: 493 VAPGASDGFTLRHVRIGSTLCKIMNTLRENKTPIDGNFASLVLTVVVGEGLGRKLIPDFN 552

Query: 603 VMDTLQTLLLKADWAKSLSYTIDGL 627
           +       L+       LSY  + L
Sbjct: 553 LFAEAVPYLMVLLEDNELSYLANKL 577


>gi|412985585|emb|CCO19031.1| predicted protein [Bathycoccus prasinos]
          Length = 750

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/328 (37%), Positives = 184/328 (56%), Gaps = 40/328 (12%)

Query: 319 VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREA 378
           VAVKVRHPGV ++++RDF I+   A  +  I  ++ L+L+ +V QF V M+SQVDL  EA
Sbjct: 376 VAVKVRHPGVVDALKRDFKILLWFASFTKNISWLEPLQLENTVGQFGVHMLSQVDLGVEA 435

Query: 379 AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERL------ 432
            +L+RF  +F     VSFP P+  L    VLVET+E G  +S Y+   +  E++      
Sbjct: 436 ENLNRFRKSFLLMPAVSFPTPITSLSAEDVLVETFESGTTISSYLVSPEVAEKIGFECSE 495

Query: 433 -KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKK-----------------SSQ 474
               LA +G   LLKML+ DNF+HAD+HPGNILVR+  K                  + +
Sbjct: 496 QNKTLAALGVQTLLKMLIDDNFLHADLHPGNILVRLPGKNMMFSSSEADDHGPTLEANGE 555

Query: 475 KRLFRS-KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL-------- 525
           +++  + KP +I LD G+ A L++ ++ +L E F A+ R DGR  AE  L+         
Sbjct: 556 RQMTDAPKPEIIILDTGLAATLTRENQSDLAEMFSAMLRWDGRGVAERILKFVAPSSKDT 615

Query: 526 SKQQNCPNPKAFIEEVDEAFAFW--GTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTV 583
           S Q N    + F  E++EA   +  G P        +CM ++ E V+ HR+ +D ++   
Sbjct: 616 SIQNNAIESERFKSEMEEAVKQFAAGPPRA-----GDCMSRVFEIVQEHRLCLDPSIMIA 670

Query: 584 MVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +VT +VLEGWQ +LDP  +++D L ++L
Sbjct: 671 VVTVMVLEGWQWRLDPSVSILDRLNSVL 698



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/129 (50%), Positives = 94/129 (72%), Gaps = 2/129 (1%)

Query: 180 ECVILLMRALYLGVLFSPSIMMAP--FADSFGPQFRELWLHVVLRTLETAGPAFIKWGQW 237
           E V+ ++R+++L  LF+P+++ AP  +  S    +++LW  ++ +TLE AGPAFIKWGQW
Sbjct: 156 EKVMTILRSIHLAFLFAPALVFAPLTYLKSCPLWYKKLWYMLIRKTLEFAGPAFIKWGQW 215

Query: 238 AATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSI 297
           A+TR D+FP  LC +L +L S APEH + +TK T+ER +G     IF+ F+E P+ASGSI
Sbjct: 216 ASTRYDVFPAVLCHELEKLQSTAPEHKWEHTKSTLERVYGDTFDHIFESFDEHPMASGSI 275

Query: 298 AQVHRASLR 306
           AQVHRA+LR
Sbjct: 276 AQVHRATLR 284


>gi|261330446|emb|CBH13430.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 636

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 160/505 (31%), Positives = 242/505 (47%), Gaps = 63/505 (12%)

Query: 174 VLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQF--RELWLHVVLRTLETAGPAF 231
           VL  ++ C ++++R + L V   P I       ++G  F    ++   V   L   GP++
Sbjct: 85  VLREILFCGLVVLRTILLVVHMVPVIWFTFL--TYGLHFCSEPVFFGKVRDMLLAMGPSY 142

Query: 232 IKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF----------GRR-- 279
           IK GQW ATRPD+F   +C  L +L+     HS+++T+KT+   F          GR+  
Sbjct: 143 IKLGQWIATRPDIFSPVMCSALEKLYDNTEPHSWSHTEKTLRNTFRESPQGSNDEGRKGD 202

Query: 280 ----------LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329
                     L EI    E+ PV SGSIAQVHRA LR    G       VA+K+ HP   
Sbjct: 203 TGTRQNVLYYLREI----EKVPVNSGSIAQVHRAVLREDVDGIPTG-TTVAIKILHPLTR 257

Query: 330 ESIRRD-FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
           E I  D FV+      ++++     +L L  ++ +F+  + SQ+ L  E  +L +F +NF
Sbjct: 258 EIICADLFVMKCFVNVVTTLFRDTVYLDLRRALGEFSSLLCSQLSLDLECDNLKQFAFNF 317

Query: 389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML 448
           R +  V FPKP+     P VLVET+E+G    R + E+Q  +  + A A  G H  LKML
Sbjct: 318 RDFPGVIFPKPLPSFCTPDVLVETFEEG----RPLQEIQPCDEFRDA-AQRGCHMFLKML 372

Query: 449 LVDNFIHADMHPGNILVRVAQ------------KKSSQKRLFRSKP----HVIFLDVGMT 492
             DNF+H+D+HPGNIL+R                 ++ +R    KP     +I LD G+T
Sbjct: 373 FEDNFVHSDLHPGNILIRANPGAPLNVPPTTFFSPTTVERYPDGKPKLKYELIILDAGLT 432

Query: 493 AELSKTDRVNLVEFFKAVARRDGRTAAECTL-RLSKQQNCPNPKAFIEE--VDEAFAFWG 549
             LS  +R N +  F AVA  DG   A+  + RL      P P+A  E+  +D    F  
Sbjct: 433 TSLSPEERNNFISLFAAVACGDGSLGADLMIDRLPPDVRPPYPEAKREKFRMDMTNIFNT 492

Query: 550 TPEGDL-------VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYN 602
              G         V     + +++  +R ++  +DGN  ++++T +V EG  RKL P +N
Sbjct: 493 VAPGASDGFTLRHVRIGSTLCKIMNTLRENKTPIDGNFASLVLTVVVGEGLGRKLIPDFN 552

Query: 603 VMDTLQTLLLKADWAKSLSYTIDGL 627
           +       L+       LSY  + L
Sbjct: 553 LFAEAVPYLMVLLEDNELSYLANKL 577


>gi|171847066|gb|AAI61918.1| Adck2 protein [Rattus norvegicus]
          Length = 567

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 149/500 (29%), Positives = 239/500 (47%), Gaps = 56/500 (11%)

Query: 157 QNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADS--FGPQFRE 214
           +N     AQ+G       L  ++ C+ L +RA   GVL +  + +          P F  
Sbjct: 77  ENGLVKVAQEGP------LARILLCLCLGLRA---GVLLAKFLPLLFLYPLTYLAPGFST 127

Query: 215 LWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIER 274
           LWLH++ +  ET+GP +IK GQWA+TR DLF    C + S+LH +   H +A T+  +++
Sbjct: 128 LWLHLLFKATETSGPTYIKLGQWASTRRDLFSEAFCVQFSKLHVQVTPHPWARTEYLLQQ 187

Query: 275 AFGRRLSEIFDGFEEAPVASGSIAQVHRA--SLRFRYPGQKVKPIVVAVKVRHPGVGE-S 331
           AFG     I     + PV SG +AQV++A  ++     G+  +   ++V    PG G   
Sbjct: 188 AFGEDWHSILFFETQEPVGSGCVAQVYKAFANISLLEKGRIWRLGELSV----PGTGTVG 243

Query: 332 IRRDFVII------NLAAKI---SSVIPAVKWLRLDESVQQ---------FAVFMMSQVD 373
            +RD  +       NLA +      ++P    +R +  V Q           + +  + D
Sbjct: 244 TQRDPFMKDWRPSENLADETFIEKLLLPKADLVRSEVGVSQAPGQPPKSDHLIPVAVKTD 303

Query: 374 LAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLK 433
           L  EA +L  F +NF+    V FP P++PL+   +LVETYE+   VS Y  +      LK
Sbjct: 304 LRYEAQNLEHFQHNFQNMASVKFPTPLHPLITRDILVETYEESVPVSSY-QQAGVPTDLK 362

Query: 434 SALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV--------- 484
             +A +G + L KM+ VDNF+H D+HPGNILV+ A   SS   + + +  V         
Sbjct: 363 RKIAQLGINMLFKMIFVDNFVHGDLHPGNILVQGADGVSSSLEMQQQQVDVYDTLVATIA 422

Query: 485 --------IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKA 536
                   + LD G+ A+L  +D  N    F AVA   G   AE  L  ++   C + + 
Sbjct: 423 PALCPLRLVLLDAGIVAKLQASDLRNFRAVFLAVAMGQGHRVAELMLHHAQANECKDVEK 482

Query: 537 FIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQ 594
           F  E+      A   T   + +H +  +  + + +  H+V ++ N  +++V  +VLEG  
Sbjct: 483 FKAEMATLVTQARKNTLTLEKLHVSSLLSSVFKLLMTHKVKLESNFASIVVAIMVLEGLG 542

Query: 595 RKLDPGYNVMDTLQTLLLKA 614
           R LDP  ++++  +  LLK 
Sbjct: 543 RSLDPKLDILEAAKPFLLKG 562


>gi|70906403|gb|AAZ14922.1| putative kinase protein [Coprinellus disseminatus]
          Length = 686

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 158/531 (29%), Positives = 246/531 (46%), Gaps = 117/531 (22%)

Query: 180 ECVILLMRALYLGVLFSPSIMMAPFADSFGPQFREL---------WLHVVLRTLETAGPA 230
           E ++   R  YL  LF P I+ +P     GPQ ++          W     R +E AGP 
Sbjct: 94  EPILTAKRFAYLFFLFVPVIVSSPML-LVGPQSKQYRGDRWGAVWWYGFFTRRMEAAGPT 152

Query: 231 FIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEA 290
           FIK  QWAA+R DLFP  LC++L  LHS+  +H   +T++ +ER F R   E+F+ F+E 
Sbjct: 153 FIKLAQWAASRVDLFPPILCERLGALHSQGRKHPIEHTRRVVERVFKRSFEEVFEEFDED 212

Query: 291 PVASGSIAQVHRASLR-------FRYP-------GQKVKPIV------------VAVKVR 324
           P+ SG+IAQV+RA+L+       +  P          V P++            VA+K+ 
Sbjct: 213 PIGSGAIAQVYRATLKQDLIPPSYHGPRRTRKRIADTVGPVILQDPPPAPPTSCVAIKIL 272

Query: 325 HPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRF 384
           HP V ++I RD  I++  AK  + +P +KWL L E V+ F   M  Q+DL  EA +L  F
Sbjct: 273 HPQVSKTISRDLSIMSFFAKCLNALPGMKWLSLPEEVEVFGSMMYQQLDLRHEADNLITF 332

Query: 385 IYNFR-RWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHA 443
             +F  R   V+FP+P+     P +LVE Y+    +  ++    G       +A +G +A
Sbjct: 333 EQHFAPRKVPVTFPRPLKVWSTPEMLVEEYQNALPLELFLR--NGGGPYDEQVATVGLNA 390

Query: 444 LLKMLLVDNFIHADMHPGNILVRVAQK-------KSSQKRLFRSKPH------------- 483
            L MLL+DNF+H+D+HPGNI+++ ++        K+    LF S P              
Sbjct: 391 FLNMLLLDNFVHSDLHPGNIMIKFSKPPTTGILLKNIWNHLFPSAPRLDLETGTFEPLSP 450

Query: 484 VIFLDVGMT------------------AELSK-----------------------TDRVN 502
           +I  D   +                  AEL K                       T+R N
Sbjct: 451 IIPADYSQSDEIVGKLRSLANNPSAWHAELDKLHVSGYVPEIIFIDAGLVTTLNTTNRKN 510

Query: 503 LVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF----------WGTPE 552
            ++ F+AVA  DG    +  +  S+      P+  I++  E FA             T  
Sbjct: 511 FLDLFRAVAEFDGYRTGQLMIERSR-----TPELAIDQ--ETFALKMQNLILSVKRRTFS 563

Query: 553 GDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
              +  A+ +  +L+ VR H V ++G+    +++ L+LEG  R+LDP  ++
Sbjct: 564 LGQIKIADLLTDVLKNVRTHHVKMEGDFINTVISILLLEGIGRQLDPDMDL 614


>gi|154299011|ref|XP_001549926.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
          Length = 492

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 144/447 (32%), Positives = 207/447 (46%), Gaps = 103/447 (23%)

Query: 253 LSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEEAPVASGSIAQVHRASLR--FRY 309
           +S+LHS AP HS   TK+ I RAF GR   +IF+ F+E P+  G+IAQV++A L+     
Sbjct: 1   MSQLHSNAPAHSLHATKRIISRAFDGRPFDDIFEEFQEQPLGVGAIAQVYKAKLKPDLAT 60

Query: 310 PG--------------------------QKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           PG                          Q+V    VA+KV HPGV   +RRD  I+ + A
Sbjct: 61  PGDPDLQEPTNIRKNVRKNVDTLIKSTPQRVPSSYVAIKVLHPGVERVVRRDLRIMWVFA 120

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            + ++IP  +WL   + V+QF   M  Q+DL  EAA+LS F  NF+      FP P    
Sbjct: 121 SVINLIPTFEWLSFPDEVEQFGQMMRLQLDLRIEAANLSIFRKNFKPRTTAWFPFPYTQF 180

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
               VLVE + QG  +S +++   G    +  +A  G  A L+MLL+DNFIHAD+HPGNI
Sbjct: 181 TTRQVLVEEFAQGIPLSDFME--NGGGVFQQDIADEGLDAFLRMLLIDNFIHADLHPGNI 238

Query: 464 LVRVAQ-----------------------------------KKSSQ----------KRLF 478
           +VR  Q                                   +K  Q          K  F
Sbjct: 239 MVRFYQSEKPNLPFSKHKDEDPQSQPDVTEQVLARLQPYRHRKDPQAWQAELSKIDKEGF 298

Query: 479 RSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFI 538
           R  P +IF+D G+  EL+ T+R N ++ FKAVA  DG  A          Q C  P A I
Sbjct: 299 R--PQLIFIDTGLVTELNATNRRNFLDLFKAVAEFDGYKAGHLMC-----QRCRQPDAVI 351

Query: 539 EE--------------VDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVM 584
           +E                   A      GD+++      ++L  VR H V ++G+   V+
Sbjct: 352 DEEIYSLKMQHLVLGVKSRTLALGNMKIGDILN------EVLSMVRTHHVRMEGDFVNVV 405

Query: 585 VTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           ++ L+LEG  R L+P  +++ +   +L
Sbjct: 406 ISILLLEGIGRSLNPDIDLLSSALPIL 432


>gi|301109475|ref|XP_002903818.1| glycoside hydrolase, putative [Phytophthora infestans T30-4]
 gi|262096821|gb|EEY54873.1| glycoside hydrolase, putative [Phytophthora infestans T30-4]
          Length = 537

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/416 (31%), Positives = 202/416 (48%), Gaps = 27/416 (6%)

Query: 205 ADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHS 264
           A +  P   E W  + L   + + P  +K+ QWA+TR D+FP   C +    H  AP HS
Sbjct: 116 AGTLMPTVVERWWELALWLAQYSSPTVMKFLQWASTRRDMFPASFCDRFETFHEHAPMHS 175

Query: 265 FAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVR 324
           +A T+  +  AFG     I +  +  P+ SG IAQV+R  +       K     VAVKV 
Sbjct: 176 WAQTEDALSMAFGDNWRGIME-VDNHPIGSGCIAQVYRGLI-------KETNEQVAVKVI 227

Query: 325 HPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRF 384
           HP V + +  D  ++     +   IP ++WL   +SV +FA  M  Q++L  E  +L+ F
Sbjct: 228 HPHVKQMVALDLQLLQTFVALFEAIPTLRWLGGKDSVTEFASLMERQLNLRTEGENLALF 287

Query: 385 IYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL 444
             +FR  K + FP PV       VLVE++E G   S  + +++   R   A+A +   A 
Sbjct: 288 SEHFRNRKGLRFPVPVMDYTTENVLVESFEDGLHFSEILSQMEPPRR--KAVARVVLEAY 345

Query: 445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSK----PHVIFLDVGMTAELSKTDR 500
           L+M+ +DNF H D+HPGN+L    Q +    R+ RS+      V+ +D G+  +L   D 
Sbjct: 346 LRMVFLDNFAHGDLHPGNLLFD-EQVRGRNSRVSRSEAIRNAGVVVIDAGIVTKLEPQDL 404

Query: 501 VNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----- 555
            N VE F AVA  +G  A E  +  SK +  PN      +  +  +F    E  +     
Sbjct: 405 RNFVELFHAVATGNGYKAGELIVARSKGRIGPNGAVIPTKCKDLESFCTGMERIVNDALS 464

Query: 556 -------VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
                  VH    ++Q++E    H V ++G   +++V+  VLE   RKLDP  +++
Sbjct: 465 WRLSLKKVHVGALLRQVMELCCTHEVKLEGKYASIVVSIAVLEAVGRKLDPDLDIL 520


>gi|405117789|gb|AFR92564.1| atypical/ABC1 protein kinase [Cryptococcus neoformans var. grubii
            H99]
          Length = 1056

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 224/518 (43%), Gaps = 145/518 (27%)

Query: 170  FVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE--------------- 214
            F+  +   ++E +    R L+L  LF P I+ +P      P  R                
Sbjct: 552  FIRIIEIYILEPIGTFFRFLHLACLFVPVILSSPMLLVGKPGKRHRSRSGRPINEEEQTW 611

Query: 215  ---LWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKT 271
                W   +++ +E AGP+FIK GQWAA+R DLFP +LC+K+S+LHS    HS  YTKK 
Sbjct: 612  GAIWWYGFLVKQMERAGPSFIKLGQWAASRADLFPAELCEKMSKLHSNGRPHSLGYTKKV 671

Query: 272  IERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGES 331
            +E AF     +IF+ F+  P ++ S                      VA+KV HP V ++
Sbjct: 672  MEAAFNMGFDDIFEEFDGLPRSTESDT------------------ATVAIKVIHPRVRKT 713

Query: 332  IRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF-RR 390
            IRRD  I+++ A   +  P ++W  L E VQ F   M SQ+DL  EA++L +F++NF +R
Sbjct: 714  IRRDIAIMSIFANFINAFPGMQWFSLPEEVQVFGEMMNSQLDLRVEASNLDKFLHNFEKR 773

Query: 391  WKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLV 450
             + V+FP P+                                             +MLL+
Sbjct: 774  GRRVTFPTPIK--------------------------------------------EMLLI 789

Query: 451  DNFIHADMHPGNILVR---------------------------------------VAQKK 471
            DN+ H D+HPGNI+VR                                        A  K
Sbjct: 790  DNWTHGDLHPGNIMVRFYKPTTTDYLSPLLHAFGKNPTPSADAPVASHDDLVHTLTAVSK 849

Query: 472  SSQKRLFR--------SKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
              +K L +         +P +IF+D G+   L   +R N ++ F+AVA  DG  A +  +
Sbjct: 850  DREKWLNKLDELHQEGYEPQLIFIDAGLVTSLDSKNRRNFLDLFQAVAEFDGYKAGKLMI 909

Query: 524  RLSKQQNCPNPKAFIEEVDEAFAFW----------GTPEGDLVHPAECMQQLLEKVRRHR 573
                 + C  P   I+E  E FA             T     +  ++ +  +L+ VR+H 
Sbjct: 910  -----ERCRTPDFAIDE--ETFALKMQHIVLSVKSKTFSLAKIKISDILTDVLKAVRQHH 962

Query: 574  VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            V ++G+    +++ L+LEG  R+LDP  ++  +   +L
Sbjct: 963  VKMEGDFVNTVISILLLEGIGRQLDPDMDLFKSALPIL 1000


>gi|170085551|ref|XP_001873999.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164651551|gb|EDR15791.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 660

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 189/358 (52%), Gaps = 47/358 (13%)

Query: 159 AFYTRAQDGHAFVTSVLY----SLVECVILLMRALYLGVLFSPSIMMAPF---------- 204
             ++ ++   + +T +L     ++ E ++   R +YL  LF P I+ +P           
Sbjct: 54  TIFSPSESHRSLITRILDILRDTIWEPLLTAKRFIYLFALFLPVIVSSPMLLVGKPKKKY 113

Query: 205 -ADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEH 263
             D +G  +   W   ++  +E+AGP FIK  QWA +R DLFP  LC++L  LHS+   H
Sbjct: 114 KGDRWGAIW---WYGFLVHQMESAGPTFIKLAQWAGSRADLFPTCLCERLGSLHSQGRNH 170

Query: 264 SFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLR--------------FRY 309
             ++TK  IE+ F R   ++F+ F++ P+ SG+IAQV+RA+L+               + 
Sbjct: 171 PLSHTKAVIEKVFQRPFDQVFEHFDQVPIGSGAIAQVYRATLKQTLLPPSYLGPRRTRKS 230

Query: 310 PGQKVKPIV------------VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRL 357
           P   + P++            VA+K+ HP V ++I RD  I+   A+  S++PA++WL L
Sbjct: 231 PAGPLGPVIRQDPPPSVPTASVAIKILHPHVAKTISRDLSIMAFFARCISILPAMQWLSL 290

Query: 358 DESVQQFAVFMMSQVDLAREAAHLSRFIYNFR-RWKDVSFPKPVYPLVHPAVLVETYEQG 416
            E VQ F   M  Q+DL  EA +L  F  NF  R   V+FP+P+       +LVE YE  
Sbjct: 291 PEEVQVFGAMMHQQLDLRNEADNLLAFENNFAPRKVPVTFPRPLKLWSTKDLLVEEYENA 350

Query: 417 ECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ 474
             +  ++    G       +A +G  A L MLL+DNF+H+D+HPGNI+++ ++  +++
Sbjct: 351 LPLEAFLR--NGGGPYDEQVATVGLDAFLNMLLLDNFVHSDLHPGNIMIKFSKPLTTR 406



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 17/132 (12%)

Query: 482 PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEV 541
           P ++F+D G+   L   +R N ++ F+AVA  DG    +  +  S+     +P+  I+  
Sbjct: 470 PEIVFIDAGLVTTLDAHNRRNFLDLFRAVAEFDGYRTGQLMIERSR-----SPELAIDT- 523

Query: 542 DEAFAFW----------GTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLE 591
            E FA             T     +  ++ + ++L+ VR H V ++G+    +++ L+LE
Sbjct: 524 -ETFALKMQHLVLNVKRKTFSLGQIKISDLLTEVLKAVRVHHVKMEGDFINTVISVLLLE 582

Query: 592 GWQRKLDPGYNV 603
           G  R+LDPG ++
Sbjct: 583 GIGRRLDPGMDL 594


>gi|308811679|ref|XP_003083147.1| Predicted unusual protein kinase (ISS) [Ostreococcus tauri]
 gi|116055026|emb|CAL57422.1| Predicted unusual protein kinase (ISS) [Ostreococcus tauri]
          Length = 622

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/373 (35%), Positives = 194/373 (52%), Gaps = 48/373 (12%)

Query: 272 IERAFGRRLSEIFDGFEEAPVASGSIAQVHR-ASLRFRYPGQKVKPIVVAVKVRHPGVGE 330
           + RA    L E  DG      A+G   +V R  + R R  GQK +   VAVKVRHPGV +
Sbjct: 208 VSRAAAGMLEEWRDG------AAGIGREVERLVNGRIRRGGQKRE---VAVKVRHPGVVD 258

Query: 331 SIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRR 390
           ++ RDF I++  A +S  I  ++ L+L+ ++ QF V M+ QVD   EA +L +F  +F  
Sbjct: 259 ALTRDFEILSWMATLSKNIKWLEPLQLENTISQFGVHMLQQVDFRHEAENLDKFRKSFLL 318

Query: 391 WKDVSFPKPVYPLVHPAVLVETYEQGECVSRYV------DELQGHERLKSALAHIGTHAL 444
              VSFP P+  L    +LVETYEQG  ++ Y+       E  G+ + K+ LA +G   L
Sbjct: 319 MPAVSFPTPIMGLATEEILVETYEQGVSIASYLLSPEAAKEQLGNAQNKT-LAGLGVKTL 377

Query: 445 LKMLLVDNFIHADMHPGNILVR----VAQKKSSQKR-------------------LFRSK 481
            KML+ DNF+HAD+HPGNILVR    VA   SS  R                   L  + 
Sbjct: 378 FKMLIDDNFLHADLHPGNILVRLPDGVAHTLSSIVRGNASTSLKDHDDLDGHGTTLSDNT 437

Query: 482 PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCP-NPKAFIEE 540
           P +I LD G+  +LS   + +L + F+A+   DG T A+  L  +       +   F  E
Sbjct: 438 PEIIILDTGLATKLSPFHQASLAKMFQAIVTWDGSTVADSILSFADNVKANYDYTEFRNE 497

Query: 541 VDEAFAFWG--TPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLD 598
           + +  + +   TP        ECM  + E V+++ + +D NV   +VT +VLEGWQ +LD
Sbjct: 498 ITKTVSNFAATTPRA-----GECMGAIFETVQKYHLCLDPNVMIAVVTVMVLEGWQWRLD 552

Query: 599 PGYNVMDTLQTLL 611
           P  N++D L  +L
Sbjct: 553 PTVNILDYLDDVL 565



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/105 (53%), Positives = 72/105 (68%), Gaps = 10/105 (9%)

Query: 214 ELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIE 273
           ELW  +  R LE AGPAFIKWGQWA+TR D+FP  LC++L  L + APEHS+  TKK +E
Sbjct: 76  ELWYGLFRRVLEAAGPAFIKWGQWASTRYDIFPAPLCRELEHLQAGAPEHSWRETKKILE 135

Query: 274 RAFG-------RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPG 311
           R++G        R  EIF+ F+E  +ASGS+AQ+HRA L+   PG
Sbjct: 136 RSYGVGADGSTSRFEEIFEWFDEKALASGSVAQIHRARLK---PG 177


>gi|145513314|ref|XP_001442568.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409921|emb|CAK75171.1| unnamed protein product [Paramecium tetraurelia]
          Length = 592

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 243/528 (46%), Gaps = 87/528 (16%)

Query: 173 SVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFI 232
           S+   +++ +   +R ++L + F P  +  PF+  F       WL  ++ TL++AGP +I
Sbjct: 76  SLFQRMIQSLRRKIRFMHLLLKFLPLAIALPFSLIFKAYLFPYWLKYLVYTLQSAGPLWI 135

Query: 233 KWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPV 292
           K GQWA+ R D+F  ++ K L  L    P HS   T +  E+AF +++ ++FD FEE P+
Sbjct: 136 KLGQWASHRGDIFGEEIIKALESLRDDTPPHSLEKTNQQFEQAFKKKIKDVFDEFEEKPI 195

Query: 293 ASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAV 352
           AS SIAQVHRA L   Y         VA+KVRHP + +++  D  I+   A   S    +
Sbjct: 196 ASASIAQVHRAKLNGEY---------VAIKVRHPDIIDNLVMDIRILYKIANFFSQTLKI 246

Query: 353 KWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVET 412
           K L +  + ++F   +++Q DL  E  +L  F   F+    V FP+P+   +   +L ET
Sbjct: 247 KQLGMPVTFEEFQKTLVNQTDLRFEGRNLKVFCEKFKNNPHVIFPRPIEEYISADILTET 306

Query: 413 YEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLL----------------------- 449
           YE    +++++ + +  E    ALA++G  A  KML+                       
Sbjct: 307 YEDAIPLTQFLKQERTEEHY--ALANLGLKAFYKMLIYDNFIHADCHAGNIMIRIKDLPV 364

Query: 450 ----------------------VDNFIHA-------------DMHPGNILVRVAQKKSSQ 474
                                 VD+ I                M  GN+L ++ Q+K S 
Sbjct: 365 PKTFNEKVQQQLWFLQDSVYEIVDDLIEKGLTKIAEYQTSSQTMDQGNML-KLKQEKKSD 423

Query: 475 KRLF----------RSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR 524
           +RLF          R    +IFLD GM   L+K+DR + ++    V  R      +  L+
Sbjct: 424 ERLFHTFLRCQGSTRKDVQIIFLDPGMITILNKSDRASFIKLVMFVTLRKPYECGKLMLQ 483

Query: 525 LS----KQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
           L+    +Q        F++E+ + F          ++  + ++ +LE +R + ++++G+ 
Sbjct: 484 LAQYNQRQIEQKVQDKFMKEMQDLFTNVCKVPLAQMNIGQVLRSMLEILRANGMSIEGHF 543

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYTIDGLM 628
             ++   +VLEG  + LDP  N++    + ++     +++  TID ++
Sbjct: 544 AALLTNMIVLEGLAKTLDPDLNIVAKAASFIIH---IRTIDKTIDEII 588


>gi|397575216|gb|EJK49590.1| hypothetical protein THAOC_31519 [Thalassiosira oceanica]
          Length = 604

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 142/412 (34%), Positives = 206/412 (50%), Gaps = 35/412 (8%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-- 277
            L +L+  GPAF+K GQWAATR DLFP  +C +LS+LH     H F YT + +  AFG  
Sbjct: 190 TLYSLQNLGPAFVKLGQWAATRRDLFPPHVCNRLSQLHDTVITHPFRYTHQALVDAFGDD 249

Query: 278 ---RRLSEIFDGFEEAPV-ASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIR 333
              R L       +E  V  SGS AQV++ ++         +   VAVKV HP   + + 
Sbjct: 250 YEHRGLVLRRGRNDEGTVIGSGSAAQVYKGTMTHVTDSGSYEK-TVAVKVLHPNTKQLVE 308

Query: 334 RDFVIINLAAK-ISSVIP--AVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRR 390
           RD  ++   A  I  ++P   VK L L  + + F+  +  Q DL  E  +L  F  NF +
Sbjct: 309 RDLALMQCTADLIDRLVPIQMVKMLSLPRAAKTFSDVLRQQTDLRIEGRNLITFRENF-Q 367

Query: 391 WKD----VSFPKPVYPLVHPAVLVETYEQGE-CVSRY-VDELQGHERLKSALAHIGTHAL 444
             D    + FP+P    V   VLVE +  G   +S Y +D+ +   +++  LA     A 
Sbjct: 368 CDDGTVRIVFPRPEEGWVSERVLVEDFMDGAVSISAYLLDDSEVGRKIRKKLAGPLLRAF 427

Query: 445 LKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLV 504
           LKM+  DNF+H+D+HPGN+LV+  +   S K   R+   ++FLD G++  L   DR NL 
Sbjct: 428 LKMVFTDNFLHSDLHPGNVLVKATK---SSKNPLRTNYTLVFLDAGISTSLRPNDRKNLK 484

Query: 505 EFFKAVARRDGRTAAECTLRLSKQQNC---PNPKAFI-----EEVDEAFAFWGTPEGDLV 556
           + F+A+   DG  A    +  ++ + C   P  K F      E VDE   F       L 
Sbjct: 485 DLFRAIVMNDGYKAGSLMVERARYERCSSLPEGKHFFASGVAEIVDE---FHDRKREGLT 541

Query: 557 HPAECMQQLLEKV----RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
             A  +  LL +V    R + V +D  + +V+V+ LVLEG  R LDP  N+M
Sbjct: 542 LGAVRIGALLARVLDLCRTYGVEIDPEMSSVVVSMLVLEGLGRSLDPDLNLM 593


>gi|351701512|gb|EHB04431.1| hypothetical protein GW7_11846 [Heterocephalus glaber]
          Length = 772

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 144/492 (29%), Positives = 218/492 (44%), Gaps = 98/492 (19%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E AGP  IK GQWA+TR DLF    C   S LH +   H +A+T++ + +AFG     + 
Sbjct: 282 EAAGPTCIKLGQWASTRRDLFSEAFCAHFSRLHVRVAPHPWAHTERFLRQAFGDDWGRVL 341

Query: 285 DGFEEAPVASGSIAQVHRA-------------------------SLR--FRYPGQKVKP- 316
                 PV SG +AQV++A                         +LR  F   G++ +P 
Sbjct: 342 FFETREPVGSGCVAQVYKAFASPALLEQSDARGRGEPSGAGATEALRALFGGLGKERRPP 401

Query: 317 -------------------------IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPA 351
                                    + VAVKV HPG+   ++ D +++ + ++   ++P 
Sbjct: 402 GNLADQALLEQLLLPTTAPSGPHGLVPVAVKVLHPGLLSQVQVDLLLLKMGSQALGLLPG 461

Query: 352 VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVE 411
           V+WL L E V++F   M  Q+DL  EA +L  F  NF+    V FP P+ P V   VLVE
Sbjct: 462 VQWLSLLEIVEEFEKLMTQQIDLRYEARNLEHFQRNFQDVTSVRFPTPLRPFVTRDVLVE 521

Query: 412 TYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKK 471
           TYE+   VS Y       E LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+     
Sbjct: 522 TYEESVPVSSYQRAGIPAE-LKQRIARLGINMLLKMIFVDNFVHADLHPGNILVQGTDGL 580

Query: 472 S-SQKRLFRSKPHV------------IFLDVGMTAELSKTDRVNLVEFFKAVARR----- 513
           S   ++L    P V            + LD G+ AEL   D  N    F AV        
Sbjct: 581 SPGLEQLDVCDPLVVAVAPALCPLRLVLLDAGIVAELQAADLRNFRAVFLAVVLGQGTVP 640

Query: 514 ------------------------DGRTAAECTLRLSKQQNCPNPKAFIEEVDEAF--AF 547
                                    GR  AE  LR ++   C + + F  E+      A 
Sbjct: 641 RALFYGQPVLWTAQLEQAAFVGIFQGRRVAELILRHARASECRDVEGFKVEMAALVTQAR 700

Query: 548 WGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
             +   + +H +  +  + + +  H+V ++ N  +++   +VLEG  R LDP  ++++  
Sbjct: 701 RNSVTLEKLHVSRLLSSVFKLLMTHKVKLESNFASIVFAIMVLEGLGRSLDPKLDILEAA 760

Query: 608 QTLLLKADWAKS 619
           +  LL    A++
Sbjct: 761 RPFLLPGSMARA 772


>gi|307181423|gb|EFN69018.1| Uncharacterized aarF domain-containing protein kinase 2 [Camponotus
           floridanus]
          Length = 441

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/432 (30%), Positives = 201/432 (46%), Gaps = 79/432 (18%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           +E  GP FIK+GQW +TR D+F  ++C  LS L   A  HS+ YT++ +E  +G    ++
Sbjct: 52  VEFLGPIFIKFGQWISTRRDIFSPEICDTLSRLQRNAMPHSWPYTERLLEATYGSSWRDL 111

Query: 284 FDGFE-EAPVASGSIAQVHRASLRF----RYP-----------GQKVKPI---------- 317
           F  F+ E  + SG  AQV++A +      R P            +  +P+          
Sbjct: 112 FAKFDDEGLIGSGCCAQVYKAWIDLNAVARKPRMSRFTENKAFNENDEPMSTSPRARKLQ 171

Query: 318 VVAVKVRHPGVGESIRRDFVIINLAAKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAR 376
            VAVKV HPG+   ++RD  I+   +K +   +P + WL L + + +FA  M  QVD+  
Sbjct: 172 AVAVKVLHPGIKGQLKRDIAIMRGLSKCAMYFVPELHWLSLTDCIDEFARIMEDQVDMRL 231

Query: 377 EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSAL 436
           EA +L+RF  NF R  D+ FP P   L    +LVE++ +G  +S Y+        L+  L
Sbjct: 232 EATNLARFSANFSRRNDIVFPYPYMHLTRRRILVESFHEGSPISDYLQ--HDDVALQKKL 289

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILV-RVAQKKSSQKRLFR--------SKPHVIFL 487
           A IG   +LKM+  DNFIH D+HPGNILV +    K      FR          P +I L
Sbjct: 290 ARIGIATILKMIFNDNFIHCDLHPGNILVEKAVVPKVGLFNTFRRIIDPDYVDGPRLIIL 349

Query: 488 DVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAF 547
           D G+   L+   R NL + F +V   +                                 
Sbjct: 350 DCGLVVSLNDRCRRNLRDVFYSVLMGN--------------------------------- 376

Query: 548 WGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
                   V+ +  + +L   + RHRV  DG+  +V+++ LV+EG  R LDP  ++   +
Sbjct: 377 --------VNVSTVVSELFSAMVRHRVKQDGSFSSVILSMLVIEGLGRCLDPNIDIFAEI 428

Query: 608 QTLLLKADWAKS 619
              +L + +  S
Sbjct: 429 LPFVLGSMYNDS 440


>gi|345563586|gb|EGX46574.1| hypothetical protein AOL_s00097g644 [Arthrobotrys oligospora ATCC
           24927]
          Length = 733

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/330 (37%), Positives = 170/330 (51%), Gaps = 45/330 (13%)

Query: 179 VECVILLMRALYLGVLFSPSIMMAPFADSFGPQF---------RELWLHVVLRTLETAGP 229
           +E V   +R L+L +LF P ++  P A   GP+             W   +++++E AGP
Sbjct: 147 LEPVATGLRFLHLALLFLPVMITMP-AIWIGPRLPLQDGERAGTLWWYSYLVKSMEMAGP 205

Query: 230 AFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFE 288
            FIK GQWAA+R D+FP  +C  +S LHS    HS A TK+ IE AF GR    +F  FE
Sbjct: 206 TFIKLGQWAASRTDIFPMQMCFIMSTLHSNVAAHSLAKTKEIIEEAFSGRSFDTLFLEFE 265

Query: 289 EAPVASGSIAQVHRASLR-----------------FRYPGQK--------VKPIV----- 318
           E P+  G+IAQV+RA LR                  R+  Q+        VKP       
Sbjct: 266 ETPLGVGAIAQVYRAKLRRDLSPSLQSSRSTTPLSLRHSAQELLNKLDTFVKPTPSKAPS 325

Query: 319 --VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAR 376
             VA+KV HP V + + RD  I+ + A I + +P ++WL L + V +F   M  Q+DL  
Sbjct: 326 DWVAIKVLHPYVEQLVHRDLRIMKIFANIINSLPTLEWLSLPDEVDKFGEMMRLQLDLRI 385

Query: 377 EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSAL 436
           EA +L RF  NF+    V+FP P        VLVE +  G  +  ++    G    +   
Sbjct: 386 EANNLLRFRDNFKNRNTVTFPMPYMNFSTRQVLVEEFALGIPLEAFLK--NGGGVFQKQA 443

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILVR 466
           A +G  A L MLL+DNF HAD+HPGNIL+R
Sbjct: 444 ADMGLDAFLHMLLIDNFAHADLHPGNILIR 473



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 13/134 (9%)

Query: 481 KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQN--------CP 532
           K  +IF+D G+  ELS  +R N ++ F AVA  DG  A E  +   +Q +        C 
Sbjct: 550 KLQLIFIDTGLVTELSPINRRNFLDLFTAVAEFDGYRAGELMVSRCRQPSSVRDKDIFCL 609

Query: 533 NPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEG 592
             +  +  V       G      +  A+ + +++  +R H V ++G+   V+V+ L+LEG
Sbjct: 610 RMQHLVLGVKNKTFTLGK-----IKIADILSEVMSMIRSHHVRLEGDFINVVVSILLLEG 664

Query: 593 WQRKLDPGYNVMDT 606
             R+LDP  ++  +
Sbjct: 665 IGRRLDPNIDIFKS 678


>gi|348579235|ref|XP_003475386.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           2-like [Cavia porcellus]
          Length = 609

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 218/479 (45%), Gaps = 82/479 (17%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR-- 279
           +  E +GP  IK GQWA+TR DLF    C   S LH +   H +A+T++++++A G    
Sbjct: 132 KATEASGPTCIKLGQWASTRRDLFSEAFCAHFSRLHVRVAPHPWAHTERSLQQALGDNWG 191

Query: 280 ---------------LSEIFDGF------EEAPV-----ASGSIAQV------------- 300
                          +++++  F      E++P      ASG+   V             
Sbjct: 192 HVLFFETREPVGSGCVAQVYKAFASPALLEDSPARGPDEASGAGVVVALRELFGALGRER 251

Query: 301 ------------HRASLRFRYPGQKVKP---------IVVAVKVRHPGVGESIRRDFVII 339
                        R  L    PG +  P         + VAVKV HPG+   ++ D +++
Sbjct: 252 KHPGNLADQVLLERLLLPTANPGGRQTPDQAPRPHGLVQVAVKVLHPGLLSQVQVDLLLL 311

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
            + ++   ++P  +WL L E V++F   M  Q+DL  EA +L  F  NFR    V FP P
Sbjct: 312 KMGSRALGLLPGFQWLSLPEIVEEFEKLMTQQIDLRYEARNLEHFQRNFRDVASVKFPTP 371

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
           + P V   +LVETYE+   VS Y       E LK  +A +G + LLKM+ VDNF+HAD+H
Sbjct: 372 LRPFVTSDILVETYEESVPVSSYQQAGIPAE-LKQRIARLGINMLLKMIFVDNFVHADLH 430

Query: 460 PGNILVRVAQK-----KSSQKRLFRSKPHV------------IFLDVGMTAELSKTDRVN 502
           PGNILV+  +      ++  +++    P V            + LD G+ AEL   D  N
Sbjct: 431 PGNILVQGTEGLSLGHEAQLQQVGICDPLVAVVAPALCPLRLVLLDAGIVAELQAADLRN 490

Query: 503 LVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAF--AFWGTPEGDLVHPAE 560
               F AV    G   AE  L  ++   C + + F  E+      A   +   + +H + 
Sbjct: 491 FRAVFLAVVLGQGHRVAELILHHARASECRDVEGFKAEMAALVTQARKNSVTLEKLHVSS 550

Query: 561 CMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
            +  +   +  H+V ++ N  +++   +VLEG  R LDP  ++++  +  L+    A++
Sbjct: 551 LLSSVFRLLMTHKVKLESNFASIVFAIMVLEGLGRSLDPKLDILEAARPFLIPGPVARA 609


>gi|392894984|ref|NP_498150.2| Protein Y32H12A.7 [Caenorhabditis elegans]
 gi|371566278|emb|CCD73965.2| Protein Y32H12A.7 [Caenorhabditis elegans]
          Length = 580

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 227/491 (46%), Gaps = 68/491 (13%)

Query: 185 LMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDL 244
           + R + L + FSP ++  P        F  LW   +L +L+ +GP FIK GQWA+TR D+
Sbjct: 91  MFRCISLFLRFSPILLTYPLTKI--EAFENLWWRYLLWSLQHSGPTFIKLGQWASTRRDI 148

Query: 245 FPRDLCKKLSELHSKAPEHSFAYTKKTI-ERAFGRRL-----SEIFDGFEEAPVASGSIA 298
           F +  C +LS LH +     F   KK +    FG+        ++F   E   + SG IA
Sbjct: 149 FTKKFCDRLSVLHIQTKNKRFFRDKKKVMNEVFGKGFMKLHGKQVFLEIEPFSIGSGCIA 208

Query: 299 QVHRASLRF---------RYPGQKVKPIV-VAVKVRHPGVGESIRRDFVIINLAA-KISS 347
           QV+R ++            YP  K +    +A+KV    V + I  D  I+   A  +  
Sbjct: 209 QVYRGTVDISELEKATGKEYPELKGRTTQRIAIKVADKDVDKQIELDLSILRSGAWLMQH 268

Query: 348 VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPA 407
           ++PA+ +L    +++QF + +  QVDL  EA  L +F  NF   K+     P+       
Sbjct: 269 IVPALWYLDPTGALEQFEMVLRRQVDLRNEAKALKKFSDNFSS-KETGIKFPIVLGYTKN 327

Query: 408 VLVETYEQGECVSRYVDELQGHERL--------KSALAHIGTHALLKMLLVDNFIHADMH 459
           V+VET+E+G  ++R V E +G   L        +  +A +G  ALLKM+ VDNF+H D+H
Sbjct: 328 VIVETFEEGIYINRLVAE-EGQPELTARQSQAVRRRIALLGARALLKMIFVDNFVHGDLH 386

Query: 460 PGNILVRVAQKK-------------SSQKR---LFRS--------------------KPH 483
           PGNIL+R    +             S+ KR    FRS                    +P 
Sbjct: 387 PGNILIRFNDNEDNLRGVHKAPKADSALKRGLEWFRSLVNLRSAPRIRFTDSPDLEDEPT 446

Query: 484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDE 543
           ++ LD G+    +  +  NL   F++V  + G    +  L  S  Q C +P+ F  +V E
Sbjct: 447 LVLLDTGIAISETPKNLHNLKSLFRSVVEKRGYDVGKLLLHQSPFQQCNDPERFCRQV-E 505

Query: 544 AFAFWGTPEGDL--VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGY 601
                   E  L  ++ +  + ++   V  H+V +D    TV+++ +VLEG+ R LDP  
Sbjct: 506 KLVLKARSEKSLRTLNISALLSEMFTIVAEHKVELDSAFTTVILSVMVLEGFGRSLDPDL 565

Query: 602 NVMDTLQTLLL 612
           ++    +  LL
Sbjct: 566 DLFQCARPFLL 576


>gi|341883850|gb|EGT39785.1| hypothetical protein CAEBREN_12867 [Caenorhabditis brenneri]
          Length = 584

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 229/494 (46%), Gaps = 68/494 (13%)

Query: 185 LMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDL 244
           ++R + L + FSP ++  P        F  +W  ++L +++ +GP FIK GQWA+TR D+
Sbjct: 93  ILRCIGLFIRFSPLLITYPLTKI--EAFENIWWRILLWSVQNSGPTFIKLGQWASTRRDI 150

Query: 245 FPRDLCKKLSELHSKAPEHSFAYTKKTI-ERAFGRRL-----SEIFDGFEEAPVASGSIA 298
           F +  C +LS LH +     F   KK I  + FG+         +F   E   + SG IA
Sbjct: 151 FSKKFCDRLSVLHIQTKNKRFFRDKKKILNQVFGKEFMKMHGDRVFINIEPYSIGSGCIA 210

Query: 299 QVHRASLRF----RYPGQKVKPI------VVAVKVRHPGVGESIRRDFVIINLAAKI-SS 347
           QV+R  +      +  G+++          +A+KV    V + I  D  I+   A I   
Sbjct: 211 QVYRGVIDVGEFEKATGKQIPEFEGRATQKIAIKVAEKDVDKQIELDLSILRSGAWIMQQ 270

Query: 348 VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPA 407
           ++P++ +L    +++QF + +  QVDL+ EA  L +F  NF+  K+     P+       
Sbjct: 271 IVPSLWYLDPTGALEQFEMVLRRQVDLSNEAKALKKFSDNFKP-KETGIRFPIVLGYTEK 329

Query: 408 VLVETYEQGECVSRYV-----DELQGHERLKSA----LAHIGTHALLKMLLVDNFIHADM 458
            +VETYE+G  +++ V      ELQ   R   A    +A +G  ALLKM+ VDNF+H D+
Sbjct: 330 AIVETYEEGIYINKLVAEEGQPELQLTARQSQAVRRRIALLGARALLKMIFVDNFVHGDL 389

Query: 459 HPGNILVRVAQKKSSQKRL----------------FRS--------------------KP 482
           HPGNIL+R    +++ + +                FRS                    +P
Sbjct: 390 HPGNILIRFNDSENNLRGVHKAPKPENILKRGFDWFRSLVNWRSTPKIRFTDSPDLEDEP 449

Query: 483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVD 542
            ++ LD G+    +  +  NL   F++V  + G       L  S  Q C +P+ F  +V 
Sbjct: 450 TLVLLDTGIAISETPKNLHNLKSLFRSVVEKRGYEVGRLLLTQSPFQQCKDPERFCRQV- 508

Query: 543 EAFAFWGTPEGDL--VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPG 600
           E        E  L  ++ +  + ++   V  H+V +D    TV+++ +VLEG+ R LDP 
Sbjct: 509 EKLVLKARSEKSLRTLNISALLSEMFTIVAEHKVELDSAFTTVILSVMVLEGFGRSLDPD 568

Query: 601 YNVMDTLQTLLLKA 614
            ++    +  LL  
Sbjct: 569 LDLFQCARPYLLNV 582


>gi|342184495|emb|CCC93977.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
          Length = 530

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/392 (31%), Positives = 198/392 (50%), Gaps = 22/392 (5%)

Query: 215 LWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIER 274
           LWL  +L  +E+AGPAF+K GQW+ TR D+F  +      +L+     H +  + + ++ 
Sbjct: 98  LWLERLLYAVESAGPAFVKAGQWSCTRQDVFSPEFRSVFKKLYDGVDTHPYKVSLQILKE 157

Query: 275 AFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRR 334
              +   EIF   EE  V SGSI QVH A+L  R  G++     V VKV HP V E++ +
Sbjct: 158 ELQQDPDEIFTDIEEETVGSGSIGQVHGATL--RSTGER-----VVVKVMHPYVVETVVK 210

Query: 335 DFVIIN-LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKD 393
           DF IIN LA+ +   +P+++   L      +   + +Q+D   EA +L  F  NF+    
Sbjct: 211 DFFIINSLASLLHKYVPSLERYDLPALGLAWTTHLAAQLDFRVEARNLDLFRENFKNEPF 270

Query: 394 VSFPKPVYPLVHPAVLVETYEQGECVS-RYVDELQGHERLKSALAHIGTHALLKMLLVDN 452
           VSFPKP++      VLVET+ +GE  S  ++   + H R K  LAH G +   KMLL D 
Sbjct: 271 VSFPKPLFST--QRVLVETFCKGEPASVEFLAAQEEHARDK--LAHCGLNTWCKMLLHDR 326

Query: 453 FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR 512
           F+H DMHPGN+LV V+            +P V  +D G+  ++S+ + +      ++   
Sbjct: 327 FLHGDMHPGNVLVDVSDPH---------EPCVSLIDAGLCQQISEEESIATHNLMESFVH 377

Query: 513 RDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRH 572
                 +E  L +   Q   N + F  E+   F  W       V     +Q + E +R++
Sbjct: 378 WKADLCSEALLNMGAHQRYANKEKFRSEIRWLFDHWRPLHSKNVVVTNILQAVFECIRKN 437

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
            V++D    +++   LVLE +   L+P +N++
Sbjct: 438 EVHMDPPYVSLLFAVLVLESFIMNLNPDFNMV 469


>gi|299756174|ref|XP_001829144.2| atypical/ABC1/ABC1-C protein kinase [Coprinopsis cinerea
           okayama7#130]
 gi|298411557|gb|EAU92779.2| atypical/ABC1/ABC1-C protein kinase [Coprinopsis cinerea
           okayama7#130]
          Length = 537

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/277 (37%), Positives = 157/277 (56%), Gaps = 28/277 (10%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           +E AGP FIK  QWAA+R DLFP  LC++L  LHS+   H F++TKK +E  F R   ++
Sbjct: 1   MEAAGPTFIKLAQWAASRVDLFPPILCERLGALHSQGTPHPFSHTKKVVEAVFQRPFDQV 60

Query: 284 FDGFEEAPVASGSIAQVHRASL-------------RFRYPGQKVKPIV------------ 318
           F+ F++ P+ SG+IAQV+RA+L             R R  G  + PI+            
Sbjct: 61  FEEFDQTPIGSGAIAQVYRATLKRDLIPPSYHGPRRTRQVGGALGPIILEDPPPSAPTAS 120

Query: 319 VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREA 378
           VA+K+ HP V ++I RD  I++  A   S++P +KWL L E V  F   M  Q+DL  EA
Sbjct: 121 VAIKILHPRVEKTISRDLAIMHFFASCISLLPGMKWLSLPEEVLVFGEMMNQQLDLRHEA 180

Query: 379 AHLSRFIYNFR-RWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALA 437
            +L  F  NF  R   V+FP+P+       +LVE Y+    +  ++    G       +A
Sbjct: 181 DNLITFEANFAPRKVPVTFPRPLKIWSSKDILVEEYQNALPLETFLR--NGGGPYDYQIA 238

Query: 438 HIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ 474
            +G +A L MLL+DNF+H+D+HPGNI+++ ++  +++
Sbjct: 239 TVGLNAFLTMLLLDNFVHSDLHPGNIMIKFSKPPTTR 275



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 17/156 (10%)

Query: 482 PHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEV 541
           P ++F+D G+   L+ T+R N ++ FKAVA  DG    +  +  S+      P+  +++ 
Sbjct: 342 PEIVFIDAGLVTTLNDTNRTNFLDLFKAVAEFDGYKTGQLMIERSR-----TPELAVDK- 395

Query: 542 DEAFAFW----------GTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLE 591
            E FA             T     +  A+ +  +L+ VR+HRV ++ +    +++ L+LE
Sbjct: 396 -ETFALKMQHLILSIKRKTFSLGQIKIADLLTDVLKNVRKHRVKMEPDFINTVISILLLE 454

Query: 592 GWQRKLDPGYNVMDTLQTLLLKADWAKSLSYTIDGL 627
           G  R+LDP  ++  +   +L +     ++   ++GL
Sbjct: 455 GIGRQLDPKMDLFASALPILRQLGGQMAMDTKVEGL 490


>gi|340057460|emb|CCC51806.1| conserved hypothetical protein [Trypanosoma vivax Y486]
          Length = 530

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 193/396 (48%), Gaps = 22/396 (5%)

Query: 211 QFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKK 270
           ++  LWL ++L  ++ AGPAF+K GQW+ TR D+F  +      +L+     H +  + +
Sbjct: 94  EWYRLWLRILLAAVQRAGPAFVKAGQWSCTRQDIFSAEFRSVFKQLYDSVETHPYKVSLQ 153

Query: 271 TIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGE 330
            I         EIF   EE P+ SGSI QVH A+L  R  G++     V +KV HPGV E
Sbjct: 154 IIGDELQMDPGEIFSSIEEKPLGSGSIGQVHLATL--RDTGEQ-----VVIKVMHPGVVE 206

Query: 331 SIRRDFVIINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFR 389
           +I +DF I++ AA  +    P+++   L      +   + +Q+D   EA HL  F  NFR
Sbjct: 207 TIVKDFCIVSYAAALLHRWCPSLEKYDLPSLAHAWTTHLAAQLDFRLEAKHLDLFRENFR 266

Query: 390 RWKDVSFPKPVYPLVHPAVLVETYEQGE-CVSRYVDELQGHERLKSALAHIGTHALLKML 448
               V FPKP++      +LVET+ +GE     ++   + H R    LAH G +   KML
Sbjct: 267 NEPFVQFPKPIFSTQR--ILVETFCKGEPAFPEFLATQEEHAR--DILAHKGLNTWCKML 322

Query: 449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFK 508
           L D F+H DMHPGN+L+ V+            +P V  +D G+   ++  +        +
Sbjct: 323 LHDGFLHGDMHPGNVLIDVSDPH---------EPRVTLIDAGLCQTINAAEGSACHNLME 373

Query: 509 AVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEK 568
           A    D    A+  L +  +Q   + + F  ++   F  W       V  A  +Q + E 
Sbjct: 374 AFVHWDHNKCAQALLDMGSRQRYVDKEKFRRDLSWLFDHWRPSGSKDVVIANILQAVFEC 433

Query: 569 VRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
           +R + V +D    +++   LVLE +   L+P +N++
Sbjct: 434 IRENHVQMDPPYVSLLFAVLVLESFIMNLNPEFNMV 469


>gi|332026612|gb|EGI66721.1| Uncharacterized aarF domain-containing protein kinase 2 [Acromyrmex
           echinatior]
          Length = 432

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 195/416 (46%), Gaps = 78/416 (18%)

Query: 219 VVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGR 278
           ++ + +E  GP FIK GQW +TR D+FPRD+C  LS+L      HS+ YT++ +E  +G 
Sbjct: 36  ILRKGIEFLGPIFIKLGQWISTRWDIFPRDVCDMLSQLQRNVTPHSWQYTERILETTYGP 95

Query: 279 RLSEIFDGFEEA-PVASGSIAQVHRA-----------------------SLRFRYPGQKV 314
               +F  F++  P+ SG  AQV++A                       S +      + 
Sbjct: 96  SWRNLFVKFDDKEPIGSGCCAQVYKAWIDQNATWEPQISHFVDTKTLNESDKLASASPRT 155

Query: 315 KPI-VVAVKVRHPGVGESIRRDFVIINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQV 372
           + +  +AVKV HPG+ + ++RD  I+    K I   IP + WL L + + +FA  M +QV
Sbjct: 156 RNLQTIAVKVLHPGIEDQLKRDIAIMRGFCKFIMYFIPKLHWLSLTDCIDEFARIMENQV 215

Query: 373 DLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERL 432
           D+  EA++L +F  NF    D+ FP P   L H  +LVE++ +G  +S Y++       L
Sbjct: 216 DMRLEASNLVKFAGNFSNRNDIIFPYPYTHLTHRGILVESFHEGAPISDYLE--YDDAIL 273

Query: 433 KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLF---------RSKPH 483
           +  LA IG   +L+M+  DNFIH D+HPGNILV     K+S   +F              
Sbjct: 274 QRRLAKIGITMVLQMIFKDNFIHCDLHPGNILVEKTVPKASLFNIFWRAITSDCAEHDSR 333

Query: 484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDE 543
           +I LD G+   L++  R NL + F +V  ++                             
Sbjct: 334 LIILDCGLVVSLNERCRQNLRDVFYSVLTKN----------------------------- 364

Query: 544 AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDP 599
                       V+ +  + +L   +  H+V  D +   V+++ LV+E   R LDP
Sbjct: 365 ------------VNISTVVSELFSAMIHHQVKQDESFSGVILSILVIESLGRCLDP 408


>gi|268572191|ref|XP_002641258.1| Hypothetical protein CBG05169 [Caenorhabditis briggsae]
          Length = 497

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 230/497 (46%), Gaps = 75/497 (15%)

Query: 180 ECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAA 239
           +C+ L +R       FSP ++  P        F  +W  ++L +++ +GP FIK GQWA+
Sbjct: 10  KCIGLFLR-------FSPLLITYPLTKI--EAFENIWWKILLWSVQNSGPTFIKLGQWAS 60

Query: 240 TRPDLFPRDLCKKLSELHSKAPEHSFAYTK-KTIERAFGRRL-----SEIFDGFEEAPVA 293
           TR D+F +  C +LS LH +     F   K K I   FG+         +F   E   + 
Sbjct: 61  TRRDIFSKKFCDRLSVLHIQTKNKRFFRDKNKIINEVFGKGFMRHHGDRVFLEIEPYSIG 120

Query: 294 SGSIAQVHRASLRF----RYPGQKVKPIV------VAVKVRHPGVGESIRRDFVIINLAA 343
           SG IAQV+R  +      +  G+K+  +       +A+KV    V + I  D  I+   A
Sbjct: 121 SGCIAQVYRGVIDVEEFQKATGRKIPELNGRATQRIAIKVADKNVDQQIELDLSILRSGA 180

Query: 344 KI-SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
            I   ++P++ +L    +++QF + +  QVDL+ EA  L +F  NF   K+     P+  
Sbjct: 181 WIMQQIVPSLWYLDPQGALEQFEMVLRRQVDLSNEAKALKKFSENFHS-KETGIRFPIVL 239

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERL--------KSALAHIGTHALLKMLLVDNFI 454
                 +VET+E+G  +++ V E +G   L        +  +A +G  ALLKM+ VDNF+
Sbjct: 240 GYTKKAIVETFEEGIYINKLVAE-EGQPELTARQSVAVRRRIALMGARALLKMIFVDNFV 298

Query: 455 HADMHPGNILVRVAQKKSSQKRL----------------FRS------------------ 480
           H D+HPGNIL+R    +++ + +                FRS                  
Sbjct: 299 HGDLHPGNILIRFNDSENNLRGVHKAPKADGILKRGFEYFRSLINWRSAPKIRFTDSPDL 358

Query: 481 --KPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFI 538
             +P ++ LD G+    ++ +  NL   F++V  + G    +  L  S  Q C +P+ F 
Sbjct: 359 EDEPTLVLLDTGIAISETEKNLHNLKSLFRSVVEKRGYEVGKLLLTQSPFQQCKDPERFC 418

Query: 539 EEVDEAFAFWGTPEGDL--VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRK 596
            +V E        E  L  ++ +  + ++   V  H+V +D    TV+++ +VLEG+ R 
Sbjct: 419 RQV-EKLVLKARSEKSLRTLNISALLSEMFTIVAEHKVELDSAFTTVILSVMVLEGFGRS 477

Query: 597 LDPGYNVMDTLQTLLLK 613
           LDP  ++    +  LL 
Sbjct: 478 LDPDLDLFQCARPYLLN 494


>gi|154346632|ref|XP_001569253.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134066595|emb|CAM44393.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 531

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 215/442 (48%), Gaps = 22/442 (4%)

Query: 165 QDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTL 224
           ++G+  + S L +      +  R + L ++F P  ++  F  S   ++ + WL ++L  +
Sbjct: 49  ENGNLILESRLVTRPSHFAVWWRLVDLALIFIPLTVLY-FILSLRKEWHDRWLKMLLAAV 107

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           + AGP FIK GQW+ TR DLF  +       L+S+   H +  T + +          +F
Sbjct: 108 QRAGPVFIKIGQWSCTREDLFSPEFRNVFKRLYSEVDIHPYEDTLRILSEELKCDPFTVF 167

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-LAA 343
           D  +   V SGSI QVH A L  +   +K     V +KV HPG+ E+I  DF I+N LA 
Sbjct: 168 DSIQPETVGSGSIGQVHLAQL--KNSNRK-----VVIKVMHPGIIETIVLDFTILNSLAK 220

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            + +  P +   RL      F   + +Q+D   EA +L +F  NF+    V FP+P+  +
Sbjct: 221 MVDTWCPNLGRYRLPSLSLAFTTHLAAQLDFRIEAQNLEQFRENFKSEHYVEFPEPL--M 278

Query: 404 VHPAVLVETYEQGECVS-RYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
               +LVET+ +GE  +  ++  L  H R    LA+ G +   KMLL DNFIH DMHPGN
Sbjct: 279 STQRMLVETFCEGEPANPEFLASLPSHAR--DVLANKGLNTWCKMLLRDNFIHGDMHPGN 336

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           IL+               +P V  +DVG+  +L++ +     +  ++  R +    A+  
Sbjct: 337 ILIDTTSDP--------HEPRVTMIDVGLCQQLTEHEGAVTHDLMESFVRWNSNQCADSL 388

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCT 582
           L +S +Q      AF  ++ + F  +     D       +Q + E +R++ V +D    +
Sbjct: 389 LAMSDKQPYVESDAFRRDLADLFKHYRPTRNDENAVTNILQSVFESIRQNNVQMDTAYVS 448

Query: 583 VMVTTLVLEGWQRKLDPGYNVM 604
           ++   LVLE +   L+P +N++
Sbjct: 449 LLFAVLVLESFIMNLNPDFNMV 470


>gi|308497742|ref|XP_003111058.1| hypothetical protein CRE_04573 [Caenorhabditis remanei]
 gi|308242938|gb|EFO86890.1| hypothetical protein CRE_04573 [Caenorhabditis remanei]
          Length = 562

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 230/492 (46%), Gaps = 68/492 (13%)

Query: 184 LLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPD 243
           ++ R + L + FSP ++  P        F  +W  ++L +++ +GP FIK GQWA+TR D
Sbjct: 72  IIFRCIGLFLRFSPLLITYPLTKI--EAFENVWWRILLWSVQNSGPTFIKLGQWASTRRD 129

Query: 244 LFPRDLCKKLSELHSKAP-EHSFAYTKKTIERAFGRRL-----SEIFDGFEEAPVASGSI 297
           +F +  C +LS LH +   +  F   KK I   FG+         +F   E   + SG I
Sbjct: 130 IFSKKFCDRLSVLHIQTKRKRYFRDKKKIINEVFGKGFMKHHGDRVFLEIEPYSIGSGCI 189

Query: 298 AQVHRASLRF----RYPGQKVKPI------VVAVKVRHPGVGESIRRDFVIINLAAKI-S 346
           AQV+R  +      +  G+ +  +       +A+KV    V + I  D  I+   A I  
Sbjct: 190 AQVYRGVVDVAELEKATGRHIPELEGRSTQKIAIKVAEKDVDKQIELDLSILRSGAWIMQ 249

Query: 347 SVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHP 406
            ++P++ +L    +++QF + +  QVDL+ EA  L +F  NF+  K+     P+      
Sbjct: 250 QIVPSLWYLDPTGALEQFEMVLRRQVDLSNEAKALQKFSNNFQP-KETGIRFPIVLGYTK 308

Query: 407 AVLVETYEQGECVSRYVDELQGHERLKSA--------LAHIGTHALLKMLLVDNFIHADM 458
             +VETYE+G  +++ V E +G   L +         +A +G  ALLKM+ VDNF+H D+
Sbjct: 309 KAIVETYEEGIYINKLVAE-EGQPELTAKQSQAVRRRIALLGARALLKMIFVDNFVHGDL 367

Query: 459 HPGNILVRVAQKKSSQKRL----------------FRS--------------------KP 482
           HPGNIL+R    +++ + +                FRS                    +P
Sbjct: 368 HPGNILIRFNDSENNLRGVHKAPKAESIVKRGFDWFRSLVNWRSTPRIRFTDSPDLEDEP 427

Query: 483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVD 542
            ++ LD G+    +  +  NL   F++V  + G    +  L  S  Q C +P+ F  +V 
Sbjct: 428 TLVLLDTGIAISETPKNLHNLKSLFRSVVEKRGYDVGKLLLTQSPFQQCKDPERFCRQV- 486

Query: 543 EAFAFWGTPEGDL--VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPG 600
           E        E  L  ++ +  + ++   V  H+V +D    TV+++ +VLEG+ R LDP 
Sbjct: 487 EKLVLKARSEKSLRTLNISALLSEMFTIVAEHKVELDSAFTTVILSVMVLEGFGRSLDPD 546

Query: 601 YNVMDTLQTLLL 612
            ++    +  LL
Sbjct: 547 LDLFQCARPYLL 558


>gi|146105140|ref|XP_001469990.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|134074360|emb|CAM73110.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 532

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 207/420 (49%), Gaps = 22/420 (5%)

Query: 187 RALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFP 246
           R + L ++F P   +  F  S   ++ + WL ++L  ++ AGP F+K GQW+ TR DLF 
Sbjct: 71  RLVDLALIFIPVAALY-FIMSLRKEWYDRWLEMLLAAVQRAGPVFVKIGQWSCTREDLFA 129

Query: 247 RDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLR 306
            +       L+++   HS+  T + +          +F+  +   V SGSI QVH A L 
Sbjct: 130 PEFRNIFKRLYNEVDVHSYEDTLRILGEELKCDPLTVFESVQRETVGSGSIGQVHLAKL- 188

Query: 307 FRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLAAKISSVIPAVKWLRLDESVQQFA 365
            +   +K     V VKV HP + E+I  DF I+ NLA K+ +  P +   RL      F 
Sbjct: 189 -KNSNRK-----VVVKVMHPDIIETIVLDFTILDNLAKKVDAWFPHLARYRLPSLSLAFT 242

Query: 366 VFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS-RYVD 424
             + +Q+D   EA +L RF  NF+  + V FP+P+  +    +LVET+ +GE  +  ++ 
Sbjct: 243 THLAAQLDFRMEAQNLERFRENFKSERYVEFPEPL--MSTQRMLVETFCKGEPANPEFLA 300

Query: 425 ELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV 484
            L  H R    LA+ G +   KMLL DNFIH DMHPGNIL+               +P V
Sbjct: 301 SLPPHAR--DVLANKGLNTWCKMLLRDNFIHGDMHPGNILIDCTSDP--------HEPTV 350

Query: 485 IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEA 544
             +DVG+  +L++ +     +  ++  R +    A+  L +S  Q   N   F  ++ + 
Sbjct: 351 TMIDVGLCQQLTEHEGAVTHDLMESFVRWNSNQCADSLLAMSDSQPYANADLFRSDLADL 410

Query: 545 FAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
           F  +     D       +Q + E++R++ V +D    +++   LVLE +   L+P +N++
Sbjct: 411 FKHFRPTRNDENAVTNILQSVFERIRQNNVQMDPAYVSLLFAVLVLESFIMNLNPDFNMV 470


>gi|326679979|ref|XP_700849.4| PREDICTED: uncharacterized aarF domain-containing protein kinase
           2-like [Danio rerio]
          Length = 599

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 169/314 (53%), Gaps = 18/314 (5%)

Query: 317 IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAR 376
           I VA+KV HPG+ + ++ D +++   +   + +P VKWL L E V++F   M  Q+DL  
Sbjct: 281 IPVAIKVLHPGIRQQVQIDLILMKAGSLFLNCLPGVKWLSLPEIVEEFQKLMTKQIDLRF 340

Query: 377 EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSAL 436
           EA ++ +F  NF+  + V FP P+ P V   VLVETYE+ E +S+Y+        +K  +
Sbjct: 341 EAQNIEKFQKNFKDLEYVKFPTPLRPFVTRTVLVETYEESEPISKYLSS-NIPAGVKQRI 399

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRL------------FRSKP-- 482
           A +G   LLKM+ VDNF+H D+HPGNILV+ +  + S+ R              R+ P  
Sbjct: 400 ARMGVDLLLKMVFVDNFVHGDLHPGNILVQGSCGEESEDRATLTDLWDTVVVSMRATPPS 459

Query: 483 -HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEV 541
             ++ LD G+ A+LS+ D+ N    F AV  R G   AE  L  ++   C +   F +E+
Sbjct: 460 LQLVLLDAGIVAQLSEADQRNFRAVFTAVVLRQGERVAELILHHARANECQDVMRFKKEM 519

Query: 542 DEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDP 599
            E    A   T     +  AE + Q+   +  H+V ++ N  +++   +VLEG  R LDP
Sbjct: 520 AELVDRALSDTLSLGKIQVAELLSQVFGLLIHHKVKLESNFASMVFAIMVLEGLGRSLDP 579

Query: 600 GYNVMDTLQTLLLK 613
             ++++  + LLLK
Sbjct: 580 NLDILEMAKPLLLK 593



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 59/91 (64%)

Query: 216 WLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           WL  +L   ET+GP FIK GQWA+TR D+F +D C + S LH +   HS+++TK  ++RA
Sbjct: 120 WLDCLLWVTETSGPTFIKLGQWASTRRDIFSQDFCDRFSRLHVRVKAHSWSHTKLCLKRA 179

Query: 276 FGRRLSEIFDGFEEAPVASGSIAQVHRASLR 306
           FG    ++F    + PV SG +AQV+RA  +
Sbjct: 180 FGEGWRQMFVFDSKEPVGSGCVAQVYRAKAK 210


>gi|219129900|ref|XP_002185115.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403294|gb|EEC43247.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 428

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 200/427 (46%), Gaps = 56/427 (13%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           +++ GPAF+K  QW ATR D+FP  +C +LS LH +   HS+ YT + +  +FG      
Sbjct: 1   MQSLGPAFVKLCQWVATRRDIFPPHVCDRLSSLHDRGIPHSWKYTDQILRESFG------ 54

Query: 284 FDGFE--------EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD 335
             G+E        ++ +  GS AQV+  +L         +   VA+KV HP   + + RD
Sbjct: 55  -SGYETRGLKVDSQSVIGCGSAAQVYSGTLSTTLKDGTEERTPVAIKVLHPRFAQLVERD 113

Query: 336 FVIINLAAKISSVIP--AVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKD 393
              +   A +   +P   +K + L  + Q F   +  Q DL  E  +L  F  NF R ++
Sbjct: 114 LWFMQSIADLVHSLPFQHIKMVNLPRATQNFGAVLQRQADLRIEGNNLKTFRNNFYRNRE 173

Query: 394 ------VSFPKPVYPLVHPAVLVETY-EQGECVSRYV-DELQGHERLKSALAHIGTHALL 445
                 + FPKPV       +LVE        +S Y+ D     + ++  LA       L
Sbjct: 174 DEYNSAILFPKPVDEWTTRTILVEDLVRDATPISDYLRDSSDSGKEIRKELAGPLLRGFL 233

Query: 446 KMLLVDNFIHADMHPGNILVRVAQKK--------------SSQKRLFRSKPHVIFLDVGM 491
           KM+ +DNF+H D+HPGN+L++ +Q K              S     F  K  ++FLD G+
Sbjct: 234 KMVFLDNFVHCDLHPGNVLIQTSQVKPEPPTFLGFPLNPFSDTGEKFEIKRSIVFLDAGI 293

Query: 492 TAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA----- 546
              LS  D+ NL + F+AV   DG  A    +  +K + C    + +E   +AFA     
Sbjct: 294 ATSLSSNDQRNLKDLFRAVITNDGERAGRLMVERAKFERC----SLVEGGVDAFAGGIQE 349

Query: 547 ----FWGTPEGDLVHPAECMQQLLEKV----RRHRVNVDGNVCTVMVTTLVLEGWQRKLD 598
               F    +  L   A  +  LL +V    R H V +D  + +++++TLVLEG  R L+
Sbjct: 350 LVSEFHDRRKEGLTLGAVRIGSLLSRVLDLCRVHGVEIDPAMASIVISTLVLEGLGRSLE 409

Query: 599 PGYNVMD 605
           P  N++D
Sbjct: 410 PSLNLID 416


>gi|401420958|ref|XP_003874968.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322491204|emb|CBZ26469.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 532

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 207/420 (49%), Gaps = 22/420 (5%)

Query: 187 RALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFP 246
           R + L ++F P   +  F  S   ++ + WL ++L  ++ AGP F+K GQW+ TR DLF 
Sbjct: 71  RLVDLALIFIPVAALY-FIMSLRKEWYDRWLEMLLAAVQRAGPVFVKIGQWSCTREDLFA 129

Query: 247 RDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLR 306
            +       L+++   HS+  T + +          IF+  +   V SGSI QVH A L 
Sbjct: 130 PEFRNIFKRLYNEVDVHSYEDTLRILGEELKCDPLTIFESVQRETVGSGSIGQVHLAKL- 188

Query: 307 FRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLAAKISSVIPAVKWLRLDESVQQFA 365
            +   +K     V VKV HP + E+I  DF I+ NLA K+ +  P++   RL      F 
Sbjct: 189 -KNSNRK-----VVVKVMHPDIIETIVLDFAILDNLAKKVDAWFPSLARYRLPSLSLAFT 242

Query: 366 VFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS-RYVD 424
             + +Q+D   EA +L RF  NF+  + V FP+P+  +    +LVET+ +G+  +  ++ 
Sbjct: 243 THLAAQLDFRMEAQNLERFRENFKSERYVEFPEPL--MSTQRMLVETFCEGKPANPEFLA 300

Query: 425 ELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV 484
            L  H R    LA+ G +   KMLL DNFIH DMHPGNIL+               +P V
Sbjct: 301 SLPPHAR--DVLANKGLNTWCKMLLRDNFIHGDMHPGNILIDCTSDP--------HEPTV 350

Query: 485 IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEA 544
             +DVG+  +L++ +     +  ++  R +    A+  L +S  Q   N   F  ++ + 
Sbjct: 351 TMIDVGLCQQLTEHEGAVTHDLMESFVRWNSNQCADSLLAMSDSQPHANADLFRRDLADL 410

Query: 545 FAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
           F  +     D       +Q + E +R++ V +D    +++   LVLE +   L+P +N++
Sbjct: 411 FKHFRPTRNDENAVTNILQSVFESIRQNNVQMDPAYVSLLFAVLVLESFIMNLNPDFNMV 470


>gi|291236011|ref|XP_002737938.1| PREDICTED: aarF domain containing kinase 1-like [Saccoglossus
           kowalevskii]
          Length = 599

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/314 (35%), Positives = 164/314 (52%), Gaps = 34/314 (10%)

Query: 317 IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAR 376
           I VA+KV HPGV  ++ RD  ++   A + S IP + +L L E V++F   +  Q+DL  
Sbjct: 301 IPVAIKVVHPGVYRNVSRDLKLLYFMANLLSYIPGLSYLSLREVVEEFEGLLTRQIDLRY 360

Query: 377 EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYV-DELQGHERLKSA 435
           EA +L RF  NF     V FPKP+ P V   V+VETYE+GEC+S+Y+ D     E L++ 
Sbjct: 361 EAKNLERFNVNFSDVSCVKFPKPIRPYVRKDVMVETYEEGECISKYLNDNENSSEELRNK 420

Query: 436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKR------------LFRSKP- 482
           LA +   ALLKM+ VDNF+HAD+HPGNILV  A   + Q+             +   KP 
Sbjct: 421 LADMAIDALLKMVFVDNFVHADLHPGNILVHGASDFNPQQENIMTLVDICDTVIINVKPV 480

Query: 483 ----HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFI 538
                +I LD G+T+EL + DR N    F AV   DG   A+  L  +  + C +   F 
Sbjct: 481 PCPVKLILLDTGITSELEEEDRWNFEGVFTAVVLGDGEKVADLFLHHACAKECEDVDKFK 540

Query: 539 EEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLD 598
           +E+             LV  A      L KV+     ++ N  ++++  +VLEG  R L+
Sbjct: 541 KEM-----------STLVREATKNTLNLSKVK-----LESNFASMVLAIMVLEGLGRSLN 584

Query: 599 PGYNVMDTLQTLLL 612
           P  ++M   + +LL
Sbjct: 585 PNLDIMAAAKAVLL 598



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/100 (44%), Positives = 67/100 (67%), Gaps = 4/100 (4%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P F++ WL  +L  +E +GP FIK GQW++TR DLF ++ C   S+LH+ AP HS+ +TK
Sbjct: 134 PSFKQKWLRYLLFAVECSGPTFIKLGQWSSTRRDLFSQEFCDCFSKLHNNAPPHSWFFTK 193

Query: 270 KTIERAFGRRLSEIF---DGFEEAPVASGSIAQVHRASLR 306
           K +E++FG +  +IF   D   +A V SG I QV++A ++
Sbjct: 194 KKLEKSFGNKWRDIFVKIDNKRQA-VRSGCIGQVYKAYMK 232


>gi|398025172|ref|XP_003865747.1| hypothetical protein, conserved [Leishmania donovani]
 gi|322503984|emb|CBZ39071.1| hypothetical protein, conserved [Leishmania donovani]
          Length = 532

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 207/420 (49%), Gaps = 22/420 (5%)

Query: 187 RALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFP 246
           R + L ++F P   +  F  S   ++ + WL ++L  ++ AGP F+K GQW+ TR DLF 
Sbjct: 71  RLVDLALIFIPVAALY-FIMSLRKEWYDRWLEMLLAAVQRAGPVFVKIGQWSCTREDLFA 129

Query: 247 RDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLR 306
            +       L+++   HS+  T + +          +F+  +   V SGSI QVH A L 
Sbjct: 130 PEFRNIFKRLYNEVDVHSYEDTLRILGEELKCDPLTVFESVQRETVGSGSIGQVHLAKL- 188

Query: 307 FRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLAAKISSVIPAVKWLRLDESVQQFA 365
            +   +K     V VKV HP + E+I  DF I+ NLA K+ +  P +   RL      F 
Sbjct: 189 -KNSNRK-----VVVKVMHPDIIETIVLDFTILDNLAKKVDAWFPHLARYRLPSLSLAFT 242

Query: 366 VFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS-RYVD 424
             + +Q+D   EA +L RF  NF+  + V FP+P+  +    +LVET+ +GE  +  ++ 
Sbjct: 243 THLAAQLDFRMEAQNLERFRENFKSERYVEFPEPL--MSTQRMLVETFCKGEPANPEFLA 300

Query: 425 ELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV 484
            L  H R    LA+ G +   KMLL DNFIH DMHPGNIL+               +P V
Sbjct: 301 SLPPHAR--DVLANKGLNTWCKMLLRDNFIHGDMHPGNILIDCTSDP--------HEPTV 350

Query: 485 IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEA 544
             +DVG+  +L++ +     +  ++  R +    A+  L +S  Q   +   F  ++ + 
Sbjct: 351 TMIDVGLCQQLTEHEGAVTHDLMESFVRWNSNQCADSLLAMSDSQPYADADLFRSDLADL 410

Query: 545 FAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
           F  +     D       +Q + E++R++ V +D    +++   LVLE +   L+P +N++
Sbjct: 411 FKHFRPTRNDENAVTNILQSVFERIRQNNVQMDPAYVSLLFAVLVLESFIMNLNPDFNMV 470


>gi|428184945|gb|EKX53799.1| hypothetical protein GUITHDRAFT_160930 [Guillardia theta CCMP2712]
          Length = 672

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 229/459 (49%), Gaps = 57/459 (12%)

Query: 183 ILLMRALYLGVLFSP-SIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATR 241
           I+  R L+L V F+P + +   +      + RE WL+ ++ T E AG +F K+GQW + R
Sbjct: 198 IVTKRLLFLIVTFTPFAFITFQYLMDQSEKTRERWLNSLVSTFEAAGCSFQKFGQWMSMR 257

Query: 242 PDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVH 301
           PD+ P D+ +  S+L     +H  A+ +  I+ + G+ + ++F+ F+  PVASG++AQVH
Sbjct: 258 PDMLPPDVIEAFSKLRE---DHDMAHNETVIQESLGKSIDDVFEFFDPRPVASGTVAQVH 314

Query: 302 RASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA-AKISSVIPAVKWLRLDES 360
           RA LR     Q  + + VAVK+RHP V   +   FV I+L  A ++++      L +   
Sbjct: 315 RARLRAEMT-QSGQAMDVAVKIRHPNV---VDETFVDIDLIFAFVNTLGEVAGHLTIPFK 370

Query: 361 VQQFAVFMMSQVDLAREAAHLSRFIYNFRRW-----------KDVSFPKPVYPLVHPAVL 409
             +F   +  QVD   E  +L++F  NF+             K++ FP+  + LV P++L
Sbjct: 371 KDEFHSVLQRQVDFRWEGYNLTKFGNNFKCLSYEEFADHDVSKEIFFPEVHHHLVSPSLL 430

Query: 410 VETYEQGECVSRYVDEL--------QGH-----------ERLKSALAHIGTHALLKMLLV 450
           VE++  G+ V++Y  EL        +G              +K  LA +    ++KM L 
Sbjct: 431 VESWAPGKTVAQYFSELGEGFVQISEGKGLRNPVFDKKVHTMKRELASLIYDGVMKMFLR 490

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV 510
           DN+IH D+H GNIL      K            V  LD G+   +    R    +F  ++
Sbjct: 491 DNYIHGDLHGGNILYSQQDGK------------VTILDAGVVVAIDPHWREKFHDFLFSL 538

Query: 511 ARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFW-----GTPEGDLVHPAECMQQL 565
              + RT  +  L  ++ +   + K+F +++      W       P G  V   + + ++
Sbjct: 539 CTGNVRTLTQRLLEFNEAKEV-DEKSFAQDIRATTEKWIGIGNRAPNGGPVMLGDFVGEI 597

Query: 566 LEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
           L K+++H +++ G+V + +VT  ++EG  ++LDP ++V+
Sbjct: 598 LFKIQKHHLHLRGDVASTIVTMSLVEGLVKQLDPEFDVV 636


>gi|380790333|gb|AFE67042.1| putative aarF domain-containing protein kinase 2 [Macaca mulatta]
 gi|383422689|gb|AFH34558.1| aarF domain containing kinase 2 [Macaca mulatta]
          Length = 626

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/342 (33%), Positives = 177/342 (51%), Gaps = 27/342 (7%)

Query: 295 GSIAQVHRASLRFRYPGQKVKP---IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPA 351
           GS A V +A    + PG +++P   I VAVKV HPG+   +  D +++ + +++  ++P 
Sbjct: 285 GSNAGVSQA----QVPGHQLEPGHLIPVAVKVLHPGLLAQVHMDLLLMKIGSRVLGLLPG 340

Query: 352 VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVE 411
           +KWL L E V++F   M+ Q+DL  EA +L  F  NF+  K V FP P+ P V   VLVE
Sbjct: 341 IKWLSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFQNVKAVKFPTPLRPFVTREVLVE 400

Query: 412 TYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKK 471
           TYE+   VS Y  +      LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A   
Sbjct: 401 TYEESVPVSSY-QQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGADSL 459

Query: 472 SSQKRLFRSKPHV-----------------IFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           SS + +   +  V                 + LD G+ AEL  +D  N    F AV    
Sbjct: 460 SSSREVQLQQADVCDTLVVAVPSSLCPLRLVLLDAGIVAELQASDLRNFRAVFMAVVMGQ 519

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRH 572
           G+  AE  L  ++   C + + F  E+      A   T   + +H +  +  + + +  H
Sbjct: 520 GQRVAELILHHARASECRDVEGFKTEMATLVTQARKNTITLEKLHVSSLLSSVFKLLMTH 579

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           +V ++ N  +++   +VLEG  R LDP  ++++  +  LL  
Sbjct: 580 KVKLESNFASIVFAIMVLEGLGRSLDPKLDILEAARPFLLTG 621



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 58/94 (61%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P    LWLH++L+  ET+GP +IK GQWA+TR DLF    C + S+LH +   H +A+T+
Sbjct: 124 PSVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWAHTE 183

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           + + +AFG     I       PV SG +AQV++A
Sbjct: 184 RFLRQAFGEDWGSILSFENREPVGSGCVAQVYKA 217


>gi|354481761|ref|XP_003503069.1| PREDICTED: uncharacterized aarF domain-containing protein kinase 2
           [Cricetulus griseus]
 gi|344238132|gb|EGV94235.1| Uncharacterized aarF domain-containing protein kinase 2 [Cricetulus
           griseus]
          Length = 618

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/325 (33%), Positives = 167/325 (51%), Gaps = 20/325 (6%)

Query: 309 YPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368
           YP +    I VAVKV HPG+   +  D +++ + ++   ++P VKWL L E V++F   M
Sbjct: 291 YPPKSDHLIPVAVKVLHPGLLTQVYMDLLLMKIGSQALGLLPGVKWLSLPEIVKEFEKLM 350

Query: 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG 428
           + Q DL  EA +L  F +NF     V FP P++PL+   +LVETYE+   VS Y  +   
Sbjct: 351 IQQTDLRYEARNLEHFQHNFENMASVKFPTPLHPLITRDILVETYEESVPVSSY-QQAGI 409

Query: 429 HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV---- 484
            E LK  +A +G + LLKM+ VDNF+H D+HPGNILV+ A   S    + + +  V    
Sbjct: 410 PEDLKRKIAQLGINMLLKMIFVDNFVHGDLHPGNILVQGADGLSPSLEIQQQQVDVSDTL 469

Query: 485 -------------IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNC 531
                        + LD G+ AEL  +D  N    F AVA   G   AE  L  ++   C
Sbjct: 470 VATIAPALCPLRLVLLDAGIVAELQASDLRNFQAVFLAVALGQGHKVAELILHHARANEC 529

Query: 532 PNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLV 589
            + + F EE+      A   T   + +H +  +  + + +  H+V ++ N  +++   +V
Sbjct: 530 KDVERFKEEMATLVTQARKNTLTLEKLHVSSLLSSVFKLLMTHKVKLESNFASIVFAIMV 589

Query: 590 LEGWQRKLDPGYNVMDTLQTLLLKA 614
           LEG  R LDP  +V++  +  LLK 
Sbjct: 590 LEGLGRSLDPKLDVLEAAKPFLLKG 614



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 70/123 (56%), Gaps = 1/123 (0%)

Query: 181 CVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAAT 240
           C+ L +RA  L   F P + + P      P    LWLH++L+  ET+GP +IK GQWA+T
Sbjct: 95  CLRLGLRAGVLLAKFFPLLFLYPLT-YLAPGLSTLWLHLLLKATETSGPTYIKLGQWAST 153

Query: 241 RPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQV 300
           R DLF    C + S+LH +   H +A+T+  + +AFG     +     + PV SG +AQV
Sbjct: 154 RRDLFSEAFCAQFSKLHVQVTPHPWAHTECLLRQAFGEDWGSLLFFDTQQPVGSGCVAQV 213

Query: 301 HRA 303
           ++A
Sbjct: 214 YKA 216


>gi|402865010|ref|XP_003896732.1| PREDICTED: uncharacterized aarF domain-containing protein kinase 2
           [Papio anubis]
          Length = 626

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/342 (33%), Positives = 178/342 (52%), Gaps = 27/342 (7%)

Query: 295 GSIAQVHRASLRFRYPGQKVKP---IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPA 351
           GS A V +A    + PG +++P   I VAVKV HPG+   +  D +++ + +++  ++P 
Sbjct: 285 GSNAGVSQA----QVPGHQLEPGHLIPVAVKVLHPGLLAQVHMDLLLMKIGSRVLGLLPG 340

Query: 352 VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVE 411
           +KWL L E V++F   M+ Q+DL  EA +L  F  NF+  K V FP P+ P V   VLVE
Sbjct: 341 IKWLSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFQNVKAVKFPTPLRPFVTREVLVE 400

Query: 412 TYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKK 471
           TYE+   VS Y  +      LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A   
Sbjct: 401 TYEESVPVSSY-QQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGADSL 459

Query: 472 SSQKR-----------LFRSKP------HVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           SS +            L  + P       ++ LD G+ AEL  +D  N    F AV    
Sbjct: 460 SSSREAQLQQADVCDTLVVAVPSSLCPLRLVLLDAGIVAELQASDLRNFRAVFMAVVMGQ 519

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRH 572
           G+  AE  L  ++   C + + F  E+      A   T   + +H +  +  + + +  H
Sbjct: 520 GQRVAELILHHARASECRDVEGFKTEMATLVTQARKNTITLEKLHVSSLLSSVFKLLMTH 579

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           +V ++ N  +++   +VLEG  R LDP  ++++  +  LL  
Sbjct: 580 KVKLESNFASIVFAIMVLEGLGRSLDPKLDILEAARPFLLTG 621



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 71/120 (59%), Gaps = 1/120 (0%)

Query: 184 LLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPD 243
           L +RA  L V F P +++ PF     P    LWLH++L+  ET+GP +IK GQWA+TR D
Sbjct: 99  LWLRAGALLVKFFPLLLLYPFT-YLAPSVSTLWLHLLLKATETSGPTYIKLGQWASTRRD 157

Query: 244 LFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           LF    C + S+LH +   H +A+T++ + +AFG     I       PV SG +AQV++A
Sbjct: 158 LFSEAFCAQFSKLHVRVTPHPWAHTERFLRQAFGEDWGSILSFENREPVGSGCVAQVYKA 217


>gi|32261307|ref|NP_443085.2| uncharacterized aarF domain-containing protein kinase 2 [Homo
           sapiens]
 gi|74723374|sp|Q7Z695.1|ADCK2_HUMAN RecName: Full=Uncharacterized aarF domain-containing protein kinase
           2
 gi|31872130|gb|AAP60021.1| putative ubiquinone biosynthesis protein AarF [Homo sapiens]
 gi|51094779|gb|EAL24025.1| aarF domain containing kinase 2 [Homo sapiens]
 gi|119604362|gb|EAW83956.1| aarF domain containing kinase 2, isoform CRA_a [Homo sapiens]
          Length = 626

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/339 (33%), Positives = 173/339 (51%), Gaps = 21/339 (6%)

Query: 295 GSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKW 354
           GS A V RA +    P +    I VAVKV HPG+   +  D +++ + +++  V+P +KW
Sbjct: 285 GSNAGVSRAQVPGHQP-EATNLISVAVKVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKW 343

Query: 355 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE 414
           L L E V++F   M+ Q+DL  EA +L  F  NFR  K V FP P+ P V   VLVETYE
Sbjct: 344 LSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYE 403

Query: 415 QGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ 474
           +   VS Y  +      LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A   SS 
Sbjct: 404 ESVPVSSY-QQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGANGLSSS 462

Query: 475 KR-----------LFRSKP------HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
           +            L  + P       ++ LD G+ AEL   D  N    F AV    G+ 
Sbjct: 463 QEAQLQQADICDTLVVAVPSSLCPLRLVLLDAGIVAELQAPDLRNFRAVFMAVVMGQGQR 522

Query: 518 AAECTLRLSKQQNCPNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
            AE  L  ++   C + + F  E+      A   T   + +H +  +  + + +  H+V 
Sbjct: 523 VAELILHHARASECRDVEGFKTEMAMLVTQARKNTITLEKLHVSSLLSSVFKLLMTHKVK 582

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           ++ N  +++   +VLEG  R LDP  ++++  +  LL  
Sbjct: 583 LESNFASIVFAIMVLEGLGRSLDPKLDILEAARPFLLTG 621



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 57/94 (60%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P    LWLH++L+  ET+GP +IK GQWA+TR DLF    C + S+LH +   H + +T+
Sbjct: 124 PSVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWTHTE 183

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           + + +AFG     I       PV SG +AQV++A
Sbjct: 184 RFLRQAFGDDWGSILSFENREPVGSGCVAQVYKA 217


>gi|109068464|ref|XP_001082263.1| PREDICTED: uncharacterized aarF domain-containing protein kinase 2
           isoform 2 [Macaca mulatta]
          Length = 626

 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 113/342 (33%), Positives = 176/342 (51%), Gaps = 27/342 (7%)

Query: 295 GSIAQVHRASLRFRYPGQKVKP---IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPA 351
           GS A V +A    + PG +++P   I VAVKV HPG+   +  D +++ + +++  ++P 
Sbjct: 285 GSNAGVSQA----QVPGHQLEPGHLIPVAVKVLHPGLLAQVHMDLLLMKIGSRVLGLLPG 340

Query: 352 VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVE 411
           +KWL L E V++F   M+ Q+DL  EA +L  F  NF+  K V FP P+ P V   VLVE
Sbjct: 341 IKWLSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFQNVKAVKFPTPLRPFVTREVLVE 400

Query: 412 TYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKK 471
           TYE+   VS Y  +      LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A   
Sbjct: 401 TYEESVPVSSY-QQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGADSL 459

Query: 472 SSQKRLFRSKPHV-----------------IFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           SS +     +  V                 + LD G+ AEL  +D  N    F AV    
Sbjct: 460 SSSREAQLQQADVCDTPVVAVPSSLCPLRLVLLDAGIVAELQASDLRNFRAVFMAVVMGQ 519

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRH 572
           G+  AE  L  ++   C + + F  E+      A   T   + +H +  +  + + +  H
Sbjct: 520 GQRVAELILHHARASECRDVEGFKTEMATLVTQARKNTITLEKLHVSSLLSSVFKLLMTH 579

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           +V ++ N  +++   +VLEG  R LDP  ++++  +  LL  
Sbjct: 580 KVKLESNFASIVFAIMVLEGLGRSLDPKLDILEAARPFLLTG 621



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 58/94 (61%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P    LWLH++L+  ET+GP +IK GQWA+TR DLF    C + S+LH +   H +A+T+
Sbjct: 124 PSVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWAHTE 183

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           + + +AFG     I       PV SG +AQV++A
Sbjct: 184 RFLRQAFGEDWGSILSFENREPVGSGCVAQVYKA 217


>gi|157877796|ref|XP_001687197.1| conserved hypothetical protein [Leishmania major strain Friedlin]
 gi|68130272|emb|CAJ09584.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 532

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 205/420 (48%), Gaps = 22/420 (5%)

Query: 187 RALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFP 246
           R + L ++F P   +  F  S   ++ + WL ++L  ++ AGP F+K GQW+ TR DLF 
Sbjct: 71  RLVDLALIFIPVAALY-FIMSLRKEWYDRWLEMLLAAVQRAGPVFVKIGQWSCTREDLFA 129

Query: 247 RDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLR 306
            +       L+++   HS+  T + +          +F+  +   V SGSI QVH A L 
Sbjct: 130 PEFRNIFKRLYNEVDVHSYEDTLRILGEELRCDPLTVFESVQRETVGSGSIGQVHLAKL- 188

Query: 307 FRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLAAKISSVIPAVKWLRLDESVQQFA 365
            +   +K     V VKV HP + E+I  DF I+ N+A K+ +  P +   RL      F 
Sbjct: 189 -KNSNRK-----VVVKVMHPDIIETIVLDFTILDNMAKKVDAWFPHLARYRLPSLSLAFT 242

Query: 366 VFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS-RYVD 424
             + +Q+D   EA +L RF  NF+  + V FP+P+  +    +LVET+ +GE  +  ++ 
Sbjct: 243 THLAAQLDFRMEAQNLERFRENFKSERYVEFPEPL--MSTQRMLVETFCEGEPANPEFLA 300

Query: 425 ELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV 484
            L  H R    LA+ G +   KMLL DNFIH DMHPGNIL+               +P V
Sbjct: 301 SLPPHAR--DVLANKGLNTWCKMLLRDNFIHGDMHPGNILIDCTSDP--------HEPTV 350

Query: 485 IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEA 544
             +DVG+  +L++ +     +  ++  R +    A+    +S  Q   +   F  ++ + 
Sbjct: 351 TMIDVGLCQQLTEHEGAVTHDLMESFVRWNSNQCADSLFAMSDSQPYADADLFRRDLADL 410

Query: 545 FAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
           F  +     D       +Q + E +R++ V +D    +++   LVLE +   L+P +N++
Sbjct: 411 FKHFRPTRNDENAVTNILQSVFESIRQNNVQMDPAYVSLLFAVLVLESFIMNLNPDFNMV 470


>gi|428181788|gb|EKX50651.1| hypothetical protein GUITHDRAFT_103878 [Guillardia theta CCMP2712]
          Length = 636

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 226/500 (45%), Gaps = 70/500 (14%)

Query: 182 VILLMRALYLGVLFSP---SIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWA 238
           V ++ R   L + F+P     ++ P    + P FR  +L +++++ E AG +F K GQW 
Sbjct: 133 VFIVKRIFTLAITFTPLAICTILEPILSRY-PSFRGWYLQLMVKSFERAGCSFQKIGQWL 191

Query: 239 ATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIA 298
           + RPDL   D+ + LS L    P+HSF +++  IE AFG RL ++F+  +  P+ASGSIA
Sbjct: 192 SMRPDLLSPDVIEALSALRDDGPKHSFEHSRHEIEAAFGARLEDVFEYVDPVPIASGSIA 251

Query: 299 QVHRASLRFRY----PGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKW 354
           QVH+A LR  Y      + +    VA+KVRHP V ES   D  II     I+  + A   
Sbjct: 252 QVHKAKLRSEYMQSHGMEDLGFQEVAIKVRHPEVLESTWVDADIIFNFFGIAGKVFANYD 311

Query: 355 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE 414
           + +    + F   M+ Q+DL  EA +L +F  NF+    + FP   +     +VLVE++ 
Sbjct: 312 MAMPFDKKGFYSSMVRQLDLNWEAYNLRQFQENFQGEHRIVFPLVAHST--ESVLVESWI 369

Query: 415 QGECVSRYVDELQGH------------------ERLKSALAHIGTHALLKMLLVDNFIHA 456
            G+ V++  + + G                   E+ K  LA       +KM L DN+IH 
Sbjct: 370 NGQSVAKLFEAVDGQDFSVTPKGAHRTAGEMMEEKRKKKLAQDIFDMTIKMYLRDNYIHG 429

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPH---VIFLDVGMTAELSKTDRVNLVEFFKAVARR 513
           D+H GN+             ++ + PH   +  LD G+T  L K           A+   
Sbjct: 430 DLHGGNL-------------MYSTDPHDDRIYVLDAGLTTALEKDWASPFGYLLHALTTG 476

Query: 514 DGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPE------GDLVHPAEC------ 561
           D   AA+  L  +K     +  AF  E+ +    +          G   H  E       
Sbjct: 477 DADKAADKLLMFNKSTAPLDVHAFKSELKDVMNLYMPSSSRHHVAGHEEHKQETKGPINL 536

Query: 562 ---MQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL----------- 607
              +  +L  + +H +N+ G+V   +VT  + EG  R+LDP ++V+ +            
Sbjct: 537 GAMIGHILSTLYKHNINLRGDVAITIVTMSISEGLIRQLDPEFDVVRSALPYFVRFRSWQ 596

Query: 608 QTLLLKADWAKSLSYTIDGL 627
           +  L   DW+K +     GL
Sbjct: 597 RPSLTGKDWSKEVEGANGGL 616


>gi|260812275|ref|XP_002600846.1| hypothetical protein BRAFLDRAFT_214912 [Branchiostoma floridae]
 gi|229286136|gb|EEN56858.1| hypothetical protein BRAFLDRAFT_214912 [Branchiostoma floridae]
          Length = 495

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/316 (33%), Positives = 168/316 (53%), Gaps = 34/316 (10%)

Query: 317 IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAR 376
           I VA+KV HPG+  +++RD  I++  A +   +P +KWL L E V +F   +MSQ+DL  
Sbjct: 195 IPVAIKVLHPGLYRTVKRDLSIMSGIAWLLEWVPGLKWLSLSEIVSEFGDLIMSQIDLRH 254

Query: 377 EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSAL 436
           EAA+L RF   F     + FPKP+ P V   +LVET+E G+ ++ ++ +    E LK+ L
Sbjct: 255 EAANLERFKDYFADIDAIRFPKPIRPYVRRDILVETFEDGDPITNFMTD-DNSECLKAKL 313

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQK------------RLFRSKP-- 482
           A +G  ALLKM+ VDNF+H D+HPGNILV  A   + ++             +   KP  
Sbjct: 314 AEMGIEALLKMIFVDNFVHGDLHPGNILVMNADSYNPEQCNKMMLVDMCDTVIVNVKPVE 373

Query: 483 ---HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
               ++ LDVG+ AEL + DR+N  + F AV   +G   A+  L  ++   C +   F +
Sbjct: 374 NPIRLVLLDVGIIAELDEQDRLNFRDVFTAVVMGEGEQVADLILHHARANECKDVAQFKK 433

Query: 540 EVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDP 599
           E+            DLV  A      L +V+     ++ N   +++  +VLEG  R LDP
Sbjct: 434 EM-----------ADLVQTARENTVTLGQVK-----LESNFANMVLAIVVLEGLGRTLDP 477

Query: 600 GYNVMDTLQTLLLKAD 615
             ++++  + +LL  +
Sbjct: 478 NLDILEAAKPILLGTN 493



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 73/123 (59%), Gaps = 3/123 (2%)

Query: 186 MRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLF 245
           +R L+L   F P   + P   +   +F  LW  ++L  +E AGP FIK GQWA+TR DLF
Sbjct: 4   LRVLWLLYRFGPLFCVYPLTYT-SQRFTTLWWKLLLNAIEAAGPTFIKMGQWASTRRDLF 62

Query: 246 PRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEA--PVASGSIAQVHRA 303
             + C + S LH     HS+ +TK+ ++RAFG+   +IF  FE    P+ SG IAQV++A
Sbjct: 63  TDEFCDRFSRLHVHVKPHSWFFTKRRLQRAFGKNWRKIFVKFENMRRPIGSGCIAQVYKA 122

Query: 304 SLR 306
            +R
Sbjct: 123 YMR 125


>gi|355561054|gb|EHH17740.1| hypothetical protein EGK_14202 [Macaca mulatta]
          Length = 626

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/342 (33%), Positives = 178/342 (52%), Gaps = 27/342 (7%)

Query: 295 GSIAQVHRASLRFRYPGQKVKP---IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPA 351
           GS A V +A    + PG +++P   I VAVKV HPG+   +  D +++ + +++  ++P 
Sbjct: 285 GSNAGVSQA----QVPGHQLEPGHLIPVAVKVLHPGLLAQVHMDLLLMKIGSRVLGLLPG 340

Query: 352 VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVE 411
           +KWL L E V++F   M+ Q+DL  EA +L  F  NF+  K V FP P+ P V   VLVE
Sbjct: 341 IKWLSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFQNVKAVKFPTPLRPFVTREVLVE 400

Query: 412 TYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKK 471
           TYE+   VS Y  +      LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A   
Sbjct: 401 TYEESVPVSSY-QQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGADSL 459

Query: 472 SSQKR-----------LFRSKP------HVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           SS +            L  + P       ++ LD G+ AEL  +D  N    F AV    
Sbjct: 460 SSSREAQLQQADVCDTLVVAVPSSLCPLRLVLLDAGIVAELQASDLRNFRAVFMAVVMGQ 519

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRH 572
           G+  AE  L  ++   C + + F  ++      A   T   + +H +  +  + + +  H
Sbjct: 520 GQRVAELILHHARASECRDVEGFKTKMATLVTQARKNTITLEKLHVSSLLSSVFKLLMTH 579

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           +V ++ N  +++   +VLEG  R LDP  ++++  +  LL  
Sbjct: 580 KVKLESNFASIVFAIMVLEGLGRSLDPKLDILEAARPFLLTG 621



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 58/94 (61%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P    LWLH++L+  ET+GP +IK GQWA+TR DLF    C + S+LH +   H +A+T+
Sbjct: 124 PSVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWAHTE 183

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           + + +AFG     I       PV SG +AQV++A
Sbjct: 184 RFLRQAFGEDWGSILSFENREPVGSGCVAQVYKA 217


>gi|355667130|gb|AER93768.1| aarF domain containing kinase 2 [Mustela putorius furo]
          Length = 620

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 182/374 (48%), Gaps = 29/374 (7%)

Query: 261 PEHSFAYTKKTIERAFGRRLS-EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVV 319
           PE  + +     +++F  RL     D      V S S+A+ HR       P        V
Sbjct: 255 PEKGWGFQGSLADQSFLERLLLPEADLVGSNAVVSQSLARAHRPEPDHLIP--------V 306

Query: 320 AVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAA 379
           AVKV HPG+   ++ D +++ + +++ +++P VKWL L E V++F   M+ Q+DL  EA 
Sbjct: 307 AVKVLHPGLLAQVQMDLLLMKMGSRVLALLPGVKWLSLPEIVEEFEKLMVHQIDLRYEAR 366

Query: 380 HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHI 439
           +L  F  NF     V FP P+ P V   VLVETYE+   VS Y  +      LK  +A +
Sbjct: 367 NLEHFQCNFLNVNSVKFPTPLRPFVTRDVLVETYEESVPVSSY-QQAGIPTDLKKKIARL 425

Query: 440 GTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRL-----------------FRSKP 482
           G + LLKM+ VDNF+HAD+HPGNILV+ A   S  +                    R   
Sbjct: 426 GINMLLKMIFVDNFVHADLHPGNILVQGADGLSKSREAPLQQMDVCNTLVVAMTPARCPL 485

Query: 483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVD 542
            ++ LD G+ AEL   D  N    F AVA   G+  AE  L  ++   C + +AF  E+ 
Sbjct: 486 RLVLLDAGIVAELQAADLSNFRAVFMAVAMGQGQRVAELILHHARASECRDVEAFKAEMA 545

Query: 543 EAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPG 600
                A   T   + +  +  +  + + +  H+V ++ N  +++   +VLEG  R LDP 
Sbjct: 546 TLVTQARKNTITLEKLQVSSLLSNVFKLLMTHKVKLESNFASIVFAIMVLEGLGRSLDPK 605

Query: 601 YNVMDTLQTLLLKA 614
            ++++  +  LLK 
Sbjct: 606 LDILEAAKPFLLKG 619



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 1/118 (0%)

Query: 186 MRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLF 245
           +RA  L + F P ++  P      P    LWL+++L+  ET+GP +IK GQWA+TR DLF
Sbjct: 99  LRAGALLMKFFPLLLFYPLT-YLAPSVSSLWLYLLLKATETSGPTYIKLGQWASTRRDLF 157

Query: 246 PRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
               C + S+LH +   H + +T+  + +AFG    ++    ++ PV SG +AQV++A
Sbjct: 158 SEAFCAQFSKLHVRVTPHPWTHTEHFLRQAFGEDWGKVLCFEKKEPVGSGCVAQVYKA 215


>gi|157822891|ref|NP_001101325.1| aarF domain containing kinase 2 [Rattus norvegicus]
 gi|149065315|gb|EDM15391.1| aarF domain containing kinase 2 (predicted) [Rattus norvegicus]
          Length = 616

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/327 (33%), Positives = 168/327 (51%), Gaps = 23/327 (7%)

Query: 310 PGQKVKP---IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV 366
           PGQ  K    I VAVKV HPG+   +  D +++ + ++   +IP VKWL L E V++F  
Sbjct: 286 PGQPPKSDHLIPVAVKVLHPGLLSQVYIDLLLMKIGSQALGLIPGVKWLSLPEIVEEFEK 345

Query: 367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDEL 426
            M+ Q DL  EA +L  F +NF+    V FP P++PL+   +LVETYE+   VS Y  + 
Sbjct: 346 LMVQQTDLRYEAQNLEHFQHNFQNMASVKFPTPLHPLITRDILVETYEESVPVSSY-QQA 404

Query: 427 QGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV-- 484
                LK  +A +G + L KM+ VDNF+H D+HPGNILV+ A   SS   + + +  V  
Sbjct: 405 GVPTDLKRKIAQLGINMLFKMIFVDNFVHGDLHPGNILVQGADGVSSSLEMQQQQVDVYD 464

Query: 485 ---------------IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQ 529
                          + LD G+ A+L  +D  N    F AVA   G   AE  L  ++  
Sbjct: 465 TLVATIAPALCPLRLVLLDAGIVAKLQASDLRNFRAVFLAVAMGQGHRVAELMLHHAQAN 524

Query: 530 NCPNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTT 587
            C + + F  E+      A   T   + +H +  +  + + +  H+V ++ N  +++V  
Sbjct: 525 ECKDVEKFKAEMATLVTQARKNTLTLEKLHVSSLLSSVFKLLMTHKVKLESNFASIVVAI 584

Query: 588 LVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           +VLEG  R LDP  ++++  +  LLK 
Sbjct: 585 MVLEGLGRSLDPKLDILEAAKPFLLKG 611



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 11/149 (7%)

Query: 157 QNAFYTRAQDGHAFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADS--FGPQFRE 214
           +N     AQ+G       L  ++ C+ L +RA   GVL +  + +          P F  
Sbjct: 77  ENGLVKVAQEGP------LARILLCLCLGLRA---GVLLAKFLPLLFLYPLTYLAPGFST 127

Query: 215 LWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIER 274
           LWLH++ +  ET+GP +IK GQWA+TR DLF    C + S+LH +   H +A T+  +++
Sbjct: 128 LWLHLLFKATETSGPTYIKLGQWASTRRDLFSEAFCVQFSKLHVQVTPHPWARTEYLLQQ 187

Query: 275 AFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           AFG     I     + PV SG +AQV++A
Sbjct: 188 AFGEDWHSILFFETQEPVGSGCVAQVYKA 216


>gi|73978842|ref|XP_532750.2| PREDICTED: uncharacterized aarF domain-containing protein kinase 2
           [Canis lupus familiaris]
          Length = 626

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/348 (33%), Positives = 179/348 (51%), Gaps = 39/348 (11%)

Query: 295 GSIAQVHRASLRFRYPGQKVKP---IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPA 351
           GS A + +AS+    P  + KP   I VAVKV HPG+   ++ D +++ + +++ +++P 
Sbjct: 285 GSNAVMSQASV----PADQPKPDHLIPVAVKVLHPGLLSQVQMDLLLMKMGSRVLALLPG 340

Query: 352 VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVE 411
           +KWL L E V++F   M+ Q+DL  EA +L  F  NF     V FP P+ P V   VLVE
Sbjct: 341 IKWLSLPEIVEEFEKLMVHQIDLRYEARNLEHFQCNFLNVNSVKFPTPLRPFVTRDVLVE 400

Query: 412 TYEQGECVSRY------VDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILV 465
           TYE+   VS Y      VD       LK  +A +G + LLKM+ VDNF+HAD+HPGNILV
Sbjct: 401 TYEESVPVSSYQQAGIPVD-------LKKKIARLGINMLLKMIFVDNFVHADLHPGNILV 453

Query: 466 RVAQ--KKSSQKRL---------------FRSKPHVIFLDVGMTAELSKTDRVNLVEFFK 508
           + A    +S + +L                R    ++ LD G+ AEL  TD  N    F 
Sbjct: 454 QGADGLSRSQEAQLQQMDVCDTLVATMAPARCPLRLVLLDAGIVAELQATDLSNFRAVFL 513

Query: 509 AVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLL 566
           AVA   G+  AE  L  ++   C + + F  E+      A   T   + +  A  +  + 
Sbjct: 514 AVAMGQGQRVAELILHHARASECRDVEGFKAEMATLVTQARKDTITLEKLQVASLLSNVF 573

Query: 567 EKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           + +  H+V ++ N  +++   +VLEG  R LDP  ++++  +  LLK 
Sbjct: 574 KLLMTHKVKLESNFASIVFAIMVLEGLGRSLDPKLDILEAAKPFLLKG 621



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 1/118 (0%)

Query: 186 MRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLF 245
           +RA  L + F P ++  P      P    LWL+++L+  ET+GP +IK GQWA+TR DLF
Sbjct: 101 LRAGALLMKFFPLLLFYPLT-YLAPSVSGLWLYLLLKATETSGPTYIKLGQWASTRRDLF 159

Query: 246 PRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
               C + S+LH +   HS+ +T+  + +AFG     +    ++ PV SG +AQV++A
Sbjct: 160 SEAFCAQFSKLHVRVTPHSWTHTEHFLRQAFGEDWGRVLHFEKKEPVGSGCVAQVYKA 217


>gi|126340879|ref|XP_001375346.1| PREDICTED: uncharacterized aarF domain-containing protein kinase 2
           [Monodelphis domestica]
          Length = 622

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/313 (35%), Positives = 170/313 (54%), Gaps = 10/313 (3%)

Query: 310 PGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMM 369
           PG K   I  A+KV HPG+   ++ D V++   ++I  +IP +KWL L E V++F   M+
Sbjct: 303 PGPK-HLIPAAIKVLHPGLLSQVQVDLVLMKTGSQILGLIPGIKWLSLTEIVEEFEKLMV 361

Query: 370 SQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH 429
            Q+DL  EA +L  F  NF   K V FP P+ P V   VLVET+E+   VS Y  + +  
Sbjct: 362 QQIDLRYEARNLECFQNNFLDVKFVRFPTPLQPFVTRDVLVETFEESVPVS-YYQKSEIP 420

Query: 430 ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVA----QKKSSQKRLF-RSKP-H 483
            +LK  +A +G   LLKM+ VDNF+HAD+HPGNILV+ A    + +  QK L   S P  
Sbjct: 421 TKLKGRIAKLGIDMLLKMVFVDNFVHADLHPGNILVQGADFLKESQKGQKNLVDTSSPLK 480

Query: 484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDE 543
           ++ LD G+ A L  TD  N    F AVA   G   AE  L  ++   C + + F  E+ +
Sbjct: 481 LVLLDAGIVAGLQATDLQNFRAVFTAVAMGQGEKVAELILHHARANECQDVEKFKAEMAK 540

Query: 544 --AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGY 601
             A A   T   + +  +  +  + + +  H+V ++ N  +++   +VLEG  R LDP  
Sbjct: 541 LVAQARKNTITLEKLQVSNLLSSVFKLLMTHKVKLESNFASIIFAIMVLEGLGRSLDPKL 600

Query: 602 NVMDTLQTLLLKA 614
           ++++  +  L+K+
Sbjct: 601 DILEAAKPFLIKS 613



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 1/117 (0%)

Query: 187 RALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFP 246
           RA  L V F+P ++  P        F  +WL  +L   E++GP +IK GQWA+TR DLF 
Sbjct: 106 RACVLLVRFTPLLLFYPLTYPLH-SFSRIWLKWLLMATESSGPTYIKLGQWASTRRDLFS 164

Query: 247 RDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
            + C   S LH +   H + +T+  +++ FG    +      + PV SG +AQV++A
Sbjct: 165 EEFCSLFSRLHVRVAPHPWDHTQALLQKVFGEEWGQALLFESQEPVGSGCVAQVYKA 221


>gi|219129374|ref|XP_002184865.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403650|gb|EEC43601.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 569

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 209/438 (47%), Gaps = 31/438 (7%)

Query: 187 RALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFP 246
           R   L VL +P  ++ P +          W +  L ++E AGP +IK  QWA TR DLF 
Sbjct: 143 RIASLLVLAAPLTLLVPLSCVSERATAWSWAYA-LWSIEQAGPTYIKLVQWATTRQDLFS 201

Query: 247 RDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLR 306
            + C+   +L  +   H++  T  T+    G  +   F   E  P+ SG IAQV++  L 
Sbjct: 202 PEFCQYFGKLRDETTGHAWQATVDTLLEDLG--IGADFLQLETKPIGSGCIAQVYKGKLT 259

Query: 307 FRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIP--AVKWLRLDESVQQF 364
            +  G       +AVKV+HPG+ + +  DF I+  AA     IP   + +L L +SV+QF
Sbjct: 260 -QPSGPYPVGTDIAVKVQHPGIWDKVCVDFYILGKAAAWLERIPYLNLSYLSLADSVRQF 318

Query: 365 AVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVD 424
              M+ Q+DL  EA HL RF  +FR    V+FP+P+  L    VL ET+  G  +  Y  
Sbjct: 319 RDIMLPQLDLTLEANHLQRFNRDFRDDDRVAFPEPLKELTTTRVLTETFCHGTPILEYT- 377

Query: 425 ELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV 484
             +   +++  LA++G    LKM+ + +F+H D+HPGNILV    K   +  L       
Sbjct: 378 --KAPPKVREELAYLGLSTTLKMIFLHDFLHGDLHPGNILVSNTPKGDIKLNL------- 428

Query: 485 IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQ-QNCP-NPKAFIEEV- 541
             LD G+  E+     +NLV+   A  RRDGR A +  +  S   Q  P + + F+  + 
Sbjct: 429 --LDCGLVVEMGPEQHINLVKILGAFTRRDGRLAGQLMVDTSSHCQASPLDVELFVNGIE 486

Query: 542 ----DEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKL 597
               D+A   +    GD +    C    + KV+     ++ +     +   ++EG  ++L
Sbjct: 487 RIILDDAKNNFVENVGDYITDI-CYMACVRKVK-----LEASFINAALAIEIIEGIAQQL 540

Query: 598 DPGYNVMDTLQTLLLKAD 615
            P   V      L++KA+
Sbjct: 541 HPQIVVTKEALPLIVKAE 558


>gi|417403447|gb|JAA48527.1| Hypothetical protein [Desmodus rotundus]
          Length = 626

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/317 (34%), Positives = 167/317 (52%), Gaps = 20/317 (6%)

Query: 317 IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAR 376
           I VAVKV HPG+   +RRD +++ + +++ +++P +KWL L E V++F   M+ Q+DL  
Sbjct: 306 IPVAVKVLHPGLLSEVRRDLLLMKMGSRVLALLPGIKWLSLPEIVEEFEKLMVQQIDLRY 365

Query: 377 EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSAL 436
           EA +L  F  NF     V FP P++P V   VLVETYE+   VS Y  +      LK  +
Sbjct: 366 EARNLEHFQCNFLNVTSVRFPTPLHPFVTRDVLVETYEESVPVSSY-QQAGIPVDLKRKI 424

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQ--KKSSQKRL---------------FR 479
           A +G + LLKM+ VDNF+HAD+HPGNILV+ A    +S + RL                R
Sbjct: 425 ARLGINMLLKMIFVDNFVHADLHPGNILVQGADGLSESQEARLQPVDVCDALVVSMTPAR 484

Query: 480 SKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
               ++ LD G+ AEL   D  N    F AVA   G+  AE  L  ++   C + + F  
Sbjct: 485 CPLRLVLLDAGIVAELQAADLRNFRAVFMAVAMGQGQRVAELILHHARANECRDVERFKA 544

Query: 540 EVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKL 597
           E+      A   T   + +  +  +  + + +  H+V ++ N  +V+   +VLEG  R L
Sbjct: 545 EMATLVTQARKDTITLEKLQVSSLLSSVFKLLMTHKVKLESNFASVVFAIMVLEGLGRSL 604

Query: 598 DPGYNVMDTLQTLLLKA 614
           DP  ++++  +  LLK 
Sbjct: 605 DPKLDILEAARPFLLKG 621



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 61/95 (64%)

Query: 209 GPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYT 268
            P    LWLH++L+  ET+GP +IK GQWA+TR DLF    C + S+LH +   H +A+T
Sbjct: 123 APSISSLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVQVTPHPWAHT 182

Query: 269 KKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           +  +++AFG    ++    ++ PV SG +AQV++A
Sbjct: 183 EHILQQAFGEDWGKVLCFEKQEPVGSGCVAQVYKA 217


>gi|308805478|ref|XP_003080051.1| putative 62.8 kDa protein (ISS) [Ostreococcus tauri]
 gi|116058510|emb|CAL53699.1| putative 62.8 kDa protein (ISS) [Ostreococcus tauri]
          Length = 862

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 144/453 (31%), Positives = 212/453 (46%), Gaps = 65/453 (14%)

Query: 184 LLMRALYLGVLFSPSIMMA-PF----ADSFGPQFRELWLHVVLR-----TLETAGPAFIK 233
           L++RA YL + + P + +A P       S GP      L  V+R     TL TA      
Sbjct: 422 LMLRATYLFITWLPVLTVAIPLLMLSKASPGP------LSAVMRKRAWSTLHTA------ 469

Query: 234 WGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVA 293
               A TR D+  R +C            +S   T + + R  G     IF  F + P+A
Sbjct: 470 ---IALTREDV-SRRICAN----------NSSRQTYRILSRELGCDPRLIFVQFSKTPMA 515

Query: 294 SGSIAQVHRASLRFRYPG---QKVKP----------IVVAVKVRHPGVGESIRRDFVIIN 340
           SGS+AQV++A LR        +  KP          + VAVKVRHP V + I  DF I+ 
Sbjct: 516 SGSVAQVYKARLRREVAAVCSELAKPRRLTLNQDGTMDVAVKVRHPNVAKRIFLDFQILR 575

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
             A  +  + A+K + L  ++ QF+  M SQ DL  EA HL +F +N +R   V  P+PV
Sbjct: 576 AVAGFADSLTALKGMHLKNTLGQFSHTMTSQTDLRNEADHLLKFTHNMKREVQVVAPRPV 635

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
             L   AVLVET+ QG+ +   +          S L  +G H  + MLL DNFIH D+HP
Sbjct: 636 PGLATEAVLVETFMQGDGLGNAIKRKTSR---NSELCSLGVHTYMLMLLRDNFIHQDLHP 692

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVI--------FLDVGMTAELSKTDRVNLVEFFKAVAR 512
           GNIL  V    ++     R KP V          +D G+  EL +T R   + F   + R
Sbjct: 693 GNILYSVHDPSNA-----REKPSVDAQGVTKLELIDFGIADELPQTVRNKFIGFLCFLLR 747

Query: 513 RDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRH 572
            +G  AA+  L    +Q C N  A   ++    +  G      V   E ++++++  R+H
Sbjct: 748 GEGEKAADVALTWDTKQTCTNVVALRRDMAHLVSIKGDIYKRRVDLDELLKEIMQLFRKH 807

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            V++DG   +++V+  VL G+   LDP  N+ +
Sbjct: 808 SVSIDGIYASLVVSLCVLVGFATSLDPEINLFE 840


>gi|294935076|ref|XP_002781309.1| hypothetical protein Pmar_PMAR002788 [Perkinsus marinus ATCC 50983]
 gi|239891796|gb|EER13104.1| hypothetical protein Pmar_PMAR002788 [Perkinsus marinus ATCC 50983]
          Length = 669

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 193/397 (48%), Gaps = 38/397 (9%)

Query: 169 AFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAG 228
           +F+  +L SL   + L  R       F P +  +P       +    W   ++  +E++G
Sbjct: 252 SFLQRLLRSLWRLIQLFFR-------FGPCLATSPILFLGIGKCNNWWWQWLVHCIESSG 304

Query: 229 PAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFE 288
           PAFIK GQWAATR DLF   +   LS+LH++   HS+  T   ++ ++G       +  +
Sbjct: 305 PAFIKLGQWAATRRDLFNDTIISYLSQLHTQVRPHSYRDTLLQLDESYGPEWRTWLE-ID 363

Query: 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSV 348
            + + SG IAQVHR +L   + G       VAVKV HPG  + I  D  I+     ++  
Sbjct: 364 PSVIGSGCIAQVHRGTL--LHNGHH----DVAVKVSHPGCQDIINIDLGILKALGHVAEH 417

Query: 349 IPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWK-DVSFPKPVYPLVHPA 407
           +P ++ L + + V+QF+ F++SQ DL  EAA++ RF  NF+ +   + FP     L    
Sbjct: 418 LPFLRHLGVSDMVEQFSDFLLSQTDLRLEAANIQRFNDNFKDYTGSIRFPTVYSDLTTKT 477

Query: 408 VLVETYEQGECVSRYV---DELQGHERL--------KSALAHIGTHALLKMLLVDNFIHA 456
           VL+E++E G  +   +    ++ G + +        K  +  +G  A L ML +DNFIH 
Sbjct: 478 VLIESFESGVPIGSLLPTNGQVNGDDDVMIDGMMVSKREICKMGVKAFLHMLFIDNFIHG 537

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKP------HVIFLDVGMTAELSKTDRVNLVEFFKAV 510
           D+HPGNILV+V            S         ++FLD G+  ELS  D  N V+   A+
Sbjct: 538 DLHPGNILVQVPSMTDPSDTSADSHAAAAGTVRLVFLDCGLANELSNRDLTNFVDLMHAI 597

Query: 511 ARRDGRTAAECTLRLSKQQNCPN----PKAFIEEVDE 543
               G +     L + + ++ PN    P  FI+ V E
Sbjct: 598 MI--GESTEVGRLMIDRSRSPPNTVYKPDEFIKGVGE 632


>gi|332243385|ref|XP_003270860.1| PREDICTED: uncharacterized aarF domain-containing protein kinase 2
           [Nomascus leucogenys]
          Length = 626

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 173/339 (51%), Gaps = 21/339 (6%)

Query: 295 GSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKW 354
           GS A V +A +    P +    I VAVKV HPG+   +  D +++ + +++  ++P +KW
Sbjct: 285 GSNAGVSQAQVPGHQP-ESGHLIPVAVKVLHPGLLAQVHMDLLLMKIGSRVLGLLPGIKW 343

Query: 355 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE 414
           L L E V++F   M+ Q+DL  EA +L  F  NFR  K V FP P+ P V   VLVETYE
Sbjct: 344 LSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYE 403

Query: 415 QGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ 474
           +   VS Y  +      LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A   SS 
Sbjct: 404 ESVPVSSY-QQAGIPVELKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGANGLSSS 462

Query: 475 KR-----------LFRSKP------HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
           +            L  + P       ++ LD G+ AEL   D  N    F AV    G+ 
Sbjct: 463 QEAQLQQADICDTLVVAVPSSLCPLRLVLLDAGIVAELQAPDLRNFRAVFMAVVMGQGQR 522

Query: 518 AAECTLRLSKQQNCPNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
            AE  L  ++   C + + F  E+      A   T   + +H +  +  + + +  H+V 
Sbjct: 523 VAELILHHARASECRDVEGFKTEMATLVTQARKNTITLEKLHVSSLLSSVFKLLMTHKVK 582

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           ++ N  +++   +VLEG  R LDP  ++++  +  LL  
Sbjct: 583 LESNFASIVFAIMVLEGLGRSLDPKLDILEAARPFLLTG 621



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 57/94 (60%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P    LWLH++L+  ET+GP +IK GQWA+TR DLF    C + S+LH +   H + +T+
Sbjct: 124 PGVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWTHTE 183

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           + + +AFG     I       PV SG +AQV++A
Sbjct: 184 RFLRQAFGEDWGSILSFENREPVGSGCVAQVYKA 217


>gi|71748086|ref|XP_823098.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|70832766|gb|EAN78270.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 529

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 120/385 (31%), Positives = 194/385 (50%), Gaps = 22/385 (5%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R +E AGPAF+K GQW+ TR D+F  +      +L+ +   H +  + + +     +  +
Sbjct: 104 RAVERAGPAFVKAGQWSCTRQDVFSPEFRSVFKKLYDEVDTHPYEVSLQILREELQQDPA 163

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN- 340
           EIF   EE  V SGSI QVH A+L  R+ G+      V VKV HP V E+I +DF IIN 
Sbjct: 164 EIFSTIEEKTVGSGSIGQVHSATL--RHTGEH-----VVVKVMHPNVVETIVKDFCIINT 216

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           LA+ +   +PA++   L      +   + +Q+D   EA +L+ F  NFR    V FPKP+
Sbjct: 217 LASFLHHRVPALEKYDLPALAIAWTTHLAAQLDFRLEARNLTLFRKNFRNEPYVRFPKPL 276

Query: 401 YPLVHPAVLVETYEQGECVS-RYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
             L    VLVET+ +GE  S  ++   + H R K  +A++G +   KMLL D F+H DMH
Sbjct: 277 --LSTQRVLVETFCKGEPASVEFLAAQEEHARDK--IANMGLNTWCKMLLHDKFLHGDMH 332

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGN+++  +            +P V  +D G+  ++S+ + V      +A          
Sbjct: 333 PGNVIIDASDPH---------EPCVWLIDAGLCQQISEDEGVITHNLMEAFVHWKADLCC 383

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +  L + K+Q   +   F  +++  F  W             +Q + E VR ++V++D  
Sbjct: 384 DALLSMGKRQKYADENKFRSDMNWLFNHWRPLHSKDAVVTNILQAIFECVRVNQVHMDPP 443

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVM 604
             +++   LVLE +   L+P +N++
Sbjct: 444 YVSLLFAVLVLESFIMNLNPEFNMV 468


>gi|327272284|ref|XP_003220915.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           2-like [Anolis carolinensis]
          Length = 625

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 169/331 (51%), Gaps = 29/331 (8%)

Query: 309 YPGQKVKP-----IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQ 363
           YP     P     + VA+KV HPG+   ++ D  ++ ++++   ++P VKWL L E V++
Sbjct: 292 YPNAPSSPKRDRLLPVAIKVLHPGLVRQVQMDLFLMKMSSRFVELLPGVKWLSLTEIVEE 351

Query: 364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYV 423
           F   M+ Q+DL  EA +L RF +NFR    V FPKP++P V   +LVET+E+ + +S Y+
Sbjct: 352 FEKLMIQQIDLRYEARNLERFHFNFRDVDYVKFPKPLHPFVTRNILVETFEESKPISHYL 411

Query: 424 DELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKR------- 476
              +     +  LA +G   LLKM+ VDNF+HAD+HPGN+LV+ A+  S           
Sbjct: 412 -HTEATMEFRRKLAKMGMDMLLKMVFVDNFVHADLHPGNVLVQGAELFSDHLEDQTVIVD 470

Query: 477 -----LFRSKP-----HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS 526
                +   +P      ++ LD G+ AEL   D  N    F AV    G   AE  L  +
Sbjct: 471 LLDTLILEVQPSPSPLRLVLLDAGIVAELQVADLENFRAVFTAVVLGQGERVAELILHHA 530

Query: 527 KQQNCPNPKAFIEE----VDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCT 582
           +   C N + F  +    V EA +   T     +  A  +  + + +  H+V ++ N  +
Sbjct: 531 RANQCKNVEKFKADMAQLVKEARS--NTIALGKLQVASLLSSVFKLLMTHQVKLESNFAS 588

Query: 583 VMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           V+   +VLEG  R LDP  +++   + LL+K
Sbjct: 589 VVFAIMVLEGLGRSLDPELDILKAAKPLLIK 619



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 84/140 (60%), Gaps = 9/140 (6%)

Query: 166 DGHAFVTSV--LYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRT 223
           D  AFV  V  ++SLV      +RA  L + F P + + PF     P F  LW+H++L+ 
Sbjct: 89  DNTAFVRRVGLVFSLV------IRACILLLKFGPFLWLYPFT-YISPSFASLWIHLLLKA 141

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
            E++GP FIK GQWA+TR DLF  + C K S+LH K   HS+ YTK+++ R FG    ++
Sbjct: 142 TESSGPTFIKLGQWASTRRDLFSEEFCLKFSKLHIKVVPHSWDYTKRSLTREFGEVWEKV 201

Query: 284 FDGFEEAPVASGSIAQVHRA 303
           F    + PV SG +AQV++A
Sbjct: 202 FTFESQEPVGSGCVAQVYKA 221


>gi|261332971|emb|CBH15966.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 529

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 120/385 (31%), Positives = 194/385 (50%), Gaps = 22/385 (5%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R +E AGPAF+K GQW+ TR D+F  +      +L+ +   H +  + + +     +  +
Sbjct: 104 RAVERAGPAFVKAGQWSCTRQDVFSPEFRSVFKKLYDEVDTHPYEVSLQILREELQQDPA 163

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN- 340
           EIF   EE  V SGSI QVH A+L  R+ G+      V VKV HP V E+I +DF IIN 
Sbjct: 164 EIFSTIEEKTVGSGSIGQVHSATL--RHTGEH-----VVVKVMHPNVVETIVKDFCIINT 216

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           LA+ +   +PA++   L      +   + +Q+D   EA +L+ F  NFR    V FPKP+
Sbjct: 217 LASFLHHRVPALEKYDLPALAIAWTTHLAAQLDFRLEARNLTLFRKNFRNEPYVRFPKPL 276

Query: 401 YPLVHPAVLVETYEQGECVS-RYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
             L    VLVET+ +GE  S  ++   + H R K  +A++G +   KMLL D F+H DMH
Sbjct: 277 --LSTQRVLVETFCKGEPASVEFLAAQEEHARDK--IANMGLNTWCKMLLHDKFLHGDMH 332

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGN+++  +            +P V  +D G+  ++S+ + V      +A          
Sbjct: 333 PGNVIIDASDPH---------EPCVWLIDAGLCQQISEDEGVITHNLMEAFVHWKADLCC 383

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +  L + K+Q   +   F  +++  F  W             +Q + E VR ++V++D  
Sbjct: 384 DALLSMGKRQKYADENKFRSDMNWLFNHWRPLHSKDAVVTNILQAIFECVRVNQVHMDPP 443

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVM 604
             +++   LVLE +   L+P +N++
Sbjct: 444 YVSLLFAVLVLESFIMNLNPEFNMV 468


>gi|410207074|gb|JAA00756.1| aarF domain containing kinase 2 [Pan troglodytes]
          Length = 626

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 172/339 (50%), Gaps = 21/339 (6%)

Query: 295 GSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKW 354
           GS A V  A +    P +    I VAVKV HPG+   +  D +++ + +++  ++P +KW
Sbjct: 285 GSNAGVSWAQVPGHQP-EATNLIPVAVKVLHPGLLAQVHMDLLLMKIGSRVLGLLPGIKW 343

Query: 355 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE 414
           L L E V++F   M+ Q+DL  EA +L  F  NFR  K V FP P+ P V   VLVETYE
Sbjct: 344 LSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYE 403

Query: 415 QGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ 474
           +   VS Y  +      LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A   SS 
Sbjct: 404 ESVPVSSY-QQAGIPMDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGADGLSSS 462

Query: 475 KR-----------LFRSKP------HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
           +            L  + P       ++ LD G+ AEL   D  N    F AV    G+ 
Sbjct: 463 QEAQLQQADICDTLVVAVPSSLCPLRLVLLDAGIVAELQAPDLRNFRAVFMAVVMGQGQR 522

Query: 518 AAECTLRLSKQQNCPNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
            AE  L  ++   C + + F  E+      A   T   + +H +  +  + + +  H+V 
Sbjct: 523 VAELILHHARASECRDVEGFKTEMAMLVTQARKNTITLEKLHVSSLLSSVFKLLMTHKVK 582

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           ++ N  +++   +VLEG  R LDP  ++++  +  LL  
Sbjct: 583 LESNFASIVFAIMVLEGLGRSLDPKLDILEAARPFLLTG 621



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 57/94 (60%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P    LWLH++L+  ET+GP +IK GQWA+TR DLF    C + S+LH +   H + +T+
Sbjct: 124 PSVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWTHTE 183

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           + + +AFG     I       PV SG +AQV++A
Sbjct: 184 RFLRQAFGDDWGSILSFENREPVGSGCVAQVYKA 217


>gi|301756773|ref|XP_002914236.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           2-like [Ailuropoda melanoleuca]
          Length = 626

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/385 (31%), Positives = 189/385 (49%), Gaps = 34/385 (8%)

Query: 252 KLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPG 311
           +L EL    P   + Y     +++F  RL       +  PV S ++     A      P 
Sbjct: 249 RLGELFGH-PGKGWGYQGSLADQSFLERLLLP----KADPVGSNAVLSPSSA------PA 297

Query: 312 QKVKP---IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368
            + +P   I VAVKV HPG+   ++ D +++ + +++ +++P +KWL L E V++F   M
Sbjct: 298 HQPEPDHLIPVAVKVLHPGLLSQVQMDLLLMKMGSRVLALLPGIKWLSLPEIVEEFEKLM 357

Query: 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG 428
           + Q+DL  EA +L  F  NF     V FP P+ P V   VLVETYE+   VS Y  +   
Sbjct: 358 VHQIDLRYEARNLEHFQCNFLNVNSVKFPTPLRPFVTRDVLVETYEESVPVSSY-QQAGI 416

Query: 429 HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQ--KKSSQKRL--------- 477
              LK  +A +G + LLKM+  DNF+HAD+HPGNILV+ A    KS + +L         
Sbjct: 417 PTDLKKKIARLGINMLLKMIFEDNFVHADLHPGNILVQGADGLSKSQEAQLQQMDVCDTL 476

Query: 478 ------FRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNC 531
                  R    ++ LD G+ AEL  TD  N    F AVA   G+  AE  L  ++   C
Sbjct: 477 VVAVTPARCPLRLVLLDAGIVAELQATDLSNFRAVFMAVAMGQGQRVAELILHHARASEC 536

Query: 532 PNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLV 589
            + + F  E+      A   T   + +  +  +  + + +  H+V ++ N  +++   +V
Sbjct: 537 RDVEGFKAEMGTLVTQARKNTITLEKLQVSSLLSNVFKLLMTHKVKLESNFASIVFAIMV 596

Query: 590 LEGWQRKLDPGYNVMDTLQTLLLKA 614
           LEG  R LDP  ++++  +  LLK 
Sbjct: 597 LEGLGRSLDPKLDILEAAKPFLLKG 621



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 68/118 (57%), Gaps = 1/118 (0%)

Query: 186 MRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLF 245
           +RA  L + F P ++  P      P    LWL+++L+  ET+GP +IK GQWA+TR DLF
Sbjct: 101 LRAGALLMKFFPLLLFYPLT-YLAPSVSSLWLYLLLKATETSGPTYIKLGQWASTRRDLF 159

Query: 246 PRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
               C + S+LH +   H + +T+  + +AFG     +    ++ PV SG +AQV++A
Sbjct: 160 SEAFCAQFSKLHVRVTPHPWTHTEHFLRQAFGEDWGRVLCFEKKEPVGSGCVAQVYKA 217


>gi|223995369|ref|XP_002287368.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220976484|gb|EED94811.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 625

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/385 (33%), Positives = 189/385 (49%), Gaps = 27/385 (7%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
            L TL++ GP F+K GQWAATR DLFP  LC +L+ELH  A  H   +T + +  AFG  
Sbjct: 241 TLHTLQSLGPTFVKLGQWAATRRDLFPVHLCNRLAELHDMARTHDAQHTTEALAEAFGED 300

Query: 280 L-SEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVI 338
             S       ++ + SGS AQVH+  L      ++    VVA+KV HP     + RD  +
Sbjct: 301 YESRGLRIMNDSILGSGSAAQVHKGMLAIGNGTER----VVAIKVLHPHTRFLVERDLAL 356

Query: 339 INLAAK-ISSVIP--AVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKD-- 393
           +   A  I   +P   V+ + L  +V  F   M+ QVDL  E  +L  F  NF       
Sbjct: 357 MQHVADFIDKCVPLEVVRMMSLPRAVSNFQDIMIRQVDLRIEGCNLQTFRDNFDCSSKSP 416

Query: 394 --VSFPKPVYPLVHPAVLVETYEQGEC--VSRYV-DELQGHERLKSALAHIGTHALLKML 448
             + FP P    +   VLVE Y   +   +SRY+ DE      ++  LA     A LKM+
Sbjct: 417 LVIDFPLPEKGWISERVLVEEYAGDDAIPISRYLADESPRGLEIRKKLAGPLLRAFLKMV 476

Query: 449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFK 508
            +DNF+H+D+HPGN+LVR    K    +   +   +IFLD G+   L   D+ NL + FK
Sbjct: 477 FIDNFVHSDLHPGNVLVREIPNKYDPGKTHYT---IIFLDAGIANSLRPNDQRNLHDLFK 533

Query: 509 AVARRDGRTAAECTLRLSKQQNCPN----PKAFIEEVDEAFAFWG--TPEG---DLVHPA 559
           AV   DG TA +  +  ++ + C +      AF   V E  + +   T +G     V   
Sbjct: 534 AVVLNDGYTAGQLMVERARFERCSSIPGGTHAFATGVSELVSEFHDRTKQGLTLGAVRVG 593

Query: 560 ECMQQLLEKVRRHRVNVDGNVCTVM 584
             + ++L+  RR+ V +D  + +V+
Sbjct: 594 SLLARVLDLCRRYGVEIDPAMASVV 618


>gi|281340118|gb|EFB15702.1| hypothetical protein PANDA_002103 [Ailuropoda melanoleuca]
          Length = 623

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/385 (31%), Positives = 189/385 (49%), Gaps = 34/385 (8%)

Query: 252 KLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPG 311
           +L EL    P   + Y     +++F  RL       +  PV S ++     A      P 
Sbjct: 249 RLGELFGH-PGKGWGYQGSLADQSFLERLLLP----KADPVGSNAVLSPSSA------PA 297

Query: 312 QKVKP---IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFM 368
            + +P   I VAVKV HPG+   ++ D +++ + +++ +++P +KWL L E V++F   M
Sbjct: 298 HQPEPDHLIPVAVKVLHPGLLSQVQMDLLLMKMGSRVLALLPGIKWLSLPEIVEEFEKLM 357

Query: 369 MSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQG 428
           + Q+DL  EA +L  F  NF     V FP P+ P V   VLVETYE+   VS Y  +   
Sbjct: 358 VHQIDLRYEARNLEHFQCNFLNVNSVKFPTPLRPFVTRDVLVETYEESVPVSSY-QQAGI 416

Query: 429 HERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQ--KKSSQKRL--------- 477
              LK  +A +G + LLKM+  DNF+HAD+HPGNILV+ A    KS + +L         
Sbjct: 417 PTDLKKKIARLGINMLLKMIFEDNFVHADLHPGNILVQGADGLSKSQEAQLQQMDVCDTL 476

Query: 478 ------FRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNC 531
                  R    ++ LD G+ AEL  TD  N    F AVA   G+  AE  L  ++   C
Sbjct: 477 VVAVTPARCPLRLVLLDAGIVAELQATDLSNFRAVFMAVAMGQGQRVAELILHHARASEC 536

Query: 532 PNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLV 589
            + + F  E+      A   T   + +  +  +  + + +  H+V ++ N  +++   +V
Sbjct: 537 RDVEGFKAEMGTLVTQARKNTITLEKLQVSSLLSNVFKLLMTHKVKLESNFASIVFAIMV 596

Query: 590 LEGWQRKLDPGYNVMDTLQTLLLKA 614
           LEG  R LDP  ++++  +  LLK 
Sbjct: 597 LEGLGRSLDPKLDILEAAKPFLLKG 621



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 68/118 (57%), Gaps = 1/118 (0%)

Query: 186 MRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLF 245
           +RA  L + F P ++  P      P    LWL+++L+  ET+GP +IK GQWA+TR DLF
Sbjct: 101 LRAGALLMKFFPLLLFYPLT-YLAPSVSSLWLYLLLKATETSGPTYIKLGQWASTRRDLF 159

Query: 246 PRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
               C + S+LH +   H + +T+  + +AFG     +    ++ PV SG +AQV++A
Sbjct: 160 SEAFCAQFSKLHVRVTPHPWTHTEHFLRQAFGEDWGRVLCFEKKEPVGSGCVAQVYKA 217


>gi|410301722|gb|JAA29461.1| aarF domain containing kinase 2 [Pan troglodytes]
          Length = 626

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 172/339 (50%), Gaps = 21/339 (6%)

Query: 295 GSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKW 354
           GS A V  A +    P +    I VAVKV HPG+   +  D +++ + +++  ++P +KW
Sbjct: 285 GSNAGVSWAQVPGHQP-EATNLIPVAVKVLHPGLLAQVHMDLLLMKIGSRVLGLLPGIKW 343

Query: 355 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE 414
           L L E V++F   M+ Q+DL  EA +L  F  NFR  K V FP P+ P V   VLVETYE
Sbjct: 344 LSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYE 403

Query: 415 QGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ 474
           +   VS Y  +      LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A   SS 
Sbjct: 404 ESVPVSSY-QQAGIPMDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGADGLSSS 462

Query: 475 KR-----------LFRSKP------HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
           +            L  + P       ++ LD G+ AEL   D  N    F AV    G+ 
Sbjct: 463 QEAQLQQADICDTLVVAVPSSLCPLRLVLLDAGIVAELQAPDLRNFRAVFMAVVMGQGQR 522

Query: 518 AAECTLRLSKQQNCPNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
            AE  L  ++   C + + F  E+      A   T   + +H +  +  + + +  H+V 
Sbjct: 523 VAELILHHARASECRDVEGFKTEMAMLVTQARKNTITLEKLHVSSLLSSVFKLLMTHKVK 582

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           ++ N  +++   +VLEG  R LDP  ++++  +  LL  
Sbjct: 583 LESNFASIVFAIMVLEGLGRSLDPKLDILEAARPFLLTG 621



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 57/94 (60%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P    LWLH++L+  ET+GP +IK GQWA+TR DLF    C + S+LH +   H + +T+
Sbjct: 124 PSVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWTHTE 183

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           + + +AFG     I       PV SG +AQV++A
Sbjct: 184 RFLRQAFGDDWGSILSFENREPVGSGCVAQVYKA 217


>gi|332869471|ref|XP_001154570.2| PREDICTED: uncharacterized aarF domain-containing protein kinase 2
           isoform 2 [Pan troglodytes]
 gi|410252080|gb|JAA14007.1| aarF domain containing kinase 2 [Pan troglodytes]
          Length = 626

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 172/339 (50%), Gaps = 21/339 (6%)

Query: 295 GSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKW 354
           GS A V  A +    P +    I VAVKV HPG+   +  D +++ + +++  ++P +KW
Sbjct: 285 GSNAGVSWAQVPGHQP-EATNLIPVAVKVLHPGLLAQVHMDLLLMKIGSRVLGLLPGIKW 343

Query: 355 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE 414
           L L E V++F   M+ Q+DL  EA +L  F  NFR  K V FP P+ P V   VLVETYE
Sbjct: 344 LSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYE 403

Query: 415 QGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ 474
           +   VS Y  +      LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A   SS 
Sbjct: 404 ESVPVSSY-QQAGIPMDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGADGLSSS 462

Query: 475 KR-----------LFRSKP------HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
           +            L  + P       ++ LD G+ AEL   D  N    F AV    G+ 
Sbjct: 463 QEAQLQQADICDTLVVAVPSSLCPLRLVLLDAGIVAELQAPDLRNFRAVFMAVVMGQGQR 522

Query: 518 AAECTLRLSKQQNCPNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
            AE  L  ++   C + + F  E+      A   T   + +H +  +  + + +  H+V 
Sbjct: 523 VAELILHHARASECRDVEGFKTEMAMLVTQARKNTITLEKLHVSSLLSSVFKLLMTHKVK 582

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           ++ N  +++   +VLEG  R LDP  ++++  +  LL  
Sbjct: 583 LESNFASIVFAIMVLEGLGRSLDPKLDILEAARPFLLTG 621



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 57/94 (60%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P    LWLH++L+  ET+GP +IK GQWA+TR DLF    C + S+LH +   H + +T+
Sbjct: 124 PSVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWTHTE 183

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           + + +AFG     I       PV SG +AQV++A
Sbjct: 184 RFLRQAFGDDWGSILSFENREPVGSGCVAQVYKA 217


>gi|403276234|ref|XP_003929811.1| PREDICTED: uncharacterized aarF domain-containing protein kinase 2
           [Saimiri boliviensis boliviensis]
          Length = 626

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/327 (33%), Positives = 168/327 (51%), Gaps = 23/327 (7%)

Query: 310 PGQKVKP---IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV 366
           PG   +P   I VAVKV HPG+   +  D +++   +++ +++P +KWL L E V++F  
Sbjct: 296 PGYHPEPGHLIPVAVKVLHPGLLSQVHMDLLLMKTGSRVLALLPGIKWLSLPEIVEEFEK 355

Query: 367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDEL 426
            M+ Q+DL  EA +L  F  NFR  K V FP P+ P V   VLVETYE+   VS Y  + 
Sbjct: 356 LMVQQIDLRYEAENLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEESVPVSSY-QQA 414

Query: 427 QGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVA-----------QKKSSQK 475
                LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A           Q+     
Sbjct: 415 GIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGADGLFLSQEAQLQQADVCD 474

Query: 476 RLFRSKP------HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQ 529
            L  + P       ++ LD G+ AEL   D  N    F AV    G+  AE  L  ++  
Sbjct: 475 SLVVAMPSALCPLRLVLLDAGIVAELQAPDLRNFRAVFMAVVMGQGQRVAELILHHARAS 534

Query: 530 NCPNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTT 587
            C + + F  E+ +    A   T   + +H +  +  + + +  H+V ++ N  +++   
Sbjct: 535 ECRDVEGFKTEMAKLVTQARKNTITLEKLHVSSLLSSVFKLLMTHKVKLESNFASIVFAI 594

Query: 588 LVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           +VLEG  R LDP  ++++  +  LL  
Sbjct: 595 MVLEGLGRSLDPKLDILEAARPFLLTG 621



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/120 (39%), Positives = 69/120 (57%), Gaps = 1/120 (0%)

Query: 184 LLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPD 243
           L +RA  L V F P +++ P      P    LWLH++L+  ET+GP +IK GQWA+TR D
Sbjct: 99  LWLRAGALLVKFFPLLILYPLT-YLAPSVSTLWLHLLLKATETSGPTYIKLGQWASTRRD 157

Query: 244 LFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           LF    C + S+LH +   H + +T++ +  AFG    +I       PV SG +AQV++A
Sbjct: 158 LFSEAFCAQFSKLHVRVTPHPWTHTERFLREAFGEEWGDILSFENREPVGSGCVAQVYKA 217


>gi|363728102|ref|XP_416350.3| PREDICTED: uncharacterized aarF domain-containing protein kinase 2
           [Gallus gallus]
          Length = 626

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 163/314 (51%), Gaps = 20/314 (6%)

Query: 319 VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREA 378
           VAVKV HPG+   ++ D  ++ L + I  ++P  KWL L E V++F   M+ Q+DL  EA
Sbjct: 307 VAVKVLHPGLVHQVQMDLFLMKLGSHIIGLLPGFKWLSLTEIVEEFEKLMLQQIDLHYEA 366

Query: 379 AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAH 438
            +L RF  NF     V FP PV+PLV   VLVET+E+ E +SRY+      E L+  LA 
Sbjct: 367 RNLERFRQNFLDVDFVKFPTPVHPLVTTDVLVETFEESEPISRYLHTEVATE-LRQRLAK 425

Query: 439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKR------------LFRSKPH--- 483
           +G   LLKM+ VDNF+HAD+HPGNILV+     S+  +            +   +P    
Sbjct: 426 MGMDMLLKMVFVDNFVHADLHPGNILVQGTACISTSCKEQTAIVDLCDTLVVEVQPPFRQ 485

Query: 484 --VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEV 541
             ++ LD G+ AEL   D  N    F AV +  G   AE  L  ++   C + + F  E+
Sbjct: 486 LCLVLLDAGIVAELQSADMQNFRAVFTAVVQGQGEKVAELILHHARANQCQDIERFKAEM 545

Query: 542 DEAFAFW--GTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDP 599
            E        T     +  A  +  + + +  H+V ++ N  +++   +VLEG  R LDP
Sbjct: 546 AELVTKVRRNTIALGKLQVANLLSSVFKLLMTHKVKLESNFASIIFAIMVLEGLGRSLDP 605

Query: 600 GYNVMDTLQTLLLK 613
             ++++  + LL++
Sbjct: 606 ELDILEAAKPLLIR 619



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 54/94 (57%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P    +WL ++ R  E AGP  IK GQWA+TR DLF    C + S+LH +   H++ +T 
Sbjct: 119 PGLAAVWLRLLRRAAEAAGPTCIKLGQWASTRRDLFSEAFCDEFSKLHVEVSPHAWGHTD 178

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           + + +AFG     I     + P+ SG +AQV++A
Sbjct: 179 ELLRKAFGEDWRSILTFPSQEPIGSGCVAQVYKA 212


>gi|326912241|ref|XP_003202462.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           2-like [Meleagris gallopavo]
          Length = 522

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 161/314 (51%), Gaps = 20/314 (6%)

Query: 319 VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREA 378
           VAVKV HPG+   ++ D  ++ L + I  ++P  KWL L E V++F   M+ Q+DL  EA
Sbjct: 203 VAVKVLHPGLVHQVQMDLFLMKLGSHIIGLLPGFKWLSLTEIVEEFEKLMLQQIDLHYEA 262

Query: 379 AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAH 438
            +L RF  NF     V FP PV PLV   VLVET+E+ E +S Y+      E L+  LA 
Sbjct: 263 RNLERFCQNFLDVDFVKFPTPVRPLVTTDVLVETFEESEPISHYLHTEVATE-LRQRLAK 321

Query: 439 IGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKR------------LFRSKPH--- 483
           +G   LLKM+ VDNF+HAD+HPGNILV+     SS  +            +   +P    
Sbjct: 322 MGMDMLLKMVFVDNFVHADLHPGNILVQGTACVSSSCKEQTAIVDVCDTLVLEVQPPFRR 381

Query: 484 --VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEV 541
             ++ LD G+ AEL   D  N    F AV +  G   AE  L  ++   C + + F  E+
Sbjct: 382 LCLVLLDAGIVAELQSADMQNFRAVFTAVVQGQGEKVAELILHHARANQCQDIERFKAEM 441

Query: 542 DEAFAFW--GTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDP 599
            E        T     +  A  +  + + +  H+V ++ N  +++   +VLEG  R LDP
Sbjct: 442 AELVTKVRRNTIALGKLQVANLLSSVFKLLMTHKVKLESNFASIIFAIMVLEGLGRSLDP 501

Query: 600 GYNVMDTLQTLLLK 613
             ++++  + LL++
Sbjct: 502 ELDILEAAKPLLIR 515


>gi|294935074|ref|XP_002781308.1| hypothetical protein Pmar_PMAR002787 [Perkinsus marinus ATCC 50983]
 gi|239891795|gb|EER13103.1| hypothetical protein Pmar_PMAR002787 [Perkinsus marinus ATCC 50983]
          Length = 1278

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 193/397 (48%), Gaps = 38/397 (9%)

Query: 169 AFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAG 228
           +F+  +L SL   + L  R       F P +  +P       +    W   ++  +E++G
Sbjct: 252 SFLQRLLRSLWRLIQLFFR-------FGPCLATSPILFLGIGKCNNWWWQWLVHCIESSG 304

Query: 229 PAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFE 288
           PAFIK GQWAATR DLF   +   LS+LH++   HS+  T   ++ ++G       +  +
Sbjct: 305 PAFIKLGQWAATRRDLFNDTIISYLSQLHTQVRPHSYRDTLLQLDESYGPEWRTWLE-ID 363

Query: 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSV 348
            + + SG IAQVHR +L   + G       VAVKV HPG  + I  D  I+     ++  
Sbjct: 364 PSVIGSGCIAQVHRGTL--LHNGHH----DVAVKVSHPGCQDIINIDLGILKALGHVAEH 417

Query: 349 IPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWK-DVSFPKPVYPLVHPA 407
           +P ++ L + + V+QF+ F++SQ DL  EAA++ RF  NF+ +   + FP     L    
Sbjct: 418 LPFLRHLGVSDMVEQFSDFLLSQTDLRLEAANIQRFNDNFKDYTGSIRFPTVYSDLTTKT 477

Query: 408 VLVETYEQGECVSRYV---DELQGHERL--------KSALAHIGTHALLKMLLVDNFIHA 456
           VL+E++E G  +   +    ++ G + +        K  +  +G  A L ML +DNFIH 
Sbjct: 478 VLIESFESGVPIGSLLPTNGQVNGDDDVMIDGMMVSKREICKMGVKAFLHMLFIDNFIHG 537

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKP------HVIFLDVGMTAELSKTDRVNLVEFFKAV 510
           D+HPGNILV+V            S         ++FLD G+  ELS  D  N V+   A+
Sbjct: 538 DLHPGNILVQVPSMTDPSDTSADSHAAAAGTVRLVFLDCGLANELSNRDLTNFVDLMHAI 597

Query: 511 ARRDGRTAAECTLRLSKQQNCPN----PKAFIEEVDE 543
               G +     L + + ++ PN    P  FI+ V E
Sbjct: 598 MI--GESTEVGRLMIDRSRSPPNTVYKPDEFIKGVGE 632


>gi|397484553|ref|XP_003813438.1| PREDICTED: uncharacterized aarF domain-containing protein kinase 2
           [Pan paniscus]
          Length = 626

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 172/339 (50%), Gaps = 21/339 (6%)

Query: 295 GSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKW 354
           GS A V  A +    P +    I VAVKV HPG+   +  D +++ + +++  ++P +KW
Sbjct: 285 GSNAGVSWAQVPGHQP-EATNLIPVAVKVLHPGLLAQVHMDLLLMKIGSRVLGLLPGIKW 343

Query: 355 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE 414
           L L E V++F   M+ Q+DL  EA +L  F  NFR  K V FP P+ P V   VLVETYE
Sbjct: 344 LSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYE 403

Query: 415 QGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ 474
           +   VS Y  +      LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A   SS 
Sbjct: 404 ESVPVSSY-QQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGADGLSSS 462

Query: 475 KR-----------LFRSKP------HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
           +            L  + P       ++ LD G+ AEL   D  N    F AV    G+ 
Sbjct: 463 QEAQLQQADICDTLVVAVPSSLCPLRLVLLDAGIVAELQAPDLRNFRAVFMAVVMGQGQR 522

Query: 518 AAECTLRLSKQQNCPNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
            AE  L  ++   C + + F  E+      A   T   + +H +  +  + + +  H+V 
Sbjct: 523 VAELILHHARASECRDVEGFKTEMAMLVTQARKNTITLEKLHVSSLLSSVFKLLMTHKVK 582

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           ++ N  +++   +VLEG  R LDP  ++++  +  LL  
Sbjct: 583 LESNFASIVFAIMVLEGLGRSLDPKLDILEAARPFLLTG 621



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 57/94 (60%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P    LWLH++L+  ET+GP +IK GQWA+TR DLF    C + S+LH +   H + +T+
Sbjct: 124 PSVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWTHTE 183

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           + + +AFG     I       PV SG +AQV++A
Sbjct: 184 RFLRQAFGDDWGSILSFENREPVGSGCVAQVYKA 217


>gi|389581345|ref|ZP_10171372.1| putative unusual protein kinase [Desulfobacter postgatei 2ac9]
 gi|389402980|gb|EIM65202.1| putative unusual protein kinase [Desulfobacter postgatei 2ac9]
          Length = 559

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 192/387 (49%), Gaps = 29/387 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP FIK GQ  ++RPDL P DL ++L++L  K P  SF    + I   FGR +SE
Sbjct: 66  VLEELGPTFIKMGQVLSSRPDLIPLDLTRELAKLQDKVPSFSFEQVGQIILSEFGRPISE 125

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
           +F  FEEAP AS SI QVHRA L  +          VAVK++ PG+ ++I  D  II+ L
Sbjct: 126 VFYSFEEAPFASASIGQVHRAELSSKEQ--------VAVKIQRPGIRKTIEVDLEIIHYL 177

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +   +  +   R  + V++FA  +  ++D   EAA++ +    F R  D+  P+  +
Sbjct: 178 AQVMEKNLEDMAIFRPVKIVEEFAQSLEKELDYMVEAANMEQMADQFAREPDIRIPEVYW 237

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERL---KSALAHIGTHALLKMLLVDNFIHADM 458
                 VL   Y  G       D+++  +R    +  +  IG   +++ +    F HAD 
Sbjct: 238 SHSTQRVLCMEYILG----IKADDVEAIDRAALDRKKITRIGADFVMRQIFEFGFFHADP 293

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI +   Q+             +  +D GMT  +  T R   ++  +A+A ++ R  
Sbjct: 294 HPGNIFILEDQR-------------ICMIDFGMTGFVDSTTRELFIDLLQALASKNTRNT 340

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
           A    RL++     N  A  +++ +  A + + + + ++P+  + Q LE   RH + +  
Sbjct: 341 ARLLCRLTEPDPSVNMAALEKDIAQFCAVYLSRKLEEINPSRMIHQFLELCTRHGLRIPP 400

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMD 605
           ++  +M   + +EG  R LDP +++++
Sbjct: 401 DLFLMMKAFISIEGVARTLDPQFDLLN 427


>gi|294866121|ref|XP_002764614.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239864191|gb|EEQ97331.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 475

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/393 (31%), Positives = 190/393 (48%), Gaps = 38/393 (9%)

Query: 169 AFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAG 228
           +F+  +L SL   + L  R       F P +  +P       +    W   ++  +E +G
Sbjct: 98  SFLQRLLRSLWRLIQLFFR-------FGPCLATSPILFLGIGKCNNWWWQWLVHCIERSG 150

Query: 229 PAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFE 288
           PAFIK GQWAATR DLF   +   LS+LH++   HS+  T   ++ ++G       +  +
Sbjct: 151 PAFIKLGQWAATRRDLFNDTIISYLSQLHTQVRPHSYRDTLLQLDESYGPEWRTWLE-ID 209

Query: 289 EAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSV 348
            + + SG IAQVHR +L   + G       VAVKV HPG  + I  D  I+     ++  
Sbjct: 210 PSVIGSGCIAQVHRGTL--LHNGHH----DVAVKVSHPGCQDIINIDLGILKALGHVADH 263

Query: 349 IPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWK-DVSFPKPVYPLVHPA 407
           +P ++ L + + V+QF+ F++SQ DL  EAA++ RF  NF+ +   + FP     L    
Sbjct: 264 LPFLRHLGVSDMVEQFSDFLLSQTDLRLEAANIQRFNDNFKDYTGSIRFPTVYSDLTTKT 323

Query: 408 VLVETYEQGECVSRYV--------DELQGHERL---KSALAHIGTHALLKMLLVDNFIHA 456
           VL+E++E G  +   +        D+    +R+   K  +  +G  A L ML +DNFIH 
Sbjct: 324 VLIESFESGVPIGSLLSTNGQVVNDDDVIIDRMRVSKREICKMGVKAFLHMLFIDNFIHG 383

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKP------HVIFLDVGMTAELSKTDRVNLVEFFKAV 510
           D+HPGNILV+V            S         ++FLD G+  ELS  D  N V+   A+
Sbjct: 384 DLHPGNILVQVPTMTDPSDTSANSHAAAAGTVRLVFLDCGLANELSNRDLTNFVDLMHAI 443

Query: 511 ARRDGRTAAECTLRLSKQQNCPN----PKAFIE 539
               G +     L + + ++ PN    P  FI+
Sbjct: 444 MI--GESTEVGRLMIDRSRSPPNTVYKPDEFIK 474


>gi|355748059|gb|EHH52556.1| hypothetical protein EGM_13014, partial [Macaca fascicularis]
          Length = 558

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/340 (34%), Positives = 173/340 (50%), Gaps = 41/340 (12%)

Query: 295 GSIAQVHRASLRFRYPGQKVKP---IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPA 351
           GS A V +A    + PG +++P   I VAVKV HPG+   +  D +++ + +++  ++P 
Sbjct: 235 GSNAGVSQA----QVPGHQLEPGHLIPVAVKVLHPGLLAQVHMDLLLMKIGSRVLGLLPG 290

Query: 352 VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVE 411
           +KWL L E V++F   M+ Q+DL  EA +L  F  NF+  K V FP P+ P V   VLVE
Sbjct: 291 IKWLSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFQNVKAVKFPTPLRPFVTREVLVE 350

Query: 412 TYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKK 471
           TYE+   VS Y  +      LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A   
Sbjct: 351 TYEESVPVSSY-QQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGADSL 409

Query: 472 SSQKR-----------LFRSKP------HVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           SS +            L  + P       ++ LD G+ AEL  +D  N    F AV    
Sbjct: 410 SSSREAQLQQADVCDTLVVAVPSSLCPLRLVLLDAGIVAELQASDLRNFRAVFMAVVMGQ 469

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRV 574
           G+  AE  L  ++   C + + F  E+             LV  A      LEKV+    
Sbjct: 470 GQRVAELILHHARASECRDVEGFKTEM-----------ATLVTQARKNTITLEKVK---- 514

Query: 575 NVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
            ++ N  +++   +VLEG  R LDP  ++++  +  LL  
Sbjct: 515 -LESNFASIVFAIMVLEGLGRSLDPKLDILEAARPFLLTG 553



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 58/94 (61%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P    LWLH++L+  ET+GP +IK GQWA+TR DLF    C + S+LH +   H +A+T+
Sbjct: 74  PSVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWAHTE 133

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           + + +AFG     I       PV SG +AQV++A
Sbjct: 134 RFLRQAFGEDWGSILSFENREPVGSGCVAQVYKA 167


>gi|311275266|ref|XP_003134655.1| PREDICTED: uncharacterized aarF domain-containing protein kinase 2
           [Sus scrofa]
          Length = 626

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/434 (30%), Positives = 205/434 (47%), Gaps = 33/434 (7%)

Query: 212 FRELWLHVV-LRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKK 270
           F E W  V+    LE  G   +     A   P     D  ++L+   S  P        +
Sbjct: 191 FGEDWGRVLCFEKLEPVGSGCVAQVYKARANPAFLENDSIQRLASASSLQPSSEAGVVGR 250

Query: 271 TIE------RAFGRRLSEIFDGFEEA---PVAS--GSIAQVHRASLRFRYPGQKVKPIVV 319
             E      +A+G   S     F E    P A   GS A + +AS   R P +    I V
Sbjct: 251 LRECLGPQGKAWGPPGSLADHSFLEKLLLPKADLVGSSAVLFQASGPVRKP-EPDHLIPV 309

Query: 320 AVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAA 379
           AVKV HPG+   ++ D +++ + +++ +++P +KWL L E V++F   M+ Q+DL  EA 
Sbjct: 310 AVKVLHPGLLAQVQMDLLLMKMGSRVLALLPGIKWLSLPEIVEEFEKLMVQQIDLRYEAR 369

Query: 380 HLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHI 439
           +L  F  NF     V FP P+ P V   VLVETYE+   VS Y  +      +K  +A +
Sbjct: 370 NLEHFQCNFLHVNSVKFPTPLRPFVTRDVLVETYEESVPVSSY-QQAGIPVDVKRKIARL 428

Query: 440 GTHALLKMLLVDNFIHADMHPGNILVRVAQ--KKSSQKRL---------------FRSKP 482
           G + LLKM+ VDNF+HAD+HPGNILV+ A    KS + RL                +   
Sbjct: 429 GINMLLKMIFVDNFVHADLHPGNILVQGADGLSKSQEARLQQVDVCDALAVAVTPAQCPL 488

Query: 483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVD 542
            ++ LD G+ AEL  TD  N    F AVA   G+  AE  L  ++   C + + F  E+ 
Sbjct: 489 RLVLLDAGIVAELQATDLRNFRAVFMAVAMGQGQRVAELILHHARAHECKDVEGFKAEMA 548

Query: 543 EAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPG 600
                A   T   + +  +  +  + + +  H+V ++ N  +++   +VLEG  R LDP 
Sbjct: 549 RLVTQARKNTITLEKLQVSSLLSNVFKLLVTHKVKLESNFASIVFAIMVLEGLGRSLDPK 608

Query: 601 YNVMDTLQTLLLKA 614
            ++++  +  LL+ 
Sbjct: 609 LDILEAAKPFLLQG 622



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 70/118 (59%), Gaps = 1/118 (0%)

Query: 186 MRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLF 245
           +RA  L V F P +++ PF     P    LWL+++L+  ET+GP +IK GQWA+TR DLF
Sbjct: 102 LRAGALLVKFFPLLLLYPFT-YLAPSVSSLWLYLLLKATETSGPTYIKLGQWASTRRDLF 160

Query: 246 PRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
               C + S+LH + P H + +T+  + +AFG     +    +  PV SG +AQV++A
Sbjct: 161 SEAFCAQFSKLHVRVPPHPWTHTEHFLRQAFGEDWGRVLCFEKLEPVGSGCVAQVYKA 218


>gi|224013586|ref|XP_002296457.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220968809|gb|EED87153.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 677

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 211/461 (45%), Gaps = 78/461 (16%)

Query: 221 LRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRL 280
           L  +ETAGP +IK  QWA+TR DLF  +     S+L  +   H++  T+  + RAFG+  
Sbjct: 222 LWAIETAGPTYIKLVQWASTRNDLFSPEFVGHFSKLQDETRGHNWKDTEVALVRAFGKDW 281

Query: 281 SEI--FD--------------------------------------------GFEEAPVAS 294
             +  FD                                            G    P+ S
Sbjct: 282 KNVLSFDRIIEDDESDVEGGENRRLKGKGGLANRERQKRLEKSESASSSSAGMPTIPIGS 341

Query: 295 GSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIP--AV 352
           G +AQV++A LR  Y G       VAVKV+HP + E +  DF ++N  A     IP   +
Sbjct: 342 GCVAQVYKARLRSSY-GLHPAGTSVAVKVQHPHILEKVCLDFYLMNKFAAFLEFIPYLNL 400

Query: 353 KWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVET 412
            +L + +SV QF   M+ Q+DL  EA +L RF  +F     ++FP+P+  L    VLVE 
Sbjct: 401 DYLSMKDSVDQFRDIMLPQLDLRVEAHNLQRFRRDFEGESQIAFPEPLMDLTSREVLVER 460

Query: 413 YEQGECVSRYVDELQGH--ERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQK 470
           + +GE +  +V +   H  ++ +  LA IG  A++KM+ + +FIHAD+HPGN++V   Q 
Sbjct: 461 FVEGEPMLNFVLKEDAHHSKKDREELARIGLEAVMKMIFLHDFIHADLHPGNMIVDRNQS 520

Query: 471 KSSQKRLFRSKP-HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQ 529
                   R KP  V  +D G+T EL + D +NLV+   ++ +RDG  A +  +  +K+ 
Sbjct: 521 A-------RGKPLRVNMIDCGLTVELGEQDHMNLVKILGSLIKRDGYGAGKLMVDTAKK- 572

Query: 530 NCPNPKAFIE----------EVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
            C + +  +E          E DE   F       L    + +  +     +H+V ++  
Sbjct: 573 -CQSTELDVEMFCNGIQKICEDDEENNF-------LESVGDYITDICYLACKHKVKLEAA 624

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSL 620
                +   ++EG    L P  +V      ++LKA+    L
Sbjct: 625 FINAALACEIMEGLAASLYPDMHVQQVALPMVLKAEMMHGL 665


>gi|395837382|ref|XP_003791615.1| PREDICTED: uncharacterized aarF domain-containing protein kinase 2
           [Otolemur garnettii]
          Length = 626

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 178/344 (51%), Gaps = 29/344 (8%)

Query: 294 SGSIAQVHRASLRFRYPGQKVKP---IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIP 350
           +GS A++ +A +    PG   K    I VAVKV HPG+   +  D +++ + +++  ++P
Sbjct: 284 AGSNAELSQALV----PGHCPKTDHLIPVAVKVLHPGLLSQVHMDLLLMKIGSRVLGLLP 339

Query: 351 AVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLV 410
            +KWL L E V++F   M+ Q+DL  EA +L  F  NF+  K V FP P+ P V   VLV
Sbjct: 340 GIKWLSLPEIVEEFEKLMVQQIDLRYEARNLEHFQRNFQNVKAVKFPTPLRPFVTRDVLV 399

Query: 411 ETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQK 470
           ETYE+   VS Y  +      LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A  
Sbjct: 400 ETYEESVPVSSY-QQAGIPVDLKKKIARLGINMLLKMIFVDNFVHADLHPGNILVQGADS 458

Query: 471 KSSQKRLFRSKP------------------HVIFLDVGMTAELSKTDRVNLVEFFKAVAR 512
            S+ + + + +P                   ++ LD G+ AEL   D  N    F AV  
Sbjct: 459 LSASRDV-QLQPVDVCDTLVVALAPALHPLRLVLLDAGIVAELQAADLRNFRAVFVAVVM 517

Query: 513 RDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVR 570
             G+  AE  L  ++   C + + F  E+      A   T   + +H +  +  + + + 
Sbjct: 518 GQGQRVAELILHHARANECRDVEGFKAEMATLVTQARKNTITLEKLHVSSLLSSVFKLLM 577

Query: 571 RHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
            H+V ++ N  +++   +VLEG  R LDP  ++++  +  LLK 
Sbjct: 578 AHKVKLESNFASIVFAIMVLEGLGRSLDPSLDILEAAKPFLLKG 621



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 58/95 (61%)

Query: 209 GPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYT 268
            P    LWL ++L+  ET+GP +IK GQWA+TR DLF    C + S+LH +   H++ +T
Sbjct: 123 APSVSTLWLRLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHAWTHT 182

Query: 269 KKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           +  +++AFG     I     + PV SG +AQV++A
Sbjct: 183 EHFLQQAFGEDWGSILSFENQEPVGSGCVAQVYKA 217


>gi|410952987|ref|XP_003983158.1| PREDICTED: uncharacterized aarF domain-containing protein kinase 2
           [Felis catus]
          Length = 626

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/327 (33%), Positives = 168/327 (51%), Gaps = 23/327 (7%)

Query: 310 PGQKVKP---IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV 366
           P  + +P   I VAVKV HPG+   ++ D +++   +++ +++P VKWL L E V++F  
Sbjct: 296 PAHQSEPDHLIPVAVKVLHPGLLSQVQMDLLLMKTGSRVLALLPGVKWLSLPEIVEEFEK 355

Query: 367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDEL 426
            M+ Q+DL  EA +L  F  NF     V FP P+ P V   VLVETYE+   VS Y  + 
Sbjct: 356 LMVHQIDLRYEARNLEHFQCNFLNVNSVKFPTPLRPFVTRDVLVETYEESVPVSSY-QQA 414

Query: 427 QGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQ--KKSSQKRL------- 477
                LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A    KS + RL       
Sbjct: 415 GIPVDLKKKIARLGINMLLKMIFVDNFVHADLHPGNILVQGADGLSKSQEARLQQVDVCD 474

Query: 478 -----FRSKP---HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQ 529
                    P    ++ LD G+ AEL   D  N    F AVA   G+  AE  L  ++  
Sbjct: 475 TLVMAMTPAPCPLRLVLLDAGIVAELQDADLSNFRAVFMAVAMGQGQRVAELILHHARAS 534

Query: 530 NCPNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTT 587
            C + + F  E+      A   T   + +  +  +  + + +  H+V ++ N  +++   
Sbjct: 535 ECRDVERFKAEMAALVTQARKNTITLEKLQVSSLLSNVFKLLMTHKVKLESNFASIVFAI 594

Query: 588 LVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           +VLEG  R LDP  ++++  +  LLK 
Sbjct: 595 MVLEGLGRSLDPKLDILEAAKPFLLKG 621



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 68/118 (57%), Gaps = 1/118 (0%)

Query: 186 MRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLF 245
           +RA  L + F P ++  P      P    LWL+++L+  ET+GP +IK GQWA+TR DLF
Sbjct: 101 LRAGALLMKFFPLLLFYPLT-YLAPSISSLWLYLLLKATETSGPTYIKLGQWASTRRDLF 159

Query: 246 PRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
               C + S+LH +   H + +T+  + +AFG     +    ++ PV SG +AQV++A
Sbjct: 160 SEAFCAQFSKLHVQVTPHPWTHTEHFLRQAFGEDWGRVLCFEKKEPVGSGCVAQVYKA 217


>gi|332799623|ref|YP_004461122.1| 2-polyprenylphenol 6-hydroxylase [Tepidanaerobacter acetatoxydans
           Re1]
 gi|438002841|ref|YP_007272584.1| Ubiquinone biosynthesis monooxygenase UbiB [Tepidanaerobacter
           acetatoxydans Re1]
 gi|332697358|gb|AEE91815.1| 2-polyprenylphenol 6-hydroxylase [Tepidanaerobacter acetatoxydans
           Re1]
 gi|432179635|emb|CCP26608.1| Ubiquinone biosynthesis monooxygenase UbiB [Tepidanaerobacter
           acetatoxydans Re1]
          Length = 556

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 189/388 (48%), Gaps = 23/388 (5%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V+  L+  GP F+K GQ  +TRPDL P+D  ++L +L       SF   K  +E   G +
Sbjct: 60  VVMMLQELGPTFVKLGQVLSTRPDLIPKDYIEELKKLQDNVAPFSFKEAKDQMEEDLGDK 119

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VI 338
              IF   EE P+A+ SI QVHRA L+    GQ      V VKVR PG+ + I  D  ++
Sbjct: 120 TDHIFLSIEEKPLAAASIGQVHRAVLK---NGQD-----VVVKVRRPGIDKIITADLEIM 171

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
           +NLA  I   IP V+       +++FA  M  ++D  RE  ++ +F  NF   + +  PK
Sbjct: 172 LNLARLIEKHIPEVRIYDPIGKIEEFADAMHKELDFTREGFNIDKFRQNFEGDETIYVPK 231

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +      VL   Y +G  V+  +DE+  ++  +  +A  G  A++K + +  F HAD 
Sbjct: 232 VFWEATAQKVLTIEYIKGYKVTE-LDEIINNDLDRKQIAVNGAKAMMKQIFIHGFFHADP 290

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI++R   K             ++F+D G+   + K  +  L +   ++  +D +  
Sbjct: 291 HPGNIIIRPDGK-------------IVFIDFGIVGRIDKYTKNKLADLIVSIINKDTKKI 337

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
               L LS+ +   N      +V++    +   +   +  ++ + ++   V ++++ +  
Sbjct: 338 IGVLLELSQAEQELNISEIELDVEDLLDRYYGKDLKNIDMSKLLSEVFTIVAKYKIILPS 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           N   ++ + + +EG   +LDP +N+ +T
Sbjct: 398 NFTLLLKSLITIEGVGLELDPDFNIFET 425


>gi|30725855|ref|NP_849204.1| uncharacterized aarF domain-containing protein kinase 2 [Mus
           musculus]
 gi|26324508|dbj|BAC26008.1| unnamed protein product [Mus musculus]
 gi|26324518|dbj|BAC26013.1| unnamed protein product [Mus musculus]
 gi|117616974|gb|ABK42505.1| ADCK2 [synthetic construct]
 gi|148681653|gb|EDL13600.1| aarF domain containing kinase 2, isoform CRA_a [Mus musculus]
          Length = 617

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/319 (32%), Positives = 164/319 (51%), Gaps = 24/319 (7%)

Query: 317 IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAR 376
           I VAVKV HPG+   +  D +++ + +K   ++P VKWL L E V++F   M+ Q DL  
Sbjct: 297 IPVAVKVLHPGLLSQVSMDLLLMKIGSKALGLLPGVKWLSLPEIVEEFEKLMVQQTDLRY 356

Query: 377 EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSAL 436
           EA +L  F +NF+    V FP P+ PL+   +LVETYE+   VS Y  +      LK  +
Sbjct: 357 EAQNLEHFQHNFQDMASVKFPTPLRPLITRDILVETYEESVPVSSY-QQAGIPTDLKRKI 415

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV------------ 484
           A +G + LLKM+ VDNF+H D+HPGNILV+ A   S    + + + +V            
Sbjct: 416 AQLGINMLLKMIFVDNFVHGDLHPGNILVQGADGVSPSLEMQQQQVNVCDTLVATIAPAL 475

Query: 485 -----IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
                + LD G+ A+L  +D  N    F+AV    G   AE  L  ++   C + + F  
Sbjct: 476 CPLRLVLLDAGIVAKLQASDLRNFRAVFQAVVMGQGHRVAELMLHHAQANECKDVERFKA 535

Query: 540 E----VDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQR 595
           E    V +A     T E   +H +  +  + + +  H+V ++ N  +++V  +VLEG  R
Sbjct: 536 EMATLVTQARKNIVTLEK--LHVSSLLSSVFKLLMTHKVKLESNFASIVVAIMVLEGLGR 593

Query: 596 KLDPGYNVMDTLQTLLLKA 614
            LDP  ++++  +  L K 
Sbjct: 594 SLDPTLDILEAAKPFLFKG 612



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 181 CVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAAT 240
           C+ L +RA  L   F P + + P      P    LWLH++ +  ET+GP +IK GQWA+T
Sbjct: 96  CLRLGLRAGVLLAKFFPLLFLYPLT-YLAPGLSTLWLHLLFKATETSGPTYIKLGQWAST 154

Query: 241 RPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQV 300
           R DLF    C + S+LH +   H +A T+  +++AFG     +       PV SG +AQV
Sbjct: 155 RRDLFSEAFCTQFSKLHVQVTPHPWARTEYLLQQAFGEDWGSLLFFETREPVGSGCVAQV 214

Query: 301 HRA 303
           ++A
Sbjct: 215 YKA 217


>gi|74148173|dbj|BAE36249.1| unnamed protein product [Mus musculus]
          Length = 617

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/319 (32%), Positives = 164/319 (51%), Gaps = 24/319 (7%)

Query: 317 IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAR 376
           I VAVKV HPG+   +  D +++ + +K   ++P VKWL L E V++F   M+ Q DL  
Sbjct: 297 IPVAVKVLHPGLLSQVSMDLLLMKIGSKALGLLPGVKWLSLPEIVKEFEKLMVQQTDLRY 356

Query: 377 EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSAL 436
           EA +L  F +NF+    V FP P+ PL+   +LVETYE+   VS Y  +      LK  +
Sbjct: 357 EAQNLEHFQHNFQDMASVKFPTPLRPLITRDILVETYEESVPVSSY-QQAGIPTDLKRKI 415

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV------------ 484
           A +G + LLKM+ VDNF+H D+HPGNILV+ A   S    + + + +V            
Sbjct: 416 AQLGINMLLKMIFVDNFVHGDLHPGNILVQGADGVSPSLEMQQQQVNVCDTLVATIAPAL 475

Query: 485 -----IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
                + LD G+ A+L  +D  N    F+AV    G   AE  L  ++   C + + F  
Sbjct: 476 CPLRLVLLDAGIVAKLQASDLRNFRAVFQAVVMGQGHRVAELMLHHAQANECKDVERFKA 535

Query: 540 E----VDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQR 595
           E    V +A     T E   +H +  +  + + +  H+V ++ N  +++V  +VLEG  R
Sbjct: 536 EMATLVTQARKNIVTLEK--LHVSSLLSSVFKLLMTHKVKLESNFASIVVAIMVLEGLGR 593

Query: 596 KLDPGYNVMDTLQTLLLKA 614
            LDP  ++++  +  L K 
Sbjct: 594 SLDPTLDILEAAKPFLFKG 612



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 181 CVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAAT 240
           C+ L +RA  L   F P + + P      P    LWLH++ +  ET+GP +IK GQWA+T
Sbjct: 96  CLRLGLRAGVLLAKFFPLLFLYPLT-YLAPGLSTLWLHLLFKATETSGPTYIKLGQWAST 154

Query: 241 RPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQV 300
           R DLF    C + S+LH +   H +A T+  +++AFG     +       PV SG +AQV
Sbjct: 155 RRDLFSEAFCTQFSKLHVQVTPHPWARTEYLLQQAFGEDWGSLLFFETREPVGSGCVAQV 214

Query: 301 HRA 303
           ++A
Sbjct: 215 YKA 217


>gi|323450864|gb|EGB06743.1| hypothetical protein AURANDRAFT_10606, partial [Aureococcus
           anophagefferens]
          Length = 404

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/413 (31%), Positives = 190/413 (46%), Gaps = 26/413 (6%)

Query: 215 LWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIER 274
           LW   +L   E AGP   K  QW+ATR D+FP   C  +  L   A  H    ++  +  
Sbjct: 2   LWFAHLLWATEAAGPTVTKLAQWSATRRDVFPAAFCDHMERLQDAARPHGRLDSELALLD 61

Query: 275 AFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRR 334
           A G          E  PV SG +AQVHR      Y G++V     AVK+ HP    ++  
Sbjct: 62  ALGAGWRNRV-AIEPEPVGSGVVAQVHRGV----YEGRRV-----AVKLVHPATRRAVSE 111

Query: 335 DFVIIN-LAAKISSVIPAV-KWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWK 392
           D  ++  LA     + P++ K+L     V  F+  M     +  EA  L +   NF R  
Sbjct: 112 DLAVLAFLARAADGLAPSIAKFLDPVGLVDDFSEKMGRSSSMEFEADALRKLRKNFSREA 171

Query: 393 DVSFPKPVYP--LVHPAVLVETYEQGECVSRYVDELQG---HERLKSALAHIGTHALLKM 447
            V+ P+P     L     LVE++E G  ++  +  L+G    +  K A+A  G  ALLKM
Sbjct: 172 GVAIPEPRLAVFLARRGALVESFEDGLPLAECLRALEGAPEAKAAKRAIAARGLRALLKM 231

Query: 448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF 507
           L VDN +H DMH GN+LVR          + R    ++ LD G+T EL + D VN V+ F
Sbjct: 232 LFVDNCVHCDMHSGNLLVR-PHGADVAASVARGAFDLVILDAGLTLELERRDLVNFVDLF 290

Query: 508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAF-AFWGTPEGDL-------VHPA 559
            AV RRDGR      L  ++   C + +AF  +VD    A     +  L       +   
Sbjct: 291 AAVVRRDGRACGHLLLDRARYHECDDREAFAADVDRLIKAATSASDAGLSVVTLGELDIG 350

Query: 560 ECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLL 612
             + ++L+  RRHRV ++    T +V   ++EG  R LDP  +++      LL
Sbjct: 351 RLLFEVLDVCRRHRVRLEAKFATTVVAITIVEGIGRNLDPDLDLLREAAPFLL 403


>gi|81884922|sp|Q6NSR3.1|ADCK2_MOUSE RecName: Full=Uncharacterized aarF domain-containing protein kinase
           2
 gi|47124130|gb|AAH69944.1| AarF domain containing kinase 2 [Mus musculus]
          Length = 617

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/319 (32%), Positives = 164/319 (51%), Gaps = 24/319 (7%)

Query: 317 IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAR 376
           I VAVKV HPG+   +  D +++ + +K   ++P VKWL L E V++F   M+ Q DL  
Sbjct: 297 IPVAVKVLHPGLLSQVSMDLLLMKIGSKALGLLPGVKWLSLPEIVEEFEKLMVQQTDLRY 356

Query: 377 EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSAL 436
           EA +L  F +NF+    V FP P+ PL+   +LVETYE+   VS Y  +      LK  +
Sbjct: 357 EAQNLEHFQHNFQDMASVKFPTPLRPLITRDILVETYEESVPVSSY-QQAGIPTDLKRKI 415

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV------------ 484
           A +G + LLKM+ VDNF+H D+HPGNILV+ A   S    + + + +V            
Sbjct: 416 AQLGINMLLKMIFVDNFVHGDLHPGNILVQGADGVSPSLEMQQQQVNVCDTLVATIAPAL 475

Query: 485 -----IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
                + LD G+ A+L  +D  N    F+AV    G   AE  L  ++   C + + F  
Sbjct: 476 CPLRLVLLDAGIVAKLQASDLRNFRAVFQAVVMGQGHRVAELMLHHAQANECRDVERFKA 535

Query: 540 E----VDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQR 595
           E    V +A     T E   +H +  +  + + +  H+V ++ N  +++V  +VLEG  R
Sbjct: 536 EMATLVTQARKNIVTLEK--LHVSSLLSSVFKLLMTHKVKLESNFASIVVAIMVLEGLGR 593

Query: 596 KLDPGYNVMDTLQTLLLKA 614
            LDP  ++++  +  L K 
Sbjct: 594 SLDPTLDILEAAKPFLFKG 612



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 181 CVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAAT 240
           C+ L +RA  L   F P + + P      P    LWLH++ +  ET+GP +IK GQWA+T
Sbjct: 96  CLRLGLRAGVLLAKFFPLLFLYPLT-YLAPGLSTLWLHLLFKATETSGPTYIKLGQWAST 154

Query: 241 RPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQV 300
           R DLF    C + S+LH +   H +A T+  +++AFG     +       PV SG +AQV
Sbjct: 155 RRDLFSEAFCTQFSKLHVQVTPHPWARTEYLLQQAFGEDWGSLLFFETREPVGSGCVAQV 214

Query: 301 HRA 303
           ++A
Sbjct: 215 YKA 217


>gi|296210471|ref|XP_002807110.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized aarF
           domain-containing protein kinase 2 [Callithrix jacchus]
          Length = 626

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 167/330 (50%), Gaps = 29/330 (8%)

Query: 310 PGQKVKP---IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAV 366
           PG   +P   I VAVKV HPG+   +  D +++ + +++  ++P +KWL L E V++F  
Sbjct: 296 PGYHPEPGHLIPVAVKVLHPGLLSQVHMDLLLMKIGSRVLGLLPGIKWLSLPEIVEEFEK 355

Query: 367 FMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDE- 425
            M+ Q+DL  EA +L  F  NFR  K V FP P+ P V   VLVETYE+   VS Y    
Sbjct: 356 LMVQQIDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEESVPVSSYQQAG 415

Query: 426 --LQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVA-----------QKKS 472
             +    RL +A    G + LLKM+ VDNF+HAD+HPGNILV+ A           Q+  
Sbjct: 416 IPVDXRGRLXTA----GINMLLKMIFVDNFVHADLHPGNILVQGADGLFLSQEAQLQQAD 471

Query: 473 SQKRLFRSKP------HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS 526
               L  + P       ++ LD G+ AEL   D  N    F AV    G+  AE  L  +
Sbjct: 472 VCDSLAVAMPSALRPLRLVLLDAGIVAELQAPDLRNFRAVFMAVVMGQGQRVAELILHHA 531

Query: 527 KQQNCPNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVM 584
           +   C + + F  E+      A   T   + +H +  +  + + +  H+V ++ N  +++
Sbjct: 532 RASECRDVEGFKTEMATLVTQARKNTITLEKLHVSSLLSSVFKLLMTHKVKLESNFASIV 591

Query: 585 VTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
              +VLEG  R LDP  ++++  +  LLK 
Sbjct: 592 FAIMVLEGLGRSLDPKLDILEAARPFLLKG 621



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 58/94 (61%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P    LWLH++L+  ET+GP +IK GQWA+TR DLF    C + S+LH +   H + +T+
Sbjct: 124 PSVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVNPHPWTHTE 183

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           + +  AFG    +I    +  PV SG +AQV++A
Sbjct: 184 RFLREAFGEEWGDILSFEKREPVGSGCVAQVYKA 217


>gi|224095591|ref|XP_002197606.1| PREDICTED: uncharacterized aarF domain-containing protein kinase 2
           [Taeniopygia guttata]
          Length = 634

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 162/324 (50%), Gaps = 28/324 (8%)

Query: 317 IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAR 376
           + VA+KV HPG+   ++ D   + + ++I  ++P  KWL L E V++F   MM Q+DL  
Sbjct: 305 VPVAIKVLHPGLVHQVQMDLFFMKMGSRIIGLLPGFKWLSLTEIVEEFEKLMMQQIDLRY 364

Query: 377 EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSAL 436
           EA +L RF  NF     V FP P++PLV   VLVET+E+ E +S Y+    G E L+  L
Sbjct: 365 EARNLERFRQNFLDVDFVKFPTPLWPLVTADVLVETFEESEPISHYLHVEIGAE-LRQRL 423

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKR-------------------- 476
           A +G   LLKM+ VDNF+HAD+HPGNILV+      S +                     
Sbjct: 424 ARMGMDMLLKMIFVDNFVHADLHPGNILVQGTAWPGSARPEQAVVPGLSDTVVPELSDTV 483

Query: 477 LFRSKP-----HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNC 531
           +   +P      ++ LD G+ AEL   D  N    F AV    G   AE  L  ++   C
Sbjct: 484 VLGVQPSLQQLRLVLLDAGIVAELQSADLQNFRAVFTAVVLGQGERVAELILHHARANQC 543

Query: 532 PNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLV 589
            + + F  ++ E    A   T     +     +  + + +  H+V ++ N  +++   +V
Sbjct: 544 QDIERFKADMAELVTKARGNTIALGKLQVGNLLSSVFKLLMTHKVKLESNFASIIFAIMV 603

Query: 590 LEGWQRKLDPGYNVMDTLQTLLLK 613
           LEG  R LDP  ++++  + LL+K
Sbjct: 604 LEGLGRSLDPELDILEAAKPLLMK 627



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 51/94 (54%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P     WL ++ R  E AGP  +K GQWA+TR DLF    C + S+LH +   H + +T 
Sbjct: 119 PGMGARWLRLLRRAAEAAGPTCVKLGQWASTRRDLFSEAFCDEFSKLHVEVSPHPWGHTD 178

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           + + +AFG     I       PV SG +AQV++A
Sbjct: 179 ELLRKAFGEEWMGILTFPSREPVGSGCVAQVYKA 212


>gi|390357241|ref|XP_793563.3| PREDICTED: uncharacterized aarF domain-containing protein kinase
           2-like [Strongylocentrotus purpuratus]
          Length = 347

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 170/318 (53%), Gaps = 22/318 (6%)

Query: 317 IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAR 376
           I VAVKV HPG+ ES+  D  IIN+ A+I ++IP + WL   + V +F   M +Q++L  
Sbjct: 28  IPVAVKVLHPGIYESVHLDLRIINVFARILNLIPGLHWLSPVDLVDEFESLMKNQINLKL 87

Query: 377 EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVD---ELQGHERLK 433
           EA +L RF  NF +   V  P+PV+P V   +LVET+E G+ +S ++    + Q  + +K
Sbjct: 88  EAENLERFHQNFSQVPHVRIPQPVWPFVTNEILVETFESGQSISAFISCDPDNQDEKGIK 147

Query: 434 SALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQK-------------RLFRS 480
             LA +G   +LKM+ VDNF+HAD+HPGNILV+  ++   Q              +++  
Sbjct: 148 KILAQMGVDVILKMVFVDNFVHADLHPGNILVQGVEEALVQPSRTVDFHDHITEFQVYLK 207

Query: 481 KP----HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKA 536
           +P     ++ LD G+T+ L + D  N  + F A+  R G   AE     +    C + + 
Sbjct: 208 EPKNPIKLVLLDTGITSHLEERDFNNFYKVFTAIVLRKGDVVAELFAEHASSNECNDVEK 267

Query: 537 FIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQ 594
           F  ++      A   + +   +   + +++L   +  H+V ++ N  ++++  +VLEG  
Sbjct: 268 FKADMKSLVEKAHERSLQLSKMQVGQLLRELFALMIHHKVKLESNFASIILAIMVLEGLG 327

Query: 595 RKLDPGYNVMDTLQTLLL 612
           R LDP  +++   + +LL
Sbjct: 328 RSLDPNLDILKAAKPVLL 345


>gi|194209966|ref|XP_001915217.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized aarF
           domain-containing protein kinase 2 [Equus caballus]
          Length = 642

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 173/343 (50%), Gaps = 29/343 (8%)

Query: 295 GSIAQVHRASLRFRYPGQKVKP---IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPA 351
           GS A V ++S     P   ++P   I VAVKV HPG+   ++ D +++ + ++  +++P 
Sbjct: 301 GSKAVVSQSS----GPAHPLEPDHIIPVAVKVLHPGLLSQVQMDLLLMKMGSRALALLPG 356

Query: 352 VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVE 411
           +KWL L E V++F   M+ Q+DL  EA +L  F  NF     V FP P+ P V   VLVE
Sbjct: 357 IKWLSLPEIVEEFEKLMVQQIDLRYEARNLEHFQCNFLNVNSVRFPTPLRPFVTRDVLVE 416

Query: 412 TYEQGECVSRYVDE-LQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQK 470
           TYE+   VS Y    + G   LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A  
Sbjct: 417 TYEESVPVSSYQQAGIPGD--LKKKIARLGINMLLKMIFVDNFVHADLHPGNILVQGADG 474

Query: 471 KSSQKRLFRSKPHV-----------------IFLDVGMTAELSKTDRVNLVEFFKAVARR 513
            S  +     +  V                 + LD G+ AEL   D  N    F AVA  
Sbjct: 475 LSKSQEAGLQQVDVCDTLVVAMTPAPCPLRLVLLDAGIVAELQAADLRNFRAVFMAVALG 534

Query: 514 DGRTAAECTLRLSKQQNCPNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRR 571
            G+  AE  L  ++   C + + F  E+      A   T   + +  +  +  + + +  
Sbjct: 535 QGQRVAELILHHARASECRDVEGFKAEMATLVTQARKDTITLEKLQVSSLLSNVFKLLMT 594

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           H+V ++ N  +++   +VLEG  R LDP  ++++  +  LLK 
Sbjct: 595 HKVKLESNFASIVFAIMVLEGLGRSLDPKLDILEAAKPFLLKG 637



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 57/95 (60%)

Query: 209 GPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYT 268
            P    LWL ++L+  ET+GP +IK GQWA+TR DLF    C + S+LH +   H + +T
Sbjct: 139 APSVSSLWLRLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWTHT 198

Query: 269 KKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           +  +++AFG     +     + PV SG +AQV++A
Sbjct: 199 EHFLQQAFGEDWGRVLCFENQEPVGSGCVAQVYKA 233


>gi|440902731|gb|ELR53484.1| Putative aarF domain-containing protein kinase 2 [Bos grunniens
           mutus]
          Length = 625

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 164/317 (51%), Gaps = 20/317 (6%)

Query: 317 IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAR 376
           + VAVKV HPG+   ++ D +++ + +++ +V+P +KWL L E V++F   M+ Q+DL  
Sbjct: 305 VPVAVKVLHPGLLAQVQMDLLLMKMGSRVLTVLPGIKWLSLPEIVEEFEKLMVQQIDLRY 364

Query: 377 EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSAL 436
           EA +L  F  NF     V FP P+ P V   VLVETYE+   VS Y       + +K  +
Sbjct: 365 EARNLELFQCNFLNVNSVKFPTPLRPFVTKDVLVETYEESVPVSSYQHAGIPLD-VKRKI 423

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQ--KKSSQKRL---------------FR 479
           A +G + LLKM+ VDNF+HAD+HPGNILV+ A    +  + RL                R
Sbjct: 424 ARLGINMLLKMIFVDNFVHADLHPGNILVQGADGLAQGPEARLQPVDVCEALVVAVSPAR 483

Query: 480 SKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
               ++ LD G+ AEL   D  N    F AVA   G+  AE  L  ++   C + + F  
Sbjct: 484 CPLRLVLLDAGIVAELQAADLRNFRAVFMAVAMGQGQRVAELILHHARASECEDVEGFKA 543

Query: 540 EVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKL 597
           E+      A   T   + +  +  +  + + +  H+V ++ N  +++   +VLEG  R L
Sbjct: 544 EMARLVTQARKNTITLEKLQVSSLLSNVFKLLMTHKVKLESNFASIVFAIMVLEGLGRSL 603

Query: 598 DPGYNVMDTLQTLLLKA 614
           DP  ++++  +  LLK 
Sbjct: 604 DPKLDILEAAKPFLLKG 620



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 57/94 (60%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P    LWLH++L+  ET+GP +IK GQWA+TR DLF    C + S LH +   H + +T+
Sbjct: 124 PSVSSLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSRLHVQVSPHPWTHTE 183

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
             + +AFG     +    ++ PV SG +AQV++A
Sbjct: 184 HILRQAFGEDWGRVLCFEKQEPVGSGCVAQVYKA 217


>gi|281201802|gb|EFA76010.1| putative protein serine/threonine kinase [Polysphondylium pallidum
           PN500]
          Length = 732

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/303 (34%), Positives = 156/303 (51%), Gaps = 45/303 (14%)

Query: 335 DFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV 394
           DF II  A  + S +P +KWL L ESV +F   MM QVDL  EA HLS FI NF+   +V
Sbjct: 403 DFTIIYTALWLFSKMPGMKWLSLPESVLEFGKSMMKQVDLTLEAQHLSTFINNFKNNNEV 462

Query: 395 SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFI 454
                    V  +VLVET+E GE +  Y+     +      LA IG  A L+M+LVDNFI
Sbjct: 463 ---------VSKSVLVETFEPGEPIMDYI---STNSPFNPTLARIGLDAYLQMMLVDNFI 510

Query: 455 HADMHPGNILVRVA----------QKKSSQ---KRLFRSKPHVI---------------- 485
           HAD+HPGN+LVR            +++S+Q    +   + PH+I                
Sbjct: 511 HADLHPGNVLVRDPTLHRRSQFHHEQQSNQLLITKQHHANPHMIVLKTLDLQRKATPLPK 570

Query: 486 --FLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPK--AFIEEV 541
              LDVG+  EL  TD+ +  E F  V + +G+  AE  ++ +K+  C   +   F E++
Sbjct: 571 LVLLDVGLVTELDTTDKSHFKELFTEVVKGNGKAGAELIIKYAKEAQCSEQEIFEFKEKM 630

Query: 542 DEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGY 601
            E F      +   +H    M Q+L  VR + V ++ N  T+++ T+VLEG  ++LDP  
Sbjct: 631 GEIFNKVQNSKLSEIHVGHLMSQILSLVREYHVKLESNFATLVMGTIVLEGLGKQLDPNI 690

Query: 602 NVM 604
           +++
Sbjct: 691 SLL 693


>gi|329663950|ref|NP_001192587.1| uncharacterized aarF domain-containing protein kinase 2 [Bos
           taurus]
 gi|296488032|tpg|DAA30145.1| TPA: aarF domain containing kinase 2 [Bos taurus]
          Length = 625

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/317 (32%), Positives = 164/317 (51%), Gaps = 20/317 (6%)

Query: 317 IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAR 376
           + VAVKV HPG+   ++ D +++ + +++ +V+P +KWL L E V++F   M+ Q+DL  
Sbjct: 305 VPVAVKVLHPGLLAQVQMDLLLMKMGSRVLTVLPGIKWLSLPEIVEEFEKLMVQQIDLRY 364

Query: 377 EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSAL 436
           EA +L  F  NF     V FP P+ P V   VLVETYE+   VS Y       + +K  +
Sbjct: 365 EARNLELFQCNFLNVNSVKFPTPLRPFVTKDVLVETYEESVPVSSYQHAGIPLD-VKRKI 423

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQ--KKSSQKRL---------------FR 479
           A +G + LLKM+ VDNF+HAD+HPGNILV+ A    +  + RL                R
Sbjct: 424 ARLGINMLLKMIFVDNFVHADLHPGNILVQGADGLAQGPEARLQPVDVCEALVVAVSPAR 483

Query: 480 SKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
               ++ LD G+ AEL   D  N    F AVA   G+  AE  L  ++   C + + F  
Sbjct: 484 CPLRLVLLDAGIVAELQAADLRNFRAVFMAVAMGQGQRVAELILHHARASECEDVEGFKA 543

Query: 540 EVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKL 597
           E+      A   T   + +  +  +  + + +  H+V ++ N  +++   +VLEG  R L
Sbjct: 544 EMARLVTQARKNTITLEKLQVSSLLSNVFKLLMTHKVKLESNFASIVFAIMVLEGLGRSL 603

Query: 598 DPGYNVMDTLQTLLLKA 614
           DP  ++++  +  LLK 
Sbjct: 604 DPKLDILEAAKPFLLKG 620



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 57/94 (60%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P    LWLH++L+  ET+GP +IK GQWA+TR DLF    C + S LH +   H + +T+
Sbjct: 124 PSVSSLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSRLHVQVSPHPWTHTE 183

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
             + +AFG     +    ++ PV SG +AQV++A
Sbjct: 184 HILRQAFGEDWGRVLCFEKQEPVGSGCVAQVYKA 217


>gi|426228111|ref|XP_004008158.1| PREDICTED: uncharacterized aarF domain-containing protein kinase 2
           [Ovis aries]
          Length = 626

 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 164/317 (51%), Gaps = 20/317 (6%)

Query: 317 IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAR 376
           + VAVKV HPG+   ++ D +++ + +++ +++P +KWL L E V++F   M+ Q+DL  
Sbjct: 306 VPVAVKVLHPGLLAQVQMDLLLMKMGSRVLALLPGIKWLSLPEIVEEFEKLMVQQIDLRY 365

Query: 377 EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSAL 436
           EA +L  F  NF     V FP P+ P V   VLVETYE+   VS Y       + +K  +
Sbjct: 366 EARNLELFQCNFLNVNSVKFPTPLRPFVTKDVLVETYEESVPVSSYQHAGIPLD-VKRKI 424

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQ--KKSSQKRL---------------FR 479
           A +G + LLKM+ VDNF+HAD+HPGNILV+ A    +  + RL                R
Sbjct: 425 AQLGINMLLKMIFVDNFVHADLHPGNILVQGADGLAQGPEARLQRVDVCEALAVAVSPAR 484

Query: 480 SKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
               ++ LD G+ AEL   D  N    F AVA   G+  AE  L  ++   C + + F  
Sbjct: 485 CPLRLVLLDAGIVAELQAADLRNFRAVFMAVAMGQGQRVAELILHHARASECEDVEGFKA 544

Query: 540 EVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKL 597
           E+      A   T   + +  +  +  + + +  H+V ++ N  +++   +VLEG  R L
Sbjct: 545 EMARLVTQARKNTITLEKLQVSSLLSNVFKLLMTHKVKLESNFASIVFAIMVLEGLGRSL 604

Query: 598 DPGYNVMDTLQTLLLKA 614
           DP  ++++  +  LLK 
Sbjct: 605 DPKLDILEAAKPFLLKG 621



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 57/94 (60%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P    LWLH++L+  ET+GP +IK GQWA+TR DLF    C + S LH +   H + +T+
Sbjct: 124 PSVSSLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSRLHVQVSPHPWTHTE 183

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
             + +AFG     +    ++ PV SG +AQV++A
Sbjct: 184 HFLRQAFGEDWERVLFFEKQEPVGSGCVAQVYKA 217


>gi|374994168|ref|YP_004969667.1| unusual protein kinase [Desulfosporosinus orientis DSM 765]
 gi|357212534|gb|AET67152.1| putative unusual protein kinase [Desulfosporosinus orientis DSM
           765]
          Length = 559

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 187/401 (46%), Gaps = 32/401 (7%)

Query: 207 SFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFA 266
           SFG + R          +E  GP +IK GQ A+TR D+FP ++  +L +L    P  SFA
Sbjct: 54  SFGERIR--------LVIEELGPTYIKIGQIASTRADIFPPEILSELEKLQENVPSFSFA 105

Query: 267 YTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326
             ++ IE   G  L EIF  F+E  +A+ SI QVHRA  R R  G+      VAVKV+ P
Sbjct: 106 EVREIIEEELGYPLEEIFSQFDEEVIAAASIGQVHRA--RLRATGE-----YVAVKVQRP 158

Query: 327 GVGESIRRDF-VIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFI 385
            +   I  D  ++++LA    + +  ++ L+L + V++FA  + +++D   EA +  R  
Sbjct: 159 RIKAMIETDLEILLDLATMTENRMKRMERLQLRDVVEEFAKSLRNELDYTIEARNAERIS 218

Query: 386 YNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALL 445
             F+  K V  PK  +      VL   + +G  ++++ +EL  H      LA     AL 
Sbjct: 219 KQFKEDKSVYIPKIHWDFTTRRVLTMEFVEGLRLNQF-EELDKHGYDHKQLAEQLVKALF 277

Query: 446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVI-FLDVGMTAELSKTDRVNLV 504
             +L++ F HAD HPGNI              F  K  VI F+D GM   L+   + N  
Sbjct: 278 HQILIEGFFHADPHPGNI--------------FLLKGGVISFIDFGMVGRLTLDMKHNFA 323

Query: 505 EFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQ 564
               A+ R++  +  +  LR+       N      +VDE    +       +   E +  
Sbjct: 324 SLIIAMMRQNTESMIKAVLRIGIVPEEVNLTLLTNDVDELRDKYMDVPLSRIGLGEAISD 383

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
           L E   RHR+ +  +   V    L+LEG   KLDP  ++MD
Sbjct: 384 LFEVAFRHRIRIPSDFTMVAKCLLILEGMVEKLDPALSIMD 424


>gi|395539538|ref|XP_003771725.1| PREDICTED: uncharacterized aarF domain-containing protein kinase 2
           [Sarcophilus harrisii]
          Length = 717

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 166/318 (52%), Gaps = 20/318 (6%)

Query: 317 IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAR 376
           I  A+KV HPG+   ++ D  ++ + ++I  +IP VKWL L E V++F   M+ Q+DL  
Sbjct: 310 IPAAIKVLHPGLLAQVQVDLFLMKIGSRILGLIPGVKWLSLTEIVEEFEKLMVQQIDLRY 369

Query: 377 EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSAL 436
           EA +L  F +NF     V FP P+ P V   VLVET+E+   VS Y  + +   +LK  +
Sbjct: 370 EARNLECFQHNFMDVNFVRFPTPLQPFVTRDVLVETFEESVPVSWY-QKSEIPMKLKGKI 428

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVA----QKKSSQKRL--------FRSKP-- 482
           A +G   LLKM+ VDNF+HAD+HPGNILV+ A    + +  QK L          S+P  
Sbjct: 429 AKLGIDMLLKMVFVDNFVHADLHPGNILVQGADFPKESQGGQKSLEDALDTLVSESRPAS 488

Query: 483 ---HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIE 539
               ++ LD G+ A L   D  N    F AVA   G   AE  L+ ++   C + + F  
Sbjct: 489 SPLRLVLLDAGIVAGLQAADLENFRAVFTAVAVGQGERVAELILQHARASECRDVEKFKA 548

Query: 540 E--VDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKL 597
           E  V    A   T   + +  A  +  + + +  H+V ++ N  +++   +VLEG  R L
Sbjct: 549 EMAVLVTQARKNTITLEKLQVANLLSSVFKLLMTHKVKLESNFASIVFAIMVLEGLGRSL 608

Query: 598 DPGYNVMDTLQTLLLKAD 615
           DP  ++++  +  L+K+ 
Sbjct: 609 DPKMDILEAAKPYLIKSS 626



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 1/135 (0%)

Query: 169 AFVTSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAG 228
            F + V  +L   +   +RA  L V F+P +++ PF      +F  LWL  +L   E++G
Sbjct: 89  GFASGVWPNLAFGLRTGLRACVLLVKFAPLLLLYPFT-YLAARFYRLWLRWLLLATESSG 147

Query: 229 PAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFE 288
           P +IK GQWA+TR DLF  + C   S LH +   H++A+T++ +++ FG   +       
Sbjct: 148 PTYIKLGQWASTRRDLFSEEFCAHFSRLHVQVAPHTWAHTRRLLQKVFGTEWARALRFES 207

Query: 289 EAPVASGSIAQVHRA 303
           + PV SG +AQV++A
Sbjct: 208 QEPVGSGCVAQVYKA 222


>gi|53803824|ref|YP_114308.1| ubiquinone biosynthesis protein AarF [Methylococcus capsulatus str.
           Bath]
 gi|53757585|gb|AAU91876.1| putative ubiquinone biosynthesis protein AarF [Methylococcus
           capsulatus str. Bath]
          Length = 568

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 186/381 (48%), Gaps = 24/381 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP+FIK GQ  +TR DL P +  ++LS L  + P   F   +  +ER  G  + ++
Sbjct: 75  LEEMGPSFIKLGQILSTRVDLLPPEWIEELSHLQRRVPPLPFESLRWQLERDLGAPVDKV 134

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           F  F+  P+A+ SIAQVHRA L     G++     V VK+R PG+ ++I  D  ++  LA
Sbjct: 135 FAEFDVRPIAAASIAQVHRARL---LTGEE-----VVVKIRRPGITKTIDADLRLMAKLA 186

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             I    P + +LR  E V QF + +  +++   E  +  R   NFR    +  P+  + 
Sbjct: 187 KLIEFEFPELDYLRPSEIVHQFGLSIHRELNFINECRNTDRLAANFRTDPRIVIPRVHWQ 246

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
            V   V V  Y +G   +  +D ++  +  +  LA +G  A+LKM+L+D F HAD H GN
Sbjct: 247 YVRERVCVMDYIEG-IDAMDLDAVRAADLDQRTLARVGADAMLKMILLDGFFHADPHHGN 305

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           +             L+     + FLD GM   L +  R  LV+   A+  RD +TAA+  
Sbjct: 306 L-------------LYLPNNRIAFLDFGMVGRLPELRRHQLVDLLSAIVGRDAQTAADVL 352

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCT 582
           L  +   N  +P   + ++D     +       +   + +  L + +R+HR+ +  ++  
Sbjct: 353 LDWAATVNV-DPDLLVADMDNLIDDYHGATLRQLSLTQMLTDLTQLMRQHRLALPPDLTL 411

Query: 583 VMVTTLVLEGWQRKLDPGYNV 603
           +    + L+G  ++ DP +++
Sbjct: 412 LFRALITLDGIGKQNDPDFDI 432


>gi|357404278|ref|YP_004916202.1| 2-octaprenylphenol hydroxylase [Methylomicrobium alcaliphilum 20Z]
 gi|351716943|emb|CCE22608.1| 2-octaprenylphenol hydroxylase [Methylomicrobium alcaliphilum 20Z]
          Length = 553

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 189/409 (46%), Gaps = 50/409 (12%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           + R LE  GP F+K GQ  ATRPDLF      +  +L  +A           +E   G  
Sbjct: 64  IRRVLEEMGPTFVKLGQIFATRPDLFSPAWIAEFEKLQDQARPAPIDKILAQLEEDLGAP 123

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
             E+F  F++ P+A+ SI QVH+ASL     G +V      VK+R PG+  ++  D  ++
Sbjct: 124 PHEVFATFDKTPIAAASIGQVHKASLE---DGTQV-----IVKIRRPGIRPTVEADLRLL 175

Query: 340 NLAAKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
           N   ++++  I  ++     E V+QF + M  ++DLA E  +  R   NF++ + +  PK
Sbjct: 176 NQMTEVAAREIKDLRRYNPQEIVRQFTLSMRRELDLAIEGRNSERMRVNFKKSRSIIIPK 235

Query: 399 PVYPLVHPAVLVETYEQGEC----VSRYVDELQGHE--RL------KSALAHIGTHALLK 446
                         Y Q  C    V  Y+D + GH+  R+      +  LA  G  A+LK
Sbjct: 236 -------------VYWQWTCERVNVQEYIDGISGHDIDRIDYSNLDRKKLAKTGADAVLK 282

Query: 447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEF 506
           M+L D F HAD HPGN               F S   + F+D GM   L+   R  +V  
Sbjct: 283 MILEDGFFHADPHPGNC-------------FFLSGNRIAFIDFGMVGRLTDERRNQVVNL 329

Query: 507 FKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAF-AFWGTPEGDLVHPAECMQQL 565
              +  RD     +  L+ +  ++  N  A   E+D     +   P  DL H  E +  L
Sbjct: 330 LHGLVERDPDIVVKILLKWA-DKSMANKDALTLEIDNFIDQYHDIPLKDL-HIGELLFNL 387

Query: 566 LEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
              +R H++N+  ++  ++ T + LEG  R+LDP +N++ T   LL +A
Sbjct: 388 TNLLRDHQLNLPADLTLLIKTFITLEGLGRQLDPSFNLVVTATPLLKRA 436


>gi|323455475|gb|EGB11343.1| hypothetical protein AURANDRAFT_70875 [Aureococcus anophagefferens]
          Length = 829

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 204/463 (44%), Gaps = 42/463 (9%)

Query: 171 VTSVLYSLVECVILLMRALYLGVLFSP------SIMMAPFADSFGPQFRELWLHVVLRTL 224
           V  +   L   + LL R+  LG+  +P      ++         G +  E W    L ++
Sbjct: 369 VEDIFSRLETTLRLLRRSCELGLYVAPLALSRVAVEACKLVGIAGAE--ERWWDYALWSV 426

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  GP  +K  QWAA RPDLFP    K+ S LH     H+F +T + +  A G    +  
Sbjct: 427 EGMGPTAVKLCQWAAGRPDLFPAAATKRFSRLHDAVRPHAFHHTDRALAAALGADWRDTL 486

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
           +  E   + SG IAQV+  +    + GQ+     VAVKV HPGV E++  D  ++     
Sbjct: 487 ELDERRLLGSGCIAQVYAGT----HDGQR-----VAVKVVHPGVREAVETDMALLAFCVG 537

Query: 345 ISSVIP--AVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                   A ++L +  SV +F   M SQ+DL  EA++L R   +F R   V  P+PV  
Sbjct: 538 CGERFAPGAFRYLAVGGSVHRFGAIMRSQLDLRTEASNLERLHAHFVRDDSVVVPRPVGR 597

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
              P VLVE +  G  V   +D  +G E   + +A  G  A+LKM+L  NF+H D+HPGN
Sbjct: 598 RRSPDVLVEEFVAGVPV---LDFARGDEARAAKIAEAGARAVLKMVLHHNFVHGDLHPGN 654

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           +LV               +  ++ LD G+  E+      ++V   KA+    G  A    
Sbjct: 655 MLV-------------NDRAQLVLLDAGICVEIGDRAHEDMVSILKAMLEARGADAGRLI 701

Query: 523 LRLSKQQ------NCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
           L     +      +  +   F+  +DE  A     +      AE M  +      HRV +
Sbjct: 702 LGAHANRGDFGAIDRESEARFVTGIDEMVA-RSRDQPIFESMAEYMSTICGLAVSHRVVL 760

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           D +  +V +   ++EG    + P +  ++    + L+A   +S
Sbjct: 761 DASFVSVALAIKIMEGLCLGISPDFPFLEIAAPMFLQAQMTRS 803


>gi|398804349|ref|ZP_10563344.1| 2-polyprenylphenol 6-hydroxylase [Polaromonas sp. CF318]
 gi|398094068|gb|EJL84439.1| 2-polyprenylphenol 6-hydroxylase [Polaromonas sp. CF318]
          Length = 517

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 190/396 (47%), Gaps = 27/396 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP F+K+GQ  +TR DL P D+  +L+ L  + P    A     IE+AFGR L  
Sbjct: 56  ALESLGPIFVKFGQVMSTRRDLLPPDIADELARLQDRVPPFESAVAVAIIEKAFGRPLDR 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           IF  FE+ PVAS SIAQVH A+L    P  +     VAVKV  P +  +I +D  ++++ 
Sbjct: 116 IFASFEQTPVASASIAQVHFATL----PNGR----EVAVKVLRPNMLPAIEKDLALMHMM 167

Query: 343 AK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +       K L+  E V +F  ++  ++DL REAA+ ++   N +    V  P+ V+
Sbjct: 168 AGWVEGASADGKRLKPREVVAEFDKYLHDELDLLREAANAAQLRRNMQDLDLVMIPEMVW 227

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P V+V    +G  +S+    L+    +K  LA  G       +  D F HADMHPG
Sbjct: 228 DFCMPDVMVMERMKGVPISQVQRLLEAGVDMKK-LARDGVTIFFTQVFRDGFFHADMHPG 286

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V +A +   +          I LD G+   L++ D+  L + F A  +RD +  AE 
Sbjct: 287 NIQVSLAPETFGR---------YISLDFGIVGTLTEVDKEYLAQNFSAFFQRDYKRVAEL 337

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVD 577
            L    +     P+  ++E++ A      P  D     +     + +L +  RR  V + 
Sbjct: 338 HL----ESGWVPPETRVDELEAAIRACCEPYFDRPLREISLGLVLMRLFQTSRRFHVEIQ 393

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 394 PQLVLLQKTLLNIEGLGRELDPDLDLWSTAKPFLEK 429


>gi|386817174|ref|ZP_10104392.1| 2-octaprenylphenol hydroxylase [Thiothrix nivea DSM 5205]
 gi|386421750|gb|EIJ35585.1| 2-octaprenylphenol hydroxylase [Thiothrix nivea DSM 5205]
          Length = 521

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 189/393 (48%), Gaps = 29/393 (7%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           + R LE  GP FIK+GQ  +TR DL P D+  +L+ L  + P  S A ++K IE+A+G+ 
Sbjct: 58  IRRALEDLGPIFIKFGQMLSTRRDLLPDDIAAELTRLQDRVPPFSSAESRKLIEKAYGKP 117

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           ++E+F  FE  P+AS SIAQVH A L   + G+      V VKV  PG+ ++IR+D  ++
Sbjct: 118 VTEVFQHFETDPMASASIAQVHAAQL---WDGKD-----VVVKVLRPGIRKTIRQDVELM 169

Query: 340 NLAAKISSVI-PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
            + A++        + LR  E V ++   +  ++DL REAA+ S+   NF + K +  P+
Sbjct: 170 YIIARLVQFYWKEGRRLRPVEVVAEYEKTIFDELDLMREAANASQLHRNFEQSKMLYVPE 229

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +   HP V+V     G  V   + +L+        L  +G       +   NF HADM
Sbjct: 230 IYWDYTHPNVIVMERIYGIPVGD-IQKLRELNVNFKRLGELGVEVFFTQVFRHNFFHADM 288

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI V  +  +         +P  + +D G+   LS  D+  L E F A   RD +  
Sbjct: 289 HPGNIFVNASNPQ---------EPQYMAVDFGIVGTLSPDDKRYLAENFYAFFNRDYKRV 339

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHR 573
           AE    L  +     P   +EE + A        +  P  D+      + +L +  RR  
Sbjct: 340 AE----LHVESGWVPPTTRVEEFESAIRTVCEPIFNLPIKDISF-GHFLLRLFQTARRFN 394

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           + V   +  +  T L +EG  R+L P  ++  T
Sbjct: 395 MEVQPQLVLLQKTLLNIEGLGRQLYPDLDLWAT 427


>gi|440793109|gb|ELR14304.1| ubiquinone biosynthesis protein AarF family protein, putative
           [Acanthamoeba castellanii str. Neff]
          Length = 473

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 101/263 (38%), Positives = 145/263 (55%), Gaps = 14/263 (5%)

Query: 354 WLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETY 413
           WL+L  +VQ FA  M +Q +LA EA +L  F  NFR  + + FP PV    HP VLVE++
Sbjct: 196 WLQLGANVQNFASRMSAQCNLAVEAGNLVHFKQNFRDARSIRFPTPVEGFYHPLVLVESF 255

Query: 414 EQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSS 473
           E G  V R+  E    + ++  +A +G  A LKM+LVDNF+HAD+HPGNILV        
Sbjct: 256 EPGIHVERFTREDIAPD-VRKTIASVGMDAFLKMMLVDNFVHADLHPGNILV-------D 307

Query: 474 QKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPN 533
             R   S P V+ LDVG+  +LS+ DR N ++ F AV   D   AA     ++  Q+   
Sbjct: 308 DGRDAGSSPQVVLLDVGLITQLSEKDRDNFLKLFSAVVAGD---AALVGHLITDGQDHLT 364

Query: 534 PKA---FIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVL 590
           P+    F EEV    A       D V  +E   ++L   RR++V ++ N  T+++ T+V+
Sbjct: 365 PQVVQQFTEEVGRLMAKVKLTRLDEVPLSEIFFEMLSIARRNKVILEANFTTLIIGTVVI 424

Query: 591 EGWQRKLDPGYNVMDTLQTLLLK 613
           EG  R+LDP  N++     LL+K
Sbjct: 425 EGLGRQLDPDLNLLQRAVPLLVK 447


>gi|428170445|gb|EKX39370.1| hypothetical protein GUITHDRAFT_143567 [Guillardia theta CCMP2712]
          Length = 507

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 169/334 (50%), Gaps = 73/334 (21%)

Query: 183 ILLMRALYLGVLFSP--SIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAAT 240
           I+  RA+YL ++F+P  ++ +    +   P  RE WL ++++TLE AG +F+K+GQW + 
Sbjct: 71  IVARRAVYLVIVFAPFTAVSLVQTLNPNDPWLREYWLEMMVKTLEKAGCSFMKFGQWLSM 130

Query: 241 RPDLFPRDLCKKLSELHSK-------APEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVA 293
           RPDLFP D+ + LS L +        AP H F YT+K IE +FGR + E+FD F++ PVA
Sbjct: 131 RPDLFPPDVIRALSRLRNDGKMTRRDAPSHDFEYTRKAIEESFGRTIEELFDEFDKVPVA 190

Query: 294 SGSIAQVHRASLRFRYP---GQKVKPIVVAVKVRHPGVGESIRRD----FVIINLAAKIS 346
           SG+IAQVH+  L+  +    GQ+     VAVKVRHP V      D    F +++   K  
Sbjct: 191 SGTIAQVHKGVLKPEFALEGGQR----EVAVKVRHPQVVHETYYDTRLLFDVLDWVGKT- 245

Query: 347 SVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-LVH 405
                     L ++ Q F      +VDL  EA +L  F +NF+  + + FP+ V+P LV 
Sbjct: 246 ----------LLQTSQPF-----DKVDLTWEAYNLQLFNWNFQGEEIIKFPQ-VFPHLVS 289

Query: 406 PAVLVETYEQGECVSRYVDELQGHER-----------------------------LKSAL 436
           P+VL ET+  G  V     E+    +                              K  +
Sbjct: 290 PSVLTETWVNGTIVQDIFSEVGDKAKATYQRFRHDMTGLFLILLKGCCCSDEVHATKKKM 349

Query: 437 AHIGTHAL------LKMLLVDNFIHADMHPGNIL 464
           A +   ++      +KM L DN+IH D+H GN++
Sbjct: 350 AQVDEQSIAIFDMNMKMFLRDNYIHGDLHGGNLM 383


>gi|224827156|ref|ZP_03700252.1| ABC-1 domain protein [Pseudogulbenkiania ferrooxidans 2002]
 gi|347540844|ref|YP_004848269.1| ABC-1 domain containing protein [Pseudogulbenkiania sp. NH8B]
 gi|224600665|gb|EEG06852.1| ABC-1 domain protein [Pseudogulbenkiania ferrooxidans 2002]
 gi|345644022|dbj|BAK77855.1| ABC-1 domain protein [Pseudogulbenkiania sp. NH8B]
          Length = 560

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 190/385 (49%), Gaps = 26/385 (6%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  GP FIK GQ  +TR D+FP++   +  +L S  P          +++A G  + E+F
Sbjct: 69  EELGPTFIKLGQILSTRVDVFPQEWITEFEKLQSNVPPLHPEQVPHLVKQALGHPIEELF 128

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLAA 343
             FE  P+ S SIAQVHRA+L+           VVAVK+R PG+   ++ D  I+ ++A 
Sbjct: 129 AEFEMEPIGSASIAQVHRATLK--------DGTVVAVKLRRPGILPKVQADLRILEHIAG 180

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            I    P  +  +  E V +FA  +  +++LA EA ++ RF  +F     V  P   +  
Sbjct: 181 LIELEFPDARRYQPTEIVNEFARSLNREMNLAIEARNMERFRRDFADDPFVHVPGVYWDY 240

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
            +PAV V+ +  G+  +R VD LQ        LA  G  A+L+M+L++ F HAD HPGN+
Sbjct: 241 TNPAVNVQDFIDGQAATR-VDALQAAGLDPITLADRGADAVLRMILINGFFHADPHPGNV 299

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
                        +F+    + F+D GM   +S   R  +V+   A++ RD R   +  +
Sbjct: 300 -------------IFQPDNCIAFIDFGMVGRISHARRDEIVDLLAALSGRDERAMIDVLI 346

Query: 524 RLSKQQNCPNPKAFIEEVDE-AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCT 582
             +        K F +++ E  F +   P  DL + ++ +  ++  +R H + +  ++  
Sbjct: 347 EWTGTTPVDEDK-FADDISEFMFQYEHVPLKDL-NISQLIVDIMALIRDHGIVLPPDMAM 404

Query: 583 VMVTTLVLEGWQRKLDPGYNVMDTL 607
           +    + LEG  R+L+P + +++ L
Sbjct: 405 LFKALITLEGLGRQLNPDFQLVEHL 429


>gi|351730247|ref|ZP_08947938.1| putative ubiquinone biosynthesis protein UbiB [Acidovorax radicis
           N35]
          Length = 521

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 189/396 (47%), Gaps = 23/396 (5%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P         TIERAF R + E
Sbjct: 56  ALERLGPIFVKFGQVLSTRRDLLPPDVADELARLQDRVPPFDPEIAMATIERAFRRPVDE 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  FE  PVAS SIAQVH A+LR R   ++     VAVKV  PG+   I +D  ++ + 
Sbjct: 116 VFTSFERVPVASASIAQVHFATLRDRNGIER----EVAVKVLRPGMLPVIEKDLGLMRMM 171

Query: 343 AK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  + ++    K L+  E V +F  ++  ++DL REAA+ ++   N +    V  P+ ++
Sbjct: 172 AGWVENLSADGKRLKPREVVAEFDNYLHDELDLVREAANAAQLRRNMQGLDLVLIPEILW 231

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
              HP V+V     G  +S+ +D L+        LA  G       +  D F HADMHPG
Sbjct: 232 DFCHPEVMVMQRMNGVPISQ-MDRLRDAGVDIPKLARDGVTIFFTQVFRDGFFHADMHPG 290

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V +      +          I LD G+   L+++D+  L + F A  RRD +  AE 
Sbjct: 291 NIQVSLDPATFGR---------YISLDFGIVGTLTESDKEYLAQNFVAFFRRDYKRVAE- 340

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVD 577
              L  +     P+  + +++ A      P  D     +     + +L +  RR  V + 
Sbjct: 341 ---LHIESGWVPPETRVNDLESAIRAVCEPYFDRPLKEISLGMVLMRLFQTSRRFHVEIQ 397

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 398 PQLVLLQKTLLNIEGLGRELDPELDLWSTAKPFLEK 433


>gi|74316231|ref|YP_313971.1| ubiquinone biosynthesis protein UbiB [Thiobacillus denitrificans
           ATCC 25259]
 gi|74055726|gb|AAZ96166.1| 2-polyprenylphenol 6-hydroxylase [Thiobacillus denitrificans ATCC
           25259]
          Length = 522

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 188/404 (46%), Gaps = 34/404 (8%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE+ GP F+K+GQ  +TRPDL P D+ ++LS L  + P         TIE A+   LS
Sbjct: 54  RALESLGPIFVKFGQLLSTRPDLVPADIVEELSRLQDRVPPFPSVQAIATIEAAYRTPLS 113

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
             F  F+  PVAS S+AQVH A L   + G +     VAVKV  PG+   I  D  ++ L
Sbjct: 114 SAFAEFDATPVASASVAQVHFARL---HDGTE-----VAVKVLRPGIAPVIAHDVSLMYL 165

Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           AA  +  +    K LR  E V +F   +  ++DL REA++ S+   NFR    ++ P+  
Sbjct: 166 AAALVEKLFADGKRLRPREVVSEFEKHLADELDLMREASNCSQLRRNFRDSPLLAVPEVY 225

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFI 454
           +      V+V     G  VS+        ERL+ A      LA  G       +  D F 
Sbjct: 226 WDYCSADVMVMDRMDGIPVSQI-------ERLREAGVDFGRLAATGVEIFFTQVFRDGFF 278

Query: 455 HADMHPGNILVRVAQK---KSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVA 511
           HADMHPGNILVR A+      +   + R   +V  LD G+   L++ D+  L   F A  
Sbjct: 279 HADMHPGNILVRPARDLAGSPAAGEVARVDQYVA-LDFGIMGTLTEIDKQYLARNFLAFF 337

Query: 512 RRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLE 567
           RRD R  A   L    +     P   ++E++ A      P  D     +     + QL +
Sbjct: 338 RRDYRGVALAHL----ESGWVPPDTRVDELEAAVRAVCEPVFDRPLKDISFGRVLLQLFQ 393

Query: 568 KVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             RR  V +   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 394 ASRRFNVEIQPQLALLQKTLLNIEGLGRQLDPDLDLWKTAKPFL 437


>gi|332296589|ref|YP_004438512.1| ABC transporter [Thermodesulfobium narugense DSM 14796]
 gi|332179692|gb|AEE15381.1| ABC-1 domain-containing protein [Thermodesulfobium narugense DSM
           14796]
          Length = 561

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 186/392 (47%), Gaps = 31/392 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP FIK+GQ  + RPDL      ++LS+L    P   F   ++ IE  F R L E
Sbjct: 71  VLEELGPTFIKFGQILSCRPDLLSNQFIEELSKLQDNVPPFPFIKVREVIESQFKRPLEE 130

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +F  F+E P+A+GS+AQVH+A  + +          VAVKV+ PG+ + I  D  I+ + 
Sbjct: 131 MFTSFDETPIAAGSLAQVHKAITKTKKE--------VAVKVQRPGIEKIIESDIKILYDF 182

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +      + +   D  V++FA  +  ++D  RE  ++ RF   F+  K V FPK  +
Sbjct: 183 AILLKKHFSEIGYYEPDRIVEEFAKTIRKELDFIREGRNIERFSKCFKNDKTVYFPKVYW 242

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
            L  P VL   Y  G  +S  VD        K ++A  G H +L+ +   +F HAD HPG
Sbjct: 243 DLTAPKVLTMEYINGYKLSE-VDNFPDLNVDKKSVALNGAHFILREIFECHFFHADPHPG 301

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI +              +   + F+D GM   L  T    L+   +A+  ++     + 
Sbjct: 302 NIFL-------------LNNNVMAFVDFGMVGILDDTIVDWLISVLRAILDKNVNLLIKA 348

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAF----WGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
            L L+     P PK  I    + F F    +  P  DL +    +++ L+ +R++++   
Sbjct: 349 ILSLNI---APQPKDIINFRIDLFDFLERYYEVPLKDL-NVGTLIEEFLDIIRKYKIRFP 404

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQT 609
             +  ++   ++ EG  R L P +N+++ L++
Sbjct: 405 TTLVLMLRALVIHEGIGRVLYPEFNMIEYLRS 436


>gi|89900088|ref|YP_522559.1| putative ubiquinone biosynthesis protein UbiB [Rhodoferax
           ferrireducens T118]
 gi|89344825|gb|ABD69028.1| 2-octaprenylphenol hydroxylase [Rhodoferax ferrireducens T118]
          Length = 521

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 203/452 (44%), Gaps = 43/452 (9%)

Query: 186 MRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLR------------------TLETA 227
           M  L+ GV     ++     + F   FR+ WLH + R                   LE+ 
Sbjct: 1   MTRLFRGVFIVWMMLRYGLDELFLTSFRKPWLHALARIVSIGRNLDAPRGQRIREALESL 60

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGF 287
           GP F+K+GQ  +TR DL P D+  +L+ L  + P         +IERAF +++ +IF  F
Sbjct: 61  GPIFVKFGQVLSTRRDLLPLDIADELARLQDRVPPFDSDVAIASIERAFNKKVGDIFVSF 120

Query: 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK-IS 346
           E  PVAS SIAQVH A L+ R   ++     VAVKV  PG+  +I +D  ++ + A  + 
Sbjct: 121 ERVPVASASIAQVHFAVLKDRDGRER----EVAVKVLRPGMMLAIEKDLSLMRMMAGWVD 176

Query: 347 SVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHP 406
           S+    K L+  E V +F  ++  ++DL REA+  ++   N      V  P+  +     
Sbjct: 177 SLSNGGKRLKPREVVAEFDKYLHDELDLIREASSAAQLRRNMSGLNLVLIPEMFWDYCTT 236

Query: 407 AVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVR 466
            V+V     G  VS+ VD L+        LA  G       +  D F HADMHPGNI V 
Sbjct: 237 DVIVMERMHGVPVSQ-VDRLKAAGVDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIQVS 295

Query: 467 VAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS 526
           +      +          I LD G+   L+ +D+  L + F A  RRD +  AE    L 
Sbjct: 296 IDPATFGR---------YISLDFGIVGTLTASDKEYLAQNFTAFFRRDYKRVAE----LH 342

Query: 527 KQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVC 581
            +     P   ++E++ A       ++  P  D       + +L +  RR  V +   + 
Sbjct: 343 IESGWVPPATRVDELESAIRSVCEPYFDRPLKDF-SLGIVLMRLFQTSRRFHVEIQPQLV 401

Query: 582 TVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 402 LLQKTLLNIEGLGRQLDPDLDLWSTAKPFLEK 433


>gi|407937662|ref|YP_006853303.1| ubiquinone biosynthesis protein UbiB [Acidovorax sp. KKS102]
 gi|407895456|gb|AFU44665.1| ubiquinone biosynthesis protein UbiB [Acidovorax sp. KKS102]
          Length = 521

 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 189/402 (47%), Gaps = 35/402 (8%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP F+K+GQ  +TR DL P D+  +L+ L  + P         TIERAF R + E
Sbjct: 56  ALESLGPIFVKFGQVLSTRRDLLPPDIADELARLQDRVPPFDPDIAIATIERAFRRPVDE 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  PVAS SIAQVH A+LR R   ++     VAVKV  PG+   I +D  ++ + 
Sbjct: 116 VFTSFDRIPVASASIAQVHFATLRDRQGIER----EVAVKVLRPGMLPVIEKDLSLMRMM 171

Query: 343 AK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  + S+    K L+  E V +F  ++  ++DL REA++ ++   N      V  P+  +
Sbjct: 172 AGWVESLSADGKRLKPREVVAEFDNYLHDELDLVREASNAAQLRRNMAGLDLVLIPEIFW 231

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIH 455
              HP V+V    +G  +S+        ERL+ A      LA  G       +  D F H
Sbjct: 232 DFCHPEVMVMQRMKGVPISQI-------ERLREAGVDIPKLARDGVTIFFTQVFRDGFFH 284

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
           ADMHPGNI V +      +          I LD G+   L++ D+  L + F A  RRD 
Sbjct: 285 ADMHPGNIQVSLEPATFGR---------YISLDFGIVGTLTEVDKEYLAQNFVAFFRRDY 335

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRR 571
           +  AE    L  +     P+  + +++ A      P  D     +     + +L +  RR
Sbjct: 336 KRVAE----LHIESGWVPPETRVNDLESAIRAVCEPYFDRPLKEISLGLVLMRLFQTSRR 391

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             V +   +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 392 FHVEIQPQLVLLQKTLLNIEGLGRELDPDLDLWSTAKPFLEK 433


>gi|301062140|ref|ZP_07202833.1| ABC1 family protein [delta proteobacterium NaphS2]
 gi|300443760|gb|EFK07832.1| ABC1 family protein [delta proteobacterium NaphS2]
          Length = 558

 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 188/408 (46%), Gaps = 27/408 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           +E  GP FIK GQ  +TRPDL P +  ++LS+L    P  S+   +  I    G    E+
Sbjct: 66  VEELGPTFIKLGQILSTRPDLVPLEYAEELSKLQDHVPAFSYDEVRTIITEELGGTPEEL 125

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           F GFE  P+A+ SI QVHRA L     G +     V VKV+ PG+ E +  D  ++++LA
Sbjct: 126 FAGFETEPLAAASIGQVHRARL---ADGDE-----VVVKVQRPGIQEIVEVDLEILLHLA 177

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           + +   +  ++  R    V++FA  +  ++D   EA H  RF   F     +  PK    
Sbjct: 178 SLMERHVEEMEVQRPTRIVEEFARSLEKEIDYTIEAYHTERFSRQFLGNHTIYVPKVYRG 237

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
           L    VL   Y  G  VS  +D L+        LA  G + ++K + V  F HAD HPGN
Sbjct: 238 LNSSRVLTIEYVAGTKVSN-IDILKREGCDLKFLAENGANLVMKQIFVHGFFHADPHPGN 296

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I +                  + FLD GM   + K +R    +F  ++A R+ R   E  
Sbjct: 297 IFI-------------LPDNIICFLDFGMMGRIRKDEREEFTDFVTSLATRNERKIMESV 343

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFA--FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
           LRL+  +  P+ +    ++ +      +G  +G L    E  Q+L+E V  H++ +  ++
Sbjct: 344 LRLTHYEEEPDREVLERDLMDLMEEQIYGR-QGKL-EMGELFQKLIETVSTHKLGIKPDL 401

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYTIDGLM 628
             +M     +EG    LDP +N++  ++  + K    +     I G M
Sbjct: 402 YLMMKALGTIEGVANMLDPDFNILKQVEPFVRKIQEERMSPKRIAGDM 449


>gi|219129977|ref|XP_002185152.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403331|gb|EEC43284.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 528

 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 198/421 (47%), Gaps = 41/421 (9%)

Query: 216 WLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           +L + L  +E +G A IK  QWA +RPDLF  + C   S+L      H +A+T+  ++ A
Sbjct: 93  YLQMCLTCVEWSGAAVIKLMQWAGSRPDLFGHEFCVVFSQLQDHTTPHRWAHTEAKLQEA 152

Query: 276 FGR------RLSEIFDGFEEAPVASGSIAQVHRA---SLRFRYPGQKVKPIVVAVKVRHP 326
           FG+      RL ++        + SG I QV+     S      G   +   VAVKV HP
Sbjct: 153 FGKDWQNKIRLGDV--------IGSGCIGQVYHGQVLSTDNDGGGALGQMRDVAVKVLHP 204

Query: 327 GVGESIRRDFVIINLAAKISSVIP-----AVKWLRLDESVQQFAVFMMSQVDLAREAAHL 381
            V   I  D  ++ LA +    +P      +KWL ++  V +FA  +  Q+DL +EAA+L
Sbjct: 205 NVQSDIEADLDLMRLAVRAVKYVPFDVFANLKWLNMEGVVDEFAHLLQLQLDLRQEAANL 264

Query: 382 SRFIYNFRRWKDVSFPKPVYPLV-HPAVLVETYEQGECVSRYVDELQGHERLKSALAHIG 440
            RF  NF+    V FPK V   V    VLVE++  G  V ++  E Q +  L  A+   G
Sbjct: 265 ERFNANFKDVPQVEFPKLVEGYVPTKNVLVESFCVGVPVLKFARENQHNHNLMRAICQTG 324

Query: 441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDR 500
             A+ KM+ +DNF+H D+HPGN+ +    KK            +I  DVG+ AE S+ D 
Sbjct: 325 IRAVCKMIFLDNFMHGDLHPGNVYISQDGKK------------IILFDVGIVAEYSEEDH 372

Query: 501 VNLVEFFKAVARRDGRTA-----AECTLRLSKQQN-CPNPKAFIEEVDEAFAFWGTPEGD 554
             +V+   A  R+ GR A     A+   RL    +     + +I++++E        +  
Sbjct: 373 RAIVDVLAAFIRKKGRVAGRRMIADSNNRLRGSGDYAREEERYIDKIEELTIKASGKDYF 432

Query: 555 LVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           + H    +  + +    H V ++ +  +  +   V EG    LDP  N+      ++++A
Sbjct: 433 MEHLGTYISYICDAAAAHHVMMNPSFISAALAVKVQEGIALALDPSINLPKVAIPVIIEA 492

Query: 615 D 615
           +
Sbjct: 493 E 493


>gi|389870884|ref|YP_006378303.1| putative ubiquinone biosynthesis protein UbiB [Advenella
           kashmirensis WT001]
 gi|388536133|gb|AFK61321.1| putative ubiquinone biosynthesis protein UbiB [Advenella
           kashmirensis WT001]
          Length = 500

 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 193/404 (47%), Gaps = 31/404 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP FIK+GQ  +TR DL P D+  +LS L  + P        ++I++AFG+  SE+
Sbjct: 58  LESLGPIFIKFGQVLSTRRDLIPLDIADELSALQDRVPPFPSEQAMESIQKAFGKHPSEL 117

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL-A 342
           F  FE  PVAS S+AQVH A L   + G++     VAVKV  PG+   I RD  ++NL A
Sbjct: 118 FALFETEPVASASVAQVHFAVL---HDGRE-----VAVKVLRPGMLAVIERDLSLMNLFA 169

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF----RRWKDVSFPK 398
             +  ++P  + LR  E V +F  ++  ++DL  EAA+ S+   NF    +R   +  P+
Sbjct: 170 GFVERLLPDGRRLRPREVVSEFDKYLHDELDLQVEAANCSQLRRNFESNPKRADLLIVPE 229

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
            ++      V+      G  VS+ +D+L+        LA  G       +  D F HADM
Sbjct: 230 VIWEFTSKTVMTMERMHGVPVSQ-IDKLEAAGVDIKKLARNGVEIFFTQVFEDGFFHADM 288

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI V +  +   +          I LD G+   LS+ D+  L + F A  RRD R  
Sbjct: 289 HPGNIFVSLQPETLGR---------YIALDFGIVGSLSEFDKNYLSQNFLAFFRRDYRRV 339

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRV 574
           A+    L  +          EE++ A      P  D     +   + + +L +  RR  V
Sbjct: 340 AQ----LHIESGWVPATTREEELEAAVRSVCEPYFDRKLSEISLGQVLLRLFQTSRRFNV 395

Query: 575 NVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAK 618
            +   +  +  T L +EG  R+LDP  ++  T +  L +  W +
Sbjct: 396 EIQPQLVLLQKTLLNVEGMGRQLDPDLDLWQTAKPFLERWMWDR 439


>gi|120612286|ref|YP_971964.1| putative ubiquinone biosynthesis protein UbiB [Acidovorax citrulli
           AAC00-1]
 gi|226713014|sp|A1TTA2.1|UBIB_ACIAC RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|120590750|gb|ABM34190.1| 2-octaprenylphenol hydroxylase [Acidovorax citrulli AAC00-1]
          Length = 522

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/402 (32%), Positives = 191/402 (47%), Gaps = 35/402 (8%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P         TIERAF R + E
Sbjct: 56  ALERLGPIFVKFGQVLSTRRDLLPPDIANELALLQDRVPPFDPDVAVATIERAFRRPVGE 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
           +F  FE  PVAS SIAQVH A +R R+  ++     VAVKV  PG+   I  D  ++  +
Sbjct: 116 VFVSFERVPVASASIAQVHFAIVRDRHGVER----EVAVKVLRPGMLPVIDNDLGLMRAM 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  + S+    K L+  + V +F  ++  ++DL REAA+ ++   N  R   V  P+ ++
Sbjct: 172 AGWVESLSADGKRLKPRQVVAEFDNYLHDELDLIREAANAAQLRRNMERLGLVRIPEILW 231

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIH 455
              HP VLV    +G  +S+        ERL++A      LA  G       +  D F H
Sbjct: 232 DFCHPEVLVMERMKGVPISQI-------ERLRAAGVDIRQLARDGVTIFFTQVFRDGFFH 284

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
           ADMHPGNI  +V+ +  S  R        I LD G+   L++ D+  L + F A  RRD 
Sbjct: 285 ADMHPGNI--QVSLEPGSFGR-------YISLDFGIVGSLTEFDKEYLAQNFTAFFRRDY 335

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRR 571
           +  AE    L  +         I E++ A      P  D     +     + +L +  RR
Sbjct: 336 KRVAE----LHVESGWVPADTRINELESAIRAVCEPYFDRPLKEISLGMVLMRLFQTSRR 391

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             V +   +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 392 FHVEIQPQLVLLQKTLLNIEGLGRQLDPELDLWSTAKPFLEK 433


>gi|296136652|ref|YP_003643894.1| 2-polyprenylphenol 6-hydroxylase [Thiomonas intermedia K12]
 gi|295796774|gb|ADG31564.1| 2-polyprenylphenol 6-hydroxylase [Thiomonas intermedia K12]
          Length = 523

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 130/403 (32%), Positives = 191/403 (47%), Gaps = 28/403 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP F+K+GQ  +TR DL P D+  +L++L    P          IER+FGR +  
Sbjct: 56  ALESLGPIFVKFGQVLSTRRDLLPPDIADELAKLQDNVPPFDSEVAVAIIERSFGRPIET 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
           +F  FE  PVAS SIAQVH A+L  +  G +     VAVKV  PG+ + I  D  +++ +
Sbjct: 116 LFATFERKPVASASIAQVHFATLPLQQGGAE-----VAVKVLRPGMHKVIDEDLALMHTM 170

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +  +    K L+  E V +F  ++  ++DL REAA+ ++   N      +  P+  +
Sbjct: 171 AAWVDRLWSEGKRLKPREVVTEFDKYLHDELDLVREAANGTQLRRNMASLDLLLIPEMHW 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
            L    V+V     G  + R VD L+        LA  G       +  D F HADMHPG
Sbjct: 231 ELCRSDVIVMQRMYGVPIGR-VDALRAAGVDFKQLAKAGVDIFFTQVFRDGFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI+V      S Q   F      I LD G+   LS  D+  L + F A  RRD +  AE 
Sbjct: 290 NIMV------SLQPETF---GRYIALDFGIVGTLSDFDKDYLAQNFIAFFRRDYKRVAE- 339

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAF-----WGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
              L  +       A I+E++ A        +  P  D +   + + +L +  RR +V +
Sbjct: 340 ---LHVESGWVPADARIDELEAAVRSVCEPQFARPLKD-ISLGQVLLRLFQVSRRFKVEI 395

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
              +  +  T L +EG  R+LDP  ++  T Q  L K  W KS
Sbjct: 396 QPQLVLLQKTLLNVEGLGRQLDPDLDLWTTAQPFLEK--WMKS 436


>gi|410694357|ref|YP_003624979.1| 2-octaprenylphenol hydroxylase [Thiomonas sp. 3As]
 gi|294340782|emb|CAZ89177.1| 2-octaprenylphenol hydroxylase [Thiomonas sp. 3As]
          Length = 523

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 130/403 (32%), Positives = 191/403 (47%), Gaps = 28/403 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP F+K+GQ  +TR DL P D+  +L++L    P          IER+FGR +  
Sbjct: 56  ALESLGPIFVKFGQVLSTRRDLLPPDIADELAKLQDNVPPFDSEVAVAIIERSFGRPIET 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
           +F  FE  PVAS SIAQVH A+L  +  G +     VAVKV  PG+ + I  D  +++ +
Sbjct: 116 LFATFERKPVASASIAQVHFATLPLQQGGAE-----VAVKVLRPGMHKVIDEDLALMHTM 170

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +  +    K L+  E V +F  ++  ++DL REAA+ ++   N      +  P+  +
Sbjct: 171 AAWVDRLWSEGKRLKPREVVAEFDKYLHDELDLVREAANGTQLRRNMASLDLLLIPEMHW 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
            L    V+V     G  + R VD L+        LA  G       +  D F HADMHPG
Sbjct: 231 ELCRSDVIVMQRMYGVPIGR-VDALRAAGVDFKQLAKAGVDIFFTQVFRDGFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI+V      S Q   F      I LD G+   LS  D+  L + F A  RRD +  AE 
Sbjct: 290 NIMV------SLQPETF---GRYIALDFGIVGTLSDFDKDYLAQNFIAFFRRDYKRVAE- 339

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAF-----WGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
              L  +       A I+E++ A        +  P  D +   + + +L +  RR +V +
Sbjct: 340 ---LHVESGWVPADARIDELEAAVRSVCEPQFARPLKD-ISLGQVLLRLFQVSRRFKVEI 395

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
              +  +  T L +EG  R+LDP  ++  T Q  L K  W KS
Sbjct: 396 QPQLVLLQKTLLNVEGLGRQLDPDLDLWTTAQPFLEK--WMKS 436


>gi|388566396|ref|ZP_10152841.1| 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway
           [Hydrogenophaga sp. PBC]
 gi|388266410|gb|EIK91955.1| 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway
           [Hydrogenophaga sp. PBC]
          Length = 521

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 187/395 (47%), Gaps = 23/395 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P         TIERAFGRR+ ++
Sbjct: 57  LERLGPIFVKFGQVLSTRRDLLPPDIADELARLQDRVPPFPSEIAIATIERAFGRRVDDV 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  FE  PVAS SIAQVH A+LR    G +     VAVKV  P +   I +D  ++ L A
Sbjct: 117 FSHFERVPVASASIAQVHFATLR----GGRDAGREVAVKVLRPNMLPVIEKDLALMRLMA 172

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  +    K L+  E V +F  ++  ++DL REA++ ++   N      V  P+ ++ 
Sbjct: 173 GWVERLSADGKRLKPREVVAEFDKYLHDELDLLREASNAAQLRRNMAGLDLVLIPEMLWD 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                V+V     G  ++R  +EL+        LA  G       +  D F HADMHPGN
Sbjct: 233 WCRNDVMVMERMHGVPINR-TNELRRLGVDIPRLARDGVTIFFTQVFRDGFFHADMHPGN 291

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V VA     +          I LD G+   L++ D+  L + F A  RRD R  AE  
Sbjct: 292 IQVSVAPATFGR---------YISLDFGIVGTLTEHDKEYLAQNFTAFFRRDYRRVAE-- 340

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
             L  +     P+  ++E++ A      P  D     +     + +L +  RR +V +  
Sbjct: 341 --LHIESGWVPPETRVDELESAIRAVCEPYFDRPLKEISLGMVLMRLFQTSRRFQVEIQP 398

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 399 QLVLLQKTLLNIEGLGRELDPELDLWATAKPFLEK 433


>gi|71909480|ref|YP_287067.1| ubiquinone biosynthesis protein UbiB [Dechloromonas aromatica RCB]
 gi|71849101|gb|AAZ48597.1| 2-octaprenylphenol hydroxylase [Dechloromonas aromatica RCB]
          Length = 506

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 185/392 (47%), Gaps = 26/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL P D+  +L+ L  + P    A     IE+A+GR  SE+
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLMPPDIADELARLQDRVPPFDSALALAEIEKAYGRPASEV 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F  F+  P+AS SIAQVH A LR    G +     VAVK+  P +   I  D  ++ NLA
Sbjct: 116 FAEFDATPIASASIAQVHFAKLREEDGGHE-----VAVKILRPNMLSVIEHDLALMDNLA 170

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  +    K L+  E V +FA ++  ++DL REAA+ S+   NF   + +  P+  + 
Sbjct: 171 MLLEKLWSDGKRLKPREVVAEFAKYLRDELDLMREAANASQLRRNFTDSQLLIVPEVHWD 230

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                V+V    +G  +S+ +D+L+      S L+  G       +  D F HADMHPGN
Sbjct: 231 FCTSTVMVMERMKGTPISQ-IDKLRADGIDLSKLSAAGVEIFFTQVFRDGFFHADMHPGN 289

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V                   I LD G+   L+ +D+  L + F A  RRD +  AE  
Sbjct: 290 IFV-------------APDGRYIALDFGIVGTLTDSDKNYLAQNFLAFFRRDYKRVAEAH 336

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +      K       +A I  V E    +  P  D+    + + +L +  RR  V +   
Sbjct: 337 IESGWAPKDTRVDEFEAAIRAVCE--PIFDRPLKDISF-GKILLRLFQTSRRFNVEIQPQ 393

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 394 LVMLQKTLLNIEGLGRQLDPELDLWKTAKPFL 425


>gi|91201863|emb|CAJ74923.1| similar to ubiquinone biosynthesis protein UbiB [Candidatus
           Kuenenia stuttgartiensis]
          Length = 562

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 189/386 (48%), Gaps = 31/386 (8%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + LE  GP FIK+GQ  + RPDL P DLC++LS+L  + P   +   KK I+ +FG+   
Sbjct: 68  KVLEELGPTFIKFGQILSVRPDLIPLDLCEELSKLQDRVPPFPYEDVKKQIKDSFGKLPE 127

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           E+F  F+  P A+ S+ Q H+A L+    G+      V +KV+ P + + I  D  I+N 
Sbjct: 128 ELFSSFDPVPFAAASLGQAHKARLQ---TGEN-----VVIKVQRPNLNKIITTDIDILNT 179

Query: 342 AAKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
            A+++   +  ++ L     V +F+  +  ++D   EA ++ +F  NF+  K +  PK  
Sbjct: 180 LAQLADWYMQDIRILNPITIVDEFSKVITKEIDFTYEAHNMDKFRKNFKDNKTIHIPKVY 239

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGH-ERLKSALAHIGTHALLKMLLVDNFIHADMH 459
           +    P V+      G  ++ Y+  LQ H    K A+A  G +A+L+ + +D F HAD H
Sbjct: 240 WDYTRPMVMTTEEIHGIRLNEYL--LQPHTTEEKKAVAVNGANAVLQQIFIDGFFHADPH 297

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR--- 516
           PGNI V +    S+            F+D G+   L +  R  ++    AV++++     
Sbjct: 298 PGNIFV-LPNNVSA------------FIDFGIVGRLDEETRDAIITLLIAVSKKNIPGII 344

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
            A E    + ++    + K  I E  E   ++  P   +  PA  + Q L+ + RH++ +
Sbjct: 345 KALELLGAIDEENPIRDLKNDISEFLE--RYYDIPLKQIEVPA-MLHQTLDLMTRHKLKI 401

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYN 602
                 +  T   ++G  R+LDP +N
Sbjct: 402 PPQFHLLFKTFATIDGVARQLDPEFN 427


>gi|354559145|ref|ZP_08978397.1| ABC-1 domain-containing protein [Desulfitobacterium metallireducens
           DSM 15288]
 gi|353544315|gb|EHC13770.1| ABC-1 domain-containing protein [Desulfitobacterium metallireducens
           DSM 15288]
          Length = 560

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 183/389 (47%), Gaps = 29/389 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP ++K GQ A+TRPD+ P  L ++L +L  +     +    + IE   G++ +EI
Sbjct: 64  LEELGPTYVKLGQIASTRPDILPDFLIRELEKLQDQVAPFPYDEASQIIESELGKKPTEI 123

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           F+ FEE P+A+ SI QV+RA L+    G+K     VAVKV+ P + ++I  D  ++++LA
Sbjct: 124 FERFEEIPIAAASIGQVYRAVLK---SGEK-----VAVKVQRPQITQTIETDLEILLDLA 175

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
               + +   K  +L E V++FA  + S++D + E  +  +    F+   +V  PK  + 
Sbjct: 176 TIAENRVDWAKHYQLKEMVEEFARSLRSELDYSIEGRNAEKIGSQFKDTPEVHIPKIYWD 235

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTH---ALLKMLLVDNFIHADMH 459
                +L   +  G  +S++ D       L  +L  IG +   A+ K +L+D F H D H
Sbjct: 236 YSTKKILTLEFVHGVKLSQFED----LTALGYSLKTIGENLVKAMFKQILIDGFFHGDPH 291

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGNI +   Q  S              +D GM   LS   + N       + R+  +   
Sbjct: 292 PGNIFILPGQIIS-------------LIDFGMVGRLSSEMKYNFSSLVIGMMRKKTKDMV 338

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +  L +    +  N K    +VD     +       +H  E +  L +   RHR+ +  +
Sbjct: 339 DAVLDMGIAPSDVNMKLLYRDVDNLREKYLDVAMSEIHLGEAVNDLFKVAYRHRIQIPAD 398

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
           +  +  + L LEG   +LDP  +++D  Q
Sbjct: 399 LVLLGKSLLSLEGIVEQLDPEISIIDIAQ 427


>gi|365092358|ref|ZP_09329506.1| putative ubiquinone biosynthesis protein UbiB [Acidovorax sp. NO-1]
 gi|363415482|gb|EHL22609.1| putative ubiquinone biosynthesis protein UbiB [Acidovorax sp. NO-1]
          Length = 521

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 189/402 (47%), Gaps = 35/402 (8%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP F+K+GQ  +TR DL P D+  +L+ L  + P         TIERAF R + E
Sbjct: 56  ALESLGPIFVKFGQVLSTRRDLLPPDIADELARLQDRVPPFDPNIAIATIERAFRRPVDE 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  PVAS SIAQVH A+LR R   ++     VAVKV  PG+   I +D  ++ + 
Sbjct: 116 VFTSFDRVPVASASIAQVHFATLRDRQGLER----EVAVKVLRPGMLPVIEKDLSLMRMM 171

Query: 343 AK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  + S+    K L+  E V +F  ++  ++DL +EAA+ ++   N +    V  P+  +
Sbjct: 172 AGWVESLSADGKRLKPREVVAEFDNYLHDELDLVKEAANAAQLRRNMQGLDLVLIPEIFW 231

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIH 455
              H  V+V     G  +S+        ERL+ A      LA  G       +  D F H
Sbjct: 232 DFCHAEVMVMQRMNGVPISQI-------ERLRDAGVDIPKLARDGVTIFFTQVFRDGFFH 284

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
           ADMHPGNI V +      +          I LD G+   L++ D+  L + F A  RRD 
Sbjct: 285 ADMHPGNIQVSLDPATFGR---------YISLDFGIVGTLTEVDKEYLAQNFVAFFRRDY 335

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRR 571
           +  AE    L  +     P+  + +++ A      P  D     +     + +L +  RR
Sbjct: 336 KRVAE----LHIESGWVPPETRVNDLESAIRAVCEPYFDRPLKEISLGMVLMRLFQTSRR 391

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +V +   +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 392 FQVEIQPQLVLLQKTLLNIEGLGRELDPELDLWSTAKPFLEK 433


>gi|332525585|ref|ZP_08401740.1| putative ubiquinone biosynthesis protein UbiB [Rubrivivax
           benzoatilyticus JA2]
 gi|332109150|gb|EGJ10073.1| putative ubiquinone biosynthesis protein UbiB [Rubrivivax
           benzoatilyticus JA2]
          Length = 518

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 192/401 (47%), Gaps = 39/401 (9%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R  E  GP F+K+GQ  +TR DL P DL  +L++L  + P    A  +  +ERAFGR + 
Sbjct: 55  RAFERLGPIFVKFGQVLSTRRDLLPLDLADELAKLQDRVPPFPPAVARALVERAFGRGID 114

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           +IF  FE  PVAS SIAQVH A+L+    G++     VAVKV  PG+ E I  D  +++ 
Sbjct: 115 DIFSHFETEPVASASIAQVHFATLK---DGRE-----VAVKVLRPGMLEVIDDDLTLLHT 166

Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
            A+ +  +    K LR  E V +F V++  ++DL REA++ ++   N    + +  P+ +
Sbjct: 167 LARWVERLSADGKRLRPREVVAEFDVYLHDELDLVREASNAAQLRRNMDGLELLLVPEMI 226

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFI 454
           +     +V+V     G  +S+        ERL+ A      LA  G       +  D F 
Sbjct: 227 WDYCTSSVIVMERMYGVPISQV-------ERLREAGVDFKKLARDGVTIFFTQVFRDGFF 279

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           HADMHPGNI V +A +   +          I LD G+   L++TD+  L   F A  RRD
Sbjct: 280 HADMHPGNIQVSLASETFGR---------YIALDFGIIGTLTETDKEYLAYNFLAFFRRD 330

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVR 570
            +  AE    L  +         I+ ++ A      P  D     +   + + +L +  R
Sbjct: 331 YKRVAE----LHVESGWVPADTRIDALEGAIRAVCEPHFDRPLKDLSLGQVLMRLFQASR 386

Query: 571 RHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           R  V +   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 387 RFNVEIQPQLVLLQKTLLNIEGLGRQLDPELDLWTTAKPFL 427


>gi|297681695|ref|XP_002818591.1| PREDICTED: uncharacterized aarF domain-containing protein kinase 2
           [Pongo abelii]
          Length = 756

 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/267 (37%), Positives = 141/267 (52%), Gaps = 25/267 (9%)

Query: 295 GSIAQVHRASLRFRYPGQKVKP---IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPA 351
           GS A V RA    + PG + +P   I VAVKV HPG+   +  D +++ + +++  ++P 
Sbjct: 285 GSNAGVSRA----QVPGHQPEPGHLIPVAVKVLHPGLLAQVHMDLLLMKIGSRVLGLLPG 340

Query: 352 VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVE 411
           +KWL L E V++F   M+ Q+DL  EA +L  F  NFR  K V FP P+ P V   VLVE
Sbjct: 341 IKWLSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVE 400

Query: 412 TYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKK 471
           TYE+   VS Y  +      LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A   
Sbjct: 401 TYEESVPVSSY-QQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGADGL 459

Query: 472 SSQKR-----------LFRSKP------HVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           SS +            L  + P       ++ LD G+ AEL   D  N    F AV    
Sbjct: 460 SSSQEAQLQQADICDTLVVAVPSSLCPLRLVLLDAGIVAELQAPDLKNFRAVFMAVVMGQ 519

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEEV 541
           G+  AE  L  ++   C + + F  E+
Sbjct: 520 GQRVAELILHHARASECRDVEGFKTEM 546



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 57/94 (60%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P    LWLH++L+  ET+GP +IK GQWA+TR DLF    C + S+LH +   H + +T+
Sbjct: 124 PSVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWTHTE 183

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           + + +AFG     I       PV SG +AQV++A
Sbjct: 184 RFLRQAFGDDWGSILSFENREPVGSGCVAQVYKA 217


>gi|109068466|ref|XP_001082012.1| PREDICTED: uncharacterized aarF domain-containing protein kinase 2
           isoform 1 [Macaca mulatta]
          Length = 664

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/328 (33%), Positives = 165/328 (50%), Gaps = 38/328 (11%)

Query: 295 GSIAQVHRASLRFRYPGQKVKP---IVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPA 351
           GS A V +A +    PG +++P   I VAVKV HPG+   +  D +++ + +++  ++P 
Sbjct: 285 GSNAGVSQAQV----PGHQLEPGHLIPVAVKVLHPGLLAQVHMDLLLMKIGSRVLGLLPG 340

Query: 352 VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVE 411
           +KWL L E V++F   M+ Q+DL  EA +L  F  NF+  K V FP P+ P V   VLVE
Sbjct: 341 IKWLSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFQNVKAVKFPTPLRPFVTREVLVE 400

Query: 412 TYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKK 471
           TYE+   VS Y  +      LK  +A +G + LLKM+ VDNF+HAD+HPGNILV+ A   
Sbjct: 401 TYEESVPVSSY-QQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGADSL 459

Query: 472 SSQKRLFRSKPHV-----------------IFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           SS +     +  V                 + LD G+ AEL  +D  N    F AV    
Sbjct: 460 SSSREAQLQQADVCDTPVVAVPSSLCPLRLVLLDAGIVAELQASDLRNFRAVFMAVVMGQ 519

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRV 574
           G+  AE  L  ++   C + + F  E+             LV  A      LEK+  H  
Sbjct: 520 GQRVAELILHHARASECRDVEGFKTEM-----------ATLVTQARKNTITLEKL--HVS 566

Query: 575 NVDGNVCTVMVTTLVLEGWQRKLDPGYN 602
           ++  +V  +++T  VL G  R+ +  ++
Sbjct: 567 SLLSSVFKLLMTHKVLRGRSRQAERSWD 594



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 58/94 (61%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P    LWLH++L+  ET+GP +IK GQWA+TR DLF    C + S+LH +   H +A+T+
Sbjct: 124 PSVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWAHTE 183

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA 303
           + + +AFG     I       PV SG +AQV++A
Sbjct: 184 RFLRQAFGEDWGSILSFENREPVGSGCVAQVYKA 217


>gi|393777296|ref|ZP_10365588.1| UbiB protein [Ralstonia sp. PBA]
 gi|392715637|gb|EIZ03219.1| UbiB protein [Ralstonia sp. PBA]
          Length = 524

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 126/395 (31%), Positives = 189/395 (47%), Gaps = 25/395 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+  +L++L  + P    A   + IER+ GR L +
Sbjct: 56  ALERLGPIFVKFGQVLSTRRDLMPADIADELAKLQDRVPPFDSAVAVRIIERSLGRPLMD 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +F+ FE+ PVAS S+AQVH A+LR    G       VAVKV  PG+   I  D  ++ ++
Sbjct: 116 LFETFEQVPVASASVAQVHFATLR----GGPHHGKEVAVKVLRPGMLPVIDSDLALMRDV 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  I  +    K L+  E V +F  ++  ++DL REAA+ S+   NF   + +  P+  +
Sbjct: 172 AGWIEKLWADGKRLKPREVVAEFDKYLHDELDLMREAANASQLRRNFADSELLLVPEVYW 231

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 V V     G  +SR +DEL+        LA  G       +  D F HADMHPG
Sbjct: 232 DWCASEVFVMERMHGIPISR-IDELRRAGVDLHELATAGVTIFFTQVFRDGFFHADMHPG 290

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV VA +   +          I LD G+   LS+ D+  L + F A  RRD    A  
Sbjct: 291 NILVSVAPETFGR---------YIALDFGIVGALSEFDKNYLAQNFIAFFRRDYHRVAV- 340

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
              L  +      +  +EE++ A       F+  P  + +     + +L +  RR  V +
Sbjct: 341 ---LHVESGWVPQQTRVEELEGAIRACCEPFFDRPLRE-ISLGIVLMRLFQTSRRFNVEI 396

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 397 QPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAKPYL 431


>gi|239817095|ref|YP_002946005.1| ubiquinone biosynthesis protein UbiB [Variovorax paradoxus S110]
 gi|259550896|sp|C5CWY2.1|UBIB_VARPS RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|239803672|gb|ACS20739.1| 2-polyprenylphenol 6-hydroxylase [Variovorax paradoxus S110]
          Length = 521

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 204/451 (45%), Gaps = 41/451 (9%)

Query: 186 MRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLR------------------TLETA 227
           MR  Y G+      +     +     F++ WL VV R                   LE  
Sbjct: 1   MRRFYRGIFIVWVALRYGLDELVLTSFQKPWLRVVARIVSIGRNLDAPRGQRLREALERL 60

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGF 287
           GP F+K+GQ  +TR DL P D+  +L+ L  + P    A    TIERAF R + ++F  F
Sbjct: 61  GPIFVKFGQVLSTRRDLLPPDIADELAFLQDRVPPFPSAVAIATIERAFRRPVGDVFVQF 120

Query: 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK-IS 346
           +E P+AS SIAQVH A++R      + +   VAVKV  P +   I +D  ++ + A  + 
Sbjct: 121 DETPIASASIAQVHFATIR----TDEGEVREVAVKVLRPSMRGVIEKDLALMAMMAGWVE 176

Query: 347 SVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHP 406
            + P  K L+  E V +F  ++  ++DL REAA+ ++   N    + V  P+  +   HP
Sbjct: 177 KLSPDGKRLKPREVVGEFDKYLHDELDLVREAANAAQLRRNMASLELVLIPEMFWDFCHP 236

Query: 407 AVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVR 466
            V+V     G  +++ +D L+        LA  G       +  D F HADMHPGNI V 
Sbjct: 237 EVIVMERMNGVPIAQ-LDRLRAAGVDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIQVS 295

Query: 467 VAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS 526
           +A +   +          I LD G+   L+++D+  L + F A  RRD +  AE  L   
Sbjct: 296 LAPETFGR---------YISLDFGIIGTLTESDKEYLAQNFVAFFRRDYKRVAELHL--- 343

Query: 527 KQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDGNVCT 582
            +         I+E++ A      P  D     +     + +L +  RR  V +   +  
Sbjct: 344 -ESGWVPEGTRIDELEGAIRTVCEPYFDRPLKEISLGMVLMRLFQTSRRFHVEIQPQLVL 402

Query: 583 VMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 403 LQKTLLNIEGLGRQLDPELDLWHTAKPFLEK 433


>gi|429743996|ref|ZP_19277520.1| 2-polyprenylphenol 6-hydroxylase [Neisseria sp. oral taxon 020 str.
           F0370]
 gi|429164034|gb|EKY06200.1| 2-polyprenylphenol 6-hydroxylase [Neisseria sp. oral taxon 020 str.
           F0370]
          Length = 518

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 187/404 (46%), Gaps = 34/404 (8%)

Query: 217 LHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           L V LR  LE+ GP F+K+GQ  +TRPDL P     +L++L  K P      +++ IE+A
Sbjct: 65  LPVRLRLALESLGPVFVKFGQVLSTRPDLIPHAYAVELAKLQDKVPPFDAELSRRQIEKA 124

Query: 276 FGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD 335
            GR + EI+  FE  PVAS S+AQVHRA L   Y G++     VAVKV  PG+   I +D
Sbjct: 125 LGRPVGEIYAEFETVPVASASVAQVHRARL---YSGEE-----VAVKVLRPGIRSVIEQD 176

Query: 336 FVIINLAAKISSVIPAV-KWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV 394
             ++   A  +  + A  K LR  E V +F  ++  ++DL REAA+ S+   NF+    +
Sbjct: 177 LALLRFCAGWAERLFADGKRLRPREVVDEFDKYLHDELDLMREAANASQLGRNFKDSAML 236

Query: 395 SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFI 454
             PK  Y      VL   +  G  VS  +  L+        LA  G       +  D F 
Sbjct: 237 IVPKVFYDYCAREVLTIEWMDGTPVSD-IAALKAQGIDLHKLADYGVEIFFTQVFRDGFF 295

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           HADMHPGNILV    +              I LD G+   L+  D+  L   F A   RD
Sbjct: 296 HADMHPGNILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRD 342

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKV 569
               A  T  +      P+ +A  EE++ A        +  P   +      + +L E  
Sbjct: 343 YHRVA--TAHIESGWVPPDTRA--EELEAAVRSVCEPIFNKPISQISF-GLVLMRLFEVS 397

Query: 570 RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           RR  V +   +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 398 RRFHVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLSK 441


>gi|121608299|ref|YP_996106.1| putative ubiquinone biosynthesis protein UbiB [Verminephrobacter
           eiseniae EF01-2]
 gi|121552939|gb|ABM57088.1| 2-octaprenylphenol hydroxylase [Verminephrobacter eiseniae EF01-2]
          Length = 521

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 192/400 (48%), Gaps = 31/400 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSK----APEHSFAYTKKTIERAFGR 278
            LE  GP F+K+GQ  +TR DL P D+  +L+ L  +    APE + A    TIERAF R
Sbjct: 56  ALERLGPIFVKFGQVLSTRRDLLPADIADELARLQDRVAPFAPEIAIA----TIERAFHR 111

Query: 279 RLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVI 338
            + ++F  FE  PVAS SIAQVH A+LR R   ++     VAVKV  PG+   I +D  +
Sbjct: 112 PVDQVFGAFERVPVASASIAQVHFATLRDRQGIER----EVAVKVLRPGMLAVIEKDLSL 167

Query: 339 INLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP 397
           + + A  + S+    K L+  + V +F  ++  ++DL REAA+ ++   N +    V  P
Sbjct: 168 MRMMAGWVESLSADGKRLKPRQVVAEFDNYLHDELDLVREAANAAQLRRNMQGLDLVLIP 227

Query: 398 KPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHAD 457
           +  +   HP V+V     G  +S+ ++ L+      S LA  G       +  D F HAD
Sbjct: 228 EVFWDFCHPEVMVMQRMNGVPISQ-IERLRQAGADISKLARDGVTIFFTQVFRDGFFHAD 286

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
           MHPGNI V +      +          I LD G+   L+++D+  L + F A  RRD + 
Sbjct: 287 MHPGNIQVSLEPATFGR---------CISLDFGIVGTLTESDKEYLAQNFVAFFRRDYKR 337

Query: 518 AAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHR 573
            AE    L  +     P+    +++ A      P  D     +     + +L +  RR  
Sbjct: 338 VAE----LHIESGWVPPETRANDLESAIRAVCEPYFDRPLKEISLGMVLMRLFQTSRRFH 393

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           V +   +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 394 VEIQPQLVLLQKTLLNIEGLGRELDPELDLWSTAKPFLEK 433


>gi|302391499|ref|YP_003827319.1| ABC transporter [Acetohalobium arabaticum DSM 5501]
 gi|302203576|gb|ADL12254.1| ABC-1 domain protein [Acetohalobium arabaticum DSM 5501]
          Length = 559

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 179/383 (46%), Gaps = 24/383 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP FIK GQ  +TR DL P++  K+L++L    P  SF    + +E    + + +
Sbjct: 67  VLEELGPTFIKLGQLLSTRQDLIPQEYIKELTKLQDDVPPFSFELVLQQVEEELNQPVDD 126

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
           +F   E+ P+A+ SI QVH+A L+    GQ+     V +KV+ P + + I  D  +I NL
Sbjct: 127 LFANIEKEPLAAASIGQVHKAVLK---NGQQ-----VVIKVQRPEIRDIIETDLDIIFNL 178

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +   +    +L   E   +F   +  ++D   E  +  +F  NF   +++  PK  +
Sbjct: 179 AEILDKRVIGDDFLDPVEIASEFNRIIKKELDYQIEGRNTEKFNRNFADEEEIKVPKIYW 238

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
            L    +LV  Y +G  +SR   E    +  K  +A IG ++ +K +LVD F H D HPG
Sbjct: 239 ELSTKKLLVSEYIEGTKLSRIKSEDIDCDYKK--IAQIGANSFMKQVLVDGFFHGDPHPG 296

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           N+L+   +K             V F+D G+   + K     + + F AV  R+     + 
Sbjct: 297 NVLITPEEK-------------VAFIDFGIVGRIDKDTMEEIADLFLAVINRNIDKMVDK 343

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVC 581
            L+L       N +A   ++ E    +   +   +  +  + Q+L    ++RV +  +  
Sbjct: 344 LLKLGMLTQKINRRALKRDMGELLDEYYGADLKEIDISRIINQMLNLAFKYRVQLPTDFI 403

Query: 582 TVMVTTLVLEGWQRKLDPGYNVM 604
            +    + +EG  R LDP +NV+
Sbjct: 404 LLGKALMTVEGIGRDLDPDFNVL 426


>gi|294669551|ref|ZP_06734618.1| hypothetical protein NEIELOOT_01450 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308464|gb|EFE49707.1| hypothetical protein NEIELOOT_01450 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 503

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 192/404 (47%), Gaps = 34/404 (8%)

Query: 217 LHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           L V LR  LE+ GP F+K+GQ  +TRPDL P D   +L++L  K P      +++ IE+A
Sbjct: 50  LPVRLRLALESLGPVFVKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDADLSRRQIEKA 109

Query: 276 FGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD 335
           FG+ ++E++  FE  PVAS S+AQVH+A L   + G++     VAVKV  P +   I +D
Sbjct: 110 FGKPIAELYAEFETQPVASASVAQVHKARL---HGGER-----VAVKVLRPDILPVIEQD 161

Query: 336 FVIINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV 394
             ++   A  +  +    K LR  E V +F  ++  ++DL REAA+ S+   NF+  + +
Sbjct: 162 LALLRFGAGWVERLFADGKRLRPREVVDEFDKYLHDELDLMREAANCSQLGRNFKDSEML 221

Query: 395 SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFI 454
             PK  Y      VL   +  G  VS  +  L+   +    LA  G       +  D F 
Sbjct: 222 IVPKVFYDYCSRDVLTIEWMDGTPVSD-IAALRAQGQDLHRLAEYGVETFFTQVFRDGFF 280

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           HADMHPGNILV      S+  R        I LD G+   L+  D+  L   F A   RD
Sbjct: 281 HADMHPGNILV------SADNR-------YIALDFGIVGSLTDYDKRYLAINFLAFFNRD 327

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKV 569
               A   +    +     P+   EE++ A        +  P  ++      + +L E  
Sbjct: 328 YHRVATAHI----ESGWVPPETRAEELEAAVRAVCEPVFNKPISEISF-GLVLMRLFEVS 382

Query: 570 RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           RR  V +   +  +  T L +EG  R+L+P  ++  T +  L++
Sbjct: 383 RRFNVEIQPQLVLLQKTLLNIEGLGRQLEPDLDLWATAKPFLVR 426


>gi|225024385|ref|ZP_03713577.1| hypothetical protein EIKCOROL_01260 [Eikenella corrodens ATCC
           23834]
 gi|224942882|gb|EEG24091.1| hypothetical protein EIKCOROL_01260 [Eikenella corrodens ATCC
           23834]
          Length = 500

 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 187/409 (45%), Gaps = 34/409 (8%)

Query: 211 QFRELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           + R+  L V LR  LE+ GP F+K GQ  +TRPDL P     +LS L  K P       +
Sbjct: 41  KMRDTPLPVRLRLALESLGPIFVKLGQVLSTRPDLLPAAYALELSRLQDKVPPFDADLAR 100

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329
           + IE +FGR + EI+  FE  PVA+ S+AQVHRA L   + G+      VAVKV  P + 
Sbjct: 101 QQIEASFGRPVEEIYAEFEAEPVAAASVAQVHRARL---FGGE-----AVAVKVLRPNLE 152

Query: 330 ESIRRDFVIINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
             I +D  ++  AA+ I  ++P  K LR  E V +F  ++  ++DL REAA+ S+   NF
Sbjct: 153 PVIEQDLALMRTAARLIEKLLPDGKRLRPREVVAEFDKYLHDELDLLREAANASQIGRNF 212

Query: 389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML 448
                +  PK  Y     +V+   +  G  ++  V ELQ        LA  G       +
Sbjct: 213 SGSTMLRVPKVYYDYCSESVMTMQWMDGTPIAE-VAELQRRGVDLKRLARYGVEIFFTQV 271

Query: 449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFK 508
               F HADMHPGNILV               +   I LD G+   L+  D+  L   F 
Sbjct: 272 FKHGFFHADMHPGNILV-------------DDEGRYIALDFGIVGSLTDYDKRYLAINFL 318

Query: 509 AVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQ 563
           A   RD    A   +          P    EE++ A       F+  P  ++      + 
Sbjct: 319 AFFNRDYHRVATAHIESGWVPADTRP----EELEAAVRAVCEPFFNKPLAEISF-GLVLM 373

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLL 612
           +L E  RR  V +   +  +  T L +EG  R+LDP  ++ +T +  L+
Sbjct: 374 RLFETSRRFNVQIQPQLVLLQKTLLNIEGLGRQLDPQLDLWETAKPFLV 422


>gi|430807336|ref|ZP_19434451.1| ubiquinone biosynthesis protein UbiB [Cupriavidus sp. HMR-1]
 gi|429500317|gb|EKZ98693.1| ubiquinone biosynthesis protein UbiB [Cupriavidus sp. HMR-1]
          Length = 525

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 186/399 (46%), Gaps = 35/399 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L T GP F+K+GQ  +TR DL P D+  +L++L  + P    A   K IE++ GRRL+E+
Sbjct: 57  LTTLGPIFVKFGQVLSTRRDLMPPDIADELAKLQDQVPPFESAVAVKIIEKSLGRRLTEL 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F+ FE  PVAS SIAQVH A+LR    G       VAVKV  PG+   I  D  ++ ++A
Sbjct: 117 FETFEHEPVASASIAQVHFATLR----GGPSHGREVAVKVLRPGMLPVIDSDLALMRDMA 172

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  V    + L+  E V +F  ++  ++DL  EAA+ S+   NF     +  P+  + 
Sbjct: 173 TWLERVWVDGRRLKPREVVAEFDKYLHDELDLMIEAANASQLRRNFAESDLLCVPEVFWD 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIHA 456
               +V       G  +SR        E LK+A      LA  G       +  D F HA
Sbjct: 233 WCTSSVFTMERMHGIPISRT-------ESLKAAGVDMHKLAEEGVEIFFTQVFRDGFFHA 285

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNILV V  +   +          I LD G+   LS+ D+  L + F A  RRD  
Sbjct: 286 DMHPGNILVSVRPETFGR---------YIALDFGIVGALSEFDKNYLAQNFIAFFRRDYH 336

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRH 572
             A     L  +     P+  +EE++ A      P  D     +     + +L +  RR 
Sbjct: 337 RVA----LLHVESGWVPPETRVEELESAVRACCEPYFDKPLREISLGMVLMRLFQTSRRF 392

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            V +   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 393 NVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFL 431


>gi|121603695|ref|YP_981024.1| putative ubiquinone biosynthesis protein UbiB [Polaromonas
           naphthalenivorans CJ2]
 gi|120592664|gb|ABM36103.1| 2-octaprenylphenol hydroxylase [Polaromonas naphthalenivorans CJ2]
          Length = 517

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 189/402 (47%), Gaps = 41/402 (10%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P    A     IE++FGR L 
Sbjct: 55  QALEHLGPIFVKFGQVLSTRRDLLPPDIADELARLQDRVPPFPSAVAVAIIEKSFGRPLD 114

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
            IF+ FE+ PVAS SIAQVH A+L    PG +     VAVKV  P +  + R+D  ++ +
Sbjct: 115 RIFESFEQTPVASASIAQVHFATL----PGGR----EVAVKVLRPNMVAAFRKDLALMRM 166

Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
            A  +       K L+  E V +F  ++  ++DL REA++ ++   N +    V  P+  
Sbjct: 167 MAGWVERASSDGKRLKPREVVAEFDKYLHDELDLLREASNAAQLRRNMKSLDLVMIPEMY 226

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFI 454
           +    P V+V     G  + +        +RL+ A      L+  G       +  D F 
Sbjct: 227 WEYCMPDVMVMQRMHGVPIGQ-------TQRLRDAGVDMKKLSRDGVTIFFTQVFRDGFF 279

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           HADMHPGN+ V +A +   +          I LD G+   L++ D+  L + F A  +RD
Sbjct: 280 HADMHPGNLQVSLAPETFGR---------YILLDFGIVGTLTEVDKEYLAQNFSAFFQRD 330

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKV 569
            +  AE    L  +     P   ++E++ A        +  P  DL      + +L +  
Sbjct: 331 YKRVAE----LHIESGWVPPATRVDELESAIRACCEPMFDRPLKDL-SLGMVLMRLFQTS 385

Query: 570 RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           RR +V +   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 386 RRFQVEIQPQLVLLQKTLLNIEGLGRELDPDLDLWSTAKPFL 427


>gi|319795428|ref|YP_004157068.1| 2-polyprenylphenol 6-hydroxylase [Variovorax paradoxus EPS]
 gi|315597891|gb|ADU38957.1| 2-polyprenylphenol 6-hydroxylase [Variovorax paradoxus EPS]
          Length = 521

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 197/425 (46%), Gaps = 41/425 (9%)

Query: 212 FRELWLHVVLRT------------------LETAGPAFIKWGQWAATRPDLFPRDLCKKL 253
           F++ WL VV R                   LE  GP F+K+GQ  +TR DL P D+  +L
Sbjct: 27  FQKPWLRVVARVVSIGRNLDAPRGQRLREALERLGPIFVKFGQVLSTRRDLLPPDIADEL 86

Query: 254 SELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQK 313
           + L  + P    A    TIERAF R + ++F  F+E P+AS SIAQVH A++R      +
Sbjct: 87  AFLQDRVPPFPSAVAIATIERAFRRPVGDVFVQFDETPIASASIAQVHFATIRTN--DGE 144

Query: 314 VKPIVVAVKVRHPGVGESIRRDFVIINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQV 372
           ++   VAVKV  P +   I +D  ++ + A  +  + P  K L+  E V +F  ++  ++
Sbjct: 145 IRD--VAVKVLRPSMRGIIEKDLALMAMMAGWVEKLSPDGKRLKPREVVGEFDKYLHDEL 202

Query: 373 DLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERL 432
           DL REAA+ ++   N      V  P+  +   HP V+V     G  +++ +D L+     
Sbjct: 203 DLVREAANAAQLRRNMAELDLVLIPEMFWDFCHPEVIVMERMNGVPIAQ-LDRLRAAGVD 261

Query: 433 KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMT 492
              LA  G       +  D F HADMHPGNI V +A +   +          I LD G+ 
Sbjct: 262 IPKLARDGVTIFFTQVFRDGFFHADMHPGNIQVSLAPETFGR---------YISLDFGII 312

Query: 493 AELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPE 552
             L+++D+  L + F A  RRD +  AE  L    +         I+E++ A      P 
Sbjct: 313 GTLTESDKEYLAQNFVAFFRRDYKRVAELHL----ESGWVPEGTRIDELEAAIRTVCEPY 368

Query: 553 GDL----VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
            D     +     + +L +  RR  V +   +  +  T L +EG  R+LDP  ++  T +
Sbjct: 369 FDRPLKEISLGMVLMRLFQTSRRFHVEIQPQLVLLQKTLLNIEGLGRQLDPELDLWHTAK 428

Query: 609 TLLLK 613
             L K
Sbjct: 429 PFLEK 433


>gi|326318353|ref|YP_004236025.1| 2-polyprenylphenol 6-hydroxylase [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323375189|gb|ADX47458.1| 2-polyprenylphenol 6-hydroxylase [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 522

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 190/402 (47%), Gaps = 35/402 (8%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P         TIERAF R + E
Sbjct: 56  ALERLGPIFVKFGQVLSTRRDLLPPDIANELALLQDRVPPFDPDVAVATIERAFRRPVGE 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
           +F  FE  PVAS SIAQVH A +R R+  ++     VAVKV  PG+   I  D  ++  +
Sbjct: 116 VFVSFERVPVASASIAQVHFAVVRDRHGVER----EVAVKVLRPGMLPVIDNDLGLMRAM 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  + S+    K L+  + V +F  ++  ++DL REAA+ ++   N      V  P+ ++
Sbjct: 172 AGWVESLSADGKRLKPRQVVAEFDNYLHDELDLIREAANAAQLRRNMEGLGLVRIPEILW 231

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIH 455
              HP VLV    +G  +S+        ERL++A      LA  G       +  D F H
Sbjct: 232 DFCHPEVLVMERMKGVPISQI-------ERLRAAGVDIRQLARDGVTIFFTQVFRDGFFH 284

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
           ADMHPGNI  +V+ +  S  R        I LD G+   L++ D+  L + F A  RRD 
Sbjct: 285 ADMHPGNI--QVSLEPGSFGR-------YISLDFGIVGSLTEFDKEYLAQNFTAFFRRDY 335

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRR 571
           +  AE    L  +         I E++ A      P  D     +     + +L +  RR
Sbjct: 336 KRVAE----LHVESGWVPADTRINELESAIRAVCEPYFDRPLKEISLGMVLMRLFQTSRR 391

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             V +   +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 392 FHVEIQPQLVLLQKTLLNIEGLGRQLDPELDLWSTAKPFLEK 433


>gi|148681654|gb|EDL13601.1| aarF domain containing kinase 2, isoform CRA_b [Mus musculus]
          Length = 304

 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 153/301 (50%), Gaps = 24/301 (7%)

Query: 335 DFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV 394
           D +++ + +K   ++P VKWL L E V++F   M+ Q DL  EA +L  F +NF+    V
Sbjct: 2   DLLLMKIGSKALGLLPGVKWLSLPEIVEEFEKLMVQQTDLRYEAQNLEHFQHNFQDMASV 61

Query: 395 SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFI 454
            FP P+ PL+   +LVETYE+   VS Y  +      LK  +A +G + LLKM+ VDNF+
Sbjct: 62  KFPTPLRPLITRDILVETYEESVPVSSY-QQAGIPTDLKRKIAQLGINMLLKMIFVDNFV 120

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPHV-----------------IFLDVGMTAELSK 497
           H D+HPGNILV+ A   S    + + + +V                 + LD G+ A+L  
Sbjct: 121 HGDLHPGNILVQGADGVSPSLEMQQQQVNVCDTLVATIAPALCPLRLVLLDAGIVAKLQA 180

Query: 498 TDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEE----VDEAFAFWGTPEG 553
           +D  N    F+AV    G   AE  L  ++   C + + F  E    V +A     T E 
Sbjct: 181 SDLRNFRAVFQAVVMGQGHRVAELMLHHAQANECKDVERFKAEMATLVTQARKNIVTLEK 240

Query: 554 DLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +H +  +  + + +  H+V ++ N  +++V  +VLEG  R LDP  ++++  +  L K
Sbjct: 241 --LHVSSLLSSVFKLLMTHKVKLESNFASIVVAIMVLEGLGRSLDPTLDILEAAKPFLFK 298

Query: 614 A 614
            
Sbjct: 299 G 299


>gi|226940744|ref|YP_002795818.1| ubiquinone biosynthesis protein [Laribacter hongkongensis HLHK9]
 gi|226715671|gb|ACO74809.1| Probable ubiquinone biosynthesis protein [Laribacter hongkongensis
           HLHK9]
          Length = 561

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 185/394 (46%), Gaps = 34/394 (8%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP FIK+GQ  ATR D+FP +   +  +L ++ P          +  A G  
Sbjct: 64  VRRALEDLGPTFIKFGQIMATRVDVFPPEWIAEFEKLQTRVPPIPAGQLSAVLTAALGVP 123

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +  +   F+  P+ + SIAQVHRA L        +   +VA+K+R PG+ + I  D  I+
Sbjct: 124 VESVCTEFDAHPIGAASIAQVHRARL--------LDGTLVAIKLRRPGIVDKIDADLRIL 175

Query: 340 -NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
            +LA  I    P  +  +  E V QFA  +  +++LA EA ++ RF  +F   + +  P+
Sbjct: 176 GHLARMIEIEFPDARRYQPSEMVVQFAKALRRELNLAAEARNMERFAQHFAGDEHIVVPR 235

Query: 399 PVYPLVHPAVLVETYEQG-ECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHAD 457
             + L +  V V+ + +G         +  G +R    LA  G  A+LKM+L+D F HAD
Sbjct: 236 VSWELTNTGVNVQDFVEGIPATDLAAVDAAGLDR--KLLAQRGADAVLKMILIDGFFHAD 293

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGN+              F     ++F+D GM   LS+  R  L +   A++RRD R 
Sbjct: 294 PHPGNV-------------FFLPDNRIVFIDFGMVGRLSRDRRDELADLLAALSRRDERG 340

Query: 518 AAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKV----RRHR 573
             +  +  +      + +   +  +  F +      DL   A  + QL+  +    R H 
Sbjct: 341 VYDVLIEWTGNAQVDDERLKADIAEFMFQYE-----DLSLSALDLTQLINDIMGLMREHS 395

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
           + +  ++  +    + LEG+ R+LDP + +++ L
Sbjct: 396 IVLPADLSMLFKALITLEGFARQLDPDFKLIEHL 429


>gi|222110014|ref|YP_002552278.1| ubiquinone biosynthesis protein ubib [Acidovorax ebreus TPSY]
 gi|254790312|sp|B9ME24.1|UBIB_ACIET RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|221729458|gb|ACM32278.1| 2-polyprenylphenol 6-hydroxylase [Acidovorax ebreus TPSY]
          Length = 521

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 196/430 (45%), Gaps = 51/430 (11%)

Query: 212 FRELWLHVVLRT------------------LETAGPAFIKWGQWAATRPDLFPRDLCKKL 253
           FR+ WL  V R                   LE+ GP F+K+GQ  +TR DL P D+  +L
Sbjct: 27  FRQPWLRAVTRVITFGRKLDAPRGQRLREALESLGPIFVKFGQVLSTRRDLMPPDIADEL 86

Query: 254 SELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQK 313
           + L  + P         TIERAF R + E+F  F+  PVAS SIAQVH A +R R    +
Sbjct: 87  ALLQDRVPPFDPDVAIATIERAFRRPIGEVFVSFDRQPVASASIAQVHFAVIRDRQGHAR 146

Query: 314 VKPIVVAVKVRHPGVGESIRRDFVIINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQV 372
                VAVKV  PG+   I +D  ++ + A  + S+    K L+  E V +F  ++  ++
Sbjct: 147 ----EVAVKVLRPGMLPVIDKDLALMRMMAGWVESLSADGKRLKPREVVAEFDNYLHDEL 202

Query: 373 DLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERL 432
           DL REAA+ ++   N +    V  P+  +   H  VLV    +G  +++        ERL
Sbjct: 203 DLVREAANAAQLRRNMQGLDLVLIPEVFWDFCHAEVLVMERMKGVPINQV-------ERL 255

Query: 433 KSA------LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIF 486
           +SA      LA  G       +  D F HADMHPGNI V +A +   +          I 
Sbjct: 256 RSAGVDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIQVSLAPETFGR---------YIS 306

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR---LSKQQNCPNPKAFIEEVDE 543
           LD G+   L++ D+  L + F A  RRD +  AE  +    +         +A I  V E
Sbjct: 307 LDFGIVGTLTEFDKEYLAQNFTAFFRRDYKRVAELHIESGWVPAHTRVNELEAAIRTVCE 366

Query: 544 AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
            +      E  L      + +L +  RR +V +   +  +  T L +EG  R+LDP  ++
Sbjct: 367 PYFDRPLKEISL---GMVLLRLFQTSRRFQVEIQPQLVLLQKTLLNIEGLGRQLDPDLDL 423

Query: 604 MDTLQTLLLK 613
             T +  L K
Sbjct: 424 WSTAKPFLEK 433


>gi|404379624|ref|ZP_10984679.1| 2-polyprenylphenol 6-hydroxylase [Simonsiella muelleri ATCC 29453]
 gi|294483164|gb|EFG30851.1| 2-polyprenylphenol 6-hydroxylase [Simonsiella muelleri ATCC 29453]
          Length = 503

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 192/412 (46%), Gaps = 34/412 (8%)

Query: 209 GPQFRELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAY 267
            P+ ++  + V LR  LE+ GP F+K GQ  +TRPDL P     +L++L  K P      
Sbjct: 42  SPEAKKQNMPVRLRLALESLGPIFVKLGQVLSTRPDLIPPAYASELAKLQDKVPPFDATL 101

Query: 268 TKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPG 327
           +++ IERA G+ +++++  FE  PVAS SIAQVH+A L   + G       VAVKV  P 
Sbjct: 102 SRQQIERALGKPIAQLYAEFESEPVASASIAQVHKARL---FDG-----TWVAVKVLRPN 153

Query: 328 VGESIRRDFVIINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIY 386
           +GE I +D  ++  AA  I  +    K L+  E V +F  ++  ++DL REAA+ S+   
Sbjct: 154 LGEVIDQDLALMRFAATWIERLFTDGKRLKPREVVAEFDKYLHDELDLMREAANASQLGR 213

Query: 387 NFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLK 446
            F +   +  PK  + L    V+   +  G  +S  V  L+        LA  G      
Sbjct: 214 QFEKSNQIIVPKVYFDLCSREVMTIEWMDGTPISD-VHALKAQGISLKKLARYGVEIFFT 272

Query: 447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEF 506
            +  + F HADMHPGNILV                   I LD G+   L+  D+  L   
Sbjct: 273 QVFSNGFFHADMHPGNILV-------------APDGRYIALDFGIVGSLTDYDKRYLAIN 319

Query: 507 FKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAEC 561
           F A   RD    A  T  +      P+ +A  E+++ A        +  P  ++      
Sbjct: 320 FLAFFNRDYHRVA--TAHIESGWVPPDTRA--EDLEAAVRTVCEPIFNKPLSEISF-GLV 374

Query: 562 MQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           + +L E  RR  V +   +  +  T L +EG  R+LDP  ++ DT +  L+K
Sbjct: 375 LMRLFETSRRFNVEIQPQLVLLQKTLLNIEGLGRQLDPELDLWDTAKPFLVK 426


>gi|241766058|ref|ZP_04763974.1| 2-polyprenylphenol 6-hydroxylase [Acidovorax delafieldii 2AN]
 gi|241363939|gb|EER59227.1| 2-polyprenylphenol 6-hydroxylase [Acidovorax delafieldii 2AN]
          Length = 521

 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 187/401 (46%), Gaps = 35/401 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P         TIERAF R L E+
Sbjct: 57  LEQLGPIFVKFGQVLSTRRDLLPADVADELARLQDRVPPFDTEVAVATIERAFRRPLGEV 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-LA 342
           F  F+  PVAS SIAQVH A LR R   ++     VAVKV  PG+   I +D  ++  +A
Sbjct: 117 FVSFDRTPVASASIAQVHFAILRDRTGVER----EVAVKVLRPGMLPVIEKDLGLMRVMA 172

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             + ++    K L+  E V +F  ++  ++DL REAA+ ++   N      V  P+  + 
Sbjct: 173 GWVENLSSDGKRLKPREVVAEFDNYLHDELDLVREAANAAQLRRNMEGLNLVLVPEIFWD 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIHA 456
             H  V+V     G  +S+        ERL+ A      LA  G       +  D F HA
Sbjct: 233 FCHAEVMVMQRMNGVPISQV-------ERLRDAGVDIPKLARDGVTIFFTQVFRDGFFHA 285

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNI V +      +          I LD G+   L+++D+  L + F A  RRD +
Sbjct: 286 DMHPGNIQVSLEPATFGR---------YISLDFGIVGTLTESDKEYLAQNFVAFFRRDYK 336

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRH 572
             AE    L  +     P+  + +++ A      P  D     +     + +L +  RR 
Sbjct: 337 RVAE----LHIESGWVPPETRVNDLESAIRTVCEPYFDRPLKEISLGMVLMRLFQTSRRF 392

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +V +   +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 393 QVEIQPQLVLLQKTLLNIEGLGRQLDPELDLWSTAKPFLEK 433


>gi|298241515|ref|ZP_06965322.1| ABC-1 domain protein [Ktedonobacter racemifer DSM 44963]
 gi|297554569|gb|EFH88433.1| ABC-1 domain protein [Ktedonobacter racemifer DSM 44963]
          Length = 446

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 176/389 (45%), Gaps = 27/389 (6%)

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGF 287
           G  FIK GQ  +TR DLFP+++   L++L  +    +F + +      FGR +SE+F  F
Sbjct: 78  GATFIKIGQILSTRHDLFPQEIIAPLAKLQDRVKPFAFRHVQAAFLAEFGRSISEMFAEF 137

Query: 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISS 347
           EE P+AS SIA V+RA L   + GQ      VAVKVR PG+ + + +D  ++   A+  S
Sbjct: 138 EEQPIASASIASVYRARL---HSGQ-----WVAVKVRRPGIVQKVEKDLWLMRFMARGLS 189

Query: 348 VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPA 407
            IPA++ + + E V +    +  Q+DL  EA +   F   F     V FP  +      A
Sbjct: 190 RIPALRLVPVIEMVNELGTSIEQQLDLRIEAHNTRHFREQFAHNPQVLFPVLIEKYCSQA 249

Query: 408 VLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRV 467
           +LV  +  G      +D+L   E         G   L  M+ +D FIH D+HPGN+ +  
Sbjct: 250 ILVMEFIDGLV---RIDQLHWEEAEYQESLITGLRVLYHMIFLDGFIHCDLHPGNLYL-- 304

Query: 468 AQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR--L 525
                      R +  V+ LD G  A++  TDR    EFF  +A   G+  A       L
Sbjct: 305 -----------RKRGQVVILDTGFIAKMEPTDRYQFAEFFLGIATNAGKKCAHIIYETAL 353

Query: 526 SKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMV 585
           SK     + + F  EV          + D    A    Q+ +  RR  +    N    ++
Sbjct: 354 SKPATF-DREGFEREVMALIERSTGSKADTFQVAPFAAQIFDIERRFGLRGSINFTMAIL 412

Query: 586 TTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           + LV EG  ++L P  +     +  L +A
Sbjct: 413 SLLVFEGIAKQLYPFLDFQAEAKPFLFQA 441


>gi|359461663|ref|ZP_09250226.1| hypothetical protein ACCM5_23262 [Acaryochloris sp. CCMEE 5410]
          Length = 549

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 182/402 (45%), Gaps = 31/402 (7%)

Query: 220 VLRT-LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGR 278
           VLR  L   GP ++K GQ  +TRPD+ P      LS L SK P  ++   K  I++   +
Sbjct: 46  VLRNILVDLGPVYVKLGQLLSTRPDILPAPYIDALSTLQSKVPPVAWPEIKAVIQQQIAQ 105

Query: 279 RLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVI 338
            L   F   +  PVASGSIAQVHRA L     GQ+     VA+KV+ PG+   + +D  +
Sbjct: 106 ELRSQFKEIDPTPVASGSIAQVHRAIL---ANGQQ-----VAIKVQRPGIDVIVNQDIAL 157

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF--RRWKD--- 393
           IN  A ++S     K   L     +FA  ++ ++D   EA+H  +   N    RW D   
Sbjct: 158 INTLADLASRTDIGKDYDLKSLAAEFANALLDELDFTVEASHTEQLRQNLSTSRWFDPQQ 217

Query: 394 VSFPKPVYPLVHPAVLVETYEQGE-CVSRYVDELQGHERLKSALAHIGT---HALLKMLL 449
           +  PK    L    VLV  +  GE  +S  +   Q   R+ SA   + T    A L+ + 
Sbjct: 218 LVVPKINLALTTQKVLVMQWLDGEPLLSANLPFSQQEPRIDSARRQVTTLLFRAFLQQIY 277

Query: 450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKA 509
           VD F HAD HPGN+              + +      LD GM   L    +  L E   A
Sbjct: 278 VDGFFHADPHPGNL-------------YYLNDGRAAILDCGMVGRLDPNTQQILTEMLLA 324

Query: 510 VARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKV 569
           +   D +  +  TL+L+K +   N      + +     +       ++  E + ++L+  
Sbjct: 325 IVDLDAQRCSRLTLQLAKTRRAENLAQLESDFEALLRKYYNRNLAEINLGEVLYEVLQVA 384

Query: 570 RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           R +++ + GNV   +     LEG  R  DP +NV+D ++ L+
Sbjct: 385 RTNKLKLPGNVGLYVKALANLEGAARTFDPKFNVLDEIKPLM 426


>gi|121593292|ref|YP_985188.1| putative ubiquinone biosynthesis protein UbiB [Acidovorax sp. JS42]
 gi|226713015|sp|A1W4D7.1|UBIB_ACISJ RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|120605372|gb|ABM41112.1| 2-octaprenylphenol hydroxylase [Acidovorax sp. JS42]
          Length = 521

 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 194/424 (45%), Gaps = 39/424 (9%)

Query: 212 FRELWLHVVLRT------------------LETAGPAFIKWGQWAATRPDLFPRDLCKKL 253
           FR+ WL  V R                   LE+ GP F+K+GQ  +TR DL P D+  +L
Sbjct: 27  FRQPWLRAVTRVITFGRKLDAPRGQRLREALESLGPIFVKFGQVLSTRRDLMPPDIADEL 86

Query: 254 SELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQK 313
           + L  + P         TIERAF R + E+F  F+  PVAS SIAQVH A +R R    +
Sbjct: 87  ALLQDRVPPFDPDVAIATIERAFRRPIGEVFVSFDRQPVASASIAQVHFAVIRDRQGHAR 146

Query: 314 VKPIVVAVKVRHPGVGESIRRDFVIINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQV 372
                VAVKV  PG+   I +D  ++ + A  + S+    K L+  E V +F  ++  ++
Sbjct: 147 ----EVAVKVLRPGMLPVIDKDLALMRMMAGWVESLSADGKRLKPREVVAEFDNYLHDEL 202

Query: 373 DLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERL 432
           DL REAA+ ++   N +    V  P+  +   H  VLV    +G  +++ VD L+     
Sbjct: 203 DLVREAANAAQLRRNMQGLDLVLIPEVFWDFCHAEVLVMERMKGVPINQ-VDRLRSAGVD 261

Query: 433 KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMT 492
              LA  G       +  D F HADMHPGNI V +A +   +          I LD G+ 
Sbjct: 262 IPKLARDGVTIFFTQVFRDGFFHADMHPGNIQVSLAPETFGR---------YISLDFGIV 312

Query: 493 AELSKTDRVNLVEFFKAVARRDGRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWG 549
             L++ D+  L + F A  RRD +  AE  +    +         +A I  V E +    
Sbjct: 313 GTLTEFDKEYLAQNFTAFFRRDYKRVAELHIESGWVPAHTRVNELEAAIRTVCEPYFDRP 372

Query: 550 TPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQT 609
             E  L      + +L +  RR +V +   +  +  T L +EG  R+LDP  ++  T + 
Sbjct: 373 LKEISL---GMVLLRLFQTSRRFQVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWSTAKP 429

Query: 610 LLLK 613
            L K
Sbjct: 430 FLEK 433


>gi|158334846|ref|YP_001516018.1| hypothetical protein AM1_1683 [Acaryochloris marina MBIC11017]
 gi|158305087|gb|ABW26704.1| ABC-1 domain protein [Acaryochloris marina MBIC11017]
          Length = 549

 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 182/402 (45%), Gaps = 31/402 (7%)

Query: 220 VLRT-LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGR 278
           VLR  L   GP ++K GQ  +TRPD+ P      LS L SK P  ++   K  I++   +
Sbjct: 46  VLRNILVDLGPVYVKLGQLLSTRPDILPAPYIDALSTLQSKVPPVAWPEIKAVIQQQIAQ 105

Query: 279 RLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVI 338
            L   F   +  PVASGSIAQVHRA L     GQ+     VA+KV+ PG+   + +D  +
Sbjct: 106 ELRSQFKEIDPTPVASGSIAQVHRAIL---ANGQQ-----VAIKVQRPGIDVIVNQDIAL 157

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF--RRWKD--- 393
           IN  A ++S     K   L     +FA  ++ ++D   EA+H  +   N    RW D   
Sbjct: 158 INTLADLASRTDIGKDYDLKSLAAEFANALLDELDFTVEASHTEQLRQNLSTSRWFDPQQ 217

Query: 394 VSFPKPVYPLVHPAVLVETYEQGE-CVSRYVDELQGHERLKSALAHIGT---HALLKMLL 449
           +  PK    L    VLV  +  GE  +S  +   Q   R+ SA   + T    A L+ + 
Sbjct: 218 LVVPKINLALTTQKVLVMQWLDGEPLLSANLPFSQQEPRIDSARRQVTTLLFRAFLQQIY 277

Query: 450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKA 509
           VD F HAD HPGN+              + +      LD GM   L    +  L E   A
Sbjct: 278 VDGFFHADPHPGNL-------------YYLNDGRAAILDCGMVGRLDPNTQQILTEMLLA 324

Query: 510 VARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKV 569
           +   D +  +  TL+L+K +   N      + +     +       ++  E + ++L+  
Sbjct: 325 IVDLDAQRCSRLTLQLAKTRRAENLAQLESDFEALLRKYYNRNLAEINLGEVLYEVLQVA 384

Query: 570 RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           R +++ + GNV   +     LEG  R  DP +NV+D ++ L+
Sbjct: 385 RTNKLKLPGNVGLYVKALANLEGAARTFDPKFNVLDEIKPLM 426


>gi|225351293|ref|ZP_03742316.1| hypothetical protein BIFPSEUDO_02885 [Bifidobacterium
           pseudocatenulatum DSM 20438 = JCM 1200]
 gi|225158749|gb|EEG71991.1| hypothetical protein BIFPSEUDO_02885 [Bifidobacterium
           pseudocatenulatum DSM 20438 = JCM 1200]
          Length = 617

 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 197/413 (47%), Gaps = 37/413 (8%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  GP F+K GQ  + R ++ P+  C +LS+L + A    +    + +E  +GR  SEIF
Sbjct: 122 EALGPTFVKVGQILSMRSEILPQSFCDELSKLRADADPMPYGTVLQVLEDEYGRPASEIF 181

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
           D  +  P+ S S+AQVHRA L     G+      VAVKV+ PGV E++ +D  I+   A+
Sbjct: 182 DHIDATPLGSASLAQVHRAKLT---TGED-----VAVKVQRPGVRETMAQDVSIMRTIAR 233

Query: 345 ISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
           I++  + + + + L   V++      S+ D   EA +L+ F     R+K +  PKP   L
Sbjct: 234 IAAKTMRSAQVVDLSGVVEELWDTFESETDFLIEARNLAEFKRFCERYKYMDCPKPYPEL 293

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL---LKMLLVDNFIHADMHP 460
               V+V  Y +G  VS   + ++    LK     IGT  +      +L + F HAD HP
Sbjct: 294 CTEHVVVMDYVEGISVSHPNELIEAGYDLK----EIGTKLVDNYATQVLDEGFFHADPHP 349

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI+VR  Q              ++ LD+GMT  L+   R  L +   AVA +D    A+
Sbjct: 350 GNIMVRGGQ--------------IVLLDLGMTGRLNAKTRSVLKDMIFAVAEQDSPALAD 395

Query: 521 CTLRLS-KQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
             LR +  + +  +  A + ++D     +GT +   +  A  +  L +  +RH + V   
Sbjct: 396 GLLRFAGAEADSEDYPALLADLDVIVKEFGTVDLAELDIAAMLTALTQMAQRHGIEVPST 455

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVM----DTLQTLLLKADWAK--SLSYTIDG 626
           V TV    + LEG   +  P  N++    D +     K D+AK  + S  I+G
Sbjct: 456 VTTVGRALVTLEGLLDEFIPDVNMIQIISDHIAASTSKKDFAKDEAKSLVIEG 508


>gi|160900890|ref|YP_001566472.1| putative ubiquinone biosynthesis protein UbiB [Delftia acidovorans
           SPH-1]
 gi|226695720|sp|A9BP42.1|UBIB_DELAS RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|160366474|gb|ABX38087.1| 2-polyprenylphenol 6-hydroxylase [Delftia acidovorans SPH-1]
          Length = 521

 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 189/401 (47%), Gaps = 35/401 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+ ++L+ L  + P         TIERAF ++L +I
Sbjct: 57  LEELGPIFVKFGQVLSTRSDLMPPDVAEELARLQDRVPPFDSQIAVDTIERAFRKKLDQI 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  FE  PVAS SIAQVH A +  R   Q+     VAVKV  PG+   I +D  ++++ A
Sbjct: 117 FVSFEREPVASASIAQVHFAVISDRNGVQR----DVAVKVLRPGMKTVIDKDLALMHMMA 172

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           + +  +    K L+  + V +F  ++  ++DL REA++ ++   N      V  P+  + 
Sbjct: 173 RWVERLSADGKRLKPRQVVAEFDNYLHDELDLIREASNAAQLRRNMEGLDLVLIPEVYWD 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIHA 456
                V+V     G  +S+        ERL+ A      LA  G       +  D F HA
Sbjct: 233 FCRSDVMVMQRMTGVPISQV-------ERLREAGVDIPKLARDGVTIFFTQVFRDGFFHA 285

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNI+V +  +   +          I LD G+   L++ D+  L + F A  RRD +
Sbjct: 286 DMHPGNIMVSLEPETFGR---------YISLDFGIVGTLTEYDKEYLAQNFTAFFRRDYK 336

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRH 572
             AE    L  +     P   ++E++ A      P  D     +     + +L +  RR 
Sbjct: 337 RVAE----LHIESGWVPPSTRVDELEAAIRAVCEPYFDRPLAEISLGMVLMRLFQTSRRF 392

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +V +   +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 393 QVEIQPQLVLLQKTLLNIEGLGRQLDPNLDLWSTAKPFLEK 433


>gi|154486501|ref|ZP_02027908.1| hypothetical protein BIFADO_00316 [Bifidobacterium adolescentis
           L2-32]
 gi|154084364|gb|EDN83409.1| ABC1 family protein [Bifidobacterium adolescentis L2-32]
          Length = 626

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 195/407 (47%), Gaps = 39/407 (9%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  + R ++ P+  C +LS+L + A    ++   + +E  +GR + EI
Sbjct: 130 LEALGPTFVKVGQILSMRSEILPQSFCDELSKLRADADPMPYSTVLQVLEDEYGRPVDEI 189

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           FD  +  P+ S S+AQVHRA L     G+      VA+KV+ PGV E++ +D  I+   A
Sbjct: 190 FDHIDPTPLGSASLAQVHRAKL---LTGED-----VAIKVQRPGVRETMAQDVSIMRTIA 241

Query: 344 KISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
            I++  + + + + L   V++      S+ D   E  +L+ F     R+K +  PKP   
Sbjct: 242 GIATKTMRSAQVVDLSGVVEELWDTFESETDFLIETRNLAEFKRFCERYKYMDCPKPYPE 301

Query: 403 LVHPAVLVETYEQGECVSRYVDEL--QGHERLKSALAHIGTHAL---LKMLLVDNFIHAD 457
           L    V+V  Y +G  VS + DEL   G++     L  IGT  +      +L + F HAD
Sbjct: 302 LCTEHVVVMDYVEGISVS-HPDELLAAGYD-----LKEIGTKLVDNYATQVLDEGFFHAD 355

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGNI+VR  Q              ++ LD+GMT  L+   R  L +   AVA +D   
Sbjct: 356 PHPGNIMVRGGQ--------------IVLLDLGMTGRLNAKTRSVLKDMIFAVAEQDSPK 401

Query: 518 AAECTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
            A+  LR +  +  P    A + ++D     +GT +   +  A  +  L +  +RH + V
Sbjct: 402 LADGLLRFAGAEADPEDYPALLADLDVIVKEFGTVDLAELDIAAMLTALTQMAQRHGIEV 461

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVM----DTLQTLLLKADWAKS 619
              V TV    + LEG   +  P  N++    D + +   K D+AK 
Sbjct: 462 PSTVTTVGRALVTLEGLLDEFIPDVNMIQIISDHIASSTSKKDFAKD 508


>gi|119025138|ref|YP_908983.1| hypothetical protein BAD_0120 [Bifidobacterium adolescentis ATCC
           15703]
 gi|118764722|dbj|BAF38901.1| hypothetical protein BAD_0120 [Bifidobacterium adolescentis ATCC
           15703]
          Length = 501

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 195/407 (47%), Gaps = 39/407 (9%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  + R ++ P+  C +LS+L + A    ++   + +E  +GR + EI
Sbjct: 5   LEALGPTFVKVGQILSMRSEILPQSFCDELSKLRAGADPMPYSTVLQVLEDEYGRPVDEI 64

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           FD  +  P+ S S+AQVHRA L     G+      VA+KV+ PGV E++ +D  I+   A
Sbjct: 65  FDHIDPTPLGSASLAQVHRAKL---LTGED-----VAIKVQRPGVRETMAQDVSIMRTIA 116

Query: 344 KISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
            I++  + + + + L   V++      S+ D   E  +L+ F     R+K +  PKP   
Sbjct: 117 GIATKTMRSAQVVDLSGVVEELWDTFESETDFLIETRNLAEFKRFCERYKYMDCPKPYPE 176

Query: 403 LVHPAVLVETYEQGECVSRYVDEL--QGHERLKSALAHIGTHAL---LKMLLVDNFIHAD 457
           L    V+V  Y +G  VS + DEL   G++     L  IGT  +      +L + F HAD
Sbjct: 177 LCTEHVVVMDYVEGISVS-HPDELLAAGYD-----LKEIGTKLVDNYATQVLDEGFFHAD 230

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGNI+VR  Q              ++ LD+GMT  L+   R  L +   AVA +D   
Sbjct: 231 PHPGNIMVRGGQ--------------IVLLDLGMTGRLNAKTRSVLKDMIFAVAEQDSPK 276

Query: 518 AAECTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
            A+  LR +  +  P    A + ++D     +GT +   +  A  +  L +  +RH + V
Sbjct: 277 LADGLLRFAGAEADPEDYPALLADLDVIVKEFGTVDLAELDIAAMLTALTQMAQRHGIEV 336

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVM----DTLQTLLLKADWAKS 619
              V TV    + LEG   +  P  N++    D + +   K D+AK 
Sbjct: 337 PSTVTTVGRALVTLEGLLDEFIPDVNMIQIISDHIASSTSKKDFAKD 383


>gi|383756946|ref|YP_005435931.1| 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway
           UbiB [Rubrivivax gelatinosus IL144]
 gi|381377615|dbj|BAL94432.1| 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway
           UbiB [Rubrivivax gelatinosus IL144]
          Length = 518

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 191/400 (47%), Gaps = 37/400 (9%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R  E  GP F+K+GQ  +TR DL P D+  +L++L  + P    A  +  +ERAFGR + 
Sbjct: 55  RAFERLGPIFVKFGQVLSTRRDLLPLDVADELAKLQDRVPPFPPAVARSLVERAFGRSIE 114

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           +IF  FE  PVAS SIAQVH A+L+    G++     VAVKV  PG+ E I  D  +++ 
Sbjct: 115 DIFSHFETEPVASASIAQVHFATLK---NGRE-----VAVKVLRPGMLEVIDDDLTLLHT 166

Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
            A+ +  +    K LR  E V +F V++  ++DL REA++ ++   N      +  P+ +
Sbjct: 167 LARWVERLSADGKRLRPREVVAEFDVYLHDELDLVREASNAAQLRRNMDGLDLLLVPEMI 226

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFI 454
           +     +V+V     G  +S+        ERL+ A      LA  G       +  D F 
Sbjct: 227 WDYCTSSVIVMERMYGVPISQV-------ERLREAGVDFKKLARDGVTIFFTQVFRDGFF 279

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           HADMHPGNI V +A +   +          I LD G+   L++TD+  L   F A  RRD
Sbjct: 280 HADMHPGNIQVSLAPETFGR---------YIALDFGIIGTLTETDKEYLAYNFLAFFRRD 330

Query: 515 GRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRR 571
            +  AE  +    +         +  I  V E    +  P  DL    + + +L +  RR
Sbjct: 331 YKRVAELHVESGWVPANTRVDALEGAIRAVCE--PHFDRPLKDL-SLGQVLMRLFQASRR 387

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             V +   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 388 FNVEIQPQLVLLQKTLLNIEGLGRQLDPELDLWTTAKPFL 427


>gi|333912807|ref|YP_004486539.1| ubiquinone biosynthesis protein ubiB [Delftia sp. Cs1-4]
 gi|333743007|gb|AEF88184.1| ubiquinone biosynthesis protein ubiB [Delftia sp. Cs1-4]
          Length = 521

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 189/401 (47%), Gaps = 35/401 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+ ++L+ L  + P         TIERAF ++L +I
Sbjct: 57  LEELGPIFVKFGQVLSTRSDLMPPDVAEELARLQDRVPPFDSQIAVDTIERAFRKKLDQI 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  FE  PVAS SIAQVH A +  R   Q+     VAVKV  PG+   I +D  ++++ A
Sbjct: 117 FVSFEREPVASASIAQVHFAVISDRNGVQR----DVAVKVLRPGMKTVIDKDLALMHMMA 172

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           + +  +    K L+  + V +F  ++  ++DL REA++ ++   N      V  P+  + 
Sbjct: 173 RWVERLSADGKRLKPRQVVAEFDNYLHDELDLIREASNAAQLRRNMEGLDLVLIPEVYWD 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIHA 456
                V+V     G  +S+        ERL+ A      LA  G       +  D F HA
Sbjct: 233 FCRNDVMVMQRMTGVPISQV-------ERLREAGVDIPKLARDGVTIFFTQVFRDGFFHA 285

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNI+V +  +   +          I LD G+   L++ D+  L + F A  RRD +
Sbjct: 286 DMHPGNIMVSLEPETFGR---------YISLDFGIVGTLTEYDKEYLAQNFTAFFRRDYK 336

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRH 572
             AE    L  +     P   ++E++ A      P  D     +     + +L +  RR 
Sbjct: 337 RVAE----LHIESGWVPPSTRVDELEAAIRAVCEPYFDRPLAEISLGMVLMRLFQTSRRF 392

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +V +   +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 393 QVEIQPQLVLLQKTLLNIEGLGRQLDPNLDLWSTAKPFLEK 433


>gi|349575303|ref|ZP_08887222.1| 2-polyprenylphenol 6-hydroxylase [Neisseria shayeganii 871]
 gi|348013064|gb|EGY51989.1| 2-polyprenylphenol 6-hydroxylase [Neisseria shayeganii 871]
          Length = 499

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/408 (31%), Positives = 190/408 (46%), Gaps = 34/408 (8%)

Query: 213 RELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKT 271
           RE  L V LR  LE+ GP F+K GQ  +TRPDL P +   +L++L  K P      +++ 
Sbjct: 42  RETPLPVRLRLALESLGPIFVKLGQVLSTRPDLLPPEYALELAKLQDKVPPFDADLSRRQ 101

Query: 272 IERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGES 331
           IE++ G+ + E+F  FE  PVAS SIAQVHRA L   + G+      VAVKV  P +   
Sbjct: 102 IEQSLGKPVHELFAAFETEPVASASIAQVHRARL---HSGE-----AVAVKVLRPNLTPV 153

Query: 332 IRRDFVIINLAA-KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRR 390
           I +D  ++ + A  +  ++P  K L+    V +F  ++  ++DL REAA+ S+   NF+ 
Sbjct: 154 IEQDLALMRVGAWLLERLLPDGKRLKPRAVVAEFDKYLHDELDLLREAANASQLGRNFQN 213

Query: 391 WKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLV 450
              +  PK  Y      VL   +  G  ++  +D L+        LA  G       +  
Sbjct: 214 SDMLIVPKVFYDYCSRDVLTMEWMDGTPIAD-IDTLRAKGIDLPTLAVYGVEIFFTQVFR 272

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV 510
             F HADMHPGNILV                   I LD G+   L+  D+  L   F A 
Sbjct: 273 QGFFHADMHPGNILV-------------ADDGRYIALDFGIVGSLTDYDKRYLAINFLAF 319

Query: 511 ARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQL 565
             RD    A  T  +      P+ +A  EE++ A       F+  P  ++      + +L
Sbjct: 320 FNRDYHRVA--TAHIESGWVPPDTRA--EELESAVRAVCEPFFNKPLAEISF-GLVLMRL 374

Query: 566 LEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            E  RR  V +   +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 375 FETSRRFNVEIQPQLVLLQKTLLNIEGLGRQLDPNLDLWATAKPFLMK 422


>gi|329923437|ref|ZP_08278919.1| ABC1 family protein [Paenibacillus sp. HGF5]
 gi|328941329|gb|EGG37623.1| ABC1 family protein [Paenibacillus sp. HGF5]
          Length = 556

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 190/387 (49%), Gaps = 27/387 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE  GPAF+K GQ A+TR DL P  + ++L +L  + P    A  ++ IE+ +G  + 
Sbjct: 59  RVLEDLGPAFVKLGQLASTRSDLLPDHIIQELVKLQERVPPFPSASARELIEQEWGMPID 118

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
           ++   FE+ P+A+ SI QVH   L+    G+     +VA+KV+ PGV   I RD  I+ +
Sbjct: 119 DVLSKFEDKPLAAASIGQVHAGRLK---SGE-----LVAIKVQRPGVARMIGRDLEILRD 170

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           L +        VK  R+D  V +FA  MM+++D + EA +  +        + V  P+  
Sbjct: 171 LISIAERHWEWVKQYRVDRIVDEFARAMMAELDYSHEARNAEKIASRMTEQEFVHIPRIY 230

Query: 401 YPLVHPAVLVETYEQGECVSRYVDEL-QGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
           +      VL+  Y +G  +SR  + + +GH+ LK+   H+ T  +L+ + ++ F HAD H
Sbjct: 231 WDYTSSKVLMMEYAEGLTLSRRQEIVAKGHD-LKAIAEHL-TDGMLQQIFIEGFFHADPH 288

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGN+LVR   K             ++FLD G+   LS+  + +L     A+ RR+     
Sbjct: 289 PGNLLVREDGK-------------LVFLDFGLVGHLSEDMKDHLSGLIIALMRRNSEGMI 335

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAF-AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
               R+    +  +  A   ++D     ++  P    V   + +  L    +RHR+ +  
Sbjct: 336 RAISRMGLIPDDCDMDALRSDMDRLREEYYDVPFAQ-VRIGKALTDLFAVAQRHRIMLPP 394

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMD 605
           ++  +  + L LEG    LDP  +++D
Sbjct: 395 DMTLLGKSLLTLEGVIEMLDPNLSIID 421


>gi|375104656|ref|ZP_09750917.1| 2-polyprenylphenol 6-hydroxylase [Burkholderiales bacterium
           JOSHI_001]
 gi|374665387|gb|EHR70172.1| 2-polyprenylphenol 6-hydroxylase [Burkholderiales bacterium
           JOSHI_001]
          Length = 521

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 187/393 (47%), Gaps = 27/393 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P    A     +ERAF + L+EI
Sbjct: 60  LERLGPIFVKFGQVLSTRRDLLPLDVADELARLQDRVPPFPGAQAVTLVERAFHKPLAEI 119

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F  F+E PVAS SIAQVH A+L     G++     VAVKV  PG+   +  D  ++  LA
Sbjct: 120 FSRFDEQPVASASIAQVHFATL---LDGRE-----VAVKVLRPGMLAVMDNDIALMRTLA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  V    K L+  E V +F  ++  ++DL REAA+ ++   N +    V  P+ ++ 
Sbjct: 172 RWMERVWVDGKRLKPREVVAEFDNYLHDELDLVREAANAAQLRRNMQDLNLVMVPEMLWD 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
           L    VLV     G  +S+ VD L+        LA  G       +  D F HADMHPGN
Sbjct: 232 LCTSGVLVMERMHGMPISQ-VDRLREAGVDIKKLARDGVTIFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V VA     +          I LD G+   L++ D+  L + F A  RRD +  AE  
Sbjct: 291 IQVSVAPATFGR---------YIALDFGIIGTLTEWDKEYLAQNFLAFFRRDYKRVAE-- 339

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
             L  +     P   ++ ++ A      P+ D     +   + + +L +  RR  V +  
Sbjct: 340 --LHVESGWVPPNTRVDALESAIRAVCEPQFDRPLKDISLGQVLLRLFQTSRRFNVEIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 398 QLVLLQKTLLNIEGLGRQLDPDLDLWTTARPFL 430


>gi|372487357|ref|YP_005026922.1| 2-polyprenylphenol 6-hydroxylase [Dechlorosoma suillum PS]
 gi|359353910|gb|AEV25081.1| 2-polyprenylphenol 6-hydroxylase [Dechlorosoma suillum PS]
          Length = 516

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 190/403 (47%), Gaps = 35/403 (8%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P DL ++L++L  + P          +E A+G+ L+E
Sbjct: 59  ALEALGPIFVKFGQVLSTRRDLLPPDLAEELAKLQDQVPPFPSEQAIAQVEAAYGKPLAE 118

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           IF  F+  PVAS S+AQVH A L   + G++     VAVKV  PG+   I  D  +++  
Sbjct: 119 IFAEFDPTPVASASVAQVHFARL---HDGRE-----VAVKVLRPGMKPVIGHDLALMDTL 170

Query: 343 AKISSVIPAV-KWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A ++  + A  K L+  E V +FA  +  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 171 AGLTEKLWADGKRLKPREVVAEFAKHLYDELDLMREAANCSQLRRNFENSPLLLVPEVHW 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P+V+V     G  +S+    LQ       AL+  G       +  D F HADMHPG
Sbjct: 231 DYCTPSVMVMERMHGIPISQ-TQRLQAQGTDLKALSRAGVEIFFTQVFRDGFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V    +              I LD G+ A L+  D+  L + F A  RRD +  AE 
Sbjct: 290 NIFVHADGR-------------YIALDFGIVATLNDNDKNYLAQNFLAFFRRDYKRVAEA 336

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
            +    +         ++E++ A        +  P  D+    + + +L +  RR  V +
Sbjct: 337 HI----ESGWAPADTRVDELEAAIRAVCEPIFDRPLKDISF-GKLLLRLFQTSRRFNVEI 391

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
              +  +  T L +EG  R+LDP  ++  T +  L K  W +S
Sbjct: 392 QPQLVMLQKTLLNIEGLGRQLDPDLDLWKTAKPFLEK--WMES 432


>gi|302390076|ref|YP_003825897.1| 2-polyprenylphenol 6-hydroxylase [Thermosediminibacter oceani DSM
           16646]
 gi|302200704|gb|ADL08274.1| 2-polyprenylphenol 6-hydroxylase [Thermosediminibacter oceani DSM
           16646]
          Length = 554

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 177/383 (46%), Gaps = 29/383 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  ATRPD+ P D  +++ +LH + P   F   K+ +ER  G R+ E+
Sbjct: 62  LEELGPTFVKLGQILATRPDVIPPDYIEEIKKLHDRIPGVGFDRIKEQVERELGIRIEEV 121

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  FE  P A+ SIAQVHRA L+    GQ      V VKV+ PG+   I+ D  I+   A
Sbjct: 122 FSSFEPQPFAAASIAQVHRAVLK---SGQS-----VVVKVQRPGIERVIKADLDILQSLA 173

Query: 344 KISSV-IPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           +++   IP  +       V++FA  +  ++D  RE  ++ RF  NF     V  P+  + 
Sbjct: 174 RLAERHIPESRIYDPVGLVEEFAHALQRELDFTREGWNVERFRRNFEGDYSVYVPRVFWE 233

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VL   Y  G  V + +D+++     +  +A  G  A+LK +    F HAD HPGN
Sbjct: 234 FTTRRVLTIEYVSGVRVDQ-LDKIEEMGISRKKIAEKGARAILKQIFAHGFFHADPHPGN 292

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           ILV             R    + F+D GM   + +  R  + +  K V +RD     +  
Sbjct: 293 ILV-------------RPDGRIAFIDFGMMGRIDRYTRYKMADLIKNVVKRDEERIVDIL 339

Query: 523 LRL---SKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           L +    +Q N    +  ++++ E +      E   ++    + ++     R+ + +   
Sbjct: 340 LDIGDAGRQCNIGELQLDVQDMLERYYGRTLKE---INMTGLLNEIFATANRYGIKIPPG 396

Query: 580 VCTVMVTTLVLEGWQRKLDPGYN 602
              +    L ++G  R+L P ++
Sbjct: 397 FALLSKAILTIDGIGRQLYPEFD 419


>gi|149927077|ref|ZP_01915335.1| putative ubiquinone biosynthesis [Limnobacter sp. MED105]
 gi|149824298|gb|EDM83518.1| putative ubiquinone biosynthesis [Limnobacter sp. MED105]
          Length = 531

 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 193/402 (48%), Gaps = 33/402 (8%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE  GP F+K+GQ  +TR DL P D+  +L++L  + P  S    ++ IE + GR++ 
Sbjct: 54  RALEDLGPLFVKFGQLLSTRRDLLPEDVADELAKLQDQVPAFSSEKARELIEASLGRQID 113

Query: 282 EIFDGFEEAPVASGSIAQVHRASLR-FRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN 340
           ++F  F+  PVAS SIAQVH A +R     GQK     VAVKV  PG+ E I +D  ++ 
Sbjct: 114 DMFLDFQNIPVASASIAQVHFAVIREGANEGQK-----VAVKVLRPGMIEVIDKDLALMK 168

Query: 341 LAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKD----VS 395
            AA+ I  +    K L+  E V +F  ++  ++DL REAA+ S+   NF         + 
Sbjct: 169 TAARWIEKISSDGKRLKPREVVAEFNKYLHDELDLMREAANASQLRRNFSPTSGSGHLLR 228

Query: 396 FPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIH 455
            P+  +      V+      G  +S+ ++ L+ +      L+  G       +  D F H
Sbjct: 229 VPEMYWDYCCSTVITMERMHGIPISQ-IERLRENNIDLKKLSREGVEIFFTQVFRDGFFH 287

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
           ADMHPGNI V        Q   F      I LD G+   LS  D+  L + F A  R+D 
Sbjct: 288 ADMHPGNIYV------GDQPEDF---GRYIALDFGIVGTLSDVDKQYLAQNFLAFFRQDY 338

Query: 516 RTAAECTLRLSKQQNCPNPKAF-IEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKV 569
           +  AE  +     Q+   PK   I+E++ A       F+G P  + +   + + +L +  
Sbjct: 339 KRVAELHV-----QSGWVPKGTRIDELESAIRACIEPFFGKPLKE-ISLGQALMRLFQTS 392

Query: 570 RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           RR  V +   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 393 RRFNVEIQPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAKPYL 434


>gi|395008526|ref|ZP_10392173.1| 2-polyprenylphenol 6-hydroxylase [Acidovorax sp. CF316]
 gi|394313441|gb|EJE50457.1| 2-polyprenylphenol 6-hydroxylase [Acidovorax sp. CF316]
          Length = 527

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 185/402 (46%), Gaps = 35/402 (8%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P         TIERAF R + E
Sbjct: 56  ALERLGPIFVKFGQVLSTRRDLLPADIADELALLQDRVPPFHHDIAIATIERAFRRPVDE 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  PVAS SIAQVH A+LR R+   +     VAVKV  PG+   I +D  ++ + 
Sbjct: 116 VFTHFDRVPVASASIAQVHFATLRDRHGIAR----EVAVKVLRPGMLPVIEKDLALMRMM 171

Query: 343 AK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  + S+    K L+  E V +F  ++  ++DL REAA+ ++   N      V  P+  +
Sbjct: 172 AGWVESLSADGKRLKPREVVAEFDNYLHDELDLVREAANAAQLRRNMSGLDLVLIPEIFW 231

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIH 455
              H  V+V     G  +++        ERL+ A      LA  G       +  D F H
Sbjct: 232 DFCHAEVMVMQRMNGVPINQI-------ERLRDAGVDIPKLARDGVTIFFTQVFRDGFFH 284

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
           ADMHPGNI V +      +          I LD G+   L++ D+  L + F A  RRD 
Sbjct: 285 ADMHPGNIQVSLDAATFGR---------YISLDFGIVGTLTEFDKEYLAQNFTAFFRRDY 335

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRR 571
           +  AE    L  +     P   + +++ A      P  D     +     + +L +  RR
Sbjct: 336 KRVAE----LHIESGWVPPDTRVNDLESAIRTVCEPYFDRPLKEISLGMVLMRLFQTSRR 391

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             V +   +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 392 FHVEIQPQLVLLQKTLLNIEGLGRQLDPELDLWSTAKPFLEK 433


>gi|94309319|ref|YP_582529.1| putative ubiquinone biosynthesis protein UbiB [Cupriavidus
           metallidurans CH34]
 gi|93353171|gb|ABF07260.1| Probable ubiquinone biosynthesis protein ubiB [Cupriavidus
           metallidurans CH34]
          Length = 525

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 185/399 (46%), Gaps = 35/399 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L   GP F+K+GQ  +TR DL P D+  +L++L  + P    A   K IE++ GRRL+E+
Sbjct: 57  LTALGPIFVKFGQVLSTRRDLMPPDIADELAKLQDQVPPFESAVAVKIIEKSLGRRLTEL 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F+ FE  PVAS SIAQVH A+LR    G       VAVKV  PG+   I  D  ++ ++A
Sbjct: 117 FETFEHEPVASASIAQVHFATLR----GGPSHGREVAVKVLRPGMLPVIDSDLALMRDMA 172

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  V    + L+  E V +F  ++  ++DL  EAA+ S+   NF     +  P+  + 
Sbjct: 173 TWLERVWVDGRRLKPREVVAEFDKYLHDELDLMIEAANASQLRRNFAESDLLCVPEVFWD 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIHA 456
               +V       G  +SR        E LK+A      LA  G       +  D F HA
Sbjct: 233 WCTSSVFTMERMHGIPISRT-------ESLKAAGVDMHKLAEEGVEIFFTQVFRDGFFHA 285

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNILV V  +   +          I LD G+   LS+ D+  L + F A  RRD  
Sbjct: 286 DMHPGNILVSVRPETFGR---------YIALDFGIVGALSEFDKNYLAQNFIAFFRRDYH 336

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRH 572
             A     L  +     P+  +EE++ A      P  D     +     + +L +  RR 
Sbjct: 337 RVA----LLHVESGWVPPETRVEELESAVRACCEPYFDKPLREISLGMVLMRLFQTSRRF 392

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            V +   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 393 NVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFL 431


>gi|337280777|ref|YP_004620249.1| 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway
           [Ramlibacter tataouinensis TTB310]
 gi|334731854|gb|AEG94230.1| candidate 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic
           pathway [Ramlibacter tataouinensis TTB310]
          Length = 522

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 185/393 (47%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P          +ERAF R +  +
Sbjct: 57  LECLGPIFVKFGQVLSTRRDLLPPDIADELARLQDRVPPFPSEIAVAIVERAFRRPVDSV 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  FE  PVAS SIAQVH A+L  R  G+  +   VAVKVR PG+   I +D  ++ + A
Sbjct: 117 FASFEREPVASASIAQVHFATLATRQ-GELRQ---VAVKVRRPGMLPIIEKDLALMRMMA 172

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  +    K L+  E V +F  ++  ++DL REAA+ ++   N      V  P+  + 
Sbjct: 173 GWVERLSADGKRLKPREVVAEFDKYLHDELDLVREAANAAQLRRNMAGLDLVLIPEMYWD 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
             HP V+V     G  +++    ++   +L   LA  G       +  D F HADMHPGN
Sbjct: 233 FCHPEVIVMERMDGVPINQTARLVEAGVQLPQ-LARDGVTIFFTQVFRDGFFHADMHPGN 291

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +A +   +          I LD G+   L++ D+  L + F A  RRD +  AE  
Sbjct: 292 IQVSLAPQTFGR---------YISLDFGIIGTLTEFDKEYLAQNFTAFFRRDYKRVAE-- 340

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
             L  +     P   ++E++ A      P  D     +     + +L +  RR  V +  
Sbjct: 341 --LHIESGWVPPGTRVDELEGAVRTVCEPYFDRPLREISLGMVLMRLFQTSRRFNVEIQP 398

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 399 QLVLLQKTLLNIEGLGRQLDPDLDLWATARPFL 431


>gi|212717065|ref|ZP_03325193.1| hypothetical protein BIFCAT_02012 [Bifidobacterium catenulatum DSM
           16992 = JCM 1194]
 gi|212660053|gb|EEB20628.1| hypothetical protein BIFCAT_02012 [Bifidobacterium catenulatum DSM
           16992 = JCM 1194]
          Length = 569

 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 196/407 (48%), Gaps = 39/407 (9%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  + R ++ P+  C +LS+L + A    +    + +E  +GR + EI
Sbjct: 73  LEALGPTFVKVGQILSMRSEILPQSFCDELSKLRADADPMPYGTVLQVLEDEYGRPVDEI 132

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F+  +  P+ S S+AQVHRA L     G+      VAVKV+ PGV E++ +D  I+   A
Sbjct: 133 FEHIDATPLGSASLAQVHRAKLS---TGED-----VAVKVQRPGVRETMAQDVSIMRTIA 184

Query: 344 KISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           +I++  + + + + L   V++      S+ D   EA +L+ F     R+K +  PKP   
Sbjct: 185 RIAAKTMRSAQVVDLSGVVEELWDTFESETDFLIEARNLAEFKRFCERYKYMDCPKPYPE 244

Query: 403 LVHPAVLVETYEQGECVSRYVDEL--QGHERLKSALAHIGTHAL---LKMLLVDNFIHAD 457
           L    V++  Y +G  VS + DEL   G++     L  IGT  +      +L + F HAD
Sbjct: 245 LCTEHVVIMDYVEGISVS-HPDELIEAGYD-----LKEIGTKLVDNYATQVLDEGFFHAD 298

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGNI+VR  Q              ++ LD+GMT  L+   R  L +   AVA +D   
Sbjct: 299 PHPGNIMVRGGQ--------------IVLLDLGMTGRLNAKTRSVLKDMIFAVAEQDSPA 344

Query: 518 AAECTLRLS-KQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
            A+  LR +  + +  +  A + ++D     +GT +   +  A  +  L +  +RH + V
Sbjct: 345 LADGLLRFAGAEADFEDYPALLADLDVIVKEFGTVDLAELDIAAMLTALTQMAQRHGIEV 404

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVM----DTLQTLLLKADWAKS 619
              V TV    + LEG   +  P  N++    D +     K D+AK 
Sbjct: 405 PSTVTTVGRALVTLEGLLDEFIPDVNMIQIISDHIAASTSKKDFAKG 451


>gi|345875337|ref|ZP_08827131.1| hypothetical protein l11_12150 [Neisseria weaveri LMG 5135]
 gi|417958499|ref|ZP_12601413.1| hypothetical protein l13_18250 [Neisseria weaveri ATCC 51223]
 gi|343966713|gb|EGV34966.1| hypothetical protein l13_18250 [Neisseria weaveri ATCC 51223]
 gi|343969245|gb|EGV37462.1| hypothetical protein l11_12150 [Neisseria weaveri LMG 5135]
          Length = 551

 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 182/394 (46%), Gaps = 29/394 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TRPDL P D  ++L++L  K P      +++ IE+A G+ + E+
Sbjct: 106 LESLGPVFVKFGQVLSTRPDLIPHDYAQELAKLQDKVPPFDAELSRRQIEKALGKPIHEL 165

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           +  F+  PVAS S+AQVH+A L   + G++     VAVKV  P +   I +D  ++   A
Sbjct: 166 YAEFDSEPVASASVAQVHKARL---HSGER-----VAVKVLRPNIAPVIEQDLALLRFGA 217

Query: 344 KISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF+    +  PK  Y 
Sbjct: 218 GWAERLFSDGKRLKPREVVDEFDKYLHDELDLMREAANCSQLGRNFKDSDMLLVPKVFYD 277

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VL   +  G  +S  ++ L+        LA+ G       +  D F HADMHPGN
Sbjct: 278 YCSRDVLTIEWMDGTPISD-IETLKAKNIDLKKLANYGVEIFFTQVFRDGFFHADMHPGN 336

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           ILV    +              I LD G+   L+  D+  L   F A   RD    A   
Sbjct: 337 ILVADDNR-------------YIALDFGIVGSLTDYDKRYLAINFLAFFNRDYHRVATAH 383

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +  +      +A +  V E    +  P   +      + +L E  RR  V +   
Sbjct: 384 IESGWVPAETRAEELEAAVRAVCE--PIFNKPLSQISF-GLVLMRLFETSRRFNVEIQPQ 440

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 441 LVLLQKTLLNIEGLGRQLDPDLDLWATAKPFLTK 474


>gi|20090711|ref|NP_616786.1| hypothetical protein MA1861 [Methanosarcina acetivorans C2A]
 gi|19915764|gb|AAM05266.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 559

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 186/391 (47%), Gaps = 29/391 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE  GP +IK GQ  + R DL P +   + S+L   AP   F   +  I    G  + 
Sbjct: 65  RILEELGPTYIKLGQLLSMRRDLVPLEYAAEFSKLQDDAPSFGFEEVELIIREELGLPVE 124

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
           ++F+ FE+ P+A  SI QVHRA L+    G       V VKV+ PG+ E I  D  I+ +
Sbjct: 125 DLFESFEKKPLACASIGQVHRAKLK---NGDD-----VVVKVQRPGIKEVIESDLDIMYS 176

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           L+  ++  IP  +  R  E V + +  +++++D ++E  +  RF  NF+  + +  PK  
Sbjct: 177 LSRLLTEHIPEARLYRPVELVDELSRSILAEIDYSQEGWNTDRFAENFKDSEQIHIPKVY 236

Query: 401 YPLVHPAVLVETYEQGECVSRYVD--ELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
           +      VL   Y +G    R VD  E QG +R   ALA  G+   LK +  D F HAD+
Sbjct: 237 WDYTGTRVLTLEYIEGIKGGR-VDLLEKQGFDRSAIALAVAGS--FLKQVFEDGFFHADL 293

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNIL+                  V FLD GM   LS   R   +    A+ + D    
Sbjct: 294 HPGNILI-------------MEDGIVAFLDFGMVGHLSSETRDMFLNGMTAMVKGDSSLF 340

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
            E    +    +  + K    + D   + ++G    +L   +  +++L+E +R+++V V 
Sbjct: 341 VEVLRDMGGIDSHVDTKVLKVDFDYFRSKYYGRALKNL-DASVIIEELIEVLRKNQVKVP 399

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
            N+  ++  TL +EG+   +DP  N+ + ++
Sbjct: 400 YNITLLVRGTLAVEGFGLIIDPDLNLAELVE 430


>gi|311065018|ref|YP_003971744.1| ABC1 family protein kinase [Bifidobacterium bifidum PRL2010]
 gi|310867338|gb|ADP36707.1| ABC1 family protein kinase [Bifidobacterium bifidum PRL2010]
          Length = 563

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 190/392 (48%), Gaps = 37/392 (9%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  + R ++ P+  C +L++L + A    +     T+ + +GR + E+
Sbjct: 67  LEALGPTFVKVGQILSMRSEILPQSFCDELAKLRADADPMPYQIVVDTLTQEYGRPIGEV 126

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F   +  P+ S S+AQVHRA+L     G+      VAVKV+ PGV E +  D  I+ ++A
Sbjct: 127 FARIDPTPLGSASLAQVHRATL---VTGED-----VAVKVQRPGVREIMALDVSIMRSIA 178

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
              + ++P+ + + L   V++      S+ D   EA +LS F      ++ +  PKP   
Sbjct: 179 RTATKMLPSAQVVDLGGVVEELWDTFESETDFLVEARNLSEFKRFCEAYRYMDCPKPYMD 238

Query: 403 LVHPAVLVETYEQGECVSRYVDEL--QGHERLKSALAHIGTHAL---LKMLLVDNFIHAD 457
           L    V+V  Y +G  VS + D+L   G++     L  IGT  +      +L D F HAD
Sbjct: 239 LCTEHVVVMDYVEGIAVS-HTDQLIEAGYD-----LKEIGTKLVDNYATQVLDDGFFHAD 292

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGNI++              S   ++ +D+GMT  L+   R  L E   AVA++D   
Sbjct: 293 PHPGNIII--------------SGGQIVLIDLGMTGRLNSQARSVLREMIFAVAKQDSAA 338

Query: 518 AAECTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPE-GDLVHPAECMQQLLEKVRRHRVN 575
            A+  LR +  ++ P    A + ++D     +GT + GDL   A  +  L    +RH + 
Sbjct: 339 LADGLLRFAGTESNPEDYPALLADLDMVVKEFGTVDLGDL-DIAAFLTSLTSLAQRHGIE 397

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
           V G V TV    + LEG   +  P  N++  +
Sbjct: 398 VPGTVTTVGRALVTLEGLLDEFIPDVNMIQII 429


>gi|398811801|ref|ZP_10570588.1| 2-polyprenylphenol 6-hydroxylase [Variovorax sp. CF313]
 gi|398079670|gb|EJL70515.1| 2-polyprenylphenol 6-hydroxylase [Variovorax sp. CF313]
          Length = 524

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 196/425 (46%), Gaps = 41/425 (9%)

Query: 212 FRELWLHVVLRT------------------LETAGPAFIKWGQWAATRPDLFPRDLCKKL 253
           F++ WL VV R                   LE  GP F+K+GQ  +TR DL P D+  +L
Sbjct: 27  FQKPWLRVVARVVSFGRNLDAPRGQRLREALERLGPIFVKFGQVLSTRRDLLPPDIADEL 86

Query: 254 SELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQK 313
           + L  + P    A    TIERAF R + ++F  F+E P+AS SIAQVH A++R      +
Sbjct: 87  AFLQDRVPPFPSAVAIATIERAFRRPVGDVFVQFDETPIASASIAQVHFATIR----TNQ 142

Query: 314 VKPIVVAVKVRHPGVGESIRRDFVIINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQV 372
            +   VAVKV  P +   I +D  ++ + A  I ++    K L+  E V +F  ++  ++
Sbjct: 143 GELREVAVKVLRPNMRGVIEKDLALMAMMAGWIENLSADGKRLKPREVVGEFDKYLHDEL 202

Query: 373 DLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERL 432
           DL REAA+ ++   N      V  P+  +   HP V+V    +G  +++ +D L+     
Sbjct: 203 DLVREAANAAQLRRNMAELDLVLIPEMFWDFCHPEVIVMERMKGVPIAQ-MDRLRAAGVD 261

Query: 433 KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMT 492
              LA  G       +  D F HADMHPGNI V +A +   +          I LD G+ 
Sbjct: 262 IPKLARDGVTIFFTQVFRDGFFHADMHPGNIQVSLAPETFGR---------YISLDFGII 312

Query: 493 AELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPE 552
             L+++D+  L + F A  RRD +  AE  L    +         I+E++ A      P 
Sbjct: 313 GTLTESDKEYLAQNFVAFFRRDYKRVAELHL----ESGWVPVGTRIDELEAAIRTVCEPY 368

Query: 553 GDL----VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
            D     +     + +L +  RR  V +   +  +  T L +EG  R +DP  ++  T +
Sbjct: 369 FDRPLKEISLGMVLMRLFQTSRRFHVEIQPQLVLLQKTLLNIEGLGRNIDPELDLWATAK 428

Query: 609 TLLLK 613
             L K
Sbjct: 429 PFLEK 433


>gi|315643922|ref|ZP_07897092.1| ABC-1 domain protein [Paenibacillus vortex V453]
 gi|315280297|gb|EFU43586.1| ABC-1 domain protein [Paenibacillus vortex V453]
          Length = 556

 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 188/386 (48%), Gaps = 25/386 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE  GPAF+K GQ A+TR DL P  + ++L +L  + P  S A  ++ IE+ +G  + 
Sbjct: 59  RVLEDLGPAFVKLGQLASTRSDLLPDHIIQELVKLQERVPPFSSASARELIEQEWGMPID 118

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
           ++   FEE P+A+ SI QVH   L+    G+      VA+KV+ PGV   I RD  I+ +
Sbjct: 119 DVLSEFEEKPLAAASIGQVHAGRLK---SGEW-----VAIKVQRPGVARMIGRDLEILRD 170

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           L +        VK  R+D  V +FA  MM+++D + EA +  +        + +  P+  
Sbjct: 171 LISIAERHWEWVKLYRVDRIVDEFARAMMAELDYSHEARNAEKVASQMTEHEFIRIPRIY 230

Query: 401 YPLVHPAVLVETYEQGECVSRYVDEL-QGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
           +      VL+  Y +G  +SR  + + +GH+ LK+   H+    +L+ + ++ F HAD H
Sbjct: 231 WEYTSSKVLMMEYAEGLTLSRRQEIVAKGHD-LKAIAEHL-IDGMLQQIFLEGFFHADPH 288

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGN+LVR   K             ++FLD G+  +LS++ R +L     A+ RR+     
Sbjct: 289 PGNLLVREDGK-------------LVFLDFGLVGQLSESMRDHLSGLIIALMRRNSEGMI 335

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
               R+       +  +   ++D     +       V   + +  L    +RH++ +  +
Sbjct: 336 RAISRMGLIPEDCDMDSLRSDMDRLRGEYYDVPFSQVRIGKALTDLFAVAQRHQIMLPPD 395

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMD 605
           +  +  + L LEG    LDP  +++D
Sbjct: 396 LTLLGKSLLTLEGVIEMLDPNLSIID 421


>gi|345864905|ref|ZP_08817100.1| putative ubiquinone biosynthesis protein UbiB [endosymbiont of
           Tevnia jerichonana (vent Tica)]
 gi|345123985|gb|EGW53870.1| putative ubiquinone biosynthesis protein UbiB [endosymbiont of
           Tevnia jerichonana (vent Tica)]
          Length = 552

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 184/399 (46%), Gaps = 35/399 (8%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           + RTLE  GP F+K+GQ  +TR DL P DL  +L++L  + P  S A  ++ IE+AFG  
Sbjct: 58  IRRTLEDLGPIFVKFGQILSTRRDLLPDDLADELAKLQDRVPPFSGAEARRIIEKAFGHP 117

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD---- 335
           + ++ D FEE P+AS SIAQVH A+L+    G++     V VKV  PG+ + IRRD    
Sbjct: 118 IEDVLDAFEEKPLASASIAQVHTATLK---DGRQ-----VVVKVLRPGIEKIIRRDVDLL 169

Query: 336 FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS 395
           F I  LA K        + LR  E ++++   +  ++DL REAA+ S+   NF   +++ 
Sbjct: 170 FTIARLAEKYWK---EGRRLRPVEVIEEYEKTIFDELDLMREAANASQLRRNFLNSEELY 226

Query: 396 FPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIH 455
            P+  + L    VLV     G  V   V+ L+        L   G       +   NF H
Sbjct: 227 VPEIYWDLARQNVLVIERISGTPVGD-VEALRAQGISMQLLGERGVEIFFTQVFKYNFFH 285

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
           ADMHPGNI V                   I +D G+   L++ D+  L E   A   RD 
Sbjct: 286 ADMHPGNIFV-------------EPNGRYIAVDFGIMGTLTEGDKRYLAENLLAFFNRDY 332

Query: 516 RTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRH 572
           +  AE  ++   + K       +A I  V E        E    H    + +L +  RR 
Sbjct: 333 KRVAELHVQSGWVPKTTRVEEFEAAIRTVSEPIFERPLSEISFGH---FLLRLFQTARRF 389

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            + V   +  +  T L +EG  R L P  ++  T +  L
Sbjct: 390 DMEVQPQLVLLQKTLLNIEGLGRMLYPELDLWTTAKPFL 428


>gi|386813535|ref|ZP_10100759.1| ubiquinone biosynthesis protein [planctomycete KSU-1]
 gi|386403032|dbj|GAB63640.1| ubiquinone biosynthesis protein [planctomycete KSU-1]
          Length = 562

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 182/386 (47%), Gaps = 27/386 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + LE  GP FIK+GQ  + RPDL P+D C +LS+L  + P  S+   +K I  +F     
Sbjct: 68  KVLEELGPTFIKFGQILSVRPDLIPQDFCTELSKLQDRIPPFSYGEVRKQIWESFRSYPE 127

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
           E+F  F+  P+A+ S+ Q HRA L+    G+      V VKV+ P + + I  D  I+ N
Sbjct: 128 ELFSSFDSIPLAAASLGQAHRAQLK---TGEN-----VVVKVQRPDIRKMIETDIDILYN 179

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           LA      +  +++      V +F+  +M ++D   EA ++ RF  NF+       PK  
Sbjct: 180 LAQLADRYMQDIRFFDPVSIVDEFSRIIMKEIDFRYEAHNIDRFCKNFKDSTTTYIPKVF 239

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHE--RLKSALAHIGTHALLKMLLVDNFIHADM 458
           +      VL     +G  ++ Y   L GH     K  +A  G +A+L+ + +D F HAD 
Sbjct: 240 WDYTKSKVLTTEEIKGVKLNHY---LCGHRPCEEKKIVAANGANAVLQQVFIDGFFHADP 296

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI +                  + F+D G+   L +  R  +V    A++ ++ +  
Sbjct: 297 HPGNIFI-------------LPNNAIAFVDFGIVGRLDEETRYAIVNLLIAISMKNIQGI 343

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    L    +  + + F  ++++   ++       +  +  + Q ++ + RH++ +  
Sbjct: 344 LKALEMLGSFVDEESARDFKHDINDLIEWYYDIPLKQIEISMVLPQAIDVMTRHKLKIPP 403

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVM 604
            +  ++ T   ++G  R+LDP +N++
Sbjct: 404 QMHILVKTIATMDGIARQLDPEFNII 429


>gi|345879498|ref|ZP_08831139.1| glutamate synthase [NADPH] small chain [endosymbiont of Riftia
           pachyptila (vent Ph05)]
 gi|344223486|gb|EGV49948.1| glutamate synthase [NADPH] small chain [endosymbiont of Riftia
           pachyptila (vent Ph05)]
          Length = 552

 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 184/399 (46%), Gaps = 35/399 (8%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           + RTLE  GP F+K+GQ  +TR DL P DL  +L++L  + P  S A  ++ IE+AFG  
Sbjct: 58  IRRTLEDLGPIFVKFGQILSTRRDLLPDDLADELAKLQDRVPPFSGAEARRIIEKAFGHP 117

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD---- 335
           + ++ D FEE P+AS SIAQVH A+L+    G++     V VKV  PG+ + IRRD    
Sbjct: 118 IEDVLDAFEEKPLASASIAQVHTATLK---DGRQ-----VVVKVLRPGIEKIIRRDVDLL 169

Query: 336 FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS 395
           F I  LA K        + LR  E ++++   +  ++DL REAA+ S+   NF   +++ 
Sbjct: 170 FTIARLAEKYWK---EGRRLRPVEVIEEYEKTIFDELDLMREAANASQLRRNFLNSEELY 226

Query: 396 FPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIH 455
            P+  + L    VLV     G  V   V+ L+        L   G       +   NF H
Sbjct: 227 VPEIYWDLARQNVLVIERISGTPVGD-VEALRAQGISMQLLGERGVEIFFTQVFKYNFFH 285

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
           ADMHPGNI V                   I +D G+   L++ D+  L E   A   RD 
Sbjct: 286 ADMHPGNIFV-------------EPNGRYIAVDFGIMGTLTEGDKRYLAENLLAFFNRDY 332

Query: 516 RTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRH 572
           +  AE  ++   + K       +A I  V E        E    H    + +L +  RR 
Sbjct: 333 KRVAELHVQSGWVPKTTRVEEFEAAIRTVSEPIFERPLSEISFGH---FLLRLFQTARRF 389

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            + V   +  +  T L +EG  R L P  ++  T +  L
Sbjct: 390 DMEVQPQLVLLQKTLLNIEGLGRMLYPELDLWTTAKPFL 428


>gi|329906022|ref|ZP_08274323.1| Ubiquinone biosynthesis monooxygenase UbiB [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327547354|gb|EGF32184.1| Ubiquinone biosynthesis monooxygenase UbiB [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 523

 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 190/396 (47%), Gaps = 29/396 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE  GP F+K+GQ  +TR DL P D+ ++L+ L  + P          I ++ G   S
Sbjct: 56  RALEELGPIFVKFGQVLSTRRDLMPPDIAEELTSLQDRVPPFDSELAIAQITKSLGAHPS 115

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           E+F  F+  PVAS SIAQVH A L+    G++     VAVKV  PG+ +SI  D  ++++
Sbjct: 116 ELFASFDRVPVASASIAQVHFAVLK---DGRE-----VAVKVLRPGMKKSIDEDVALMHV 167

Query: 342 AAKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           AA +   + A  K L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+ +
Sbjct: 168 AAGLVERLWADAKRLKPREVVGEFDKYLHDELDLMREAANGSQLRRNFADSTLLMVPEMM 227

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +     AV+V    +G  +SR +D+L         L+  G       +  D F HADMHP
Sbjct: 228 WDYCSSAVIVMERMKGIPISR-IDQLVAAGVDMKKLSSDGVEIFFTQVFRDGFFHADMHP 286

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNILV +      +          I LD G+   L+  D+  L + F A  RRD +  AE
Sbjct: 287 GNILVSIEPATLGR---------YIALDFGIVGTLNDFDKDYLSQNFLAFFRRDYKRVAE 337

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
             +    +      +  ++E++ A        +  P  D+    + + +L +  RR  V 
Sbjct: 338 AHI----ESGWAPKETRVDELESAVRACCEPIFDRPLKDISF-GQILLRLFQTSRRFNVE 392

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 393 VQPQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPYL 428


>gi|415906738|ref|ZP_11552739.1| Ubiquinone biosynthesis protein [Herbaspirillum frisingense GSF30]
 gi|407763085|gb|EKF71811.1| Ubiquinone biosynthesis protein [Herbaspirillum frisingense GSF30]
          Length = 524

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 189/396 (47%), Gaps = 29/396 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE  GP FIK+GQ  +TR DL P D+  +L+ L  + P        + IE++ G    
Sbjct: 56  RALEDLGPIFIKFGQVLSTRRDLMPPDIANELTLLQDRVPPFESELAVRQIEKSLGAHPD 115

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           ++F  FE  PVAS SIAQVH A+L+    G++     VAVKV  PG+ + I  D  ++++
Sbjct: 116 QLFASFERTPVASASIAQVHFATLK---DGKE-----VAVKVLRPGMRDIIDHDIGLMHV 167

Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           AA  +  +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  
Sbjct: 168 AADWLERLWADGRRLKAKEVVGEFDKYLHDELDLMREAANASQLRRNFAESTLLMVPEMY 227

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +    P+V+V     G  +S+  + L+      S L+  G       +  D F HADMHP
Sbjct: 228 WDYCSPSVIVMERMHGIPISQ-TERLRAEGVDLSKLSRDGVEIFFTQVFRDGFFHADMHP 286

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNILV VA +   +          I LD G+   L+  D+  L + F A  RRD +  AE
Sbjct: 287 GNILVSVAPETFGR---------YIALDFGIVGTLNDFDKDYLSQNFLAFFRRDYKRVAE 337

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
             +    +         ++E++ A        +  P  D+    + + +L +  RR  V 
Sbjct: 338 AHI----ESGWAPKDTRVDELEAAVRACCEPIFDRPLKDISF-GQVLLRLFQTSRRFNVE 392

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 393 VQPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAKPYL 428


>gi|310288146|ref|YP_003939405.1| ubiquinone biosynthesis protein [Bifidobacterium bifidum S17]
 gi|309252083|gb|ADO53831.1| ubiquinone biosynthesis protein [Bifidobacterium bifidum S17]
          Length = 621

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 189/392 (48%), Gaps = 37/392 (9%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  + R ++ P+  C +L++L + A    +     T+ + +GR + E+
Sbjct: 125 LEALGPTFVKVGQILSMRSEILPQSFCDELAKLRADADPMPYQIVVDTLTQEYGRPIGEV 184

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F   +  P+ S S+AQVHRA+L        V    VAVKV+ PGV E +  D  I+ ++A
Sbjct: 185 FARIDPTPLGSASLAQVHRATL--------VTGEDVAVKVQRPGVREIMALDVSIMRSIA 236

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
              + ++P+ + + L   V++      S+ D   EA +LS F      ++ +  PKP   
Sbjct: 237 RAATKMLPSAQVVDLGGVVEELWDTFESETDFLVEARNLSEFKRFCEAYRYMDCPKPYMD 296

Query: 403 LVHPAVLVETYEQGECVSRYVDEL--QGHERLKSALAHIGTHAL---LKMLLVDNFIHAD 457
           L    V+V  Y +G  VS + D+L   G++     L  IGT  +      +L D F HAD
Sbjct: 297 LCTEHVVVMDYVEGIAVS-HTDQLIEAGYD-----LKEIGTKLVDNYATQVLDDGFFHAD 350

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGNI++   Q              ++ +D+GMT  L+   R  L E   AVA++D   
Sbjct: 351 PHPGNIIISGGQ--------------IVLIDLGMTGRLNSQTRSVLREMIFAVAKQDSAA 396

Query: 518 AAECTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPE-GDLVHPAECMQQLLEKVRRHRVN 575
            A+  LR +  ++ P    A + ++D     +GT + GDL   A  +  L    +RH + 
Sbjct: 397 LADGLLRFAGTESNPEDYPALLADLDMVVKEFGTVDLGDL-DIAAFLTSLTSLAQRHGIE 455

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
           V G V TV    + LEG   +  P  N++  +
Sbjct: 456 VPGTVTTVGRALVTLEGLLDEFIPDVNMIQII 487


>gi|313140744|ref|ZP_07802937.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
 gi|313133254|gb|EFR50871.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
          Length = 603

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 188/389 (48%), Gaps = 37/389 (9%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  + R ++ P+  C +L++L + A    +     T+ + +GR + E+
Sbjct: 107 LEALGPTFVKVGQILSMRSEILPQSFCDELAKLRADADPMPYQIVVDTLTQEYGRPIGEV 166

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F   +  P+ S S+AQVHRA+L        V    VAVKV+ PGV E +  D  I+ ++A
Sbjct: 167 FARIDPTPLGSASLAQVHRATL--------VTGEDVAVKVQRPGVREIMALDVSIMRSIA 218

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
              + ++P+ + + L   V++      S+ D   EA +LS F      ++ +  PKP   
Sbjct: 219 RTATKMLPSAQVVDLGGVVEELWDTFESETDFLVEARNLSEFKRFCEAYRYMDCPKPYMD 278

Query: 403 LVHPAVLVETYEQGECVSRYVDEL--QGHERLKSALAHIGTHAL---LKMLLVDNFIHAD 457
           L    V+V  Y +G  VS + D+L   G++     L  IGT  +      +L D F HAD
Sbjct: 279 LCTEHVVVMDYVEGIAVS-HTDQLIEAGYD-----LKEIGTKLVDNYATQVLDDGFFHAD 332

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGNI++   Q              ++ +D+GMT  L+   R  L E   AVA++D   
Sbjct: 333 PHPGNIIISGGQ--------------IVLIDLGMTGRLNSQARSVLREMIFAVAKQDSAA 378

Query: 518 AAECTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPE-GDLVHPAECMQQLLEKVRRHRVN 575
            A+  LR +  ++ P    A + ++D     +GT + GDL   A  +  L    +RH + 
Sbjct: 379 LADGLLRFAGTESNPEDYPALLADLDMVVKEFGTVDLGDL-DIAAFLTSLTSLAQRHGIE 437

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
           V G V TV    + LEG   +  P  N++
Sbjct: 438 VPGTVTTVGRALVTLEGLLDEFIPDVNMI 466


>gi|348617808|ref|ZP_08884343.1| 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway
           [Candidatus Glomeribacter gigasporarum BEG34]
 gi|347816904|emb|CCD28993.1| 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway
           [Candidatus Glomeribacter gigasporarum BEG34]
          Length = 521

 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 185/402 (46%), Gaps = 25/402 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
             E  GP F+K+GQ  +TR DL   D+  +L++L  + P    +     IE A G+ +  
Sbjct: 56  AFEQLGPIFVKFGQMLSTRRDLLAPDIADELAKLQDQVPPFDSSIAIAVIEAALGQPVEA 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
           IF+ FE  P AS SIAQVH A L+      +     VAVKV  PG+  +I RD  ++  L
Sbjct: 116 IFEDFERIPKASASIAQVHFARLKTGADAGR----RVAVKVLRPGMQTAIGRDLALLRPL 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  I       + L+L E V +F   +  ++DL REAA+ S+   NF   K +  P+ ++
Sbjct: 172 ARWIERWWEDGRRLKLREVVAEFDAILHHELDLMREAANASQLRRNFAGSKVLQIPEMIW 231

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
           PL    VLV    +G  +S+  + L         LA  G       +  D F HADMHPG
Sbjct: 232 PLCASNVLVMERMEGIPISQ-TETLHRAGIDLPRLARNGIEIFFTQVFRDGFFHADMHPG 290

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV +    S            I LD G+   LS  D+  L + F A  +RD R  A  
Sbjct: 291 NILVSLNPAHSGA---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYRRVA-- 339

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVD 577
             RL  +     P   IEE++ A      P  +     +   + + +L +  RR +V + 
Sbjct: 340 --RLHVESGWAPPDTRIEELEGAIRAVCEPYFNRALKDISLGQVLLRLFQTSRRFQVEIQ 397

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
             +  +  T L +EG  ++LDP  ++  T Q  L +  W K 
Sbjct: 398 PQLSLLQKTLLNVEGLGKELDPELDLWKTAQPYLER--WVKE 437


>gi|329119675|ref|ZP_08248356.1| 2-polyprenylphenol 6-hydroxylase [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327464272|gb|EGF10576.1| 2-polyprenylphenol 6-hydroxylase [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 503

 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 129/403 (32%), Positives = 187/403 (46%), Gaps = 32/403 (7%)

Query: 217 LHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           L V LR  LE  GP F+K+GQ  +TRPDL       +L++L  K P      +++ IERA
Sbjct: 50  LPVRLRLALEELGPVFVKFGQVLSTRPDLIAPSYAAELAKLQDKVPPFDADLSRRQIERA 109

Query: 276 FGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD 335
            GR +SE++  FE  PVAS S+AQVHRA L   + G++     VAVKV  P +   I +D
Sbjct: 110 LGRPVSELYAEFETVPVASASVAQVHRARL---FSGEE-----VAVKVLRPDIRPVIEQD 161

Query: 336 FVIINLAAKISSVIPAV-KWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV 394
             ++   A  +  + A  K LR  E V +F  ++  ++DL REAA+ S+   NF+    +
Sbjct: 162 LALLRFCAGWAERLFADGKRLRPREVVDEFDKYLHDELDLLREAANCSQLGRNFKDSPML 221

Query: 395 SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFI 454
           + PK  Y      VL   +  G  VS  +  L+        LA  G       +  D F 
Sbjct: 222 TVPKVFYDYCAREVLTIEWMDGTPVSD-IAALKAQGTDLHKLAEYGVEIFFTQVFRDGFF 280

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           HADMHPGNILV    +              I LD G+   L+  D+  L   F A   RD
Sbjct: 281 HADMHPGNILVAPGNR-------------YIALDFGIVGSLTDYDKRYLAINFLAFFNRD 327

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGD----LVHPAECMQQLLEKVR 570
               A  T  +      P+ +A  EE++ A      P  +     +     + +L E  R
Sbjct: 328 YHRVA--TAHIESGWVPPDTRA--EELEAAVRAVCEPVFNKPISQISFGLVLMRLFEVSR 383

Query: 571 RHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           R  V +   +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 384 RFHVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWATAKPFLVK 426


>gi|421735992|ref|ZP_16174852.1| hypothetical protein B217_02965 [Bifidobacterium bifidum IPLA
           20015]
 gi|407296709|gb|EKF16231.1| hypothetical protein B217_02965 [Bifidobacterium bifidum IPLA
           20015]
          Length = 621

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 190/392 (48%), Gaps = 37/392 (9%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  + R ++ P+  C +L++L + A    +     T+ + +GR + E+
Sbjct: 125 LEALGPTFVKVGQILSMRSEILPQSFCDELAKLRADADPMPYQIVVDTLTQEYGRPIGEV 184

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F   +  P+ S S+AQVHRA+L     G+      VAVKV+ PGV E +  D  I+ ++A
Sbjct: 185 FARIDPTPLGSASLAQVHRATL---VTGED-----VAVKVQRPGVREIMALDVSIMRSIA 236

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
              + ++P+ + + L   V++      S+ D   EA +LS F      ++ +  PKP   
Sbjct: 237 RTATKMLPSAQVVDLGGVVEELWDTFESETDFLVEARNLSEFKRFCEAYRYMDCPKPYMD 296

Query: 403 LVHPAVLVETYEQGECVSRYVDEL--QGHERLKSALAHIGTHAL---LKMLLVDNFIHAD 457
           L    V+V  Y +G  VS + D+L   G++     L  IGT  +      +L D F HAD
Sbjct: 297 LCTEHVVVMDYVEGIAVS-HTDQLIEAGYD-----LKEIGTKLVDNYATQVLDDGFFHAD 350

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGNI++   Q              ++ +D+GMT  L+   R  L E   AVA++D   
Sbjct: 351 PHPGNIIISGGQ--------------IVLIDLGMTGRLNSQARSVLREMIFAVAKQDSAA 396

Query: 518 AAECTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPE-GDLVHPAECMQQLLEKVRRHRVN 575
            A+  LR +  ++ P    A + ++D     +GT + GDL   A  +  L    +RH + 
Sbjct: 397 LADGLLRFAGTESNPEDYPALLADLDMVVKEFGTVDLGDL-DIAAFLTSLTSLAQRHGIE 455

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
           V G V TV    + LEG   +  P  N++  +
Sbjct: 456 VPGTVTTVGRALVTLEGLLDEFIPDVNMIQII 487


>gi|381400988|ref|ZP_09925906.1| putative ubiquinone biosynthesis protein UbiB [Kingella kingae
           PYKK081]
 gi|380833913|gb|EIC13763.1| putative ubiquinone biosynthesis protein UbiB [Kingella kingae
           PYKK081]
          Length = 503

 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 184/402 (45%), Gaps = 35/402 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K GQ  +TRPDL P    ++LS+L  K P      +++ IE++ G+ + E+
Sbjct: 58  LESLGPIFVKLGQVLSTRPDLLPAAYAQELSKLQDKVPPFDIDLSRRQIEQSLGKPIHEL 117

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           +  F+  PVAS SIAQVHRA+L   + G+      VAVKV  P + + I +D  ++ L A
Sbjct: 118 YADFDPQPVASASIAQVHRATL---FTGE-----AVAVKVLRPNLTKIIEQDLALMRLGA 169

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             I  +    K L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 170 GCIERLFADGKRLKPREVVAEFDKYLHDELDLLREAANASQLRRNFENSNMLIVPQVYFD 229

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VL   +  G  +S  +D L+        LA  G       +    F HADMHPGN
Sbjct: 230 YCSREVLTIEWMDGTPISD-IDRLREQNIDLHKLATFGVEIFFTQVFKHGFFHADMHPGN 288

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           ILV    +              I LD G+   L+  D+  L   F A   RD    A   
Sbjct: 289 ILVAPDGR-------------YIALDFGIVGSLTDYDKRYLAINFLAFFNRDYHRVATAH 335

Query: 523 LRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
           +    +     P+   E+++ A        +  P  ++      M +L E  RR  V + 
Sbjct: 336 I----ESGWVPPQTRAEDLESAVRAVCEPIFNKPLAEISFGIVLM-RLFETSRRFNVEIQ 390

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
             +  +  T L +EG  R+LDP  ++  T +  L+K  W  S
Sbjct: 391 PQLVLLQKTLLNIEGLGRQLDPNLDLWQTARPFLIK--WMDS 430


>gi|393759009|ref|ZP_10347828.1| putative ubiquinone biosynthesis protein UbiB [Alcaligenes faecalis
           subsp. faecalis NCIB 8687]
 gi|393162905|gb|EJC62960.1| putative ubiquinone biosynthesis protein UbiB [Alcaligenes faecalis
           subsp. faecalis NCIB 8687]
          Length = 518

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 193/401 (48%), Gaps = 35/401 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL P D+ ++L+ L  + P       + TI++A G    ++
Sbjct: 57  LESLGPIFVKFGQVLSTRRDLIPMDIAEQLAMLQDRVPPFPSDVAEATIQKALGASPYDL 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-LA 342
           F  F+  PVAS SIAQVH A+L   + G++     VAVKV  PG+ E I +D  ++  LA
Sbjct: 117 FQEFDRTPVASASIAQVHFATL---HNGRE-----VAVKVLRPGMREVIHKDLRLMRVLA 168

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK-PVY 401
           A +  + P  + L+  E V +F  ++  ++DL REA++ S+   NF   KDV   +  + 
Sbjct: 169 AFMERLGPDARRLKPREVVAEFDKYLNDELDLIREASNCSQLRRNFT--KDVERTQLLIV 226

Query: 402 PLVH-----PAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHA 456
           P VH       V      +G  V++ +D L+        LA  G       +  D F HA
Sbjct: 227 PEVHWDYCASTVFTMDRMKGIPVNQ-IDRLRAANVDLKDLARKGVEIFFTQVFTDGFFHA 285

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNI V  A +   +          I LD G+   LS+ D+  L + F A  RRD R
Sbjct: 286 DMHPGNIYVSDAPETLGR---------YIALDFGIVGSLSEFDKNYLAQNFLAFFRRDYR 336

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRH 572
             A+    L  +     P+   EE++ +      P  D     +   + + +L +  RR 
Sbjct: 337 RVAQ----LHIESGWVPPETREEELEGSVRAVCEPYFDRPLSEISLGQVLLRLFQTSRRF 392

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            V +   +  +  T L +EG  R LDP  ++ DT +  L K
Sbjct: 393 NVEIQPQLVLLQKTLLNVEGMGRDLDPELDLWDTAKPYLEK 433


>gi|409407673|ref|ZP_11256124.1| ubiquinone biosynthesis transmembrane protein [Herbaspirillum sp.
           GW103]
 gi|386433424|gb|EIJ46250.1| ubiquinone biosynthesis transmembrane protein [Herbaspirillum sp.
           GW103]
          Length = 524

 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 188/396 (47%), Gaps = 29/396 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE  GP FIK+GQ  +TR DL P D+  +L+ L  + P        K IE++ G    
Sbjct: 56  RALEDLGPIFIKFGQVLSTRRDLMPPDIANELTLLQDRVPPFDSELAIKQIEKSLGAHPD 115

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           ++F  FE  PVAS SIAQVH A+L+    G+      VAVKV  PG+ + I  D  ++++
Sbjct: 116 QLFASFERTPVASASIAQVHFATLK---DGKH-----VAVKVLRPGMRDIIDHDIGLMHV 167

Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           AA  +  +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  
Sbjct: 168 AADWLERLWADGRRLKAKEVVGEFDKYLHDELDLMREAANASQLRRNFAESTLLMVPEMY 227

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +    P+V+V     G  +S+  + L+      S L+  G       +  D F HADMHP
Sbjct: 228 WDYCSPSVIVMERMVGIPISQ-TERLRAEGVDLSKLSRDGVEIFFTQVFRDGFFHADMHP 286

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNILV VA +         S    I LD G+   L+  D+  L + F A  RRD +  AE
Sbjct: 287 GNILVSVAPE---------SFGRYIALDFGIVGTLNDFDKDYLSQNFLAFFRRDYKRVAE 337

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
             +    +         ++E++ A        +  P  D+    + + +L +  RR  V 
Sbjct: 338 AHI----ESGWAPKDTRVDELEAAVRACCEPIFDRPLKDISF-GQVLLRLFQTSRRFNVE 392

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 393 VQPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAKPYL 428


>gi|456064220|ref|YP_007503190.1| 2-polyprenylphenol 6-hydroxylase [beta proteobacterium CB]
 gi|455441517|gb|AGG34455.1| 2-polyprenylphenol 6-hydroxylase [beta proteobacterium CB]
          Length = 528

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 128/417 (30%), Positives = 200/417 (47%), Gaps = 28/417 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           TLE  GP F+K+GQ  +TR DL P D+  +L++L  + P  S   + + IE+A G+ + E
Sbjct: 57  TLEALGPIFVKFGQVLSTRRDLLPEDIANELAKLQDQVPPFSNDESCRLIEQALGQSIEE 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRF--RYPGQKVKPIVVAVKVRHPGVGESIRRDFVII- 339
           +F  F+  PVAS S+AQVH   LR   ++P  + +P  VAVKV  PG+   I  D  ++ 
Sbjct: 117 VFISFDATPVASASVAQVHFGLLRGTQKHPEWEGRP--VAVKVLRPGILPIIDGDLALLY 174

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
           +LA  I  +    + L+  E+V +F   +  ++DL REAA+ S+    F   K +  P+ 
Sbjct: 175 DLAKIIERLSEDGRRLKPRENVAEFDTHLHDELDLMREAANASQLRRYFVDSKKLMIPEM 234

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
            + L H  V+V     G  + R   ELQ        LA  G       +    F HADMH
Sbjct: 235 YWDLCHTNVIVMEKMDGISIGRTA-ELQAAGIDFKKLAADGVEIFFTQVFQHGFFHADMH 293

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGNI++ +  +   +          I LD G+   LS++D+  L   F A   RD R  A
Sbjct: 294 PGNIMISLEPETFGR---------FISLDFGIVGALSQSDKSYLALNFLAFFNRDYRRVA 344

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVN 575
           E    L  +         +EE++ A      P  D     +     + +L +  RR +V 
Sbjct: 345 E----LHIESGWVPANTRVEELEGAVRSVCEPYFDRPLKEISLGIVLMRLFQTSRRFKVE 400

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADW-AKSLSY--TIDGLMA 629
           +   +  +  T L +EG  R+LDP  ++  T + +L K  W ++ L +   +DG+ A
Sbjct: 401 IQPQLTLLQKTLLNVEGLARQLDPDLDLWKTAKPILEK--WVSQQLGWRALVDGIKA 455


>gi|187251413|ref|YP_001875895.1| putative protein kinase [Elusimicrobium minutum Pei191]
 gi|186971573|gb|ACC98558.1| putative unusual protein kinase [Elusimicrobium minutum Pei191]
          Length = 564

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 197/426 (46%), Gaps = 26/426 (6%)

Query: 185 LMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDL 244
           +MR+L +  +F  +  + P  D+        W ++ +  LE  GP FIK GQ  + RPD+
Sbjct: 30  IMRSLKITDMFPFTKKLLPKVDNKSVSSFNKWENIRM-ALEELGPTFIKLGQMLSNRPDI 88

Query: 245 FPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRAS 304
            P  L K+L +L    P        K +E     ++SE F  F + P+A+ SIAQVH+A 
Sbjct: 89  IPLQLIKELEKLQDTVPPFEHEEAVKIVESELEGKISENFSYFSKKPIAAASIAQVHKA- 147

Query: 305 LRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLAAKISSVIPAVKWLRLDESVQQ 363
              R P        VAVKV+ PG+ E I  D  I+ NLA+   + I  +K+      ++Q
Sbjct: 148 ---RLP----DATTVAVKVQRPGIEEIIGVDVEILHNLASLAGNNITELKYFNPVGIIKQ 200

Query: 364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYV 423
           F   +  ++D  +E  ++ RF  NF++   V   K         VL     +G  VSR  
Sbjct: 201 FEEHIKEELDFNKERLNIERFQRNFQKDGRVHVLKAHKKYSAKRVLTMELIEGVKVSRIA 260

Query: 424 DE-LQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKP 482
           +E L+G++R    +A  G   +LK + +D F HAD HPGNI++    K            
Sbjct: 261 EENLEGYDR--GLIAKNGAQIILKQIFIDGFFHADPHPGNIIILENNK------------ 306

Query: 483 HVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVD 542
            + F+D GM   LS++ + +L     A+  R+        L +  + +    +     V+
Sbjct: 307 -ICFIDFGMMGSLSQSQKDDLGTLIVALMYRNSSLVTSTILTIVNRPDHLQTREIEYRVE 365

Query: 543 EAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYN 602
           +    +     + ++  E +  L + +    +N+  N   ++ + + +EG  R+LDP ++
Sbjct: 366 KLIERYIDLPLEEINVGELLLSLTQMLPEFELNMPPNFSFMVKSLITIEGVGRQLDPEFS 425

Query: 603 VMDTLQ 608
            M  ++
Sbjct: 426 AMAVIK 431


>gi|309802083|ref|ZP_07696193.1| ABC1 family protein [Bifidobacterium dentium JCVIHMP022]
 gi|308221284|gb|EFO77586.1| ABC1 family protein [Bifidobacterium dentium JCVIHMP022]
          Length = 608

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 184/386 (47%), Gaps = 31/386 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  + R ++ P+  C +L++L + A    ++   + +E  +GR + EI
Sbjct: 112 LEALGPTFVKVGQILSMRSEILPQPFCDELAKLRADADPMPYSTVLQVLEDEYGRPVDEI 171

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           FD  +  P+ S S+AQVHRA L     G+      VA+KV+ PGV E++ +D  I+   A
Sbjct: 172 FDHIDATPLGSASLAQVHRAKLT---SGED-----VAIKVQRPGVRETMAQDVSIMRSIA 223

Query: 344 KISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           K+++  + + + + L   V++      S+ D   EA +LS F     R+K +  PKP   
Sbjct: 224 KVATRTMHSAQVVDLSGVVEELWDTFESETDFLVEARNLSEFNRFCERYKYMDCPKPYID 283

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL---LKMLLVDNFIHADMH 459
           L    V+V  Y +G  VS     L+    LK     IGT  +      +L + F HAD H
Sbjct: 284 LCTEHVVVMDYVEGISVSHPDQLLEAGYDLK----EIGTKLVDNYATQVLDEGFFHADPH 339

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGNI+V              S   ++ LD+GMT  L+   R  L +   AVA +D    A
Sbjct: 340 PGNIMV--------------SGGRIVLLDLGMTGRLNAKTRSVLKDMIFAVAEQDSPALA 385

Query: 520 ECTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
           +  LR +  +  P    A + ++D     +GT +   +  A  +  L +  +RH + V  
Sbjct: 386 DGLLRFAGAEADPEDYPALLADLDVIVKEFGTVDLVELDIAAMLTALTQMAQRHGIEVPS 445

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVM 604
            V TV    + LEG   +  P  N++
Sbjct: 446 TVTTVGRALVTLEGLLDEFIPDVNMI 471


>gi|258406093|ref|YP_003198835.1| ABC transporter [Desulfohalobium retbaense DSM 5692]
 gi|257798320|gb|ACV69257.1| ABC-1 domain protein [Desulfohalobium retbaense DSM 5692]
          Length = 547

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 180/385 (46%), Gaps = 24/385 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE  GP F+K+GQ  + R DL P  L ++LS L +      FA  ++ +E  +G  L 
Sbjct: 56  RMLEDLGPTFVKFGQILSLRSDLIPAPLARELSRLQNDVAAGPFAPIRRQLEAEWGVELD 115

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN- 340
           E+F  F   P+A+ S+AQVH+A+L  R  G++     VAVKVR P +  +++RD  I++ 
Sbjct: 116 ELFVDFATTPLAAASLAQVHKATL--RQTGEE-----VAVKVRRPDIENTVQRDLYILDV 168

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           LA ++   +  +++  L   V++    ++ ++D  REA H+     N    +    P   
Sbjct: 169 LARQLHEHVEFLQFYDLPGLVRELKRSLLRELDFRREARHIRIAGANLEHNQYAHIPAVR 228

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
             L    VLV    QG  +S  V  L   ER    LA  G    L+ +L D F HAD HP
Sbjct: 229 ENLTTSKVLVLDLVQGHLLSE-VGTLPDKER--HQLARQGIRVTLQQVLQDGFFHADPHP 285

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI+V             +   H   LD GM   L+   R  L++  + V  RD  +  E
Sbjct: 286 GNIIV-------------QRDGHFTLLDWGMVGRLTPLTRQRLLDMVRGVITRDSSSILE 332

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
             L  ++     +  A   E+ +    + +     +   + + +L   +R+HR+ +  ++
Sbjct: 333 TLLLFARHSELEHKDALEREILDILDIYHSLPLGQIQIGQILMELTGLLRQHRIQITTDL 392

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMD 605
             ++   +  EG  R + P  N+++
Sbjct: 393 AMMVKAMVTAEGSARLICPDLNIIN 417


>gi|421733702|ref|ZP_16172801.1| hypothetical protein B216_02303 [Bifidobacterium bifidum LMG 13195]
 gi|407078363|gb|EKE51170.1| hypothetical protein B216_02303 [Bifidobacterium bifidum LMG 13195]
          Length = 621

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 190/392 (48%), Gaps = 37/392 (9%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  + R ++ P+  C +L++L + A    +     T+ + +GR + E+
Sbjct: 125 LEALGPTFVKVGQILSMRSEILPQSFCDELAKLRADADPMPYQIVVDTLTQEYGRPIGEV 184

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F   +  P+ S S+AQVHRA+L     G+      VAVKV+ PGV E +  D  I+ ++A
Sbjct: 185 FARIDPTPLGSASLAQVHRATL---VTGED-----VAVKVQRPGVREIMALDVSIMRSIA 236

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
              + ++P+ + + L   V++      S+ D   EA +LS F      ++ +  PKP   
Sbjct: 237 RAATKMLPSAQVVDLGGVVEELWDTFESETDFLVEARNLSEFKRFCEAYRYMDCPKPYMD 296

Query: 403 LVHPAVLVETYEQGECVSRYVDEL--QGHERLKSALAHIGTHAL---LKMLLVDNFIHAD 457
           L    V+V  Y +G  VS + D+L   G++     L  IGT  +      +L D F HAD
Sbjct: 297 LCTEHVVVMDYVEGIAVS-HTDQLIEAGYD-----LKEIGTKLVDNYATQVLDDGFFHAD 350

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGNI++   Q              ++ +D+GMT  L+   R  L E   AVA++D   
Sbjct: 351 PHPGNIIISGGQ--------------IVLIDLGMTGRLNSQARSVLREMIFAVAKQDSAA 396

Query: 518 AAECTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPE-GDLVHPAECMQQLLEKVRRHRVN 575
            A+  LR +  ++ P    A + ++D     +GT + GDL   A  +  L    +RH + 
Sbjct: 397 LADGLLRFAGTESDPEDYPALLADLDMVVKEFGTVDLGDL-DIAAFLTSLTSLAQRHGIE 455

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
           V G V TV    + LEG   +  P  N++  +
Sbjct: 456 VPGTVTTVGRALVTLEGLLDEFIPDVNMIQII 487


>gi|83718588|ref|YP_441113.1| ubiquinone biosynthesis protein UbiB [Burkholderia thailandensis
           E264]
 gi|167617938|ref|ZP_02386569.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           thailandensis Bt4]
 gi|257140225|ref|ZP_05588487.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           thailandensis E264]
 gi|83652413|gb|ABC36476.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia thailandensis E264]
          Length = 525

 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 185/395 (46%), Gaps = 23/395 (5%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE+ GP F+K+GQ  +TR DL P D   +L++L  + P    A     +E++ G R+ 
Sbjct: 54  RALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARID 113

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
           E+FD FE  PVAS SIAQVH A L+    G+  K   VAVKV  P +   I  D  ++ +
Sbjct: 114 ELFDEFEREPVASASIAQVHFAKLK---QGEH-KGKAVAVKVLRPNMLPVIDSDLALMRD 169

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           +A     +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  
Sbjct: 170 IATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMF 229

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +    P+VLV     G  +S+ VD L+        LA  G       +  D F HADMHP
Sbjct: 230 WDYSTPSVLVMERMTGVPISQ-VDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHP 288

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V +  K   +          I LD G+   LS  D+  L + F A  +RD    A 
Sbjct: 289 GNIQVSLDPKHFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA- 338

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNV 576
            TL L      P+ +  +EE++ A      P  D     +   + + +L    RR  V +
Sbjct: 339 -TLHLESGWVPPDTR--VEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEI 395

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 396 QPQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|171741530|ref|ZP_02917337.1| hypothetical protein BIFDEN_00615 [Bifidobacterium dentium ATCC
           27678]
 gi|283455138|ref|YP_003359702.1| ABC transporter [Bifidobacterium dentium Bd1]
 gi|171277144|gb|EDT44805.1| ABC1 family protein [Bifidobacterium dentium ATCC 27678]
 gi|283101772|gb|ADB08878.1| ABC1 family protein kinase [Bifidobacterium dentium Bd1]
          Length = 610

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 184/386 (47%), Gaps = 31/386 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  + R ++ P+  C +L++L + A    ++   + +E  +GR + EI
Sbjct: 114 LEALGPTFVKVGQILSMRSEILPQPFCDELAKLRADADPMPYSTVLQVLEDEYGRPVDEI 173

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           FD  +  P+ S S+AQVHRA L     G+      VA+KV+ PGV E++ +D  I+   A
Sbjct: 174 FDHIDATPLGSASLAQVHRAKLT---SGED-----VAIKVQRPGVRETMAQDVSIMRSIA 225

Query: 344 KISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           K+++  + + + + L   V++      S+ D   EA +LS F     R+K +  PKP   
Sbjct: 226 KVATRTMHSAQVVDLSGVVEELWDTFESETDFLVEARNLSEFNRFCERYKYMDCPKPYID 285

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL---LKMLLVDNFIHADMH 459
           L    V+V  Y +G  VS     L+    LK     IGT  +      +L + F HAD H
Sbjct: 286 LCTEHVVVMDYVEGISVSHPDQLLEAGYDLK----EIGTKLVDNYATQVLDEGFFHADPH 341

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGNI+V              S   ++ LD+GMT  L+   R  L +   AVA +D    A
Sbjct: 342 PGNIMV--------------SGGRIVLLDLGMTGRLNAKTRSVLKDMIFAVAEQDSPALA 387

Query: 520 ECTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
           +  LR +  +  P    A + ++D     +GT +   +  A  +  L +  +RH + V  
Sbjct: 388 DGLLRFAGAEADPEDYPALLADLDVIVKEFGTVDLVELDIAAMLTALTQMAQRHGIEVPS 447

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVM 604
            V TV    + LEG   +  P  N++
Sbjct: 448 TVTTVGRALVTLEGLLDEFIPDVNMI 473


>gi|167579863|ref|ZP_02372737.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           thailandensis TXDOH]
          Length = 525

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 185/395 (46%), Gaps = 23/395 (5%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE+ GP F+K+GQ  +TR DL P D   +L++L  + P    A     +E++ G R+ 
Sbjct: 54  RALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARID 113

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
           E+FD FE  PVAS SIAQVH A L+    G+  K   VAVKV  P +   I  D  ++ +
Sbjct: 114 ELFDEFEREPVASASIAQVHFAKLK---QGEH-KGKAVAVKVLRPNMLPVIDSDLALMRD 169

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           +A     +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  
Sbjct: 170 IATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMF 229

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +    P+VLV     G  +S+ VD L+        LA  G       +  D F HADMHP
Sbjct: 230 WDYSTPSVLVMERMTGVPISQ-VDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHP 288

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V +  K   +          I LD G+   LS  D+  L + F A  +RD    A 
Sbjct: 289 GNIQVSLDPKHFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA- 338

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNV 576
            TL L      P+ +  +EE++ A      P  D     +   + + +L    RR  V +
Sbjct: 339 -TLHLESGWVPPDTR--VEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEI 395

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 396 QPQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|331006023|ref|ZP_08329366.1| Ubiquinone biosynthesis monooxygenase UbiB [gamma proteobacterium
           IMCC1989]
 gi|330420199|gb|EGG94522.1| Ubiquinone biosynthesis monooxygenase UbiB [gamma proteobacterium
           IMCC1989]
          Length = 539

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 188/402 (46%), Gaps = 31/402 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LET GP FIK+GQ  +TRPDL P D+  +L+ L    P  S A  K  +E++    + E+
Sbjct: 53  LETLGPIFIKFGQLLSTRPDLVPHDIVAELNHLQDNVPPFSPALFKAIVEQSLDDPIEEV 112

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F E P+AS SIAQVH A+L+    GQK     V VKV  P + ++I +D  ++   A
Sbjct: 113 FSKFNEQPLASASIAQVHTATLQ---NGQK-----VVVKVIRPEIEKTITKDIALLRWVA 164

Query: 344 KISSV-IPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           K +   +   K LR  E V+ ++  +  ++DL REAA+ S+   NF     +  P+ ++ 
Sbjct: 165 KRAEQWLSEGKRLRPVEIVEDYSRTIFDELDLQREAANASQLRRNFEHSPLLYVPEIIWQ 224

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
             +  +LV     G  V+  +DEL   +     LA  G       +   NF HADMHPGN
Sbjct: 225 YSNKNMLVMERIYGIPVAN-IDELVAQKTNMKKLAERGVEIFFTQVFEHNFFHADMHPGN 283

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V     ++         P  I +D+ +   LS+ D+  L     A+ RRD R  AE  
Sbjct: 284 IFVSRENPQA---------PQYIAVDMAIVGSLSREDQFYLARNLLAMFRRDYRQVAELH 334

Query: 523 LRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
           ++     N       I+E + A        +  P  ++      +  L +  +R  + V 
Sbjct: 335 IQSGWVPNTTR----IDEFEAAVRTVCEPIFQKPLAEISF-GHVLISLFQTAQRFNMEVQ 389

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
             +  +  T L +EG  R+L P  ++ +T    L +  W K+
Sbjct: 390 PQLVLLQKTLLNIEGLGRQLYPELDLWETAHPYLER--WIKN 429


>gi|345860897|ref|ZP_08813181.1| ABC1 family protein [Desulfosporosinus sp. OT]
 gi|344326009|gb|EGW37503.1| ABC1 family protein [Desulfosporosinus sp. OT]
          Length = 558

 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 179/385 (46%), Gaps = 23/385 (5%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + +E  GP ++K GQ A+TR D+ P D+  +L +L    P  SF    + IE   G  + 
Sbjct: 61  QVIEELGPTYVKIGQIASTRADIIPEDILHELEKLQDNVPPFSFEEVARIIEEELGSPIG 120

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIIN 340
           +IF  FEE  +A+ SI QVHRA LR    G+     VVAVKV+ P +   I  D  ++++
Sbjct: 121 DIFSSFEEKVIAAASIGQVHRAQLR---TGE-----VVAVKVQRPQIKAMIETDLEILLD 172

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           LA      +  ++ L+L E V++FA  + +++D + EA +  +    F+    +  P   
Sbjct: 173 LATLAEHRMERMERLQLREVVEEFAKSLRNELDYSIEARNAEKIAKQFKNDPKIHIPSIY 232

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +      VL   +  G+ ++++ +E++     + A+A     AL   +L++ F HAD HP
Sbjct: 233 WDFSTRIVLTMEFVDGQKLNQF-EEIKKMGYDRKAIAEQLVQALFHQMLIEGFFHADPHP 291

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI +              S   + F+D GM   L+   + N      A+ R+   +  +
Sbjct: 292 GNIFL-------------LSGGVISFIDFGMVGRLTADMKNNFASLVIAMMRQSTESMIK 338

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
             LR+    +         +VDE    +       +   E +  L     +H++ +  + 
Sbjct: 339 AILRIGIVPDEVKLPLLTNDVDELREKYMDVPMSRISLGEAVSDLFVVAFKHQIRIPADF 398

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMD 605
             V  + L+LEG   KLDP  ++MD
Sbjct: 399 TMVAKSLLILEGIVEKLDPKLSIMD 423


>gi|306823803|ref|ZP_07457177.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
 gi|304552801|gb|EFM40714.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
          Length = 610

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 184/386 (47%), Gaps = 31/386 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  + R ++ P+  C +L++L + A    ++   + +E  +GR + EI
Sbjct: 114 LEALGPTFVKVGQILSMRSEILPQPFCDELAKLRADADPMPYSTVLQVLEDEYGRPVDEI 173

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           FD  +  P+ S S+AQVHRA L     G+      VA+KV+ PGV E++ +D  I+   A
Sbjct: 174 FDHIDATPLGSASLAQVHRAKLT---SGED-----VAIKVQRPGVRETMAQDVSIMRSIA 225

Query: 344 KISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           K+++  + + + + L   V++      S+ D   EA +LS F     R+K +  PKP   
Sbjct: 226 KVATRTMHSAQVVDLSGVVEELWDTFESETDFLVEARNLSEFNRFCERYKYMDCPKPYID 285

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL---LKMLLVDNFIHADMH 459
           L    V+V  Y +G  VS     L+    LK     IGT  +      +L + F HAD H
Sbjct: 286 LCTEHVVVMDYVEGISVSHPDQLLEAGYDLK----EIGTKLVDNYATQVLDEGFFHADPH 341

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGNI+V              S   ++ LD+GMT  L+   R  L +   AVA +D    A
Sbjct: 342 PGNIMV--------------SGGRIVLLDLGMTGRLNAKTRSVLKDMIFAVAEQDSPALA 387

Query: 520 ECTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
           +  LR +  +  P    A + ++D     +GT +   +  A  +  L +  +RH + V  
Sbjct: 388 DGLLRFAGAEADPEDYPALLADLDVIVKEFGTVDLVELDIAAMLTALTQMAQRHGIEVPS 447

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVM 604
            V TV    + LEG   +  P  N++
Sbjct: 448 TVTTVGRALVTLEGLLDEFIPDVNMI 473


>gi|390937592|ref|YP_006395152.1| hypothetical protein BBB_1683 [Bifidobacterium bifidum BGN4]
 gi|389891206|gb|AFL05273.1| putative protein in hydrogenase [Bifidobacterium bifidum BGN4]
          Length = 621

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 189/392 (48%), Gaps = 37/392 (9%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  + R ++ P+  C +L++L + A    +     T+ + +GR + E+
Sbjct: 125 LEALGPTFVKVGQILSMRSEILPQSFCDELAKLRADADPMPYQIVVDTLTQEYGRPIGEV 184

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F   +  P+ S S+AQVHRA+L        V    VAVKV+ PGV E +  D  I+ ++A
Sbjct: 185 FARIDPTPLGSASLAQVHRATL--------VTGEDVAVKVQRPGVREIMALDVSIMRSIA 236

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
              + ++P+ + + L   V++      S+ D   EA +LS F      ++ +  PKP   
Sbjct: 237 RAATKMLPSAQVVDLGGVVEELWDTFESETDFLVEARNLSEFKRFCEAYRYMDCPKPYMD 296

Query: 403 LVHPAVLVETYEQGECVSRYVDEL--QGHERLKSALAHIGTHAL---LKMLLVDNFIHAD 457
           L    V+V  Y +G  VS + D+L   G++     L  IGT  +      +L D F HAD
Sbjct: 297 LCTEHVVVMDYVEGIAVS-HTDQLIEAGYD-----LKEIGTKLVDNYATQVLDDGFFHAD 350

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGNI++   Q              ++ +D+GMT  L+   R  L E   AVA++D   
Sbjct: 351 PHPGNIIISGGQ--------------IVLIDLGMTGRLNSQARSVLREMIFAVAKQDSAA 396

Query: 518 AAECTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPE-GDLVHPAECMQQLLEKVRRHRVN 575
            A+  LR +  ++ P    A + ++D     +GT + GDL   A  +  L    +RH + 
Sbjct: 397 LADGLLRFAGTESDPEDYPALLADLDMVVKEFGTVDLGDL-DIAAFLTSLTSLAQRHGIE 455

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
           V G V TV    + LEG   +  P  N++  +
Sbjct: 456 VPGTVTTVGRALVTLEGLLDEFIPDVNMIQII 487


>gi|300313189|ref|YP_003777281.1| ubiquinone biosynthesis transmembrane protein [Herbaspirillum
           seropedicae SmR1]
 gi|300075974|gb|ADJ65373.1| ubiquinone biosynthesis transmembrane protein [Herbaspirillum
           seropedicae SmR1]
          Length = 524

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 188/396 (47%), Gaps = 29/396 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE  GP FIK+GQ  +TR DL P D+  +L+ L  + P        K IE++ G    
Sbjct: 56  RALEDLGPIFIKFGQVLSTRRDLMPPDIANELTLLQDRVPPFDSELAVKQIEKSLGAHPD 115

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
            +F  FE  PVAS SIAQVH A+L+    G++     VAVKV  PG+ + I  D  ++++
Sbjct: 116 LLFATFERTPVASASIAQVHFATLK---DGKE-----VAVKVLRPGMRDIIDHDIGLMHV 167

Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           AA  +  +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  
Sbjct: 168 AADWLERLWADGRRLKAKEVVGEFDKYLHDELDLMREAANASQLRRNFAESTLLMVPEMY 227

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +    P+V+V     G  +S+  + L+      S L+  G       +  D F HADMHP
Sbjct: 228 WDYCSPSVIVMERMHGIPISQ-TERLRAEGVDLSKLSRDGVEIFFTQVFRDGFFHADMHP 286

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNILV VA +         S    I LD G+   L+  D+  L + F A  RRD +  AE
Sbjct: 287 GNILVSVAPE---------SFGRYIALDFGIVGTLNDFDKDYLSQNFLAFFRRDYKRVAE 337

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
             +    +         ++E++ A        +  P  D+    + + +L +  RR  V 
Sbjct: 338 AHI----ESGWAPKDTRVDELEAAVRACCEPIFDRPLKDISF-GQVLLRLFQTSRRFNVE 392

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 393 VQPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAKPYL 428


>gi|187927439|ref|YP_001897926.1| putative ubiquinone biosynthesis protein UbiB [Ralstonia pickettii
           12J]
 gi|241661969|ref|YP_002980329.1| ubiquinone biosynthesis protein UbiB [Ralstonia pickettii 12D]
 gi|309779859|ref|ZP_07674614.1| 2-polyprenylphenol 6-hydroxylase [Ralstonia sp. 5_7_47FAA]
 gi|404385108|ref|ZP_10985497.1| 2-polyprenylphenol 6-hydroxylase [Ralstonia sp. 5_2_56FAA]
 gi|187724329|gb|ACD25494.1| 2-polyprenylphenol 6-hydroxylase [Ralstonia pickettii 12J]
 gi|240863996|gb|ACS61657.1| 2-polyprenylphenol 6-hydroxylase [Ralstonia pickettii 12D]
 gi|308921436|gb|EFP67078.1| 2-polyprenylphenol 6-hydroxylase [Ralstonia sp. 5_7_47FAA]
 gi|348616531|gb|EGY66031.1| 2-polyprenylphenol 6-hydroxylase [Ralstonia sp. 5_2_56FAA]
          Length = 525

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 188/396 (47%), Gaps = 27/396 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+  +L++L  + P          +E++ G+ LS 
Sbjct: 56  ALEQLGPIFVKFGQVLSTRRDLLPPDVADELAKLQDRVPPFDPKVAAAIVEKSLGKPLSA 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFR-YPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
           +F  F+  PVAS SIAQVH A+LR   Y G++     VAVKV  PG+   I  D  ++ +
Sbjct: 116 LFHRFDHHPVASASIAQVHFATLRGGPYDGRE-----VAVKVLRPGMLPVIDSDLALMRD 170

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           LA  I  +    K L+  E V +F  ++  ++DL REAA+ S+   NF +   +  P+  
Sbjct: 171 LATWIEKLWADAKRLKPREVVAEFDKYLHDELDLMREAANASQLRRNFAKSDLLLVPEVF 230

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +      V V     G  +S + +EL+        LA  G       +  D F HADMHP
Sbjct: 231 WDWCTSEVFVMERMHGMRIS-HTEELRAAGVDMHKLARDGVEIFFTQVFRDGFFHADMHP 289

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNILV VA +   +          I LD G+   LS+ D+  L + F A  +RD    A 
Sbjct: 290 GNILVSVAPETLGR---------YIALDFGIVGALSEFDKNYLAQNFLAFFQRDYHRVAV 340

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
               L  +      +  +EE++ A       ++  P G+ +     + +L +  RR  V 
Sbjct: 341 ----LHIESGWAPEETRVEELEGAIRACCEPYFDRPLGE-ISLGLVLMRLFQTSRRFNVE 395

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 396 VQPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAKPFL 431


>gi|421750056|ref|ZP_16187366.1| ubiquinone biosynthesis protein UbiB [Cupriavidus necator HPC(L)]
 gi|409770963|gb|EKN53426.1| ubiquinone biosynthesis protein UbiB [Cupriavidus necator HPC(L)]
          Length = 524

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 187/400 (46%), Gaps = 37/400 (9%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L   GP F+K+GQ  +TR DL P D+  +L+ L  + P    A     IER+ GR L+++
Sbjct: 58  LTRLGPIFVKFGQVLSTRRDLLPADIADELALLQDQVPPFDPAVAVAIIERSLGRPLTQL 117

Query: 284 FDGFEEAPVASGSIAQVHRASLRFR-YPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           F+ FE  PVAS SIAQVH A+L+   Y G++     VAVKV  PG+   I  D  ++ ++
Sbjct: 118 FETFEHQPVASASIAQVHFATLKAGPYRGRE-----VAVKVLRPGMLPVIDSDLALMRDV 172

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  I  V    K L+  E V +F  ++  ++DL  EAA+ S+   NF+  + +  P+  +
Sbjct: 173 AVWIERVSADGKRLKPREVVAEFDKYLHDELDLMIEAANASQLRRNFQDTELLLVPEVFW 232

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIH 455
                 V V     G  +SR        E LK+A      LA  G       +  D F H
Sbjct: 233 DFCSSEVFVMERMHGIPISRT-------ESLKAAGVDLHRLAEEGVEIFFTQVFRDGFFH 285

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
           ADMHPGNILV V  +   +          I LD G+   LS+ D+  L + F A  RRD 
Sbjct: 286 ADMHPGNILVSVQPETFGR---------YIALDFGIVGALSEFDKNYLAQNFIAFFRRDY 336

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRR 571
              A     L  +     P+  +EE++ A      P  D     +     + +L +  RR
Sbjct: 337 HRVA----LLHVESGWVPPQTRVEELESAVRACCEPYFDKPLKEISLGMVLMRLFQTSRR 392

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             V +   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 393 FNVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPYL 432


>gi|300114769|ref|YP_003761344.1| 2-polyprenylphenol 6-hydroxylase [Nitrosococcus watsonii C-113]
 gi|299540706|gb|ADJ29023.1| 2-polyprenylphenol 6-hydroxylase [Nitrosococcus watsonii C-113]
          Length = 557

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 182/400 (45%), Gaps = 33/400 (8%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           + RTLE  GP F+K+GQ  +TR DL P D+ ++L+ L  +         K+ IE A+G+R
Sbjct: 59  IRRTLEDLGPIFVKFGQLLSTRRDLLPDDIAEELTLLQDQVAPFPSEKAKEIIETAYGQR 118

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD---- 335
           LSE+F  F+E P+AS SIAQV+ A L   + G      +V VKV  PG+   I+ D    
Sbjct: 119 LSEVFASFDEKPLASASIAQVYAAQL---HDGS-----MVVVKVVRPGIKRIIQGDVDLL 170

Query: 336 FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS 395
           +++ NLA +  S  P    L   E V +    +  ++D+ RE A  S+   NF     + 
Sbjct: 171 YMLANLAERYWSEGPR---LHPREIVAELEKNLYDELDMLREGASASQLRRNFTGSNKLY 227

Query: 396 FPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIH 455
            P   +    P VLV    QG  ++  +DELQ +      LA  G       +   NF H
Sbjct: 228 VPLVHWHYTRPNVLVMERVQGVPINN-IDELQRYGTNFKQLAETGVEIFFTQVFRHNFFH 286

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
           ADMHPGNILV     ++         PH I LD G+   L   D+  L E F A    D 
Sbjct: 287 ADMHPGNILVSTENPQN---------PHYIALDFGIMGTLGPEDQRYLAENFLAFFNHDY 337

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRR 571
           R  AE    L            ++E + A      P  D     +   + + +L +  RR
Sbjct: 338 RRVAE----LHVDAGWVPAGTRVDEFESAIRSVCEPIFDRPLKEISFGQLLIRLFQTARR 393

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             + +   +  +  T L +EG  R L P  ++  T + +L
Sbjct: 394 FHMEIQPQLVLLQKTLLNIEGLGRVLYPDLDLWQTAKPIL 433


>gi|333375451|ref|ZP_08467259.1| 2-polyprenylphenol 6-hydroxylase [Kingella kingae ATCC 23330]
 gi|332970300|gb|EGK09292.1| 2-polyprenylphenol 6-hydroxylase [Kingella kingae ATCC 23330]
          Length = 510

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 188/410 (45%), Gaps = 36/410 (8%)

Query: 217 LHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           L V LR  LE+ GP F+K GQ  +TRPDL P    ++LS+L  K P      +++ IE++
Sbjct: 57  LPVRLRLALESLGPIFVKLGQVLSTRPDLLPAAYAQELSKLQDKVPPFDIDLSRQQIEQS 116

Query: 276 FGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD 335
            G+ + E++  F+  PVAS SIAQVHRA+L   + G+      VAVKV  P + + I +D
Sbjct: 117 LGKPIHELYADFDPQPVASASIAQVHRATL---FTGE-----AVAVKVLRPNLTKIIEQD 168

Query: 336 FVIINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV 394
             ++ L A  I  +    K L+  E V +F  ++  ++DL REAA+ S+   NF     +
Sbjct: 169 LALMRLGAGCIERLFADGKRLKPREVVAEFDKYLHDELDLLREAANASQLRRNFENSDML 228

Query: 395 SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFI 454
             P+  +      VL   +  G  +S  +D L+        LA  G       +    F 
Sbjct: 229 IVPQVYFDYCSREVLTIEWMDGTPISD-IDRLREQNIDLHKLATFGVEIFFTQVFKHGFF 287

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           HADMHPGNILV    +              I LD G+   L+  D+  L   F A   RD
Sbjct: 288 HADMHPGNILVAPDGR-------------YIALDFGIVGSLTDYDKRYLAINFLAFFNRD 334

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKV 569
               A   +    +     P+   E+++ A        +  P  ++      M +L E  
Sbjct: 335 YHRVATAHI----ESGWVPPQTRAEDLESAVRAVCEPIFNKPLAEISFGIVLM-RLFETS 389

Query: 570 RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           RR  V +   +  +  T L +EG  R+LDP  ++  T +  L+K  W  S
Sbjct: 390 RRFNVEIQPQLVLLQKTLLNIEGLGRQLDPNLDLWQTARPFLIK--WMDS 437


>gi|226939442|ref|YP_002794515.1| ubiquinone biosynthesis protein UbiB [Laribacter hongkongensis
           HLHK9]
 gi|226714368|gb|ACO73506.1| Probable ubiquinone biosynthesis protein ubiB [Laribacter
           hongkongensis HLHK9]
          Length = 504

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 185/409 (45%), Gaps = 28/409 (6%)

Query: 210 PQFRELWLHVVLRT---LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFA 266
           P  R+L L + +R    LE+ GP F+K+GQ  +TR DL P D   + + L  + P    A
Sbjct: 39  PLPRDLSLPLPVRARLALESLGPVFVKFGQLLSTRRDLLPPDYADEFACLQDRVPPFDGA 98

Query: 267 YTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHP 326
             ++ +ER+ GR ++E+F  F+  PVAS S+AQVH+A L   + G      VVAVKV  P
Sbjct: 99  LAQREVERSLGRPVAELFAEFDPVPVASASVAQVHKARL---FDG-----TVVAVKVLRP 150

Query: 327 GVGESIRRDFVII-NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFI 385
            +   I  D  ++  LA  +  +    + LR  E V +F V +  ++DL REAA+ S   
Sbjct: 151 DIRPVIEADLALMYALAGWVERLSSDGRRLRPREVVDEFDVNLHDELDLTREAANASELR 210

Query: 386 YNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALL 445
            NF +   +  P+  +      V+V  +  G  V + +D L         L+  G     
Sbjct: 211 RNFEQSDMLVVPQVYWDYTCRNVMVLEWMDGIPVGQ-IDRLVAAGIDLKQLSRFGVEIFF 269

Query: 446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE 505
             +  D F HADMHPGNILV                   I LD G+   L++TD+  L  
Sbjct: 270 TQVFRDGFFHADMHPGNILV-------------APDGRYIALDFGIVGTLTETDKHYLAV 316

Query: 506 FFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAECMQQ 564
            F A   RD    A   +          P+     V      F+G P  ++      + +
Sbjct: 317 NFLAFFNRDYYRVATAHIESGWVPADTRPEQLAAAVRAVCEPFFGRPLSEISF-GLVLMR 375

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           L E  RR  V +   +  +  T L +EG  R+LDP  N+ DT +  L +
Sbjct: 376 LFEASRRFHVEIQPQLVLLQKTLLNIEGLGRQLDPDLNLWDTAKPFLTR 424


>gi|17545180|ref|NP_518582.1| ubiquinone biosynthesis protein UbiB [Ralstonia solanacearum
           GMI1000]
 gi|24418728|sp|Q8Y275.1|UBIB_RALSO RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|17427471|emb|CAD13989.1| probable ubiquinone biosynthesis ubib. transmembrane protein
           [Ralstonia solanacearum GMI1000]
          Length = 525

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 124/395 (31%), Positives = 186/395 (47%), Gaps = 25/395 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+  +L++L  + P          +ER+ G+ LS 
Sbjct: 56  ALEQLGPIFVKFGQVLSTRRDLLPPDVADELAKLQDRVPPFDPKIAAAIVERSLGKPLSA 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +F  F+  PVAS SIAQVH A+LR    G       VAVKV  PG+   I  D  ++ ++
Sbjct: 116 LFHRFDHHPVASASIAQVHFATLR----GGPDDGREVAVKVLRPGMLPVIDSDLALMRDV 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF + + +  P+  +
Sbjct: 172 ATWMEKLWADGKRLKPREVVAEFDKYLHDELDLMREAANASQLRRNFAKSELLLVPEVFW 231

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 V V     G  VS + DEL+        LA  G       +  D F HADMHPG
Sbjct: 232 DWCTSEVFVMERMHGVRVS-HADELRAAGVDTHKLARDGVEIFFTQVFRDGFFHADMHPG 290

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV VA +         S    I LD G+   LS+ D+  L + F A  +RD    A  
Sbjct: 291 NILVSVAPE---------SLGRYIALDFGIVGALSEFDKNYLAQNFLAFFQRDYHRVA-- 339

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
              L  +      +  +EE++ A       ++  P G+ +     + +L +  RR  V V
Sbjct: 340 --LLHVESGWAPEETRVEELEGAIRACCEPYFDRPLGE-ISLGLVLMRLFQTSRRFNVEV 396

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 397 QPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAKPFL 431


>gi|239905802|ref|YP_002952541.1| ubiquinone biosynthesis protein UbiB [Desulfovibrio magneticus
           RS-1]
 gi|239795666|dbj|BAH74655.1| putative ubiquinone biosynthesis protein UbiB [Desulfovibrio
           magneticus RS-1]
          Length = 557

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 193/419 (46%), Gaps = 34/419 (8%)

Query: 195 FSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLS 254
           F   ++++P   S     RE  L + L  L   G   IK GQ  +TR DL   ++  +LS
Sbjct: 40  FLKDLLVSPSGASLATLKREERLRLALTEL---GGTAIKLGQILSTRADLVGPEVAAELS 96

Query: 255 ELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKV 314
            L +     +    ++TI  A G  + E+F+GF+  P+AS SI QVHRA    R P    
Sbjct: 97  RLRADTEPDAPEAVERTIREALGAPVEELFEGFDPVPMASASIGQVHRA----RLPDGT- 151

Query: 315 KPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVF---MMSQ 371
               V VKVRH G+ E +R D  I+   A+++     V  LRL + +   A     ++ +
Sbjct: 152 ---AVVVKVRHAGIEERVRADLDILMGLAELAER--GVVELRLYQPLAVAAEMRRTILRE 206

Query: 372 VDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQ--GECVSRYVDELQGH 429
           +D  RE  +L  F  NF     V+FP+P YP    A  V T E+  GE +SR   EL   
Sbjct: 207 LDFVREERNLRHFAANFASEPGVAFPRP-YP-ERCAREVLTMEELVGEPLSRLAGELSPE 264

Query: 430 ERL-KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLD 488
               ++A+A +     L+M+  DNF HAD HPGN+LV    +                LD
Sbjct: 265 AAARRTAMAKLAADVFLEMIFRDNFFHADPHPGNLLVLPGDRLG-------------ILD 311

Query: 489 VGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFW 548
            GM   + +  R  + +   AVA  D     E  +R+ +     +  A   ++++  A +
Sbjct: 312 CGMVGRIDERTRRAMEDALLAVAEGDAEGLTEQVMRIGRLPPGLDRAALRADIEDFVADY 371

Query: 549 GTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
            + E         M  +   VRRH + +   V  ++   +VLEG  R L PG++++D +
Sbjct: 372 ASQELGAFDLGGAMADVAAIVRRHGILLPPVVAHLIKVFVVLEGASRTLSPGFSLIDVI 430


>gi|118594534|ref|ZP_01551881.1| putative ubiquinone biosynthesis [Methylophilales bacterium
           HTCC2181]
 gi|118440312|gb|EAV46939.1| putative ubiquinone biosynthesis [Methylophilales bacterium
           HTCC2181]
          Length = 506

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 183/389 (47%), Gaps = 33/389 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+  +L++L  + P  SF+  K  +E+A+ + L + 
Sbjct: 54  LEDLGPIFVKFGQMLSTRRDLLPDDIANELAKLQDQVPPFSFSIAKNILEKAYRKPLKQQ 113

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-LA 342
           F  F+E PVAS S+AQVH A L   Y GQ+     VAVK+  P + + I RD  ++  LA
Sbjct: 114 FIDFQETPVASASVAQVHFAKL---YTGQE-----VAVKILRPNIKKQIERDIKLLAWLA 165

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             + S+    + L+  E V +FA    S+++L  EA H S    NF+  K +  P+  + 
Sbjct: 166 YILESLWNDGRRLKPREVVSEFARHTKSELNLLLEAGHCSHLGENFKDKKLLIVPEVYWD 225

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
             +  V+V     G  +S  + EL         LA  G       +  D F HADMHPGN
Sbjct: 226 HCYDNVMVMERMNGIPISN-IKELNKRNIDIPTLARNGVEIFFTQVFRDGFFHADMHPGN 284

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I VR   K              I LD G+   LS+ D+  L   F    +RD R  AE  
Sbjct: 285 IQVRADGK-------------YIALDFGIMGTLSEEDKKYLARNFLCFFKRDYRGVAEAH 331

Query: 523 LRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
           +   +    P+  + ++E + A        +  P  ++    + + +L +  R+  + + 
Sbjct: 332 V---ESGWVPSGTS-VDEFENAIRSVCEPIFNKPLKEISF-GKLLIRLFQTSRQFNMEIQ 386

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
             +  +  T L +EG  R LDP  ++  T
Sbjct: 387 PQLTMLQKTLLNVEGLGRDLDPNLDLWQT 415


>gi|188591181|ref|YP_001795781.1| ubiquinone biosynthesis protein ubib [Cupriavidus taiwanensis LMG
           19424]
 gi|170938075|emb|CAP63059.1| 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway
           [Cupriavidus taiwanensis LMG 19424]
          Length = 525

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/393 (31%), Positives = 180/393 (45%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L   GP F+K+GQ  +TR DL P D+  +L++L  + P    A   + IER+ GR L ++
Sbjct: 57  LTRLGPIFVKFGQVLSTRRDLMPPDIADELAKLQDQVPPFDSAVAVRIIERSLGRPLDQL 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F+ FE  PVAS SIAQVH A+L+    G       VAVKV  PG+   I  D  ++ ++A
Sbjct: 117 FETFEHQPVASASIAQVHFATLK----GGPCHGREVAVKVLRPGMLPVIDSDLALMRDMA 172

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +       K L+  E V +F  ++  ++DL  EAA+ S+   NF     +  P+  + 
Sbjct: 173 TWLERFWADGKRLKPREVVAEFDKYLHDELDLMIEAANASQLRRNFADTNLLLVPEVFWD 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                V V     G  +SR  D L+        LA  G       +  D F HADMHPGN
Sbjct: 233 WCSSTVFVMERMHGIPISR-TDSLKAAGVDMHQLAEEGVEIFFTQVFRDGFFHADMHPGN 291

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           ILV V  +   +          I LD G+   LS+ D+  L + F A  RRD    A   
Sbjct: 292 ILVSVQPETFGR---------YIALDFGIVGALSEFDKNYLAQNFIAFFRRDYHRVA--- 339

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
             L  +     P+  +EE++ A      P  D     +     + +L +  RR  V +  
Sbjct: 340 -LLHVESGWVPPETRVEELESAVRACCEPYFDKPLKEISLGMVLMRLFQTSRRFNVEIQP 398

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 399 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFL 431


>gi|445494547|ref|ZP_21461591.1| ubiquinone biosynthesis protein UbiB [Janthinobacterium sp. HH01]
 gi|444790708|gb|ELX12255.1| ubiquinone biosynthesis protein UbiB [Janthinobacterium sp. HH01]
          Length = 522

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 187/395 (47%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P DL ++LS L  + P          I ++ G    +
Sbjct: 57  ALEELGPIFVKFGQVLSTRRDLIPADLVEELSRLQDRVPPFDSDLAIAQIRKSLGAHPDQ 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  FE  PVAS SIAQVH A+L+    G++     VAVKV  PG+ +SI  D  ++++A
Sbjct: 117 LFASFERTPVASASIAQVHFATLK---DGKQ-----VAVKVLRPGMKKSIDEDVALMHIA 168

Query: 343 AK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ I  V    K L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 169 AEWIGRVWADSKRLKPREVVAEFDKYLHDELDLMREAANASQLRRNFADSDLLLVPEMHW 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                +V+V     G  VS+ +D L+        L+  G       +  D F HADMHPG
Sbjct: 229 DYCSNSVIVMERMHGIPVSQ-IDRLEAAGVDLKKLSSDGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV +      +          I LD G+   L+  D+  L + F A  RRD +  AE 
Sbjct: 288 NILVSIDPATFGR---------YIALDFGIVGTLNDFDKDYLSQNFLAFFRRDYKRVAEA 338

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
            +    +      +  ++E++ A        +  P  D+    + + +L +  RR  V V
Sbjct: 339 HI----ESGWAPKETRVDELESAVRACCEPIFDRPLKDISF-GQILLRLFQTSRRFNVEV 393

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 394 QPQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPYL 428


>gi|424902183|ref|ZP_18325699.1| ubiquinone biosynthesis protein UbiB [Burkholderia thailandensis
           MSMB43]
 gi|390932558|gb|EIP89958.1| ubiquinone biosynthesis protein UbiB [Burkholderia thailandensis
           MSMB43]
          Length = 525

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 184/395 (46%), Gaps = 23/395 (5%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE+ GP F+K+GQ  +TR DL P D   +L++L  + P    A     +E++ G R+ 
Sbjct: 54  RALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARID 113

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
            +FD FE  PVAS SIAQVH A L+    G+  K   VAVKV  P +   I  D  ++ +
Sbjct: 114 ALFDEFEREPVASASIAQVHFAKLK---QGEH-KGRAVAVKVLRPNMLPVIDSDLALMRD 169

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           +A     +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  
Sbjct: 170 IATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMF 229

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +    PAVLV     G  +S+ VD L+        LA  G       +  D F HADMHP
Sbjct: 230 WDYSTPAVLVMERMTGVPISQ-VDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHP 288

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V +  K   +          I LD G+   LS  D+  L + F A  +RD    A 
Sbjct: 289 GNIQVSLDPKHFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA- 338

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNV 576
            TL L      P+ +  +EE++ A      P  D     +   + + +L    RR  V +
Sbjct: 339 -TLHLESGWVPPDTR--VEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEI 395

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 396 QPQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|89092185|ref|ZP_01165139.1| hypothetical protein MED92_05218 [Neptuniibacter caesariensis]
 gi|89083273|gb|EAR62491.1| hypothetical protein MED92_05218 [Oceanospirillum sp. MED92]
          Length = 544

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 188/400 (47%), Gaps = 27/400 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK+GQ  +TR DL P +L ++L +L  + P  S    +  IE+A  + +SE+
Sbjct: 59  LEALGPVFIKFGQMLSTRRDLLPDELAEELKKLQDRVPPFSGPKAQALIEQALEQPVSEL 118

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           F  FE  P+AS S+AQVH+A++     G++     V VKV  PG+G++IR+D  ++  +A
Sbjct: 119 FSEFEVEPLASASVAQVHKATMN---DGRE-----VVVKVIRPGIGKTIRKDVDLLYTMA 170

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             + +V    + LR  E V ++   +  ++DL +EAA+ S+   NF     +  P+  + 
Sbjct: 171 RLVQAVWQEGRRLRPVEVVSEYEQTIFDELDLRKEAANGSQLRRNFENSDILYIPEIYWD 230

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VLV     G  V+  VD+L         LA  G       +  D+F HADMHPGN
Sbjct: 231 FTRANVLVMERIHGIPVAE-VDQLNEQNTNMKLLAERGVEIFFTQVFRDSFFHADMHPGN 289

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V          R   S P  I +D G+   L+  D+  L   F A  +RD R  A+  
Sbjct: 290 IFV---------SRNNPSSPQYIAVDFGIIGSLTPEDQSYLARNFLAFFKRDYRLVAQLH 340

Query: 523 LRLSKQQNCPNPKAF---IEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +         N  AF   I  V E    +  P  ++    + +  L +  RR  + V   
Sbjct: 341 VDSGWVPADTNVDAFETAIRSVCE--PIFEKPLKEISF-GQVLLGLFQTARRFNMEVQPQ 397

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           +  +  T L +EG  R+L P  ++  T +  L   +W K 
Sbjct: 398 LVLLQKTLLNIEGLGRQLYPDLDLWKTAKPFL--ENWMKE 435


>gi|335424370|ref|ZP_08553380.1| protein kinase [Salinisphaera shabanensis E1L3A]
 gi|334889240|gb|EGM27529.1| protein kinase [Salinisphaera shabanensis E1L3A]
          Length = 539

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 130/403 (32%), Positives = 188/403 (46%), Gaps = 26/403 (6%)

Query: 217 LHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           L+V LR  LE  GP F+K+GQ  +TR DL P  + ++LS+L  + P    A  ++ IE A
Sbjct: 43  LNVRLRLALEELGPVFVKFGQTLSTRRDLLPEGMAEELSKLQDEVPPFEGAEARRLIEAA 102

Query: 276 FGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD 335
           +G  L + F+ FE  P+A+ SIAQVHRA L  R    + + +V  VKV  P V E I RD
Sbjct: 103 YGHSLDKFFEYFETEPMAAASIAQVHRARLHARAGEAQGREVV--VKVLRPDVHERIERD 160

Query: 336 FVII-NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV 394
             ++  LA   +   P  K LR  E V ++   +  ++DL RE A+ S+   N+     +
Sbjct: 161 VAVLYRLAGLAARFHPEAKRLRPVEIVAEYDRIITDELDLMREGANASQLGRNWAGSDLI 220

Query: 395 SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFI 454
             P+  +      VLV  +  G  +   VD L+        LA  G     K +  DNF 
Sbjct: 221 VHPEIHFDYSTETVLVMEHMYGVPIDD-VDTLKAAGVDFKVLAERGVEIFFKQVFRDNFF 279

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           HADMHPGNILV+              +P  + LD G+   L+  D+  L E F A   +D
Sbjct: 280 HADMHPGNILVQPEVPH---------RPRYVGLDFGIVGSLTADDQRYLAENFLAFFNQD 330

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP-AEC-----MQQLLEK 568
            R  AE    L  +         IEE + A      P   +  P AE      + +L + 
Sbjct: 331 YRKIAE----LHVESGWMPADTSIEEFEGAIRTVSEP--IMNKPLAEISFGLFLVRLFKI 384

Query: 569 VRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            RR+R  V   +  +  T L +EG  R L P  ++  T + +L
Sbjct: 385 ARRYRYQVQPQLVLLQKTVLNVEGLGRDLYPQLDLWATAKPVL 427


>gi|237810873|ref|YP_002895324.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           pseudomallei MSHR346]
 gi|254181776|ref|ZP_04888373.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei 1655]
 gi|184212314|gb|EDU09357.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei 1655]
 gi|237505586|gb|ACQ97904.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei
           MSHR346]
          Length = 525

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 184/395 (46%), Gaps = 23/395 (5%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE+ GP F+K+GQ  +TR DL P D   +L++L  + P    A     +E++ G R+ 
Sbjct: 54  RALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARID 113

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
            +FD FE  PVAS SIAQVH A L+    G+  K   VAVKV  P +   I  D  ++ +
Sbjct: 114 VLFDEFERVPVASASIAQVHFAKLK---QGEH-KGKAVAVKVLRPNMLPVIDSDLALMRD 169

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           +A     +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  
Sbjct: 170 IATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMF 229

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +    PAVLV     G  +S+ VD L+        LA  G       +  D F HADMHP
Sbjct: 230 WDYSTPAVLVMERMTGVPISQ-VDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHP 288

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V +  K   +          I LD G+   LS  D+  L + F A  +RD    A 
Sbjct: 289 GNIQVSLDPKHFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA- 338

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNV 576
            TL L      P+ +  +EE++ A      P  D     +   + + +L    RR  V +
Sbjct: 339 -TLHLESGWVPPDTR--VEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEI 395

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 396 QPQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|261409744|ref|YP_003245985.1| ABC-1 domain-containing protein [Paenibacillus sp. Y412MC10]
 gi|261286207|gb|ACX68178.1| ABC-1 domain protein [Paenibacillus sp. Y412MC10]
          Length = 556

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 189/387 (48%), Gaps = 27/387 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE  GPAF+K GQ A+TR DL P  + ++L +L  + P    A  ++ IE+ +G  + 
Sbjct: 59  RVLEDLGPAFVKLGQLASTRSDLLPDHIIQELVKLQERVPPFPSASARELIEQEWGMPID 118

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
           ++   F + P+A+ SI QVH   L+    G+     +VA+KV+ PGV   I RD  I+ +
Sbjct: 119 DVLSEFGDKPLAAASIGQVHAGRLK---SGE-----LVAIKVQRPGVARMIGRDLEILRD 170

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           L +        VK  R+D  V +FA  MM+++D + EA +  +        + V  P+  
Sbjct: 171 LISIAERHWEWVKQYRVDRIVDEFARAMMAELDYSHEARNAEKIASRMTEQEFVHIPRIY 230

Query: 401 YPLVHPAVLVETYEQGECVSRYVDEL-QGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
           +      VL+  Y +G  +SR  + + +GH+ LK+   H+ T  +L+ + ++ F HAD H
Sbjct: 231 WDYTSSKVLMMEYAEGLTLSRRQEIVAKGHD-LKAIAEHL-TDGMLQQIFIEGFFHADPH 288

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGN+LVR   K             ++FLD G+   LS+  + +L     A+ RR+     
Sbjct: 289 PGNLLVREDGK-------------LVFLDFGLVGHLSEDMKDHLSGLIIALMRRNSEGMI 335

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAF-AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
               R+    +  +  A   ++D     ++  P    V   + +  L    +RH++ +  
Sbjct: 336 RAISRMGLIPDDCDMDALRSDMDRLREEYYDVPFAQ-VRIGKALTDLFAVAQRHQIMLPP 394

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMD 605
           ++  +  + L LEG    LDP  +++D
Sbjct: 395 DMTLLGKSLLTLEGVIEMLDPSLSIID 421


>gi|53718283|ref|YP_107269.1| ubiquinone biosynthesis protein UbiB [Burkholderia pseudomallei
           K96243]
 gi|53724993|ref|YP_102026.1| ubiquinone biosynthesis protein UbiB [Burkholderia mallei ATCC
           23344]
 gi|67642495|ref|ZP_00441251.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia mallei GB8 horse 4]
 gi|76809712|ref|YP_332261.1| ubiquinone biosynthesis protein UbiB [Burkholderia pseudomallei
           1710b]
 gi|121600837|ref|YP_994053.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia mallei
           SAVP1]
 gi|124386526|ref|YP_001028283.1| ubiquinone biosynthesis protein UbiB [Burkholderia mallei NCTC
           10229]
 gi|126439433|ref|YP_001057722.1| ubiquinone biosynthesis protein UbiB [Burkholderia pseudomallei
           668]
 gi|126448665|ref|YP_001081927.1| ubiquinone biosynthesis protein UbiB [Burkholderia mallei NCTC
           10247]
 gi|126451540|ref|YP_001064968.1| ubiquinone biosynthesis protein UbiB [Burkholderia pseudomallei
           1106a]
 gi|134279749|ref|ZP_01766461.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei 305]
 gi|167001916|ref|ZP_02267706.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia mallei PRL-20]
 gi|167718142|ref|ZP_02401378.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           pseudomallei DM98]
 gi|167737172|ref|ZP_02409946.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           pseudomallei 14]
 gi|167814305|ref|ZP_02445985.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           pseudomallei 91]
 gi|167822780|ref|ZP_02454251.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           pseudomallei 9]
 gi|167844355|ref|ZP_02469863.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           pseudomallei B7210]
 gi|167892868|ref|ZP_02480270.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           pseudomallei 7894]
 gi|167901354|ref|ZP_02488559.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           pseudomallei NCTC 13177]
 gi|167909584|ref|ZP_02496675.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           pseudomallei 112]
 gi|167917598|ref|ZP_02504689.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           pseudomallei BCC215]
 gi|217419992|ref|ZP_03451498.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei 576]
 gi|226196715|ref|ZP_03792295.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei
           Pakistan 9]
 gi|242315053|ref|ZP_04814069.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei 1106b]
 gi|254177003|ref|ZP_04883660.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia mallei ATCC 10399]
 gi|254187706|ref|ZP_04894218.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei Pasteur
           52237]
 gi|254196462|ref|ZP_04902886.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei S13]
 gi|254203709|ref|ZP_04910069.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia mallei FMH]
 gi|254208684|ref|ZP_04915032.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia mallei JHU]
 gi|254258130|ref|ZP_04949184.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei 1710a]
 gi|254296182|ref|ZP_04963639.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei 406e]
 gi|254360260|ref|ZP_04976530.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia mallei 2002721280]
 gi|386862921|ref|YP_006275870.1| ubiquinone biosynthesis protein UbiB [Burkholderia pseudomallei
           1026b]
 gi|403517337|ref|YP_006651470.1| ubiquinone biosynthesis protein UbiB [Burkholderia pseudomallei
           BPC006]
 gi|418392411|ref|ZP_12968190.1| ubiquinone biosynthesis protein UbiB [Burkholderia pseudomallei
           354a]
 gi|418537589|ref|ZP_13103224.1| ubiquinone biosynthesis protein UbiB [Burkholderia pseudomallei
           1026a]
 gi|418542011|ref|ZP_13107470.1| ubiquinone biosynthesis protein UbiB [Burkholderia pseudomallei
           1258a]
 gi|418548339|ref|ZP_13113456.1| ubiquinone biosynthesis protein UbiB [Burkholderia pseudomallei
           1258b]
 gi|418554452|ref|ZP_13119238.1| ubiquinone biosynthesis protein UbiB [Burkholderia pseudomallei
           354e]
 gi|60390784|sp|Q62MP2.1|UBIB_BURMA RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|60390788|sp|Q63X97.1|UBIB_BURPS RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|123600245|sp|Q3JVZ2.1|UBIB_BURP1 RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|226713019|sp|A3MNU1.1|UBIB_BURM7 RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|226713020|sp|A2S8L4.1|UBIB_BURM9 RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|226713021|sp|A1V750.1|UBIB_BURMS RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|226713022|sp|A3NRJ7.1|UBIB_BURP0 RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|226713023|sp|A3N5V1.1|UBIB_BURP6 RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|52208697|emb|CAH34633.1| putative ubiquinone biosynthesis protein [Burkholderia pseudomallei
           K96243]
 gi|52428416|gb|AAU49009.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia mallei ATCC 23344]
 gi|76579165|gb|ABA48640.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei 1710b]
 gi|121229647|gb|ABM52165.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia mallei SAVP1]
 gi|124294546|gb|ABN03815.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia mallei NCTC 10229]
 gi|126218926|gb|ABN82432.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei 668]
 gi|126225182|gb|ABN88722.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei 1106a]
 gi|126241535|gb|ABO04628.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia mallei NCTC 10247]
 gi|134248949|gb|EBA49031.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei 305]
 gi|147745221|gb|EDK52301.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia mallei FMH]
 gi|147750560|gb|EDK57629.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia mallei JHU]
 gi|148029500|gb|EDK87405.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia mallei 2002721280]
 gi|157805730|gb|EDO82900.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei 406e]
 gi|157935386|gb|EDO91056.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei Pasteur
           52237]
 gi|160698044|gb|EDP88014.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia mallei ATCC 10399]
 gi|169653205|gb|EDS85898.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei S13]
 gi|217397296|gb|EEC37312.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei 576]
 gi|225931246|gb|EEH27253.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei
           Pakistan 9]
 gi|238523659|gb|EEP87096.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia mallei GB8 horse 4]
 gi|242138292|gb|EES24694.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei 1106b]
 gi|243062326|gb|EES44512.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia mallei PRL-20]
 gi|254216819|gb|EET06203.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia pseudomallei 1710a]
 gi|385349505|gb|EIF56072.1| ubiquinone biosynthesis protein UbiB [Burkholderia pseudomallei
           1026a]
 gi|385356525|gb|EIF62625.1| ubiquinone biosynthesis protein UbiB [Burkholderia pseudomallei
           1258a]
 gi|385358243|gb|EIF64262.1| ubiquinone biosynthesis protein UbiB [Burkholderia pseudomallei
           1258b]
 gi|385370238|gb|EIF75496.1| ubiquinone biosynthesis protein UbiB [Burkholderia pseudomallei
           354e]
 gi|385375405|gb|EIF80179.1| ubiquinone biosynthesis protein UbiB [Burkholderia pseudomallei
           354a]
 gi|385660049|gb|AFI67472.1| ubiquinone biosynthesis protein UbiB [Burkholderia pseudomallei
           1026b]
 gi|403072980|gb|AFR14560.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           pseudomallei BPC006]
          Length = 525

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 184/395 (46%), Gaps = 23/395 (5%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE+ GP F+K+GQ  +TR DL P D   +L++L  + P    A     +E++ G R+ 
Sbjct: 54  RALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIAIVEKSLGARID 113

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
            +FD FE  PVAS SIAQVH A L+    G+  K   VAVKV  P +   I  D  ++ +
Sbjct: 114 VLFDEFERVPVASASIAQVHFAKLK---QGEH-KGKAVAVKVLRPNMLPVIDSDLALMRD 169

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           +A     +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  
Sbjct: 170 IATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMF 229

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +    PAVLV     G  +S+ VD L+        LA  G       +  D F HADMHP
Sbjct: 230 WDYSTPAVLVMERMTGVPISQ-VDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHP 288

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V +  K   +          I LD G+   LS  D+  L + F A  +RD    A 
Sbjct: 289 GNIQVSLDPKHFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA- 338

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNV 576
            TL L      P+ +  +EE++ A      P  D     +   + + +L    RR  V +
Sbjct: 339 -TLHLESGWVPPDTR--VEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEI 395

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 396 QPQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|332528581|ref|ZP_08404563.1| putative ubiquinone biosynthesis protein UbiB [Hylemonella gracilis
           ATCC 19624]
 gi|332041897|gb|EGI78241.1| putative ubiquinone biosynthesis protein UbiB [Hylemonella gracilis
           ATCC 19624]
          Length = 543

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 200/446 (44%), Gaps = 35/446 (7%)

Query: 176 YSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWG 235
           Y L E V+   R  +L V         P     G + RE         LE  GP F+K+G
Sbjct: 21  YGLDELVLSSFRKPWLRVAARIVAFGRPLNKPRGVRLRE--------ALERLGPIFVKFG 72

Query: 236 QWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASG 295
           Q  +TR DL P D+ ++L++L  + P  S      TIER+F + L  IF  F+  PVAS 
Sbjct: 73  QVLSTRRDLLPPDIAEELAKLQDRVPPFSSEVAVATIERSFRQPLDSIFSEFQREPVASA 132

Query: 296 SIAQVHRASLR---FRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-LAAKISSVIPA 351
           SIAQVH A LR    R+ G++     VAVKV  P +   I +D  ++  +AA + ++   
Sbjct: 133 SIAQVHFARLRGKDGRHVGRE-----VAVKVLRPNMLPVIEKDLALMRWMAAWVENLSAD 187

Query: 352 VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVE 411
            + L+  E V +F  ++  ++DL REAA  ++   N      V  P+  +   H  V+V 
Sbjct: 188 GRRLKPREVVAEFDSYLHDELDLVREAASAAQLRRNMAGLNLVLIPEMFWDYCHNDVIVM 247

Query: 412 TYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKK 471
               G  +S+     +    LK  LA  G       +  D F HADMHPGNI V      
Sbjct: 248 ERMHGIPISQTQRLREAGVDLKK-LARDGVTIFFTQVFRDGFFHADMHPGNIFV------ 300

Query: 472 SSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNC 531
           S+    F      I LD G+   L++ D+  L + F A  RRD +  AE    L  +   
Sbjct: 301 STDPATF---GRYISLDFGIVGTLTEFDKEYLAQNFTAFFRRDYKRVAE----LHIESGW 353

Query: 532 PNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTT 587
             P+  + E++ A      P  D     +     + +L +  RR  V +   +  +  T 
Sbjct: 354 VPPETRVNELEAAVRSVCEPYFDRPLKEISLGMVLLRLFQTSRRFNVEIQPQLVLLQKTL 413

Query: 588 LVLEGWQRKLDPGYNVMDTLQTLLLK 613
           L +EG  R LDP  ++  T +  L K
Sbjct: 414 LNIEGLGRDLDPDLDLWSTAKPFLEK 439


>gi|260558404|ref|ZP_05830600.1| ABC1 family protein [Enterococcus faecium C68]
 gi|430820901|ref|ZP_19439521.1| ubiquinone biosynthesis protein [Enterococcus faecium E0045]
 gi|430826320|ref|ZP_19444506.1| ubiquinone biosynthesis protein [Enterococcus faecium E0164]
 gi|430828896|ref|ZP_19447007.1| ubiquinone biosynthesis protein [Enterococcus faecium E0269]
 gi|430892935|ref|ZP_19484556.1| ubiquinone biosynthesis protein [Enterococcus faecium E1575]
 gi|431747117|ref|ZP_19535919.1| ubiquinone biosynthesis protein [Enterococcus faecium E2134]
 gi|431765024|ref|ZP_19553548.1| ubiquinone biosynthesis protein [Enterococcus faecium E4215]
 gi|260075578|gb|EEW63884.1| ABC1 family protein [Enterococcus faecium C68]
 gi|430439038|gb|ELA49421.1| ubiquinone biosynthesis protein [Enterococcus faecium E0045]
 gi|430445200|gb|ELA54974.1| ubiquinone biosynthesis protein [Enterococcus faecium E0164]
 gi|430482558|gb|ELA59673.1| ubiquinone biosynthesis protein [Enterococcus faecium E0269]
 gi|430555401|gb|ELA94939.1| ubiquinone biosynthesis protein [Enterococcus faecium E1575]
 gi|430607225|gb|ELB44552.1| ubiquinone biosynthesis protein [Enterococcus faecium E2134]
 gi|430629507|gb|ELB65907.1| ubiquinone biosynthesis protein [Enterococcus faecium E4215]
          Length = 581

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 182/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 35  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 94

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 95  LSDIFDDFSKSPFASASMGQAHRAKLK---NGDS-----VVVKIQHPNIAEEIRLDLQLF 146

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 147 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRIPKI 206

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++   G E         +LK  +A +     +K +  
Sbjct: 207 YDAFCSKKVIVMEEMSGKNLNHLMNAKNGTETFITGIQNKQLKQEVAKLLVENFMKQVFD 266

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V     Q ++SQK             FR+         P+ + +
Sbjct: 267 DGFFHADPHPGNLLFHVLTKEEQTRASQKTETVHEKEFGSFTFRASTSTEDPVAPYTVNY 326

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 327 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGVFDESRFHQELTSFLE 386

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 387 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 445


>gi|253998156|ref|YP_003050219.1| ABC-1 domain-containing protein [Methylovorus glucosetrophus
           SIP3-4]
 gi|313200225|ref|YP_004038883.1| ABC-1 domain-containing protein [Methylovorus sp. MP688]
 gi|253984835|gb|ACT49692.1| ABC-1 domain protein [Methylovorus glucosetrophus SIP3-4]
 gi|312439541|gb|ADQ83647.1| ABC-1 domain protein [Methylovorus sp. MP688]
          Length = 559

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 180/391 (46%), Gaps = 24/391 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           ++  GP F+K GQ  ATRPD+FP +   + ++L  + P  +F      +E+A GR   ++
Sbjct: 68  IQELGPTFVKLGQVLATRPDIFPPNWIAEFAKLQDQVPPVAFEELLPELEKALGRSPFDV 127

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           F  F+  P+A  SIAQVH A L+   P        V +K+R P V  SI  D  ++++L 
Sbjct: 128 FRDFQVEPIAGASIAQVHLAKLQDGTP--------VVLKIRRPNVQHSIDADLRLLMHLG 179

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             + +     +  + +E + QF+  +  ++DLA E  +  RF  NF + K+V F K  + 
Sbjct: 180 KLVEAEFEQARRFQPEEIISQFSKSLKRELDLALEGRNTERFAQNFAKDKNVKFAKIFWE 239

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
               +VLV  +  G   +   +  +    LK  LA  G +A+LKM+L+D F HAD HPGN
Sbjct: 240 FTSESVLVMEHIDGIAGNALQEAREAGLDLK-LLAERGANAVLKMVLIDGFFHADPHPGN 298

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I              +     V  +D GM   +S   R  + +   A+  RD  T  +  
Sbjct: 299 I-------------FYLENNRVAIIDCGMVGRISFERRGEIADLLAALVSRDIDTLRDIL 345

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCT 582
           +  +        K    +VDE    +       +  +  +  L   +R + ++V  ++  
Sbjct: 346 IIWAGDAEVDEAK-LSADVDEFICNYDNAPLKHLKFSALLNDLTTIMRENHLSVPPDLTM 404

Query: 583 VMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +    + LEG  R+LDP + ++  L   + K
Sbjct: 405 LFKALVTLEGLGRQLDPDFQIVSHLTPFVKK 435


>gi|354581665|ref|ZP_09000568.1| ABC-1 domain-containing protein [Paenibacillus lactis 154]
 gi|353200282|gb|EHB65742.1| ABC-1 domain-containing protein [Paenibacillus lactis 154]
          Length = 556

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 182/385 (47%), Gaps = 23/385 (5%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE  GPAF+K GQ A+TR DL P  + ++L +L  + P  S A  ++ IE+ +G  + 
Sbjct: 59  RVLEDLGPAFVKLGQLASTRSDLLPDHIIQELVKLQERVPPFSSASARELIEQEWGMPIH 118

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           E+   FEE P+A+ SI QVH   L+    G++     VA+KV+ PGV   I RD  I+  
Sbjct: 119 EVLQEFEEKPLAAASIGQVHAGLLK---SGER-----VAIKVQRPGVARMIGRDLEILRD 170

Query: 342 AAKISSV-IPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
              I+      VK  R+D  V +FA  MM+++D + EA +  +        + +  P+  
Sbjct: 171 MISIAERHWDWVKQYRVDRIVDEFARAMMAELDYSHEARNAEKISSRLDDHEYIRIPRIY 230

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +      VL+  + +G  +SR  +       LK    H+    +L+ + ++ F HAD HP
Sbjct: 231 WEYTSSKVLMMEFAEGITLSRRQELAAKDYDLKEIAEHL-IDGMLQQIFIEGFFHADPHP 289

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GN+LV    K             ++FLD G+  +LS+  R +L     A+ RR+      
Sbjct: 290 GNLLVAEDGK-------------LVFLDFGLVGQLSEDMRDHLSGLIIALMRRNSEGMIR 336

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
              ++    +  +  A   ++D   + +       V   + +  L    +RHR+ +  ++
Sbjct: 337 AISKMGLIPDDCDMDALRSDMDRLRSEYYDVPFSQVRLGKALTDLFTVAQRHRIMLPPDL 396

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMD 605
             +  + L LEG    LDP  +++D
Sbjct: 397 TLLGKSLLTLEGVIEMLDPEISIID 421


>gi|374365071|ref|ZP_09623167.1| putative ubiquinone biosynthesis protein UbiB [Cupriavidus
           basilensis OR16]
 gi|373103443|gb|EHP44468.1| putative ubiquinone biosynthesis protein UbiB [Cupriavidus
           basilensis OR16]
          Length = 525

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 181/396 (45%), Gaps = 23/396 (5%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L   GP F+K+GQ  +TR DL P D+  +L++L  + P        K IER+ GR+L+ 
Sbjct: 56  ALTRLGPIFVKFGQVLSTRRDLMPEDIADELAKLQDQVPPFDSVVAVKIIERSLGRKLAT 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +F+ F+  PVAS SIAQVH A L+    G       VAVKV  PG+   I  D  ++ +L
Sbjct: 116 LFESFDHKPVASASIAQVHFAILK----GGPNHGREVAVKVLRPGMLPVIDSDLALMRDL 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +       K L+  E V +F  ++  ++DL  EAA+ S+   NF   K +  P+  +
Sbjct: 172 AAWLERFWADGKRLKPREVVAEFDKYLHDELDLMIEAANASQLRRNFADTKLLLVPEVFW 231

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 V V     G  +SR  + L+        LA  G       +  D F HADMHPG
Sbjct: 232 DWCSSEVFVMERMHGIPISR-TESLRAAGVDMHLLAEEGVEIFFTQVFRDGFFHADMHPG 290

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV VA +         S    I LD G+   LS+ D+  L + F A  RRD    A  
Sbjct: 291 NILVSVAPQ---------SFGRYIALDFGIVGALSEFDKNYLAQNFIAFFRRDYHRVA-- 339

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVD 577
              L  +         +EE++ A      P  D     +     + +L +  RR  V + 
Sbjct: 340 --LLHVESGWVPANTRVEELESAVRACCEPYFDKPLKEISLGMVLMRLFQTSRRFNVEIQ 397

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 398 PQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLEK 433


>gi|124266259|ref|YP_001020263.1| ubiquinone biosynthesis protein UbiB [Methylibium petroleiphilum
           PM1]
 gi|124259034|gb|ABM94028.1| 2-octaprenylphenol hydroxylase [Methylibium petroleiphilum PM1]
          Length = 525

 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 186/400 (46%), Gaps = 39/400 (9%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+  +L++L    P          +E AFGR L +
Sbjct: 56  ALERLGPIFVKFGQVLSTRRDLLPVDVADELAKLQDDVPPFPAEQAVALVEAAFGRPLDQ 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  FE  PVAS SIAQVH A L+    G++     VAVKV  PGV + I  D  ++ + 
Sbjct: 116 LFASFEHEPVASASIAQVHFAVLK---NGRE-----VAVKVLRPGVLQIIDSDLALLRVL 167

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +    A  K L+  E V +F  ++  ++DL REAA+ ++   N      V  P+ ++
Sbjct: 168 AGWADRYSADGKRLKPREVVAEFDKYLHDELDLVREAANATQLRRNMEGLDLVLVPEMIW 227

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIH 455
            L  P V+V     G  +S+         RL+ A      LA  G       +  D F H
Sbjct: 228 DLCTPGVMVMERMTGVPISQVA-------RLREAGIDFQKLARDGVTIFFTQVFRDGFFH 280

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
           ADMHPGNI V VA +   +          + LD G+   L+++D+  L + F A  RRD 
Sbjct: 281 ADMHPGNIQVSVAPQTFGR---------YVALDFGIIGTLTESDKDYLAQNFIAFFRRDY 331

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRR 571
           +  AE  L    +         I+E++ A      P  D     +   + + +L +  RR
Sbjct: 332 KRVAELHL----ESGWVPAGTRIDELEGAIRACCEPYFDRPLKEISLGQVLLRLFQTSRR 387

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             V +   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 388 FNVEIQPQLVLLQKTLLNVEGLGRQLDPELDLWSTAKPFL 427


>gi|319761672|ref|YP_004125609.1| 2-polyprenylphenol 6-hydroxylase [Alicycliphilus denitrificans BC]
 gi|330823543|ref|YP_004386846.1| 2-polyprenylphenol 6-hydroxylase [Alicycliphilus denitrificans
           K601]
 gi|317116233|gb|ADU98721.1| 2-polyprenylphenol 6-hydroxylase [Alicycliphilus denitrificans BC]
 gi|329308915|gb|AEB83330.1| 2-polyprenylphenol 6-hydroxylase [Alicycliphilus denitrificans
           K601]
          Length = 521

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 184/400 (46%), Gaps = 33/400 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P         TIER+F R + EI
Sbjct: 57  LERLGPIFVKFGQVLSTRRDLMPPDIADELALLQDRVPPFDPGIAIATIERSFRRPIGEI 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  FE  PVAS SIAQVH A +R R   ++     VAVKV  PG+   I +D  ++ + A
Sbjct: 117 FVSFEREPVASASIAQVHFAVIRDRQGIER----DVAVKVLRPGMLPVIDKDLALMRMMA 172

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  +    K L+  E V +F  ++  ++DL REAA+ ++   N      V  P+  + 
Sbjct: 173 GWVEGLSADGKRLKPREVVAEFDNYLHDELDLVREAANAAQLRRNMEGLDLVLIPEVFWD 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIHA 456
             H  V V     G  +++        ERL++A      LA  G       +  D F HA
Sbjct: 233 FCHADVAVMERMNGVPINQV-------ERLRAAGVDIPKLARDGVTIFFTQVFRDGFFHA 285

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNI V + Q    +          I LD G+   L++ D+  L + F A  RRD +
Sbjct: 286 DMHPGNIQVSLDQSTFGR---------YISLDFGIVGTLTEFDKEYLAQNFTAFFRRDYK 336

Query: 517 TAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
             AE  +    +         +A I  V E +      E  L      + +L +  RR +
Sbjct: 337 RVAELHIESGWVPASTRVNELEAAIRTVCEPYFDRPLKEISL---GMVLLRLFQTSRRFQ 393

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           V +   +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 394 VEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWSTAKPFLEK 433


>gi|91786765|ref|YP_547717.1| putative ubiquinone biosynthesis protein UbiB [Polaromonas sp.
           JS666]
 gi|91695990|gb|ABE42819.1| 2-octaprenylphenol hydroxylase [Polaromonas sp. JS666]
          Length = 517

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 185/401 (46%), Gaps = 39/401 (9%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P    +     IE+AFGR L  I
Sbjct: 57  LEALGPIFVKFGQVMSTRRDLLPPDIADELARLQDRVPPFESSVAVAIIEKAFGRPLDRI 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  FE  PVAS SIAQVH A+L   + G++     VAVKV  P +  +I +D  ++++ A
Sbjct: 117 FATFEHTPVASASIAQVHFATL---HDGRE-----VAVKVLRPNMLPAIEKDLALMHMMA 168

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +       K L+  E V +F  ++  ++DL REAA+ ++   N +    V  P+  + 
Sbjct: 169 GWVEGASADGKRLKPREVVAEFDKYLHDELDLLREAANAAQLRRNMQDLNLVMIPEMFWD 228

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIHA 456
              P V+V    +G  + +        +RL+ A      LA  G       +  D F HA
Sbjct: 229 YCMPDVMVMERMKGVPIGQ-------SQRLRDASVDMKKLARDGVTIFFTQVFRDGFFHA 281

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNI V +A     +          I LD G+   L++ D+  L   F A  +RD +
Sbjct: 282 DMHPGNIQVSLAPDTFGR---------YISLDFGIVGTLTEVDKEYLAHNFSAFFQRDYK 332

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRH 572
             AE  L    +         ++E++ A      P  D     +     + +L +  RR 
Sbjct: 333 RVAELHL----ESGWVPATTRVDELEAAIRACCEPYFDRPLKEISLGLVLMRLFQTSRRF 388

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            V +   +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 389 HVEIQPQLVLLQKTLLNIEGLGRELDPELDLWSTAKPFLEK 429


>gi|424953768|ref|ZP_18368711.1| ABC1 family protein [Enterococcus faecium R494]
 gi|402938307|gb|EJX57323.1| ABC1 family protein [Enterococcus faecium R494]
          Length = 582

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 182/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 36  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 95

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 96  LSDIFDDFSKSPFASASMGQAHRAKLK---NGDS-----VVVKIQHPNIAEEIRLDLQLF 147

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 148 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRIPKI 207

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++   G E         +LK  +A +     +K +  
Sbjct: 208 YDAFCSKKVIVMEEMSGKNLNHLMNAKNGTETFITGIQNKQLKQEVAKLLVENFMKQVFD 267

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V     Q ++SQK             FR+         P+ + +
Sbjct: 268 DGFFHADPHPGNLLFHVLTKEEQTRASQKTETVHEKEFGSFTFRASTSTEDPVAPYTVNY 327

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 328 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGVFDESRFHQELTSFLE 387

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 388 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 446


>gi|399117357|emb|CCG20172.1| probable ubiquinone biosynthesis protein [Taylorella asinigenitalis
           14/45]
          Length = 512

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 205/444 (46%), Gaps = 38/444 (8%)

Query: 176 YSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWG 235
           YSL E V+  MR  Y     + +        S G + RE         LE  GP FIK+G
Sbjct: 16  YSLDELVLERMRNPYATTFLNLTRFGRNPTKSRGVRLRE--------ALEELGPIFIKFG 67

Query: 236 QWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASG 295
           Q  +TR D+ P+D+  +L  L  + P          IE  FG+ + E+F  F + P AS 
Sbjct: 68  QVLSTRRDIVPQDIADELQLLQDRVPPFPSKEAVSIIESTFGKSVDELFATFNKEPCASA 127

Query: 296 SIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLAAKISSVIPAVKW 354
           S+AQVH A+L   + G++     VAVK+  P + + I +D +++ + A  I   +P  K 
Sbjct: 128 SVAQVHEATL---HNGRR-----VAVKILRPEMQKVIEKDLLLLHSFAGFIQRFVPDGKR 179

Query: 355 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFR---RWKDVSFPKPVYPLVHPAVLVE 411
           L+  E + +F  ++  ++DL  EAA+ S+   NF+   R   +  P+  +   +  V   
Sbjct: 180 LKPKEVIAEFDQYLHDELDLQIEAANCSQLRRNFKKKGRENLLLIPEVHWDYSNSKVFTM 239

Query: 412 TYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKK 471
            + +G  +++    ++    +K  LA +G       +  D F HADMHPGNI + V  + 
Sbjct: 240 DWMEGIPIAQIDSVIEAGVDIKK-LARMGVEIFFMQVFEDGFFHADMHPGNIFISVNPQS 298

Query: 472 SSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNC 531
             Q          + LD G+   LS  D+  L + F A  +RD R  A+  L +  Q   
Sbjct: 299 FGQ---------YVALDFGIVGSLSDFDKNYLAQNFLAFFQRDYRRVAQ--LHIESQWVP 347

Query: 532 PNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTT 587
           PN +   E+++ A      P  D     +     +++L +  +R  V++   +  +  T 
Sbjct: 348 PNTRE--EQLEAAIRTVCEPYFDRPISEISLGNVLKKLFQISKRFHVSIQPQLVLLQKTL 405

Query: 588 LVLEGWQRKLDPGYNVMDTLQTLL 611
           L +EG  R+LDP  ++  T +  L
Sbjct: 406 LNVEGMGRELDPDLDLWSTAKPFL 429


>gi|238021911|ref|ZP_04602337.1| hypothetical protein GCWU000324_01815 [Kingella oralis ATCC 51147]
 gi|237866525|gb|EEP67567.1| hypothetical protein GCWU000324_01815 [Kingella oralis ATCC 51147]
          Length = 503

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 191/416 (45%), Gaps = 36/416 (8%)

Query: 211 QFRELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           QF    L V LR  LE+ GP F+K GQ  +TRPDL P D   +L++L  K P  + A ++
Sbjct: 44  QFAGEPLPVRLRLALESLGPIFVKLGQVLSTRPDLLPPDYAAELAKLQDKVPPFAAALSR 103

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329
           + IE + GR++ E++  F + PVAS SIAQVHRA L   + G+      VAVKV  P + 
Sbjct: 104 QQIEASLGRQIDELYAEFGDEPVASASIAQVHRARL---FSGE-----AVAVKVLRPNLL 155

Query: 330 ESIRRDFVIINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
             I +D  ++  AA  I  V    K L+  E V +F  ++  ++DL REAA+ S+    F
Sbjct: 156 GVIEQDLALMRFAATWIERVFADGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRQF 215

Query: 389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML 448
                +  P+  +      VL   +  G  +S  +  L+        LA  G       +
Sbjct: 216 ADSDKLIVPQVFFDYCSREVLTIEWMDGTPISD-IGSLKAQGIDLKQLARYGVEIFFTQV 274

Query: 449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFK 508
             + F HADMHPGNILV              +    I LD G+   L++ D+  L   F 
Sbjct: 275 FNNGFFHADMHPGNILV-------------AADGRYIALDFGIVGSLTEYDKRYLAINFL 321

Query: 509 AVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQ 563
           A   RD    A  T  +      P+ +A  E+++ A        +  P   +      + 
Sbjct: 322 AFFNRDYHRVA--TAHIESGWVPPDTRA--EDLEAAVRTVCEPIFNKPLSQISF-GMVLM 376

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           +L E  RR  V +   +  +  T L +EG  R+LDP  ++  T +  L+K  W  S
Sbjct: 377 RLFETSRRFNVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK--WMDS 430


>gi|339324622|ref|YP_004684315.1| ubiquinone biosynthesis protein UbiB [Cupriavidus necator N-1]
 gi|338164779|gb|AEI75834.1| ubiquinone biosynthesis protein UbiB [Cupriavidus necator N-1]
          Length = 525

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 180/399 (45%), Gaps = 35/399 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L   GP F+K+GQ  +TR DL P D+  +L++L  + P        K IERA GR L ++
Sbjct: 57  LTRLGPIFVKFGQVLSTRRDLMPADIADELAKLQDQVPPFDSVVAVKIIERALGRPLDQL 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F+ FE  PVAS SIAQVH A+L+    G       VAVKV  PG+   I  D  ++ ++A
Sbjct: 117 FETFEHQPVASASIAQVHFATLK----GGPCHGREVAVKVLRPGMLPVIDSDLALMRDMA 172

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +       K L+  E V +F  ++  ++DL  EAA+ S+   NF     +  P+  + 
Sbjct: 173 TWLERFWADGKRLKPREVVAEFDKYLHDELDLMIEAANASQLRRNFADTSLLLVPEVFWD 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIHA 456
                V V     G  +SR        E LK+A      LA  G       +  D F HA
Sbjct: 233 WCSSTVFVMERMHGIPISRT-------ESLKAAGVDMHQLAEEGVEIFFTQVFRDGFFHA 285

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNILV V  +         S    I LD G+   LS+ D+  L + F A  RRD  
Sbjct: 286 DMHPGNILVSVQPE---------SFGRYIALDFGIVGALSEFDKNYLAQNFIAFFRRDYH 336

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRH 572
             A     L  +     P   +EE++ A      P  D     +     + +L +  RR 
Sbjct: 337 RVA----LLHVESGWVPPDTRVEELESAVRACCEPYFDKPLKEISLGMVLMRLFQTSRRF 392

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            V +   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 393 NVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFL 431


>gi|333982623|ref|YP_004511833.1| ubiquinone biosynthesis protein ubiB [Methylomonas methanica MC09]
 gi|333806664|gb|AEF99333.1| ubiquinone biosynthesis protein ubiB [Methylomonas methanica MC09]
          Length = 525

 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 196/441 (44%), Gaps = 43/441 (9%)

Query: 185 LMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDL 244
           L+R +     FSP+       +S G + R        RTLE  GP ++K+GQ  +TR DL
Sbjct: 31  LLRPIRYLAYFSPTFWFRKPKESRGVRIR--------RTLEDLGPIYVKFGQTLSTRKDL 82

Query: 245 FPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRAS 304
            P D+ ++L +L  + P  S    +  IE   G+ +   FD F+  P+AS S+AQVH A 
Sbjct: 83  LPEDIAEELVKLQDRVPPFSADTARAIIEEQLGQSIEAAFDEFDPKPLASASVAQVHTAK 142

Query: 305 LRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVI-PAVKWLRLDESVQQ 363
           L+    G++     V VKV  P + + I  D  ++   A+++       + LR  E V +
Sbjct: 143 LK---SGEQ-----VIVKVLRPDIEDKIHSDVGLLYELARLAERFWSDARRLRAKEVVAE 194

Query: 364 FAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYV 423
           F   ++ ++DL REAA+ S    NF++   +  P+  +PL    VLV     G  V    
Sbjct: 195 FEKTILDELDLLREAANASAIRNNFKKSDSLYIPEIHWPLTRRKVLVMERIYGIPVGDIK 254

Query: 424 DELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH 483
               G+   K  LA  G       +  DNF HADMHPGNI V++  K             
Sbjct: 255 TLRAGNADFKK-LAERGVEIFFTQVFRDNFFHADMHPGNIFVQLPDK------------- 300

Query: 484 VIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDE 543
            + +D G+   LS TD+  L E F A    D R  A+  +    +     P   +EE + 
Sbjct: 301 YLAVDFGIVGSLSNTDQRYLAENFLAFFNHDYRRVAQMHI----ESGWVPPTTRVEEFEA 356

Query: 544 AF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLD 598
           A        +  P  D+      + +L +  RR  + V   +  +  T L +EG  R+L 
Sbjct: 357 AIRSVCEPIFEKPLKDISF-GLLLLRLFQTARRFDMVVQPQLVLLQKTLLNIEGLGRELY 415

Query: 599 PGYNVMDTLQTLLLKADWAKS 619
           P  ++  T +  L   +W K 
Sbjct: 416 PDLDLWQTAKPFL--ENWFKE 434


>gi|392425518|ref|YP_006466512.1| putative unusual protein kinase [Desulfosporosinus acidiphilus SJ4]
 gi|391355481|gb|AFM41180.1| putative unusual protein kinase [Desulfosporosinus acidiphilus SJ4]
          Length = 559

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 179/387 (46%), Gaps = 23/387 (5%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V + LE  GPA+IK GQ A+TR D+FP  +  +L +L    P  SF   ++ IE   G  
Sbjct: 60  VRQVLEELGPAYIKIGQIASTRADIFPEGIISELEKLQDSVPPFSFTEVRRIIENELGSP 119

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VI 338
           L EIF  F+E  VA+ SI QVH A L     G+K     VAVKV+ P + + I  D  ++
Sbjct: 120 LEEIFSMFDETAVAAASIGQVHLAQL---LSGEK-----VAVKVQRPNIIDLIETDLEIL 171

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
           ++LA      +  ++ L+L + V++FA  + +++D   EA +  +    F+    V  P 
Sbjct: 172 LDLATLAEHKMVRMERLQLRDVVEEFAKSLRNELDYTIEARNAEKIAKQFKDDPSVHIPG 231

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +      VL   Y +G  ++ Y DE+      +  +A     AL   +L++ F H D 
Sbjct: 232 IFWDYSTGKVLTMEYVEGIKLNLY-DEIDARGYQRKEIADHLVKALFHQVLIEGFFHGDP 290

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI +      S             FLD GM   LS+  + N      A+ R++  + 
Sbjct: 291 HPGNIFILEDGVLS-------------FLDFGMVGRLSQEMKYNFASMVIAMMRQNTESM 337

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +  LR+    +  N     ++VD+    +       +     +  LL+   RH++ +  
Sbjct: 338 IQAILRIGIIPDEVNMPLLTKDVDDLREKYMDVPMSRISLGAAIGDLLKVAYRHQIRIPA 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMD 605
           +   +    L+LEG   KLDP  ++MD
Sbjct: 398 DFTLLAKCLLLLEGIVEKLDPQLSIMD 424


>gi|113866477|ref|YP_724966.1| ubiquinone biosynthesis protein UbiB [Ralstonia eutropha H16]
 gi|113525253|emb|CAJ91598.1| predicted unusual protein kinase [Ralstonia eutropha H16]
          Length = 525

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 180/399 (45%), Gaps = 35/399 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L   GP F+K+GQ  +TR DL P D+  +L++L  + P        K IERA GR L ++
Sbjct: 57  LTRLGPIFVKFGQVLSTRRDLMPADIADELAKLQDQVPPFDSVVAVKIIERALGRPLDQL 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F+ FE  PVAS SIAQVH A+L+    G       VAVKV  PG+   I  D  ++ ++A
Sbjct: 117 FETFEHQPVASASIAQVHFATLK----GGPCHGREVAVKVLRPGMLPVIDSDLALMRDMA 172

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +       K L+  E V +F  ++  ++DL  EAA+ S+   NF     +  P+  + 
Sbjct: 173 TWLERFWADGKRLKPREVVAEFDKYLHDELDLMIEAANASQLRRNFADTSLLLVPEVFWD 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIHA 456
                V V     G  +SR        E LK+A      LA  G       +  D F HA
Sbjct: 233 WCSSTVFVMERMHGIPISRT-------ESLKAAGVDMHQLAEEGVEIFFTQVFRDGFFHA 285

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNILV V  +   +          I LD G+   LS+ D+  L + F A  RRD  
Sbjct: 286 DMHPGNILVSVQPETFGR---------YIALDFGIVGALSEFDKNYLAQNFIAFFRRDYH 336

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRH 572
             A     L  +     P   +EE++ A      P  D     +     + +L +  RR 
Sbjct: 337 RVA----LLHVESGWVPPDTRVEELESAVRACCEPYFDKPLKEISLGMVLMRLFQTSRRF 392

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            V +   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 393 NVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFL 431


>gi|407789686|ref|ZP_11136785.1| ubiquinone biosynthesis protein UbiB [Gallaecimonas xiamenensis
           3-C-1]
 gi|407205893|gb|EKE75856.1| ubiquinone biosynthesis protein UbiB [Gallaecimonas xiamenensis
           3-C-1]
          Length = 538

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 187/406 (46%), Gaps = 36/406 (8%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            +E  GP +IK+GQ  +TR DL P D+  +L++L  K P    A  +++IER+ G  L +
Sbjct: 57  AMEALGPVYIKFGQMLSTRRDLLPDDVALELTKLQDKVPPFDGALARRSIERSLGGPLEQ 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
            F  F+E P+AS SIAQVH A L       K   + V +KV  PG+ + +  D  +++  
Sbjct: 117 WFSDFDEKPLASASIAQVHTARL-------KDSGVEVVLKVIRPGIAKIMEADVRLMSTF 169

Query: 343 AKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A I++ V+P  + L+  E V+++   +  ++DL REAA+  +   NF     +  P+ VY
Sbjct: 170 AAIAAKVLPDGRRLKPKEVVREYQKTLFDELDLLREAANAIQLRRNFEGSDSLYVPE-VY 228

Query: 402 P-LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           P L    +LV     G  V+  +D L+ +      LA  G       +  D+F HADMHP
Sbjct: 229 PDLCRKRLLVMERIYGIPVAD-IDSLRANGTNLERLAEKGVEVFFTQVFRDSFFHADMHP 287

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V     ++         P  I +D G+   L+K D+  L E F A   RD R  AE
Sbjct: 288 GNIFVSYDNPEN---------PKYIGIDCGIVGTLAKEDKRYLAENFVAFFNRDYRKVAE 338

Query: 521 CTLRLSKQQNCPNPKAFIEEVDE-AFAFWGTPEGDLVHP------AECMQQLLEKVRRHR 573
             +        P    F   VDE   A     E     P       + +  L    RR  
Sbjct: 339 LHV---DSGWVP----FDTSVDEFEVAIRTVCEPIFEKPLAEISFGQVLVNLFNTARRFN 391

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           + V   +  +  T L +EG  R+L P  ++  T +  L   DW K 
Sbjct: 392 MEVQPQLVLLQKTLLYIEGLGRQLYPQLDLWKTAKPFL--EDWLKE 435


>gi|333897250|ref|YP_004471124.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|333112515|gb|AEF17452.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 556

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 190/411 (46%), Gaps = 41/411 (9%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           TLE  GP F+K GQ  +TRPDL P D+  +LS+L    P   F   ++ +E   G ++S 
Sbjct: 62  TLEELGPTFVKMGQLLSTRPDLLPHDVINELSKLQDDVPPVEFDTMRQIVEDELGDKISN 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F++ P+AS SI QV+RA  R    G       V VKV+ PGV E I  D +I+   
Sbjct: 122 LFLTFDKEPIASASIGQVYRAITR---EGND-----VVVKVQRPGVYEKITADIIILKTI 173

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           AKI +       +   + V + +  +++++D   E  +  +F  NF     V  PK  + 
Sbjct: 174 AKILNERLTDSPVDFLDVVNELSESLLNELDYTLEGNNADKFRENFINEPYVYIPKIYWE 233

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIHA 456
                VL   Y  G  V       +  E+L+ +      +A+ G  ++   + V  F H 
Sbjct: 234 YTTKKVLTMEYIDGISV-------KNKEKLRDSGFDLKRIAYNGAMSIFMQIFVYGFFHG 286

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           D HPGNIL+R   K S             ++D G+   + +++R  +VE FKA    D  
Sbjct: 287 DPHPGNILIRRDGKLS-------------YIDFGIVGYIDRSNREMIVELFKAFVDNDTD 333

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
                   +   ++  N +    ++    + F+ TP  + ++  +  +++   + ++++ 
Sbjct: 334 EVVSILTDMDAIRDGVNIRHLKYDLSGIISYFYNTPLKN-ININDSAKKITSIIYKYKLI 392

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA-----DWAKSLS 621
           +      ++ +   +EG  ++LDP +++ D  +  + K      ++AK+LS
Sbjct: 393 MPAEFTLLLKSLATIEGVGKELDPDFSISDIAKDFVKKIYINNFNFAKTLS 443


>gi|73540140|ref|YP_294660.1| ubiquinone biosynthesis protein UbiB [Ralstonia eutropha JMP134]
 gi|72117553|gb|AAZ59816.1| 2-octaprenylphenol hydroxylase [Ralstonia eutropha JMP134]
          Length = 525

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 181/399 (45%), Gaps = 35/399 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L   GP F+K+GQ  +TR DL P D+  +L+ L  + P    A   K IER+ GR L+++
Sbjct: 57  LTKLGPIFVKFGQVLSTRRDLMPPDIADELALLQDQVPPFDSAVAVKIIERSLGRTLADL 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F+ FE  PVAS SIAQVH A+L+    G       VAVKV  PG+   I  D  ++ +LA
Sbjct: 117 FETFEHQPVASASIAQVHFATLK----GGPNHGREVAVKVLRPGMLPVIDSDLALMRDLA 172

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +       K L+  E V +F  ++  ++DL  EAA+ S+   NF     +  P+  + 
Sbjct: 173 TWLERFWADGKRLKPREVVAEFDKYLHDELDLMIEAANASQLRRNFADTNLLLVPEVFWD 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIHA 456
                V V     G  +SR        E LK+A      LA  G       +  D F HA
Sbjct: 233 WCSSTVFVMERMHGIPISRT-------ESLKAAGVDMHQLAEEGVEIFFTQVFRDGFFHA 285

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNILV V  +   +          I LD G+   LS+ D+  L + F A  RRD  
Sbjct: 286 DMHPGNILVSVQPETFGR---------YIALDFGIVGALSEFDKNYLAQNFIAFFRRDYH 336

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRH 572
             A     L  +     P   +EE++ A      P  D     +     + +L +  RR 
Sbjct: 337 RVA----LLHVESGWVPPDTRVEELESAVRACCEPYFDKPLKEISLGMVLMRLFQTSRRF 392

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            V +   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 393 NVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFL 431


>gi|308051254|ref|YP_003914820.1| 2-octaprenylphenol hydroxylase [Ferrimonas balearica DSM 9799]
 gi|307633444|gb|ADN77746.1| 2-octaprenylphenol hydroxylase [Ferrimonas balearica DSM 9799]
          Length = 544

 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 171/388 (44%), Gaps = 17/388 (4%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP +IK+GQ  +TR DL P +L   L+ L  + P  S       IE A G+ +  +
Sbjct: 61  LQALGPVYIKFGQMLSTRRDLLPDELADALALLQDQVPPFSPDQATARIEAALGQPIDAL 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           FD F   P+AS S+AQVH A  R +  G +     V +KV  PG+   IR D  ++   A
Sbjct: 121 FDDFNPTPLASASVAQVHTA--RLKSNGDE-----VVIKVVRPGIESVIRADLALMAQVA 173

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
           ++ +  P  + L   E V+ +   +++++DL REA +  R   NF     +  P+     
Sbjct: 174 RLLAASPTGQRLHPVEVVEDYRRTILAELDLTREADNAQRLRANFEGSDALYIPRVYEQF 233

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
            HP ++V     G  V+  +  L         LA  G       +  DNF HADMHPGNI
Sbjct: 234 SHPNLMVMERIYGIPVTD-IAALHAQGTDMKKLAERGVEVFFTQVFRDNFFHADMHPGNI 292

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
            V          R     P  I +D G+   LS+ D+ ++ E F A   +D R  A+  L
Sbjct: 293 FV---------SREHPDDPMYIGIDCGIVGHLSEQDKRDMAEIFLAFFNQDYRRLAQLFL 343

Query: 524 RLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTV 583
           +        +P AF   + + FA         +   + +  L        + V   +  +
Sbjct: 344 QTGWVDAKADPVAFEHALKQVFAPLENKPLSEISFGQLLVDLFRTAHEFGMVVKPQLVLL 403

Query: 584 MVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             T L +EG  R+L P  ++ DT +  L
Sbjct: 404 EKTLLYIEGLGRQLYPQLDLWDTAKPFL 431


>gi|88813050|ref|ZP_01128292.1| 2-polyprenylphenol 6-hydroxylase [Nitrococcus mobilis Nb-231]
 gi|88789683|gb|EAR20808.1| 2-polyprenylphenol 6-hydroxylase [Nitrococcus mobilis Nb-231]
          Length = 555

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 183/388 (47%), Gaps = 25/388 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           TLE  GP F+K+GQ  +TR DL P+D+ ++LS L  + P       +  +ERA+ + L  
Sbjct: 62  TLEDLGPIFVKFGQILSTRRDLLPQDIAQELSYLQDRVPSFPGEVARSIVERAYNQPLDA 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
           +FD FE  P+AS SIAQVH A L+    G++     V VKV  PG+   I RD  ++  +
Sbjct: 122 VFDEFEAEPLASASIAQVHAARLK---DGRE-----VVVKVVRPGIERVISRDLQLLYTI 173

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+      P    LR  E + +F   +  ++DL REAA+ S+   NF+    +  P   +
Sbjct: 174 ASLAQRYWPQAYRLRPVEVIHEFDKTIHDELDLMREAANASQLRRNFKDSNLIYVPDIYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
           P     V+V    +G  +S  +D+L+ +     ALA  G       +  D+F HADMHPG
Sbjct: 234 PATRTNVMVMERIRGIPISD-IDQLKANGINLKALAERGVEIFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           N+ +     +         +P  + +D G+   L+  D   L E F A   R+ R  AE 
Sbjct: 293 NVFIDPNHTE---------EPMYLAVDFGIIGTLNPIDHRYLAENFLAFFNRNYRRVAEL 343

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A I  V E    +  P G++   A  + +L +  RR  + +  
Sbjct: 344 HIESGWVPTGTRVDEFEAAIRTVCE--PIFQRPLGEISFGA-LLLRLFQTGRRFNMEIQP 400

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
            +  +  T L +EG  R+L P  ++  T
Sbjct: 401 QLILLQKTLLNIEGMGRQLYPELDLWTT 428


>gi|217969153|ref|YP_002354387.1| ubiquinone biosynthesis protein UbiB [Thauera sp. MZ1T]
 gi|217506480|gb|ACK53491.1| 2-polyprenylphenol 6-hydroxylase [Thauera sp. MZ1T]
          Length = 509

 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 188/414 (45%), Gaps = 41/414 (9%)

Query: 204 FADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEH 263
           F++S G + R+         LE+ GP F+K+GQ  +TR DL P DL  +L+ L  + P  
Sbjct: 44  FSESRGARLRQ--------ALESLGPIFVKFGQMLSTRRDLLPPDLADELALLQDRVPPF 95

Query: 264 SFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKV 323
                 + +E  +GR + E+FD FE  PVAS S+AQVH A    R P        VAVKV
Sbjct: 96  PTEQALEVLEGFYGRPIDEVFDDFERTPVASASVAQVHFA----RLP----DGTDVAVKV 147

Query: 324 RHPGVGESIRRDFVIINLAA-KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLS 382
             PG+   I  D  ++ +AA  +  + P  + L+  E V +F+ ++  ++DL REAA+ S
Sbjct: 148 LRPGIERVIEHDLALLEVAAVLLEKIWPEGRRLKPREVVAEFSKYLHDELDLMREAANCS 207

Query: 383 RFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTH 442
           +   NF     +  P+  +      V+V    +G  +S+    L     LK AL+  G  
Sbjct: 208 QLRRNFTDSSLLIVPEVYWDWCGSKVMVMERMRGVPISQTPALLAQGTDLK-ALSRAGVE 266

Query: 443 ALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVN 502
                +  D F HADMHPGNI V                   I LD G+   L++ D+  
Sbjct: 267 IFFTQVFRDGFFHADMHPGNIFV-------------HQDGRYIALDFGIMGTLNEVDKNY 313

Query: 503 LVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVH 557
           L   F A  +RD R  A   +    +      K  ++E + A        +  P  D+  
Sbjct: 314 LATNFLAFFKRDYRRVALAHI----EAGWVPAKTRVDEFEAAIRTVCEPIFDKPLKDISF 369

Query: 558 PAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             + + +L +  RR  + V   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 370 -GKTLLRLFQTARRFEMEVQPQLVLLQKTLLNIEGLGRQLDPELDLWKTAKPFL 422


>gi|299067981|emb|CBJ39195.1| 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway
           [Ralstonia solanacearum CMR15]
          Length = 525

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 124/395 (31%), Positives = 184/395 (46%), Gaps = 25/395 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+  +L++L  + P          +ER+ G+ LS 
Sbjct: 56  ALEQLGPIFVKFGQVLSTRRDLLPPDVADELAKLQDRVPPFDPKIAAAIVERSLGKPLSA 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +F  F+  PVAS SIAQVH A+LR    G       VAVKV  PG+   I  D  ++ ++
Sbjct: 116 LFHRFDHHPVASASIAQVHFATLR----GGPDDGREVAVKVLRPGMLPVIDSDLALMRDV 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF +   +  P+  +
Sbjct: 172 ATWMEKLWADGKRLKPREVVAEFDKYLHDELDLMREAANASQLRRNFAKSDLLLVPEVFW 231

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 V V     G  VS + DEL+        LA  G       +  D F HADMHPG
Sbjct: 232 DWCTSEVFVMERMHGVRVS-HADELREAGVDMHKLARDGVEIFFTQVFRDGFFHADMHPG 290

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV VA +         S    I LD G+   LS+ D+  L + F A  +RD    A  
Sbjct: 291 NILVSVAPE---------SLGRYIALDFGIVGALSEFDKNYLAQNFLAFFQRDYHRVA-- 339

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
              L  +         +EE++ A       ++  P G+ +     + +L +  RR  V V
Sbjct: 340 --LLHVESGWAPEDTRVEELEGAIRACCEPYFDRPLGE-ISLGLVLMRLFQTSRRFNVEV 396

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 397 QPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAKPFL 431


>gi|430836491|ref|ZP_19454470.1| ubiquinone biosynthesis protein [Enterococcus faecium E0680]
 gi|431506777|ref|ZP_19515603.1| ubiquinone biosynthesis protein [Enterococcus faecium E1634]
 gi|430488291|gb|ELA64973.1| ubiquinone biosynthesis protein [Enterococcus faecium E0680]
 gi|430587164|gb|ELB25397.1| ubiquinone biosynthesis protein [Enterococcus faecium E1634]
          Length = 581

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 182/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 35  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 94

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 95  LSDIFDDFSKSPFASASMGQAHRAKLK---NGDS-----VVVKIQHPNIAEEIRLDLQLF 146

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 147 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 206

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++   G E         +LK  +A +     +K +  
Sbjct: 207 YDAFCSKKVIVMEEMSGKNLNHLMNAENGTETFITGIQNKQLKQEVAKLLVENFMKQVFD 266

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V     Q ++SQK             FR+         P+ + +
Sbjct: 267 DGFFHADPHPGNLLFHVLTKEEQTRASQKTETVHEKEFGSFTFRASTSTEDPVAPYTVNY 326

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 327 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 386

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 387 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 445


>gi|430850818|ref|ZP_19468575.1| ubiquinone biosynthesis protein [Enterococcus faecium E1185]
 gi|431441108|ref|ZP_19513323.1| ubiquinone biosynthesis protein [Enterococcus faecium E1630]
 gi|431760193|ref|ZP_19548795.1| ubiquinone biosynthesis protein [Enterococcus faecium E3346]
 gi|430535177|gb|ELA75600.1| ubiquinone biosynthesis protein [Enterococcus faecium E1185]
 gi|430586464|gb|ELB24716.1| ubiquinone biosynthesis protein [Enterococcus faecium E1630]
 gi|430624002|gb|ELB60653.1| ubiquinone biosynthesis protein [Enterococcus faecium E3346]
          Length = 581

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 182/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 35  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 94

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 95  LSDIFDDFSKSPFASASMGQAHRAKLK---NGDS-----VVVKIQHPNIAEEIRLDLQLF 146

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 147 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 206

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++   G E         +LK  +A +     +K +  
Sbjct: 207 YDAFCSKKVIVMEEMSGKNLNHLMNAKNGTETFITGIQNKQLKQEVAKLLVENFMKQVFD 266

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V     Q ++SQK             FR+         P+ + +
Sbjct: 267 DGFFHADPHPGNLLFHVLTKEEQTRASQKTETVHEKEFGSFTFRASTSTEDPVAPYTVNY 326

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 327 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGVFDESRFHQELTSFLE 386

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 387 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 445


>gi|90022347|ref|YP_528174.1| 2-octaprenylphenol hydroxylase [Saccharophagus degradans 2-40]
 gi|89951947|gb|ABD81962.1| 2-octaprenylphenol hydroxylase [Saccharophagus degradans 2-40]
          Length = 534

 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 186/401 (46%), Gaps = 27/401 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           +LE  GP FIK+GQ  +TRPDL P D+ ++L+ L  +    S    K+ +E+A G   + 
Sbjct: 56  SLEELGPIFIKFGQLLSTRPDLIPDDIIEELNYLQDRVAPFSNEEFKRIVEQALGNNTNA 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F E P+AS S+AQVH A+L   + G+      V VKV  P + + I++D  ++ L 
Sbjct: 116 LFKEFSEKPLASASVAQVHTATL---HTGED-----VVVKVVRPNIEKIIQKDVALLELL 167

Query: 343 AK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ I  + P  +  +L E V  +   +  ++DL REAA+ S+   NF     +  P   +
Sbjct: 168 ARTIEKLSPEGRRFKLSEVVADYKDTIFDELDLKREAANASQLRRNFEGSPLLYVPAVHW 227

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 V+V     G  V+  ++++         LA  G     K +   NF HADMHPG
Sbjct: 228 QYCTNKVMVMERIYGIPVTD-MEKINAQSTNLKLLAERGVEVFFKQVFEHNFFHADMHPG 286

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           N+ V  A  ++         P  + +D+ +   L+K D+  L     A+ RRD R  AE 
Sbjct: 287 NVFVSPANPQN---------PSYMAVDMAIIGSLTKEDQYYLARNLLAMFRRDYRQVAEL 337

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +    +    ++ I  V E    +  P  D+    E +  L    RR+ + V  
Sbjct: 338 HVMSGWVPANTSISGFESAIRTVCE--PIFERPLKDISF-GESLVNLFRTARRYNMPVQP 394

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
            +  +  T L +EG  R+L P  N+ DT    L K  W K 
Sbjct: 395 QLVLLQKTLLNIEGLGRQLYPDLNLWDTAHPYLEK--WLKE 433


>gi|431380397|ref|ZP_19510778.1| ubiquinone biosynthesis protein [Enterococcus faecium E1627]
 gi|430582265|gb|ELB20692.1| ubiquinone biosynthesis protein [Enterococcus faecium E1627]
          Length = 581

 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 182/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 35  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 94

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 95  LSDIFDDFSKSPFASASMGQAHRAKLK---NGDS-----VVVKIQHPNIAEEIRLDLQLF 146

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 147 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 206

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++   G E         +LK  +A +     +K +  
Sbjct: 207 YDAFCSKKVIVMEEMSGKNLNHLMNAENGTETFITGIQNKQLKQEVAKLLVENFMKQVFD 266

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V     Q ++SQK             FR+         P+ + +
Sbjct: 267 DGFFHADPHPGNLLFHVLTKEEQTRASQKTETVHEKEFGSFTFRASTSTEDPVAPYTVNY 326

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 327 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 386

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 387 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 445


>gi|392404116|ref|YP_006440728.1| 2-octaprenylphenol hydroxylase [Turneriella parva DSM 21527]
 gi|390612070|gb|AFM13222.1| 2-octaprenylphenol hydroxylase [Turneriella parva DSM 21527]
          Length = 559

 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 174/395 (44%), Gaps = 28/395 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           RTLE  GP ++K GQ  + R D+ P  +  +L +L S+ P   ++  K  IE  F   + 
Sbjct: 69  RTLERLGPTYVKLGQILSLRDDMLPERITVELRKLQSQVPPIPYSEAKGVIEAEFNMPIR 128

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
            IF  F E PVAS S+AQ H A LR    GQK     V VKV+ PG+   I  D  ++  
Sbjct: 129 HIFAEFSEVPVASASLAQAHIAKLR---SGQK-----VVVKVQRPGITRLISDDINVMRR 180

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
            A I   IP ++  R    V++FA + M ++D A+E  H   F  NF  W D+ FPK  +
Sbjct: 181 LAFIMERIPKIRDYRPVHFVEEFAKYTMRELDFAQEGKHADMFRENFAEWDDIMFPKIYW 240

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERL---KSALAHIGTHALLKMLLVDNFIHADM 458
                 VL   +  G       D+ +  +RL      LA  G  A+LKML +D F H D 
Sbjct: 241 DYTSRRVLTMEFVDGIK----PDDREKLKRLGINGPKLAARGAQAVLKMLYIDGFFHGDP 296

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGN+ + V + K            +  +D+GM    +   R N+  ++  +  R+   A
Sbjct: 297 HPGNMFI-VDRNK------------ICLIDLGMIGSFTPETRNNMFLYYYFMVIREFDHA 343

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
               ++L++     +   F  E+ E    W             +   +    +HR+   G
Sbjct: 344 TSYLVKLTEPGRRADVAGFRLELAEQIKRWSGAGFKEYSLGRLIFDTMNIGAKHRLYFHG 403

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           ++       + +E     LDP  ++    + ++ K
Sbjct: 404 DLVLSSKCIITIEAVGAILDPKMDLAKVSRPMMEK 438


>gi|344942227|ref|ZP_08781515.1| ubiquinone biosynthesis protein ubiB [Methylobacter tundripaludum
           SV96]
 gi|344263419|gb|EGW23690.1| ubiquinone biosynthesis protein ubiB [Methylobacter tundripaludum
           SV96]
          Length = 516

 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 201/448 (44%), Gaps = 43/448 (9%)

Query: 174 VLYSLVECVIL--LMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAF 231
           V + L E V+   L R +    +FSP   +   +DS G + R        R LE  GP +
Sbjct: 18  VFHGLDEIVLKTHLFRPVRYLAVFSPHFWLRNSSDSRGARIR--------RALEDLGPIY 69

Query: 232 IKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAP 291
           +K+GQ  +TR DL P D+  +L +L  + P  +    +  IE+  G  +S+ F  F+  P
Sbjct: 70  VKFGQALSTRRDLLPDDIADELIKLQDRVPPFANELARSIIEKELGMSISDAFAEFDAEP 129

Query: 292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPA 351
           +AS S+AQVH A L   + G+      V VKV  P +   IR D  ++   A+ +    A
Sbjct: 130 LASASVAQVHTAVL---HSGES-----VVVKVLRPDIEGRIRSDIGLLYELARFAERFWA 181

Query: 352 -VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLV 410
             + LR  + V +F    + ++DL REAA+ ++   NF     +  P+  +PL    VLV
Sbjct: 182 DARRLRPMDVVAEFERTTLDELDLVREAANAAKLRRNFENSDVIYIPEIHWPLTRRKVLV 241

Query: 411 ETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQK 470
                G  V   +D+L+        LA  G       +  DNF HADMHPGNI V +  K
Sbjct: 242 MERIHGIPVGN-IDQLREGGANFKLLAERGVEIFFTQVFRDNFFHADMHPGNIFVDLPAK 300

Query: 471 KSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQN 530
                         I +D G+   LS +D+  L E F A   RD R  AE  +    +  
Sbjct: 301 -------------YIAVDFGIVGTLSLSDQHYLAENFLAFFNRDYRKVAEMHV----ESG 343

Query: 531 CPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMV 585
             +    IEE + A        +  P  D+    + + +L +  RR  ++V   +  +  
Sbjct: 344 WVSESTRIEEFESAIRSVCEPIFEKPLKDISF-GQLLLRLFQTARRFDMHVQPQLVLLQK 402

Query: 586 TTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           T L +EG  R+L P  ++  T +  L K
Sbjct: 403 TLLNIEGLGRQLYPDLDLWQTAKPFLEK 430


>gi|304317002|ref|YP_003852147.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778504|gb|ADL69063.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 557

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 180/392 (45%), Gaps = 24/392 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           TLE  GP F+K GQ  +TRPDL P D+  +LS+L    P   F   KK IE      +S 
Sbjct: 63  TLEELGPTFVKMGQLLSTRPDLLPHDIIVELSKLQDNVPPIEFNTIKKIIEEELKDEVSN 122

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+E P+AS SI QV+RA  +  Y         V VKV+ PG+ + I  D +I+   
Sbjct: 123 LFVSFDEKPIASASIGQVYRARTKEGYD--------VVVKVQRPGIYDKINGDIIILKTI 174

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           AKI +       +   + V + +  +++++D   E  +  +F  NF     V  PK  + 
Sbjct: 175 AKILNERLTDSPVDFVDIVNELSESLLNELDYTLEGNNADKFRENFINETYVYIPKIYWE 234

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VL   Y  G  V      ++    LK  +A+ G  ++L  +    F H D HPGN
Sbjct: 235 YTTKKVLTMEYIDGTSVKNKHKLIENGFDLKK-IAYNGAMSILMQIFEFGFFHGDPHPGN 293

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           IL++   K S             ++D G+   + +++R  +VE FKA    D        
Sbjct: 294 ILIKSDGKLS-------------YIDFGIVGYIDRSNRQMIVELFKAFVDNDTDEVISIL 340

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVC 581
             +   ++  N +    ++    + F+ TP  + ++  + ++++   + ++++ +     
Sbjct: 341 TDMDAIRDETNIRHLKYDLSGMISYFYNTPLKN-ININDSVKKITSLIYKYKLMMPAEFT 399

Query: 582 TVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            ++ +   +EG  ++LDP +++ D  +  + K
Sbjct: 400 LLLKSLATIEGVGKELDPDFSISDIARDFIRK 431


>gi|413963688|ref|ZP_11402915.1| ubiquinone biosynthesis protein UbiB [Burkholderia sp. SJ98]
 gi|413929520|gb|EKS68808.1| ubiquinone biosynthesis protein UbiB [Burkholderia sp. SJ98]
          Length = 523

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 183/394 (46%), Gaps = 23/394 (5%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP F+K+GQ  +TR DL P D+  +L++L  + P    A     IE++ G  + E
Sbjct: 55  ALESLGPIFVKFGQVLSTRRDLLPVDVADELAKLQDQVPPFDSAVAVSIIEKSLGAPIDE 114

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +FD FE  PVAS SIAQVH A +R      K     VAVKV  PG+   I  D  ++ ++
Sbjct: 115 LFDDFERVPVASASIAQVHFAKIRNGEHAGK----AVAVKVLRPGMLPVIDSDLALLRDI 170

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A     +    + L+  E V +F  ++  ++DL REAA+ S+   NF+    +  P+  +
Sbjct: 171 ATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFQGLDLLLVPEMYW 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
            L  P VLV     G  +S+ V+ L+        LA  G       +  D F HADMHPG
Sbjct: 231 DLSAPTVLVMERMVGVPISQ-VETLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V +      +          I LD G+   LS  D+  L + F A  +RD    A  
Sbjct: 290 NIQVSLDPATFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA-- 338

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVD 577
           TL L      P+ +  +EE++ A      P  D     +   + + +L    RR  V + 
Sbjct: 339 TLHLESGWVPPSTR--VEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQ 396

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 397 PQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|350545465|ref|ZP_08914947.1| Ubiquinone biosynthesis monooxygenase UbiB [Candidatus Burkholderia
           kirkii UZHbot1]
 gi|350526751|emb|CCD39634.1| Ubiquinone biosynthesis monooxygenase UbiB [Candidatus Burkholderia
           kirkii UZHbot1]
          Length = 524

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 186/394 (47%), Gaps = 25/394 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL P D+  +L++L  + P    A     IE + G  + E+
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLPVDIADELAKLQDRVPPFDSAVAVSIIETSLGTPIDEL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRF-RYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           FD FE  PVAS SIAQVH A +R  ++ G+      VAVKVR P +   I  D  ++ ++
Sbjct: 116 FDEFERVPVASASIAQVHFAKIRNGKHAGE-----AVAVKVRRPAMLPVIDSDLALLCDI 170

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A     +    + L+  E V +F  ++  ++DL REAA+ S+   NF+    +  P+  +
Sbjct: 171 ATWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANASQLRRNFQGLGLLLVPEMYW 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
            +  P+VLV     G  +S+ VD L+        LA          +  D F HADMHPG
Sbjct: 231 DMSAPSVLVMERMVGVPISQ-VDTLRAAGVDIPKLARESVEIFFTQVFRDGFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V +      +          I LD G+   LS  D+  L + F A  +RD    A  
Sbjct: 290 NIQVSLDPATFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA-- 338

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVD 577
           TL L      P+ +  +EE++ +      P  D     +   + + +L    RR  V + 
Sbjct: 339 TLHLESGWVPPSTR--VEELESSIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQ 396

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             +  +  T L +EG+ R LDP  ++  T +  L
Sbjct: 397 PQLVLLQKTMLNVEGFGRSLDPELDLWKTAKPYL 430


>gi|264676932|ref|YP_003276838.1| 2-polyprenylphenol 6-hydroxylase [Comamonas testosteroni CNB-2]
 gi|262207444|gb|ACY31542.1| 2-polyprenylphenol 6-hydroxylase [Comamonas testosteroni CNB-2]
          Length = 522

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 187/401 (46%), Gaps = 35/401 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+ ++L++L  + P         TIER+F + L +I
Sbjct: 57  LEELGPIFVKFGQVLSTRSDLMPPDVAEELAKLQDRVPPFDSQIAVDTIERSFRKPLEQI 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  FE  PVAS SIAQVH A +R +   +      VAVKV  PG+   I +D  ++++ A
Sbjct: 117 FISFEREPVASASIAQVHFARVRDKSGVEH----DVAVKVLRPGMKSVIDKDLALMHMMA 172

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  +    K L+  E V +F  ++  ++DL REA++ ++   N      V  P+  + 
Sbjct: 173 SWLEKLSHDGKRLKPKEVVAEFDNYLHDELDLIREASNAAQLRRNMEGLDLVLIPEIHWD 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIHA 456
             H  V+V    +G  +S+        ERL+ A      LA  G       +  D F HA
Sbjct: 233 YCHTDVMVMERMKGVPISQV-------ERLREAGVDIPKLARDGVTIFFTQVFRDGFFHA 285

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNI+V +      +          I LD G+   L++ D+  L + F A  RRD +
Sbjct: 286 DMHPGNIMVSLEPDTFGR---------YISLDFGIVGTLTEFDKEYLAQNFLAFFRRDYK 336

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRH 572
             A     L  +         +EE++ A      P  D     +     + +L +  RR 
Sbjct: 337 RVAA----LHVESGWVPATTRVEELEAAIRAVCEPYFDRPLAEISLGMVLMRLFQTSRRF 392

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +V +   +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 393 QVEIQPQLVLLQKTLLNIEGLGRQLDPNLDLWSTAKPFLEK 433


>gi|299531494|ref|ZP_07044900.1| putative ubiquinone biosynthesis protein UbiB [Comamonas
           testosteroni S44]
 gi|298720457|gb|EFI61408.1| putative ubiquinone biosynthesis protein UbiB [Comamonas
           testosteroni S44]
          Length = 522

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 187/401 (46%), Gaps = 35/401 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+ ++L++L  + P         TIER+F + L +I
Sbjct: 57  LEELGPIFVKFGQVLSTRSDLMPPDVAEELAKLQDRVPPFDSQIAVDTIERSFRKPLEQI 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  FE  PVAS SIAQVH A +R +   +      VAVKV  PG+   I +D  ++++ A
Sbjct: 117 FISFEREPVASASIAQVHFARVRDKAGVEH----DVAVKVLRPGMKSVIDKDLALMHMMA 172

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  +    K L+  E V +F  ++  ++DL REA++ ++   N      V  P+  + 
Sbjct: 173 SWLEKLSHDGKRLKPKEVVAEFDNYLHDELDLIREASNAAQLRRNMEGLDLVLIPEIHWD 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIHA 456
             H  V+V    +G  +S+        ERL+ A      LA  G       +  D F HA
Sbjct: 233 YCHTDVMVMERMKGVPISQV-------ERLREAGVDIPKLARDGVTIFFTQVFRDGFFHA 285

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNI+V +      +          I LD G+   L++ D+  L + F A  RRD +
Sbjct: 286 DMHPGNIMVSLEPDTFGR---------YISLDFGIVGTLTEFDKEYLAQNFLAFFRRDYK 336

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRH 572
             A     L  +         +EE++ A      P  D     +     + +L +  RR 
Sbjct: 337 RVAA----LHVESGWVPATTRVEELEAAIRAVCEPYFDRPLAEISLGMVLMRLFQTSRRF 392

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +V +   +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 393 QVEIQPQLVLLQKTLLNIEGLGRQLDPNLDLWSTAKPFLEK 433


>gi|221068937|ref|ZP_03545042.1| 2-polyprenylphenol 6-hydroxylase [Comamonas testosteroni KF-1]
 gi|220713960|gb|EED69328.1| 2-polyprenylphenol 6-hydroxylase [Comamonas testosteroni KF-1]
          Length = 522

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 187/401 (46%), Gaps = 35/401 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+ ++L++L  + P         TIER+F + L +I
Sbjct: 57  LEELGPIFVKFGQVLSTRSDLMPPDVAEELAKLQDRVPPFDSQIAVDTIERSFRKPLEQI 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  FE  PVAS SIAQVH A +R +   +      VAVKV  PG+   I +D  ++++ A
Sbjct: 117 FISFERQPVASASIAQVHFARIRDKDGIEH----DVAVKVLRPGMKSVIDKDLALMHMMA 172

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  +    K L+  E V +F  ++  ++DL REA++ ++   N      V  P+  + 
Sbjct: 173 SWLEKLSHDGKRLKPKEVVAEFDNYLHDELDLIREASNAAQLRRNMEGLDLVLIPEIHWD 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIHA 456
             H  V+V    +G  +S+        ERL+ A      LA  G       +  D F HA
Sbjct: 233 YCHTDVMVMERMKGVPISQV-------ERLREAGVDIPKLARDGVTIFFTQVFRDGFFHA 285

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNI+V +      +          I LD G+   L++ D+  L + F A  RRD +
Sbjct: 286 DMHPGNIMVSLEPDTFGR---------YISLDFGIVGTLTEFDKEYLAQNFLAFFRRDYK 336

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRH 572
             A     L  +         +EE++ A      P  D     +     + +L +  RR 
Sbjct: 337 RVAA----LHVESGWVPATTRVEELEAAIRAVCEPYFDRPLAEISLGMVLMRLFQTSRRF 392

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +V +   +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 393 QVEIQPQLVLLQKTLLNIEGLGRQLDPNLDLWSTAKPFLEK 433


>gi|260220360|emb|CBA27822.1| Probable ubiquinone biosynthesis protein ubiB [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 521

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 183/393 (46%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+  +L++L  + P         TIERA G+ +SEI
Sbjct: 57  LERLGPIFVKFGQVLSTRRDLLPLDIANELAKLQDRVPPFDSEVAVATIERALGKPVSEI 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  FE  PVAS SIAQVH A L+ R   ++     VAVKV  P +   I +D  ++ + A
Sbjct: 117 FVSFERTPVASASIAQVHFAVLKDRSGRER----EVAVKVLRPNMLGVIDKDLALMRMMA 172

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  +    K L+  E V +F  ++  ++DL REA+  ++   N      V  P+ ++ 
Sbjct: 173 GWVEGLSADGKRLKPREVVAEFDKYLHDELDLVREASSAAQLRRNMEGLDLVLIPEMLWD 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VLV     G  +S+ +D+L+        LA  G       +  D F HADMHPGN
Sbjct: 233 YCTTEVLVMERMHGVPISQ-IDKLREAGVDVPKLARDGVTLFFTQVFRDGFFHADMHPGN 291

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +A +   +          I LD G+   L++ D+  L + F A  RRD +  AE  
Sbjct: 292 IQVSLAPETFGR---------YISLDFGIVGTLTEVDKEYLAQNFVAFFRRDYKRVAE-- 340

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
             L  +         ++E++ A      P  D     +     + +L +  RR  V +  
Sbjct: 341 --LHIESGWVPAATRVDELEAAVRAVCEPYFDRPLKEISLGMVLMRLFQTSRRFHVEIQP 398

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 399 QLVLLQKTLLNIEGLGRDLDPDLDLWATAKPFL 431


>gi|425058606|ref|ZP_18461984.1| ABC1 family protein [Enterococcus faecium 504]
 gi|403038010|gb|EJY49250.1| ABC1 family protein [Enterococcus faecium 504]
          Length = 583

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 180/419 (42%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 37  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 96

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 97  LSDIFDDFSKSPFASASMGQAHRAKLK---NGDS-----VVVKIQHPNIAEEIRLDLQLF 148

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 149 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 208

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++   G E         +LK  +A +     +K +  
Sbjct: 209 YDAFCSKKVIVMEEMSGKNLNHLMNAKNGTETFITGIQNKQLKQEVAKLLVENFMKQVFD 268

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRSKPH---------VIF 486
           D F HAD HPGN+L  V     Q ++SQK             FR+            V +
Sbjct: 269 DGFFHADPHPGNLLFHVLTKEEQTRASQKTETVHEKEFGSFTFRASTSTEDPVALYTVNY 328

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 329 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGVFDESRFHQELTSFLE 388

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 389 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 447


>gi|325266139|ref|ZP_08132823.1| 2-polyprenylphenol 6-hydroxylase [Kingella denitrificans ATCC
           33394]
 gi|324982369|gb|EGC17997.1| 2-polyprenylphenol 6-hydroxylase [Kingella denitrificans ATCC
           33394]
          Length = 503

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 192/414 (46%), Gaps = 32/414 (7%)

Query: 211 QFRELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           QF    L V LR  LE  GP F+K GQ  +TRPDL P D   +L++L  K P      ++
Sbjct: 44  QFANQPLPVRLRLALENLGPIFVKLGQVLSTRPDLLPPDYAAELAKLQDKVPPFDAELSR 103

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329
           + IE++ G+ + E++  F+  PVAS SIAQVHRA+L   + G++     VAVKV  P + 
Sbjct: 104 RQIEQSLGKPIEELYARFDPQPVASASIAQVHRAAL---FSGEE-----VAVKVLRPNLT 155

Query: 330 ESIRRDFVIINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
           + I +D  ++  AA  I  +    K L+  E V +F  ++  ++DL REAA+ S+  +NF
Sbjct: 156 KVIEQDLALMRFAAGCIERLFADGKRLKPREVVAEFDKYLHDELDLMREAANASQLRHNF 215

Query: 389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML 448
                +  P+  +      VL   +  G  +S  ++ L+        LA  G       +
Sbjct: 216 IDSDMLIVPQVYFDYCSREVLTIEWMDGTPISD-INRLKEQGIDLQKLAQYGVEIFFTQV 274

Query: 449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFK 508
               F HADMHPGNILV    +              I LD G+   L++ D+  L   F 
Sbjct: 275 FKHGFFHADMHPGNILVAPDGR-------------YIALDFGIVGSLTEYDKRYLAINFL 321

Query: 509 AVARRDGRTAAECTLR--LSKQQNC-PNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQL 565
           A   RD    A   +    +    C  + +A +  V E    +  P  ++      M +L
Sbjct: 322 AFFNRDYHRVATAHIESGWAPADTCAEDLEAAVRTVCE--PIFNKPLAEISFGIVLM-RL 378

Query: 566 LEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
            E  RR  V +   +  +  T L +EG  R+LDP  ++  T +  L+K  W  S
Sbjct: 379 FETSRRFHVEIQPQLVLLQKTLLNIEGLGRQLDPQLDLWQTARPFLVK--WMDS 430


>gi|167561584|ref|ZP_02354500.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           oklahomensis EO147]
          Length = 525

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 183/395 (46%), Gaps = 23/395 (5%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE+ GP F+K+GQ  +TR DL P D   +L++L  + P    A     +E+A G R+ 
Sbjct: 54  RALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIGLVEKALGARID 113

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
           ++FD FE  PVAS SIAQVH A L+      K     VAVKV  P +   I  D  ++ +
Sbjct: 114 QLFDEFEREPVASASIAQVHFAKLKQGEHAGK----AVAVKVLRPNMLPVIDSDLALMRD 169

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           +A     +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  
Sbjct: 170 IAIWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMF 229

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +     +VLV    +G  +S+ +D L+        LA  G       +  D F HADMHP
Sbjct: 230 WDYSTSSVLVMERMEGVPISQ-IDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHP 288

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V +  K   +          I LD G+   LS  D+  L + F A  +RD    A 
Sbjct: 289 GNIQVSLDPKHFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA- 338

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNV 576
            TL L      P+ +  +EE++ A      P  D     +   + + +L    RR  V +
Sbjct: 339 -TLHLESGWVPPDTR--VEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEI 395

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 396 QPQLVLLQKTMLNVEGLGRSLDPDLDLWKTAKPYL 430


>gi|421861131|ref|ZP_16293194.1| predicted unusual protein kinase [Paenibacillus popilliae ATCC
           14706]
 gi|410829335|dbj|GAC43631.1| predicted unusual protein kinase [Paenibacillus popilliae ATCC
           14706]
          Length = 554

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 185/399 (46%), Gaps = 28/399 (7%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           PQ + L   + L  LE  GPAFIK GQ  +TR DL P  + ++L +L  + P  +     
Sbjct: 46  PQTKTLGERIRL-VLEELGPAFIKLGQLLSTRADLLPGSIIQELEKLQDQVPPFTGMEAG 104

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329
           + IE   GR L ++F  F++ P+A+ SI QVH+A L    P        VAVKV+ PG+ 
Sbjct: 105 RIIEGELGRPLGQLFLRFDDIPLAAASIGQVHKAWL----PNGD----AVAVKVQRPGIT 156

Query: 330 ESIRRDFVII-NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
             I+RD  I+  L    +     V   ++ E VQ+FA  M+S++D   E  +  +     
Sbjct: 157 SIIKRDLEILQGLTEAATRHWSWVSEYQIPEMVQEFAKSMISELDYQHEGHNTGKMAQLL 216

Query: 389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDEL-QGHERLKSALAHIGTHALLKM 447
           RR   +  P+  +      VL   Y  G  ++ Y + L  G ER   ++A    HA+L +
Sbjct: 217 RRDPGIHIPQIDWDRSSAKVLTMEYVDGTMLNYYTERLPDGPER--KSIAERLVHAMLHL 274

Query: 448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF 507
           + +D F HAD HPGNI+V        Q R       +  +D GM  +L+   +  L E  
Sbjct: 275 IFIDGFFHADPHPGNIMV------LDQNR-------IALIDFGMVGQLNGEMKEYLAELL 321

Query: 508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAECMQQLL 566
            A+ +         T RL    +  +  A   ++D+    ++  P  + V   + +  L 
Sbjct: 322 IALMQHRTLGMLRATARLCLISDKTDMDALRRDLDQLRNRYYDVPFSE-VSLGQSLHDLF 380

Query: 567 EKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
              ++HR+    ++  +    L LEG   +LDP  +++D
Sbjct: 381 AVAKKHRIVFPPDLILLAKALLTLEGIVERLDPTLSILD 419


>gi|167568820|ref|ZP_02361694.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           oklahomensis C6786]
          Length = 525

 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 183/395 (46%), Gaps = 23/395 (5%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE+ GP F+K+GQ  +TR DL P D   +L++L  + P    A     +E+A G R+ 
Sbjct: 54  RALESLGPIFVKFGQVLSTRRDLLPVDFANELAKLQDQVPPFDSAVAIGLVEKALGARID 113

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
           ++FD FE  PVAS SIAQVH A L+      K     VAVKV  P +   I  D  ++ +
Sbjct: 114 QLFDEFEREPVASASIAQVHFAKLKQGEHAGK----AVAVKVLRPNMLPVIDSDLALMRD 169

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           +A     +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  
Sbjct: 170 IAIWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMF 229

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +     +VLV    +G  +S+ +D L+        LA  G       +  D F HADMHP
Sbjct: 230 WDYSTSSVLVMERMEGVPISQ-IDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHP 288

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V +  K   +          I LD G+   LS  D+  L + F A  +RD    A 
Sbjct: 289 GNIQVSLDPKHFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA- 338

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNV 576
            TL L      P+ +  +EE++ A      P  D     +   + + +L    RR  V +
Sbjct: 339 -TLHLESGWVPPDTR--VEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEI 395

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 396 QPQLVLLQKTMLNVEGLGRSLDPDLDLWKTAKPYL 430


>gi|121997997|ref|YP_001002784.1| 2-polyprenylphenol 6-hydroxylase [Halorhodospira halophila SL1]
 gi|121589402|gb|ABM61982.1| 2-octaprenylphenol hydroxylase [Halorhodospira halophila SL1]
          Length = 553

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 184/399 (46%), Gaps = 31/399 (7%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP F+K GQ  +TR DL P D+ ++L+ L  + P       ++ +ER +G  
Sbjct: 57  VRRALEELGPIFVKLGQILSTRQDLLPTDVARELARLQDRVPPFPHEDARRIVERTYGCP 116

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           + E+F  F++ P+AS SIAQVH A L   + G +     V VKV  PG+   IRRD  ++
Sbjct: 117 IEEVFAHFDDTPIASASIAQVHGAQL---HDGSE-----VVVKVVRPGIPAVIRRDLDLL 168

Query: 340 NLAAKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
           + AA ++   +P  + L   + +++F   +  ++DL REAA+ S+   NF   + +  P 
Sbjct: 169 HTAAALAERYVPDARRLHPVDVIREFEKNLYDELDLMREAANASQLRRNFEGSELLYVPA 228

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +      V+V     G  +S  ++ L+ H      LA  GT      +  D+F HADM
Sbjct: 229 VYWRYTGRNVMVMERVHGLPISD-MEALKAHGIDLKKLAERGTEIFFTQVFRDSFFHADM 287

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI V   +          ++P  I +D G+   L+ TD   L   F A   RD R  
Sbjct: 288 HPGNIFVDPTRP---------TEPRYIAIDFGIMGSLAPTDHHYLAGNFMAFFNRDYRRV 338

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP------AECMQQLLEKVRRH 572
           AE    L  +         +EE + A      P      P      A+ + +L +  RR 
Sbjct: 339 AE----LHVESGWVPAGTRVEEFEAAIRTVCEPA--FARPLHEISFAQLLLRLFQTGRRF 392

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            + V   +  +  T L +EG  R L P  ++  T +  L
Sbjct: 393 NMEVQPQLVLLQKTLLNIEGLGRNLYPDLDLWTTAKPFL 431


>gi|15676464|ref|NP_273603.1| ubiquinone biosynthesis protein UbiB [Neisseria meningitidis MC58]
 gi|385853749|ref|YP_005900263.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis H44/76]
 gi|416197995|ref|ZP_11618822.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis CU385]
 gi|427826753|ref|ZP_18993802.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis H44/76]
 gi|433464533|ref|ZP_20422021.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM422]
 gi|433487723|ref|ZP_20444894.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis M13255]
 gi|433489902|ref|ZP_20447036.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM418]
 gi|433504406|ref|ZP_20461347.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 9506]
 gi|433506678|ref|ZP_20463592.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 9757]
 gi|433508776|ref|ZP_20465652.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 12888]
 gi|433510820|ref|ZP_20467656.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 4119]
 gi|14548308|sp|Q9K0N0.1|UBIB_NEIMB RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|7225786|gb|AAF40987.1| ubiquinone biosynthesis protein AarF [Neisseria meningitidis MC58]
 gi|316985426|gb|EFV64374.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis H44/76]
 gi|325139789|gb|EGC62322.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis CU385]
 gi|325200753|gb|ADY96208.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis H44/76]
 gi|432204770|gb|ELK60805.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM422]
 gi|432225026|gb|ELK80783.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis M13255]
 gi|432229323|gb|ELK85013.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM418]
 gi|432242447|gb|ELK97968.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 9506]
 gi|432243250|gb|ELK98763.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 9757]
 gi|432248453|gb|ELL03879.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 12888]
 gi|432249390|gb|ELL04802.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 4119]
          Length = 503

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 181/395 (45%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G+ + +
Sbjct: 57  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQSIEK 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           ++  FE  P+AS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 117 LYAEFETEPIASASIAQVHKARL---HSGEQ-----VAVKVLRPNLLPVIEQDLSLMRFG 168

Query: 343 AK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF+    +  PK  Y
Sbjct: 169 AGWVERLFADGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSDMLIVPKVFY 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  VS  + +L+        LA  G       +  D F HADMHPG
Sbjct: 229 DYCTSDVLTIEWMDGTPVSD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD R  A  
Sbjct: 288 NILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA 334

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A +  V E    +  P   +      + +L E  RR  V +  
Sbjct: 335 HIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQP 391

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 392 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|119475149|ref|ZP_01615502.1| 2-polyprenylphenol 6-hydroxylase [marine gamma proteobacterium
           HTCC2143]
 gi|119451352|gb|EAW32585.1| 2-polyprenylphenol 6-hydroxylase [marine gamma proteobacterium
           HTCC2143]
          Length = 540

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 188/402 (46%), Gaps = 27/402 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + LE  GP F+K+GQ  +TR DL P D+  +L++L  + P          IE A G+ + 
Sbjct: 57  QVLEELGPIFVKFGQMLSTRRDLLPDDIIDELAKLQDQVPPFPSQQAVDIIEGALGKSVD 116

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIIN 340
           ++F  F   P+AS S+AQVH A+L   + G++     V VKV  PG+  +I +D  ++  
Sbjct: 117 DLFAQFSSQPMASASVAQVHAATL---FSGEE-----VVVKVVRPGIELTILQDIKLLFT 168

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           LA  I    P  + LR  + V  + + ++ ++DL RE  + S+   NF     +  P+  
Sbjct: 169 LAELIEKYFPDGRRLRPVDVVNDYQITILDELDLQREGGNTSQLRRNFVDSDLLYVPEVY 228

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +   +  VL      G  V+  V  L+       ALA  G       +  D+F HADMHP
Sbjct: 229 WDFTNRQVLTMERIHGIPVTD-VKALEQQNTNMQALAERGVEIFFTQVFRDSFFHADMHP 287

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V    K++ +      KP  I +D  +   LS++D+  +     A+ +RD R  AE
Sbjct: 288 GNIFV---SKQNPE------KPQYIAIDCAIIGSLSESDQYYMARNLLAIFQRDYRLVAE 338

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             +    +  + +    ++ +  V E    +  P  ++    + +  L E  RR  + V 
Sbjct: 339 LHIECGWIPAETHVHEFESVMRSVCE--PIFEKPLAEISF-GQLLISLFETARRFEMEVQ 395

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
            ++  +  T L +EG  R+L P  N+ DT Q  L K  W K 
Sbjct: 396 PSLVLLQKTLLNIEGLGRELYPQLNLWDTAQPFLEK--WIKD 435


>gi|385327890|ref|YP_005882193.1| putative ubiquinone biosynthesis protein aarf [Neisseria
           meningitidis alpha710]
 gi|433468745|ref|ZP_20426175.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 98080]
 gi|308388742|gb|ADO31062.1| putative ubiquinone biosynthesis protein aarf [Neisseria
           meningitidis alpha710]
 gi|432205550|gb|ELK61576.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 98080]
          Length = 503

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 184/400 (46%), Gaps = 30/400 (7%)

Query: 219 VVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG 277
           V LR  LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G
Sbjct: 52  VCLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLG 111

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
           + + +++  FE  P+AS SIAQVH+A L   + G++     VAVKV  P +   I +D  
Sbjct: 112 QPIEKLYAEFETEPIASASIAQVHKARL---HSGEQ-----VAVKVLRPNLLPVIEQDLS 163

Query: 338 IINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF 396
           ++   A  +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF+    +  
Sbjct: 164 LMRFGAGWVERLFADGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSDMLIV 223

Query: 397 PKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHA 456
           PK  Y      VL   +  G  VS  + +L+        LA  G       +  D F HA
Sbjct: 224 PKVFYDYCTSDVLTIEWMDGTPVSD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHA 282

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNILV    +              I LD G+   L+  D+  L   F A   RD R
Sbjct: 283 DMHPGNILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYR 329

Query: 517 TAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
             A   +    +         +A +  V E    +  P   +      + +L E  RR  
Sbjct: 330 RVATAHIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFN 386

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           V +   +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 387 VEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|421560723|ref|ZP_16006578.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM2657]
 gi|254671464|emb|CBA09007.1| probable ubiquinone biosynthesis protein [Neisseria meningitidis
           alpha153]
 gi|402339726|gb|EJU74938.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM2657]
          Length = 503

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 184/400 (46%), Gaps = 30/400 (7%)

Query: 219 VVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG 277
           V LR  LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G
Sbjct: 52  VCLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLG 111

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
           + + +++  FE  P+AS SIAQVH+A L   + G++     VAVKV  P +   I +D  
Sbjct: 112 QPIEKLYAEFETEPIASASIAQVHKARL---HSGEQ-----VAVKVLRPNLLPVIEQDLS 163

Query: 338 IINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF 396
           ++   A  +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF+    +  
Sbjct: 164 LMRFGAGWVERLFADGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSDMLIV 223

Query: 397 PKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHA 456
           PK  Y      VL   +  G  VS  + +L+        LA  G       +  D F HA
Sbjct: 224 PKVFYDYCTSDVLTIEWMDGTPVSD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHA 282

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNILV    +              I LD G+   L+  D+  L   F A   RD R
Sbjct: 283 DMHPGNILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYR 329

Query: 517 TAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
             A   +    +         +A +  V E    +  P   +      + +L E  RR  
Sbjct: 330 RVATAHIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFN 386

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           V +   +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 387 VEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|406934375|gb|EKD68692.1| hypothetical protein ACD_47C00482G0002 [uncultured bacterium]
          Length = 563

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 168/381 (44%), Gaps = 25/381 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK+GQ  + RPD+ P  L  +LS+L  +     F     TIE  + +   EI
Sbjct: 71  LEELGPTFIKFGQLLSLRPDMLPEALITELSKLQDEVEPFPFETVISTIESEYQKPYGEI 130

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           F      P+ S SIAQVH+A L     G K     V +KVR P + ++I  D  ++ N A
Sbjct: 131 FSEITPEPIGSASIAQVHKAIL---LCGDK-----VIIKVRRPDIEKTIESDIEILFNFA 182

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +++  P ++       V +FA  +  ++D   EA +  RF  NF     V  P     
Sbjct: 183 KMLANRFPEIRLYEPVRMVGEFARHIRREIDFGIEAQNCERFHKNFAETPTVHIPLVYQQ 242

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                +LV  Y  G    R V+EL+        +AH G  A  KM+L+D   H D HPGN
Sbjct: 243 YTTERLLVLEYMSGIKADR-VEELKALGFDLKTIAHNGASAFFKMILIDGLFHGDPHPGN 301

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           + +R                 + F+D G+T +L++  +  +V  F  +  +D     +  
Sbjct: 302 VFIRYDGT-------------IAFIDFGITGKLTEEHQTRVVNMFLGLMTKDSDKILKNL 348

Query: 523 LRLSKQQNCPNPKAFIEEVDEAF-AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVC 581
           L +    +  +      E+DE    ++G P  + +   + M Q ++   RH++ V     
Sbjct: 349 LVMGVMPDNIDIGLLRYEIDEFIDDYYGRPLKN-IELGKLMLQTIKIAVRHKIRVPAEYS 407

Query: 582 TVMVTTLVLEGWQRKLDPGYN 602
            +   T+ +E   R LDP + 
Sbjct: 408 LLCKATMEIESIGRTLDPDFE 428


>gi|74317012|ref|YP_314752.1| 2-octaprenylphenol hydroxylase [Thiobacillus denitrificans ATCC
           25259]
 gi|74056507|gb|AAZ96947.1| probable ubiquinone biosynthesis protein [Thiobacillus
           denitrificans ATCC 25259]
          Length = 559

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 187/390 (47%), Gaps = 26/390 (6%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP F+K GQ  ATR D+FP +   +  +LHS+ P  S+      +  A G  
Sbjct: 64  VRRALEELGPTFVKLGQVLATRVDMFPPNWIAEFEKLHSQVPAQSYEVMYPELVAAIGGE 123

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
             E+F  F+  P+A+ SIAQV+RA+L+   P        V VK+R PG+   IR D  I+
Sbjct: 124 PGEVFAAFDPVPLAAASIAQVYRATLKDGTP--------VVVKMRRPGIETVIRADLRIL 175

Query: 340 NLAAKI--SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP 397
           + AA++  S V  A ++  + + V QF   +  ++DLA+EA ++ +F  +F     V  P
Sbjct: 176 DHAARLLESEVADARRYDPV-QIVSQFRRSLSRELDLAKEARNIDQFARHFATDPLVKIP 234

Query: 398 KPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHAD 457
           K  +   +  V V+    G       D+L+        LA  G +A+L M+L+  + HAD
Sbjct: 235 KVYWEFTNDQVNVQEEIVG-LAGVSPDKLRAAGLDPKLLAARGANAVLSMVLLHGYFHAD 293

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGN+             LF     +  +D GM   L++  R  +V+   A+ RRD + 
Sbjct: 294 PHPGNV-------------LFLPGNRIGMIDFGMVGMLTEPRRNQIVDLLHALTRRDEQA 340

Query: 518 AAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             +  L  S   + P+ +    +V E    +   +   V     +  +   +R + + + 
Sbjct: 341 LLQVLLDWSG-DSVPDDERLAYDVAELMQSYDDLQLKDVKIGALLNDITALMRDNNLVLP 399

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
            ++  +  T + LEG  ++LDP ++++D +
Sbjct: 400 ADLTLLFKTLITLEGLGQQLDPEFHMIDNV 429


>gi|323452621|gb|EGB08494.1| hypothetical protein AURANDRAFT_63795 [Aureococcus anophagefferens]
          Length = 461

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/313 (34%), Positives = 153/313 (48%), Gaps = 35/313 (11%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           +ETAGP F+K  QWA+TRPD+F   LC + + LH     H++A+T + +  AFG   +  
Sbjct: 141 VETAGPTFVKLAQWASTRPDMFDAALCARFAVLHDATTPHAWAHTAEVMASAFGDDWARR 200

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
            +  E+  + SG IAQV+R        G+K     VAVKV HP + E +  D  I+   A
Sbjct: 201 VE-LEQETIGSGCIAQVYRGFC----DGRK-----VAVKVCHPQIQEKVSADMRILAYFA 250

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
                    +WL   E V  F   M  Q+DL  EA +L RF  NF + +DV    PV  L
Sbjct: 251 ---------RWLGGKELVGAFGALMRDQMDLRIEARNLERFTANFGKERDVDVVFPVPVL 301

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
           V P VLVETY +G  ++ +  +       K  +A  G   +LKM+   NFIHAD+HPGN+
Sbjct: 302 VRPDVLVETYVEGRPINTFTTDATDAA-TKRRIADAGCQLVLKMVFTHNFIHADLHPGNV 360

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
           LV V  ++            V  LD G+  E++     N   F   V     R  ++  +
Sbjct: 361 LVDVDDERV----------RVGLLDAGLAYEVT-----NHKSFLNVVYHLMMREGSQAGV 405

Query: 524 RLSKQQNCPNPKA 536
           R  ++   PN K 
Sbjct: 406 RAGQESEIPNFKG 418


>gi|392394219|ref|YP_006430821.1| unusual protein kinase [Desulfitobacterium dehalogenans ATCC 51507]
 gi|390525297|gb|AFM01028.1| putative unusual protein kinase [Desulfitobacterium dehalogenans
           ATCC 51507]
          Length = 558

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 177/389 (45%), Gaps = 31/389 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + LE  GP ++K GQ A+TRPD+ P  L  +L +L  + P  SFA  ++ IE   G    
Sbjct: 61  KALEELGPTYVKIGQIASTRPDIIPDYLITELEKLQDQVPPFSFADVRQIIETELGALPE 120

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIIN 340
           +IF  FEE PVA+ SI QVH A L+    G+      VAVK++ P +  +I  D  ++++
Sbjct: 121 DIFQHFEEKPVAAASIGQVHYAVLK---TGEN-----VAVKIQRPHIARTIETDLEILLD 172

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           LAA     +       + + V++FA  + +++D   E ++  R    F+    +  PK  
Sbjct: 173 LAALAEKRVDWAALYHVKDMVEEFANSLRNELDYEIEGSNAERMGKQFQGDPTIRIPKVY 232

Query: 401 YPLVHPAVLVETYEQGECVSRYVD-ELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
               +  VL   Y QG  +S++   E  G++R    LA     A+ K +L++ F H D H
Sbjct: 233 KEYSNKKVLTLEYIQGVKLSQFETLEALGYDR--KVLAENLIKAMFKQILIEGFFHGDPH 290

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGNI V   Q  S              +D GM   LS   + +       + RR      
Sbjct: 291 PGNIFVLPQQVIS-------------LIDFGMIGRLSPDMKDHFASLVIGMMRRKTEDMV 337

Query: 520 ECTLRLSKQQNCPNPKAFIEEVD---EAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
           E    +       +PKA   +VD   E +      E DL      +  L +   +HR+ +
Sbjct: 338 EAVFAMGIVPEDMDPKALYRDVDLLREKYLDVPMSEVDL---GNAVNDLFKVTYKHRIII 394

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
             ++  +  + L LEG   +LDP  +++D
Sbjct: 395 PADLVLLGKSLLSLEGIVEQLDPEISIID 423


>gi|430839409|ref|ZP_19457350.1| ubiquinone biosynthesis protein [Enterococcus faecium E0688]
 gi|430858897|ref|ZP_19476516.1| ubiquinone biosynthesis protein [Enterococcus faecium E1552]
 gi|430490867|gb|ELA67363.1| ubiquinone biosynthesis protein [Enterococcus faecium E0688]
 gi|430544743|gb|ELA84765.1| ubiquinone biosynthesis protein [Enterococcus faecium E1552]
          Length = 581

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 182/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 35  VKKAFEELGPTFIKIGQMLSVREDLLSSTFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 94

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + + IR D  + 
Sbjct: 95  LSDIFDDFSKSPFASASMGQAHRAKLK---NGDS-----VVVKIQHPNIAKEIRLDLQLF 146

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 147 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 206

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++   G E         +LK  +A +     +K +  
Sbjct: 207 YDAFCSKKVIVMEEMSGKNLNHLMNAKNGTETFITGIQNKQLKQEVAKLLVENFMKQVFD 266

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V     Q ++SQK             FR+         P+ + +
Sbjct: 267 DGFFHADPHPGNLLFHVLTKEEQTRASQKTETVHEKEFGSFTFRASTSTEDPVAPYTVNY 326

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 327 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGVFDESRFHQELTSFLE 386

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 387 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 445


>gi|350571957|ref|ZP_08940269.1| 2-polyprenylphenol 6-hydroxylase [Neisseria wadsworthii 9715]
 gi|349790835|gb|EGZ44733.1| 2-polyprenylphenol 6-hydroxylase [Neisseria wadsworthii 9715]
          Length = 503

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 188/410 (45%), Gaps = 34/410 (8%)

Query: 211 QFRELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           ++ +  L V LR  LE+ GP F+K+GQ  +TRPDL P D   +L++L  + P      ++
Sbjct: 44  EYSDTSLPVRLRLALESLGPVFVKFGQVLSTRPDLIPHDYAVELAKLQDRVPPFDAELSR 103

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329
           + IE++ G+ + E++  F+  PVAS S+AQVH+A L   + G++     VAVKV  P + 
Sbjct: 104 RQIEQSLGKPIDELYAEFDTKPVASASVAQVHKARL---HSGEQ-----VAVKVLRPNLA 155

Query: 330 ESIRRDFVIINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
             I +D  ++   A  I  +    K LR  E V +F  ++  ++DL REAA+ S+   NF
Sbjct: 156 PVIEQDLALLRFGAGWIERLFADGKRLRPREVVDEFDKYLHDELDLMREAANASQLGRNF 215

Query: 389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML 448
           +    +  P+  Y      VL   +  G  V+ Y+  L+        LA  G       +
Sbjct: 216 KDSTMLIVPQVYYDYCSRDVLTIEWMNGTPVA-YIAGLKAKGIDLQRLARYGVEIFFTQV 274

Query: 449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFK 508
               F HADMHPGNILV                   I LD G+   L+  D+  L   F 
Sbjct: 275 FRHGFFHADMHPGNILV-------------ADDGRYIALDFGIVGSLTDYDKRYLAINFL 321

Query: 509 AVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQ 563
           A   RD    A  T  +      P+ +A  EE++ A        +  P   +      + 
Sbjct: 322 AFFNRDYHRVA--TAHIESGWVPPDTRA--EELEAAVRAVCEPIFNKPISQISF-GLVLM 376

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +L E  RR  V +   +  +  T L +EG  R+LDP  ++  T +  L +
Sbjct: 377 RLFETSRRFNVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWTTAKPFLTR 426


>gi|421543913|ref|ZP_15989996.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM140]
 gi|421546008|ref|ZP_15992061.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM183]
 gi|421548053|ref|ZP_15994081.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM2781]
 gi|421552359|ref|ZP_15998336.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM576]
 gi|402324783|gb|EJU60209.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM183]
 gi|402324948|gb|EJU60369.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM140]
 gi|402326775|gb|EJU62173.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM2781]
 gi|402331565|gb|EJU66898.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM576]
          Length = 503

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 187/404 (46%), Gaps = 38/404 (9%)

Query: 219 VVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG 277
           V LR  LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G
Sbjct: 52  VCLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLG 111

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
           + + +++  FE  P+AS SIAQVH+A L   + G++     VAVKV  P +   I +D  
Sbjct: 112 QPIEKLYAEFETEPIASASIAQVHKARL---HSGEQ-----VAVKVLRPNLLPVIEQDLS 163

Query: 338 IINLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF 396
           ++   A  +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF+    +  
Sbjct: 164 LMRFGAGWVERLFSDGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSDMLIV 223

Query: 397 PKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHA 456
           PK  Y      VL   +  G  VS  + +L+        LA  G       +  D F HA
Sbjct: 224 PKVFYDYCTSDVLTIEWMDGTPVSD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHA 282

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDR----VNLVEFFKAVAR 512
           DMHPGNILV    +              I LD G+   L+  D+    +NL+ FF     
Sbjct: 283 DMHPGNILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINLLAFFN---- 325

Query: 513 RDGRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKV 569
           RD R  A   +    +         +A +  V E    +  P   +      + +L E  
Sbjct: 326 RDYRRVATAHIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVS 382

Query: 570 RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           RR  V +   +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 383 RRFNVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|416173512|ref|ZP_11609001.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis
           OX99.30304]
 gi|325129688|gb|EGC52501.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis
           OX99.30304]
          Length = 503

 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 181/395 (45%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G+ + +
Sbjct: 57  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQPIEK 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           ++  FE  P+AS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 117 LYAEFETEPIASASIAQVHKARL---HSGEQ-----VAVKVLRPNLLPVIEQDLSLMRFG 168

Query: 343 AK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF+    +  PK  Y
Sbjct: 169 AGWVERLFADGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSDMLIVPKVFY 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  VS  + +L+        LA  G       +  D F HADMHPG
Sbjct: 229 DYCTSDVLTIEWMDGTPVSD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD R  A  
Sbjct: 288 NILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA 334

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A +  V E    +  P   +      + +L E  RR  V +  
Sbjct: 335 HIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQP 391

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 392 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|261365790|ref|ZP_05978673.1| 2-polyprenylphenol 6-hydroxylase [Neisseria mucosa ATCC 25996]
 gi|288565639|gb|EFC87199.1| 2-polyprenylphenol 6-hydroxylase [Neisseria mucosa ATCC 25996]
          Length = 503

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 197/446 (44%), Gaps = 36/446 (8%)

Query: 172 TSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAF 231
           T  LY L E    L+R  +   L      M P +  F  +   + L +    LE+ GP F
Sbjct: 13  TLYLYHLAELFAALVRPGWARTLLK----MLPQSSEFENEPPAVRLRL---ALESLGPIF 65

Query: 232 IKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAP 291
           IK+GQ  +TRPDL P D   +L++L  K P      ++  IE++ G+ +  ++  FE  P
Sbjct: 66  IKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDAQLSRSQIEKSLGQSIETLYAEFETEP 125

Query: 292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL-AAKISSVIP 350
           VAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   AA +  +  
Sbjct: 126 VASASIAQVHKARL---HSGEQ-----VAVKVLRPNLLPVIEQDLSLMRFGAAWVERLFA 177

Query: 351 AVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLV 410
             K L+  E V +F  ++  ++DL REAA+ S+   NF+    +  PK  Y      VL 
Sbjct: 178 DGKRLKPREVVAEFDKYLHDELDLMREAANASQLRRNFQNSNMLIVPKVFYDYCTSDVLT 237

Query: 411 ETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQK 470
             +  G  VS  + +L+        LA  G       +  D F HADMHPGNILV    +
Sbjct: 238 IEWMDGTPVSE-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGNILVAADNR 296

Query: 471 KSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR---LSK 527
                         I LD G+   L+  D+  L   F A   RD    A   +    +  
Sbjct: 297 -------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYHRVATAHIESGWVPA 343

Query: 528 QQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTT 587
                  +A +  V E    +  P   +      + +L E  RR  V +   +  +  T 
Sbjct: 344 DTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQPQLVLLQKTL 400

Query: 588 LVLEGWQRKLDPGYNVMDTLQTLLLK 613
           L +EG  R+LDP  ++  T +  L+K
Sbjct: 401 LNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|357406865|ref|YP_004918789.1| 2-polyprenylphenol 6-hydroxylase [Methylomicrobium alcaliphilum
           20Z]
 gi|351719530|emb|CCE25206.1| 2-polyprenylphenol 6-hydroxylase [Methylomicrobium alcaliphilum
           20Z]
          Length = 516

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 204/446 (45%), Gaps = 39/446 (8%)

Query: 174 VLYSLVECVIL--LMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAF 231
           V + L E V+   L R +   V  SP+  +    +S G + R        R LE  GP +
Sbjct: 18  VFHGLDEIVLKTHLFRPIRYLVFLSPTFWLRRGTESRGVRIR--------RALEDLGPIY 69

Query: 232 IKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAP 291
           +K+GQ  +TR DL P D+  +L +L  K P  S +  +  IE+  G  +SE F  F++ P
Sbjct: 70  VKFGQALSTRKDLLPEDIADELVKLQDKVPPFSSSIARAIIEKELGIPISEAFAEFDDEP 129

Query: 292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVI-P 350
           +AS S+AQVH A L     G++     V VKV  P + + IR D  ++   A+ +     
Sbjct: 130 LASASVAQVHTAVLN---NGEQ-----VIVKVLRPDIEQRIRSDVGLLYELARFAERFWS 181

Query: 351 AVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLV 410
             + LR  E V +F    + ++DL REAA+ ++   NF   + +  P+  +PL    V+V
Sbjct: 182 DARRLRPREVVMEFEKSTLDELDLVREAANAAKLRRNFEHSEMIYVPEVHWPLTRQKVMV 241

Query: 411 ETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQK 470
               +G  V   +++L+        LA  G       +  DNF HADMHPGNI V +  K
Sbjct: 242 MERIKGIPVGN-IEQLRAGNADFKLLAERGVEIFFTQVFRDNFFHADMHPGNIFVELPAK 300

Query: 471 KSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR---LSK 527
                         + +D G+   LS++D+  L E F A   RD R  A+  +    +  
Sbjct: 301 -------------YLAVDFGIVGTLSESDQRYLAENFLAFFNRDYRRVAQMHVESGWVPG 347

Query: 528 QQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTT 587
                + ++ I  V E    +  P  D+      + +L +  RR  ++V   +  +  T 
Sbjct: 348 TTRVEDFESAIRSVCE--PIFEKPLKDISF-GHLLLRLFQTARRFDMHVQPQLVLLQKTL 404

Query: 588 LVLEGWQRKLDPGYNVMDTLQTLLLK 613
           L +EG  R+L P  ++  T +  L K
Sbjct: 405 LNIEGLGRQLYPELDLWQTAKPFLEK 430


>gi|114319235|ref|YP_740918.1| 2-octaprenylphenol hydroxylase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114225629|gb|ABI55428.1| 2-octaprenylphenol hydroxylase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 553

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 179/389 (46%), Gaps = 27/389 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+ ++L+ L  + P    +  +  +ERA+G  L E
Sbjct: 61  ALEDLGPIFVKFGQILSTRRDLLPPDISEELARLQDRVPPFPGSEARAIVERAYGHSLDE 120

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
            F+ F+E P+AS SIAQVH   LR    G+      V VKV  PG+   IRRD  ++   
Sbjct: 121 YFEHFDEVPLASASIAQVHLGRLR---DGRD-----VVVKVVRPGIPRVIRRDLDLMYTV 172

Query: 343 AKISSVI-PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A ++       K L   + V++F   +  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 173 AGLAERYWSEGKRLHPMDVVREFEKNLYDELDLMREAANASQLRRNFEGSALLYVPEVDW 232

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
           PL    V+V    QG  +S  V+ L+       ALA  G       +  D+F HADMHPG
Sbjct: 233 PLTRRDVMVMERIQGIHISD-VETLRARGVDMQALAERGVEIFFTQVFRDSFFHADMHPG 291

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V   +            P  + +D G+   L+ TD   L E F A   RD R  AE 
Sbjct: 292 NIFVDPDRP---------DDPRYLAVDFGIMGTLNPTDHRYLAENFLAFFNRDYRRVAE- 341

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTP--EGDL--VHPAECMQQLLEKVRRHRVNVD 577
              L  +     P   ++E + A      P  E  L  +     + +L +  RR  + V 
Sbjct: 342 ---LHVESGWVPPDTRVDEFEAAIRTVCEPIFERPLHEISFGALLLRLFQTGRRFNMEVQ 398

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
             +  +  T L +EG  R L P  ++  T
Sbjct: 399 PQLVLLQKTLLNIEGLGRDLYPELDLWKT 427


>gi|418529142|ref|ZP_13095082.1| putative ubiquinone biosynthesis protein UbiB [Comamonas
           testosteroni ATCC 11996]
 gi|371453568|gb|EHN66580.1| putative ubiquinone biosynthesis protein UbiB [Comamonas
           testosteroni ATCC 11996]
          Length = 522

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 187/401 (46%), Gaps = 35/401 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+ ++L++L  + P         TIER+F + L +I
Sbjct: 57  LEELGPIFVKFGQVLSTRSDLMPPDVAEELAKLQDRVPPFDSQIAVDTIERSFRKPLEQI 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  FE  PVAS SIAQVH A +R +   +      VAVKV  PG+   I +D  ++++ A
Sbjct: 117 FISFEREPVASASIAQVHFARVRDKAGVEH----DVAVKVLRPGMKSVIDKDLALMHMMA 172

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  +    K L+  E V +F  ++  ++DL REA++ ++   N      V  P+  + 
Sbjct: 173 SWLERLSHDGKRLKPREVVAEFDNYLHDELDLIREASNAAQLRRNMDGLDLVLIPEIHWD 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIHA 456
             H  V+V    +G  +S+        ERL+ A      LA  G       +  D F HA
Sbjct: 233 YCHTDVMVMERMKGVPISQV-------ERLREAGVDIPKLARDGVTIFFTQVFRDGFFHA 285

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNI+V +      +          I LD G+   L++ D+  L + F A  RRD +
Sbjct: 286 DMHPGNIMVSLEPDTFGR---------YISLDFGIVGTLTEFDKEYLAQNFLAFFRRDYK 336

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRH 572
             A     L  +         +EE++ A      P  D     +     + +L +  RR 
Sbjct: 337 RVAA----LHVESGWVPATTRVEELEAAIRAVCEPYFDRPLAEISLGMVLMRLFQTSRRF 392

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +V +   +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 393 QVEIQPQLVLLQKTLLNIEGLGRQLDPNLDLWSTAKPFLEK 433


>gi|83643950|ref|YP_432385.1| 2-polyprenylphenol 6-hydroxylase [Hahella chejuensis KCTC 2396]
 gi|123534599|sp|Q2SN14.1|UBIB_HAHCH RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|83631993|gb|ABC27960.1| 2-polyprenylphenol 6-hydroxylase [Hahella chejuensis KCTC 2396]
          Length = 546

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 187/402 (46%), Gaps = 27/402 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE  GP F+K+GQ  +TR DL P DL  +L  L  K P  +     + IE +    +S
Sbjct: 57  RALEELGPIFVKFGQILSTRKDLLPEDLADELKRLQDKVPPFASDMAVRIIEESLKSPVS 116

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           E+F  F+  P+AS SIAQVH A+L+    G++     V VKV  PG+ ++IR D  ++ L
Sbjct: 117 ELFADFQTYPMASASIAQVHAATLK---NGKE-----VVVKVIRPGIEKTIRLDIALMLL 168

Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
            A+ + +     K L   E V+ +   ++ ++DL REAA+ S+   NF   + +  P+  
Sbjct: 169 VARLVENYWEDGKRLHPVEVVKDYEHTIIDELDLQREAANTSQLKRNFAGSELIYIPEVY 228

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           + + H  VLV     G  ++  V++L+        LA  G       +  D+F HADMHP
Sbjct: 229 WEMTHSRVLVMERIYGVPIAD-VEQLRKANVNMKLLAERGVEIFFTQVFRDSFFHADMHP 287

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V V+           + P  I +D G+   L+  D+  L     A  RRD R  A 
Sbjct: 288 GNIFVDVSNP---------ANPRYIAIDCGIVGTLTPEDQSYLARNLLAFFRRDYRQVAV 338

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             +    +         +A I  V E    +  P  D+    + + +L +  RR  + V 
Sbjct: 339 LHISSGWVPGHTRVNEFEAAIRTVCE--PIFERPLKDISF-GQFLMRLFQTARRFDMEVQ 395

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
             +  +  T L +EG  R+L P  ++  T Q  L   +W K 
Sbjct: 396 PQLVLLQKTLLNIEGLGRQLYPDLDLWSTAQPFL--ENWMKQ 435


>gi|261401031|ref|ZP_05987156.1| 2-polyprenylphenol 6-hydroxylase [Neisseria lactamica ATCC 23970]
 gi|269209037|gb|EEZ75492.1| 2-polyprenylphenol 6-hydroxylase [Neisseria lactamica ATCC 23970]
          Length = 503

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 180/395 (45%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      ++  IE++ G+ + +
Sbjct: 57  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSRSQIEKSLGQPIEK 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL- 341
           ++  FE  PVAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 117 LYAEFETEPVASASIAQVHKARL---HSGER-----VAVKVLRPNLLPLIEQDLSLMRFG 168

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +  +    K L+  E V +F  ++  ++DL REAA+  +   NF+    +  PK  Y
Sbjct: 169 AACVERLFSDGKRLKPREVVAEFDKYLHDELDLMREAANAGQLGRNFQNSNMLIVPKVFY 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  VS  + +L+        LA  G       +  D F HADMHPG
Sbjct: 229 DYCTSDVLTIEWMDGTPVSD-IAKLKADGINLHKLADYGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD R  A  
Sbjct: 288 NILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA 334

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A +  V E    +  P   +      + +L E  RR  V +  
Sbjct: 335 HIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQP 391

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 392 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|145590073|ref|YP_001156670.1| 2-polyprenylphenol 6-hydroxylase [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145048479|gb|ABP35106.1| 2-octaprenylphenol hydroxylase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 528

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 193/413 (46%), Gaps = 24/413 (5%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           TLE  GP F+K+GQ  +TR DL P D+  +L++L  + P  S   +++ IE   G+ + +
Sbjct: 57  TLEALGPIFVKFGQVLSTRRDLLPEDISNELAKLQDQVPPFSNEESRRLIEADLGQPIED 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +F  F+  PVAS S+AQVH   LR      +     VA+KV  PG+   I  D  ++ +L
Sbjct: 117 VFISFDATPVASASVAQVHFGVLRATEKHPEWAHKEVAIKVLRPGILPVIEGDLALMYDL 176

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  I       + L+  E+V++F  ++  ++DL REAA+ S+    F   + +  P+  +
Sbjct: 177 AKVIEKSSEDGRRLKPRENVREFDTYLHDELDLMREAANASQLRRYFVNSEKLMIPEMYW 236

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
            L H  V+V     G  + R   EL         LA  G       +    F HADMHPG
Sbjct: 237 DLCHTNVIVMERMHGISIGRTA-ELHAAGVDFKKLAADGVEIFFTQVFEYGFFHADMHPG 295

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI++ +      +          I LD G+   LS++D+  L   F A   RD R  AE 
Sbjct: 296 NIMISLESDTFGR---------FISLDFGIVGALSESDKNYLALNFLAFFNRDYRRVAE- 345

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVD 577
              L  +         +EE++ A      P  D     +     + +L +  RR +V + 
Sbjct: 346 ---LHIESGWVPANTRVEELEGAVRSVCEPYFDRPLKEISLGIVLMRLFQTSRRFKVEIQ 402

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADW-AKSLSYT--IDGL 627
             +  +  T L +EG  R+LDP  ++  T + +L K  W +K L ++  IDGL
Sbjct: 403 PQLTLLQKTLLNVEGLARQLDPDLDLWKTAKPILEK--WVSKQLGWSGLIDGL 453


>gi|433655149|ref|YP_007298857.1| 2-octaprenylphenol hydroxylase [Thermoanaerobacterium
           thermosaccharolyticum M0795]
 gi|433293338|gb|AGB19160.1| 2-octaprenylphenol hydroxylase [Thermoanaerobacterium
           thermosaccharolyticum M0795]
          Length = 557

 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 180/392 (45%), Gaps = 24/392 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           TLE  GP F+K GQ  +TRPDL P D+  +LS+L    P   F   KK IE      +S 
Sbjct: 63  TLEELGPTFVKMGQLLSTRPDLLPNDIIVELSKLQDDVPPVEFETIKKIIEEELKDDVSN 122

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+E P+AS SI QV+RA  +  Y         V VKV+ PG+ + I  D +I+   
Sbjct: 123 LFRSFDEKPIASASIGQVYRARTKEGYD--------VVVKVQRPGIYDKINGDIIILKTI 174

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           AKI +       +   + V + +  +++++D   E  +  +F  NF     V  PK  + 
Sbjct: 175 AKILNERLTDSPVDFVDIVNELSESLLNELDYTLEGNNADKFRENFINETYVYIPKIYWE 234

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VL   Y  G  V      ++    LK  +A+ G  ++L  +    F H D HPGN
Sbjct: 235 YTTKKVLTMEYIDGISVKNKHKLIENGFDLKK-IAYNGAMSILMQIFEFGFFHGDPHPGN 293

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           IL++   K S             ++D G+   + +++R  +VE FKA    D        
Sbjct: 294 ILIKSDGKLS-------------YIDFGIVGYIDRSNRQMIVELFKAFIDNDTDEVVSIL 340

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVC 581
             +   ++  N +    ++    + F+ TP  + ++  + ++++   + ++++ +     
Sbjct: 341 SDMDAIRDETNIRHLKYDLSGMISYFYNTPLKN-ININDSVKKITSLIYKYKLMMPAEFT 399

Query: 582 TVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            ++ +   +EG  ++LDP +++ D  +  + K
Sbjct: 400 LLLKSLATIEGVGKELDPEFSISDIAKDFIRK 431


>gi|59801768|ref|YP_208480.1| ubiquinone biosynthesis protein UbiB [Neisseria gonorrhoeae FA
           1090]
 gi|291043269|ref|ZP_06568992.1| ubiquinone biosynthesis protein [Neisseria gonorrhoeae DGI2]
 gi|293398588|ref|ZP_06642766.1| 2-polyprenylphenol 6-hydroxylase [Neisseria gonorrhoeae F62]
 gi|59718663|gb|AAW90068.1| putative ubiquinone biosynthesis protein [Neisseria gonorrhoeae FA
           1090]
 gi|291012875|gb|EFE04858.1| ubiquinone biosynthesis protein [Neisseria gonorrhoeae DGI2]
 gi|291611059|gb|EFF40156.1| 2-polyprenylphenol 6-hydroxylase [Neisseria gonorrhoeae F62]
          Length = 503

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 181/395 (45%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G+ + +
Sbjct: 57  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQPIEK 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL- 341
           ++  FE  PVAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 117 LYAEFETEPVASASIAQVHKARL---HSGER-----VAVKVLRPNLLPLIEQDLSLMRFG 168

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +  +    K L+  E V +F  ++  ++DL REAA+  +   NF+    +  PK  Y
Sbjct: 169 AAWVERLFSDGKRLKPREVVAEFDKYLHDELDLMREAANAGQLGRNFQNSNMLIVPKVFY 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  VS  + +L+        LA  G       +  D F HADMHPG
Sbjct: 229 DYCTSDVLTIEWMDGTPVSD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD R  A  
Sbjct: 288 NILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA 334

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A +  V E    +  P   +      + +L E  RR  V +  
Sbjct: 335 HIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQP 391

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 392 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|340361743|ref|ZP_08684157.1| 2-polyprenylphenol 6-hydroxylase [Neisseria macacae ATCC 33926]
 gi|339888163|gb|EGQ77639.1| 2-polyprenylphenol 6-hydroxylase [Neisseria macacae ATCC 33926]
          Length = 522

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 197/446 (44%), Gaps = 36/446 (8%)

Query: 172 TSVLYSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAF 231
           T  LY L E    L+R  +   L      M P +  F  +   + L +    LE+ GP F
Sbjct: 32  TLYLYRLAELFAALVRPGWARTLLK----MLPQSSEFENEPPAVRLRL---ALESLGPIF 84

Query: 232 IKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAP 291
           IK+GQ  +TRPDL P D   +L++L  K P      ++  IE++ G+ +  ++  FE  P
Sbjct: 85  IKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDAQLSRSQIEKSLGQSIETLYAEFETEP 144

Query: 292 VASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL-AAKISSVIP 350
           VAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   AA +  +  
Sbjct: 145 VASASIAQVHKARL---HSGEQ-----VAVKVLRPNLLPVIEQDLSLMRFGAAWVERLFA 196

Query: 351 AVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLV 410
             K L+  E V +F  ++  ++DL REAA+ S+   NF+    +  PK  Y      VL 
Sbjct: 197 DGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSNMLIVPKVFYDYCTSDVLT 256

Query: 411 ETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQK 470
             +  G  VS  + +L+        LA  G       +  D F HADMHPGNILV    +
Sbjct: 257 IEWMDGTPVSD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGNILVAADNR 315

Query: 471 KSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR---LSK 527
                         I LD G+   L+  D+  L   F A   RD    A   +    +  
Sbjct: 316 -------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYHRVATAHIESGWVPA 362

Query: 528 QQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTT 587
                  +A +  V E    +  P   +      + +L E  RR  V +   +  +  T 
Sbjct: 363 DTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQPQLVLLQKTL 419

Query: 588 LVLEGWQRKLDPGYNVMDTLQTLLLK 613
           L +EG  R+LDP  ++  T +  L+K
Sbjct: 420 LNIEGLGRQLDPDLDLWKTAKPFLVK 445


>gi|171464175|ref|YP_001798288.1| 2-polyprenylphenol 6-hydroxylase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171193713|gb|ACB44674.1| 2-polyprenylphenol 6-hydroxylase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 528

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 194/413 (46%), Gaps = 24/413 (5%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           TLE  GP F+K+GQ  +TR DL P D+  +L++L  + P  S   +++ IE+  G+ + E
Sbjct: 57  TLEALGPIFVKFGQVLSTRRDLLPEDIANELAKLQDQVPPFSNEESRRLIEKDLGQSIEE 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +F  F+  PVAS S+AQVH  +LR      + +   VA+KV  P +   I  D  ++ +L
Sbjct: 117 VFISFDATPVASASVAQVHFGALRGATKHPEWEGRAVAIKVLRPDILPVIEGDLALMYDL 176

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  I       + L+L E+V +F  ++  ++DL REAA+ S+    F   + +  P+  +
Sbjct: 177 AKFIEKSSEDSRRLKLRENVAEFDTYLHDELDLMREAANASQLRRQFADSQKLMIPEMYW 236

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
            L H  V+V     G  + +     +     K  LA  G       +    F HADMHPG
Sbjct: 237 DLCHTNVIVMERMYGISIGKTTALKEAGVDFKK-LASDGVEIFFTQVFEYGFFHADMHPG 295

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI++ +  +   +          I LD G+   LS++D+  L   F A   RD R  A  
Sbjct: 296 NIMISLEPETFGR---------FISLDFGVVGALSESDKNYLALNFLAFFNRDYRRVA-- 344

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVD 577
             +L  +         +EE++ A      P  D     +     + +L +  RR +V + 
Sbjct: 345 --KLHIESGWVPANTRVEELEGAVRSVCEPYFDRPLKEISLGIMLMRLFQTSRRFKVEIQ 402

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWA-KSLSY--TIDGL 627
             +  +  T L +EG  R+LDP  ++  T + +L K  W  K L +   +DGL
Sbjct: 403 PQLTLLQKTLLNIEGLARQLDPDLDLWKTAKPILEK--WVNKQLGWRGLLDGL 453


>gi|225077402|ref|ZP_03720601.1| hypothetical protein NEIFLAOT_02463 [Neisseria flavescens
           NRL30031/H210]
 gi|224951262|gb|EEG32471.1| hypothetical protein NEIFLAOT_02463 [Neisseria flavescens
           NRL30031/H210]
          Length = 503

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 179/394 (45%), Gaps = 29/394 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP FIK+GQ  +TRPDL P D   +L+ L  K P      ++  IE++ G+ ++ +
Sbjct: 58  LESLGPIFIKFGQVLSTRPDLIPHDYAFELARLQDKVPPFDAQLSRSQIEKSLGQSINTL 117

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           +  FE  PVAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   A
Sbjct: 118 YAEFETEPVASASIAQVHKARL---HSGEQ-----VAVKVLRPNLLPVIEQDLSLMRFGA 169

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF+    +  PK  Y 
Sbjct: 170 GWVERLFSDGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSNMLIVPKVFYD 229

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VL   +  G  VS  + +L+        LA  G       +  D F HADMHPGN
Sbjct: 230 YCTSNVLTIEWMDGTPVSD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGN 288

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           ILV    +              I LD G+   L+  D+  L   F A   RD R  A   
Sbjct: 289 ILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATAH 335

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +         +A +  V E    +  P   +      + +L E  RR  V +   
Sbjct: 336 IESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQPQ 392

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +  +  T L +EG  R+LDP  ++  T +  L++
Sbjct: 393 LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVR 426


>gi|171060680|ref|YP_001793029.1| 2-polyprenylphenol 6-hydroxylase [Leptothrix cholodnii SP-6]
 gi|226695732|sp|B1XWR5.1|UBIB_LEPCP RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|170778125|gb|ACB36264.1| 2-polyprenylphenol 6-hydroxylase [Leptothrix cholodnii SP-6]
          Length = 522

 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 182/394 (46%), Gaps = 27/394 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+  +L++L  + P      ++  + ++ GR + E
Sbjct: 56  ALERLGPIFVKFGQVLSTRRDLIPHDIANELAKLQDRVPPFPSDVSRAAVVQSLGRPIEE 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  PVAS SIAQVH   L   + G++     VAVKV  P V   I  D  ++ +A
Sbjct: 116 VFASFDADPVASASIAQVHFGVL---HDGRE-----VAVKVLRPNVLNIIEADLALLRVA 167

Query: 343 AK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +  + P  + LR  E V +F  ++  ++DL REAA+ ++   N      +  P+ ++
Sbjct: 168 AAWLERLSPDGRRLRPREVVAEFDNYLHDELDLGREAANAAQLRRNMGGLDLIMLPEMIW 227

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
            L    VLV     G  +S+ ++ L+        LA  G       +  D F HADMHPG
Sbjct: 228 DLSSAEVLVMERMHGVPISQ-IETLRAAGIDIPKLARDGVTIFFTQVFRDGFFHADMHPG 286

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI+V  A     +          I LD G+   L   D+  L + F A  RRD R  AE 
Sbjct: 287 NIMVSTAPATFGR---------YIALDFGIVGTLDSRDKEYLAQNFLAFFRRDYRRVAE- 336

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVD 577
              L  +         ++E++ A      P  D     +   + + +L +  RR  V + 
Sbjct: 337 ---LHIESGWVPASTRVDELEGAVRAVCEPHFDRPLKDISLGQVLLRLFQTSRRFNVEIQ 393

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 394 PQLVLLQKTLLNVEGLGRQLDPELDLWQTAKPFL 427


>gi|407645803|ref|YP_006809562.1| hypothetical protein O3I_023165 [Nocardia brasiliensis ATCC 700358]
 gi|407308687|gb|AFU02588.1| hypothetical protein O3I_023165 [Nocardia brasiliensis ATCC 700358]
          Length = 421

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 178/392 (45%), Gaps = 33/392 (8%)

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGF 287
           GP F+K GQ   TR DL P  LC +LS L         A+T   +  A+G  + ++F   
Sbjct: 46  GPTFVKAGQVLGTRRDLLPPALCDELSLLQDSVAPLDAAHTAVALTEAYGAEVDDVFASL 105

Query: 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISS 347
           +  PVASGS+A V+RA LR    GQ      VAVK+R PG+ +++  D  +I   A   +
Sbjct: 106 DTRPVASGSVASVYRARLR---SGQD-----VAVKLRRPGIEQTMSADLALIRGGAAFVA 157

Query: 348 VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP-LVHP 406
            +P  + + + E V   A  ++ Q+D  REA +L R   N      V  PK VYP    P
Sbjct: 158 RLPIFRGVPVTEVVANMADAILGQLDFEREADNLRRLRKNLSEVPRVWVPK-VYPEACRP 216

Query: 407 AVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVR 466
             +V  +  G  V    +      R +   A  G  A+ +ML VD F+H DMHPGN+   
Sbjct: 217 RCIVMEFIPGLAVD-TAEHCSPAARRR--FAASGMAAMYQMLFVDGFVHCDMHPGNL--- 270

Query: 467 VAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR-- 524
                      F     V+ LD G + +L+   R    EFF  +A   GR AAE  ++  
Sbjct: 271 ----------YFTRSAQVVVLDAGFSVQLTDRLRRLFAEFFMNMAIGRGRHAAEIVIQSA 320

Query: 525 --LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCT 582
             ++   +       + ++ E        E  L+  A    ++ +  RR  +N    +  
Sbjct: 321 AHIAADADLEGFTVRMADLVERSHGQAASEFSLIAFA---MEMFDLQRRFGINAASELVF 377

Query: 583 VMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
            +++ LV+EG  R+LDP  +  +  +  L++ 
Sbjct: 378 PLLSLLVIEGTIRELDPDMDFQEAAKPQLMRG 409


>gi|419798574|ref|ZP_14323976.1| 2-polyprenylphenol 6-hydroxylase [Neisseria sicca VK64]
 gi|385694253|gb|EIG24865.1| 2-polyprenylphenol 6-hydroxylase [Neisseria sicca VK64]
          Length = 522

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 178/394 (45%), Gaps = 29/394 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK+GQ  +TRPDL P D   +L++L  K P      ++  IE++ G+ +  +
Sbjct: 77  LENLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDAQLSRSQIEKSLGQSIETL 136

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL-A 342
           +  FE  PVAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   A
Sbjct: 137 YAEFETEPVASASIAQVHKARL---HSGEQ-----VAVKVLRPNLLPVIEQDLSLMRFGA 188

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           A +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF+    +  PK  Y 
Sbjct: 189 AWVERLFADGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSDMLIVPKVFYD 248

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VL   +  G  VS  + +L+        LA  G       +  D F HADMHPGN
Sbjct: 249 YCSSDVLTIEWMDGTPVSE-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGN 307

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           ILV    +              I LD G+   L+  D+  L   F A   RD    A   
Sbjct: 308 ILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYHRVATAH 354

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +         +A +  V E    +  P   +      + +L E  RR  V +   
Sbjct: 355 IESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQPQ 411

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 412 LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 445


>gi|347821478|ref|ZP_08874912.1| putative ubiquinone biosynthesis protein UbiB [Verminephrobacter
           aporrectodeae subsp. tuberculatae At4]
          Length = 408

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 106/306 (34%), Positives = 152/306 (49%), Gaps = 27/306 (8%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P         TIERAF R L 
Sbjct: 56  QALECLGPIFVKFGQVLSTRRDLLPADIADELARLQDRVPPFDPEIAVATIERAFRRPLE 115

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           +IF  FE  PVAS SIAQVH A+LR R   ++     VAVKV  PG+   I +D  ++ L
Sbjct: 116 QIFTRFERTPVASASIAQVHFATLRDRQGVER----EVAVKVLRPGMLPVIEKDLSLLRL 171

Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
            A  + S+    + L+  E V +F  ++  ++DL REAA+ ++   N +    V  P+  
Sbjct: 172 MAGWVESLSADGRRLKPREVVAEFDNYLHDELDLVREAANAAQLRRNMQGLDLVLVPEIF 231

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFI 454
           +    P V+V     G  +S+        ERL+ A      LA  G       +  D F 
Sbjct: 232 WDFCRPEVMVMQRMNGVPISQV-------ERLREARVDIPKLARDGVTIFFTQVFRDGFF 284

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           HADMHPGNI V +  +   +          I LD G+   L+++D+  L + F A  RRD
Sbjct: 285 HADMHPGNIQVSLEPETFGR---------YISLDFGIVGTLTESDKEYLAQNFVAFFRRD 335

Query: 515 GRTAAE 520
            +  AE
Sbjct: 336 YKRVAE 341


>gi|240014679|ref|ZP_04721592.1| putative ubiquinone biosynthesis protein UbiB [Neisseria
           gonorrhoeae DGI18]
 gi|240017126|ref|ZP_04723666.1| putative ubiquinone biosynthesis protein UbiB [Neisseria
           gonorrhoeae FA6140]
 gi|240121201|ref|ZP_04734163.1| putative ubiquinone biosynthesis protein UbiB [Neisseria
           gonorrhoeae PID24-1]
 gi|254494218|ref|ZP_05107389.1| ubiquinone biosynthesis protein [Neisseria gonorrhoeae 1291]
 gi|268595313|ref|ZP_06129480.1| ubiquinone biosynthesis protein [Neisseria gonorrhoeae 35/02]
 gi|268597347|ref|ZP_06131514.1| ubiquinone biosynthesis protein [Neisseria gonorrhoeae FA19]
 gi|268599521|ref|ZP_06133688.1| ubiquinone biosynthesis protein [Neisseria gonorrhoeae MS11]
 gi|268601869|ref|ZP_06136036.1| ubiquinone biosynthesis protein [Neisseria gonorrhoeae PID18]
 gi|268604200|ref|ZP_06138367.1| ubiquinone biosynthesis protein [Neisseria gonorrhoeae PID1]
 gi|268682659|ref|ZP_06149521.1| ubiquinone biosynthesis protein [Neisseria gonorrhoeae PID332]
 gi|268684930|ref|ZP_06151792.1| ubiquinone biosynthesis protein [Neisseria gonorrhoeae SK-92-679]
 gi|268687086|ref|ZP_06153948.1| ubiquinone biosynthesis protein [Neisseria gonorrhoeae SK-93-1035]
 gi|385336208|ref|YP_005890155.1| putative ubiquinone biosynthesis protein UbiB [Neisseria
           gonorrhoeae TCDC-NG08107]
 gi|226513258|gb|EEH62603.1| ubiquinone biosynthesis protein [Neisseria gonorrhoeae 1291]
 gi|268548702|gb|EEZ44120.1| ubiquinone biosynthesis protein [Neisseria gonorrhoeae 35/02]
 gi|268551135|gb|EEZ46154.1| ubiquinone biosynthesis protein [Neisseria gonorrhoeae FA19]
 gi|268583652|gb|EEZ48328.1| ubiquinone biosynthesis protein [Neisseria gonorrhoeae MS11]
 gi|268586000|gb|EEZ50676.1| ubiquinone biosynthesis protein [Neisseria gonorrhoeae PID18]
 gi|268588331|gb|EEZ53007.1| ubiquinone biosynthesis protein [Neisseria gonorrhoeae PID1]
 gi|268622943|gb|EEZ55343.1| ubiquinone biosynthesis protein [Neisseria gonorrhoeae PID332]
 gi|268625214|gb|EEZ57614.1| ubiquinone biosynthesis protein [Neisseria gonorrhoeae SK-92-679]
 gi|268627370|gb|EEZ59770.1| ubiquinone biosynthesis protein [Neisseria gonorrhoeae SK-93-1035]
 gi|317164751|gb|ADV08292.1| putative ubiquinone biosynthesis protein UbiB [Neisseria
           gonorrhoeae TCDC-NG08107]
          Length = 503

 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 181/395 (45%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G+ + +
Sbjct: 57  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQPIEK 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL- 341
           ++  FE  PVAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 117 LYAEFETEPVASASIAQVHKARL---HSGER-----VAVKVLRPNLLPLIEQDLSLMRFG 168

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +  +    K L+  E V +F  ++  ++DL REAA+  +   NF+    +  PK  Y
Sbjct: 169 AAWVERLFSDGKRLKPREVVAEFDKYLHDELDLMREAANAGQLGRNFQNSNMLIVPKVFY 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  VS  + +L+        LA  G       +  D F HADMHPG
Sbjct: 229 DYCTSDVLTIEWMDGTPVSD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD R  A  
Sbjct: 288 NILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA 334

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A +  V E    +  P   +      + +L E  RR  V +  
Sbjct: 335 HVESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQP 391

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 392 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|392952228|ref|ZP_10317783.1| 2-polyprenylphenol 6-hydroxylase [Hydrocarboniphaga effusa AP103]
 gi|391861190|gb|EIT71718.1| 2-polyprenylphenol 6-hydroxylase [Hydrocarboniphaga effusa AP103]
          Length = 541

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 186/401 (46%), Gaps = 21/401 (5%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP F+K GQ  +TRPD+ P D+  +LS L  + P  S    ++ +E+A G+ + E
Sbjct: 44  ALQELGPIFVKLGQALSTRPDVLPPDIAIELSLLQDRVPPFSGDEARRIVEQALGKPIDE 103

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F+ F+  P+AS SIAQVH A  R +  G K     V VKV  PG+ ++I  D  ++ L 
Sbjct: 104 LFNEFDSTPLASASIAQVHTA--RLKPTGPKDPGFEVIVKVLRPGIEKTIHDDVQLMYLL 161

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A ++    A  + +R    V ++   +  ++DL REA + ++   N+   + +  P   +
Sbjct: 162 ADLAERFNASARRVRPRAIVAEYEKIVFDELDLMREAGNAAQLRRNWLGSELIYHPAVFF 221

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VLV    +G  + R +D L+        L   G     K    DNF HADMHPG
Sbjct: 222 DYTRANVLVMERIRGISI-RELDRLRAMGVDFKVLGERGVEIFFKQTFRDNFFHADMHPG 280

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V  +  K+         P  I +D G+  +LS  D+  L E   A   RD R  AE 
Sbjct: 281 NIFVDASNVKN---------PSYIAVDFGIVGQLSVQDQRYLAENLLAFFNRDYRRVAEL 331

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            L    +  +    + +A I  V E    +  P  ++      + +L +  RR    V  
Sbjct: 332 HLESEWVPSETRLEDFEAAIRTVCE--PIFQKPLSEISF-GVFLLRLFQVARRFNYQVQP 388

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
            +  +  T L +EG  R+L P  ++  T + +L   DW +S
Sbjct: 389 QLVLLQKTLLNIEGLGRQLYPELDLWKTAKPIL--EDWMRS 427


>gi|257885747|ref|ZP_05665400.1| ABC1 family protein [Enterococcus faecium 1,231,501]
 gi|257821603|gb|EEV48733.1| ABC1 family protein [Enterococcus faecium 1,231,501]
          Length = 581

 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 180/419 (42%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 35  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 94

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+            V VK++HP + E IR D  + 
Sbjct: 95  LSDIFDDFSKSPFASASMGQAHRAKLK--------NGDAVVVKIQHPNIAEEIRLDLQLF 146

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 147 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 206

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++     E         +LK  +A +     +K +  
Sbjct: 207 YDAFCSKKVIVMEEMSGKNLNHLMNAENKTETFITGIQNKQLKQEVAKLLVENFMKQVFD 266

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V     Q ++SQK             FR+         P+ + +
Sbjct: 267 DGFFHADPHPGNLLFHVLTKEEQTRASQKTETVHEKEFGSFTFRASTSTEDPVAPYTVNY 326

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 327 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 386

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 387 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 445


>gi|425055859|ref|ZP_18459323.1| ABC1 family protein [Enterococcus faecium 505]
 gi|403033016|gb|EJY44549.1| ABC1 family protein [Enterococcus faecium 505]
          Length = 583

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 180/419 (42%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 37  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 96

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +S+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 97  VSDIFDDFSKSPFASASMGQAHRAKLK---SGD-----AVVVKIQHPNIAEEIRLDLQLF 148

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 149 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 208

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++   G E         +LK  +A +     +K +  
Sbjct: 209 YDAFCSKKVIVMEEMSGKNLNHLMNAENGTETFITGIQNKQLKQEVAKLLVENFMKQVFD 268

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKR---------------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V  K+   +                 FR+         P+ + +
Sbjct: 269 DGFFHADPHPGNLLFHVLTKEEQTRARRTAETVHEKEFGPFAFRASTSIEDPVAPYTVNY 328

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 329 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGLFDESRFHQELTSFLE 388

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E   Q++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 389 QYYDSPIDEINLQEVFAQVVMICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 447


>gi|220933253|ref|YP_002512152.1| 2-polyprenylphenol 6-hydroxylase [Thioalkalivibrio sulfidophilus
           HL-EbGr7]
 gi|219994563|gb|ACL71165.1| 2-polyprenylphenol 6-hydroxylase [Thioalkalivibrio sulfidophilus
           HL-EbGr7]
          Length = 558

 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 184/393 (46%), Gaps = 29/393 (7%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           + +TLE  GP FIK+GQ  +TR DL P D+  +LS+L  + P  + +  +  IER+  R 
Sbjct: 64  IRKTLEDLGPIFIKFGQMLSTRRDLLPDDIAAELSKLQDRVPPFAVSEARAIIERSLERP 123

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +  +F  F++ P+AS SIAQVH A L   + G++     V VKV  P + + IRRD  ++
Sbjct: 124 IETLFARFDDTPIASASIAQVHGARL---HDGRE-----VVVKVVRPLIQKVIRRDLELM 175

Query: 340 NLAAKISSVI-PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
            + A+++    P  + LR  E VQ++   ++ ++DL REAA+ ++   NF   + +  P+
Sbjct: 176 YILAELAERYWPEGRRLRPVEVVQEYEKTIIDELDLVREAANATQLRRNFAGSRLLYIPE 235

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +      V+V     G  V+  +D L+        L+  G       +   NF HADM
Sbjct: 236 VYWDYTRRDVMVMERISGIPVAD-IDSLRARGVNMQLLSERGVEIFFTQVFRHNFFHADM 294

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI V     +          P  + +D G+   LS  D+  L E F A   RD R  
Sbjct: 295 HPGNIFVNAEHPED---------PSYLAVDFGIVGTLSPMDQRYLAENFYAFFNRDYRRV 345

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHR 573
           AE    L  +         ++E + A        +  P  D+      + +L +  RR  
Sbjct: 346 AE----LHVESGWVPADTRVDEFESAIRSVCEPIFQKPLKDISF-GHVLLRLFQTARRFH 400

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           + V   +  +  T L +EG  R+L P  ++  T
Sbjct: 401 MQVQPQLVLLQKTLLNIEGLGRQLYPDLDLWKT 433


>gi|257899459|ref|ZP_05679112.1| ABC1 family protein [Enterococcus faecium Com15]
 gi|257837371|gb|EEV62445.1| ABC1 family protein [Enterococcus faecium Com15]
          Length = 581

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 180/419 (42%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 35  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 94

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +S+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 95  VSDIFDDFSKSPFASASMGQAHRAKLK---SGD-----AVVVKIQHPNIAEEIRLDLQLF 146

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 147 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 206

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++   G E         +LK  +A +     +K +  
Sbjct: 207 YDAFCSKKVIVMEEMSGKNLNHLMNAENGTETFITGIQNKQLKQEVAKLLVENFMKQVFD 266

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKR---------------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V  K+   +                 FR+         P+ + +
Sbjct: 267 DGFFHADPHPGNLLFHVLTKEEQTRARRTAETVHEKEFGPFAFRASTSTEDPVAPYTVNY 326

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 327 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGLFDESRFHQELTSFLE 386

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E   Q++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 387 QYYDSPIDEINLQEVFAQVVMICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 445


>gi|194099215|ref|YP_002002306.1| putative ubiquinone biosynthesis protein UbiB [Neisseria
           gonorrhoeae NCCP11945]
 gi|193934505|gb|ACF30329.1| putative ubiquinone biosynthesis protein UbiB [Neisseria
           gonorrhoeae NCCP11945]
          Length = 503

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 181/395 (45%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G+ + +
Sbjct: 57  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQPIEK 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL- 341
           ++  FE  PVAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 117 LYAEFETEPVASASIAQVHKARL---HSGER-----VAVKVLRPNLLPLIEQDLSLMRFG 168

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +  +    K L+  E V +F  ++  ++DL REAA+  +   NF+    +  PK  Y
Sbjct: 169 AAWVERLFSDGKRLKPREVVAEFDKYLHDELDLMREAANAGQLGRNFQNSNMLIVPKVFY 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  VS  + +L+        LA  G       +  D F HADMHPG
Sbjct: 229 DYCTSDVLTIEWMDGTPVSD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD R  A  
Sbjct: 288 NILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA 334

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A +  V E    +  P   +      + +L E  RR  V +  
Sbjct: 335 HVESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVNRRFNVEIQP 391

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 392 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|404493995|ref|YP_006718101.1| quinone biosynthesis kinase AarF [Pelobacter carbinolicus DSM 2380]
 gi|77546019|gb|ABA89581.1| quinone biosynthesis kinase AarF, putative [Pelobacter carbinolicus
           DSM 2380]
          Length = 563

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 175/390 (44%), Gaps = 31/390 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           +E  GP FIK+GQ  +TRPD+ P +   + S L    P   FA   + I +  G+ L  +
Sbjct: 71  MEELGPTFIKFGQLLSTRPDILPPEYITEFSRLQDDLPPVPFAQIHQQITKELGQPLERL 130

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           F   E  P+A+ SIAQVH A L     G+K     VAVK+R P +   I  D  ++++LA
Sbjct: 131 FSHLEMTPLATASIAQVHHARL---LDGKK-----VAVKIRRPDIEHIIATDLDILMSLA 182

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                 +PA+        V++F   +  +++  RE   L RF  NF        P+    
Sbjct: 183 HLAEHHLPALHIYNPVALVKEFRRSVQRELNFTREGHTLERFADNFAEDSTFHVPRMYRE 242

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
           L    VL   + +G  VS +   L+      S +AH G  ALLK +L+    H D HPGN
Sbjct: 243 LSGETVLTMEFIEGIKVSDFA-RLRNAGYDLSTIAHHGADALLKQVLIHGLFHGDPHPGN 301

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V                P V FLD GM   L +T +  L++    +  RD        
Sbjct: 302 IFV-------------MPGPVVCFLDYGMVGRLDRTLKYQLIDLLFGILERDVEKVTRLL 348

Query: 523 LRLSKQQNCP---NPKAFIEE-VDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
           L   +    P   + K  + + +D+   ++  P  + +H    +  L+    +  ++V  
Sbjct: 349 LESGEMDEEPLLTDLKKVVSDFIDD---YYEVPLQE-IHTGHLLTDLINIFVQFHISVPP 404

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
           ++  +    + +EG  R+LDPG+N++  L+
Sbjct: 405 DLLILARALITMEGIGRQLDPGFNMVGHLK 434


>gi|257887889|ref|ZP_05667542.1| ABC1 family protein [Enterococcus faecium 1,141,733]
 gi|431036549|ref|ZP_19492319.1| ubiquinone biosynthesis protein [Enterococcus faecium E1590]
 gi|431763084|ref|ZP_19551637.1| ubiquinone biosynthesis protein [Enterococcus faecium E3548]
 gi|257823943|gb|EEV50875.1| ABC1 family protein [Enterococcus faecium 1,141,733]
 gi|430563089|gb|ELB02320.1| ubiquinone biosynthesis protein [Enterococcus faecium E1590]
 gi|430622778|gb|ELB59488.1| ubiquinone biosynthesis protein [Enterococcus faecium E3548]
          Length = 581

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 180/419 (42%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 35  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 94

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +S+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 95  VSDIFDDFSKSPFASASMGQAHRAKLK---SGD-----AVVVKIQHPNIAEEIRLDLQLF 146

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 147 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 206

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++   G E         +LK  +A +     +K +  
Sbjct: 207 YDAFCSKKVIVMEEMSGKNLNHLMNAENGTETFITGIQNKQLKQEVAKLLVENFMKQVFD 266

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKR---------------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V  K+   +                 FR+         P+ + +
Sbjct: 267 DGFFHADPHPGNLLFHVLTKEEQTRARRTTETVHEKEFGPFAFRASTSIENPVAPYTVNY 326

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 327 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGLFDESRFHQELTSFLE 386

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E   Q++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 387 QYYDSPIDEINLQEVFAQVVMICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 445


>gi|374580082|ref|ZP_09653176.1| putative unusual protein kinase [Desulfosporosinus youngiae DSM
           17734]
 gi|374416164|gb|EHQ88599.1| putative unusual protein kinase [Desulfosporosinus youngiae DSM
           17734]
          Length = 559

 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 180/386 (46%), Gaps = 26/386 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            +E  GP +IK GQ A+TR D+ P  +  +L +L    P  SF    + IE   G  L E
Sbjct: 62  VIEELGPTYIKIGQIASTRADIIPPGILNELEKLQENVPSFSFEEVSEIIEEELGSPLEE 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
           IF  F+   +A+ SI QVHRA+L  R  G+     +VAVKV+ P +   I  D  ++++L
Sbjct: 122 IFSSFDANVMAAASIGQVHRATL--RSTGE-----LVAVKVQRPQIKGMIETDLEILLDL 174

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A    + +  ++ L+L + V++FA  + S++D   E  +  +    F+  K V  P   +
Sbjct: 175 AGLAENRMKRMERLQLRDVVEEFAKSLRSELDYTIEGRNAEKIAKQFKNDKSVHIPSIYW 234

Query: 402 PLVHPAVLVETYEQGECVSRY-VDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                 VL   + +G  ++++   E +G++     LA     AL + +L++ F HAD HP
Sbjct: 235 DYSTKKVLTMEFVEGLRLNQFEALEKKGYDH--KVLAEQLVQALFQQILIEGFFHADPHP 292

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVI-FLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           GN              LF  +  VI F+D GM   L+   + N      A+ R+D     
Sbjct: 293 GN--------------LFILQGGVISFIDFGMVGRLTLDMKHNFASLIIAMMRQDTDRMI 338

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +  LR+       N  + + +VDE    +       +   E +  L E   RH++ +  +
Sbjct: 339 KAVLRIGIVPEDVNLPSLVNDVDELREKYMDVPLSRMSLGEAISDLFEVAFRHQIRIPSD 398

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMD 605
              V    L++EG   KLDP  ++MD
Sbjct: 399 FTMVAKCLLIMEGIVEKLDPNLSIMD 424


>gi|347541129|ref|YP_004848555.1| 2-polyprenylphenol 6-hydroxylase [Pseudogulbenkiania sp. NH8B]
 gi|345644308|dbj|BAK78141.1| 2-polyprenylphenol 6-hydroxylase [Pseudogulbenkiania sp. NH8B]
          Length = 508

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 179/398 (44%), Gaps = 24/398 (6%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V   LE+ GP F+K+GQ  +TR DL P D   +L+ L  K P    A  +K IE++FGR 
Sbjct: 52  VREALESLGPIFVKFGQVLSTRRDLLPPDYADELARLQDKVPPFDGALARKVIEQSFGRT 111

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +  ++  F + PVAS S+AQVH+A L+    G K +   VAVKV  PG+   I +D  ++
Sbjct: 112 VDSLYADFNDVPVASASVAQVHKAWLKLP-DGSKGRE--VAVKVLRPGIQPVIEQDLALM 168

Query: 340 -NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA  +       K L+  E V +F  ++  ++D+  EAA+ S+   NF     +  P+
Sbjct: 169 RTLAGWVERFFVDGKRLKPREVVGEFDKYLHDELDMMHEAANASQLRRNFTGSDQLIVPE 228

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             Y      VL   +  G  +S+ ++ L+        L+  G       +    F HADM
Sbjct: 229 VFYDYTTREVLTLEWMHGTPISQ-IERLREQGIDLKKLSRFGVEIFFTQVFRHGFFHADM 287

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI V    +              I LD G+   L+  D+  L   F A   RD    
Sbjct: 288 HPGNIFVAPDGR-------------YIALDFGIVGSLTDVDKHYLAVNFLAFFNRDYHRV 334

Query: 519 AECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
           A   +    + K       +A +  V E    +  P  ++      + +L E  RR  V 
Sbjct: 335 ATAHIESGWVPKDTRAEELEAAVRTVCE--PIFEKPLSEISF-GLVLLRLFETSRRFNVE 391

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +   +  +  T L +EG  R+LDP  ++ DT +  L K
Sbjct: 392 IQPQLVLLQKTLLNIEGLGRQLDPHLDLWDTAKPFLTK 429


>gi|402572025|ref|YP_006621368.1| unusual protein kinase [Desulfosporosinus meridiei DSM 13257]
 gi|402253222|gb|AFQ43497.1| putative unusual protein kinase [Desulfosporosinus meridiei DSM
           13257]
          Length = 559

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 178/385 (46%), Gaps = 24/385 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            +E  GP +IK GQ A+TR D+FP+++  +L +L    P  SF      IE   G  LS+
Sbjct: 62  VIEELGPTYIKIGQIASTRADIFPQEILCELEKLQENVPSFSFEEVTTIIEEELGSPLSD 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
           IF  F++  +A+ SI QVHRA  R R  G++     VAVKV+ P +   I  D  ++++L
Sbjct: 122 IFSSFDKTVIAAASIGQVHRA--RLRSTGEQ-----VAVKVQRPRIKTMIETDLEILLDL 174

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A      +  ++ L+L + V++FA  + +++D + E  +  +    F+  K V  P   +
Sbjct: 175 ATLAEHRMKRMERLQLRDVVEEFAKSLRNELDYSIEGRNAEKIAKQFKNNKGVHIPSIYW 234

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   + +G  ++++ + L+ +      LA     AL   +L+  F HAD HPG
Sbjct: 235 DYSTRKVLTLEFVEGLRLNQF-EALEQNGYDHKILAEKLVQALFHQILIAGFFHADPHPG 293

Query: 462 NILVRVAQKKSSQKRLFRSKPHVI-FLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           NI              F  K  VI F+D GM   L+   + N      A+ R++     +
Sbjct: 294 NI--------------FLLKGGVISFIDFGMVGRLTLDMKHNFASLIIAMMRQNTEAMIK 339

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
             LR+       N      +VDE    +       +   E +  L E   RH++ +  + 
Sbjct: 340 AVLRIGIVPEDVNLLLLSNDVDELREKYMDVPMSRISLGEAISDLFEVAFRHQIRIPSDF 399

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMD 605
             V    L+LEG   KLDP  ++MD
Sbjct: 400 TMVAKCLLILEGIVEKLDPQLSIMD 424


>gi|377819743|ref|YP_004976114.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia sp. YI23]
 gi|357934578|gb|AET88137.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia sp. YI23]
          Length = 524

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 185/394 (46%), Gaps = 25/394 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL P D+  +L++L  + P    A     IE++ G  +  +
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLPVDIADELAKLQDRVPPFDSAVAVSIIEKSLGAPIDVL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKV-KPIVVAVKVRHPGVGESIRRDFVII-NL 341
           FD FE  PVAS SIAQVH A ++    G+   KP  VAVKV  PG+   I  D  ++ ++
Sbjct: 116 FDDFERVPVASASIAQVHFAKIK---TGEHAGKP--VAVKVLRPGMLPVIDSDLALLRDI 170

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A     +    + L+  E V +F  ++  ++DL REAA+ S+   NF+    +  P+  +
Sbjct: 171 AIWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFQGLDLLLVPEMYW 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
            L  P VLV     G  +S+ VD L+        LA  G       +  D F HADMHPG
Sbjct: 231 DLSAPTVLVMERMVGVPISQ-VDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V +      +          I LD G+   LS  D+  L + F A  +RD    A  
Sbjct: 290 NIQVSLDPATFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA-- 338

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVD 577
           TL L      P+ +  +EE++ +      P  D     +   + + +L    RR  V + 
Sbjct: 339 TLHLESGWVPPSTR--VEELESSIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQ 396

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 397 PQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|227545692|ref|ZP_03975741.1| possible ubiquinone biosynthesis protein UbiB [Bifidobacterium
           longum subsp. longum ATCC 55813]
 gi|227213808|gb|EEI81647.1| possible ubiquinone biosynthesis protein UbiB [Bifidobacterium
           longum subsp. infantis ATCC 55813]
          Length = 606

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 184/391 (47%), Gaps = 37/391 (9%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  GP F+K GQ  + R ++ P+  C +L++L + A    ++     +   +GR   E+F
Sbjct: 111 EALGPTFVKVGQILSMRSEILPQSFCDELAKLRADADPMPYSTVLDVLAAEYGRPADEVF 170

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
              +  P+ S S+AQVHRA+L+    G+      VA+KV+ PGV E++ +D  I+   AK
Sbjct: 171 AHIDPKPLGSASLAQVHRATLK---TGED-----VAIKVQRPGVRETMAQDVSIMRSIAK 222

Query: 345 ISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
           +++ VI   + + L   V++      S+ D   EA +L+ F     R+K +  P     L
Sbjct: 223 VATKVIRTSQIVDLKGVVEELWDTFESETDFLIEARNLAEFKRFAARFKYMDCPTAYTEL 282

Query: 404 VHPAVLVETYEQGECVS---RYVDELQGHERLKSALAHIGTHAL---LKMLLVDNFIHAD 457
               V+V  Y  G  VS   R VD   G++     L  IGT  +      +L D F HAD
Sbjct: 283 CTEHVVVMEYIDGISVSHPGRLVD--AGYD-----LKEIGTKLVDNYATQILDDGFFHAD 335

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGNI++R  Q              ++ +D+GMT  L +  R  L E   AVA++D   
Sbjct: 336 PHPGNIIIRGGQ--------------IVLIDLGMTGRLDQRTRAVLKEMIFAVAKQDSPA 381

Query: 518 AAECTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
            AE  LR +  +  P    A + ++D     +GT +   +  A  +  L +   RH + V
Sbjct: 382 LAEGLLRFAGTEADPEDYPALLADLDVIVKEFGTVDLAELDIAAFLTALTQMAGRHNIEV 441

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
              V TV    + LEG   +  P  N+++ +
Sbjct: 442 PSTVTTVGRALVTLEGLLDEFIPDVNMIEII 472


>gi|254804442|ref|YP_003082663.1| putative ubiquinone biosynthesis protein UbiB [Neisseria
           meningitidis alpha14]
 gi|254667984|emb|CBA04290.1| putative ubiquinone biosynthesis protein [Neisseria meningitidis
           alpha14]
          Length = 503

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 181/395 (45%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G+ + +
Sbjct: 57  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQPIEK 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL- 341
           ++  FE  PVAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 117 LYAEFETEPVASASIAQVHKARL---HSGER-----VAVKVLRPNLLPLIEQDLSLMRFG 168

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +  +    + L+  E V +F  ++  ++DL REAA+  +   NF+    +  PK  Y
Sbjct: 169 AAWVERLFADGRRLKPREVVAEFDKYLHDELDLMREAANAGQLGRNFQNSDMLIVPKVFY 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  VS  + +L+        LA  G       +  D F HADMHPG
Sbjct: 229 DYCTSDVLTIEWMDGTPVSD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD R  A  
Sbjct: 288 NILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA 334

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A +  V E    +  P   +      + +L E  RR  V +  
Sbjct: 335 HIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQP 391

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 392 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|430853178|ref|ZP_19470908.1| ubiquinone biosynthesis protein [Enterococcus faecium E1258]
 gi|430541000|gb|ELA81177.1| ubiquinone biosynthesis protein [Enterococcus faecium E1258]
          Length = 581

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 181/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 35  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 94

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 95  LSDIFDDFSKSPFASASMGQAHRAKLK---NGDS-----VVVKIQHPNIAEEIRLDLQLF 146

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 147 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 206

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++     E         +LK  +A +     +K +  
Sbjct: 207 YDAFCSKKVIVMEEMSGKNLNHLMNAENKTETFITGIQNKQLKQEVAKLLVENFMKQVFD 266

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V     Q ++SQK             FR+         P+ + +
Sbjct: 267 DGFFHADPHPGNLLFHVLTKEEQTRASQKTETVHEKEFGSFTFRASTSTEDPVAPYTVNY 326

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 327 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 386

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 387 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 445


>gi|77165808|ref|YP_344333.1| 2-polyprenylphenol 6-hydroxylase [Nitrosococcus oceani ATCC 19707]
 gi|254433989|ref|ZP_05047497.1| 2-polyprenylphenol 6-hydroxylase [Nitrosococcus oceani AFC27]
 gi|76884122|gb|ABA58803.1| 2-octaprenylphenol hydroxylase [Nitrosococcus oceani ATCC 19707]
 gi|207090322|gb|EDZ67593.1| 2-polyprenylphenol 6-hydroxylase [Nitrosococcus oceani AFC27]
          Length = 557

 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 181/400 (45%), Gaps = 33/400 (8%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           + RTLE  GP F+K+GQ  +TR DL   D+ + L+ L  +         K+ IE A+G+R
Sbjct: 59  IRRTLEDLGPIFVKFGQLLSTRRDLLADDIAEGLTLLQDQVAPFPSEKAKEIIETAYGQR 118

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD---- 335
           LSE+F  F+E P+AS SIAQV+ A L   + G      +V VKV  PG+   I+ D    
Sbjct: 119 LSEVFASFDEKPLASASIAQVYAAQL---HDGS-----MVVVKVVRPGIKRVIQGDVDLL 170

Query: 336 FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS 395
           +++ NLA +  S  P    LR  E V +    +  ++D+ RE A  S+   NF     + 
Sbjct: 171 YMLANLAERYWSEGPR---LRPREIVAELEKNLYDELDMLREGASASQLRRNFTGSNKLY 227

Query: 396 FPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIH 455
            P   +    P VLV    QG  ++  +DELQ +      LA  G       +   NF H
Sbjct: 228 VPLVHWHYTRPNVLVMERVQGIPINN-IDELQRYGINFKRLAETGVEIFFTQVFRHNFFH 286

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
           ADMHPGNILV     ++         P+ I LD G+   L   D+  L E F A    D 
Sbjct: 287 ADMHPGNILVSTENPQN---------PNYIALDFGIMGTLGPEDQRYLAENFLAFFNHDY 337

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRR 571
           R  AE    L            ++E + A      P  D     +   + + +L +  RR
Sbjct: 338 RRVAE----LHVDAGWVPAGTRVDEFESAIRSVCEPIFDRPLKEISFGQLLIRLFQTARR 393

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             + +   +  +  T L +EG  R L P  ++  T + +L
Sbjct: 394 FHMEIQPQLVLLQKTLLNIEGLGRVLYPDLDLWQTAKPIL 433


>gi|390934793|ref|YP_006392298.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacterium
           saccharolyticum JW/SL-YS485]
 gi|389570294|gb|AFK86699.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacterium
           saccharolyticum JW/SL-YS485]
          Length = 556

 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 189/411 (45%), Gaps = 41/411 (9%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           TLE  GP F+K GQ  +TRPDL P D+  +LS+L    P   F   ++ +E   G  +S 
Sbjct: 62  TLEELGPTFVKMGQLLSTRPDLLPHDVINELSKLQDDVPPVEFDTMRQIVEDELGDEISN 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F++ P+AS SI QV++A  R    G       V VKV+ PGV E I  D +I+   
Sbjct: 122 LFLSFDKEPIASASIGQVYKAVTR---EGND-----VVVKVQRPGVYEKITADIIILKTI 173

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           AKI +       +   + V + +  +++++D   E  +  +F  NF     V  PK  + 
Sbjct: 174 AKILNERLTDSPVDFLDVVNELSESLLNELDYTLEGNNADKFRENFINEPYVYIPKIHWE 233

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIHA 456
                VL   Y  G  V       +  E+L+ +      +A+ G  ++   + V  F H 
Sbjct: 234 YTTKKVLTMEYIDGISV-------KNKEKLRHSGFDLKKIAYNGAMSIFMQIFVYGFFHG 286

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           D HPGNIL+R   K S             ++D G+   + +++R  +VE FKA    D  
Sbjct: 287 DPHPGNILIRRDGKLS-------------YIDFGIVGYIDRSNREMIVELFKAFVDNDTD 333

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
                   +   ++  N +    ++    + F+ TP  + ++  +  +++   + ++++ 
Sbjct: 334 EVVSILTDMDAIRDGVNIRHLKYDLSGIISYFYNTPLKN-ININDSAKKITAIIYKYKLI 392

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA-----DWAKSLS 621
           +      ++ +   +EG  ++LDP +++ D  +  + K      ++AK+LS
Sbjct: 393 MPAEFTLLLKSLATIEGVGKELDPDFSISDIAKDFVKKIYISNFNFAKTLS 443


>gi|421567007|ref|ZP_16012745.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM3001]
 gi|402344417|gb|EJU79555.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM3001]
          Length = 503

 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 184/400 (46%), Gaps = 30/400 (7%)

Query: 219 VVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG 277
           V LR  LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G
Sbjct: 52  VCLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLG 111

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
           + + +++  FE  P+AS SIAQVH+A L   + G++     VAVKV  P +   I +D  
Sbjct: 112 QPIEKLYAEFETEPIASASIAQVHKARL---HSGER-----VAVKVLRPNLLPLIEQDLS 163

Query: 338 IINL-AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF 396
           ++   AA +  +    + L+  E V +F  ++  ++DL REAA+  +   NF+    +  
Sbjct: 164 LMRFGAAWVERLFADGRRLKPREVVAEFDKYLHDELDLMREAANAGQLGRNFQNSDMLIV 223

Query: 397 PKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHA 456
           PK  Y      VL   +  G  VS  + +L+        LA  G       +  D F HA
Sbjct: 224 PKVFYDYCTSDVLTIEWMDGTPVSD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHA 282

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNILV    +              I LD G+   L+  D+  L   F A   RD R
Sbjct: 283 DMHPGNILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYR 329

Query: 517 TAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
             A   +    +         +A +  V E    +  P   +      + +L E  RR  
Sbjct: 330 RVATAHIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFN 386

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           V +   +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 387 VEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|374294837|ref|YP_005045028.1| putative unusual protein kinase [Clostridium clariflavum DSM 19732]
 gi|359824331|gb|AEV67104.1| putative unusual protein kinase [Clostridium clariflavum DSM 19732]
          Length = 560

 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 155/324 (47%), Gaps = 29/324 (8%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           +LE  GP F+K GQ  +T+ D+ PRD+ ++L +L S     S+   K  IE  F   L  
Sbjct: 62  SLEELGPTFVKIGQILSTQVDIVPRDIVEELKKLQSSVQPFSYNEAKSVIESEFEDTLEN 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           IF  F + P+AS SI+QVH A L     G+K     VAVKV+ PG+ + I +D  I+ +L
Sbjct: 122 IFKEFSQEPIASASISQVHYAVLN---SGEK-----VAVKVQRPGIEKVISQDLNILRDL 173

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  + +     K       V +F   + +++D  RE  +   F  NF + K V  P+  +
Sbjct: 174 AYFVDNHTKFGKIYDFSSMVNEFEYTIKNELDFTREGENADTFRDNFSKDKVVKVPEVNW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHER---LKSALAHIGTHALLKMLLVDNFIHADM 458
                 VL   Y +G      +D+ +G E+    K   A     +L   +L D F HAD 
Sbjct: 234 TYTSRRVLTMEYIEGIG----IDDHEGLEKDGINKKETAKRIAESLCNQILRDGFFHADP 289

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI V                  V+FLD+GM   +S++ R  + + F AVA +D R A
Sbjct: 290 HPGNIKV-------------LKDGTVVFLDLGMVGRVSESRRKIISKLFVAVANKDARRA 336

Query: 519 AECTLRLSKQQNCPNPKAFIEEVD 542
           A   + L    +  N K F ++VD
Sbjct: 337 ARAVIELDAMYDKKNIKKFEQDVD 360


>gi|348589601|ref|YP_004874063.1| Ubiquinone biosynthesis monooxygenase UbiB [Taylorella
           asinigenitalis MCE3]
 gi|347973505|gb|AEP36040.1| Ubiquinone biosynthesis monooxygenase UbiB [Taylorella
           asinigenitalis MCE3]
          Length = 487

 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 189/396 (47%), Gaps = 30/396 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK+GQ  +TR D+ P+D+  +L  L  + P          IE  FG+ + E+
Sbjct: 31  LEELGPIFIKFGQVLSTRRDIVPQDIADELQLLQDRVPPFPSKEAVSIIESTFGKSVDEL 90

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F  F + P AS S+AQVH A+L   + G++     VAVK+  P + + I +D +++ + A
Sbjct: 91  FATFNKEPCASASVAQVHEATL---HNGRR-----VAVKILRPEMQKVIEKDLLLLHSFA 142

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFR---RWKDVSFPKP 399
             I   +P  K L+  E + +F  ++  ++DL  EAA+ S+   NF+   R   +  P+ 
Sbjct: 143 GFIQRFVPDGKRLKPKEVIAEFDQYLHDELDLQIEAANCSQLRRNFKKKGRENLLLIPEV 202

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
            +   +  V    + +G  +++    ++    +K  LA +G       +  D F HADMH
Sbjct: 203 HWDYSNSKVFTMDWMEGIPIAQIDSVIEAGVDIKK-LARMGVEIFFMQVFEDGFFHADMH 261

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGNI + V  +   Q          + LD G+   LS  D+  L + F A  +RD R  A
Sbjct: 262 PGNIFISVNPQTFGQ---------YVALDFGIVGSLSDFDKNYLAQNFLAFFQRDYRRVA 312

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVN 575
           +  L +  Q   PN +   E+++ A      P  D     +     +++L +  +R  V+
Sbjct: 313 Q--LHIESQWVPPNTRE--EQLEAAIRTVCEPYFDRPISEISLGNVLKRLFQISKRFHVS 368

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 369 IQPQLVLLQKTLLNVEGMGRELDPDLDLWSTAKPFL 404


>gi|344343744|ref|ZP_08774611.1| ubiquinone biosynthesis protein ubiB [Marichromatium purpuratum
           984]
 gi|343804728|gb|EGV22627.1| ubiquinone biosynthesis protein ubiB [Marichromatium purpuratum
           984]
          Length = 549

 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 185/405 (45%), Gaps = 33/405 (8%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +TLE  GP F+K+GQ  +TR DL P DL  +L+ L  + P       +  IERA+G  
Sbjct: 58  VRQTLEDLGPIFVKFGQILSTRRDLLPDDLAVELARLQDRVPPFGGDQARALIERAWGCP 117

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VI 338
           + ++ D F+  P+AS SIAQVH A L+    G++     V VKV  PG+  +IR+D  ++
Sbjct: 118 IEDVLDQFDPEPLASASIAQVHTARLK---DGRE-----VVVKVLRPGIERTIRQDLGLM 169

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA       P  + LR  E V+++   +  ++DL REAA+ S    N++  + +  P+
Sbjct: 170 FTLAQLAERYWPDGRRLRPIEVVREYEKTIFDELDLQREAANASHLRRNWQGSEMLYIPE 229

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +    P V+V     G  V   V+E++        L   G       +  DNF HADM
Sbjct: 230 VFWDWTRPNVMVMERIYGTPVGN-VEEIKAQGVSMKQLGERGVEIFFTQVFRDNFFHADM 288

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI V  + +              I +D G+   L+  D+  L E   A   RD R  
Sbjct: 289 HPGNIFVEPSGR-------------YISIDFGIVGTLTTEDQRYLAENLLAFFERDYRRV 335

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTP--EGDL--VHPAECMQQLLEKVRRHRV 574
           AE    L  +     P   ++E + A      P  E  L  +     + +L +  RR  +
Sbjct: 336 AE----LHVESGWVPPGTRVDEFESAIRTVSEPIFEKPLAEISFGHFLVRLFQTARRFDM 391

Query: 575 NVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
            +   +  +  T L +EG  R+L P  ++  T +  + +  W K 
Sbjct: 392 EIQPQLVLLEKTLLNIEGLGRQLYPELDLWSTAKPFMER--WMKE 434


>gi|421562781|ref|ZP_16008604.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM2795]
 gi|421906368|ref|ZP_16336265.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis alpha704]
 gi|393292499|emb|CCI72193.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis alpha704]
 gi|402342165|gb|EJU77334.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM2795]
          Length = 503

 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 180/395 (45%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G+ + +
Sbjct: 57  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQPIEK 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           ++  FE  PVAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 117 LYAEFETDPVASASIAQVHKARL---HSGER-----VAVKVLRPNLLPLIEQDLSLMRFG 168

Query: 343 AK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +  +    + L+  E V +F  ++  ++DL REAA+  +   NF+    +  PK  Y
Sbjct: 169 ATWVERLFSDGRRLKPREVVAEFDKYLHDELDLMREAANAGQLGRNFQNSNMLIVPKVFY 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  VS  + +L+        LA  G       +  D F HADMHPG
Sbjct: 229 DYCTSDVLTIEWMDGTPVSD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD R  A  
Sbjct: 288 NILVAADNR-------------YIALDFGIVGTLTDFDKRYLAINFLAFFNRDYRRVATA 334

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A +  V E    +  P   +      + +L E  RR  V +  
Sbjct: 335 HIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQP 391

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 392 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|312797304|ref|YP_004030226.1| 2-polyprenylphenol 6-hydroxylase accessory protein ubiB
           [Burkholderia rhizoxinica HKI 454]
 gi|312169079|emb|CBW76082.1| 2-polyprenylphenol 6-hydroxylase accessory protein ubiB
           [Burkholderia rhizoxinica HKI 454]
          Length = 525

 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 182/393 (46%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL P D+  +L++L  + P    A     IE++ G+ +  +
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLPVDIATELAKLQDQVPPFDSAVAIALIEKSLGKPVDVL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           FD FE  PVAS SIAQVH A  R R      KP  VA+KV  PG+   I  D  ++   A
Sbjct: 116 FDEFERVPVASASIAQVHFA--RLRSGAHAGKP--VAIKVLRPGMLPVIDSDLALLRDIA 171

Query: 344 KISSVIPAV-KWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           + +  + A  K LR  E V +F  ++  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 172 RWTERLWADGKRLRPREVVAEFDKYLHDELDLMREAANASQLRRNFAGLDLLLVPEMYWE 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                V+V     G  +S+ VD L+        LA  G       +  D F HADMHPGN
Sbjct: 232 YCTSTVIVMERMIGVPISQ-VDTLRSAGVDIPKLARQGVEIFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +      +          I LD G+   LS  D+  L + F A  +RD    A  T
Sbjct: 291 IQVSLDPDHFGR---------YIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVA--T 339

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
           L L      P+ +  +EE++ A      P  D     +   + + +L    RR  V +  
Sbjct: 340 LHLESGWVPPHTR--VEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 398 QLVLLQKTMLNVEGLGRALDPELDLWKTAKPYL 430


>gi|73670054|ref|YP_306069.1| 2-octaprenylphenol hydroxylase [Methanosarcina barkeri str. Fusaro]
 gi|72397216|gb|AAZ71489.1| 2-octaprenylphenol hydroxylase [Methanosarcina barkeri str. Fusaro]
          Length = 559

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 185/394 (46%), Gaps = 31/394 (7%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V + LE  GP +IK GQ  + R DL P +   + ++L  +AP   F   +  +    G  
Sbjct: 63  VRKMLEELGPTYIKLGQLLSMRHDLIPPEYAAEFAKLQDEAPSFEFEEVELIVREELGHS 122

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           + E+F+ FE+ P+A  SI QVHRA ++    G +     V VKV+ PG+ E I  D  I+
Sbjct: 123 IEELFECFEKKPLACASIGQVHRAKIK---DGDE-----VVVKVQRPGIKEVIESDLDIM 174

Query: 340 -NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
            ++A  I   +P  +  R  E V + +  +++++D  +E  +  RF  NFR    V  P+
Sbjct: 175 YSIARLIDEHMPEARLYRPIELVDELSRSILAEIDYTQEGWNADRFAENFRENSQVHIPR 234

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDEL--QGHERLKSALAHIGTHALLKMLLVDNFIHA 456
             +   +  VL   Y +G   SR VD L  QG +R  S +A +   A ++ +  D F HA
Sbjct: 235 VYWDYTNTRVLTLEYIKGIKSSR-VDLLDRQGFDR--SNIASVVIEAFMQQVFEDGFFHA 291

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           D+HPGNIL+                  V FLD GM   LS       ++   A+   D  
Sbjct: 292 DLHPGNILI-------------MEDGTVAFLDFGMAGHLSSEVCDIFLDGMVALVNGDSS 338

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLEKVRRHRV 574
              E    +    +  + ++  E+V E+F   ++G     L   +  +++L+  +R H+V
Sbjct: 339 LFVELLRDMGCIDSYADTRSLKEDV-ESFRSKYYGKALKKL-DASTIIEELIGILRDHQV 396

Query: 575 NVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
            +  N+  ++   + +EG+    DP  N  + L+
Sbjct: 397 TMPHNIALLVRGIVAVEGFGLITDPDLNFSELLE 430


>gi|427399484|ref|ZP_18890722.1| 2-polyprenylphenol 6-hydroxylase [Massilia timonae CCUG 45783]
 gi|425721504|gb|EKU84416.1| 2-polyprenylphenol 6-hydroxylase [Massilia timonae CCUG 45783]
          Length = 520

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 182/396 (45%), Gaps = 29/396 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P          I R+ G    
Sbjct: 56  QALEELGPIFVKFGQVLSTRRDLVPPDIADELALLQDRVPPFGSDLAVAQITRSLGAHPD 115

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           E+F  F+  PVAS SIAQVH A LR    G++     VAVKV  PG+ + I  D  ++ L
Sbjct: 116 ELFARFDREPVASASIAQVHFAQLR---DGKE-----VAVKVLRPGMKKLIDEDMALMRL 167

Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           AA  I  V    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  
Sbjct: 168 AASLIERVWGEARRLKPREVVAEFDKYLHDELDLMREAANASQLRRNFAGSSLLMVPEMY 227

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +     +V+V     G  +S+ +D L         L+  G       +  D F HADMHP
Sbjct: 228 WDYCSSSVIVMERMYGIPISQ-IDRLAAAGVDLKKLSSDGVEIFFTQVFRDGFFHADMHP 286

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNILV  A +   +          I LD G+   L+  D+  L + F A  RRD +  AE
Sbjct: 287 GNILVSTAPETLGR---------YIALDFGIVGTLNDFDKDYLSQNFLAFFRRDYKRVAE 337

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
             +    +         ++E++ A        +  P  D+    + + +L +  RR  V 
Sbjct: 338 AHI----ESGWAPQNTRVDELEAAVRACCEPIFDRPLKDISF-GQVLLRLFQTSRRFNVE 392

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 393 VQPQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPYL 428


>gi|261378022|ref|ZP_05982595.1| 2-polyprenylphenol 6-hydroxylase [Neisseria cinerea ATCC 14685]
 gi|269145897|gb|EEZ72315.1| 2-polyprenylphenol 6-hydroxylase [Neisseria cinerea ATCC 14685]
          Length = 503

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 177/394 (44%), Gaps = 29/394 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP FIK+GQ  +TRPDL P D   +L+ L  K P      ++  IE++ G+ +  +
Sbjct: 58  LESLGPIFIKFGQVLSTRPDLIPHDYAVELARLQDKVPPFDAQLSRSQIEKSLGQSIETL 117

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           +  FE  PVAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   A
Sbjct: 118 YAEFETEPVASASIAQVHKARL---HSGEQ-----VAVKVLRPNLLPVIEQDLSLMRFGA 169

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF+    +  PK  Y 
Sbjct: 170 GWVERLFSDGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSDMLIVPKVFYD 229

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VL   +  G  VS  + +L+        LA  G       +  D F HADMHPGN
Sbjct: 230 YCTSDVLTIEWMDGTPVSD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGN 288

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           ILV    +              I LD G+   L+  D+  L   F A   RD    A   
Sbjct: 289 ILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYHRVATAH 335

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +         +A +  V E    +  P   +      + +L E  RR  V +   
Sbjct: 336 IESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQPQ 392

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 393 LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|300705182|ref|YP_003746785.1| 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway
           [Ralstonia solanacearum CFBP2957]
 gi|421889418|ref|ZP_16320457.1| 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway
           [Ralstonia solanacearum K60-1]
 gi|299072846|emb|CBJ44202.1| 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway
           [Ralstonia solanacearum CFBP2957]
 gi|378965262|emb|CCF97205.1| 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway
           [Ralstonia solanacearum K60-1]
          Length = 525

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 183/395 (46%), Gaps = 25/395 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+  +L++L  + P          +ER+ G+ LS 
Sbjct: 56  ALEQLGPIFVKFGQVLSTRRDLLPPDVADELAKLQDRVPSFDPKVAAAIVERSLGKPLSA 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +F  F+  PVAS SIAQVH A+LR    G       VAVKV  PG+   I  D  ++ ++
Sbjct: 116 LFHRFDHHPVASASIAQVHFATLR----GGPDDGREVAVKVLRPGMLPVIDSDLALMRDV 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 172 ATWMEKLWADGKRLKPREVVAEFDKYLHDELDLMREAANASQLRRNFANSDLLLVPEVFW 231

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 V V     G  +S +  EL+        LA  G       +  D F HADMHPG
Sbjct: 232 DWCTSEVFVMERMHGVRIS-HAAELREAGVDMHKLARDGVEIFFTQVFRDGFFHADMHPG 290

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV VA +   +          I LD G+   LS+ D+  L + F A  +RD    A  
Sbjct: 291 NILVSVAPESFGR---------YIALDFGIVGALSEFDKNYLAQNFLAFFQRDYHRVA-- 339

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
              L  +      +  +EE++ A       ++  P G+ +     + +L +  RR  V V
Sbjct: 340 --LLHVESGWAPEETRVEELEGAIRACCEPYFDRPLGE-ISLGLVLMRLFQTSRRFNVEV 396

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 397 QPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAKPFL 431


>gi|161869492|ref|YP_001598659.1| putative ubiquinone biosynthesis protein UbiB [Neisseria
           meningitidis 053442]
 gi|161595045|gb|ABX72705.1| ubiquinone biosynthesis protein [Neisseria meningitidis 053442]
          Length = 527

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 181/395 (45%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G+ + +
Sbjct: 81  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQSIEK 140

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL- 341
           ++  FE  P+AS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 141 LYAEFETEPIASASIAQVHKARL---HSGER-----VAVKVLRPNLLPLIEQDLSLMRFG 192

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +  +    + L+  E V +F  ++  ++DL REAA+  +   NF+    +  PK  Y
Sbjct: 193 AAWVERLFSDGRRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFQNSNMLIVPKVFY 252

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  V+  + +L+        LA  G       +  D F HADMHPG
Sbjct: 253 DYCTSDVLTIEWMDGTPVAD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPG 311

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD R  A  
Sbjct: 312 NILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA 358

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A +  V E    +  P   +      + +L E  RR  V +  
Sbjct: 359 HIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQP 415

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 416 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 450


>gi|326202669|ref|ZP_08192537.1| ABC-1 domain-containing protein [Clostridium papyrosolvens DSM
           2782]
 gi|325987253|gb|EGD48081.1| ABC-1 domain-containing protein [Clostridium papyrosolvens DSM
           2782]
          Length = 562

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 177/390 (45%), Gaps = 37/390 (9%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           +LE  GP F+K GQ  +TR D+FP ++ ++L +L       SF+  K  IE  FG +L +
Sbjct: 64  SLEELGPTFVKLGQILSTRADIFPVEVVEELKKLQDSVQPFSFSEVKAVIEEDFGDQLKD 123

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           I+  F+E P+A+ SI+QVHRA +     G++     VAVKV+ PG+ ++I  D  I+ +L
Sbjct: 124 IYKEFDEKPIAAASISQVHRAKMN---SGKQ-----VAVKVQRPGIEQTIHEDLNILKDL 175

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  I               V  F   + +++D  +EA +L  F  NF + K V  P+  +
Sbjct: 176 AHFIDHHTQYGSLYDCSGMVMDFENVIQNELDFTKEAENLDIFKKNFSKDKGVKVPEVKW 235

Query: 402 PLVHPAVLVETYEQGECV-------SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFI 454
                 VL   Y +G  V       +  +D  Q   RL ++L +         +L D F 
Sbjct: 236 IYTTKRVLTMDYIKGIRVDDGKTLEANDIDTWQLANRLATSLCN--------QILRDGFF 287

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           HAD HPGNI V               +  ++FLD+GM   L+ T +  +  FF  V  RD
Sbjct: 288 HADPHPGNIQV-------------LPEGTIVFLDLGMVGSLNDTRKKMISNFFIGVTSRD 334

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRV 574
                +  + +       N K F ++V+     + T   + +   E + ++L     + +
Sbjct: 335 STMVVKSIVDMETMPKRSNMKKFEKDVNRIIEKYLTMPMNEIKVEELLSEILNIAFLNHI 394

Query: 575 NVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
            +      +  T + L+G  + L P  N +
Sbjct: 395 KIPREFVLLSKTLVTLQGLLQSLAPDLNAL 424


>gi|254482761|ref|ZP_05095999.1| 2-polyprenylphenol 6-hydroxylase [marine gamma proteobacterium
           HTCC2148]
 gi|214037120|gb|EEB77789.1| 2-polyprenylphenol 6-hydroxylase [marine gamma proteobacterium
           HTCC2148]
          Length = 547

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 182/397 (45%), Gaps = 31/397 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + LE  GP FIK+GQ  +TR DL P D+  +L++L    P    + +   IE A G+ ++
Sbjct: 57  KALEELGPVFIKFGQMLSTRRDLLPEDIADELAKLQDDVPPFPESQSVAIIEEALGKPVA 116

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
           E++  FE +P+AS S+AQVH A L   + G++     V VKV  P +   IR+D  ++  
Sbjct: 117 ELYANFEASPMASASVAQVHAARL---HSGEE-----VVVKVVRPDIEPVIRQDIALMFT 168

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           LA  ++   P  K LR  E V+ + + ++ ++DLAREAA+ S+   NF   K V  P+  
Sbjct: 169 LAKLVNRYAPDGKRLRPLEVVRDYELIILDELDLAREAANASQLRRNFEDGKLVYVPQVY 228

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +      V       G  V+  ++ L+  +     LA  G       +L D+F HADMHP
Sbjct: 229 WDYTRREVFTMERIYGIPVTD-MEVLREKKVDLKLLAERGVEIFFTQVLRDSFFHADMHP 287

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V              + P  I +D  +   LS++D+  L      + +RD R  A+
Sbjct: 288 GNIFVDAIDP---------ADPTYIAVDCAIIGALSESDQYYLARNLLGIFQRDYREVAQ 338

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP------AECMQQLLEKVRRHRV 574
             +       C    A     D   A     E     P       + +  L +  RR  +
Sbjct: 339 LHV------ECGWVPADTRVQDFESALRAVCEPVFERPISEISFGQLLIYLFKTARRFDM 392

Query: 575 NVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            V  ++  +  T L +EG  R+L P  N+ DT Q  L
Sbjct: 393 EVQPSLVLLQKTLLNIEGLGRQLYPDLNLWDTAQPFL 429


>gi|82702117|ref|YP_411683.1| putative ubiquinone biosynthesis protein UbiB [Nitrosospira
           multiformis ATCC 25196]
 gi|82410182|gb|ABB74291.1| 2-octaprenylphenol hydroxylase [Nitrosospira multiformis ATCC
           25196]
          Length = 504

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 184/392 (46%), Gaps = 29/392 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+  +L++L  + P    +   KT+E  +G+ ++E+
Sbjct: 56  LEALGPIFVKFGQMLSTRRDLLPPDIADELAKLQDQVPPFPSSIALKTLEEVYGKPVNEV 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  PVAS SIAQVH A L   + G +     VAVKV  PG+   I  D  +++  A
Sbjct: 116 FLLFDVEPVASASIAQVHLAVL---HDGTE-----VAVKVLRPGIAPVIAHDIALMDTGA 167

Query: 344 KISSVI-PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
            +  ++ P  K L++ E V +FA  +  ++DL REA++ S+   NF     +  P+  + 
Sbjct: 168 LLLEIVWPDAKRLKVREVVTEFARHLDDELDLMREASNCSQLRRNFLDSPLLLVPEVYWD 227

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
             + +V+V    +G  +S +V  L+        LA +G       +  D + HADMHPGN
Sbjct: 228 YCYSSVMVMQRVKGTPIS-HVTALREQGVDIPRLARVGVEIFFTQVFRDGYFHADMHPGN 286

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V                   I +D G+   L+  D+  L + F A  RRD +  AE  
Sbjct: 287 IFV-------------GKDGRYIAVDFGIMGTLTDEDKNYLAQNFLAFFRRDYKRVAEAH 333

Query: 523 LRLS---KQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +      K     + +  I  V E    +  P  ++      + +L +  R+  V +   
Sbjct: 334 VEAGWAPKNTRVNDFETAIRAVCE--PIFDKPLSEISF-GRVLLRLFQTSRQFNVEIQPQ 390

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 391 LVMLQKTLLNIEGLGRDLDPNLDLWTTAKPYL 422


>gi|340785838|ref|YP_004751303.1| Ubiquinone biosynthesis monooxygenase [Collimonas fungivorans
           Ter331]
 gi|340551105|gb|AEK60480.1| Ubiquinone biosynthesis monooxygenase [Collimonas fungivorans
           Ter331]
          Length = 525

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 186/390 (47%), Gaps = 29/390 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P  S       IE++      +
Sbjct: 57  ALEELGPIFVKFGQVLSTRRDLLPGDMVDELARLQDRVPPFSSDLAIAQIEKSLKAHPDQ 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  FE  PVAS SIAQVH A+L+    G++     VAVKV  PG+ +SI  D  ++++A
Sbjct: 117 LFASFERVPVASASIAQVHFATLK---NGKE-----VAVKVLRPGMKKSIDEDVALMHIA 168

Query: 343 AKISSVIPAV-KWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A +   + A  + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 169 AGLVEKLWADGRRLKAREVVGEFDKYLHDELDLMREAANGSQLRRNFANSDLLVVPEMYW 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                +V+V     G  +S+ +D L+        L+  G       +  D F HADMHPG
Sbjct: 229 DYCSSSVIVMERMHGIPISQ-LDRLRDAGVDLGKLSRDGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV VA     +          I LD G+   L+  D+  L + F A  +RD +  AE 
Sbjct: 288 NILVSVAPATFGR---------YIALDFGIVGTLNDFDKDYLSQNFLAFFQRDYKRVAEA 338

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
            +    +      +  ++E++ A        +  P  D+    + + +L +  RR  V V
Sbjct: 339 HI----ESGWAPKETRVDELESAVRACCEPIFDRPLKDISF-GQVLLRLFQTSRRFNVEV 393

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
              +  +  T L +EG  R+LDP  ++  T
Sbjct: 394 QPQLVLLQKTLLNVEGLGRQLDPDLDLWKT 423


>gi|197287343|ref|YP_002153215.1| ubiquinone biosynthesis protein UbiB [Proteus mirabilis HI4320]
 gi|227356972|ref|ZP_03841344.1| ubiquinone biosynthesis protein [Proteus mirabilis ATCC 29906]
 gi|425070081|ref|ZP_18473195.1| 2-polyprenylphenol 6-hydroxylase [Proteus mirabilis WGLW6]
 gi|194684830|emb|CAR46928.1| probable ubiquinone biosynthesis protein [Proteus mirabilis HI4320]
 gi|227162850|gb|EEI47809.1| ubiquinone biosynthesis protein [Proteus mirabilis ATCC 29906]
 gi|404595874|gb|EKA96407.1| 2-polyprenylphenol 6-hydroxylase [Proteus mirabilis WGLW6]
          Length = 545

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 180/399 (45%), Gaps = 25/399 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+T GP +IK GQ  +TR DLFP  +  +L+ L  K         ++ IE++FG  + + 
Sbjct: 61  LQTLGPVWIKLGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKKARQYIEKSFGGPIDKW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           FD F+E P+AS SIAQVH A+L+     +  K +V  +KV  P +   I+ D  ++   A
Sbjct: 121 FDDFDETPLASASIAQVHTATLK-----ENGKEVV--LKVIRPDIQPVIKADIRLMYRLA 173

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            +   +P  + LR  E ++++   ++ +++L REAA+  +   NF     +  P+     
Sbjct: 174 NLLPFLPDGRRLRPKEVIREYEKTLLDELNLLREAANAIQLRRNFENSSMLYIPEVYSDY 233

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
            H  V+V     G  VS  +D L         LA  G       +  D+F HADMHPGN+
Sbjct: 234 CHENVMVMERIYGIPVSD-IDALNAQNTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNV 292

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
            +     ++         P+ I +D G+   L+K D+  L E F A   RD R  AE  +
Sbjct: 293 FISYDHPEN---------PYYIGIDCGIVGSLNKEDKRYLAENFLAFFNRDYRRVAELHV 343

Query: 524 R---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
               +    N  + +  I  V E        E    H    +  L    RR  + V   +
Sbjct: 344 DSGWVPADTNVEDFEFAIRTVCEPIFEKPLSEISFGH---VLLNLFNTARRFNMEVQPQL 400

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
             +  T L +EG  R+L P  ++  T +  L   DW  S
Sbjct: 401 VLLQKTLLYVEGLGRQLYPQLDLWKTAKPFL--EDWLHS 437


>gi|293573033|ref|ZP_06683975.1| protein kinase, ABC1 family [Enterococcus faecium E980]
 gi|291606935|gb|EFF36315.1| protein kinase, ABC1 family [Enterococcus faecium E980]
          Length = 582

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 180/419 (42%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  K+TIE      
Sbjct: 36  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKRTIETELSLS 95

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +S+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 96  VSDIFDDFSKSPFASASMGQAHRAKLK---SGD-----AVVVKIQHPNIAEEIRLDLQLF 147

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 148 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 207

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++   G E         +LK  +A +     +K +  
Sbjct: 208 YDAFCSKKVIVMEEMSGKNLNHLMNAENGTETFITGIQNKQLKQEVAKLLVENFMKQVFD 267

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKR---------------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V  K+   +                 FR+         P+ + +
Sbjct: 268 DGFFHADPHPGNLLFHVLTKEEQTRARRTAETVHEKEFGPFAFRASTSTEDPVAPYTVNY 327

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 328 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGLFDESRFHQELTSFLE 387

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E   Q++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 388 QYYDSPIDEINLQEVFAQVVMICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 446


>gi|451936958|gb|AGF87267.1| putative ubiquinone biosynthesis protein [uncultured organism]
          Length = 508

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 183/396 (46%), Gaps = 33/396 (8%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE+ GP F+K+GQ  +TR DL P D+  +L+ L  + P       +  +E  +G+ L 
Sbjct: 54  RALESLGPIFVKFGQMLSTRRDLIPPDIADELALLQDRVPPFPSEQARALLEAHYGKPLE 113

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
            +F  FE  PVAS S+AQVH A L   + G +     VAVK+  PG+   I  D  +++ 
Sbjct: 114 SVFARFERDPVASASVAQVHFAEL---FDGTQ-----VAVKILRPGIAPVIEHDLALMDT 165

Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           AA+ + ++ P  + L+  E V +FA  +  ++DL REAA+ S+   NF     +  P+  
Sbjct: 166 AARLLEALWPESRRLKPREVVAEFAKSLHDELDLIREAANCSQLRRNFAGSDMLLVPEVY 225

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +      V+V     G  +S+ ++ L+        L+ +G       +  D F HADMHP
Sbjct: 226 WDYCGREVMVMQRMVGTPISQ-IETLRAKGIDLKRLSAMGVEIFFTQVFRDGFFHADMHP 284

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNILV                   I LD G+   L+  D+  L + F A  +RD R  A 
Sbjct: 285 GNILV-------------ADDGRYIALDFGIVGTLADEDKNYLAQNFLAFFKRDYRRVAI 331

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
             L    +     P   ++E + A        +  P  D+    + + +L +  RR  + 
Sbjct: 332 AHL----EAGWVPPHVRVDEFEGAIRTVCEPIFDRPLKDISF-GKTLLRLFQTARRFEME 386

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 387 VQPQLVLLQKTLLNIEGLGRQLDPELDLWQTAKPFL 422


>gi|430842367|ref|ZP_19460282.1| ubiquinone biosynthesis protein [Enterococcus faecium E1007]
 gi|430493448|gb|ELA69751.1| ubiquinone biosynthesis protein [Enterococcus faecium E1007]
          Length = 581

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 180/419 (42%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  K+TIE      
Sbjct: 35  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKRTIETELSLS 94

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +S+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 95  VSDIFDDFSKSPFASASMGQAHRAKLK---SGD-----AVVVKIQHPNIAEEIRLDLQLF 146

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 147 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 206

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++   G E         +LK  +A +     +K +  
Sbjct: 207 YDAFCSKKVIVMEEMSGKNLNHLMNAENGTETFITGIQNKQLKQEVAKLLVENFMKQVFD 266

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKR---------------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V  K+   +                 FR+         P+ + +
Sbjct: 267 DGFFHADPHPGNLLFHVLTKEEQTRARRTAETVHEKEFGPFAFRASTSTEDPVAPYTVNY 326

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 327 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGLFDESRFHQELTSFLE 386

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E   Q++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 387 QYYDSPIDEINLQEVFAQVVMICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 445


>gi|319639335|ref|ZP_07994086.1| ubiquinone biosynthesis protein ubiB [Neisseria mucosa C102]
 gi|317399519|gb|EFV80189.1| ubiquinone biosynthesis protein ubiB [Neisseria mucosa C102]
          Length = 503

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 177/394 (44%), Gaps = 29/394 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP FIK+GQ  +TRPDL P D   +L+ L  K P      ++  IE++ G+ +  +
Sbjct: 58  LESLGPIFIKFGQVLSTRPDLIPHDYAVELARLQDKVPPFDAQLSRSQIEKSLGQSIDTL 117

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           +  FE  PVAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   A
Sbjct: 118 YAEFETEPVASASIAQVHKARL---HSGEQ-----VAVKVLRPNLLPVIEQDLSLMRFGA 169

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF+    +  PK  Y 
Sbjct: 170 GWVERLFSDGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSNMLIVPKVFYD 229

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VL   +  G  VS  + +L+        LA  G       +  D F HADMHPGN
Sbjct: 230 YCTSDVLTIEWMDGTPVSD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGN 288

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           ILV    +              I LD G+   L+  D+  L   F A   RD    A   
Sbjct: 289 ILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYHRVATAH 335

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +         +A +  V E    +  P   +      + +L E  RR  V +   
Sbjct: 336 IESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQPQ 392

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 393 LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|254448951|ref|ZP_05062406.1| 2-polyprenylphenol 6-hydroxylase [gamma proteobacterium HTCC5015]
 gi|198261488|gb|EDY85778.1| 2-polyprenylphenol 6-hydroxylase [gamma proteobacterium HTCC5015]
          Length = 549

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 186/408 (45%), Gaps = 35/408 (8%)

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGF 287
           GP F+K+GQ  +TR D+ P ++  +L++L  + P  S       IE+AFGR  S +F  F
Sbjct: 65  GPIFVKFGQVLSTRRDILPDEVADQLAQLQDRVPPFSSERAHSEIEQAFGRPASALFARF 124

Query: 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII----NLAA 343
           E+ P+AS SIAQVH A L+    G++     V VKV  P V   IR D  ++     LA 
Sbjct: 125 EDRPLASASIAQVHAAELK---DGRQ-----VVVKVLRPEVERRIRTDVAVMYRFARLAE 176

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
           + SS     + LR+   V+++   ++ ++DL REAA+ S+   NF     +  P+  + L
Sbjct: 177 RFSS---EARRLRMLAVVEEYEKTILDELDLVREAANGSQLRRNFEGSDILYIPQMEWSL 233

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
               V+V     G  V+  +  L         LA  G       +  DNF HADMHPGNI
Sbjct: 234 TSERVIVMERIDGIPVTD-LKRLAAEGVDMKMLAERGVEIFFSQVFRDNFFHADMHPGNI 292

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
            VR  +  S         P  + +D G+   LS  D+  L E F A  RRD    AE   
Sbjct: 293 FVRPGRPDS---------PQYMAVDFGIIGSLSPADKRYLAENFLAFFRRDYLRVAE--- 340

Query: 524 RLSKQQNCPNPKAFIEEVDEAFAFWGTP--EGDL--VHPAECMQQLLEKVRRHRVNVDGN 579
            L  +    +P   ++E + A      P  E  L  +     + +L +  RR+   V   
Sbjct: 341 -LHVESGWMSPDTRVDEFESAVRSACEPIFEKPLAEISFGNLLLRLFKIARRYGYEVQPQ 399

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYTIDGL 627
           +  +  T L +EG  R+L P  ++  T Q  L +  W      T D L
Sbjct: 400 LVLLQKTLLNIEGLGRQLYPQLDLWSTAQPFLER--WMNEQVGTTDLL 445


>gi|431081591|ref|ZP_19495681.1| ubiquinone biosynthesis protein [Enterococcus faecium E1604]
 gi|431118217|ref|ZP_19498171.1| ubiquinone biosynthesis protein [Enterococcus faecium E1613]
 gi|431592217|ref|ZP_19521453.1| ubiquinone biosynthesis protein [Enterococcus faecium E1861]
 gi|431738952|ref|ZP_19527892.1| ubiquinone biosynthesis protein [Enterococcus faecium E1972]
 gi|430565523|gb|ELB04669.1| ubiquinone biosynthesis protein [Enterococcus faecium E1604]
 gi|430568174|gb|ELB07231.1| ubiquinone biosynthesis protein [Enterococcus faecium E1613]
 gi|430591842|gb|ELB29869.1| ubiquinone biosynthesis protein [Enterococcus faecium E1861]
 gi|430596495|gb|ELB34319.1| ubiquinone biosynthesis protein [Enterococcus faecium E1972]
          Length = 581

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 180/419 (42%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  K+TIE      
Sbjct: 35  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKRTIETELSLS 94

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +S+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 95  VSDIFDDFSKSPFASASMGQAHRAKLK---SGD-----AVVVKIQHPNIAEEIRLDLQLF 146

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 147 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 206

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++   G E         +LK  +A +     +K +  
Sbjct: 207 YDAFCSKKVIVMEEMSGKNLNHLMNAENGTETFITGIQNKQLKQEVAKLLVENFMKQVFD 266

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKR---------------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V  K+   +                 FR+         P+ + +
Sbjct: 267 DGFFHADPHPGNLLFHVLTKEEQTRARRTAETVHEKEFGPFAFRASTSTEDPVAPYTVNY 326

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 327 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGLFDESRFHQELTSFLE 386

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E   Q++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 387 QYYDSPIDEINLQEVFAQVVMICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 445


>gi|254282220|ref|ZP_04957188.1| 2-polyprenylphenol 6-hydroxylase [gamma proteobacterium NOR51-B]
 gi|219678423|gb|EED34772.1| 2-polyprenylphenol 6-hydroxylase [gamma proteobacterium NOR51-B]
          Length = 521

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 178/396 (44%), Gaps = 29/396 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE  GP FIK+GQ  +TR DL P D+ ++L+ L    P  +    ++ IE A G  + 
Sbjct: 53  RALEDLGPVFIKFGQLLSTRRDLLPDDIARELALLQDTVPPFASDTAQELIESALGSPID 112

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
            +F  F+  P+A+ S+AQVH A L     G +     V VKV  P +   I  D  +I +
Sbjct: 113 SLFARFDREPLAAASVAQVHSAQL---PTGDE-----VVVKVLRPDILPVINADLKLIKI 164

Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           AA+ ++ ++P  + LR  E    +   ++ ++DL REAA+ S+   NF     +  P  +
Sbjct: 165 AARWVAWLMPEGRRLRAREVAADYERTLLDELDLRREAANASQLRRNFLDSDLIMVPAVI 224

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +PL    V+V     G  V+  VD L+        LA  G       +L D+F HADMHP
Sbjct: 225 WPLTRQTVMVSERIYGVPVTD-VDTLRERGVNMRVLAERGVEIFFTQVLRDSFFHADMHP 283

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V  +  +         +P  I +D  +  +L + D   L     A+  +D R  A 
Sbjct: 284 GNIFVDTSNPE---------RPKYIAIDCAIVGQLEQDDLYYLARNLLAIFEQDYRLVA- 333

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
              RL  +     P   I E + A        +  P GD+      +  L     R  + 
Sbjct: 334 ---RLHVECGWVPPDTPIAEFESAMRALCEPVFERPLGDISF-GGMLVSLFRTAGRFDMQ 389

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V   +  +  T L +EG  R+L P  N+ DT +  L
Sbjct: 390 VQPQLVLLQKTLLNIEGLGRQLYPELNLWDTAKPFL 425


>gi|385854708|ref|YP_005901221.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis
           M01-240355]
 gi|421554351|ref|ZP_16000295.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 98008]
 gi|325203649|gb|ADY99102.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis
           M01-240355]
 gi|402333030|gb|EJU68346.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 98008]
          Length = 503

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 180/395 (45%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G+ + +
Sbjct: 57  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQPIEK 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           ++  FE  PVAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 117 LYAEFETEPVASASIAQVHKARL---HSGER-----VAVKVLRPNLLPVIEQDLSLMRFG 168

Query: 343 AK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +  +    K L+  E V +F  ++  ++DL REAA+  +   NF+    +  PK  Y
Sbjct: 169 AGWVERLFADGKRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFQNSNMLIVPKVFY 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  V+  + +L+        LA  G       +  D F HADMHPG
Sbjct: 229 DYCTSDVLTIEWMDGTPVAD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD R  A  
Sbjct: 288 NILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA 334

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A +  V E    +  P   +      + +L E  RR  V +  
Sbjct: 335 HIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQP 391

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 392 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|421862867|ref|ZP_16294570.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|309379594|emb|CBX21765.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 503

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 180/396 (45%), Gaps = 31/396 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      ++  IE++ G+ + +
Sbjct: 57  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSRSQIEKSLGQPIEK 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL- 341
           ++  FE  PVAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 117 LYAEFETDPVASASIAQVHKARL---HSGER-----VAVKVLRPNLLPLIEQDLSLMRFG 168

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +  +    + L+  E V +F  ++  ++DL REAA+  +   NF+    +  PK  Y
Sbjct: 169 AAWVERLFSDGRRLKPREVVAEFDKYLHDELDLMREAANAGQLGRNFQNSNMLIVPKVFY 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  VS  + +L+        LA  G       +  D F HADMHPG
Sbjct: 229 DYCTSDVLTIEWMDGTPVSD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD R  A  
Sbjct: 288 NILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA 334

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGD----LVHPAECMQQLLEKVRRHRVNVD 577
            +    +          EE++ A      P  +     +     + +L E  RR  V + 
Sbjct: 335 HI----ESGWVPADTCAEELEAAVRAVCEPVFNKTISQISFGLVLMRLFEVSRRFNVEIQ 390

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 391 PQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|425073926|ref|ZP_18477031.1| 2-polyprenylphenol 6-hydroxylase [Proteus mirabilis WGLW4]
 gi|404594579|gb|EKA95148.1| 2-polyprenylphenol 6-hydroxylase [Proteus mirabilis WGLW4]
          Length = 545

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 180/399 (45%), Gaps = 25/399 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+T GP +IK GQ  +TR DLFP  +  +L+ L  K         ++ IE++FG  + + 
Sbjct: 61  LQTLGPVWIKLGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKKARQYIEKSFGGPIDKW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           FD F+E P+AS SIAQVH A+L+     +  K +V  +KV  P +   I+ D  ++   A
Sbjct: 121 FDDFDETPLASASIAQVHTATLK-----ENGKEVV--LKVIRPDIQPVIKADIRLMYRLA 173

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            +   +P  + LR  E ++++   ++ +++L REAA+  +   NF     +  P+     
Sbjct: 174 NLLPFLPDGRRLRPKEVIREYEKTLLDELNLLREAANAIQLRRNFENSSMLYIPEVYSDY 233

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
            H  V+V     G  VS  +D L         LA  G       +  D+F HADMHPGN+
Sbjct: 234 CHENVMVMERIYGIPVSD-IDALNAQNTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNV 292

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
            +     ++         P+ I +D G+   L+K D+  L E F A   RD R  AE  +
Sbjct: 293 FISYDHPEN---------PYYIGIDCGIVGSLNKEDKRYLAENFLAFFNRDYRRVAELHV 343

Query: 524 R---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
               +    N  + +  I  V E        E    H    +  L    RR  + V   +
Sbjct: 344 DSGWVPADTNVEDFEFAIRTVCEPIFEKPLSEISFGH---VLLNLFNTARRFNMEVQPQL 400

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
             +  T L +EG  R+L P  ++  T +  L   DW  S
Sbjct: 401 VLLQKTLLYVEGLGRQLYPQLDLWKTAKPFL--EDWLHS 437


>gi|421537566|ref|ZP_15983751.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 93003]
 gi|402318670|gb|EJU54187.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 93003]
          Length = 503

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 181/395 (45%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G+ + +
Sbjct: 57  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQPIEK 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL- 341
           ++  FE  PVAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 117 LYAEFETEPVASASIAQVHKARL---HSGER-----VAVKVLRPNLLPLIEQDLSLMRFG 168

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +  +    + L+  E V +F  ++  ++DL REAA+  +   NF+    +  PK  Y
Sbjct: 169 AAWVERLFSDGRRLKPREVVAEFDKYLHDELDLMREAANAGQLGRNFQNSNMLIVPKVFY 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  V+  + +L+        LA  G       +  D F HADMHPG
Sbjct: 229 DYCTSDVLTIEWMDGTPVAD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD R  A  
Sbjct: 288 NILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA 334

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A +  V E    +  P   +      + +L E  RR  V +  
Sbjct: 335 HIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQP 391

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 392 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|255066573|ref|ZP_05318428.1| 2-polyprenylphenol 6-hydroxylase [Neisseria sicca ATCC 29256]
 gi|255049157|gb|EET44621.1| 2-polyprenylphenol 6-hydroxylase [Neisseria sicca ATCC 29256]
          Length = 503

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 179/394 (45%), Gaps = 29/394 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP FIK+GQ  +TRPDL P D   +L++L  + P      ++  IE++ G+ +  +
Sbjct: 58  LESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDQVPPFDAQLSRSQIEKSLGQSIETL 117

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL-A 342
           +  FE  PVAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   A
Sbjct: 118 YAEFETEPVASASIAQVHKARL---HSGEQ-----VAVKVLRPNLLPVIEQDLSLMRFGA 169

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           A +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF+    +  PK  Y 
Sbjct: 170 AWVERLFADGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSDMLIVPKVFYD 229

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VL   +  G  VS  + +L+        LA  G       +  D F HADMHPGN
Sbjct: 230 YCSSDVLTIEWMDGTPVSE-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGN 288

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           ILV    +              I LD G+   L+  D+  L   F A   RD    A   
Sbjct: 289 ILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYHRVATAH 335

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +         +A +  V E    +  P   +      + +L E  RR  V +   
Sbjct: 336 IESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQPQ 392

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 393 LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|224826238|ref|ZP_03699340.1| 2-polyprenylphenol 6-hydroxylase [Pseudogulbenkiania ferrooxidans
           2002]
 gi|224601339|gb|EEG07520.1| 2-polyprenylphenol 6-hydroxylase [Pseudogulbenkiania ferrooxidans
           2002]
          Length = 508

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 179/398 (44%), Gaps = 24/398 (6%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V   LE+ GP F+K+GQ  +TR DL P D   +L+ L  K P    A  ++ IE++FGR 
Sbjct: 52  VREALESLGPIFVKFGQVLSTRRDLLPPDYADELARLQDKVPPFDGALARQVIEQSFGRT 111

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +  ++  F E PVAS S+AQVH+A L+    G K +   VAVKV  PG+   I +D  ++
Sbjct: 112 VDSLYADFNEVPVASASVAQVHKAWLKLP-DGSKGRE--VAVKVLRPGIQLVIEQDLALM 168

Query: 340 -NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA  +       K L+  E V +F  ++  ++D+  EAA+ S+   NF     +  P+
Sbjct: 169 RTLAGWVERFFVDGKRLKPREVVGEFDKYLHDELDMMHEAANASQLRRNFTGSDQLIVPE 228

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             Y      VL   +  G  +S+ ++ L+        L+  G       +    F HADM
Sbjct: 229 VFYDYTTREVLTLEWMHGTPISQ-IERLREQGIDLKKLSRFGVEIFFTQVFRHGFFHADM 287

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI V    +              I LD G+   L+  D+  L   F A   RD    
Sbjct: 288 HPGNIFVAPDGR-------------YIALDFGIVGSLTDVDKHYLAVNFLAFFNRDYHRV 334

Query: 519 AECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
           A   +    + K       +A +  V E    +  P  ++      + +L E  RR  V 
Sbjct: 335 ATAHIESGWVPKDTRAEELEAAVRTVCE--PIFEKPLSEISF-GLVLLRLFETSRRFNVE 391

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +   +  +  T L +EG  R+LDP  ++ DT +  L K
Sbjct: 392 IQPQLVLLQKTLLNIEGLGRQLDPYLDLWDTAKPFLTK 429


>gi|121634354|ref|YP_974599.1| ubiquinone biosynthesis protein UbiB [Neisseria meningitidis FAM18]
 gi|385337523|ref|YP_005891396.1| putative ubiquinone biosynthesis protein UbiB [Neisseria
           meningitidis WUE 2594]
 gi|385342446|ref|YP_005896317.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis
           M01-240149]
 gi|385856713|ref|YP_005903225.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NZ-05/33]
 gi|416178982|ref|ZP_11610892.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis M6190]
 gi|416188593|ref|ZP_11614907.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis M0579]
 gi|416192959|ref|ZP_11616980.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis ES14902]
 gi|433475042|ref|ZP_20432384.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 88050]
 gi|433492053|ref|ZP_20449149.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM586]
 gi|433494130|ref|ZP_20451202.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM762]
 gi|433496312|ref|ZP_20453355.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis M7089]
 gi|433499374|ref|ZP_20456381.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis M7124]
 gi|433500342|ref|ZP_20457329.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM174]
 gi|433502460|ref|ZP_20459427.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM126]
 gi|433518192|ref|ZP_20474933.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 96023]
 gi|433523569|ref|ZP_20480236.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 97020]
 gi|120866060|emb|CAM09798.1| putative ubiquinone biosynthesis protein [Neisseria meningitidis
           FAM18]
 gi|254673417|emb|CBA08751.1| probable ubiquinone biosynthesis protein [Neisseria meningitidis
           alpha275]
 gi|319409937|emb|CBY90264.1| putative ubiquinone biosynthesis protein UbiB [Neisseria
           meningitidis WUE 2594]
 gi|325131768|gb|EGC54469.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis M6190]
 gi|325135851|gb|EGC58463.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis M0579]
 gi|325137658|gb|EGC60235.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis ES14902]
 gi|325202652|gb|ADY98106.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis
           M01-240149]
 gi|325207602|gb|ADZ03054.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NZ-05/33]
 gi|432211439|gb|ELK67391.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 88050]
 gi|432229554|gb|ELK85240.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM586]
 gi|432231430|gb|ELK87094.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM762]
 gi|432233801|gb|ELK89427.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis M7124]
 gi|432235634|gb|ELK91244.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis M7089]
 gi|432236670|gb|ELK92275.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM174]
 gi|432241924|gb|ELK97449.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM126]
 gi|432252322|gb|ELL07679.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 96023]
 gi|432261336|gb|ELL16589.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 97020]
          Length = 503

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 180/395 (45%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G+ + +
Sbjct: 57  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQSIEK 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           ++  FE  PVAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 117 LYAEFETEPVASASIAQVHKARL---HSGER-----VAVKVLRPNLLPLIEQDLSLMRFG 168

Query: 343 AK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +  +    K L+  E V +F  ++  ++DL REAA+  +   NF+    +  PK  Y
Sbjct: 169 AVWVERLFADGKRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFQNSNMLIVPKVFY 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  V+  + +L+        LA  G       +  D F HADMHPG
Sbjct: 229 DYCTSDVLTIEWMDGTPVAD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD R  A  
Sbjct: 288 NILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA 334

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A +  V E    +  P   +      + +L E  RR  V +  
Sbjct: 335 HIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQP 391

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 392 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|21231173|ref|NP_637090.1| ubiquinone biosynthesis protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768819|ref|YP_243581.1| ubiquinone biosynthesis protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188991934|ref|YP_001903944.1| hypothetical protein xccb100_2539 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|384427609|ref|YP_005636968.1| 2-polyprenylphenol 6-hydroxylase [Xanthomonas campestris pv.
           raphani 756C]
 gi|21112813|gb|AAM41014.1| ubiquinone biosynthesis protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66574151|gb|AAY49561.1| ubiquinone biosynthesis protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167733694|emb|CAP51899.1| Putative membrane protein [Xanthomonas campestris pv. campestris]
 gi|341936711|gb|AEL06850.1| 2-polyprenylphenol 6-hydroxylase [Xanthomonas campestris pv.
           raphani 756C]
          Length = 558

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 181/396 (45%), Gaps = 45/396 (11%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP F+K GQ  ATR DL P D  ++LSEL +  P   FA+ +  +  A G  
Sbjct: 63  VRRALEELGPTFVKLGQVLATRVDLLPPDWIEELSELQNAVPALPFAHIRPQLVAALGME 122

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VI 338
             ++F   +E P+A+ S+AQ HRA L             V +K+R PG+G++I  D  ++
Sbjct: 123 PEQVFARLDEEPLAAASLAQTHRAWL--------ADGTAVVLKIRRPGIGDTIDADLRLL 174

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA  + +  P +K  R  E VQQF + +  ++D A E  +  R   NF      + P+
Sbjct: 175 ARLAEIVETRAPDLKRYRPAEVVQQFTLSLRRELDFAAECRNAERIAANF-----ANDPQ 229

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERL--------KSALAHIGTHALLKMLLV 450
            + P VH     E+      V  +VD + G + +        + ALA  G   +LKM+L 
Sbjct: 230 ILIPAVHWEWTCESLN----VQDFVDGIPGRDLVAVDAAGLDRKALARTGAGIVLKMVLQ 285

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV 510
           D   HAD HPGNI              +     +  +D GM   +S+  R  + +    +
Sbjct: 286 DGCFHADPHPGNI-------------FYLRDGRIAVIDFGMVGRISEQRRFQVAQLLHGM 332

Query: 511 ARRDGRTAAECTLRLSKQQ-NCPNPKAFIEEVDEAF--AFWGTPEGDLVHPAECMQQLLE 567
              D  +  +  L  +    +   P+  +++   AF  A+ G P  +L      +  +  
Sbjct: 333 VSYDAESVIDVLLEWAGTSLDIDEPR--LQQDIGAFVDAYRGVPLKEL-RIGAMLGDVTA 389

Query: 568 KVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
            +R H + +  ++  ++   L LEG  R+LDP +++
Sbjct: 390 ILRDHGLTLPSDLALMIKAFLTLEGMGRQLDPDFDM 425


>gi|292492400|ref|YP_003527839.1| 2-polyprenylphenol 6-hydroxylase [Nitrosococcus halophilus Nc4]
 gi|291580995|gb|ADE15452.1| 2-polyprenylphenol 6-hydroxylase [Nitrosococcus halophilus Nc4]
          Length = 558

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 124/397 (31%), Positives = 178/397 (44%), Gaps = 33/397 (8%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           TLE  GP F+K+GQ  +TR DL P D+ ++L+ L            K+ IE A+G+R+SE
Sbjct: 63  TLEDLGPIFVKFGQLLSTRRDLLPDDIAEELTLLQDHVAPFPSEEAKEIIETAYGQRISE 122

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD----FVI 338
            F  FEE P+AS SIAQV+ A L   + G K     V VKV  PG+   I+ D    +++
Sbjct: 123 AFAIFEEEPLASASIAQVYTAQL---HDGSK-----VVVKVVRPGIKRVIQGDVDLLYML 174

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA +  S  P    LR  E V +    +  ++D+ RE A  S+   NF     +  P 
Sbjct: 175 AGLAERYWSEGPR---LRPREIVAELEKNLYDELDMLREGASASQLRRNFIGSTKLYVPL 231

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +      VLV    QG  +   ++EL+  E     LA IG       +   NF HADM
Sbjct: 232 VYWHYTRLNVLVMEQVQGIPIGN-INELRRQEINFKRLAEIGVEIFFTQVFRHNFFHADM 290

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNILV     ++         P+ I LD G+   L   D+  L E F A    D R  
Sbjct: 291 HPGNILVSAEDPQN---------PYYIALDFGIMGTLGPEDQRYLAENFLAFFNHDYRRV 341

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRV 574
           AE    L        P   ++E + A      P  D     +   + + +L +  RR  +
Sbjct: 342 AE----LHVDAGWVPPGTRVDEFESAIRSVCEPIFDRPLKEISFGQLLTRLFQTARRFHM 397

Query: 575 NVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            V   +  +  T L +EG  R L P  ++  T + +L
Sbjct: 398 EVQPQLVLLQKTLLNIEGLGRDLYPDLDLWQTAKPIL 434


>gi|270158257|ref|ZP_06186914.1| 2-polyprenylphenol 6-hydroxylase [Legionella longbeachae D-4968]
 gi|289163486|ref|YP_003453624.1| ubiquinone biosynthesis protein [Legionella longbeachae NSW150]
 gi|269990282|gb|EEZ96536.1| 2-polyprenylphenol 6-hydroxylase [Legionella longbeachae D-4968]
 gi|288856659|emb|CBJ10470.1| putative P.aeruginosa probable ubiquinone biosynthesis protein ubiB
           [Legionella longbeachae NSW150]
          Length = 550

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 183/401 (45%), Gaps = 27/401 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           +LE  GP FIK+GQ  +TRPD+ P D+  +LS+L  K P          IE+A+G    E
Sbjct: 61  SLEALGPIFIKFGQALSTRPDILPIDIAIELSKLQDKVPPFPSDKAMAIIEKAYGLSPYE 120

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  P +   I  D  I++  
Sbjct: 121 VFAEFDPVPLASASMAQVHAAKLK---TGEE-----VIVKVLRPNMRRVIENDLSIMHTI 172

Query: 343 AKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AK +    P ++ L+  E V +F   ++ ++DL REAA+ ++   NF     +  P+  +
Sbjct: 173 AKWADRYWPEIRRLKPKEIVAEFEHTLLDELDLQREAANSAQLRRNFEGSPILYIPEVYW 232

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 V+V     G  VS  +  LQ H      LA  G       +  D F HADMHPG
Sbjct: 233 DYSRSNVMVLERIHGIPVSD-ISSLQAHGIDIKKLAERGVEIFFTQVFRDCFFHADMHPG 291

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V     K          P  I +D G+   L+  D+  L E   A   RD R  A+ 
Sbjct: 292 NIFVSYKNPKD---------PQYICIDFGIMGTLNDNDKRYLAENLLAFFNRDYRRVAQL 342

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +++       ++ I  V E    +  P  D+   A+ + +L +  RR  + V  
Sbjct: 343 HVESGWVARDTRVDEFESGIRTVCE--PIFERPLKDISF-AQVVLRLFQVARRFHMEVQP 399

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
            +  +  T L +EG  R+L P  ++  T +  L K  W K 
Sbjct: 400 QLVLLQKTLLAIEGLGRQLYPELDLWTTAKPFLEK--WVKE 438


>gi|425053415|ref|ZP_18456960.1| ABC1 family protein [Enterococcus faecium 506]
 gi|403030421|gb|EJY42105.1| ABC1 family protein [Enterococcus faecium 506]
          Length = 572

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 180/419 (42%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 36  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 95

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+            V VK++HP + E IR D  + 
Sbjct: 96  LSDIFDDFSKSPFASASMGQAHRAKLK--------NGDAVVVKIQHPNIAEEIRLDLQLF 147

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 148 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 207

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++     E         +LK  +A +     +K +  
Sbjct: 208 YDAFCSKKVIVMEEMSGKNLNHLMNAENKTETFITGIQNKQLKQEVAKLLVENFMKQVFD 267

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V     Q ++S+K             FR+         P+ I +
Sbjct: 268 DGFFHADPHPGNLLFHVLTKEEQTQASRKTETVHEKEFGSFAFRASTSAEDPVAPYTINY 327

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 328 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 387

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 388 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 446


>gi|330818293|ref|YP_004361998.1| protein kinase [Burkholderia gladioli BSR3]
 gi|327370686|gb|AEA62042.1| Predicted unusual protein kinase [Burkholderia gladioli BSR3]
          Length = 525

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 185/396 (46%), Gaps = 25/396 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE+ GP F+K+GQ  +TR D+ P D   +L++L  + P    A     +E++ G  +S
Sbjct: 54  RALESLGPIFVKFGQMLSTRRDVLPPDFAIELTKLQDQVPPFDSALAMSLVEKSLGAPIS 113

Query: 282 EIFDGFEEAPVASGSIAQVHRASLR-FRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII- 339
            +FD F+  PVAS SIAQVH A L+   + G++     VAVKV  P +   I  D  ++ 
Sbjct: 114 ALFDEFDPVPVASASIAQVHFAKLKEGAHAGKE-----VAVKVLRPNMLPVIDSDMALLR 168

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
           ++A     + P  + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+ 
Sbjct: 169 DIATWAERLWPDSRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEM 228

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
            +     +VLV    +G  +S+ VD L+        LA  G       +  D F HADMH
Sbjct: 229 FWDYSSSSVLVMERMKGVPISQ-VDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMH 287

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGN+ V +      +          I LD G+   LS  D+  L + F A  +RD    A
Sbjct: 288 PGNVFVSLDPNHFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA 338

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVN 575
             TL L      P+ +  +EE++ A      P  D     +   + + +L    RR  V 
Sbjct: 339 --TLHLESGWVPPHTR--VEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVE 394

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +   +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 395 IQPQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|207742310|ref|YP_002258702.1| ubiquinone biosynthesis protein ubib [Ralstonia solanacearum
           IPO1609]
 gi|421899940|ref|ZP_16330303.1| probable ubiquinone biosynthesis protein ubib [Ralstonia
           solanacearum MolK2]
 gi|206591146|emb|CAQ56758.1| probable ubiquinone biosynthesis protein ubib [Ralstonia
           solanacearum MolK2]
 gi|206593698|emb|CAQ60625.1| probable ubiquinone biosynthesis protein ubib [Ralstonia
           solanacearum IPO1609]
          Length = 525

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 186/396 (46%), Gaps = 27/396 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+  +L++L  + P          +ER+ G+ LS 
Sbjct: 56  ALEQLGPIFVKFGQVLSTRRDLLPPDVADELAKLQDRVPPFDPKVAAAIVERSLGKPLSA 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +F  F+  PVAS SIAQVH A+LR    G       VAVKV  PG+   I  D  ++ ++
Sbjct: 116 LFHRFDHHPVASASIAQVHFATLR----GGPDDGREVAVKVLRPGMLPVIDSDLALMRDV 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 172 ATWMEKLWADGKRLKPREVVAEFDKYLHDELDLMREAANASQLRRNFANSDLLLVPEVFW 231

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 V V     G  +S +  EL+        LA  G       +  D F HADMHPG
Sbjct: 232 DWCTSEVFVMERMHGVRIS-HAAELREAGVDMHKLARDGVEIFFTQVFRDGFFHADMHPG 290

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV VA +   +          I LD G+   LS+ D+  L + F A  +RD    A  
Sbjct: 291 NILVSVAPESFGR---------YIALDFGIVGALSEFDKNYLAQNFLAFFQRDYHRVA-- 339

Query: 522 TLRLSKQQNCPNPKAF-IEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
              L   ++   P+A  +EE++ A       ++  P G+ +     + +L +  RR  V 
Sbjct: 340 ---LLHVESGWAPEATRVEELEGAIRACCEPYFDRPLGE-ISLGLVLMRLFQTSRRFNVE 395

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 396 VQPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAKPFL 431


>gi|349610326|ref|ZP_08889681.1| ubiquinone biosynthesis protein ubiB [Neisseria sp. GT4A_CT1]
 gi|348610209|gb|EGY59907.1| ubiquinone biosynthesis protein ubiB [Neisseria sp. GT4A_CT1]
          Length = 503

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 179/394 (45%), Gaps = 29/394 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP FIK+GQ  +TRPDL P D   +L++L  + P      ++  IE++ G+ +  +
Sbjct: 58  LESLGPIFIKFGQVLSTRPDLIPYDYAVELAKLQDQVPPFDAQLSRSQIEKSLGQSIETL 117

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL-A 342
           +  FE  PVAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   A
Sbjct: 118 YAEFETEPVASASIAQVHKARL---HSGEQ-----VAVKVLRPNLLPVIEQDLSLMRFGA 169

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           A +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF+    +  PK  Y 
Sbjct: 170 AWVERLFADGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSNMLIVPKVFYD 229

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VL   +  G  VS  + +L+        LA  G       +  D F HADMHPGN
Sbjct: 230 YCTSDVLTIEWMDGTPVSE-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGN 288

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           ILV    +              I LD G+   L+  D+  L   F A   RD    A   
Sbjct: 289 ILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYHRVATAH 335

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +         +A +  V E    +  P   +      + +L E  RR  V +   
Sbjct: 336 IESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQPQ 392

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 393 LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|386334591|ref|YP_006030762.1| ubiquinone biosynthesis protein UbiB [Ralstonia solanacearum Po82]
 gi|334197041|gb|AEG70226.1| ubiquinone biosynthesis protein UbiB [Ralstonia solanacearum Po82]
          Length = 525

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 186/396 (46%), Gaps = 27/396 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+  +L++L  + P          +ER+ G+ LS 
Sbjct: 56  ALEQLGPIFVKFGQVLSTRRDLLPPDVADELAKLQDRVPPFDPKVAAAIVERSLGKPLSA 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +F  F+  PVAS SIAQVH A+LR    G       VAVKV  PG+   I  D  ++ ++
Sbjct: 116 LFHRFDHHPVASASIAQVHFATLR----GGPDDGREVAVKVLRPGMLPVIDSDLALMRDV 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 172 ATWMEKLWADGKRLKPREVVAEFDKYLHDELDLMREAANASQLRRNFANSDLLLVPEVFW 231

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 V V     G  +S +  EL+        LA  G       +  D F HADMHPG
Sbjct: 232 DWCTSEVFVMERMHGVRIS-HAAELREAGVDMHKLARDGVEIFFTQVFRDGFFHADMHPG 290

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV VA +   +          I LD G+   LS+ D+  L + F A  +RD    A  
Sbjct: 291 NILVSVAPESFGR---------YIALDFGIVGALSEFDKNYLAQNFLAFFQRDYHRVA-- 339

Query: 522 TLRLSKQQNCPNPKAF-IEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
              L   ++   P+A  +EE++ A       ++  P G+ +     + +L +  RR  V 
Sbjct: 340 ---LLHVESGWAPEATRVEELEGAIRACCEPYFDRPLGE-ISLGLVLMRLFQTSRRFNVE 395

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 396 VQPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAKPFL 431


>gi|451812666|ref|YP_007449119.1| ubiquinone biosynthesis protein [Candidatus Kinetoplastibacterium
           blastocrithidii TCC012E]
 gi|451778635|gb|AGF49515.1| ubiquinone biosynthesis protein [Candidatus Kinetoplastibacterium
           blastocrithidii TCC012E]
          Length = 513

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 196/404 (48%), Gaps = 31/404 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  + R DL P D+  +L+ L+ K    S       IE +FG+ +  +
Sbjct: 57  LEKLGPLFVKLGQSLSGRNDLLPDDITLELAVLYDKVSPFSSNEVISCIENSFGKPIDIL 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F E P A+ S+AQVH A++   + G++     VAVKV  PG+ E I RD  ++   +
Sbjct: 117 FLSFNEIPAAAASVAQVHFATI---HDGRE-----VAVKVLRPGILELIDRDLALLRFLS 168

Query: 344 KISSVI-PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF----RRWKDVSFPK 398
           KI +        L+L E + +F  ++  ++DL  EAA+ S+   NF    +R + +  P 
Sbjct: 169 KIINFFWSDSNRLKLKEVIDEFDKYLHKEIDLKCEAANCSQIRSNFNSDPQRKEMLIVPN 228

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
            ++ L + +VL      G  +++ +D L+      S LA+ G H  L  +  D F HADM
Sbjct: 229 IIWDLTNSSVLTMERMYGIPINQ-IDNLRNVGLNTSDLAYRGIHIFLLQVFEDGFFHADM 287

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI +      S  +  F S    I LD G+   LS +D+  L +   A   +D ++ 
Sbjct: 288 HPGNIYI------SYDRNTFGS---YIALDFGIVGCLSDSDKNYLAQNLVAFFHKDYKSV 338

Query: 519 AECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
           A+  +    +S+     + ++ I  V E   ++G P  +L    + + +L +  R   + 
Sbjct: 339 AKLHIESGWVSRDTIVEDLESSIRTVCE--PYFGKPLSEL-SIGKLLLKLFQVSRSFNME 395

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           V   +  +  T L +E    +LDP  N+ +T +  L K  W +S
Sbjct: 396 VQSQLVLLQKTLLNVESLGIQLDPTLNLWETAKPYLEK--WLRS 437


>gi|372272291|ref|ZP_09508339.1| 2-polyprenylphenol 6-hydroxylase [Marinobacterium stanieri S30]
          Length = 543

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 181/392 (46%), Gaps = 25/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK+GQ  +TR DL P DL ++L+ L  + P    A  ++ IER   + +SEI
Sbjct: 59  LEALGPVFIKFGQMLSTRRDLLPDDLAEELARLQDRVPPFEGARARQIIERELKQPVSEI 118

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  FE+ P+AS S+AQVH A+L+    G+      V VKV  PG+G  IR+D  ++ L A
Sbjct: 119 FAVFEQEPMASASVAQVHAATLK---NGRS-----VVVKVIRPGIGRVIRQDVALLYLLA 170

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           + +  +    + LR  E V ++   +  ++DL +EAA+ S+   NF     +  P+  + 
Sbjct: 171 RLVQKLWVEGRRLRPVEVVAEYEQTIFDELDLRKEAANGSQLRRNFEGSGILYVPEIFWD 230

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VLV     G  V+  V +L+        LA  G       +  D+F HADMHPGN
Sbjct: 231 HTRQQVLVMERIHGVPVAD-VAQLRAQGTDMKCLAERGVEIFFTQVFRDSFFHADMHPGN 289

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V          R   S P  I +D G+   L+  D+  L     A  +RD R  A+  
Sbjct: 290 IFV---------SRDNPSDPQYIAVDFGIIGSLNAEDQNYLARNILAFFKRDYRQVAQLH 340

Query: 523 LRLSKQQNCPNPKAF---IEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +         N  AF   I  V E    +  P  D+      +  L +  RR  + V   
Sbjct: 341 IDSGWVPRDTNVHAFETAIRSVCE--PIFEKPLKDISF-GMVLLGLFQTARRFNMEVQPQ 397

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L P  ++  T +  L
Sbjct: 398 LVLLQKTLLNIEGLGRQLYPDLDLWQTAKPFL 429


>gi|421550105|ref|ZP_15996110.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 69166]
 gi|433470854|ref|ZP_20428249.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 68094]
 gi|433477400|ref|ZP_20434722.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 70012]
 gi|433525555|ref|ZP_20482192.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 69096]
 gi|433538421|ref|ZP_20494904.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 70030]
 gi|402330320|gb|EJU65667.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 69166]
 gi|432210514|gb|ELK66472.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 68094]
 gi|432215784|gb|ELK71668.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 70012]
 gi|432262387|gb|ELL17627.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 69096]
 gi|432274933|gb|ELL30012.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 70030]
          Length = 503

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 180/395 (45%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G+ + +
Sbjct: 57  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQSIEK 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL- 341
           ++  FE  P+AS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 117 LYAEFETEPIASASIAQVHKARL---HSGER-----VAVKVLRPNLLPLIEQDLSLMRFG 168

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +  +    + L+  E V +F  ++  ++DL REAA+  +   NF     +  PK  Y
Sbjct: 169 AAWVERLFSDGRRLKPLEVVAEFGKYLHDELDLMREAANAGQLGRNFHNSNMLIVPKVFY 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  V+  + +L+        LA  G       +  D F HADMHPG
Sbjct: 229 DYCTSDVLTIEWMDGTPVAD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD R  A  
Sbjct: 288 NILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA 334

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A +  V E    +  P   +      + +L E  RR  V +  
Sbjct: 335 HIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQP 391

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 392 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|388455002|ref|ZP_10137297.1| ubiquinone biosynthesis protein [Fluoribacter dumoffii Tex-KL]
          Length = 549

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 183/404 (45%), Gaps = 31/404 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           ++LE  GP FIK+GQ  +TRPD+ P D+  +LS+L  K P          IE+A+G    
Sbjct: 60  KSLEELGPIFIKFGQALSTRPDILPLDIALELSKLQDKVPPFPSEQAMAIIEKAYGLSPY 119

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           E+F  F+  P+AS S+AQVH A+L+    G+      V VKV  P +   I +D  I++ 
Sbjct: 120 EVFAEFDSVPLASASMAQVHAATLK---TGED-----VIVKVLRPNMRRIIEQDLSIMHT 171

Query: 342 AAKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
            A+ +    P ++ L+  E V +F   ++ ++DL REAA+ ++   NF     +  P+  
Sbjct: 172 IARWADRYWPEIRRLKPKEIVTEFEHTLIDELDLLREAANGAQLRRNFDHSPILYIPEIY 231

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +      V+V     G  VS  V  L  H      LA  G       +  D F HADMHP
Sbjct: 232 WDYSRANVMVLERIHGIPVSD-VASLHAHGVDIKKLAERGVEIFFTQVFRDCFFHADMHP 290

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V     K          P  I +D G+   L+ +D+  L E   A   RD R  A+
Sbjct: 291 GNIFVSYDNPKD---------PQYICIDFGIMGTLNDSDKRYLAENLLAFFNRDYRRVAQ 341

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
               L  +         IEE + A        +  P  D+   A+ + +L +  RR  + 
Sbjct: 342 ----LHVESGWVARDTRIEEFESAIRTVCEPIFERPLKDISF-AQVVLRLFQVARRFHME 396

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           V   +  +  T L +EG  R+L P  ++  T +  L K  W K 
Sbjct: 397 VQPQLVLLQKTLLAVEGLGRQLYPDLDLWSTAKPFLEK--WVKD 438


>gi|257881475|ref|ZP_05661128.1| ABC1 family protein [Enterococcus faecium 1,231,502]
 gi|257890697|ref|ZP_05670350.1| ABC1 family protein [Enterococcus faecium 1,231,410]
 gi|293560258|ref|ZP_06676755.1| protein kinase, ABC1 family [Enterococcus faecium E1162]
 gi|294621792|ref|ZP_06700951.1| protein kinase, ABC1 family [Enterococcus faecium U0317]
 gi|383327535|ref|YP_005353419.1| ABC1 family protein [Enterococcus faecium Aus0004]
 gi|415892436|ref|ZP_11549924.1| protein kinase, ABC1 family [Enterococcus faecium E4453]
 gi|430831939|ref|ZP_19449987.1| ubiquinone biosynthesis protein [Enterococcus faecium E0333]
 gi|430847432|ref|ZP_19465269.1| ubiquinone biosynthesis protein [Enterococcus faecium E1133]
 gi|430855631|ref|ZP_19473339.1| ubiquinone biosynthesis protein [Enterococcus faecium E1392]
 gi|431544301|ref|ZP_19518597.1| ubiquinone biosynthesis protein [Enterococcus faecium E1731]
 gi|431749303|ref|ZP_19538045.1| ubiquinone biosynthesis protein [Enterococcus faecium E2297]
 gi|431755819|ref|ZP_19544464.1| ubiquinone biosynthesis protein [Enterococcus faecium E2883]
 gi|431767955|ref|ZP_19556398.1| ubiquinone biosynthesis protein [Enterococcus faecium E1321]
 gi|431769541|ref|ZP_19557949.1| ubiquinone biosynthesis protein [Enterococcus faecium E1644]
 gi|431773399|ref|ZP_19561724.1| ubiquinone biosynthesis protein [Enterococcus faecium E2369]
 gi|431776497|ref|ZP_19564758.1| ubiquinone biosynthesis protein [Enterococcus faecium E2560]
 gi|431779585|ref|ZP_19567778.1| ubiquinone biosynthesis protein [Enterococcus faecium E4389]
 gi|431782610|ref|ZP_19570743.1| ubiquinone biosynthesis protein [Enterococcus faecium E6012]
 gi|431784437|ref|ZP_19572476.1| ubiquinone biosynthesis protein [Enterococcus faecium E6045]
 gi|257817133|gb|EEV44461.1| ABC1 family protein [Enterococcus faecium 1,231,502]
 gi|257827057|gb|EEV53683.1| ABC1 family protein [Enterococcus faecium 1,231,410]
 gi|291598624|gb|EFF29682.1| protein kinase, ABC1 family [Enterococcus faecium U0317]
 gi|291605708|gb|EFF35145.1| protein kinase, ABC1 family [Enterococcus faecium E1162]
 gi|364093332|gb|EHM35612.1| protein kinase, ABC1 family [Enterococcus faecium E4453]
 gi|378937229|gb|AFC62301.1| ABC1 family protein [Enterococcus faecium Aus0004]
 gi|430480580|gb|ELA57754.1| ubiquinone biosynthesis protein [Enterococcus faecium E0333]
 gi|430537052|gb|ELA77405.1| ubiquinone biosynthesis protein [Enterococcus faecium E1133]
 gi|430546686|gb|ELA86629.1| ubiquinone biosynthesis protein [Enterococcus faecium E1392]
 gi|430592413|gb|ELB30428.1| ubiquinone biosynthesis protein [Enterococcus faecium E1731]
 gi|430611731|gb|ELB48807.1| ubiquinone biosynthesis protein [Enterococcus faecium E2297]
 gi|430616434|gb|ELB53348.1| ubiquinone biosynthesis protein [Enterococcus faecium E2883]
 gi|430630043|gb|ELB66420.1| ubiquinone biosynthesis protein [Enterococcus faecium E1321]
 gi|430636646|gb|ELB72710.1| ubiquinone biosynthesis protein [Enterococcus faecium E2369]
 gi|430636855|gb|ELB72909.1| ubiquinone biosynthesis protein [Enterococcus faecium E1644]
 gi|430640816|gb|ELB76644.1| ubiquinone biosynthesis protein [Enterococcus faecium E2560]
 gi|430641686|gb|ELB77481.1| ubiquinone biosynthesis protein [Enterococcus faecium E4389]
 gi|430647247|gb|ELB82695.1| ubiquinone biosynthesis protein [Enterococcus faecium E6012]
 gi|430649532|gb|ELB84908.1| ubiquinone biosynthesis protein [Enterococcus faecium E6045]
          Length = 581

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 180/419 (42%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 35  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 94

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+            V VK++HP + E IR D  + 
Sbjct: 95  LSDIFDDFSKSPFASASMGQAHRAKLK--------NGDAVVVKIQHPNIAEEIRLDLQLF 146

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 147 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 206

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++     E         +LK  +A +     +K +  
Sbjct: 207 YDAFCSKKVIVMEEMSGKNLNHLMNAENKTETFITGIQNKQLKQEVAKLLVENFMKQVFD 266

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V     Q ++S+K             FR+         P+ I +
Sbjct: 267 DGFFHADPHPGNLLFHVLTKEEQTQASRKTETVHEKEFGSFAFRASTSAEDPVAPYTINY 326

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 327 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 386

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 387 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 445


>gi|430834760|ref|ZP_19452762.1| ubiquinone biosynthesis protein [Enterococcus faecium E0679]
 gi|430484829|gb|ELA61776.1| ubiquinone biosynthesis protein [Enterococcus faecium E0679]
          Length = 581

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 182/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 35  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 94

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 95  LSDIFDDFSKSPFASASMGQAHRAKLK---NGDS-----VVVKIQHPNIAEEIRLDLQLF 146

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 147 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 206

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++     E         +LK  +A +     +K +  
Sbjct: 207 YDAFCSKKVIVMEEMSGKNLNHLMNAENKTETFITGIQNKQLKQEVAKLLVENFMKQVFD 266

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V     Q ++S+K             FR+         P+ I +
Sbjct: 267 DGFFHADPHPGNLLFHVLTKEEQTQASRKTETVHEKEFGSFAFRASTSTEDPVAPYTINY 326

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 327 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 386

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E   +++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 387 QYYDSPIDEINLQEVFTRVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 445


>gi|314948185|ref|ZP_07851579.1| ABC1 family protein [Enterococcus faecium TX0082]
 gi|424819377|ref|ZP_18244484.1| ABC1 family protein [Enterococcus faecium R501]
 gi|424856318|ref|ZP_18280557.1| ABC1 family protein [Enterococcus faecium R499]
 gi|424967916|ref|ZP_18381586.1| ABC1 family protein [Enterococcus faecium P1140]
 gi|424976044|ref|ZP_18389162.1| ABC1 family protein [Enterococcus faecium P1137]
 gi|424981966|ref|ZP_18394656.1| ABC1 family protein [Enterococcus faecium ERV99]
 gi|424984731|ref|ZP_18397250.1| ABC1 family protein [Enterococcus faecium ERV69]
 gi|424997410|ref|ZP_18409172.1| ABC1 family protein [Enterococcus faecium ERV165]
 gi|425000500|ref|ZP_18412059.1| ABC1 family protein [Enterococcus faecium ERV161]
 gi|425003232|ref|ZP_18414609.1| ABC1 family protein [Enterococcus faecium ERV102]
 gi|425011164|ref|ZP_18422076.1| ABC1 family protein [Enterococcus faecium E422]
 gi|425013768|ref|ZP_18424484.1| ABC1 family protein [Enterococcus faecium E417]
 gi|425022461|ref|ZP_18432642.1| ABC1 family protein [Enterococcus faecium C497]
 gi|425044370|ref|ZP_18448533.1| ABC1 family protein [Enterococcus faecium 510]
 gi|313645318|gb|EFS09898.1| ABC1 family protein [Enterococcus faecium TX0082]
 gi|402926238|gb|EJX46290.1| ABC1 family protein [Enterococcus faecium R501]
 gi|402930198|gb|EJX49877.1| ABC1 family protein [Enterococcus faecium R499]
 gi|402952002|gb|EJX69863.1| ABC1 family protein [Enterococcus faecium P1137]
 gi|402953335|gb|EJX71060.1| ABC1 family protein [Enterococcus faecium P1140]
 gi|402962165|gb|EJX79134.1| ABC1 family protein [Enterococcus faecium ERV99]
 gi|402967952|gb|EJX84463.1| ABC1 family protein [Enterococcus faecium ERV69]
 gi|402986310|gb|EJY01441.1| ABC1 family protein [Enterococcus faecium ERV165]
 gi|402988974|gb|EJY03938.1| ABC1 family protein [Enterococcus faecium ERV161]
 gi|402992428|gb|EJY07136.1| ABC1 family protein [Enterococcus faecium ERV102]
 gi|402997717|gb|EJY12026.1| ABC1 family protein [Enterococcus faecium E422]
 gi|403000332|gb|EJY14459.1| ABC1 family protein [Enterococcus faecium E417]
 gi|403002694|gb|EJY16641.1| ABC1 family protein [Enterococcus faecium C497]
 gi|403029938|gb|EJY41659.1| ABC1 family protein [Enterococcus faecium 510]
          Length = 583

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 180/419 (42%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 37  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 96

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+            V VK++HP + E IR D  + 
Sbjct: 97  LSDIFDDFSKSPFASASMGQAHRAKLK--------NGDAVVVKIQHPNIAEEIRLDLQLF 148

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 149 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 208

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++     E         +LK  +A +     +K +  
Sbjct: 209 YDAFCSKKVIVMEEMSGKNLNHLMNAENKTETFITGIQNKQLKQEVAKLLVENFMKQVFD 268

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V     Q ++S+K             FR+         P+ I +
Sbjct: 269 DGFFHADPHPGNLLFHVLTKEEQTQASRKTETVHEKEFGSFAFRASTSAEDPVAPYTINY 328

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 329 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 388

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 389 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 447


>gi|389606392|emb|CCA45305.1| putative ubiquinone biosynthesis protein UbiB [Neisseria
           meningitidis alpha522]
          Length = 503

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 181/395 (45%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G+ + +
Sbjct: 57  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQSIEK 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL- 341
           ++  FE  P+AS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 117 LYAEFETEPIASASIAQVHKARL---HSGER-----VAVKVLRPNLLPLIEQDLSLMRFG 168

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +  +    + L+  E V +F  ++  ++DL REAA+  +   NF+    +  PK  Y
Sbjct: 169 AAWVERLFSDGRRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFQNSNMLIVPKVFY 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  V+  + +L+        LA  G       +  D F HADMHPG
Sbjct: 229 DYCTSDVLTIEWMDGTPVAD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD R  A  
Sbjct: 288 NILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA 334

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A +  V E    +  P   +      + +L E  RR  V +  
Sbjct: 335 HIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQP 391

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 392 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|69248311|ref|ZP_00604713.1| ABC-1 [Enterococcus faecium DO]
 gi|389867360|ref|YP_006374783.1| ubiquinone biosynthesis protein UbiB [Enterococcus faecium DO]
 gi|416131876|ref|ZP_11597784.1| protein kinase, ABC1 family [Enterococcus faecium E4452]
 gi|424795452|ref|ZP_18221307.1| ABC1 family protein [Enterococcus faecium S447]
 gi|424949234|ref|ZP_18364924.1| ABC1 family protein [Enterococcus faecium R496]
 gi|424956292|ref|ZP_18371080.1| ABC1 family protein [Enterococcus faecium R446]
 gi|424987726|ref|ZP_18400087.1| ABC1 family protein [Enterococcus faecium ERV38]
 gi|424990964|ref|ZP_18403150.1| ABC1 family protein [Enterococcus faecium ERV26]
 gi|424995507|ref|ZP_18407383.1| ABC1 family protein [Enterococcus faecium ERV168]
 gi|425006607|ref|ZP_18417777.1| ABC1 family protein [Enterococcus faecium ERV1]
 gi|425017563|ref|ZP_18428064.1| ABC1 family protein [Enterococcus faecium C621]
 gi|425030174|ref|ZP_18435377.1| ABC1 family protein [Enterococcus faecium C1904]
 gi|425033451|ref|ZP_18438419.1| ABC1 family protein [Enterococcus faecium 515]
 gi|68194455|gb|EAN08956.1| ABC-1 [Enterococcus faecium DO]
 gi|364093514|gb|EHM35779.1| protein kinase, ABC1 family [Enterococcus faecium E4452]
 gi|388532609|gb|AFK57801.1| ubiquinone biosynthesis protein UbiB [Enterococcus faecium DO]
 gi|402924390|gb|EJX44602.1| ABC1 family protein [Enterococcus faecium S447]
 gi|402934934|gb|EJX54228.1| ABC1 family protein [Enterococcus faecium R496]
 gi|402946396|gb|EJX64677.1| ABC1 family protein [Enterococcus faecium R446]
 gi|402973748|gb|EJX89848.1| ABC1 family protein [Enterococcus faecium ERV38]
 gi|402977159|gb|EJX92998.1| ABC1 family protein [Enterococcus faecium ERV168]
 gi|402978218|gb|EJX93976.1| ABC1 family protein [Enterococcus faecium ERV26]
 gi|402996955|gb|EJY11311.1| ABC1 family protein [Enterococcus faecium ERV1]
 gi|403004084|gb|EJY17914.1| ABC1 family protein [Enterococcus faecium C621]
 gi|403004116|gb|EJY17944.1| ABC1 family protein [Enterococcus faecium C1904]
 gi|403009949|gb|EJY23362.1| ABC1 family protein [Enterococcus faecium 515]
          Length = 582

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 180/419 (42%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 36  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 95

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+            V VK++HP + E IR D  + 
Sbjct: 96  LSDIFDDFSKSPFASASMGQAHRAKLK--------NGDAVVVKIQHPNIAEEIRLDLQLF 147

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 148 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 207

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++     E         +LK  +A +     +K +  
Sbjct: 208 YDAFCSKKVIVMEEMSGKNLNHLMNAENKTETFITGIQNKQLKQEVAKLLVENFMKQVFD 267

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V     Q ++S+K             FR+         P+ I +
Sbjct: 268 DGFFHADPHPGNLLFHVLTKEEQTQASRKTETVHEKEFGSFAFRASTSAEDPVAPYTINY 327

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 328 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 387

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 388 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 446


>gi|307105843|gb|EFN54091.1| hypothetical protein CHLNCDRAFT_136214 [Chlorella variabilis]
          Length = 570

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/225 (36%), Positives = 116/225 (51%), Gaps = 25/225 (11%)

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
             PAVLVET+E G  +S YV    G     S LA +G   +L M++VDN IHAD+HPGNI
Sbjct: 293 TQPAVLVETFEAGTHISAYVARGAGAPH-NSELAKLGARTMLHMMIVDNLIHADLHPGNI 351

Query: 464 LVRVAQKKSSQKRLFR---------------------SKPHVIFLDVGMTAELSKTDRVN 502
           LV +        RL R                      +  ++ LD GM   L+  D+ N
Sbjct: 352 LVTLDWPFGGANRLVRLGRRLAVAAGLQGAVDWLDGWQRAKLVLLDAGMAMRLTPEDQRN 411

Query: 503 LVEFFKAVARRDGRTAAECTLRLS-KQQNCPNPKAFIEEVDEAFAFWGTPEG--DLVHPA 559
           +   F+A A  DG   A   LR S ++Q+CP+P AF+ +V   F             H A
Sbjct: 412 MFGLFEAFAEMDGSRLAHWALRFSGEEQSCPDPAAFVSDVASFFERLTAESAATGATHGA 471

Query: 560 ECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
           + + ++LE VR H VN+ G++C  +VTT+VLEGW  KLDP ++ +
Sbjct: 472 DALAEVLELVRTHAVNMPGHICATVVTTMVLEGWSNKLDPNHSTL 516



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 43/65 (66%)

Query: 195 FSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLS 254
           F+P ++ AP    F    R  WL ++  TLE AGPAFIKWGQWAATR DLFP D C +L 
Sbjct: 230 FAPVVLTAPLVGDFLGISRARWLRLLRWTLERAGPAFIKWGQWAATRHDLFPPDFCSELE 289

Query: 255 ELHSK 259
            LH++
Sbjct: 290 LLHTQ 294


>gi|253997186|ref|YP_003049250.1| putative ubiquinone biosynthesis protein UbiB [Methylotenera
           mobilis JLW8]
 gi|253983865|gb|ACT48723.1| 2-polyprenylphenol 6-hydroxylase [Methylotenera mobilis JLW8]
          Length = 516

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 176/393 (44%), Gaps = 27/393 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+  +L++L  + P  SFA  +  I +AF   L++ 
Sbjct: 56  LEALGPIFVKFGQMLSTRRDLIPADIADELAKLQDQVPPFSFAEVENIITQAFNEPLAQR 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-LA 342
           F  F+E PVAS S+AQVH A L    P        VAVKV  P + ++I  D ++++  A
Sbjct: 116 FSQFDETPVASASVAQVHFAHLPHGEP--------VAVKVLRPNIEKTIAHDLLLMDTFA 167

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             + S+    K L+  E V +FA    S++DL  EAA+ S    NF     +  P   + 
Sbjct: 168 LVLQSISAEFKRLKPREIVAEFARHTESELDLTLEAANCSLLGRNFADKSMLIVPDVHWD 227

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                V+V     G  +S+  D L       S LA  G       +  D F HADMHPGN
Sbjct: 228 WCRKEVMVMQRMYGTQISQR-DALVAKGIDTSKLARDGVEIFFTQVFRDGFFHADMHPGN 286

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I +    K              I LD G+   L++ D+  L   F A   RD R  A+  
Sbjct: 287 IQIADDGK-------------YIALDFGIMGALNEVDKYYLARNFLAFFNRDYRDVAQAH 333

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFA--FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
           +  S        +  +E    A     +  P  D+   A  +  L +  RR  V +   +
Sbjct: 334 ID-SGWVPADTKREELETAVRAICEPIFNKPLKDISF-ARTLLSLFQMARRFGVIIQPQL 391

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +  T L +EG  R+LDP  ++  + Q  L +
Sbjct: 392 IMLQKTLLNIEGLSRELDPNLDLWKSAQPFLTR 424


>gi|314943520|ref|ZP_07850287.1| ABC1 family protein [Enterococcus faecium TX0133C]
 gi|314991592|ref|ZP_07857068.1| ABC1 family protein [Enterococcus faecium TX0133B]
 gi|314994925|ref|ZP_07860052.1| ABC1 family protein [Enterococcus faecium TX0133a01]
 gi|313590907|gb|EFR69752.1| ABC1 family protein [Enterococcus faecium TX0133a01]
 gi|313593876|gb|EFR72721.1| ABC1 family protein [Enterococcus faecium TX0133B]
 gi|313597892|gb|EFR76737.1| ABC1 family protein [Enterococcus faecium TX0133C]
          Length = 582

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 180/419 (42%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 36  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 95

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+            V VK++HP + E IR D  + 
Sbjct: 96  LSDIFDDFSKSPFASASMGQAHRAKLK--------NGDAVVVKIQHPNIAEEIRLDLQLF 147

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 148 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 207

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++     E         +LK  +A +     +K +  
Sbjct: 208 YDAFCSKKVIVMEEMSGKNLNHLMNAENKTETFITGIQNKQLKQEVAKLLVENFMKQVFD 267

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V     Q ++S+K             FR+         P+ I +
Sbjct: 268 DGFFHADPHPGNLLFHVLTKEEQTQASRKTETVHEKEFGSFAFRASTSAEEPVAPYTINY 327

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 328 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 387

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 388 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 446


>gi|334132473|ref|ZP_08506230.1| 2-polyprenylphenol 6-hydroxylase [Methyloversatilis universalis
           FAM5]
 gi|333442439|gb|EGK70409.1| 2-polyprenylphenol 6-hydroxylase [Methyloversatilis universalis
           FAM5]
          Length = 508

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 182/394 (46%), Gaps = 29/394 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + LE  GP F+K+GQ  +TR DL P DL  +L++L  + P          +E  +GR L+
Sbjct: 54  QALEALGPIFVKFGQMLSTRRDLLPPDLADELAKLQDRVPPFPSEQAIARLEAFYGRPLA 113

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           ++F  FE  PVAS S+AQVH A L     G++     VAVKV  PG+   I  D  ++  
Sbjct: 114 QVFARFETQPVASASVAQVHFALL---PSGEE-----VAVKVLRPGIEHIIANDIALMET 165

Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           AA  +  V    + L+  E V +F+  +  ++DL REA++ S+   NFR    +S P+  
Sbjct: 166 AAALLERVWSEGRRLKAREVVAEFSKHLGDELDLMREASNCSQLRRNFRDSPLLSVPEVY 225

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +    P  +V     G  +S+ VD L+      +AL+  G       +  D F HADMHP
Sbjct: 226 WDYCGPTAMVMQRMHGLPISQ-VDALRAQGVDMAALSRAGVEIFFTQVFRDGFFHADMHP 284

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V                   I LD G+   L+  D+  L + F A  +RD +  A+
Sbjct: 285 GNIFV-------------APDGQYIALDFGIMGTLTDVDKNYLAQNFLAFFQRDYKRVAQ 331

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             +    + +       +A I  V E    +  P  + +     + +L +  RR  V + 
Sbjct: 332 AHVDAGWVPRGTRVDEFEAAIRAVCE--PIFDKPLKE-IEFGRTLLRLFQVSRRFNVEIQ 388

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 389 PQLVMLQKTLLNIEGLGRQLDPDLDLWKTAKPFL 422


>gi|406579291|ref|ZP_11054523.1| ABC1 family protein [Enterococcus sp. GMD4E]
 gi|406581591|ref|ZP_11056728.1| ABC1 family protein [Enterococcus sp. GMD3E]
 gi|406584030|ref|ZP_11059068.1| ABC1 family protein [Enterococcus sp. GMD2E]
 gi|406589822|ref|ZP_11064242.1| ABC1 family protein [Enterococcus sp. GMD1E]
 gi|410938069|ref|ZP_11369927.1| ubiquinone biosynthesis protein UbiB [Enterococcus sp. GMD5E]
 gi|427397056|ref|ZP_18889682.1| hypothetical protein HMPREF9307_01858 [Enterococcus durans
           FB129-CNAB-4]
 gi|430843172|ref|ZP_19461073.1| ubiquinone biosynthesis protein [Enterococcus faecium E1050]
 gi|430861432|ref|ZP_19478939.1| ubiquinone biosynthesis protein [Enterococcus faecium E1573]
 gi|430952629|ref|ZP_19486435.1| ubiquinone biosynthesis protein [Enterococcus faecium E1576]
 gi|431000763|ref|ZP_19488244.1| ubiquinone biosynthesis protein [Enterococcus faecium E1578]
 gi|431234140|ref|ZP_19502909.1| ubiquinone biosynthesis protein [Enterococcus faecium E1622]
 gi|431256498|ref|ZP_19504853.1| ubiquinone biosynthesis protein [Enterococcus faecium E1623]
 gi|431303427|ref|ZP_19508274.1| ubiquinone biosynthesis protein [Enterococcus faecium E1626]
 gi|431725204|ref|ZP_19525413.1| ubiquinone biosynthesis protein [Enterococcus faecium E1904]
 gi|404455596|gb|EKA02440.1| ABC1 family protein [Enterococcus sp. GMD4E]
 gi|404459357|gb|EKA05723.1| ABC1 family protein [Enterococcus sp. GMD3E]
 gi|404464927|gb|EKA10440.1| ABC1 family protein [Enterococcus sp. GMD2E]
 gi|404470262|gb|EKA14913.1| ABC1 family protein [Enterococcus sp. GMD1E]
 gi|410733708|gb|EKQ75631.1| ubiquinone biosynthesis protein UbiB [Enterococcus sp. GMD5E]
 gi|425722382|gb|EKU85277.1| hypothetical protein HMPREF9307_01858 [Enterococcus durans
           FB129-CNAB-4]
 gi|430497921|gb|ELA73938.1| ubiquinone biosynthesis protein [Enterococcus faecium E1050]
 gi|430549897|gb|ELA89707.1| ubiquinone biosynthesis protein [Enterococcus faecium E1573]
 gi|430557228|gb|ELA96696.1| ubiquinone biosynthesis protein [Enterococcus faecium E1576]
 gi|430562422|gb|ELB01654.1| ubiquinone biosynthesis protein [Enterococcus faecium E1578]
 gi|430573166|gb|ELB11996.1| ubiquinone biosynthesis protein [Enterococcus faecium E1622]
 gi|430577600|gb|ELB16187.1| ubiquinone biosynthesis protein [Enterococcus faecium E1623]
 gi|430580068|gb|ELB18548.1| ubiquinone biosynthesis protein [Enterococcus faecium E1626]
 gi|430595851|gb|ELB33729.1| ubiquinone biosynthesis protein [Enterococcus faecium E1904]
          Length = 581

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 182/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 35  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 94

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 95  LSDIFDDFSKSPFASASMGQAHRAKLK---NGDS-----VVVKIQHPNIAEEIRLDLQLF 146

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 147 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 206

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++     E         +LK  +A +     +K +  
Sbjct: 207 YDAFCSKKVIVMEEMSGKNLNHLMNAENKTETFITGIQNKQLKQEVAKLLVENFMKQVFD 266

Query: 451 DNFIHADMHPGNILVRVAQK----KSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V +K    ++S+K             FR+         P+ I +
Sbjct: 267 DGFFHADPHPGNLLFHVLKKEEQTQASRKTEIVHEKEFGSFAFRASTSTEDPVAPYTINY 326

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 327 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 386

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 387 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 445


>gi|314938929|ref|ZP_07846194.1| ABC1 family protein [Enterococcus faecium TX0133a04]
 gi|314951545|ref|ZP_07854591.1| ABC1 family protein [Enterococcus faecium TX0133A]
 gi|425034927|ref|ZP_18439783.1| ABC1 family protein [Enterococcus faecium 514]
 gi|425040927|ref|ZP_18445361.1| ABC1 family protein [Enterococcus faecium 511]
 gi|425047566|ref|ZP_18451514.1| ABC1 family protein [Enterococcus faecium 509]
 gi|313596239|gb|EFR75084.1| ABC1 family protein [Enterococcus faecium TX0133A]
 gi|313641638|gb|EFS06218.1| ABC1 family protein [Enterococcus faecium TX0133a04]
 gi|403018994|gb|EJY31630.1| ABC1 family protein [Enterococcus faecium 514]
 gi|403027270|gb|EJY39164.1| ABC1 family protein [Enterococcus faecium 511]
 gi|403033361|gb|EJY44867.1| ABC1 family protein [Enterococcus faecium 509]
          Length = 583

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 180/419 (42%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 37  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 96

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+            V VK++HP + E IR D  + 
Sbjct: 97  LSDIFDDFSKSPFASASMGQAHRAKLK--------NGDAVVVKIQHPNIAEEIRLDLQLF 148

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 149 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 208

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++     E         +LK  +A +     +K +  
Sbjct: 209 YDAFCSKKVIVMEEMSGKNLNHLMNAENKTETFITGIQNKQLKQEVAKLLVENFMKQVFD 268

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V     Q ++S+K             FR+         P+ I +
Sbjct: 269 DGFFHADPHPGNLLFHVLTKEEQTQASRKTETVHEKEFGSFAFRASTSAEEPVAPYTINY 328

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 329 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 388

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 389 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 447


>gi|294617800|ref|ZP_06697413.1| protein kinase, ABC1 family [Enterococcus faecium E1679]
 gi|424963602|ref|ZP_18377806.1| ABC1 family protein [Enterococcus faecium P1190]
 gi|425060639|ref|ZP_18463925.1| ABC1 family protein [Enterococcus faecium 503]
 gi|447911695|ref|YP_007393107.1| Ubiquinone biosynthesis monooxygenase UbiB [Enterococcus faecium
           NRRL B-2354]
 gi|291595940|gb|EFF27220.1| protein kinase, ABC1 family [Enterococcus faecium E1679]
 gi|402948697|gb|EJX66812.1| ABC1 family protein [Enterococcus faecium P1190]
 gi|403042421|gb|EJY53376.1| ABC1 family protein [Enterococcus faecium 503]
 gi|445187404|gb|AGE29046.1| Ubiquinone biosynthesis monooxygenase UbiB [Enterococcus faecium
           NRRL B-2354]
          Length = 582

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 182/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 36  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 95

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 96  LSDIFDDFSKSPFASASMGQAHRAKLK---NGDS-----VVVKIQHPNIAEEIRLDLQLF 147

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 148 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 207

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++     E         +LK  +A +     +K +  
Sbjct: 208 YDAFCSKKVIVMEEMSGKNLNHLMNAENKTETFITGIQNKQLKQEVAKLLVENFMKQVFD 267

Query: 451 DNFIHADMHPGNILVRVAQK----KSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V +K    ++S+K             FR+         P+ I +
Sbjct: 268 DGFFHADPHPGNLLFHVLKKEEQTQASRKTEIVHEKEFGSFAFRASTSTEDPVAPYTINY 327

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 328 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 387

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 388 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 446


>gi|431740769|ref|ZP_19529680.1| ubiquinone biosynthesis protein [Enterococcus faecium E2039]
 gi|430602852|gb|ELB40402.1| ubiquinone biosynthesis protein [Enterococcus faecium E2039]
          Length = 581

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 182/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  K+TIE      
Sbjct: 35  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKRTIETELSLS 94

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +S+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 95  VSDIFDDFSKSPFASASMGQAHRAKLK---SGD-----AVVVKIQHPNIAEEIRLDLQLF 146

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 147 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 206

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++   G E         +LK  +A +     +K +  
Sbjct: 207 YDAFCSKKVIVMEEMSGKNLNHLMNAENGTETFITGIQNKQLKQEVAKLLVENFMKQVFD 266

Query: 451 DNFIHADMHPGNILVRVAQKKS-SQKR--------------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V  K+  +Q R               FR+         P+ + +
Sbjct: 267 DGFFHADPHPGNLLFHVLTKEEQTQARRTAETVHEKEFGPFAFRASTSTEDPVAPYTVNY 326

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 327 IDFGMMGHLSADLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGLFDESRFHQELTSFLE 386

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E   Q++    ++ +  D ++  ++     LEG  R LDP  ++++
Sbjct: 387 QYYDSPIDEINLQEVFAQVVMICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLIE 445


>gi|261379959|ref|ZP_05984532.1| 2-polyprenylphenol 6-hydroxylase [Neisseria subflava NJ9703]
 gi|284797157|gb|EFC52504.1| 2-polyprenylphenol 6-hydroxylase [Neisseria subflava NJ9703]
          Length = 503

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 194/442 (43%), Gaps = 36/442 (8%)

Query: 176 YSLVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWG 235
           Y L E +  L+R  +     +    M P +  F  +   + L +    LE+ GP FIK+G
Sbjct: 17  YRLAELIASLVRPGWARTFLN----MLPQSSKFKHEMPAVRLRL---ALESLGPIFIKFG 69

Query: 236 QWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASG 295
           Q  +TRPDL P D   +L+ L  K P      ++  IE++ G+ +  ++  FE  PVAS 
Sbjct: 70  QVLSTRPDLIPHDYAVELARLQDKVPPFDAQLSRSQIEKSLGQSIDTLYAEFETEPVASA 129

Query: 296 SIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK-ISSVIPAVKW 354
           SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   A  +  +    K 
Sbjct: 130 SIAQVHKAHL---HSGEQ-----VAVKVLRPNLLPVIEQDLSLMRFGAGWVERLFSDGKR 181

Query: 355 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE 414
           L+  E V +F  ++  ++DL REAA+ S+   NF+    +  PK  Y      VL   + 
Sbjct: 182 LKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSDMLIVPKVFYDYCTSDVLTIEWM 241

Query: 415 QGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ 474
            G  VS  + +L+        LA  G       +  D F HADMHPGNILV    +    
Sbjct: 242 DGTPVSD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGNILVAADNR---- 296

Query: 475 KRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR---LSKQQNC 531
                     I LD G+   L+  D+  L   F A   RD    A   +    +      
Sbjct: 297 ---------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYHRVATAHIESGWVPADTRA 347

Query: 532 PNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLE 591
              +A +  V E    +  P   +      + +L E  RR  V +   +  +  T L +E
Sbjct: 348 EELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQPQLVLLQKTLLNIE 404

Query: 592 GWQRKLDPGYNVMDTLQTLLLK 613
           G  R+LDP  ++  T +  L++
Sbjct: 405 GLGRQLDPDLDLWKTAKPFLVR 426


>gi|398834765|ref|ZP_10592169.1| 2-polyprenylphenol 6-hydroxylase [Herbaspirillum sp. YR522]
 gi|398220258|gb|EJN06712.1| 2-polyprenylphenol 6-hydroxylase [Herbaspirillum sp. YR522]
          Length = 523

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 187/396 (47%), Gaps = 29/396 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE  GP FIK+GQ  +TR DL P D+  +L+ L  + P          I+++ G   +
Sbjct: 56  RALEDLGPIFIKFGQVLSTRRDLMPPDIANELTRLQDRVPPFDSDLAALQIQKSLGAHPN 115

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           ++F  FE  PVAS SIAQVH A+L+    G++     VA+KV  PG+   I  D  ++++
Sbjct: 116 DLFATFERDPVASASIAQVHFATLK---DGKE-----VAIKVLRPGMRAIIDHDIGLMHV 167

Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           AA     +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  
Sbjct: 168 AADWFERLWADGRRLKAKEVVGEFDKYLHDELDLMREAANASQLRRNFAESTLLMVPEMY 227

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +    P+V+V     G  +S+  + L       + L+  G       +  D F HADMHP
Sbjct: 228 WDYCSPSVIVMERMHGIPISQ-TERLAQEGVDLAKLSRDGVEIFFTQVFRDGFFHADMHP 286

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNILV VA +   +          I LD G+   L+  D+  L + F A  +RD +  AE
Sbjct: 287 GNILVSVAPETFGR---------YIALDFGIVGTLNDFDKDYLSQNFLAFFQRDYKRVAE 337

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
             +    +      +  ++E++ A        +  P  D+    + + +L +  RR  V 
Sbjct: 338 AHI----ESGWAPKETRVDELEAAVRACCEPIFDRPLKDISF-GQVLLRLFQTSRRFNVE 392

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 393 VQPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAKPYL 428


>gi|424789107|ref|ZP_18215816.1| ABC1 family protein [Enterococcus faecium V689]
 gi|424970722|ref|ZP_18384210.1| ABC1 family protein [Enterococcus faecium P1139]
 gi|424978086|ref|ZP_18391035.1| ABC1 family protein [Enterococcus faecium P1123]
 gi|425038205|ref|ZP_18442827.1| ABC1 family protein [Enterococcus faecium 513]
 gi|402922575|gb|EJX42940.1| ABC1 family protein [Enterococcus faecium V689]
 gi|402960762|gb|EJX77863.1| ABC1 family protein [Enterococcus faecium P1139]
 gi|402963117|gb|EJX80009.1| ABC1 family protein [Enterococcus faecium P1123]
 gi|403019901|gb|EJY32475.1| ABC1 family protein [Enterococcus faecium 513]
          Length = 583

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 182/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 37  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 96

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 97  LSDIFDDFSKSPFASASMGQAHRAKLK---NGDS-----VVVKIQHPNIAEEIRLDLQLF 148

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 149 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 208

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++     E         +LK  +A +     +K +  
Sbjct: 209 YDAFCSKKVIVMEEMSGKNLNHLMNAENKTETFITGIQNKQLKQEVAKLLVENFMKQVFD 268

Query: 451 DNFIHADMHPGNILVRVAQK----KSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V +K    ++S+K             FR+         P+ I +
Sbjct: 269 DGFFHADPHPGNLLFHVLKKEEQTQASRKTEIVHEKEFGSFAFRASTSTEDPVAPYTINY 328

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 329 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 388

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 389 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 447


>gi|322688378|ref|YP_004208112.1| hypothetical protein BLIF_0187 [Bifidobacterium longum subsp.
           infantis 157F]
 gi|320459714|dbj|BAJ70334.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 580

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 183/391 (46%), Gaps = 37/391 (9%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  GP F+K GQ  + R ++ P+  C +L++L + A    ++     +   +GR   E+F
Sbjct: 85  EALGPTFVKVGQILSMRSEILPQSFCDELAKLRADADPMPYSTVLDVLAAEYGRPADEVF 144

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
              +  P+ S S+AQVHRA+L+    G+      VA+KV+ PGV E++ +D  I+   AK
Sbjct: 145 AHIDPKPLGSASLAQVHRATLK---TGED-----VAIKVQRPGVRETMAQDVSIMRSIAK 196

Query: 345 ISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            ++ VI   + + L   V++      S+ D   EA +L+ F     R+K +  P     L
Sbjct: 197 AATKVIRTSQIVDLKGVVEELWDTFESETDFLIEARNLAEFKRFAARFKYMDCPTAYTEL 256

Query: 404 VHPAVLVETYEQGECVS---RYVDELQGHERLKSALAHIGTHAL---LKMLLVDNFIHAD 457
               V+V  Y  G  VS   R VD   G++     L  IGT  +      +L D F HAD
Sbjct: 257 CTEHVVVMEYIDGISVSHPGRLVD--AGYD-----LKEIGTKLVDNYATQILDDGFFHAD 309

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGNI++R  Q              ++ +D+GMT  L +  R  L E   AVA++D   
Sbjct: 310 PHPGNIIIRGGQ--------------IVLIDLGMTGRLDQRTRAVLKEMIFAVAKQDSPA 355

Query: 518 AAECTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
            AE  LR +  +  P    A + ++D     +GT +   +  A  +  L +   RH + V
Sbjct: 356 LAEGLLRFAGTEADPEDYPALLADLDVIVKEFGTVDLAELDIAAFLTALTQMAGRHNIEV 415

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
              V TV    + LEG   +  P  N+++ +
Sbjct: 416 PSTVTTVGRALVTLEGLLDEFIPDVNMIEII 446


>gi|424869801|ref|ZP_18293482.1| ABC1 family protein [Enterococcus faecium R497]
 gi|402935187|gb|EJX54457.1| ABC1 family protein [Enterococcus faecium R497]
          Length = 583

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 182/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 37  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 96

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 97  LSDIFDDFSKSPFASASMGQAHRAKLK---NGDS-----VVVKIQHPNIAEEIRLDLQLF 148

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 149 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 208

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++     E         +LK  +A +     +K +  
Sbjct: 209 YDAFCSKKVIVMEEMSGKNLNHLMNAENKTETFITGIQNKQLKQEVAKLLVENFMKQVFD 268

Query: 451 DNFIHADMHPGNILVRVAQK----KSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V +K    ++S+K             FR+         P+ I +
Sbjct: 269 DGFFHADPHPGNLLFHVLKKEEQTQASRKTEIVHEKEFGSFAFRASTSTEDPVAPYTINY 328

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 329 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 388

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 389 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 447


>gi|416163570|ref|ZP_11607082.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis N1568]
 gi|421556659|ref|ZP_16002570.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 80179]
 gi|421559344|ref|ZP_16005218.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 92045]
 gi|433472929|ref|ZP_20430295.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 97021]
 gi|433481415|ref|ZP_20438682.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 2006087]
 gi|433483470|ref|ZP_20440702.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 2002038]
 gi|433485640|ref|ZP_20442843.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 97014]
 gi|325127684|gb|EGC50597.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis N1568]
 gi|402335843|gb|EJU71106.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 92045]
 gi|402336685|gb|EJU71944.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 80179]
 gi|432211508|gb|ELK67458.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 97021]
 gi|432218172|gb|ELK74035.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 2006087]
 gi|432222029|gb|ELK77829.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 2002038]
 gi|432224129|gb|ELK79902.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 97014]
          Length = 503

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 181/395 (45%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G+ + +
Sbjct: 57  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQSIEK 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL- 341
           ++  FE  P+AS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 117 LYAEFETEPIASASIAQVHKARL---HSGER-----VAVKVLRPNLLPLIEQDLSLMRFG 168

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +  +    + L+  E V +F  ++  ++DL REAA+  +   NF+    +  PK  Y
Sbjct: 169 AAWVERLFSDGRRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFQNSNMLIVPKVFY 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  V+  + +L+        LA  G       +  D F HADMHPG
Sbjct: 229 DYCTSDVLTIEWMDGTPVAD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD R  A  
Sbjct: 288 NILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA 334

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A +  V E    +  P   +      + +L E  RR  V +  
Sbjct: 335 HIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQP 391

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 392 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|304388210|ref|ZP_07370331.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis ATCC
           13091]
 gi|385324684|ref|YP_005879123.1| putative ubiquinone biosynthesis protein UbiB [Neisseria
           meningitidis 8013]
 gi|385339527|ref|YP_005893399.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis G2136]
 gi|385851768|ref|YP_005898283.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis
           M04-240196]
 gi|416184044|ref|ZP_11612950.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis M13399]
 gi|416206702|ref|ZP_11620832.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 961-5945]
 gi|418287762|ref|ZP_12900316.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM233]
 gi|418290020|ref|ZP_12902221.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM220]
 gi|421539710|ref|ZP_15985865.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 93004]
 gi|421541938|ref|ZP_15988050.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM255]
 gi|421564808|ref|ZP_16010598.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM3081]
 gi|433466698|ref|ZP_20424157.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 87255]
 gi|433536213|ref|ZP_20492726.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 77221]
 gi|261393071|emb|CAX50666.1| putative ubiquinone biosynthesis protein UbiB [Neisseria
           meningitidis 8013]
 gi|304337821|gb|EFM03969.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis ATCC
           13091]
 gi|325133926|gb|EGC56582.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis M13399]
 gi|325141780|gb|EGC64229.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 961-5945]
 gi|325197771|gb|ADY93227.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis G2136]
 gi|325206591|gb|ADZ02044.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis
           M04-240196]
 gi|372202341|gb|EHP16166.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM220]
 gi|372203242|gb|EHP16948.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM233]
 gi|402318575|gb|EJU54093.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM255]
 gi|402320502|gb|EJU55989.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 93004]
 gi|402345633|gb|EJU80746.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM3081]
 gi|432204127|gb|ELK60173.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 87255]
 gi|432275330|gb|ELL30404.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 77221]
          Length = 503

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 181/395 (45%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G+ + +
Sbjct: 57  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQSIEK 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL- 341
           ++  FE  P+AS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 117 LYAEFETEPIASASIAQVHKARL---HSGER-----VAVKVLRPNLLPLIEQDLSLMRFG 168

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +  +    + L+  E V +F  ++  ++DL REAA+  +   NF+    +  PK  Y
Sbjct: 169 AAWVERLFSDGRRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFQNSNMLIVPKVFY 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  V+  + +L+        LA  G       +  D F HADMHPG
Sbjct: 229 DYCTSDVLTIEWMDGTPVAD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD R  A  
Sbjct: 288 NILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA 334

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A +  V E    +  P   +      + +L E  RR  V +  
Sbjct: 335 HIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQP 391

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 392 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|23465025|ref|NP_695628.1| hypothetical protein BL0427 [Bifidobacterium longum NCC2705]
 gi|23325629|gb|AAN24264.1| hypothetical protein kinase in ABC1 family [Bifidobacterium longum
           NCC2705]
          Length = 501

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 183/391 (46%), Gaps = 37/391 (9%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  GP F+K GQ  + R ++ P+  C +L++L + A    ++     +   +GR   E+F
Sbjct: 6   EALGPTFVKVGQILSMRSEILPQSFCDELAKLRADADPMPYSTVLDVLAAEYGRPADEVF 65

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
              +  P+ S S+AQVHRA+L+    G+      VA+KV+ PGV E++ +D  I+   AK
Sbjct: 66  AHIDPKPLGSASLAQVHRATLK---TGED-----VAIKVQRPGVRETMAQDVSIMRSIAK 117

Query: 345 ISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            ++ VI   + + L   V++      S+ D   EA +L+ F     R+K +  P     L
Sbjct: 118 AATKVIRTSQIVDLKGVVEELWDTFESETDFLIEARNLAEFKRFAARFKYMDCPTAYTEL 177

Query: 404 VHPAVLVETYEQGECVS---RYVDELQGHERLKSALAHIGTHAL---LKMLLVDNFIHAD 457
               V+V  Y  G  VS   R VD   G++     L  IGT  +      +L D F HAD
Sbjct: 178 CTEHVVVMEYIDGISVSHPGRLVD--AGYD-----LKEIGTKLVDNYATQILDDGFFHAD 230

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGNI++R  Q              ++ +D+GMT  L +  R  L E   AVA++D   
Sbjct: 231 PHPGNIIIRGGQ--------------IVLIDLGMTGRLDQRTRAVLKEMIFAVAKQDSPA 276

Query: 518 AAECTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
            AE  LR +  +  P    A + ++D     +GT +   +  A  +  L +   RH + V
Sbjct: 277 LAEGLLRFAGTEADPEDYPALLADLDVIVKEFGTVDLAELDIAAFLTALTQMAGRHNIEV 336

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
              V TV    + LEG   +  P  N+++ +
Sbjct: 337 PSTVTTVGRALVTLEGLLDEFIPDVNMIEII 367


>gi|424962397|ref|ZP_18376753.1| ABC1 family protein [Enterococcus faecium P1986]
 gi|402940679|gb|EJX59474.1| ABC1 family protein [Enterococcus faecium P1986]
          Length = 583

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 181/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 37  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 96

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 97  LSDIFDDFSKSPFASASMGQAHRAKLK---NGDS-----VVVKIQHPNIAEEIRLDLQLF 148

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 149 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 208

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++     E         +LK  +A +     +K +  
Sbjct: 209 YDAFCSKKVIVMEEMSGKNLNHLMNAENKTETFITGIQNKQLKQEVAKLLVENFMKQVFD 268

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V     Q ++S+K             FR+         P+ I +
Sbjct: 269 DGFFHADPHPGNLLFHVLTKEEQTQASRKTEIVHEKEFGSFAFRASTSTEDPVAPYTINY 328

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 329 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 388

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 389 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 447


>gi|289567229|ref|ZP_06447614.1| ABC1 domain-containing protein [Enterococcus faecium D344SRF]
 gi|294615131|ref|ZP_06695017.1| protein kinase, ABC1 family [Enterococcus faecium E1636]
 gi|289160977|gb|EFD08892.1| ABC1 domain-containing protein [Enterococcus faecium D344SRF]
 gi|291592073|gb|EFF23696.1| protein kinase, ABC1 family [Enterococcus faecium E1636]
          Length = 582

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 181/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 36  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 95

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 96  LSDIFDDFSKSPFASASMGQAHRAKLK---NGDS-----VVVKIQHPNIAEEIRLDLQLF 147

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 148 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 207

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++     E         +LK  +A +     +K +  
Sbjct: 208 YDAFCSKKVIVMEEMSGKNLNHLMNAENKTETFITGIQNKQLKQEVAKLLVENFMKQVFD 267

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V     Q ++S+K             FR+         P+ I +
Sbjct: 268 DGFFHADPHPGNLLFHVLTKEEQTQASRKTEIVHEKEFGSFAFRASTSTEDPVAPYTINY 327

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 328 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 387

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 388 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 446


>gi|261207110|ref|ZP_05921799.1| ABC1 family protein [Enterococcus faecium TC 6]
 gi|431208679|ref|ZP_19500892.1| ubiquinone biosynthesis protein [Enterococcus faecium E1620]
 gi|260078738|gb|EEW66440.1| ABC1 family protein [Enterococcus faecium TC 6]
 gi|430570685|gb|ELB09625.1| ubiquinone biosynthesis protein [Enterococcus faecium E1620]
          Length = 581

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 181/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 35  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 94

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 95  LSDIFDDFSKSPFASASMGQAHRAKLK---NGDS-----VVVKIQHPNIAEEIRLDLQLF 146

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 147 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 206

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++     E         +LK  +A +     +K +  
Sbjct: 207 YDAFCSKKVIVMEEMSGKNLNHLMNAENKTETFITGIQNKQLKQEVAKLLVENFMKQVFD 266

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V     Q ++S+K             FR+         P+ I +
Sbjct: 267 DGFFHADPHPGNLLFHVLTKEEQTQASRKTEIVHEKEFGSFAFRASTSTEDPVAPYTINY 326

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 327 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 386

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 387 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 445


>gi|148544179|ref|YP_001271549.1| 2-octaprenylphenol hydroxylase [Lactobacillus reuteri DSM 20016]
 gi|184153551|ref|YP_001841892.1| hypothetical protein LAR_0896 [Lactobacillus reuteri JCM 1112]
 gi|227364608|ref|ZP_03848668.1| ubiquinone biosynthesis protein UbiB [Lactobacillus reuteri MM2-3]
 gi|325682277|ref|ZP_08161794.1| ABC1 family protein kinase [Lactobacillus reuteri MM4-1A]
 gi|148531213|gb|ABQ83212.1| 2-octaprenylphenol hydroxylase [Lactobacillus reuteri DSM 20016]
 gi|183224895|dbj|BAG25412.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
 gi|227070352|gb|EEI08715.1| ubiquinone biosynthesis protein UbiB [Lactobacillus reuteri MM2-3]
 gi|324978116|gb|EGC15066.1| ABC1 family protein kinase [Lactobacillus reuteri MM4-1A]
          Length = 578

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 190/420 (45%), Gaps = 40/420 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           + + L+  GP FIK GQ  +TRPDL      K+L  L  +    SFA  ++T E   G++
Sbjct: 39  ICQALQELGPTFIKLGQILSTRPDLVSPAYIKELRHLQDQVKADSFATVEQTFEEETGKK 98

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           ++E F  F E P AS SI QVH A+L+   P        V VKV+HP VG+ +  D  ++
Sbjct: 99  INEEFASFAEKPFASASIGQVHHATLKDGTP--------VVVKVQHPEVGKLVNTDLALL 150

Query: 340 NLAAKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             A  +   +P  +  + LD+ + + +  ++S+V+   EA +   F         +  PK
Sbjct: 151 RKAVVLFKYVPQDIAVVDLDKVIDELSTSLLSEVNTLEEAKNGEEFYTLNNGDGPILVPK 210

Query: 399 PVYPLVHPAVLVETYEQGECVSRY-----VDELQGHERLKSALAHIGTHALLKMLLVDNF 453
                  P +LV    +G+ + RY      D  Q    +   +A    +  LK + VD++
Sbjct: 211 VYMKYCAPKILVNEAMEGKSI-RYRFKQPNDNDQEAMTVNHEIATTLVNNFLKQVFVDHY 269

Query: 454 IHADMHPGNILVRVAQKKSSQKRLFRSKPH---------------------VIFLDVGMT 492
            HAD HPGNIL+   +   S K+   +K H                     +I+LD GM 
Sbjct: 270 FHADPHPGNILIHELRPDESAKQYATTKHHEKTIYNTTISYDQQEALPNYRIIYLDFGMM 329

Query: 493 AELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA--FWGT 550
             LS     ++      +  +D R   +  L +  +    +  AF +E+  AF   ++ T
Sbjct: 330 GRLSPAMANSIANIVITINTKDTRKIGKAVLNVCNRTGEVDENAFYKELG-AFIQPYFST 388

Query: 551 PEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTL 610
             G+ +   + + Q+++  +++ + + G V  ++     LE    KLDP  ++++  Q+ 
Sbjct: 389 GLGN-IDFVKMLYQIVQLCKKNHLQMRGEVTMLIKAFGTLESSVAKLDPEISMLEVAQSF 447


>gi|239622632|ref|ZP_04665663.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|296453404|ref|YP_003660547.1| ATP-binding domain-containing protein [Bifidobacterium longum
           subsp. longum JDM301]
 gi|317482731|ref|ZP_07941744.1| ABC1 family protein [Bifidobacterium sp. 12_1_47BFAA]
 gi|322690398|ref|YP_004219968.1| hypothetical protein BLLJ_0206 [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|384202269|ref|YP_005588016.1| hypothetical protein BLNIAS_02516 [Bifidobacterium longum subsp.
           longum KACC 91563]
 gi|419848463|ref|ZP_14371561.1| ABC1 family protein [Bifidobacterium longum subsp. longum 1-6B]
 gi|419854638|ref|ZP_14377423.1| ABC1 family protein [Bifidobacterium longum subsp. longum 44B]
 gi|239514629|gb|EEQ54496.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|296182835|gb|ADG99716.1| ABC-1 domain protein [Bifidobacterium longum subsp. longum JDM301]
 gi|316915854|gb|EFV37263.1| ABC1 family protein [Bifidobacterium sp. 12_1_47BFAA]
 gi|320455254|dbj|BAJ65876.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|338755276|gb|AEI98265.1| hypothetical protein BLNIAS_02516 [Bifidobacterium longum subsp.
           longum KACC 91563]
 gi|386407638|gb|EIJ22605.1| ABC1 family protein [Bifidobacterium longum subsp. longum 1-6B]
 gi|386417550|gb|EIJ32028.1| ABC1 family protein [Bifidobacterium longum subsp. longum 44B]
          Length = 606

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 183/391 (46%), Gaps = 37/391 (9%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  GP F+K GQ  + R ++ P+  C +L++L + A    ++     +   +GR   E+F
Sbjct: 111 EALGPTFVKVGQILSMRSEILPQSFCDELAKLRADADPMPYSTVLDVLAAEYGRPADEVF 170

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
              +  P+ S S+AQVHRA+L+    G+      VA+KV+ PGV E++ +D  I+   AK
Sbjct: 171 AHIDPKPLGSASLAQVHRATLK---TGED-----VAIKVQRPGVRETMAQDVSIMRSIAK 222

Query: 345 ISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            ++ VI   + + L   V++      S+ D   EA +L+ F     R+K +  P     L
Sbjct: 223 AATKVIRTSQIVDLKGVVEELWDTFESETDFLIEARNLAEFKRFAARFKYMDCPTAYTEL 282

Query: 404 VHPAVLVETYEQGECVS---RYVDELQGHERLKSALAHIGTHAL---LKMLLVDNFIHAD 457
               V+V  Y  G  VS   R VD   G++     L  IGT  +      +L D F HAD
Sbjct: 283 CTEHVVVMEYIDGISVSHPGRLVD--AGYD-----LKEIGTKLVDNYATQILDDGFFHAD 335

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGNI++R  Q              ++ +D+GMT  L +  R  L E   AVA++D   
Sbjct: 336 PHPGNIIIRGGQ--------------IVLIDLGMTGRLDQRTRAVLKEMIFAVAKQDSPA 381

Query: 518 AAECTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
            AE  LR +  +  P    A + ++D     +GT +   +  A  +  L +   RH + V
Sbjct: 382 LAEGLLRFAGTEADPEDYPALLADLDVIVKEFGTVDLAELDIAAFLTALTQMAGRHNIEV 441

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
              V TV    + LEG   +  P  N+++ +
Sbjct: 442 PSTVTTVGRALVTLEGLLDEFIPDVNMIEII 472


>gi|374333980|ref|YP_005090667.1| putative ubiquinone biosynthesis protein UbiB [Oceanimonas sp. GK1]
 gi|372983667|gb|AEX99916.1| putative ubiquinone biosynthesis protein UbiB [Oceanimonas sp. GK1]
          Length = 545

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 185/402 (46%), Gaps = 30/402 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP FIK+GQ  +TR DL P D+ ++L+ L  + P       ++ IER+  + +  +
Sbjct: 62  LESLGPVFIKFGQMLSTRRDLLPPDIAEELALLQDRVPPFDGRLARQQIERSLRQPIETL 121

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           FD F+E P+AS SIAQVH A L+    GQ      + +KV  PG+   I  D  ++ ++A
Sbjct: 122 FDDFDERPLASASIAQVHTARLK---TGQD-----IVIKVIRPGIERVIEADVSLMHSMA 173

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
             I+ ++P     LR  E V+++   ++ +++L REAA+  +   NF   + +  P+   
Sbjct: 174 TLIARLVPERSSRLRPVEVVEEYRKTLLDELNLLREAANAIQLRRNFEGSRTLYVPEIHS 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
              H  VLV     G  VS  +D L+ +      LA  G       +  D+F HADMHPG
Sbjct: 234 SYCHENVLVMERIYGIPVSD-IDALEANGTNMKLLAERGVEVFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V     +          P  I +D G+   L++ D+  L E F A   RD R  AE 
Sbjct: 293 NIFVSYDHPED---------PQWIGIDCGIVGTLNRDDKRYLAENFLAFFNRDYRKVAE- 342

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTP--EGDL--VHPAECMQQLLEKVRRHRVNVD 577
              L  +         +EE + A      P  E  L  +     +  L    RR  + V 
Sbjct: 343 ---LHVESGWVPADTKVEEFESAIRTVLEPIFEKPLSEISFGHVLLNLFNTARRFNMAVQ 399

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
             +  +  T L +EG  R+L P  ++  T +  L   DW + 
Sbjct: 400 PQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFL--EDWMQK 439


>gi|296314932|ref|ZP_06864873.1| 2-polyprenylphenol 6-hydroxylase [Neisseria polysaccharea ATCC
           43768]
 gi|296838122|gb|EFH22060.1| 2-polyprenylphenol 6-hydroxylase [Neisseria polysaccharea ATCC
           43768]
          Length = 503

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 180/395 (45%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G+ + +
Sbjct: 57  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQPIEK 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL- 341
           ++  FE  PVAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 117 LYAEFETEPVASASIAQVHKARL---HSGER-----VAVKVLRPNLLPLIEQDLSLMRFG 168

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +  +    + L+  E V +F  ++  ++DL REAA+  +   NF+    +  PK  Y
Sbjct: 169 AAWVERLFSDGRRLKPREVVAEFDKYLHDELDLMREAANAGQLGRNFQNSNMLIVPKVFY 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  VS  + +L+        LA  G       +  D F HADMHPG
Sbjct: 229 DYCTSDVLTIEWMDGTPVSD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD    A  
Sbjct: 288 NILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYHRVATA 334

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A +  V E    +  P   +      + +L E  RR  V +  
Sbjct: 335 HIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQP 391

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 392 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|437999763|ref|YP_007183496.1| ubiquinone biosynthesis protein [Candidatus Kinetoplastibacterium
           blastocrithidii (ex Strigomonas culicis)]
 gi|429338997|gb|AFZ83419.1| ubiquinone biosynthesis protein [Candidatus Kinetoplastibacterium
           blastocrithidii (ex Strigomonas culicis)]
          Length = 476

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 196/404 (48%), Gaps = 31/404 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  + R DL P D+  +L+ L+ K    S       IE +FG+ +  +
Sbjct: 20  LEKLGPLFVKLGQSLSGRNDLLPDDITLELAVLYDKVSPFSSNEVISCIENSFGKPIDIL 79

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F E P A+ S+AQVH A++   + G++     VAVKV  PG+ E I RD  ++   +
Sbjct: 80  FLSFNEIPAAAASVAQVHFATI---HDGRE-----VAVKVLRPGILELIDRDLALLRFLS 131

Query: 344 KISSVI-PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF----RRWKDVSFPK 398
           KI +        L+L E + +F  ++  ++DL  EAA+ S+   NF    +R + +  P 
Sbjct: 132 KIINFFWSDSNRLKLKEVIDEFDKYLHKEIDLKCEAANCSQIRSNFNSDPQRKEMLIVPN 191

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
            ++ L + +VL      G  +++ +D L+      S LA+ G H  L  +  D F HADM
Sbjct: 192 IIWDLTNSSVLTMERMYGIPINQ-IDNLRNVGLNTSDLAYRGIHIFLLQVFEDGFFHADM 250

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI +      S  +  F S    I LD G+   LS +D+  L +   A   +D ++ 
Sbjct: 251 HPGNIYI------SYDRNTFGS---YIALDFGIVGCLSDSDKNYLAQNLVAFFHKDYKSV 301

Query: 519 AECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
           A+  +    +S+     + ++ I  V E   ++G P  +L    + + +L +  R   + 
Sbjct: 302 AKLHIESGWVSRDTIVEDLESSIRTVCE--PYFGKPLSEL-SIGKLLLKLFQVSRSFNME 358

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           V   +  +  T L +E    +LDP  N+ +T +  L K  W +S
Sbjct: 359 VQSQLVLLQKTLLNVESLGIQLDPTLNLWETAKPYLEK--WLRS 400


>gi|238028616|ref|YP_002912847.1| ubiquinone biosynthesis protein UbiB [Burkholderia glumae BGR1]
 gi|237877810|gb|ACR30143.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia glumae
           BGR1]
          Length = 525

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 183/397 (46%), Gaps = 29/397 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP F+K+GQ  +TR DL P D   +L++L  + P    A     +E++ G  +S 
Sbjct: 55  ALESLGPIFVKFGQVLSTRRDLLPVDFAIELAKLQDQVPPFDSAVAMSIVEKSLGAPISA 114

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKV---KPIVVAVKVRHPGVGESIRRDFVII 339
            FD F+  PVAS SIAQVH A L+     Q V   KP  VAVKV  P +   I  D  ++
Sbjct: 115 FFDEFDPVPVASASIAQVHFAKLK-----QGVHAGKP--VAVKVLRPNMLPVIDSDMALL 167

Query: 340 -NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
            ++A     + P  + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+
Sbjct: 168 RDIAIWAERLWPDGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDILLVPE 227

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +     +VLV     G  +S+ +D L+        LA  G       +  D F HADM
Sbjct: 228 MFWDFSSQSVLVMERMSGVPISQ-IDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADM 286

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI V +  +   +          I LD G+   LS  D+  L + F A  +RD    
Sbjct: 287 HPGNIQVSLDPQHFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRV 337

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRV 574
           A  TL L      PN +  +EE++ A      P  D     +   + + +L    RR  V
Sbjct: 338 A--TLHLESGWVPPNTR--VEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNV 393

Query: 575 NVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +   +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 394 EIQPQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|293556888|ref|ZP_06675449.1| protein kinase, ABC1 family [Enterococcus faecium E1039]
 gi|291600972|gb|EFF31263.1| protein kinase, ABC1 family [Enterococcus faecium E1039]
          Length = 581

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 181/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 35  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 94

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 95  LSDIFDDFSKSPFASASMGQAHRAKLK---NGDS-----VVVKIQHPNIAEEIRLDLQLF 146

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 147 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 206

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++     E         +LK  +A +     +K +  
Sbjct: 207 YDAFCSKKVIVMEEMSGKNLNHLMNAENKTETFITGIQNKQLKQEVAKLLVENFMKQVFD 266

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRS--------KPHVI-F 486
           D F HAD HPGN+L  V     Q ++S+K             FR+         P+ I +
Sbjct: 267 DGFFHADPHPGNLLFHVLTKEEQTQASRKTETVHEKEFGSFAFRAATSTEDPVAPYTINY 326

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 327 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 386

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 387 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 445


>gi|218767682|ref|YP_002342194.1| ubiquinone biosynthesis protein UbiB [Neisseria meningitidis Z2491]
 gi|433480691|ref|ZP_20437970.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 63041]
 gi|433512943|ref|ZP_20469738.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 63049]
 gi|433515210|ref|ZP_20471983.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 2004090]
 gi|433519763|ref|ZP_20476483.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 65014]
 gi|433521373|ref|ZP_20478071.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 61103]
 gi|433527494|ref|ZP_20484106.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM3652]
 gi|433530145|ref|ZP_20486737.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM3642]
 gi|433531876|ref|ZP_20488443.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 2007056]
 gi|433535085|ref|ZP_20491620.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 2001212]
 gi|433540410|ref|ZP_20496865.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 63006]
 gi|14548306|sp|Q9JVQ5.1|UBIB_NEIMA RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|121051690|emb|CAM07993.1| putative ubiquinone biosynthesis protein [Neisseria meningitidis
           Z2491]
 gi|432213414|gb|ELK69332.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 63041]
 gi|432249087|gb|ELL04507.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 63049]
 gi|432254485|gb|ELL09819.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 65014]
 gi|432255006|gb|ELL10339.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 2004090]
 gi|432261458|gb|ELL16707.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 61103]
 gi|432266394|gb|ELL21577.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM3652]
 gi|432267776|gb|ELL22950.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis NM3642]
 gi|432268521|gb|ELL23688.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 2007056]
 gi|432270279|gb|ELL25419.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 2001212]
 gi|432277425|gb|ELL32471.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis 63006]
          Length = 503

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 180/395 (45%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G+ + +
Sbjct: 57  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQSIEK 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL- 341
           ++  FE  P+AS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 117 LYAEFETEPIASASIAQVHKARL---HSGER-----VAVKVLRPNLLPLIEQDLSLMRFG 168

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +  +    + L+  E V +F  ++  ++DL REAA+  +   NF     +  PK  Y
Sbjct: 169 AAWVERLFSDGRRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFHNSNMLIVPKVFY 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  V+  + +L+        LA  G       +  D F HADMHPG
Sbjct: 229 DYCTSDVLTIEWMDGTPVAD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD R  A  
Sbjct: 288 NILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA 334

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A +  V E    +  P   +      + +L E  RR  V +  
Sbjct: 335 HIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQP 391

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 392 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|319945210|ref|ZP_08019472.1| 2-polyprenylphenol 6-hydroxylase [Lautropia mirabilis ATCC 51599]
 gi|319741780|gb|EFV94205.1| 2-polyprenylphenol 6-hydroxylase [Lautropia mirabilis ATCC 51599]
          Length = 526

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 182/392 (46%), Gaps = 27/392 (6%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E+ GP F+K+GQ  +TR DL P D+  +L+ L  + P          IER    RL + F
Sbjct: 68  ESLGPIFVKFGQVLSTRRDLLPPDIANELALLQDRVPPFPADQAVAEIERGLEMRLEQAF 127

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
             F   P+AS SIAQVHRA L   + G +     VAVKV  PG+ + I  D  ++   A 
Sbjct: 128 AEFGREPIASASIAQVHRARL---HDGTQ-----VAVKVLRPGMLDVIEDDLSLLRTGAT 179

Query: 345 ISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
           ++  + A  + LR  E V +F  ++  ++DL REAA+ ++   NF     +  P+  +  
Sbjct: 180 LAMRLSADARRLRPMEVVDEFDHYLHDELDLVREAANANQLKRNFEGSTLLRIPQMYWDY 239

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
               VLV  + +G  + + +D ++        L+  G       +  D F HADMHPGNI
Sbjct: 240 CRRNVLVMEWVEGIPIGQ-LDRMRAAGIDLEKLSRDGVEIFFTQVFRDGFFHADMHPGNI 298

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
           LV       ++          I LD G+   LS  D+  L + F A  +RD R  AE  L
Sbjct: 299 LVGNGPDDFNR---------YIALDFGIVGTLSDHDKRYLAQNFLAFFKRDYRRVAE--L 347

Query: 524 RLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDGN 579
            +      PN +A  EE++ A      P  D     +     + +L +  RR  V +   
Sbjct: 348 HIESGWVPPNTRA--EELEGAVRACCEPVFDRPLREISLGIVLMRLFQASRRFNVEIQPQ 405

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L+P  ++  T Q +L
Sbjct: 406 LVLLQKTLLNIEGLGRELNPDLDLWVTAQPIL 437


>gi|395760784|ref|ZP_10441453.1| 2-octaprenylphenol hydroxylase [Janthinobacterium lividum PAMC
           25724]
          Length = 523

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 188/397 (47%), Gaps = 29/397 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+ ++L+ L  + P          I ++ G    +
Sbjct: 57  ALEELGPIFVKFGQVLSTRRDLMPPDIAEELARLQDRVPPFDSDLAIAQIVKSLGAHPEQ 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  FE  PVAS SIAQVH A+L+    G++     VAVKV  PG+ + I  D  ++++A
Sbjct: 117 LFASFEREPVASASIAQVHFATLK---DGRE-----VAVKVLRPGMKKLIDEDVALMHIA 168

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +S + A  K L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 169 ADWTSRLWADSKRLKPREVVGEFDKYLHDELDLMREAANASQLRRNFANSNLLLVPEMHW 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                +V+V     G  VS+ +D L         L+  G       +  D F HADMHPG
Sbjct: 229 DYCSSSVIVMERMVGIPVSQ-IDRLVEAGVDLRKLSSDGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV +A +         S    I LD G+   L+  D+  L + F A  RRD +  AE 
Sbjct: 288 NILVSIAPE---------SFGRYIALDFGIVGTLNDYDKDYLSQNFLAFFRRDYKRVAEA 338

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
            +    +         ++E++ A        +  P  D+    + + +L +  RR  V V
Sbjct: 339 HI----ESGWAPKDTRVDELEAAVRACCEPIFDRPLKDISF-GQVLLRLFQTSRRFNVEV 393

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
              +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 394 QPQLVLLQKTLLNIEGLGRQLDPELDLWQTAKPYLEK 430


>gi|241759511|ref|ZP_04757615.1| 2-polyprenylphenol 6-hydroxylase [Neisseria flavescens SK114]
 gi|241320293|gb|EER56626.1| 2-polyprenylphenol 6-hydroxylase [Neisseria flavescens SK114]
          Length = 503

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 177/394 (44%), Gaps = 29/394 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP FIK+GQ  +TRPDL P D   +L+ L  K P      ++  IE++ G+ +  +
Sbjct: 58  LESLGPIFIKFGQVLSTRPDLIPHDYAVELARLQDKVPPFDAQLSRSQIEKSLGQSIDTL 117

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           +  FE  PVAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   A
Sbjct: 118 YAEFETEPVASASIAQVHKARL---HSGEQ-----VAVKVLRPNLLPVIEQDLSLMRFGA 169

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF+    +  PK  Y 
Sbjct: 170 GWVERLFSDGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNFQNSDMLIVPKVFYD 229

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VL   +  G  VS  + +L+        LA  G       +  D F HADMHPGN
Sbjct: 230 YCTRDVLTIEWMDGTPVSD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGN 288

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           ILV    +              I LD G+   L+  D+  L   F A   RD    A   
Sbjct: 289 ILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYHRVATAH 335

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +         +A +  V E    +  P   +      + +L E  RR  V +   
Sbjct: 336 IESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQPQ 392

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +  +  T L +EG  R+LDP  ++  T +  L++
Sbjct: 393 LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVR 426


>gi|307152044|ref|YP_003887428.1| ABC-1 domain-containing protein [Cyanothece sp. PCC 7822]
 gi|306982272|gb|ADN14153.1| ABC-1 domain protein [Cyanothece sp. PCC 7822]
          Length = 562

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 176/396 (44%), Gaps = 33/396 (8%)

Query: 213 RELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTI 272
           R  WL   +R L   GP FIK GQ  +TR DL P +  ++L++L  + PE S       I
Sbjct: 57  RAKWL---VRQLLNLGPTFIKIGQSLSTRADLLPIEYVQELAQLQDRVPEFSSDLAISVI 113

Query: 273 ERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESI 332
           E   G+ +S++F+ FE  P+AS S+ QVHRA L   Y G++     V VKV+ PG+    
Sbjct: 114 ETELGKSISDLFETFEFYPLASASLGQVHRAKL---YTGEE-----VVVKVQRPGLETLF 165

Query: 333 RRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWK 392
             DF +++   +I++  P V+   L+   Q+F   +  ++D   E  +  RF  NF+ + 
Sbjct: 166 NLDFEVVHQVLRIANWFPQVRKFNLEAVYQEFFQLLFQEIDYILEGKNAERFRENFQDYP 225

Query: 393 DVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDN 452
            +  P   +      VL   Y  G  V    + LQ        +  +G  + LK LL+D 
Sbjct: 226 RIKAPIVYWEYTTKRVLTLEYLPGIKVDDR-ETLQAQGVNLDEVIKLGICSYLKQLLLDG 284

Query: 453 FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR 512
           F  +D HPGN+ V +                +IF D G  AE+    +  ++  F AV R
Sbjct: 285 FFQSDPHPGNMAVNL-------------DGELIFYDFGTMAEVKPVAKEQMIRTFFAVLR 331

Query: 513 RDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKV--- 569
           +D     E  + +        P + +  V     F      D        +Q+ E+V   
Sbjct: 332 KDTDQVVETLVYMG----LIEPISDLSSVRRIVRFLLENFRDKPVDIRAFEQVSEEVYMM 387

Query: 570 -RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
            ++    +   +  ++ +   L+G  R LDP YN++
Sbjct: 388 FKQQPFRLPAQMTFIIKSLTTLDGIARALDPQYNLL 423


>gi|312133435|ref|YP_004000774.1| aarf [Bifidobacterium longum subsp. longum BBMN68]
 gi|311772665|gb|ADQ02153.1| AarF [Bifidobacterium longum subsp. longum BBMN68]
          Length = 606

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 183/391 (46%), Gaps = 37/391 (9%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  GP F+K GQ  + R ++ P+  C +L++L + A    ++     +   +GR   E+F
Sbjct: 111 EALGPTFVKVGQILSMRSEILPQSFCDELAKLRADADPMPYSTVLDVLAAEYGRPADEVF 170

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
              +  P+ S S+AQVHRA+L+    G+      VA+KV+ PGV E++ +D  I+   AK
Sbjct: 171 AHIDPKPLGSASLAQVHRATLK---TGED-----VAIKVQRPGVRETMAQDVSIMRSIAK 222

Query: 345 ISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            ++ VI   + + L   V++      S+ D   EA +L+ F     R+K +  P     L
Sbjct: 223 AATKVIRTSQIVDLKGVVEELWDTFESETDFLIEARNLAEFKRFAARFKYMDCPTAYTEL 282

Query: 404 VHPAVLVETYEQGECVS---RYVDELQGHERLKSALAHIGTHAL---LKMLLVDNFIHAD 457
               V+V  Y  G  VS   R VD   G++     L  IGT  +      +L D F HAD
Sbjct: 283 CTEHVVVMEYIDGISVSHPGRLVD--AGYD-----LKEIGTKLVDNYATQILDDGFFHAD 335

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGNI++R  Q              ++ +D+GMT  L +  R  L E   AVA++D   
Sbjct: 336 PHPGNIIIRGGQ--------------IVLIDLGMTGRLDQRTRAVLKEMIFAVAKQDSPA 381

Query: 518 AAECTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
            AE  LR +  +  P    A + ++D     +GT +   +  A  +  L +   RH + V
Sbjct: 382 LAEGLLRFAGTEADPEDYPALLADLDVIVKEFGTVDLVELDIAAFLTALTQMAGRHNIEV 441

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
              V TV    + LEG   +  P  N+++ +
Sbjct: 442 PSTVTTVGRALVTLEGLLDEFIPDVNMIEII 472


>gi|380025774|ref|XP_003696643.1| PREDICTED: uncharacterized aarF domain-containing protein kinase
           2-like [Apis florea]
          Length = 256

 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 130/229 (56%), Gaps = 15/229 (6%)

Query: 309 YPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISS-VIPAVKWLRLDESVQQFAVF 367
           Y  +K++P  VAVKV HPG+ + +RRD  I+    K ++ ++P ++WL L + + +F+  
Sbjct: 2   YINRKLQP--VAVKVLHPGIKKQLRRDLSIMRGICKCATYIMPKLQWLSLIDCIDEFSHI 59

Query: 368 MMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQ 427
           M +QVD+  EA +L +F  NF   K+V FP+P        +LVE++++G  +S Y+D+  
Sbjct: 60  MENQVDMNLEAENLIQFSKNFSNKKEVIFPQPYKNFTQHEILVESFQEGSPISNYLDD-- 117

Query: 428 GHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ----------KRL 477
            + +L+  LA +G   +LKM+  DNFIH D+HPGNILV+   + + +          +  
Sbjct: 118 QNTKLQGKLARMGIKTILKMVFNDNFIHCDLHPGNILVQTNYESTEKISTWFWKFIDRNY 177

Query: 478 FRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS 526
             + P ++ LD G+   L+   R NL + F++V    G  AAE  L  S
Sbjct: 178 LPTYPRLVILDCGLVVSLNDRCRQNLKDVFRSVVMGKGELAAEYILEHS 226


>gi|375012704|ref|YP_004989692.1| putative unusual protein kinase [Owenweeksia hongkongensis DSM
           17368]
 gi|359348628|gb|AEV33047.1| putative unusual protein kinase [Owenweeksia hongkongensis DSM
           17368]
          Length = 551

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 176/389 (45%), Gaps = 28/389 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP ++K GQ  + R D+ P +  K+L  L  +    SFA  +K I+   G    ++
Sbjct: 57  LQELGPTYVKLGQLLSNRRDILPEEWIKELEHLQDEVEPVSFAEVEKVIDEELGSNRKKL 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII---- 339
           F   +   +AS SIAQVHRA L   Y G+K     V +K++ PG+  +I+ DF+II    
Sbjct: 117 FRSIDSEALASASIAQVHRAEL---YSGEK-----VVLKIQRPGIKATIKDDFMIIRDVA 168

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
            L  K    +   +  RL   +  F   +M +++  REA +++RF  NF++   +  P+ 
Sbjct: 169 GLLLKNFKELENYQPFRL---IDSFESAIMEELNFKREAININRFRENFKKDDRIYVPRV 225

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
              +    ++      G  +S   +    H      LA +GT    K +    F HAD H
Sbjct: 226 YQQMCTYKLICMEEVSGTKISDLKELRDKHTEKFDKLAALGTDLYFKQIFEHGFFHADPH 285

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGN+ +                  V FLD G+       ++ +L E    ++R++    +
Sbjct: 286 PGNVFI-------------LDDGRVCFLDFGIMGSFLPEEQDDLAELMIHMSRKNISRVS 332

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
               R++   + PN +AF  ++ E    + T   D    ++ +Q+    +  + + +  N
Sbjct: 333 GVLQRMAISSSIPNERAFERDLYEMLEVFETVSLDDFPLSDRIQRFRNILTDNTIELSRN 392

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
              +M +  VLEG  ++L+P YNV   L+
Sbjct: 393 YYLLMRSMAVLEGVTKQLEPDYNVFGNLR 421


>gi|359786135|ref|ZP_09289274.1| ubiquinone biosynthesis protein [Halomonas sp. GFAJ-1]
 gi|359296504|gb|EHK60753.1| ubiquinone biosynthesis protein [Halomonas sp. GFAJ-1]
          Length = 540

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 177/399 (44%), Gaps = 26/399 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK+GQ  +TR DL P D+  +L  L  + P          +E+A    L+E 
Sbjct: 57  LEALGPIFIKFGQMLSTRRDLLPEDVADELKRLQDQVPPFPGEKAAARVEKALDMSLTEA 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+ AP+AS SIAQVH A+L   + G+      V VK+  PG+   +R+D  ++   A
Sbjct: 117 FAAFDRAPLASASIAQVHAATL---HTGED-----VVVKIIRPGIDRIMRQDMALMYQVA 168

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
           K+ + +P  K LR  E ++ +   +  ++DL +EAA+ S+   NF+    +  P   +P 
Sbjct: 169 KLFAKVPEAKRLRPVEVIRDYEATLFDELDLYKEAANTSQLKRNFKDSPLLFVPTIYWPF 228

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
               V+V+   +G  V+  ++ L+        LA  G       +  DNF HADMHPGNI
Sbjct: 229 TRRHVMVQERIRGVPVAD-LETLRAQGTNLKKLAERGVELFFTQVFRDNFFHADMHPGNI 287

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
            V     +          P  I +D G+   L++ D+  L     A   +D    A   +
Sbjct: 288 FVNCDNPED---------PQYIAIDCGIVGSLTREDQDYLARNLLAFFHQDYYEVAALHI 338

Query: 524 R---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
               + +        A I  V E       P  D+    + +  L +  RR  + V   +
Sbjct: 339 ESGWVGENTRANEFAAAIRTVCEPIL--EKPLKDISF-GQVLLGLFQTARRFNMEVQPQL 395

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
             +  T L +EG  R+L P  ++  T +  L    W K 
Sbjct: 396 VLLQKTLLNIEGLGRQLYPDLDLWSTAKPYL--EQWMKD 432


>gi|409122738|ref|ZP_11222133.1| ABC1 family protein [Gillisia sp. CBA3202]
          Length = 556

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 153/319 (47%), Gaps = 23/319 (7%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           ++  L+  GP +IK GQ  +TRPDL P    + L+ L    P   ++  ++ +E   G +
Sbjct: 55  LVEDLKNMGPTYIKLGQLLSTRPDLLPDPYLQALASLQDDVPPIEYSVVQEIVEEEIGTK 114

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +S+ F  F+E P+AS SI QVH+A+LR   P        VAVK++ PG+ +    D   +
Sbjct: 115 ISKAFSSFDEEPLASASIGQVHKATLRSGKP--------VAVKIQRPGIRKQFLADLDTL 166

Query: 340 NLAAKISSVIPAV-KWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
              A+ +     V K    D  + +    ++ ++D  REA +L     N + +K ++ P+
Sbjct: 167 KEMAEFAVKHTKVAKKYAFDNVLAELRHILLQELDYNREAQNLITLGKNLKEFKSLTVPQ 226

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
           P+       VL   Y QG+ ++  +   +  E     L      A LK ++ D F+HAD 
Sbjct: 227 PILDYSSSKVLTMEYVQGKKITS-ISPTKKLENDLGPLVDELVEAYLKQIITDGFVHADP 285

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI +              ++  +  +D+GM A+ +   +  L++   A+++ DG  A
Sbjct: 286 HPGNIHI-------------TNQNQIALIDLGMVAKFTPNIQEKLLQLLIALSQEDGEAA 332

Query: 519 AECTLRLSKQQNCPNPKAF 537
           A+  L +S+  +    K F
Sbjct: 333 ADVLLNMSELTDQSEVKKF 351


>gi|117926768|ref|YP_867385.1| 2-octaprenylphenol hydroxylase [Magnetococcus marinus MC-1]
 gi|117610524|gb|ABK45979.1| 2-octaprenylphenol hydroxylase [Magnetococcus marinus MC-1]
          Length = 530

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 184/406 (45%), Gaps = 27/406 (6%)

Query: 217 LHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           LH+ LR  LE  GP FIK+GQ  +TR D+ P ++ ++L  L    P    A  +++IE  
Sbjct: 41  LHIRLRLALEELGPTFIKFGQTLSTRLDILPDEIGQELKRLQDDVPPFDLATVRQSIEED 100

Query: 276 FGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD 335
             R L E+F  F+E PVAS SIAQVH A   F + G +     VAVKV  P V   +  D
Sbjct: 101 LKRPLHELFRSFDEKPVASASIAQVHHA---FTHDGDE-----VAVKVLRPDVAARVETD 152

Query: 336 F-VIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV 394
             +++ +A+ +  ++P  + L+    V++FA  + +++D   EA+   +   NF+    +
Sbjct: 153 IAMLMTMASLVEELMPEWRRLKPRGVVKEFAQTIRNEMDFLVEASRAQKLGENFKDDVGM 212

Query: 395 SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFI 454
             P+  +PL    V    + +G  +     E          +A     +  K +  D + 
Sbjct: 213 MIPQVYWPLTSSRVFTMAWIEGVSIDELPRERVAGRPDPRVVAERLLSSFFKQVFHDGYF 272

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           HAD HPGNILV             R    V  +D G+ + +S+  R  L E  +    RD
Sbjct: 273 HADQHPGNILV-------------REDGVVALIDFGIVSHVSEQTRQFLAEMVQGFITRD 319

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEEVDE-AFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
            +  A+  L      +  +  AF E   +     +G P  D +  A  + +L +   ++ 
Sbjct: 320 YKKVAQVHLDAGYIPHDTDMDAFEEACRQIGEPVFGQPLKD-ISVARLLAKLFKTTEQYN 378

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           + V   +  +  T   LEG  R+L P  N  +  + L++   W K+
Sbjct: 379 MEVQPQLLLLQKTLFTLEGVGRELHPDLNAWEIAEPLVMA--WMKA 422


>gi|23335662|ref|ZP_00120896.1| COG0661: Predicted unusual protein kinase [Bifidobacterium longum
           DJO10A]
 gi|189440090|ref|YP_001955171.1| protein kinase [Bifidobacterium longum DJO10A]
 gi|189428525|gb|ACD98673.1| Unusual protein kinase [Bifidobacterium longum DJO10A]
          Length = 606

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 184/391 (47%), Gaps = 37/391 (9%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  GP F+K GQ  + R ++ P+  C +L++L + A    ++     +   +GR   E+F
Sbjct: 111 EALGPTFVKVGQILSMRSEILPQSFCDELAKLRADADPMPYSTVLDVLAAEYGRPADEVF 170

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
              +  P+ S S+AQVHRA+L+    G+      VA+KV+ PGV E++ +D  I+   AK
Sbjct: 171 AHIDSKPLGSASLAQVHRATLK---TGED-----VAIKVQRPGVRETMAQDVSIMRSIAK 222

Query: 345 ISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            ++ VI   + + L   V++      S+ D   EA++L+ F     R+K +  P     L
Sbjct: 223 AATKVIRTSQIVDLKGVVEELWDTFESETDFLIEASNLAEFKRFAARFKYMDCPTVYAEL 282

Query: 404 VHPAVLVETYEQGECVS---RYVDELQGHERLKSALAHIGTHAL---LKMLLVDNFIHAD 457
               V+V  Y  G  VS   + VD   G++     L  IGT  +      +L D F HAD
Sbjct: 283 CTEHVVVMEYIDGISVSHPGQLVD--AGYD-----LKEIGTKLVDNYATQILDDGFFHAD 335

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGNI++R  Q              ++ +D+GMT  L +  R  L E   AVA++D   
Sbjct: 336 PHPGNIIIRGGQ--------------IVLIDLGMTGRLDQRTRAVLKEMIFAVAKQDSPA 381

Query: 518 AAECTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
            AE  LR +  +  P    A + ++D     +GT +   +  A  +  L +   RH + V
Sbjct: 382 LAEGLLRFAGTEADPEDYPALLADLDVIVKEFGTVDLAELDIAAFLTALTQMAGRHNIEV 441

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
              V TV    + LEG   +  P  N+++ +
Sbjct: 442 PSTVTTVGRALVTLEGLLDEFIPDVNMIEII 472


>gi|297617568|ref|YP_003702727.1| ABC transporter [Syntrophothermus lipocalidus DSM 12680]
 gi|297145405|gb|ADI02162.1| ABC-1 domain protein [Syntrophothermus lipocalidus DSM 12680]
          Length = 547

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 177/387 (45%), Gaps = 30/387 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP ++K GQ  +TRPDL P +  ++L +L    P   F   ++ ++   G R  +
Sbjct: 56  VLEQLGPTYVKLGQLLSTRPDLIPAEYIRELEKLQDSVPPFPFKQVQQVLDEE-GLRTED 114

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F E P+AS SI QVH A L+    G+K     V VKV+ PG+G+ I  D  I  L 
Sbjct: 115 VFASFSEEPLASASIGQVHEAILK---TGEK-----VVVKVQRPGIGKIIENDLEI--LY 164

Query: 343 AKISSVIPAVKWLR---LDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             +  +    KW R   L + + +FA  +  ++D A+E  +  +F  NFR+  +V  PK 
Sbjct: 165 ELVGMLEKHTKWGRLYQLTDILDEFANALRKEIDFAQEGRNADKFRENFRQNANVLIPKV 224

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
            +      VLV  Y  G  VS +   ++    LK    HI   AL + +    F HAD H
Sbjct: 225 YWEYTSRRVLVLEYIGGVKVSEFEQLIRAGFDLKRVANHI-VEALFQQIYEHGFFHADPH 283

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGNI +   +K             VIF D G    + +      ++   A+ R D     
Sbjct: 284 PGNIAIAPGEK-------------VIFYDFGQVGTVDEVLIERCMDLVMAMVRYDVNGVT 330

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDE-AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
              L++       N +    +V      ++G P    +H  E + +L++   +++V V  
Sbjct: 331 RALLQVGIATRHVNREELRRDVSRLQQKYYGMPFSQ-IHVGEALGELVQLSFKYQVRVPP 389

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +  ++   + +EG   +LDPG +V++
Sbjct: 390 ELSLMVKMMMTIEGLLSRLDPGLSVVE 416


>gi|295675465|ref|YP_003603989.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia sp. CCGE1002]
 gi|295435308|gb|ADG14478.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia sp. CCGE1002]
          Length = 525

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 181/393 (46%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL P D+  +L++L  + P    A     +E++ G  +  +
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLPVDIANELAKLQDQVPPFDSAVAIALVEKSLGAPVDVL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           FD FE  PVAS SIAQVH A+++    GQ      VAVKV  P +   I  D  ++ ++A
Sbjct: 116 FDDFERVPVASASIAQVHFATVK---AGQHAGK-AVAVKVLRPNMLPVIDSDLALLRDIA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                +    K L+  E V +F  ++  ++DL REAA+ S+   NF+    +  P+  + 
Sbjct: 172 VWAERLWADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFQGLDLLLVPEMYWE 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
              P VLV     G  +S+ VD L+        LA  G       +  D F HADMHPGN
Sbjct: 232 FCTPTVLVMERMVGVPISQ-VDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +      +          I LD G+   LS  D+  L + F A  +RD    A  T
Sbjct: 291 IQVSLDPAHFGR---------YIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVA--T 339

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
           L L      P  +  +EE++ A      P  D     +   + + +L    RR  V +  
Sbjct: 340 LHLESGWVPPTTR--VEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 398 QLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|293567810|ref|ZP_06679151.1| protein kinase, ABC1 family [Enterococcus faecium E1071]
 gi|291589395|gb|EFF21202.1| protein kinase, ABC1 family [Enterococcus faecium E1071]
          Length = 581

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 182/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 35  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 94

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 95  LSDIFDDFSKSPFASASMGQAHRAKLK---NGDS-----VVVKIQHPNIAEEIRLDLQLF 146

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 147 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 206

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++     E         +LK  +A +     +K +  
Sbjct: 207 HDAFCSKKVIVMEEMSGKNLNHLMNAENKTETFITGIQNKQLKQEVAKLLVENFMKQVFD 266

Query: 451 DNFIHADMHPGNILVRVAQK----KSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V +K    ++S+K             FR+         P+ I +
Sbjct: 267 DGFFHADPHPGNLLFHVLKKEEQTQASRKTEIVHEKEFGSFAFRASTSTEDPVAPYTINY 326

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 327 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 386

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 387 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 445


>gi|288561225|ref|YP_003424711.1| 2-polyprenylphenol 6- hydroxylase UbiB4 [Methanobrevibacter
           ruminantium M1]
 gi|288543935|gb|ADC47819.1| 2-polyprenylphenol 6- hydroxylase UbiB4 [Methanobrevibacter
           ruminantium M1]
          Length = 529

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 175/389 (44%), Gaps = 30/389 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           +E  GPAFIK GQ  ATRPD+   D+   L  L    P   F   +K IE   G+ L E+
Sbjct: 48  MEELGPAFIKLGQLLATRPDMVGNDIADDLKLLRDNTPATPFEEMRKVIEGELGKPLEEV 107

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           +  F E P+ S SI QV+RA+L       K   + VAVKV+ PG+ + I  D  I+ NLA
Sbjct: 108 YSEFNEEPLGSASIGQVYRATL-------KESGMEVAVKVQKPGIYDVIVPDVKILNNLA 160

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +   +   +   L    ++F   +  ++D   E  ++++   NF+  + +  P+ VYP
Sbjct: 161 GTVDKHVSGSRTYNLPAMAKEFERSIFKELDYMEEVRNINKITNNFKDVEYIKIPE-VYP 219

Query: 403 LVHPAVLV--ETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
               + L+  E  +  E    + +E++G     + +A  GT + LK +L+D F HAD HP
Sbjct: 220 EYCSSKLINMELIDGYEVTDLFDNEIEGINN--TEIAQYGTQSYLKQVLIDGFFHADPHP 277

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GN+ V    K             + ++D GM   ++ T R N  +    +   +      
Sbjct: 278 GNLFVTKDAK-------------LCYIDFGMMGVVNDTFRSNFAQLILLLLDGNSHHLIN 324

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAF-AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
             L ++      N   F E+VD+   ++ G    DL         L+  +  H + +   
Sbjct: 325 QLLYMNIISPEQNTDEFREDVDDLLNSYIGV---DLDQMDGIFDNLMNVMINHNIILPRE 381

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
              +    L++E    +LDP +N+   L+
Sbjct: 382 FIMIGRGILLIEDAGNRLDPHFNLTAELE 410


>gi|153206939|ref|ZP_01945757.1| 2-polyprenylphenol 6-hydroxylase [Coxiella burnetii 'MSU Goat
           Q177']
 gi|165918219|ref|ZP_02218305.1| 2-polyprenylphenol 6-hydroxylase [Coxiella burnetii Q321]
 gi|212219527|ref|YP_002306314.1| 2-polyprenylphenol 6-hydroxylase accessory protein [Coxiella
           burnetii CbuK_Q154]
 gi|120577012|gb|EAX33636.1| 2-polyprenylphenol 6-hydroxylase [Coxiella burnetii 'MSU Goat
           Q177']
 gi|165918079|gb|EDR36683.1| 2-polyprenylphenol 6-hydroxylase [Coxiella burnetii Q321]
 gi|212013789|gb|ACJ21169.1| 2-polyprenylphenol 6-hydroxylase accessory protein [Coxiella
           burnetii CbuK_Q154]
          Length = 541

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 150/298 (50%), Gaps = 19/298 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+ ++L +L  + P       K  IE++ G+ + +
Sbjct: 59  VLEELGPIFVKFGQLLSTRRDLLPDDIAEELEKLQDRVPPFPGKIAKAMIEKSCGKTIED 118

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
            F  F+E P+AS SIAQVH A+L   + G +     V +KV  P + ++IRRD  ++ L 
Sbjct: 119 CFATFDETPLASASIAQVHAATL---HDGSE-----VIIKVLRPNIAKTIRRDIALMYLG 170

Query: 343 AKISSVI-PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AK++       K L+  E V +F   +  ++DL REAA+ S+   NF   + +  PK  +
Sbjct: 171 AKLARRFWRHGKRLKPVEVVAEFEHTIYHELDLMREAANASQLRRNFADSEKMYVPKIYW 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
             VH  V+V     G  +S   +    +  LK  LA  G       +L D+F HADMHPG
Sbjct: 231 DYVHRDVMVMERIYGIRISNIAELKAANTNLKK-LAEYGVEIFFTQVLRDSFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           N+ V V   ++         P  + +D G+   LS  D+  + E   A  +RD R  A
Sbjct: 290 NLFVDVTDPEN---------PKYLGVDFGIMGALSPQDQRYIAENLLAFFKRDYRQVA 338


>gi|237747319|ref|ZP_04577799.1| ubiquinone biosynthesis protein [Oxalobacter formigenes HOxBLS]
 gi|229378670|gb|EEO28761.1| ubiquinone biosynthesis protein [Oxalobacter formigenes HOxBLS]
          Length = 520

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 178/397 (44%), Gaps = 31/397 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + LE  GP FIK+GQ  +TR DL P D+  +LS+L  + P        + I +  G    
Sbjct: 55  KALEELGPIFIKFGQMLSTRRDLLPADIADELSKLQDRVPPFDSNLAVEQITKYLGAPPE 114

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           E+F  F+  PVAS S+AQVH A L   + G++     VAVKV  P + + I RD  ++ +
Sbjct: 115 ELFASFDRIPVASASVAQVHFARL---HNGRE-----VAVKVLRPEMQKRIGRDIELMYV 166

Query: 342 AAKISSVI-PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
            A +        K LRL   V +F   +  ++DL REAA+ S+   NF     +  P+  
Sbjct: 167 FAALGERFWRDGKRLRLTAVVHEFDKSLHDELDLMREAANYSQLRRNFADSDKLMVPEIF 226

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +      V+V     G  +SR    L+    LK  LA  G    L  +  D F HADMHP
Sbjct: 227 WDYCSTNVIVMEKMVGIPISRTDRLLEAGLDLKK-LASNGVEIFLTQVFRDAFFHADMHP 285

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNIL+ V      +          I LD+G+   L   D+  L + F A  RRD R  AE
Sbjct: 286 GNILISVEPATFGR---------YIALDLGIVGMLDDFDKEYLSKNFVAFFRRDYRMVAE 336

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP------AECMQQLLEKVRRHRV 574
             +    +     P   + E++ A      P  D   P         + +L +  RR  +
Sbjct: 337 ANI----ESGWAPPDTSVVELEAAVRTCCEPMFD--RPLRDFSFGMVLMRLFQTSRRFNI 390

Query: 575 NVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 391 EIQPQLVLLQKTMLNIEGLGRQLDPDLDLWKTAKPFL 427


>gi|227544580|ref|ZP_03974629.1| ubiquinone biosynthesis protein UbiB [Lactobacillus reuteri
           CF48-3A]
 gi|338204573|ref|YP_004650718.1| ABC transporter [Lactobacillus reuteri SD2112]
 gi|227185459|gb|EEI65530.1| ubiquinone biosynthesis protein UbiB [Lactobacillus reuteri
           CF48-3A]
 gi|336449813|gb|AEI58428.1| ABC1 family protein kinase [Lactobacillus reuteri SD2112]
          Length = 578

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 192/419 (45%), Gaps = 38/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           + + L+  GP FIK GQ  +TRPDL      K+L  L  +    SFA  ++T E   G++
Sbjct: 39  ICQALQELGPTFIKLGQILSTRPDLVSPAYIKELRHLQDQVKADSFATVEQTFEEETGKK 98

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +++ F  F E P AS SI QVH A+L+   P        V VKV+HP VG+ +  D  ++
Sbjct: 99  INDEFASFAEKPFASASIGQVHHATLKDGTP--------VVVKVQHPEVGKLVNTDLALL 150

Query: 340 NLAAKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             A  +   +P  +  + LD+ + + +  ++S+V+   EA +   F         +  PK
Sbjct: 151 RKAVVLFKYVPQDIAVVDLDKVIDELSTSLLSEVNTLEEAKNGEEFYTLNNGDGPILVPK 210

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAH-IGT---HALLKMLLVDNFI 454
                  P +LV    +G+ +     +   +++  + + H I T   +  LK + VD++ 
Sbjct: 211 VYMKYCAPKILVNEAMEGKSIRYRFKQPNDNDQEATTVNHEIATTLVNNFLKQVFVDHYF 270

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPH---------------------VIFLDVGMTA 493
           HAD HPGNIL+   +   S K+   +K H                     +I+LD GM  
Sbjct: 271 HADPHPGNILIHELRPDESAKQYATTKHHEKIIYNTTISYDQQEALPNYRIIYLDFGMMG 330

Query: 494 ELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA--FWGTP 551
            LS     ++      +  +D R   +  L +  +    +  AF +E+  AF   ++ T 
Sbjct: 331 RLSPAMANSIANIVITINTKDTRKIGKAVLNVCNRTGEVDENAFYKELG-AFIQPYFSTG 389

Query: 552 EGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTL 610
            G+ +   + + Q+++  +++ + + G V  ++     LE    KLDP  ++++  Q+ 
Sbjct: 390 LGN-IDFVKMLYQIVQLCKKNHLQMRGEVTMLIKAFGTLESSVAKLDPEISMLEVAQSF 447


>gi|313201754|ref|YP_004040412.1| 2-polyprenylphenol 6-hydroxylase [Methylovorus sp. MP688]
 gi|312441070|gb|ADQ85176.1| 2-polyprenylphenol 6-hydroxylase [Methylovorus sp. MP688]
          Length = 506

 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 183/398 (45%), Gaps = 39/398 (9%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+  +L++L  + P   +      +E A+G  +++
Sbjct: 55  ALEALGPIFVKFGQMLSTRRDLIPLDIADELAKLQDRVPPFPYEQAAAIMEAAYGMPVAQ 114

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F+ F+ AP+AS S+AQVH ASL    PG +     VAVK+  PG+G  I +D  +++ A
Sbjct: 115 VFERFDIAPIASASVAQVHFASL----PGGR----EVAVKILRPGIGTIIEKDLALLDSA 166

Query: 343 A----KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
           A    K+SS     + L+  E V +FA  + S++DL  EAA+ S    NF+  + +  P 
Sbjct: 167 AWLFHKVSS---DGRRLKPREVVAEFARHIHSELDLMLEAANCSLLGRNFKDKRLLLVPD 223

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +      V+V     G  +S+ V  L+        LA  G       +  D F HADM
Sbjct: 224 VYWDWCREQVMVMDRMNGIPISQ-VAHLRSIGVDIPKLARDGVEIFFTQVFRDGFFHADM 282

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI V                   + LD G+   L++ D+  L   F A  RRD R  
Sbjct: 283 HPGNIQV-------------APDGRYVALDFGIMGSLTEIDKQYLARNFLAFFRRDYREV 329

Query: 519 AECTLRLS-KQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHR 573
           A   +      ++ P     +EE + A      P  D     +     + +L +  RR  
Sbjct: 330 ARAHIESGWAPKDTP-----LEEFETAIRAVCEPIFDKPISEISFGRVLLRLFQTSRRFG 384

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V +   +  +  T L +EG  R LDP  ++  T Q  L
Sbjct: 385 VEIQPQLTMLQKTLLNVEGLGRDLDPQLDLWKTAQPYL 422


>gi|410657977|ref|YP_006910348.1| Ubiquinone biosynthesis monooxygenase UbiB [Dehalobacter sp. DCA]
 gi|409020332|gb|AFV02363.1| Ubiquinone biosynthesis monooxygenase UbiB [Dehalobacter sp. DCA]
          Length = 559

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 177/412 (42%), Gaps = 29/412 (7%)

Query: 201 MAPFADSFGPQFRELWLHV------VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLS 254
           + PF+  F P+       +      + + +E  GP FIK GQ A+TRPD+ P  +  +L 
Sbjct: 36  LVPFSSRFMPKLETGTGDLKSVGQRIRKVIEELGPTFIKMGQIASTRPDVVPTGIIAELE 95

Query: 255 ELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKV 314
           +L    P   F   ++ I+   G ++ +IF  FEE P+A+ SI QVHRA L        +
Sbjct: 96  KLQDNVPSFPFNEVREIIQEELGIQIEKIFINFEEIPLAAASIGQVHRAVL--------I 147

Query: 315 KPIVVAVKVRHPGVGESIRRDF-VIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVD 373
               VAVKV+ P V   I  D  +++++A      +   +  ++ E + +FA  + +++D
Sbjct: 148 SGETVAVKVQRPHVSTIIETDLEILMDIAGLAEQRLDWAERYQIAEIIDEFAKSLRAELD 207

Query: 374 LAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLK 433
              EA +  +    F     +  PK         VL   Y QG  +SR  + L   E   
Sbjct: 208 YTIEAKNAEKMTRQFSNNAKIRIPKIYEDYSAKKVLTMEYIQGTKLSR-TERLIELEYDT 266

Query: 434 SALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTA 493
           S +A     A+L+ +L+D F H D HPGNILV   Q              + FLD GM  
Sbjct: 267 SEIAKQIVEAILQQILIDGFFHGDPHPGNILVLTDQV-------------ITFLDFGMVG 313

Query: 494 ELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEG 553
            L+   + +       + R++        L +    +  N      +VD     +     
Sbjct: 314 RLTPQMKYHFASLVIGMVRKNTDEIIRVILNMGIAPSDINISRLHSDVDALKDKYLDIAL 373

Query: 554 DLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
             V   + + +L      HR+ +  ++  +  + L LEG   KL P  +VMD
Sbjct: 374 SQVSLGQAVNELFTVAFNHRIRIPSDLTLLGKSLLTLEGSVEKLAPELSVMD 425


>gi|237749469|ref|ZP_04579949.1| 2-polyprenylphenol 6-hydroxylase [Oxalobacter formigenes OXCC13]
 gi|229380831|gb|EEO30922.1| 2-polyprenylphenol 6-hydroxylase [Oxalobacter formigenes OXCC13]
          Length = 520

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 180/401 (44%), Gaps = 33/401 (8%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP FIK+GQ  +TR DL P D+  +LS+L  + P        + I R  G    E
Sbjct: 56  ALENLGPIFIKFGQMLSTRRDLLPGDIADELSKLQDRVPPFDSNVAVEQITRYLGAPPEE 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  PVAS S+AQVH A L   + G +     VAVKV  P + + I RD  ++ + 
Sbjct: 116 LFASFDRIPVASASVAQVHFAKL---HNGHE-----VAVKVLRPEMQKRIGRDIELMYVF 167

Query: 343 AKISSVI-PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A +        K LRL   V +F   +  ++DL REAA+ S+   NF   + +  P+  +
Sbjct: 168 AALGEKFWKDGKRLRLSAVVHEFDKSLHDELDLMREAANYSQLRRNFADSETLVVPEIFW 227

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 V+V     G  +S+ +D L+        LA+ G    L  +  D F HADMHPG
Sbjct: 228 DYCSTNVIVMERMYGIPISQ-IDRLKEAGFDLKKLANDGVEIFLTQVFRDAFFHADMHPG 286

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NIL+        +          + LD+G+   L   D+  L + F A  RRD +  AE 
Sbjct: 287 NILISTEPSTYGK---------YVALDLGIVGMLDDFDKEYLSKNFLAFFRRDYKMVAEA 337

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAE------CMQQLLEKVRRHRVN 575
            +    +     P   + E++ A      P  D   P +       + +L +  RR  + 
Sbjct: 338 NI----ESGWAPPGTSVVELEAAVRVCCEPMID--RPLKDFSFGLVLMRLFQTSRRFNIE 391

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADW 616
           V   +  +  T L +EG  R+LDP  ++  T +  L   DW
Sbjct: 392 VQPQLVLLQKTMLNIEGLGRQLDPDLDLWKTAKPFL--EDW 430


>gi|297539277|ref|YP_003675046.1| 2-polyprenylphenol 6-hydroxylase [Methylotenera versatilis 301]
 gi|297258624|gb|ADI30469.1| 2-polyprenylphenol 6-hydroxylase [Methylotenera versatilis 301]
          Length = 514

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 174/392 (44%), Gaps = 30/392 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+  +L++L  + P  +F   +  I  AF   L+++
Sbjct: 56  LEALGPIFVKFGQMLSTRRDLIPLDIADELAKLQDQVPPVAFTEIQSVIHEAFNLPLNQV 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  FEE  +AS S+AQVH A L    P        VAVKV  PG+ + I  D  +++ AA
Sbjct: 116 FSSFEETAIASASVAQVHFAYLLDGTP--------VAVKVLRPGIAKVINHDLELLDTAA 167

Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
            +   I A VK L+  E V +FA    S++DL  EAA+ +R   NF   K +  P   + 
Sbjct: 168 WLLQGISAEVKRLKPREVVAEFAEHTHSELDLTLEAANCTRLSSNFPD-KRLLVPHVYWD 226

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                V+V     G  +S+ VD L+        LAH G       +  D F HADMHPGN
Sbjct: 227 WCRQQVMVMERMVGTPISK-VDVLRAKGIDIPKLAHDGVEIFFTQVFRDGFFHADMHPGN 285

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V                   I LD G+   L+  D+  L   F A    D R  A   
Sbjct: 286 IQV-------------ADDGRYIALDFGIMGTLTDNDKYYLARNFLAFFNGDYRDVAVAH 332

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    + K  N    +  +  + E    +  P  D+      +  L +  R+  V +   
Sbjct: 333 IESGWVPKDTNVEALETAVRAICE--PIFDKPLKDISF-GRTLLSLFQMSRKFGVIIQPQ 389

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 390 LVMLQKTLLNIEGLGRDLDPDIDLWQTAKPFL 421


>gi|313668955|ref|YP_004049239.1| ubiquinone biosynthesis protein [Neisseria lactamica 020-06]
 gi|313006417|emb|CBN87880.1| putative ubiquinone biosynthesis protein [Neisseria lactamica
           020-06]
          Length = 503

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 180/395 (45%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      ++  IE++ G+ + +
Sbjct: 57  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSRSQIEKSLGQPIEK 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL- 341
           ++  FE  PVAS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 117 LYAEFETEPVASASIAQVHKARL---HSGER-----VAVKVLRPNLLPLIEQDLSLMRFG 168

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +  +    + L+  E V +F  ++  ++DL REAA+  +   NF+    +  PK  Y
Sbjct: 169 AACVERLFSDGRRLKPREVVAEFDKYLHDELDLMREAANAGQLGRNFQNSNMLIVPKVFY 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  V+  + +L+        LA  G       +  D F HADMHPG
Sbjct: 229 DYCTSDVLTIEWMDGTPVAD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD +  A  
Sbjct: 288 NILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYQRVATA 334

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A +  V E    +  P   +      + +L E  RR  V +  
Sbjct: 335 HIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRRFNVEIQP 391

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 392 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|387886150|ref|YP_006316449.1| 2-octaprenylphenol hydroxylase [Francisella noatunensis subsp.
           orientalis str. Toba 04]
 gi|386870966|gb|AFJ42973.1| 2-octaprenylphenol hydroxylase [Francisella noatunensis subsp.
           orientalis str. Toba 04]
          Length = 551

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 196/429 (45%), Gaps = 39/429 (9%)

Query: 199 IMMAPFADSFGPQFRELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELH 257
           +++ PF   + P+ R+L   V +R  LE  GP FIK+GQ  + R DL P D+ K++S+L 
Sbjct: 37  LLINPFY--YSPRIRKLEHGVRIREALEKLGPIFIKFGQALSVRADLLPPDVIKEVSKLQ 94

Query: 258 SKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPI 317
              P        + IE+A  + + EIF  FE AP+AS S+AQVH A L+     +K    
Sbjct: 95  DNVPPFDNNIASQQIEKAAKKPIDEIFKSFESAPLASASVAQVHGAVLQ---NDEK---- 147

Query: 318 VVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLARE 377
            V VKV  PG+ + ++ D  ++   A + S +  +K  +  E V++       ++DL RE
Sbjct: 148 -VVVKVLRPGIEKILKLDTSLMLFFATLLSKLKEIKRFKPIEIVKEINQSFFDELDLVRE 206

Query: 378 AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS--RYVDELQGHERLKSA 435
           A++ S+   NF        PK  +      V+V     G  VS    +D L    RL   
Sbjct: 207 ASNASQIRRNFEGSTIHYVPKIYWEYTSSTVMVMERVSGVKVSDIETLDALGVDRRL--- 263

Query: 436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL 495
           LA  G       +  + F HADMHPGN+ + V            + P  I +D G+   L
Sbjct: 264 LAQRGVEIFYSQVFDNCFFHADMHPGNMFIDVTNP---------ADPKYISIDFGIVGTL 314

Query: 496 SKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL 555
           ++ D+  L   F A  +RD R  AE  +     ++   P    E+V E+ A     E   
Sbjct: 315 NRDDQRYLAGNFLAFFKRDYRKVAELHI-----ESGWVPSDTREDVLES-AIRTVCEPIF 368

Query: 556 VHPAE------CMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQT 609
             P +       + QL    RR  +N+   +  +  T   +EG  +KL P  N+ +T + 
Sbjct: 369 EKPMKEISLGYTLMQLFAVARRFNMNIQPQLTLLQKTLFHVEGLGQKLCPELNIWETSRP 428

Query: 610 LLLKADWAK 618
           +L K  W K
Sbjct: 429 ILEK--WMK 435


>gi|298370236|ref|ZP_06981552.1| 2-polyprenylphenol 6-hydroxylase [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298281696|gb|EFI23185.1| 2-polyprenylphenol 6-hydroxylase [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 503

 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 187/408 (45%), Gaps = 30/408 (7%)

Query: 211 QFRELWLHVVLRT-LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           Q+ ++ L V LRT LE+ GP F+K+GQ  +TRPDL P +   +L++L  + P      ++
Sbjct: 44  QYADIPLPVRLRTALESLGPIFVKFGQVLSTRPDLIPHNYALELAKLQDQVPPFDAQLSR 103

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329
             IE++ G+ +  ++  FE  PVAS SIAQVH+A L   + G++     VAVKV  P + 
Sbjct: 104 AQIEKSLGQSVETLYAEFETEPVASASIAQVHKARL---HSGEQ-----VAVKVLRPNLL 155

Query: 330 ESIRRDFVIINL-AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
             I +D  ++   AA +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF
Sbjct: 156 PVIEQDLSLMRFGAAWVERLFADGKRLKPREVVAEFDKYLHDELDLMREAANASQLGRNF 215

Query: 389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML 448
           +    +  PK  Y      VL   +  G  VS  + +L+        LA  G       +
Sbjct: 216 QNSDMLIVPKVFYDYCTRDVLTIEWMDGTPVSD-IAKLKADGIDLHKLADYGVEIFFTQV 274

Query: 449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFK 508
             D F HADMHPGNILV    +              I LD G+   L+  D+  L   F 
Sbjct: 275 FRDGFFHADMHPGNILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFL 321

Query: 509 AVARRDGRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQL 565
           A   RD    A   +    +         +A +  V E    +  P   +      M +L
Sbjct: 322 AFFNRDYHRVATAHIESGWVPADTRAEELEAAVRTVCE--PIFNKPISQISFGLVLM-RL 378

Query: 566 LEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            E  RR  V +   +  +  T L +EG  R+LDP  ++  T +  L +
Sbjct: 379 FEVSRRFHVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWATAKPFLTR 426


>gi|430823393|ref|ZP_19441964.1| ubiquinone biosynthesis protein [Enterococcus faecium E0120]
 gi|430866425|ref|ZP_19481702.1| ubiquinone biosynthesis protein [Enterococcus faecium E1574]
 gi|431744087|ref|ZP_19532959.1| ubiquinone biosynthesis protein [Enterococcus faecium E2071]
 gi|430442106|gb|ELA52154.1| ubiquinone biosynthesis protein [Enterococcus faecium E0120]
 gi|430551653|gb|ELA91404.1| ubiquinone biosynthesis protein [Enterococcus faecium E1574]
 gi|430605715|gb|ELB43097.1| ubiquinone biosynthesis protein [Enterococcus faecium E2071]
          Length = 581

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 181/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTI+      
Sbjct: 35  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIQTELSLS 94

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           LS+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 95  LSDIFDDFSKSPFASASMGQAHRAKLK---NGDS-----VVVKIQHPNIAEEIRLDLQLF 146

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    +++++D  +E+ +  +F      WK++  PK 
Sbjct: 147 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMDFLKESQNGEQFYQKNNGWKEIRSPKI 206

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHE---------RLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++     E         +LK  +A +     +K +  
Sbjct: 207 YDAFCSKKVIVMEEMSGKNLNHLMNAENKTETFITGIQNKQLKQEVAKLLVENFMKQVFD 266

Query: 451 DNFIHADMHPGNILVRV----AQKKSSQKR-----------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V     Q ++S+K             FR+         P+ I +
Sbjct: 267 DGFFHADPHPGNLLFHVLTKEEQTQASRKTETVHEKEFGSFAFRASTSTEDPVAPYTINY 326

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 327 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGSFDESRFHQELTSFLE 386

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E    ++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 387 QYYDSPIDEINLQEVFTHVVTICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 445


>gi|381152405|ref|ZP_09864274.1| 2-polyprenylphenol 6-hydroxylase [Methylomicrobium album BG8]
 gi|380884377|gb|EIC30254.1| 2-polyprenylphenol 6-hydroxylase [Methylomicrobium album BG8]
          Length = 516

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 183/400 (45%), Gaps = 33/400 (8%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           + +TLE  GP ++K+GQ  +TR DL P D+  +L +L  + P       ++ IE+  G  
Sbjct: 58  IRKTLEDLGPIYVKFGQALSTRKDLLPEDIADELVKLQDRVPPFPNEVARRIIEQELGMP 117

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           + E F  F+ +P+AS S+AQVH A L   + G+      V VKV  P + + I  D  ++
Sbjct: 118 IGEAFAEFDPSPLASASVAQVHTAKL---HSGE-----AVVVKVLRPDIEDRIHSDIALL 169

Query: 340 NLAAKISSVI-PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
              A+ +       + LR  E V +F    + ++DL REAA+ ++   NF   + +  P+
Sbjct: 170 YELARFAERFWSDARRLRPLEVVAEFEKTTLDELDLIREAANAAKLRRNFENSEIIYVPE 229

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +PL    V+V    QG  V   +++L+        LA  G       +  DNF HADM
Sbjct: 230 VHWPLSRQKVMVMERIQGIPVGE-IEQLKAGGADFKLLAERGVEIFFTQVFRDNFFHADM 288

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI V +  K              I +D G+   LS +D+  L E F A   RD R  
Sbjct: 289 HPGNIFVNLPAK-------------YIAVDFGIVGSLSLSDQHYLAENFLAFFNRDYRKV 335

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHR 573
           A    ++  +         IEE + A        +  P  D+    + + +L +  RR  
Sbjct: 336 A----KMHVESGWVPSTTRIEEFESAIRGVCEPIFEKPLRDISF-GQLLLRLFQTARRFD 390

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           ++V   +  +  T L +EG  R+L P  ++  T +  L K
Sbjct: 391 MHVQPQLVLLQKTLLNIEGLGRQLYPELDLWQTAKPFLEK 430


>gi|120436312|ref|YP_861998.1| ABC1 family protein [Gramella forsetii KT0803]
 gi|117578462|emb|CAL66931.1| ABC1 family protein [Gramella forsetii KT0803]
          Length = 556

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 152/325 (46%), Gaps = 23/325 (7%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           ++  L+  GP +IK GQ  +TRPDL P +  K L+ L        F   K+ IE+  G +
Sbjct: 55  LVEDLKQMGPTYIKLGQLLSTRPDLLPDNYLKALANLQDNVSPVPFGEIKEIIEKELGTK 114

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +S  F+ F+E P+AS SI QVHRA L    P        VAVKV+ PG+ +    D   +
Sbjct: 115 ISRAFNSFDETPLASASIGQVHRAELHSGRP--------VAVKVQRPGIAKQFMEDLDTL 166

Query: 340 N-LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
           + L A   + +   K   +DE   +    +++++D  +EA +L     N ++++ +  P 
Sbjct: 167 DELTALAVNHLETAKTYAIDEVFAELRRILINELDYNKEAQNLKTLKRNLQQFEHLIIPA 226

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
           PV       VL   +  G+ ++  +  L+  E   S L      A L+ ++ D F HAD 
Sbjct: 227 PVDDYSSTRVLTMEFVSGKKITS-LSPLRQMENDFSELVEELVEAYLQQIINDGFAHADP 285

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI              F     +  +D+GM A  S   + NL+E   A+++ +G   
Sbjct: 286 HPGNI-------------KFTDDNKIALIDLGMVARFSPKLQENLIELLLAISQSNGEKT 332

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDE 543
           A   L++S+       K F + V +
Sbjct: 333 AHSLLKMSELTEESQKKQFSKTVSD 357


>gi|126664758|ref|ZP_01735742.1| 2-polyprenylphenol 6-hydroxylase [Marinobacter sp. ELB17]
 gi|126631084|gb|EBA01698.1| 2-polyprenylphenol 6-hydroxylase [Marinobacter sp. ELB17]
          Length = 547

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 174/393 (44%), Gaps = 27/393 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+   L  L  K P       ++ IERA G  ++E+
Sbjct: 59  LEELGPVFVKFGQILSTRRDLLPDDMADSLKNLQDKVPPFPSDSAREIIERALGAPVTEL 118

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL-A 342
           F  F   P+AS S+AQVH A+L+    GQK     V VKV  PG+ ++IR+D  ++ L A
Sbjct: 119 FAEFSADPMASASVAQVHAATLK---NGQK-----VVVKVLRPGIEKTIRQDLSLMYLMA 170

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +       K L   E V  +   +  ++DL REAA+ S+   NF     +  P   + 
Sbjct: 171 GMLEKYWVEGKRLHPLEVVADYDSTIHDELDLQREAANASQLRRNFDNSPLIYIPFIDWD 230

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VLV     G  ++  V  L         LA  G       +  D+F HADMHPGN
Sbjct: 231 FTRKQVLVMERIHGVPIAD-VATLNAAGVNMKVLAEKGVEIFFTQVFRDSFFHADMHPGN 289

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V ++           + P  I +D G+   LS  D+  L     A  RRD R  A+  
Sbjct: 290 IFVDISNP---------ADPQYIAIDFGIVGTLSPDDQSYLARNLLAFFRRDYRQVAQ-- 338

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTP--EGDL--VHPAECMQQLLEKVRRHRVNVDG 578
             L  Q     P+  + E + A      P  E  L  +     + +L +  RR  + V  
Sbjct: 339 --LHIQSGWVPPETRVNEFEAAIRTVCEPIFERPLKEISFGHFLLRLFQTARRFNMEVQP 396

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 397 QLVLLQKTLLNVEGLGRQLYPDLDLWSTAQPYL 429


>gi|399546501|ref|YP_006559809.1| ubiquinone biosynthesis protein UbiB [Marinobacter sp. BSs20148]
 gi|399161833|gb|AFP32396.1| putative ubiquinone biosynthesis protein UbiB [Marinobacter sp.
           BSs20148]
          Length = 547

 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 122/393 (31%), Positives = 175/393 (44%), Gaps = 27/393 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+   L  L  K P       ++ IERA G  ++E+
Sbjct: 59  LEELGPVFVKFGQILSTRRDLLPDDMADSLKTLQDKVPPFPSDSAREIIERALGAPVTEL 118

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F   P+AS S+AQVH A+L+    GQK     V VKV  PG+ ++IR+D  ++ L A
Sbjct: 119 FAEFSADPMASASVAQVHAATLK---NGQK-----VVVKVLRPGIEKTIRQDLSLMYLMA 170

Query: 344 KISSVIPAV-KWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
            +     A  K L   E V  +   +  ++DL REAA+ S+   NF     +  P   + 
Sbjct: 171 GLLEKYWAEGKRLHPLEVVADYDSTIHDELDLQREAANASQLRRNFDNSPLIYIPFIDWE 230

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VLV     G  ++  V  L         LA  G       +  D+F HADMHPGN
Sbjct: 231 FTRKQVLVMERIHGVPIAD-VATLNAAGVNMKVLAEKGVEIFFTQVFRDSFFHADMHPGN 289

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V ++           + P  I +D G+   LS  D+  L     A  RRD R  A+  
Sbjct: 290 IFVDISNP---------ADPQYIAIDFGIVGTLSPDDQSYLARNLLAFFRRDYRQVAQ-- 338

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTP--EGDL--VHPAECMQQLLEKVRRHRVNVDG 578
             L  Q     P+  + E + A      P  E  L  +     + +L +  RR  + V  
Sbjct: 339 --LHIQSGWVPPETRVNEFEAAIRTVCEPIFERPLKEISFGHFLLRLFQTARRFNMEVQP 396

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 397 QLVLLQKTLLNVEGLGRQLYPDLDLWSTAQPYL 429


>gi|91775049|ref|YP_544805.1| ubiquinone biosynthesis protein UbiB [Methylobacillus flagellatus
           KT]
 gi|91709036|gb|ABE48964.1| 2-octaprenylphenol hydroxylase [Methylobacillus flagellatus KT]
          Length = 514

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 182/389 (46%), Gaps = 33/389 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL P DL  +L++L  + P   +   +  +++A+G+ + E+
Sbjct: 56  LESLGPIFVKFGQMLSTRRDLIPLDLADELAKLQDRVPAFGYDDVETILKQAYGKPVLEV 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  P+AS S+AQVH A L    P        VAVK+  PG+ + I +D  +++ AA
Sbjct: 116 FQSFDVEPIASASVAQVHFAQLPDGRP--------VAVKILRPGISKVIEKDLKLLDSAA 167

Query: 344 KISSVIPAV-KWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
            +   + +  K L+  E V +FA  + S++DL  EAA+ S    NF   + +  P   + 
Sbjct: 168 WLLQTLSSDGKRLKPREVVAEFARHIHSELDLMLEAANCSLLGRNFADKRLLLVPDVYWD 227

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
             H  V+V     G  VS+ VD L+        LA  G       +  D F HADMHPGN
Sbjct: 228 WCHEQVMVMERMNGTPVSQ-VDHLREIGVDIPKLARDGVEIFFTQVFRDGFFHADMHPGN 286

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
             V+VA                + LD G+   L+  D+  L   F A  RRD R  A   
Sbjct: 287 --VQVADDG-----------RYVALDFGIMGTLNDEDKQYLARNFLAFFRRDYREVARAH 333

Query: 523 LRLSKQQNCPNPKAF-IEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVD 577
           +     ++   PK   I+E + A      P  D     +   + + +L +  RR  V + 
Sbjct: 334 I-----ESGWAPKDTPIDEFETAIRAVCEPIFDKPLKEISFGKVLLRLFQTSRRFGVEIQ 388

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
             +  +  T L +EG  R LDP  ++  T
Sbjct: 389 PQLAMLQKTLLNVEGLGRDLDPNLDLWKT 417


>gi|423332625|ref|ZP_17310407.1| conserved hypothetical protein [Lactobacillus reuteri ATCC 53608]
 gi|337727743|emb|CCC02829.1| conserved hypothetical protein [Lactobacillus reuteri ATCC 53608]
          Length = 577

 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 192/419 (45%), Gaps = 38/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           + + L+  GP FIK GQ  +TRPDL      K+L  L  +    SFA  ++T E   G++
Sbjct: 38  ICQALQELGPTFIKLGQILSTRPDLVSPAYIKELRHLQDQVKADSFATVEQTFEEETGKK 97

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +++ F  F E P AS SI QVH A+L+   P        V VKV+HP VG+ +  D  ++
Sbjct: 98  INDEFASFAEKPFASASIGQVHHATLKDGTP--------VVVKVQHPEVGKLVSTDLALL 149

Query: 340 NLAAKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             A  +   +P  +  + LD+ + + +  ++S+V+   EA +   F         +  PK
Sbjct: 150 RKAVVLFKYVPQDIAVVDLDKVIDELSTSLLSEVNTLEEAKNGEEFYTLNNGDGPILVPK 209

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAH-IGT---HALLKMLLVDNFI 454
                  P +LV    +G+ +     +   +++  + + H I T   +  LK + +D++ 
Sbjct: 210 VYMKYCAPKILVNEAMEGKSIRYRFKQSNDNDQEATTVNHEIATTLVNNFLKQVFIDHYF 269

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPH---------------------VIFLDVGMTA 493
           HAD HPGNIL+   +   S K+   +K H                     +I+LD GM  
Sbjct: 270 HADPHPGNILIHELRPDESAKQYATTKYHEKTIYNTTISYDQQEALPNYRIIYLDFGMMG 329

Query: 494 ELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA--FWGTP 551
            LS     ++      +  +D R   +  L +  +    +  AF +E+  AF   ++ T 
Sbjct: 330 RLSPAMANSIANIVITINTKDTRKIGKAVLNVCNRTGEVDENAFYKELG-AFIQPYFSTG 388

Query: 552 EGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTL 610
            G+ +   + + Q+++  +++ + + G V  ++     LE    KLDP  ++++  Q+ 
Sbjct: 389 LGN-IDFVKMLYQIVQLCKKNHLQMRGEVTMLIKAFGTLESSVAKLDPEISMLEVAQSF 446


>gi|209521828|ref|ZP_03270506.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia sp. H160]
 gi|209497732|gb|EDZ97909.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia sp. H160]
          Length = 525

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 181/394 (45%), Gaps = 23/394 (5%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP F+K+GQ  +TR DL P D+  +L++L  + P    A     +E++ G  +  
Sbjct: 55  ALESLGPIFVKFGQVLSTRRDLLPVDIANELAKLQDQVPPFDSAVAIALVEKSLGAPVDV 114

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +FD FE  PVAS SIAQVH A+++    GQ      VAVKV  P +   I  D  ++ ++
Sbjct: 115 LFDDFERVPVASASIAQVHFATVK---AGQHAGK-AVAVKVLRPNMLPVIDSDLALLRDI 170

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A     +    K L+  E V +F  ++  ++DL REAA+ S+   NF+    +  P+  +
Sbjct: 171 AVWAERLWADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFQGLDLLLVPEMYW 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  +S+ VD L+        LA  G       +  D F HADMHPG
Sbjct: 231 EFCTPTVLVMERMVGVPISQ-VDTLRVAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V +      +          I LD G+   LS  D+  L + F A  +RD    A  
Sbjct: 290 NIQVSLDPAHFGR---------YIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVA-- 338

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVD 577
           TL L      P  +  +EE++ A      P  D     +   + + +L    RR  V + 
Sbjct: 339 TLHLESGWVPPTTR--VEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQ 396

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 397 PQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|54298905|ref|YP_125274.1| hypothetical protein lpp2972 [Legionella pneumophila str. Paris]
 gi|53752690|emb|CAH14125.1| hypothetical protein lpp2972 [Legionella pneumophila str. Paris]
          Length = 549

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 182/396 (45%), Gaps = 25/396 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           ++LE  GP FIK+GQ  +TRPD+ P D+ K+LS+L  K P          IE+A+ +   
Sbjct: 60  KSLEELGPIFIKFGQALSTRPDILPEDIAKELSKLQDKVPPFPSHIAMNIIEQAYKQSAY 119

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
           ++F  F+   +AS S+AQVH A+L+    G+      V VK+  P +   I +D  I+  
Sbjct: 120 DVFAQFDPIALASASMAQVHAATLK---TGEN-----VVVKILRPNMRRLIEQDLSIMYT 171

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           +AA      P  K  +  E V++F   ++ ++DL REAA+ ++   NF +   +  P+  
Sbjct: 172 IAALTDRYWPEGKRFKPKEIVKEFEHTLLDELDLMREAANAAQLRRNFNQSPMLYIPEIY 231

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +   H  +LV     G  V+  V  L+ H      LA  G       +  D F HADMHP
Sbjct: 232 WDYCHHNILVIERIHGIPVTDIV-SLRDHGIDIKKLAERGVEIFFTQVFRDCFFHADMHP 290

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V     K          P  I +D G+   L+  D+  L E   A   RD +  AE
Sbjct: 291 GNIFVSYQNPKD---------PQYICVDFGIIGTLTDNDKRYLAENLVAFFNRDYKRVAE 341

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             +    +S+       ++ I  V E    +  P  D+    + + +L +  RR  + V 
Sbjct: 342 LHVESGWVSRDTPVAEFESSIRTVCE--PIFEKPLKDISF-GQVVFRLFQVARRFHMEVQ 398

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +  +  T L +EG  R+L P  ++  T +  L K
Sbjct: 399 PQLILLQKTLLAIEGLGRQLYPELDLWATAKPFLEK 434


>gi|229816777|ref|ZP_04447059.1| hypothetical protein BIFANG_02024 [Bifidobacterium angulatum DSM
           20098 = JCM 7096]
 gi|229785793|gb|EEP21907.1| hypothetical protein BIFANG_02024 [Bifidobacterium angulatum DSM
           20098 = JCM 7096]
          Length = 574

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 179/385 (46%), Gaps = 31/385 (8%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  GP F+K GQ  + R ++ P+  C +LS+L + A    +     T+   +GR + EIF
Sbjct: 80  EALGPTFVKVGQILSMRSEMLPQSFCDELSKLRADADPMPYQVVIDTLAEEYGRPIEEIF 139

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
              +  P+ S S+AQVHRA+L     G+      VAVKV+ PGV E++ +D  I+   AK
Sbjct: 140 SHIDSKPLGSASLAQVHRATL---VTGED-----VAVKVQRPGVSETMAQDVSIMRSLAK 191

Query: 345 ISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
           +++ + P  + +     V++      ++ D   EA +L+ F    + +K +  P P   L
Sbjct: 192 VAAKLFPDAQIVDFKGVVEELWDTFEAETDSLVEARNLAAFKRFSKPYKYMDCPAPYPEL 251

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL---LKMLLVDNFIHADMHP 460
               V+V  Y  G  VS     L     LK     IGT  +      +L + F HAD HP
Sbjct: 252 CTEHVVVMDYIDGISVSHPKQLLAAGYDLK----EIGTKLVDNYATQILDEGFFHADPHP 307

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI+VR  Q              ++ +D+GMT  L +  R  L +   AVA++D    A+
Sbjct: 308 GNIIVRGGQ--------------IVLIDLGMTGRLDQRTRTVLKDMLFAVAQQDSPALAD 353

Query: 521 CTLRLSKQQ-NCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
             LR +    +  +  A ++++D     +G  +   +  A  +  L +   RH + +  +
Sbjct: 354 SLLRFANTSPDAEDYPALLDDLDMVVQEYGKVDLAELDIAAFLASLTQLAARHGIEIPSS 413

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVM 604
           + TV    + LEG   +  P  N++
Sbjct: 414 ITTVGRALITLEGLLDEFIPNVNMI 438


>gi|23098764|ref|NP_692230.1| ABC transporter [Oceanobacillus iheyensis HTE831]
 gi|22776991|dbj|BAC13265.1| ABC transporter [Oceanobacillus iheyensis HTE831]
          Length = 551

 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 177/383 (46%), Gaps = 25/383 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK GQ A+TR DL P+D+ ++L +L  +    SF+  K+ I++     +  +
Sbjct: 56  LEELGPTFIKLGQIASTRQDLIPKDIIEELEKLQDQVAPFSFSDVKEIIDKELQEPIDVV 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           F+ F+E P+A+ SI QVH   LR    GQ+     VAVK++ P + E +  D  +++N+A
Sbjct: 116 FESFDEDPIAAASIGQVHYGVLR---TGQE-----VAVKIQRPNLEEKVHTDLEILMNIA 167

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
               S +   K  +L   +++F+  + +++D   E  +  R    F++  DV  P   + 
Sbjct: 168 KLAESRLDWAKKYQLCAIIKEFSNSLTAELDYTLEGRNAHRIAQQFKKHDDVVVPNVYWD 227

Query: 403 LVHPAVLVETYEQGECVSRYVDEL-QGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
           L    VL   Y +G  +      + +G+      +A        + +L+D F HAD HPG
Sbjct: 228 LTTEKVLTMEYIKGIKLDENTKLVREGYN--PKLIAEKLIQKQFQQILIDGFFHADPHPG 285

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           N++V    K             ++F+D GM   L+ T + +L     A+ R++ ++  + 
Sbjct: 286 NVMVLPNHK-------------ILFMDFGMVGRLTATMKDHLSSLIVAIMRQNTKSIIKA 332

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVC 581
             R+       +      ++D+    +       V   E +  L      H + +  ++ 
Sbjct: 333 IYRMGIVSEGVDADYMYADIDDLRDKYYDIPFSQVSIGEAINDLFRVATTHGIRIPTDLS 392

Query: 582 TVMVTTLVLEGWQRKLDPGYNVM 604
            V  + L LEG   +LDP  +++
Sbjct: 393 LVGKSLLTLEGTVERLDPDISIV 415


>gi|344173659|emb|CCA88829.1| 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway
           [Ralstonia syzygii R24]
          Length = 525

 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 181/395 (45%), Gaps = 25/395 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P          +E++ G+ LS 
Sbjct: 56  ALEQLGPIFVKFGQVLSTRRDLLPPDVADELARLQDRVPPFDSKVAAAIVEKSLGKPLSA 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +F  F+  PVAS SIAQVH A+LR    G       VAVKV  PG+   I  D  ++ ++
Sbjct: 116 LFHRFDHHPVASASIAQVHFATLR----GGPDDGREVAVKVLRPGMLPVIDSDLALMRDV 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 172 AMWMEKLWADGKRLKPREVVAEFDKYLHDELDLMREAANASQLRRNFADSDLLLVPEVFW 231

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 V V     G  +S +  EL+        LA  G       +  D F HADMHPG
Sbjct: 232 DWCTSEVFVMERMHGVRIS-HAAELREAGVDMHKLARDGVEIFFTQVFRDGFFHADMHPG 290

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV VA +         S    I LD G+   LS+ D+  L + F A  +RD    A  
Sbjct: 291 NILVSVAPE---------SLGRYIALDFGIVGALSEFDKNYLAQNFLAFFQRDYHRVA-- 339

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
              L  +      +  +EE++ A       ++  P G  +     + +L +  RR  V V
Sbjct: 340 --LLHVESGWAPEETRVEELEGAIRACCEPYFDRPLGQ-ISLGLVLMRLFQTSRRFNVEV 396

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 397 QPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAKPFL 431


>gi|397668581|ref|YP_006510118.1| 2-octaprenylphenol hydroxylase [Legionella pneumophila subsp.
           pneumophila]
 gi|395131992|emb|CCD10285.1| 2-octaprenylphenol hydroxylase [Legionella pneumophila subsp.
           pneumophila]
          Length = 549

 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 182/396 (45%), Gaps = 25/396 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           ++LE  GP FIK+GQ  +TRPD+ P D+ K+LS+L  K P          IE+A+ +   
Sbjct: 60  KSLEELGPIFIKFGQALSTRPDILPEDIAKELSKLQDKVPPFPSHIAMNIIEQAYKQSAY 119

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
           ++F  F+   +AS S+AQVH A+L+    G+      V VK+  P +   I +D  I+  
Sbjct: 120 DVFAQFDPIALASASMAQVHAATLK---TGEN-----VVVKILRPNMRRLIEQDLSIMYT 171

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           +AA      P  K  +  E V++F   ++ ++DL REAA+ ++   NF +   +  P+  
Sbjct: 172 IAALADRYWPEGKRFKPKEIVKEFEHTLLDELDLMREAANAAQLRRNFNQSPMLYIPEIY 231

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +   H  +LV     G  V+  V  L+ H      LA  G       +  D F HADMHP
Sbjct: 232 WDYCHHNILVIERIHGIPVTDIV-SLRDHGIDIKKLAERGVEIFFTQVFRDCFFHADMHP 290

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V     K          P  I +D G+   L+  D+  L E   A   RD +  AE
Sbjct: 291 GNIFVSYQNPKD---------PQYICVDFGIIGTLTDNDKRYLAENLVAFFNRDYKRVAE 341

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             +    +S+       ++ I  V E    +  P  D+    + + +L +  RR  + V 
Sbjct: 342 LHVESGWVSRDTPVAEFESSIRTVCE--PIFEKPLKDISF-GQVVFRLFQVARRFHMEVQ 398

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +  +  T L +EG  R+L P  ++  T +  L K
Sbjct: 399 PQLILLQKTLLAIEGLGRQLYPELDLWATAKPFLEK 434


>gi|427725066|ref|YP_007072343.1| ABC-1 domain-containing protein [Leptolyngbya sp. PCC 7376]
 gi|427356786|gb|AFY39509.1| ABC-1 domain-containing protein [Leptolyngbya sp. PCC 7376]
          Length = 542

 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 182/392 (46%), Gaps = 35/392 (8%)

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGF 287
           GP ++K GQ  +TRPDL P    + L++L +K P   +   ++TI +  G+ LSE+F   
Sbjct: 55  GPFYVKLGQLLSTRPDLLPPKYIETLTDLQAKVPTVPWFEIEQTISQELGKPLSEVFQEI 114

Query: 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISS 347
              PVA+GSIAQ+HRA LR            VA+KV+ PG+ + + +D V+I   A++++
Sbjct: 115 NPNPVAAGSIAQIHRAVLR--------NGKAVALKVQRPGIDQIVSQDTVLITGIAELAA 166

Query: 348 VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF--RRWKD---VSFPKPVYP 402
           +    +   +    + F   + +++D   EA +  +   N    RW D   ++ P+  + 
Sbjct: 167 LTEIGQDYDVVALAKDFTKAVNAELDFRTEAGYTDQLRRNLSKSRWFDQQQLAIPEINWD 226

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHALLKMLLVDNFIHADMH 459
           L    +LV  +  G+ +      L+G    ++ + A+  I   A  + + VD F HAD H
Sbjct: 227 LTTRKLLVMEWLDGKPL------LEGDVPSKKQRQAITTILFRAFFQQIFVDGFFHADPH 280

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGNI              +     V  +D GM   L    +  L E   A+   D ++ A
Sbjct: 281 PGNI-------------FYLDNGRVALIDCGMVGRLDPRTQKLLTEMLLAIVDIDAQSCA 327

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           + TL LS+     N        D+    +       ++ +E   ++L+  R ++V + GN
Sbjct: 328 QLTLELSEDSTNVNLARLEANYDKLLRKYYDRSLTQLNFSEVFYEILQVARNNKVKLPGN 387

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +     +   LEG  R  +P  N++D ++ L+
Sbjct: 388 LGLYAKSLANLEGVARNFNPEVNLLDEIKPLI 419


>gi|387824001|ref|YP_005823472.1| Ubiquinone biosynthesis monooxygenase UbiB [Francisella cf.
           novicida 3523]
 gi|328675600|gb|AEB28275.1| Ubiquinone biosynthesis monooxygenase UbiB [Francisella cf.
           novicida 3523]
          Length = 515

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 191/426 (44%), Gaps = 33/426 (7%)

Query: 200 MMAPFADSFGPQFRELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHS 258
           M+ PF   + P+   L   V +R  LE  GP FIK+GQ  + R DL P D+ K++S+L  
Sbjct: 1   MLNPFY--YSPRVHRLEHGVRIREALEKLGPIFIKFGQALSVRADLLPPDVIKEVSKLQD 58

Query: 259 KAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIV 318
             P        + IE+A  + +SEIF  FE  P+AS S+AQVH A L+     +K     
Sbjct: 59  NVPPFDNQVAAQQIEKAVKKSISEIFKSFENTPLASASVAQVHAAVLQ---NDEK----- 110

Query: 319 VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREA 378
           V VKV  PG+ + ++ D  ++   A + S +  ++  +  E V++       ++DL REA
Sbjct: 111 VVVKVLRPGIEKILKLDTSLMLFFATLLSKLKEIRRFKPVEIVKEINQSFFDELDLVREA 170

Query: 379 AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS--RYVDELQGHERLKSAL 436
           ++ S+   NF        PK  +      V+V     G  VS    +D L    RL   L
Sbjct: 171 SNASQIRRNFENSTIHYVPKIYWEYTSSTVMVMERVGGVRVSDIETLDALGVDRRL---L 227

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS 496
           A  G       +  D F HADMHPGN+ + V+           + P  I +D G+   L+
Sbjct: 228 AQRGVEIFYSQVFDDCFFHADMHPGNMFIDVSNP---------ADPKYISIDFGIVGTLN 278

Query: 497 KTDRVNLVEFFKAVARRDGRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEG 553
           + D+  L   F A  +RD R  AE  +    +         ++ I  V E        E 
Sbjct: 279 RDDQRYLAGNFLAFFKRDYRKVAELHIESGWVPSDTRVDVLESAIRTVCEPIFEKPMKEI 338

Query: 554 DLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            L +    + QL    RR  +N+   +  +  T   +EG  +KL P  N+ +T + +L K
Sbjct: 339 SLGY---TLMQLFAVARRFNMNIQPQLTLLQKTLFHVEGLGQKLCPELNIWETSRPILEK 395

Query: 614 ADWAKS 619
             W K 
Sbjct: 396 --WMKE 399


>gi|307728448|ref|YP_003905672.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia sp. CCGE1003]
 gi|307582983|gb|ADN56381.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia sp. CCGE1003]
          Length = 525

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 180/394 (45%), Gaps = 23/394 (5%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP F+K+GQ  +TR DL P D+  +L++L  + P    A     +E++ G  +  
Sbjct: 55  ALESLGPIFVKFGQVLSTRRDLLPVDIANELAKLQDQVPPFDSAVAIGLVEKSLGAPVDV 114

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +FD FE  PVAS SIAQVH A+++    GQ      VAVKV  P +   I  D  ++ ++
Sbjct: 115 LFDDFERVPVASASIAQVHFATVK---AGQHAGK-AVAVKVLRPNMLPVIDSDLALLRDI 170

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A     +    K L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 171 AVWAERLWADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMYW 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  +S+ VD L+        LA  G       +  D F HADMHPG
Sbjct: 231 EFCTPTVLVMERMVGVPISQ-VDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V +      +          I LD G+   LS  D+  L + F A  +RD    A  
Sbjct: 290 NIQVSLDPAHFGR---------YIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVA-- 338

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVD 577
           TL L      P  +  +EE++ A      P  D     +   + + +L    RR  V + 
Sbjct: 339 TLHLESGWVPPTTR--VEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQ 396

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 397 PQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|444921453|ref|ZP_21241289.1| Putative ubiquinone biosynthesis protein UbiB [Wohlfahrtiimonas
           chitiniclastica SH04]
 gi|444507491|gb|ELV07667.1| Putative ubiquinone biosynthesis protein UbiB [Wohlfahrtiimonas
           chitiniclastica SH04]
          Length = 541

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 195/442 (44%), Gaps = 35/442 (7%)

Query: 183 ILLMRALYLGVLFSPS----IMMAPFADSFGPQFRELWLHVVLR-TLETAGPAFIKWGQW 237
           IL+   LY  V   P     + + P  +    ++++  L V +R  LE  GP F+K GQ 
Sbjct: 14  ILMRYGLYELVFLIPFFRLFVFLKPLVNLLN-KYKDTPLPVRIRLALEALGPTFVKLGQV 72

Query: 238 AATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSI 297
            +TR DLFP D  ++ S+L    P        + IERA  + +SE+F  F+E P+A+ SI
Sbjct: 73  LSTRNDLFPEDYIEEFSKLQDNVPAFDSNIAIEIIERALKQPISEVFREFDEVPLAAASI 132

Query: 298 AQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK-ISSVIPAVKWLR 356
           AQVH A L+    G       V VKV  P + + I RD  ++ + A+ +   +     LR
Sbjct: 133 AQVHSAILK---NGDH-----VVVKVVRPNIQKVILRDVQLMEMIAEAVEEYVAGGDRLR 184

Query: 357 LDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQG 416
             E V ++   ++S++DL REAA+  +   NF    ++  P          ++V     G
Sbjct: 185 PVEVVAEYKRTILSELDLTREAANGLQLKRNFEGSHEMYVPHIYLEYTSKNIMVMEKISG 244

Query: 417 ECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKR 476
             V  +V+ L+        LA +      K + VD+F HADMHPGNI V           
Sbjct: 245 IPVD-HVETLRDLGVNIPKLAELSVEVFFKQVFVDSFFHADMHPGNIFVDATDP------ 297

Query: 477 LFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKA 536
              + P  I LD G+   L + D+  L   F A   RD R  AE    L  +        
Sbjct: 298 ---ANPSYIALDYGIIGTLGEEDKHYLASNFLAFFNRDYRRVAE----LHVESGWVPADT 350

Query: 537 FIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLE 591
            IEE++ A        +  P  ++      +  L +  RR  + V   +  +  T   +E
Sbjct: 351 SIEELESAIRSICEPIFNKPLSEISFGG-LLLSLFQTGRRFNMVVQPQLVLLQKTLFNIE 409

Query: 592 GWQRKLDPGYNVMDTLQTLLLK 613
           G  RKL P  ++  T +  L+K
Sbjct: 410 GIGRKLYPELDLWKTAKPFLVK 431


>gi|421619652|ref|ZP_16060603.1| ubiquinone biosynthesis protein UbiB [Pseudomonas stutzeri KOS6]
 gi|409778264|gb|EKN57966.1| ubiquinone biosynthesis protein UbiB [Pseudomonas stutzeri KOS6]
          Length = 536

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 182/391 (46%), Gaps = 23/391 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK+GQ  +TR DL P D+ ++L+ L  + P    A     IER  G  + EI
Sbjct: 64  LEGLGPIFIKFGQILSTRRDLLPPDIAEELAMLQDRVPPFDSAVATALIERQLGAPVGEI 123

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  P+AS S+AQVH A LR    G++V   VV   +R P +G+ +   F++ N A 
Sbjct: 124 FARFDSKPLASASVAQVHAAKLR---SGEEVVVKVVRPNLR-PIIGQDLAWLFMLANTAE 179

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
           +IS  I A + L L E V  +A  +  ++DL REAA+ S+   NF     +  P+  +  
Sbjct: 180 RIS--IDARR-LHLVEVVDDYAKTIYDELDLLREAANASQLKRNFEGSALLYVPQVYWDY 236

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
             P VLV     G  V+      + +  ++  LA  G       +  D+F HADMHPGNI
Sbjct: 237 CRPQVLVMERIYGVPVTDMAGLARQNTDMRQ-LAERGVEIFFTQVFRDSFFHADMHPGNI 295

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
            V   Q  S         P  I +D G+   L+  D+  L     A  +RD R  A+  +
Sbjct: 296 FVSTHQPWS---------PQYIAVDFGIVGSLTPEDQDYLARNLMAFFKRDYRKVAQLHI 346

Query: 524 R---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
               +  +      +A I  V E    +  P  D+    + + +L +  RR  + V   +
Sbjct: 347 DSGWVPAETKVNEFEAAIRTVCE--PIFEKPLKDISF-GQLLVRLFQVARRFNMEVQPQL 403

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             +  T L +EG  R+L P  ++  T Q  L
Sbjct: 404 VLLQKTLLNIEGLGRELYPDLDLWSTGQPYL 434


>gi|300692533|ref|YP_003753528.1| ubiquinone biosynthetic 2-octaprenylphenol hydroxylase [Ralstonia
           solanacearum PSI07]
 gi|299079593|emb|CBJ52271.1| 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway
           [Ralstonia solanacearum PSI07]
 gi|344168840|emb|CCA81152.1| 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway
           [blood disease bacterium R229]
          Length = 525

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 181/395 (45%), Gaps = 25/395 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P          +E++ G+ LS 
Sbjct: 56  ALEQLGPIFVKFGQVLSTRRDLLPPDVADELARLQDRVPPFDPKVAAAIVEKSLGKPLSA 115

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +F  F+  PVAS SIAQVH A+LR    G       VAVKV  PG+   I  D  ++ ++
Sbjct: 116 LFHRFDHHPVASASIAQVHFATLR----GGPDDGREVAVKVLRPGMLPVIDSDLALMRDV 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 172 AMWMEKLWADGKRLKPREVVAEFDKYLHDELDLMREAANASQLRRNFADSDLLLVPEVFW 231

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 V V     G  +S +  EL+        LA  G       +  D F HADMHPG
Sbjct: 232 DWCTSEVFVMERMHGVRIS-HAAELREAGVDMHKLARDGVEIFFTQVFRDGFFHADMHPG 290

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV VA +         S    I LD G+   LS+ D+  L + F A  +RD    A  
Sbjct: 291 NILVSVAPE---------SLGRYIALDFGIVGALSEFDKNYLAQNFLAFFQRDYHRVA-- 339

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
              L  +      +  +EE++ A       ++  P G  +     + +L +  RR  V V
Sbjct: 340 --LLHVESGWAPEETRVEELEGAIRACCEPYFDRPLGQ-ISLGLVLMRLFQTSRRFNVEV 396

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 397 QPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAKPFL 431


>gi|323524737|ref|YP_004226890.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia sp. CCGE1001]
 gi|407712112|ref|YP_006832677.1| ubiquinone biosynthesis protein [Burkholderia phenoliruptrix
           BR3459a]
 gi|323381739|gb|ADX53830.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia sp. CCGE1001]
 gi|407234296|gb|AFT84495.1| ubiquinone biosynthesis protein [Burkholderia phenoliruptrix
           BR3459a]
          Length = 525

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 178/393 (45%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL P D+  +L++L  + P    A     +E++ G  +  +
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLPVDIANELAKLQDQVPPFDSAVAIGLVEKSLGAPVDVL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           FD FE  PVAS SIAQVH A+++    GQ      VAVKV  P +   I  D  ++ ++A
Sbjct: 116 FDDFERVPVASASIAQVHFATVK---AGQHAGK-AVAVKVLRPNMLPVIDSDLALLRDIA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                +    K L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 172 VWAERLWADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMYWE 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
              P VLV     G  +S+ VD L+        LA  G       +  D F HADMHPGN
Sbjct: 232 FCTPTVLVMERMVGVPISQ-VDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +      +          I LD G+   LS  D+  L + F A  +RD    A   
Sbjct: 291 IQVSLDPAHFGR---------YIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVATLH 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
           L    +     P   +EE++ A      P  D     +   + + +L    RR  V +  
Sbjct: 342 L----ESGWVPPTTRVEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 398 QLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|54295732|ref|YP_128147.1| hypothetical protein lpl2820 [Legionella pneumophila str. Lens]
 gi|53755564|emb|CAH17063.1| hypothetical protein lpl2820 [Legionella pneumophila str. Lens]
          Length = 549

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 182/396 (45%), Gaps = 25/396 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           ++LE  GP FIK+GQ  +TRPD+ P D+ K+LS+L  K P          IE+A+ +   
Sbjct: 60  KSLEELGPIFIKFGQALSTRPDILPEDIAKELSKLQDKVPPFPSHIAMNIIEQAYKQSAY 119

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
           ++F  F+   +AS S+AQVH A+L+    G+      V VK+  P +   I +D  I+  
Sbjct: 120 DVFAQFDPIALASASMAQVHAATLK---TGEN-----VVVKILRPNMRRLIEQDLSIMYT 171

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           +AA      P  K  +  E V++F   ++ ++DL REAA+ ++   NF +   +  P+  
Sbjct: 172 IAALADRYWPEGKRFKPKEIVKEFEHTLLDELDLMREAANAAQLRRNFNQSPMLYIPEIY 231

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +   H  +LV     G  V+  +  L+ H      LA  G       +  D F HADMHP
Sbjct: 232 WDYCHHNILVIERIHGIPVTD-IASLRAHGIDIKKLAERGVEIFFTQVFRDCFFHADMHP 290

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V     K          P  I +D G+   L+  D+  L E   A   RD +  AE
Sbjct: 291 GNIFVSYQNPKD---------PQYICVDFGIIGTLTDNDKRYLAENLVAFFNRDYKRVAE 341

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             +    +S+       ++ I  V E    +  P  D+    + + +L +  RR  + V 
Sbjct: 342 LHVESGWVSRDTPVAEFESSIRTVCE--PIFEKPLKDISF-GQVVFRLFQVARRFHMEVQ 398

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +  +  T L +EG  R+L P  ++  T +  L K
Sbjct: 399 PQLILLQKTLLAIEGLGRQLYPELDLWATAKPFLEK 434


>gi|187922659|ref|YP_001894301.1| ubiquinone biosynthesis protein UbiB [Burkholderia phytofirmans
           PsJN]
 gi|226695718|sp|B2SX38.1|UBIB_BURPP RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|187713853|gb|ACD15077.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia phytofirmans PsJN]
          Length = 525

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 180/394 (45%), Gaps = 23/394 (5%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP F+K+GQ  +TR DL P D+  +L++L  + P    A   + +E A G  +  
Sbjct: 55  ALESLGPIFVKFGQVLSTRRDLLPVDIADELAKLQDQVPPFESAVAIRLVENALGAPVDV 114

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +FD FE  PVAS SIAQVH A+++    GQ      VAVKV  P +   I  D  ++ ++
Sbjct: 115 LFDDFERVPVASASIAQVHFATVK---AGQHAGK-AVAVKVLRPNMLPVIDSDLALLRDI 170

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A     +    K L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 171 AVWAERLWADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMYW 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  +S+ V+ L+        LA  G       +  D F HADMHPG
Sbjct: 231 EFCTPTVLVMERMVGVPISQ-VETLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V +      +          I LD G+   LS  D+  L + F A  +RD    A  
Sbjct: 290 NIQVSLDPAHFGR---------YIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVA-- 338

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVD 577
           TL L      P  +  +EE++ A      P  D     +   + + +L    RR  V + 
Sbjct: 339 TLHLESGWVPPTTR--VEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQ 396

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 397 PQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|167039817|ref|YP_001662802.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter sp. X514]
 gi|300915397|ref|ZP_07132711.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter sp. X561]
 gi|307724859|ref|YP_003904610.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter sp. X513]
 gi|166854057|gb|ABY92466.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter sp. X514]
 gi|300888673|gb|EFK83821.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter sp. X561]
 gi|307581920|gb|ADN55319.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter sp. X513]
          Length = 558

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 173/386 (44%), Gaps = 27/386 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK GQ  +TRPD+ P+D+ K+L +L  K P  SF   K  I+  FG  L E 
Sbjct: 60  LEELGPTFIKMGQILSTRPDILPKDVIKELEKLQDKVPAFSFDEVKSVIQNEFGESLEEA 119

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           +  FE  P+A+ SIAQVH A L   + G+      V VKV+ PG+ + I +D  I+   A
Sbjct: 120 YAEFEPTPLAAASIAQVHMALL---WSGK-----TVVVKVQRPGIEKIIAQDMRILEDIA 171

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           K + +     K     + V+ F   +  ++D   E  +  +F  NF + K V  P  ++ 
Sbjct: 172 KFVDNHTKYGKLYNFTKMVEDFKKRLEEELDFRIEGENAEKFKKNFLKDKKVKIPSIIWT 231

Query: 403 LVHPAVLVETYEQGECVSRY--VDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                VL   Y  G  ++ +  +DE  G +R   A+A     ++L  +L D F H D HP
Sbjct: 232 HTTRRVLTMEYIDGIPLNDFNAIDE-AGLDR--GAIARNLAKSVLNQILRDGFFHGDPHP 288

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI+V                  + FLD GM   LS   +    +    +  ++ R   E
Sbjct: 289 GNIMV-------------LGDGTIAFLDFGMVGSLSPERKRQFSKMLLGIVYKNSRMITE 335

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
             + L+      N K   ++++     +     + +   E +  + + V  + + +    
Sbjct: 336 SIIDLNAVTLNVNMKKLEKDINNLRDRYVEIPLEKLKVGEVLNGIFDLVFSYNIVIPNEF 395

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDT 606
             +  + + LEG   KLDP  +V++ 
Sbjct: 396 NMLAKSLITLEGIVEKLDPKISVLEV 421


>gi|408420784|ref|YP_006762198.1| ubiquinone biosyntesis protein UbiB [Desulfobacula toluolica Tol2]
 gi|405107997|emb|CCK81494.1| UbiB: predicted ubiquinone biosyntesis protein [Desulfobacula
           toluolica Tol2]
          Length = 566

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 178/382 (46%), Gaps = 23/382 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK GQ  ++RPDL P DL  +L +L        F + K  I   FG+   +I
Sbjct: 74  LEELGPTFIKMGQILSSRPDLIPVDLLNELEKLQDHVKPFEFEHVKTIIASEFGKSHEKI 133

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           FD  EE   AS SI QVHRA        Q      +AVK++ PG+ ++I  D  ++++LA
Sbjct: 134 FDSIEETAFASASIGQVHRA--------QTHNHDQIAVKIQRPGIRKTIETDLEIMLHLA 185

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           + + + I  V   +  + V++FA  +  ++D + EA+++ R    F+  K +  PK    
Sbjct: 186 SIMENNIEEVALFKPVKIVEEFAKTLEKELDYSIEASNMQRMAQQFKDDKTIQIPKVYGA 245

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VL   Y +G   +  V+ ++     K  +   G   ++K +    F HAD HPGN
Sbjct: 246 ESSERVLAMEYIRG-IKADDVEAIESAGLDKKLITRRGADFIMKQVFEHGFFHADPHPGN 304

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I +               K  +  +D GMT  + +T R   V+   ++   + +  +   
Sbjct: 305 IFI-------------MKKNRICPVDFGMTGFIDQTTREVFVDLIHSITTNNFKLTSRLL 351

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCT 582
             L++ +  P+  +  ++V +  +   +     +  A+ + Q LE    H++ +  +   
Sbjct: 352 CELAEYEIQPDLTSLEKDVSQFVSLHLSKSLKDIKTAKMVNQFLELCAIHKLRIPPDFFL 411

Query: 583 VMVTTLVLEGWQRKLDPGYNVM 604
           ++   + +EG  +KLDP ++++
Sbjct: 412 MIKAFISIEGVAKKLDPDFDMI 433


>gi|154707471|ref|YP_001425425.1| 2-polyprenylphenol 6-hydroxylase accessory protein [Coxiella
           burnetii Dugway 5J108-111]
 gi|154356757|gb|ABS78219.1| 2-polyprenylphenol 6-hydroxylase accessory protein [Coxiella
           burnetii Dugway 5J108-111]
          Length = 541

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 150/298 (50%), Gaps = 19/298 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+ ++L +L  + P       K  IE++ G+ + +
Sbjct: 59  VLEELGPIFVKFGQLLSTRRDLLPDDIAEELEKLQDRVPPFPGKIAKAMIEKSCGKTIED 118

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
            F  F+E P+AS SIAQVH A+L   + G +     V +KV  P + ++I+RD  ++ L 
Sbjct: 119 CFATFDETPLASASIAQVHAATL---HDGSE-----VIIKVLRPNIAKTIQRDIALMYLG 170

Query: 343 AKISSVI-PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AK++       K L+  E V +F   +  ++DL REAA+ S+   NF   + +  PK  +
Sbjct: 171 AKLARRFWRHGKRLKPVEVVAEFEHTIYHELDLMREAANASQLRRNFADSEKMYVPKIYW 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
             VH  V+V     G  +S   +    +  LK  LA  G       +L D+F HADMHPG
Sbjct: 231 DYVHRDVMVMERIYGIRISNIAELKAANTNLKK-LAEYGVEIFFTQVLRDSFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           N+ V V   ++         P  + +D G+   LS  D+  + E   A  +RD R  A
Sbjct: 290 NLFVDVTDPEN---------PKYLGVDFGIMGALSPQDQRYIAENLLAFFKRDYRQVA 338


>gi|345018131|ref|YP_004820484.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|344033474|gb|AEM79200.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 558

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 173/386 (44%), Gaps = 27/386 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK GQ  +TRPD+ P+DL K+L +L  K P  SF   K  I+  FG  L E 
Sbjct: 60  LEELGPTFIKMGQILSTRPDILPKDLIKELEKLQDKVPAFSFDEVKSVIQNEFGESLEEA 119

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           +  FE  P+A+ SIAQVH A L   + G+      V VKV+ PG+ + I +D  I+   A
Sbjct: 120 YAEFEPTPLAAASIAQVHMAKL---WSGK-----TVVVKVQRPGIEKIIAQDMRILEDIA 171

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           K + +     K     + V+ F   +  ++D   E  +  +F  NF + K V  P  ++ 
Sbjct: 172 KFVDNRTKYGKLYNFTKMVEDFKKRLEEELDFRIEGENAEKFKKNFLKDKKVKIPSILWT 231

Query: 403 LVHPAVLVETYEQGECVSRY--VDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                VL   Y  G  ++ +  +DE  G +R   A+A     ++L  +L D F H D HP
Sbjct: 232 HTTRRVLTMEYIDGIPLNDFNAIDE-AGLDR--GAIARNLAKSVLNQILRDGFFHGDPHP 288

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI+V                  + FLD GM   LS   +    +    +  ++ R   E
Sbjct: 289 GNIMV-------------LGDGTIAFLDFGMVGSLSPERKRQFSKMLLGIVYKNSRMITE 335

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
             + L+      N K   ++++     +     + +   E +  + + V  + + +    
Sbjct: 336 SIIDLNAVTLNVNMKKLEKDINNLRNRYVEIPLEKLKVGEVLNGVFDLVFSYNIVIPNEF 395

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDT 606
             +  + + LEG   KL+P  +V++ 
Sbjct: 396 NMLAKSLITLEGIVEKLNPKISVLEV 421


>gi|397665512|ref|YP_006507050.1| 2-octaprenylphenol hydroxylase [Legionella pneumophila subsp.
           pneumophila]
 gi|395128923|emb|CCD07144.1| 2-octaprenylphenol hydroxylase [Legionella pneumophila subsp.
           pneumophila]
          Length = 549

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 182/396 (45%), Gaps = 25/396 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           ++LE  GP FIK+GQ  +TRPD+ P D+ K+LS+L  K P          IE+A+ +   
Sbjct: 60  KSLEELGPIFIKFGQALSTRPDILPEDIAKELSKLQDKVPPFPSHIAMNIIEQAYKQSAY 119

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
           ++F  F+   +AS S+AQVH A+L+    G+      V VK+  P +   I +D  I+  
Sbjct: 120 DVFAQFDPIALASASMAQVHAATLK---TGEN-----VVVKILRPNMRRLIEQDLSIMYT 171

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           +AA      P  K  +  E V++F   ++ ++DL REAA+ ++   NF +   +  P+  
Sbjct: 172 IAALADRYWPEGKRFKPKEIVKEFEHTLLDELDLMREAANAAQLRRNFNQSPMLYIPEIY 231

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +   H  +LV     G  V+  +  L+ H      LA  G       +  D F HADMHP
Sbjct: 232 WDYCHHNILVIERIHGIPVTD-IASLRDHGIDIKKLAERGVEIFFTQVFRDCFFHADMHP 290

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V     K          P  I +D G+   L+  D+  L E   A   RD +  AE
Sbjct: 291 GNIFVSYQNPKD---------PQYICVDFGIIGTLTDNDKRYLAENLVAFFNRDYKRVAE 341

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             +    +S+       ++ I  V E    +  P  D+    + + +L +  RR  + V 
Sbjct: 342 LHVESGWVSRDTPVAEFESSIRTVCE--PIFEKPLKDISF-GQVVFRLFQVARRFHMEVQ 398

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +  +  T L +EG  R+L P  ++  T +  L K
Sbjct: 399 PQLILLQKTLLAIEGLGRQLYPELDLWATAKPFLEK 434


>gi|341925982|dbj|BAK53884.1| ubiquinone biosynthesis protein [Chitiniphilus shinanonensis]
          Length = 505

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 171/395 (43%), Gaps = 33/395 (8%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP F+K+GQ  +TR DL P D+  +L+ L  + P          IE +  + L  
Sbjct: 55  ALESLGPIFVKFGQVLSTRRDLLPEDIADELAHLQDRVPPFPGEVAVAVIEASLRQPLES 114

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
           +F  F+  PVAS SIAQVHRA L   + GQ      VAVKV  PG+   I  D  ++  +
Sbjct: 115 LFAEFDRTPVASASIAQVHRARL---FNGQ-----AVAVKVLRPGIAPVIESDLALMRVM 166

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +  +    K LR  E V +F  ++  ++DL  EA + ++   NF     +  P+  Y
Sbjct: 167 AALVEKLFVDGKRLRPREVVAEFDKYLHDELDLMIEAGNAAQLRRNFLGSDQLIVPEVYY 226

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  V R VDEL         L+  G       +    F HADMHPG
Sbjct: 227 DWTSREVLTLEWMDGIPVGR-VDELLAAGMDLKKLSRFGVEIFFTQVFRHGFFHADMHPG 285

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V    +              I LD G+   LS +D+  L   F A   RD R  A  
Sbjct: 286 NIFVAADNR-------------YIALDFGIVGTLSDSDKQYLAINFLAFFNRDYRRVATA 332

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
            +    +         +EE++ A        +  P   +    + + +L E  RR  V +
Sbjct: 333 HI----ESGWVPKDTRVEELESAVRTVCEPIFNKPISQISF-GQVLLRLFETSRRFNVEI 387

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 388 QPQLVLLQKTLLNIEGLGRQLDPDLDLWQTAKPFL 422


>gi|307611782|emb|CBX01491.1| hypothetical protein LPW_31781 [Legionella pneumophila 130b]
          Length = 549

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 182/396 (45%), Gaps = 25/396 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           ++LE  GP FIK+GQ  +TRPD+ P D+ K+LS+L  K P          IE+A+ +   
Sbjct: 60  KSLEELGPIFIKFGQALSTRPDILPEDIAKELSKLQDKVPPFPSHIAMNIIEQAYKQSAY 119

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
           ++F  F+   +AS S+AQVH A+L+    G+      V VK+  P +   I +D  I+  
Sbjct: 120 DVFAQFDPIALASASMAQVHAATLK---TGEN-----VVVKILRPNMRRLIEQDLSIMYT 171

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           +AA      P  K  +  E V++F   ++ ++DL REAA+ ++   NF +   +  P+  
Sbjct: 172 IAALADRYWPEGKRFKPKEIVKEFEHTLLDELDLMREAANAAQLRRNFNQSPMLYIPEIY 231

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +   H  +LV     G  V+  +  L+ H      LA  G       +  D F HADMHP
Sbjct: 232 WDYCHHNILVIERIHGIPVTD-IASLRDHGIDIKKLAERGVEIFFTQVFRDCFFHADMHP 290

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V     K          P  I +D G+   L+  D+  L E   A   RD +  AE
Sbjct: 291 GNIFVSYQNPKD---------PQYICVDFGIIGTLTDNDKRYLAENLVAFFNRDYKRVAE 341

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             +    +S+       ++ I  V E    +  P  D+    + + +L +  RR  + V 
Sbjct: 342 LHVESGWVSRDTPVAEFESSIRTVCE--PIFEKPLKDISF-GQVVFRLFQVARRFHMEVQ 398

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +  +  T L +EG  R+L P  ++  T +  L K
Sbjct: 399 PQLILLQKTLLAIEGLGRQLYPELDLWATAKPFLEK 434


>gi|52843099|ref|YP_096898.1| ubiquinone biosynthesis AarF [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|378778784|ref|YP_005187226.1| ubiquinone biosynthesis AarF [Legionella pneumophila subsp.
           pneumophila ATCC 43290]
 gi|52630210|gb|AAU28951.1| ubiquinone biosynthesis AarF [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|364509602|gb|AEW53126.1| ubiquinone biosynthesis AarF [Legionella pneumophila subsp.
           pneumophila ATCC 43290]
          Length = 549

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 182/396 (45%), Gaps = 25/396 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           ++LE  GP FIK+GQ  +TRPD+ P D+ K+LS+L  K P          IE+A+ +   
Sbjct: 60  KSLEELGPIFIKFGQALSTRPDILPEDIAKELSKLQDKVPPFPSHIAMNIIEQAYKQSAY 119

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
           ++F  F+   +AS S+AQVH A+L+    G+      V VK+  P +   I +D  I+  
Sbjct: 120 DVFAQFDPIALASASMAQVHAATLK---TGEN-----VVVKILRPNMRRLIEQDLSIMYT 171

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           +AA      P  K  +  E V++F   ++ ++DL REAA+ ++   NF +   +  P+  
Sbjct: 172 IAALADRYWPEGKRFKPKEIVKEFEHTLLDELDLMREAANAAQLRRNFNQSPMLYIPEIY 231

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +   H  +LV     G  V+  +  L+ H      LA  G       +  D F HADMHP
Sbjct: 232 WDYCHHNILVIERIHGIPVTD-IASLRDHGIDIKKLAERGVEIFFTQVFRDCFFHADMHP 290

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V     K          P  I +D G+   L+  D+  L E   A   RD +  AE
Sbjct: 291 GNIFVSYQNPKD---------PQYICVDFGIIGTLTDNDKRYLAENLVAFFNRDYKRVAE 341

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             +    +S+       ++ I  V E    +  P  D+    + + +L +  RR  + V 
Sbjct: 342 LHVESGWVSRDTPVAEFESSIRTVCE--PIFEKPLKDISF-GQVVFRLFQVARRFHMEVQ 398

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +  +  T L +EG  R+L P  ++  T +  L K
Sbjct: 399 PQLILLQKTLLAIEGLGRQLYPELDLWATAKPFLEK 434


>gi|294669865|ref|ZP_06734924.1| hypothetical protein NEIELOOT_01758 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308258|gb|EFE49501.1| hypothetical protein NEIELOOT_01758 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 599

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 180/390 (46%), Gaps = 26/390 (6%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  GP F+K GQ  +TR D+F  +  ++  +L       +       IE   GR ++E+F
Sbjct: 114 EELGPTFVKLGQILSTRVDIFNAEWIEEFEQLQCNVAPIATEDIGALIEARLGRPMNEVF 173

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-LAA 343
              +  PV S SIAQVH A LR    G++V     AVK++ P + +SIR D  I+N LAA
Sbjct: 174 AELDGKPVGSASIAQVHGAVLR---NGERV-----AVKIKRPDIEKSIRADLRILNHLAA 225

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            I + IP  +  R  + VQ FA  +  + DL+ E  ++ RF   F     V  PK     
Sbjct: 226 LIETEIPETRRYRPVQMVQYFARSLARETDLSFELRYMQRFANAFAGHPFVHIPKVYAEY 285

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
            +  +LV+ Y  G  + R+ D  +     ++ LA   T  L  M+L   F HAD HPGNI
Sbjct: 286 SNRQILVQEYVGGTLL-RHADIDRMPSETRAILARRITDTLFAMILQQGFFHADPHPGNI 344

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
            +             R    +  +D G+   LS   R  ++   KA+A RD  T  +  L
Sbjct: 345 FI-------------RDDGRISLIDFGLVGHLSAPRRHEILSLIKALAERDPFT-MQYVL 390

Query: 524 RLSKQQNCPNPKAFIEEVDEA-FAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCT 582
               Q   P+      +V E    +  TP  DL   ++ +  + + +R H + +  ++  
Sbjct: 391 GNWAQGELPDENLLGADVLEMLLNYENTPVSDL-RISQVINDITQIMRGHGLTLPADLVM 449

Query: 583 VMVTTLVLEGWQRKLDPGYNVMDTLQTLLL 612
           +  T + LEG  ++LD    +++  + ++L
Sbjct: 450 LFKTLITLEGVVKRLDGSTELLEQAKPIVL 479


>gi|253999706|ref|YP_003051769.1| putative ubiquinone biosynthesis protein UbiB [Methylovorus
           glucosetrophus SIP3-4]
 gi|253986385|gb|ACT51242.1| 2-polyprenylphenol 6-hydroxylase [Methylovorus glucosetrophus
           SIP3-4]
          Length = 506

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 183/398 (45%), Gaps = 39/398 (9%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+  +L++L  + P   +      +E A+G  +++
Sbjct: 55  ALEALGPIFVKFGQMLSTRRDLIPLDIADELAKLQDRVPPFPYEQAAAIMEAAYGMPVAQ 114

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F+ F+  P+AS S+AQVH ASL    PG +     VAVK+  PG+G  I +D  +++ A
Sbjct: 115 VFERFDITPIASASVAQVHFASL----PGGR----EVAVKILRPGIGTIIEKDLALLDSA 166

Query: 343 A----KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
           A    K+SS     + L+  E V +FA  + S++DL  EAA+ S    NF+  + +  P 
Sbjct: 167 AWLFHKVSS---DGRRLKPREVVAEFARHIHSELDLMLEAANCSLLGRNFKDKRLLLVPD 223

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +      V+V     G  +S+ V  L+        LA  G       +  D F HADM
Sbjct: 224 VYWDWCREQVMVMDRMNGIPISQ-VAHLRSIGVDIPKLARDGVEIFFTQVFRDGFFHADM 282

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI V    +              + LD G+   L++ D+  L   F A  RRD R  
Sbjct: 283 HPGNIQVAPDGR-------------YVALDFGIMGSLTEIDKQYLARNFLAFFRRDYREV 329

Query: 519 AECTLRLS-KQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHR 573
           A   +      ++ P     +EE + A      P  D     +     + +L +  RR  
Sbjct: 330 ARAHIESGWAPKDTP-----LEEFETAIRAVCEPIFDKPISEISFGRVLLRLFQTSRRFG 384

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V +   +  +  T L +EG  R LDP  ++  T Q  L
Sbjct: 385 VEIQPQLTMLQKTLLNVEGLGRDLDPQLDLWKTAQPYL 422


>gi|34496446|ref|NP_900661.1| ubiquinone biosynthesis protein UbiB [Chromobacterium violaceum
           ATCC 12472]
 gi|48428617|sp|Q7NZD1.1|UBIB_CHRVO RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|34102299|gb|AAQ58665.1| ubiquinone biosynthesis protein AarF [Chromobacterium violaceum
           ATCC 12472]
          Length = 508

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 181/400 (45%), Gaps = 36/400 (9%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL P +   +L+ L  + P       ++ +ER+ GR++ E+
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLPPEYADELALLQDRVPPFDGDIARQVVERSLGRKVEEL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F  F+  PVAS S+AQVH+A LR    G+  +   VAVKV  PG+   I +D  ++  LA
Sbjct: 116 FVDFDLKPVASASVAQVHKAWLRQPDGGRGRE---VAVKVLRPGILPVIEQDLSLMRTLA 172

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  +    K L+  E V +F  ++  ++D+  EAA+ S+   NF+    +  P+  Y 
Sbjct: 173 GWVEKLFADGKRLKPREVVAEFDKYLHDELDMMHEAANASQLRRNFKGSDMLIVPEVFYD 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIHA 456
                VL   +  G  V +        ERL+ A      L+  G       +    F HA
Sbjct: 233 YSSREVLTLEWMHGIPVGQI-------ERLREAGVDLQKLSRFGVEIFFTQVFRHGFFHA 285

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNI V    +              I LD G+   L+ TD+  L   F A   RD  
Sbjct: 286 DMHPGNIFVAADGR-------------YIALDFGIVGSLTDTDKHYLAVNFLAFFNRDYH 332

Query: 517 TAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
             A   +    + +       +A +  V E    +  P  ++      + +L E  RR  
Sbjct: 333 RVATAHIESGWVPRDTRAEELEAAVRTVCE--PIFEKPLSEISF-GMVLLRLFETSRRFN 389

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           V +   +  +  T L +EG  R+LDP  ++ DT +  L K
Sbjct: 390 VEIQPQLVLLQKTLLNIEGLGRQLDPELDLWDTAKPFLTK 429


>gi|419849284|ref|ZP_14372340.1| ABC1 family protein [Bifidobacterium longum subsp. longum 35B]
 gi|419852425|ref|ZP_14375300.1| ABC1 family protein [Bifidobacterium longum subsp. longum 2-2B]
 gi|386410681|gb|EIJ25456.1| ABC1 family protein [Bifidobacterium longum subsp. longum 2-2B]
 gi|386412406|gb|EIJ27077.1| ABC1 family protein [Bifidobacterium longum subsp. longum 35B]
          Length = 606

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 178/388 (45%), Gaps = 31/388 (7%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  GP F+K GQ  + R ++ P+  C +L++L + A    ++     +   +GR   E+F
Sbjct: 111 EALGPTFVKVGQILSMRSEILPQSFCDELAKLRADADPMPYSTVLDVLAAEYGRPADEVF 170

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
              +  P+ S S+AQVHRA+L+    G+      VA+KV+ PGV E + +D  I+   AK
Sbjct: 171 AHIDPKPLGSASLAQVHRATLK---TGED-----VAIKVQRPGVREIMAQDVSIMRSIAK 222

Query: 345 ISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            ++ VI   + + L   V++      S+ D   EA +L+ F     R+K +  P     L
Sbjct: 223 AATKVIRTSQIVDLKGVVEELWDTFESETDFLIEARNLAEFKRFAARFKYMDCPTVYAEL 282

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL---LKMLLVDNFIHADMHP 460
               V+V  Y  G  VS     +     LK     IGT  +      +L D F HAD HP
Sbjct: 283 CTEHVVVMEYIDGISVSHPGQLIDAGYDLK----EIGTKLVDNYATQILDDGFFHADPHP 338

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNIL+R  Q              +I +D+GMT  L +  R  L E   AVA++D    AE
Sbjct: 339 GNILIRGGQ--------------IILIDLGMTGRLDQRTRAVLKEMIFAVAKQDSPALAE 384

Query: 521 CTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
             LR +  +  P    A + ++D     +GT +   +  A  +  L +   RH + V   
Sbjct: 385 GLLRFAGTEADPEDYPALLADLDVIVKEFGTVDLAELDIAAFLTALTQMAGRHNIEVPST 444

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
           V TV    + LEG   +  P  N+++ +
Sbjct: 445 VTTVGRALVTLEGLLDEFIPDVNMIEII 472


>gi|350553412|ref|ZP_08922588.1| ubiquinone biosynthesis protein ubiB [Thiorhodospira sibirica ATCC
           700588]
 gi|349790774|gb|EGZ44675.1| ubiquinone biosynthesis protein ubiB [Thiorhodospira sibirica ATCC
           700588]
          Length = 556

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 180/397 (45%), Gaps = 37/397 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           + RTLE  GP FIK+GQ  +TR DL P D+ K+L+ L  + P    A     IERA G+ 
Sbjct: 60  IRRTLEDLGPIFIKFGQMLSTRRDLLPDDIAKELARLQDRVPPFPDAQAFAIIERALGKP 119

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD---- 335
           +SE+F  F++ P+AS SIAQV+ A L    P        V VKV  P +   IRRD    
Sbjct: 120 ISEVFLAFDKTPLASASIAQVYAAVLHSGEP--------VVVKVVRPDILPVIRRDLQLM 171

Query: 336 FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS 395
           +++  LA +  S  P    LR  E V ++   ++ ++DL REAA+ ++   NF     + 
Sbjct: 172 YIMAQLAERYWSEGPR---LRPVEVVAEYEKTILDELDLMREAANATQIKRNFSGSSILY 228

Query: 396 FPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHI---GTHALLKMLLVDN 452
            P   +      V+V     G  V+    ++Q    + + L  +   G       +   N
Sbjct: 229 IPTIYWDYTRRQVMVMERIHGVPVA----DMQALSAVGADLKLLSERGVEIFFTQVFRHN 284

Query: 453 FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR 512
           F HADMHPGNI + +   +          P  I +D G+   L+  DR  L E F A   
Sbjct: 285 FFHADMHPGNIFIDIDIPED---------PTYIAVDFGIVGTLTGADRRYLAENFHAFFN 335

Query: 513 RDGRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKV 569
           RD R  AE  +    +         ++ I  V E    +  P  D+    + + +L +  
Sbjct: 336 RDYRRVAELHVESGWVPADTRTEQLESAIRSVCE--PIFQRPLKDISF-GQLLLRLFQTA 392

Query: 570 RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           RR+ + V   +  +  T L +EG  R L P  ++  T
Sbjct: 393 RRYDMQVQPQLVLLQKTLLNIEGLGRDLYPDLDLWKT 429


>gi|34498422|ref|NP_902637.1| ubiquinone biosynthesis protein [Chromobacterium violaceum ATCC
           12472]
 gi|34104276|gb|AAQ60635.1| probable ubiquinone biosynthesis protein [Chromobacterium violaceum
           ATCC 12472]
          Length = 560

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 185/388 (47%), Gaps = 38/388 (9%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  GP FIK GQ  +TR D+FP D   +  +L ++ P    A  +K I    G    ++F
Sbjct: 69  EELGPTFIKLGQILSTRVDVFPPDWIDEFEKLQNRVPPLPPAMVRKMIVDTLGAEADQLF 128

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLAA 343
             F+  P+ S SIAQVHRA L+    G++     VAVK+R PG+ + +  D  ++ +LA 
Sbjct: 129 AEFDMQPIGSASIAQVHRARLK---DGRE-----VAVKLRRPGIADKVEADLRILAHLAH 180

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            +    P ++  +      QFA  +  ++DLA EA ++ RF  +F     V  P+  +  
Sbjct: 181 LLELEFPELRRYQPSGIAAQFARSLRRELDLAIEARNMERFAKDFVDDPFVMVPQVHWEY 240

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDNFIHAD 457
            + AV V+T+  G   S          RLK +      LA  G  A+LKM+L++ F HAD
Sbjct: 241 TNAAVNVQTFVDGVPASDL-------SRLKDSGLDPVLLAQRGADAVLKMILINGFFHAD 293

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGN+              F ++  + F+D GM   +S   R  +V+   AVA R+   
Sbjct: 294 PHPGNV-------------FFLAEHRIAFIDFGMVGRISHARRDEIVDLLSAVAERNEHG 340

Query: 518 AAECTLRLSKQQNCPNPKAFIEEVDE-AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
             +  +  +      + + F +EV E  F +   P   L + ++ +  ++  +R H + +
Sbjct: 341 IIDVLVEWTGSAPV-DMQKFADEVGEFMFQYEHLPLKGL-NISQLISDIMALIRNHGIVL 398

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
             ++  +    + LEG  R+L+P + ++
Sbjct: 399 PPDMAMLFKALVTLEGLGRQLNPDFQLV 426


>gi|148361232|ref|YP_001252439.1| ubiquinone biosynthesis AarF [Legionella pneumophila str. Corby]
 gi|296108569|ref|YP_003620270.1| ubiquinone biosynthesis protein [Legionella pneumophila 2300/99
           Alcoy]
 gi|148283005|gb|ABQ57093.1| ubiquinone biosynthesis AarF [Legionella pneumophila str. Corby]
 gi|295650471|gb|ADG26318.1| ubiquinone biosynthesis protein [Legionella pneumophila 2300/99
           Alcoy]
          Length = 549

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 182/396 (45%), Gaps = 25/396 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           ++LE  GP FIK+GQ  +TRPD+ P D+ K+LS+L  K P          IE+A+ +   
Sbjct: 60  KSLEELGPIFIKFGQALSTRPDILPEDIAKELSKLQDKVPPFPSHVAMNIIEQAYKQSAY 119

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
           ++F  F+   +AS S+AQVH A+L+    G+      V VK+  P +   I +D  I+  
Sbjct: 120 DVFAQFDPIALASASMAQVHAATLK---TGEN-----VVVKILRPNMRRLIEQDLNIMYT 171

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           +AA      P  K  +  E V++F   ++ ++DL REAA+ ++   NF +   +  P+  
Sbjct: 172 IAALADRYWPEGKRFKPKEIVKEFEHTLLDELDLMREAANAAQLRRNFNQSPMLYIPEIY 231

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +   H  +LV     G  V+  +  L+ H      LA  G       +  D F HADMHP
Sbjct: 232 WDYCHHNILVIERIHGIPVTD-IASLRDHGIDIKKLAERGVEIFFTQVFRDCFFHADMHP 290

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V     K          P  I +D G+   L+  D+  L E   A   RD +  AE
Sbjct: 291 GNIFVSYQNPKD---------PQYICVDFGIIGTLTDNDKRYLAENLVAFFNRDYKRVAE 341

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             +    +S+       ++ I  V E    +  P  D+    + + +L +  RR  + V 
Sbjct: 342 LHVESGWVSRDTPVAEFESSIRTVCE--PIFEKPLKDISF-GQVVFRLFQVARRFHMEVQ 398

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +  +  T L +EG  R+L P  ++  T +  L K
Sbjct: 399 PQLILLQKTLLAIEGLGRQLYPELDLWATAKPFLEK 434


>gi|334341280|ref|YP_004546260.1| ABC-1 domain-containing protein [Desulfotomaculum ruminis DSM 2154]
 gi|334092634|gb|AEG60974.1| ABC-1 domain-containing protein [Desulfotomaculum ruminis DSM 2154]
          Length = 557

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 174/392 (44%), Gaps = 33/392 (8%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP +IK GQ A+TRPD+ P  +  +L +L  K P  SFA     IE+  G  L E
Sbjct: 61  VLQQLGPTYIKLGQIASTRPDILPPAILSELEKLQDKVPPFSFAQVTSVIEQELGAELEE 120

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           IF+ F+  P+A+ SI QVH+A LR    G+K     VAVK++ PG+  +I  D  I+   
Sbjct: 121 IFEQFDPDPLAAASIGQVHQAVLR---TGEK-----VAVKIQRPGIAANIETDLEILYEL 172

Query: 343 AKISSVIPAVKW---LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
           A+++      +W    ++ + V +FA  + +++D   EA +  +    F+    +  PK 
Sbjct: 173 ARLAQ--RRFQWAEAYQIVDIVDEFAKSLGNELDYTIEARNAEKIYKQFQDNAQIYIPKV 230

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
            +      VL   Y  G  +S   D L       S LA      +   + ++ F H D H
Sbjct: 231 YWDYSSKKVLTAEYIAGIKISER-DSLAQQGYHLSLLAERFAKGIFHQIFIEGFFHGDPH 289

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGN++V   +              + FLD GM   LS   + +L      + R++     
Sbjct: 290 PGNVVVLPGEI-------------IAFLDFGMVGRLSPDMKYHLSSIVIGLMRQNSDDLL 336

Query: 520 ECTLRLS---KQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
           +  LR+       N    +  IE + E   ++G P    +   E +  +      H++ +
Sbjct: 337 KTLLRMGIVPDDVNMVKLRDDIEILRE--KYYGVPLSQ-ISLGEAVNNIFAVTLTHKIKM 393

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
             +   V    L +EG   KLDP  +++D  Q
Sbjct: 394 PADFALVGKALLTMEGIAEKLDPKLSILDIAQ 425


>gi|170691436|ref|ZP_02882601.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia graminis C4D1M]
 gi|170143641|gb|EDT11804.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia graminis C4D1M]
          Length = 525

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 179/393 (45%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL P D+  +L++L  + P          +E++ G  +  +
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLPVDIANELAKLQDQVPPFDSTVAIGLVEKSLGAPVDVL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           FD FE  PVAS SIAQVH A+++    GQ      VAVKV  P +   I  D  ++ ++A
Sbjct: 116 FDDFERVPVASASIAQVHFATVK---AGQHAGK-AVAVKVLRPNMLPVIDSDLALLRDIA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                +    K L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 172 VWAERLWADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMYWE 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
              P VLV     G  +S+ VD L+        LA  G       +  D F HADMHPGN
Sbjct: 232 FCTPTVLVMERMVGVPISQ-VDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +      +          I LD G+   LS  D+  L + F A  +RD    A  T
Sbjct: 291 IQVSLDPAHFGR---------YIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVA--T 339

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
           L L      P  +  +EE++ A      P  D     +   + + +L    RR  V +  
Sbjct: 340 LHLESGWVPPTTR--VEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 398 QLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|407793548|ref|ZP_11140581.1| protein kinase [Idiomarina xiamenensis 10-D-4]
 gi|407214625|gb|EKE84469.1| protein kinase [Idiomarina xiamenensis 10-D-4]
          Length = 557

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 182/393 (46%), Gaps = 22/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSE 282
           L+T GP ++K+GQ  +TR DL P D+  +L+ L  K P    A  ++ IERA     +S 
Sbjct: 58  LQTLGPVWVKFGQMLSTRRDLLPADIANELALLQDKVPPFDGAQAQRLIERALAVSDISL 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
           +FD F + P+AS SIAQVH A LR       V+ IV  +KV  P +   I  D  +++ L
Sbjct: 118 LFDNFSQQPLASASIAQVHTAQLRLL--DGSVEDIV--IKVIRPDIKNVIHADLKLMDTL 173

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ ++  +P  K L+  E ++++   ++ +++LAREAA+  +   NF     +  PK   
Sbjct: 174 ASVLAKHLPDGKRLKPREVIREYRKTLLDELNLAREAANAIQLKRNFEGSDLLYIPKVYS 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 V+V     G  +S  V+ L+        LA  G       +  D+F HADMHPG
Sbjct: 234 DFSRENVMVMERIDGIPISE-VETLRARGVDMKKLAERGVEVFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI   VA+            P  I +D G+   L++ D+  L E F A   RD R  AE 
Sbjct: 293 NIF--VAKDDPLH-------PRYIGIDCGIVGTLNREDKRYLAENFLAFFNRDYRKVAEL 343

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    + K  N  + ++ I  V E        E    H    +  L    RR  + V  
Sbjct: 344 HVDSGWVPKHTNIEDFESAIRTVCEPIFQKPLAEISFGH---VLVNLFNTARRFEMEVQP 400

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++  T +  L
Sbjct: 401 QLVLLQKTLLYIEGLGRQLYPELDLWKTAKPFL 433


>gi|399019877|ref|ZP_10722020.1| 2-polyprenylphenol 6-hydroxylase [Herbaspirillum sp. CF444]
 gi|398096896|gb|EJL87211.1| 2-polyprenylphenol 6-hydroxylase [Herbaspirillum sp. CF444]
          Length = 523

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 179/391 (45%), Gaps = 29/391 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P          I+++ G    
Sbjct: 56  RALEDLGPIFVKFGQVLSTRRDLLPLDIADELTRLQDRVPPFDSDLAIAQIQKSLGAHPD 115

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
            +F  F+  P+AS SIAQVH A+L+            VAVKV  PG+  +I  D  ++++
Sbjct: 116 TLFASFDRTPIASASIAQVHFATLK--------DGTDVAVKVLRPGMRTTIDHDIGLMHI 167

Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           AA  +  +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  
Sbjct: 168 AADWVERLWADGRRLKAKEVVAEFDKYLHDELDLMREAANASQLRRNFANSDLLMVPEMY 227

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +     +V+V     G  + +    L+    L+  L+  G       +  D F HADMHP
Sbjct: 228 WDYCSSSVIVMERMHGIPIGQTARLLEEGVDLEK-LSRDGVEIFFTQVFRDGFFHADMHP 286

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNILV  A     +          I LD G+   L+  D+  L + F A  RRD +  AE
Sbjct: 287 GNILVSTAPATFGR---------YIALDFGIVGTLTDFDKDYLSQNFLAFFRRDYKRVAE 337

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
             +    +      +  ++E++ A        +  P  D+    + + +L +  RR  V 
Sbjct: 338 AHI----ESGWAPKETRVDELEAAVRACCEPIFDRPLKDISF-GQVLLRLFQTSRRFNVE 392

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           V   +  +  T L +EG  R+LDP  ++  T
Sbjct: 393 VQPQLVLLQKTLLNVEGLGRQLDPDLDLWKT 423


>gi|416214252|ref|ZP_11622847.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis
           M01-240013]
 gi|325144055|gb|EGC66365.1| 2-polyprenylphenol 6-hydroxylase [Neisseria meningitidis
           M01-240013]
          Length = 503

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 180/395 (45%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE+ GP FIK+GQ  +TRPDL P D   +L++L  K P      +++ IE++ G+ + +
Sbjct: 57  ALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLSREQIEKSLGQSIEK 116

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL- 341
           ++  FE  P+AS SIAQVH+A L   + G++     VAVKV  P +   I +D  ++   
Sbjct: 117 LYAEFETEPIASASIAQVHKARL---HSGER-----VAVKVLRPNLLPLIEQDLSLMRFG 168

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +  +    + L+  E V +F  ++  ++DL REAA+  +   NF+    +  PK  Y
Sbjct: 169 AAWVERLFSDGRRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFQNSNMLIVPKVFY 228

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   +  G  V+  + +L+        LA  G       +  D F HADMHPG
Sbjct: 229 DYCTSDVLTIEWMDGTPVAD-IAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NILV    +              I LD G+   L+  D+  L   F A   RD R  A  
Sbjct: 288 NILVAADNR-------------YIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA 334

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +         +A +  V E    +  P   +      + +L E  R   V +  
Sbjct: 335 HIESGWVPADTRAEELEAAVRAVCE--PVFNKPISQISF-GLVLMRLFEVSRCFNVEIQP 391

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            +  +  T L +EG  R+LDP  ++  T +  L+K
Sbjct: 392 QLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVK 426


>gi|449136791|ref|ZP_21772157.1| ubiquinone biosynthesis protein UbiB [Rhodopirellula europaea 6C]
 gi|448884580|gb|EMB15066.1| ubiquinone biosynthesis protein UbiB [Rhodopirellula europaea 6C]
          Length = 559

 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 176/387 (45%), Gaps = 12/387 (3%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  G  FIK GQ  +TR DL  R+L  +L++L +  P          IE   G  + E+F
Sbjct: 62  EELGTTFIKLGQVLSTREDLVGRELACELAQLRANTPSDPADVVIAMIESELGAGIDELF 121

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
             F+   +AS SI QVHRA+    + G       V VKV+HPG+ + I  D  I+   A+
Sbjct: 122 LKFDSTAMASASIGQVHRATT---HEGHD-----VVVKVQHPGIEQRIVNDLEIMQKLAE 173

Query: 345 ISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
           I+      +   R  +++++F   +M ++D  RE  +++RF  NF+   DV F KP   L
Sbjct: 174 IAEQQSERLTQYRPVDTIREFQRSLMRELDFQRELKNMNRFRTNFQDEPDVHFAKPYPKL 233

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
               VL      G  VS    EL+      + +AH G    L M+  D F HAD HPGN+
Sbjct: 234 SSRRVLTMQRLDGISVSNKA-ELKTSGADLNEVAHRGAVVFLDMIFRDGFYHADPHPGNL 292

Query: 464 LV--RVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           +V  R    +        +K  +  LD GM   +    + +L     A    D  + AE 
Sbjct: 293 MVLNRHVPSQDPSNDGPPAKQVIGLLDCGMVGRIDDALKDDLEVALIAAVTGDAESIAEI 352

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVC 581
            +RL       +  + + E+ +    +   +      + C++ +   +R HR+ +   V 
Sbjct: 353 AVRLGDVPCDFDEPSLVSEIRDMLDDYADQKLREFDVSACLRDVTGIIREHRIYLPAKVA 412

Query: 582 TVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
            ++    +LEG   +L+P +++ + L+
Sbjct: 413 MLLKVLAMLEGTAHQLNPNFSLAELLE 439


>gi|424762592|ref|ZP_18190096.1| ABC1 family protein [Enterococcus faecalis TX1337RF]
 gi|402424482|gb|EJV56659.1| ABC1 family protein [Enterococcus faecium TX1337RF]
          Length = 582

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 182/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 36  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 95

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +S+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 96  VSDIFDDFSKSPFASASMGQAHRAKLK---SGD-----AVVVKIQHPNIAEEIRLDLQLF 147

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    ++++++  +E+ +  +F      WK++  PK 
Sbjct: 148 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMNFLKESQNGEQFYQKNNGWKEIRSPKI 207

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDE-------LQG--HERLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++        + G  +++LK  +A +     +K +  
Sbjct: 208 YDAFCSKKVIVMEEMSGKNLNHLMNAENRTETFITGIQNKQLKQEVAKLLVENFMKQVFD 267

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKR---------------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V  K+   +                 FR+         P+ + +
Sbjct: 268 DGFFHADPHPGNLLFHVLTKEEQTRARRTTETVHEKEFGPFAFRASTSIEDPVAPYTVNY 327

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 328 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGLFDESRFHQELTSFLE 387

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E   Q++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 388 QYYDSPIDEINLQEVFAQVVMICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 446


>gi|227550859|ref|ZP_03980908.1| ubiquinone biosynthesis protein UbiB [Enterococcus faecium TX1330]
 gi|227179957|gb|EEI60929.1| ubiquinone biosynthesis protein UbiB [Enterococcus faecium TX1330]
          Length = 583

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 182/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 37  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 96

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +S+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 97  VSDIFDDFSKSPFASASMGQAHRAKLK---SGD-----AVVVKIQHPNIAEEIRLDLQLF 148

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    ++++++  +E+ +  +F      WK++  PK 
Sbjct: 149 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMNFLKESQNGEQFYQKNNGWKEIRSPKI 208

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDE-------LQG--HERLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++        + G  +++LK  +A +     +K +  
Sbjct: 209 YDAFCSKKVIVMEEMSGKNLNHLMNAENRTETFITGIQNKQLKQEVAKLLVENFMKQVFD 268

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKR---------------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V  K+   +                 FR+         P+ + +
Sbjct: 269 DGFFHADPHPGNLLFHVLTKEEQTRARRTTETVHEKEFGPFAFRASTSIEDPVAPYTVNY 328

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 329 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGLFDESRFHQELTSFLE 388

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E   Q++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 389 QYYDSPIDEINLQEVFAQVVMICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 447


>gi|257896493|ref|ZP_05676146.1| ABC1 family protein [Enterococcus faecium Com12]
 gi|431752975|ref|ZP_19541654.1| ubiquinone biosynthesis protein [Enterococcus faecium E2620]
 gi|431757807|ref|ZP_19546436.1| ubiquinone biosynthesis protein [Enterococcus faecium E3083]
 gi|257833058|gb|EEV59479.1| ABC1 family protein [Enterococcus faecium Com12]
 gi|430612936|gb|ELB49960.1| ubiquinone biosynthesis protein [Enterococcus faecium E2620]
 gi|430618312|gb|ELB55159.1| ubiquinone biosynthesis protein [Enterococcus faecium E3083]
          Length = 581

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 182/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 35  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 94

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +S+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 95  VSDIFDDFSKSPFASASMGQAHRAKLK---SGD-----AVVVKIQHPNIAEEIRLDLQLF 146

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    ++++++  +E+ +  +F      WK++  PK 
Sbjct: 147 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMNFLKESQNGEQFYQKNNGWKEIRSPKI 206

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDE-------LQG--HERLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++        + G  +++LK  +A +     +K +  
Sbjct: 207 YDAFCSKKVIVMEEMSGKNLNHLMNAENRTETFITGIQNKQLKQEVAKLLVENFMKQVFD 266

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKR---------------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V  K+   +                 FR+         P+ + +
Sbjct: 267 DGFFHADPHPGNLLFHVLTKEEQTRARRTTETVHEKEFGPFAFRASTSIEDPVAPYTVNY 326

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 327 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGLFDESRFHQELTSFLE 386

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E   Q++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 387 QYYDSPIDEINLQEVFAQVVMICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 445


>gi|194468047|ref|ZP_03074033.1| ABC-1 domain protein [Lactobacillus reuteri 100-23]
 gi|194452900|gb|EDX41798.1| ABC-1 domain protein [Lactobacillus reuteri 100-23]
          Length = 578

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 186/421 (44%), Gaps = 42/421 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           + + L+  GP FIK GQ  +TRPDL      K+L  L  +    SFA  ++T E   G++
Sbjct: 39  ICQALQELGPTFIKLGQILSTRPDLVSPAYIKELRHLQDQVKADSFATVEQTFEEETGKK 98

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +++ F  F E P AS SI QVH A+L+   P        V VKV+HP VG+ +  D  ++
Sbjct: 99  INDEFASFTEKPFASASIGQVHHATLKDGIP--------VVVKVQHPEVGKLVNTDLALL 150

Query: 340 NLAAKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             A  +   +P  +  + LD+ + + +  ++S+V+   EA +   F         +  PK
Sbjct: 151 RKAVVLFKYVPQDIAVVDLDKVIDELSTSLLSEVNTLEEAKNGEEFYTLNNGDGPILVPK 210

Query: 399 PVYPLVHPAVLVETYEQGECVSRY-----VDELQGHERLKSALAHIGTHALLKMLLVDNF 453
                  P +LV    +G+ + RY      D  Q    +   +A    +  LK + VD++
Sbjct: 211 VYMKYCAPKILVNEAMEGKSI-RYRFKQPNDNDQEAMTVNHEIATTLVNNFLKQVFVDHY 269

Query: 454 IHADMHPGNILVRVAQKKSSQKRLFRSKPH---------------------VIFLDVGMT 492
            HAD HPGNIL+   +   S K+   +K H                     +I+LD GM 
Sbjct: 270 FHADPHPGNILIHELRPDESAKQYATTKHHEKTIYNTTISYDQQEALPNYRIIYLDFGMM 329

Query: 493 AELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVD---EAFAFWG 549
             LS     ++      +   D R   +  L +  +    +  AF +E+    + +   G
Sbjct: 330 GRLSPAMANSIANIVITINTEDTRKIGKAVLNVCNRTGEVDENAFYKELGAFIQPYFSIG 389

Query: 550 TPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQT 609
               D V   + + Q+++  +++ + + G V  ++     LE    KLDP  ++++  Q+
Sbjct: 390 LGNIDFV---KMLYQIVQLCKKNHLQMRGEVTMLIKAFGTLESSVAKLDPEISMLEVAQS 446

Query: 610 L 610
            
Sbjct: 447 F 447


>gi|293379272|ref|ZP_06625418.1| ABC1 family protein [Enterococcus faecium PC4.1]
 gi|292642068|gb|EFF60232.1| ABC1 family protein [Enterococcus faecium PC4.1]
          Length = 582

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 182/419 (43%), Gaps = 41/419 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V +  E  GP FIK GQ  + R DL      +    L    P  +F+  KKTIE      
Sbjct: 36  VKKAFEELGPTFIKIGQMLSVREDLLSSAFTQTFKTLQDSVPSDTFSTVKKTIETELSLS 95

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +S+IFD F ++P AS S+ Q HRA L+    G       V VK++HP + E IR D  + 
Sbjct: 96  VSDIFDDFSKSPFASASMGQAHRAKLK---SGD-----AVVVKIQHPNIAEEIRLDLQLF 147

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A  +   IP    + L   +Q+    ++++++  +E+ +  +F      WK++  PK 
Sbjct: 148 ERAIPLIKYIPETSVVDLKGVLQEVKRSLINEMNFLKESQNGEQFYQKNNGWKEIRSPKI 207

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDE-------LQG--HERLKSALAHIGTHALLKMLLV 450
                   V+V     G+ ++  ++        + G  +++LK  +A +     +K +  
Sbjct: 208 YDAFCSKKVIVMEEMSGKNLNHLMNAENRTETFITGIQNKQLKQEVAKLLVENFMKQVFD 267

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKR---------------LFRSK--------PHVI-F 486
           D F HAD HPGN+L  V  K+   +                 FR+         P+ + +
Sbjct: 268 DGFFHADPHPGNLLFHVLTKEEQTRARRTTETVHEKEFGPFAFRASTSIEDPVAPYTVNY 327

Query: 487 LDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA 546
           +D GM   LS   R  L +   A+  +D     +  LRL +Q+   +   F +E+     
Sbjct: 328 IDFGMMGHLSAGLRQKLTQAVLALYTKDAYRIEKAVLRLCQQEGLFDESRFHQELTSFLE 387

Query: 547 FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            +     D ++  E   Q++    ++ +  D ++  ++     LEG  R LDP  ++M+
Sbjct: 388 QYYDSPIDEINLQEVFAQVVMICHQNNLQFDRDITLLLKAFGTLEGVIRVLDPEVSLME 446


>gi|218289708|ref|ZP_03493916.1| ABC-1 domain protein [Alicyclobacillus acidocaldarius LAA1]
 gi|218240165|gb|EED07349.1| ABC-1 domain protein [Alicyclobacillus acidocaldarius LAA1]
          Length = 562

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 171/384 (44%), Gaps = 23/384 (5%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K GQ A+ R D+FP +L ++L++L    P  +FA  +K +E   G+ L E
Sbjct: 67  VLEKLGPTFVKLGQIASLRADVFPPELIEQLAKLQDDVPPVAFAEVRKIVEDELGQPLDE 126

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
           IF  F+E PV S SI QVHRA L+    G +     VAVKV+ P +   I  D  ++++L
Sbjct: 127 IFRAFDEEPVGSASIGQVHRAELQ---NGDE-----VAVKVQRPDIRRKIEIDLDILMDL 178

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A           +  L   V++F   ++++++   EA +  R          V  P+  +
Sbjct: 179 ARLAERHFEWAAYYELTGVVEEFRHTLLNELNYTVEAHNADRLRRVHEGDSYVRIPEIYW 238

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VL   Y +G    ++ DEL         +A   THA+L  +LV    HAD HPG
Sbjct: 239 EYTTPRVLTMEYVRG-IKLQHRDELIAKGYRTDEIARRVTHAVLTQMLVHGVFHADPHPG 297

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           N+ V                  ++F+D GM   LS   + +L     A+ RRD R     
Sbjct: 298 NLAVLPDHS-------------ILFMDFGMVGRLSADMKQHLAGLVIALMRRDTRAILRV 344

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVC 581
             R+    +  +      +VD     +       +   E + +L     RHRV +  ++ 
Sbjct: 345 LNRMGVVPHDIDEHRLYRDVDHLREKYYEIPLTQISLGEAVSELFAVAYRHRVRIPADLA 404

Query: 582 TVMVTTLVLEGWQRKLDPGYNVMD 605
            V    + +EG    LDP + +++
Sbjct: 405 LVGKALVTIEGVVEGLDPSFRILN 428


>gi|372267825|ref|ZP_09503873.1| 2-polyprenylphenol 6-hydroxylase [Alteromonas sp. S89]
          Length = 533

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 179/395 (45%), Gaps = 24/395 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP ++K+GQ  +TRPDL P D+  +L++L    P        + IE + G  + E
Sbjct: 47  ALEDLGPIYVKFGQLLSTRPDLLPPDMVLELNQLQDNVPPFPIDQCIERIEASLGAPVDE 106

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRY--PGQKVKPIVVAVKVRHPGVGESIRRDFVIIN 340
           +F  F+  P+AS S+AQVH A L+     PGQ      V VKV  PG+ + I++D  ++ 
Sbjct: 107 LFAEFDREPLASASVAQVHGARLKGENGEPGQS-----VVVKVLRPGIDQVIQQDLQLLR 161

Query: 341 LAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A+ I   +P    +R  E V+ +   +  ++DL REAA+ S    NF     +  P+ 
Sbjct: 162 YIARWIERYLPDGPRMRPVEVVEDYRHTIEGELDLVREAANGSELKRNFANSPLLYVPEV 221

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
            +      VLV     G  V+  +++L+        LA  G     K +   NF HADMH
Sbjct: 222 YWDYTRENVLVLERIDGIPVTD-LEQLRAQNTNMELLAERGVEIFFKQVFEHNFFHADMH 280

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGNI V          R    +P  I +D  +   L++ D+  +     A+ RRD R  A
Sbjct: 281 PGNIFV---------SREHPDRPKYIAIDTAIVGSLTREDQYYMARNILAMFRRDYRMVA 331

Query: 520 ECTLRLSKQQNCPNPKAF---IEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
           E  ++    +      AF   I  V E    +  P G++   A  +  L +  +R  + V
Sbjct: 332 ELHVQSGWVRRDTPINAFESAIRAVCE--PIFEKPLGEISF-ARVLISLFQTAQRFEMEV 388

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R+L P  ++  T    L
Sbjct: 389 QPQLVLLQKTLLNIEGLGRQLYPQLDLWKTAHPFL 423


>gi|167585477|ref|ZP_02377865.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           ubonensis Bu]
          Length = 525

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 179/395 (45%), Gaps = 23/395 (5%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE+ GP F+K+GQ  +TR DL   D   +L++L  + P    +     IE+A G  + 
Sbjct: 54  RALESLGPIFVKFGQVLSTRRDLLSVDFANELAKLQDQVPPFDSSVAIGLIEKALGAPVD 113

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
           E+FD FE  PVAS SIAQVH A L+      K     VAVKV  P +   I  D  ++ +
Sbjct: 114 ELFDEFEREPVASASIAQVHFAKLKQGVHAGK----AVAVKVLRPNMLPVIDSDLALMRD 169

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           +A     +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  
Sbjct: 170 IATWTERMWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMF 229

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +      VLV     G  +S+ V+ L+        LA  G       +  D F HADMHP
Sbjct: 230 WDFSTSTVLVMERMSGVPISQ-VETLRTAGVDIKKLAREGVEIFFTQVFRDGFFHADMHP 288

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V +  K   +          I LD G+   LS  D+  L + F A  +RD    A 
Sbjct: 289 GNIQVSLDPKTFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA- 338

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNV 576
            TL L      P+ +  +EE++ A      P  D     +   + + +L    RR  V +
Sbjct: 339 -TLHLESGWVPPDTR--VEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEI 395

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 396 QPQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|120556324|ref|YP_960675.1| 2-polyprenylphenol 6-hydroxylase [Marinobacter aquaeolei VT8]
 gi|166231754|sp|A1U669.1|UBIB_MARAV RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|120326173|gb|ABM20488.1| 2-octaprenylphenol hydroxylase [Marinobacter aquaeolei VT8]
          Length = 547

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 178/402 (44%), Gaps = 31/402 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+ + L +L  + P       +  IE++ G  +SE
Sbjct: 58  ALEELGPVFVKFGQILSTRRDLLPDDMAESLKQLQDRVPPFPSEQARGIIEKSLGAPVSE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL- 341
           +F  F   P+AS S+AQVH A+L     GQK     V VKV  PG+ + IR+D  ++ L 
Sbjct: 118 LFAEFSPDPMASASVAQVHAATLP---NGQK-----VVVKVLRPGIEKVIRQDLGLMYLM 169

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +       K L   E V  +   +  ++DL REAA+ S+   NF     +  P   +
Sbjct: 170 AGLLEKYWSEGKRLHPVEVVADYDSTIHDELDLQREAANASQLRRNFENSPLIYIPFIDW 229

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                +VLV     G  ++  V  L+        LA  G       +  D+F HADMHPG
Sbjct: 230 DYTRKSVLVMERIHGIPIAD-VPALEKAGVNMRVLAEKGVEIFFTQVFRDSFFHADMHPG 288

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V V+           + P  I +D G+   L+  D+  L     A  RRD R  A+ 
Sbjct: 289 NIFVDVSNP---------ADPKYIAIDFGIVGTLAPDDQSYLARNLLAFFRRDYRQVAQ- 338

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
              L  Q     P+  + E + A        +  P  D+      + +L +  RR  + V
Sbjct: 339 ---LHIQSGWVPPETRVNEFEAAIRTVCEPIFERPLKDISF-GHFLLRLFQTARRFNMEV 394

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAK 618
              +  +  T L +EG  R+L P  ++  T Q  L   DW +
Sbjct: 395 QPQLVLLQKTLLNVEGLGRQLYPDLDLWSTAQPFL--EDWMR 434


>gi|288942667|ref|YP_003444907.1| 2-polyprenylphenol 6-hydroxylase [Allochromatium vinosum DSM 180]
 gi|288898039|gb|ADC63875.1| 2-polyprenylphenol 6-hydroxylase [Allochromatium vinosum DSM 180]
          Length = 547

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 177/389 (45%), Gaps = 31/389 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P DL  +L++L  + P    A  +  IE+A+GR + E
Sbjct: 61  VLEDLGPIFVKFGQILSTRRDLLPDDLAVELAKLQDRVPPFDGAAARALIEKAWGRPIEE 120

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           + D F+  P+AS SIAQVH A L+            V VKV  PG+  +IR+D  ++   
Sbjct: 121 VLDQFDPVPLASASIAQVHTARLK--------DGTEVVVKVLRPGIERTIRQDLGLMYAV 172

Query: 343 AKIS-SVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A ++       + LR  E V+++   +  ++DL REAA+ S+   N+   + +  P+  +
Sbjct: 173 AHLAHKYWKDGRRLRPIEVVREYEKTIYDELDLQREAANASQIRRNWLGSEMLYIPEIYW 232

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P V+V     G  V   V++L+        L   G       +  DNF HADMHPG
Sbjct: 233 DWTRPNVMVMERIYGTPVGE-VEKLKAQGVSMKQLGERGVEIFFTQVFRDNFFHADMHPG 291

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V  + +              I +D G+   L+  D+  L E   A   RD R  AE 
Sbjct: 292 NIFVEPSGR-------------YISIDFGIVGTLTTEDQRYLAENLLAFFERDYRRVAE- 337

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTP--EGDL--VHPAECMQQLLEKVRRHRVNVD 577
              L  +     P   ++E + A      P  E  L  +     + +L +  RR  + + 
Sbjct: 338 ---LHVESGWVPPGTRVDEFEAAIRTVSEPIFEKPLSEISFGHFLVRLFQTARRFDMEIQ 394

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
             +  +  T L +EG  R+L P  ++  T
Sbjct: 395 PQLVLLEKTLLNIEGLGRQLYPELDLWTT 423


>gi|213691152|ref|YP_002321738.1| ABC-1 domain-containing protein [Bifidobacterium longum subsp.
           infantis ATCC 15697 = JCM 1222]
 gi|384198258|ref|YP_005584001.1| hypothetical protein [Bifidobacterium longum subsp. infantis ATCC
           15697 = JCM 1222]
 gi|213522613|gb|ACJ51360.1| ABC-1 domain protein [Bifidobacterium longum subsp. infantis ATCC
           15697 = JCM 1222]
 gi|320457210|dbj|BAJ67831.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 15697 = JCM 1222]
          Length = 606

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 178/388 (45%), Gaps = 31/388 (7%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  GP F+K GQ  + R ++ P+  C +L++L + A    ++     +   +GR   E+F
Sbjct: 111 EALGPTFVKVGQILSMRSEILPQSFCDELAKLRADADPMPYSTVLDVLAAEYGRPADEVF 170

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
              +  P+ S S+AQVHRA+L+    G+      VA+KV+ PGV E + +D  I+   AK
Sbjct: 171 AHIDPKPLGSASLAQVHRATLK---TGED-----VAIKVQRPGVREIMAQDVSIMRSIAK 222

Query: 345 ISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            ++ VI   + + L   V++      S+ D   EA +L+ F     R+K +  P     L
Sbjct: 223 AATKVIRTSQIVDLKGVVEELWDTFESETDFLIEARNLAEFKRFAARFKYMDCPTVYAEL 282

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL---LKMLLVDNFIHADMHP 460
               V+V  Y  G  VS     +     LK     IGT  +      +L D F HAD HP
Sbjct: 283 CTEHVVVMEYIDGISVSHPGQLIDAGYDLK----EIGTKLVDNYATQILDDGFFHADPHP 338

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNIL+R  Q              ++ +D+GMT  L +  R  L E   AVA++D    AE
Sbjct: 339 GNILIRGGQ--------------IVLIDLGMTGRLDQRTRAVLKEMIFAVAKQDSPALAE 384

Query: 521 CTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
             LR +  +  P    A + ++D     +GT +   +  A  +  L +   RH + V   
Sbjct: 385 GLLRFAGTEADPEDYPALLADLDVIVKEFGTVDLAELDIAAFLTALTQMAGRHNIEVPST 444

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
           V TV    + LEG   +  P  N+++ +
Sbjct: 445 VTTVGRALVTLEGLLDEFIPDVNMIEII 472


>gi|20807646|ref|NP_622817.1| protein kinase [Thermoanaerobacter tengcongensis MB4]
 gi|20516191|gb|AAM24421.1| predicted unusual protein kinase [Thermoanaerobacter tengcongensis
           MB4]
          Length = 555

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 179/388 (46%), Gaps = 30/388 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           TLE  GP FIK GQ  +TR DL P D+  +LS+L  +     F   KK +E   G  + E
Sbjct: 61  TLEELGPTFIKLGQLISTRADLIPHDILIELSKLQDEVAPEEFESIKKVLESELGGNIEE 120

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
            F  FEE P+AS SI QV+RA  +    G+      V VKV+ P V + I  D VI+   
Sbjct: 121 FFSYFEEKPLASASIGQVYRARTK---EGKD-----VVVKVQRPEVDKKIHADVVILKNI 172

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           A+I +       +   E V++    +++++D  +E  +  RF  NF+    +  P+  + 
Sbjct: 173 ARILNERIVDSPVDFVEIVEELTDSLLNELDYTQEGNNADRFRENFKNQDYIYIPEVYWD 232

Query: 403 LVHPAVLVETYEQGECV-SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                VL   Y  G  V ++ +   +G++ LK  +A  G  ++   +      H D+HPG
Sbjct: 233 YTTKRVLTMEYIDGISVKNKEILREKGYD-LKR-IARNGAWSIFLQVYKYGLFHGDLHPG 290

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NIL+    K S             ++D G+   L K+ R  L+E FKA A  D     E 
Sbjct: 291 NILITKEGKIS-------------YIDFGIVGYLDKSSREVLIELFKAFAENDTEEVIEI 337

Query: 522 TLRLS---KQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
              +       N  N KA +  +     F+ TP  + ++  + M++++  V ++++ +  
Sbjct: 338 LSDIGAIRADTNLRNLKADLGRI--INYFYTTPLKN-INVNDSMRRIMGVVYKYKLMLPP 394

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
               ++     +EG  R LDP +++ D 
Sbjct: 395 GFTLLLKALATVEGVGRDLDPDFSISDV 422


>gi|410634340|ref|ZP_11344977.1| probable ubiquinone biosynthesis protein ubiB [Glaciecola arctica
           BSs20135]
 gi|410146196|dbj|GAC21844.1| probable ubiquinone biosynthesis protein ubiB [Glaciecola arctica
           BSs20135]
          Length = 528

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 182/401 (45%), Gaps = 27/401 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSE 282
           L+T GP FIK+GQ  +TR DL P D+  +LS L  +         K+ I +A G   LSE
Sbjct: 45  LQTLGPVFIKFGQMLSTRKDLLPPDVATELSILQDQVEPFDSELAKQIIRQALGLTDLSE 104

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  FE  P+AS SIAQVH A L+    G +     V VKV  P +  +I  D  ++  A
Sbjct: 105 VFSEFETKPLASASIAQVHAAKLK---NGNQ----DVIVKVIRPNIKHTIESDIELMRTA 157

Query: 343 AK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +  ++P  K LR  E V+++   ++ ++DL  EA +  +F  NF     +  P    
Sbjct: 158 ANALQKLLPDGKRLRPVEVVKEYERTIIDELDLTHEAENGIQFKRNFESSTALYVPTIYS 217

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
              H  V+V     G  ++  V++L         LA  G       +  D+F HADMHPG
Sbjct: 218 EYSHKNVMVMERIYGTPIAD-VEQLVARNTNMKRLAERGVEVFFTQVFRDSFFHADMHPG 276

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V  A           + P  I +D G+   L+  D+  L E F A   R+ R  A+ 
Sbjct: 277 NIFVSTANP---------NDPQYITIDFGIVGTLNSEDKRYLAENFIAFFNRNYRKVAQL 327

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +    +  + +A I +V E    +  P  + +  +  + QL    RR  + +  
Sbjct: 328 HVDSGWVPSDTDIDDFEASIRKVCE--PIFQKPLAE-IEFSNVLLQLFNTARRFNMVIQP 384

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
            +  +  T L +EG  R+L P  ++  T +  L   +W K 
Sbjct: 385 QLVLLQKTLLYIEGLGRQLYPQLDLWKTAKPFL--ENWMKE 423


>gi|91781798|ref|YP_557004.1| ubiquinone biosynthesis protein UbiB [Burkholderia xenovorans
           LB400]
 gi|123063218|sp|Q145N7.1|UBIB_BURXL RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|91685752|gb|ABE28952.1| 2-octaprenylphenol hydroxylase [Burkholderia xenovorans LB400]
          Length = 525

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 180/393 (45%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL P D+  +L++L  + P    A     +E++ G  +  +
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLPVDIANELAKLQDQVPPFDSAVAIGLVEKSLGAPVDVL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           FD FE  PVAS SIAQVH A+++    GQ      VAVKV  P +   I  D  ++ ++A
Sbjct: 116 FDDFERVPVASASIAQVHFATVK---AGQHAGK-AVAVKVLRPNMLPVIDSDLALLRDIA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                +    K L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 172 VWAERLWADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMYWE 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
              P VLV     G  +S+ V+ L+        LA  G       +  D F HADMHPGN
Sbjct: 232 FCTPTVLVMERMVGVPISQ-VETLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +      +          I LD G+   LS  D+  L + F A  +RD    A  T
Sbjct: 291 IQVSLDPAHFGR---------YIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVA--T 339

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
           L L      P  +  +EE++ A      P  D     +   + + +L    RR  V +  
Sbjct: 340 LHLESGWVPPTTR--VEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 398 QLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|423074540|ref|ZP_17063266.1| ABC1 family protein [Desulfitobacterium hafniense DP7]
 gi|361854588|gb|EHL06647.1| ABC1 family protein [Desulfitobacterium hafniense DP7]
          Length = 558

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 172/388 (44%), Gaps = 31/388 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP ++K GQ A+TRPD+ P  L  +L +L  + P  SFA   + IE   G    +
Sbjct: 62  ALEELGPTYVKIGQIASTRPDIIPDYLITELEKLQDQVPPFSFAEVSQIIEAELGALPQD 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
           IF  FEE P+A+ SI QVHRA L+    G+      VAVK++ P + + I  D  ++++L
Sbjct: 122 IFRHFEEVPLAAASIGQVHRAVLQ---SGES-----VAVKIQRPHIAQKIETDLEILLDL 173

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA     +       + + V++FA  + ++++   E  +  R    F+    +  PK   
Sbjct: 174 AALAEKRMDWAALYHVRDMVEEFANSLRNELNYEIEGNNAQRIRKQFQGDSSIHIPKVYK 233

Query: 402 PLVHPAVLVETYEQGECVSRYVD-ELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                 VL   Y QG  +S++   E  G+ R    LA     A+ K +L++ F H D HP
Sbjct: 234 EYSTKKVLTLEYIQGVKLSQFQTLEALGYNR--KELAENLIKAMFKQILIEGFFHGDPHP 291

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V   Q  S              +D GM   LS   + +       + RR      E
Sbjct: 292 GNIFVLPKQVIS-------------LIDFGMIGRLSSDMKDHFASLVIGMMRRKTEDMVE 338

Query: 521 CTLRLSKQQNCPNPKAFIEEVD---EAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
               +       +PK    +VD   E +      E DL      +  L +   +HR+ + 
Sbjct: 339 AVFAMGIVPEDLDPKVLYRDVDGLREKYLDVPMSEVDL---GSAVNDLFKVAYKHRIIIP 395

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            ++  +  + L LEG   +LDP  +++D
Sbjct: 396 ADLVLLGKSLLSLEGIVEQLDPEISIID 423


>gi|289578223|ref|YP_003476850.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter italicus Ab9]
 gi|297544504|ref|YP_003676806.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|289527936|gb|ADD02288.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter italicus Ab9]
 gi|296842279|gb|ADH60795.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 555

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 186/404 (46%), Gaps = 27/404 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           +TLE  GP FIK GQ  +TR DL P D+  +L++L  +     F   K  +E     ++S
Sbjct: 60  KTLEELGPTFIKMGQLLSTRGDLIPHDILLELAKLQDEVEPEDFIAIKNILESELKGKIS 119

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           + F  F+E P+AS SI QV+RA ++    G+      V VKV+ P V + I  D +I+  
Sbjct: 120 DFFIYFDETPIASASIGQVYRAKIK---EGKD-----VVVKVQRPEVSQKINADIIILKS 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
            AKI +       L   E V + A  + +++D  +E  +  RF  NF +   +  PK  +
Sbjct: 172 IAKILNERIVDSPLDFVEIVDELAESLFNELDYTQEGNNAERFRENFEKENYIYIPKVYW 231

Query: 402 PLVHPAVLVETYEQGECV-SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                 VL   Y +G  V +R +   +G +  K  +A  G  A+   +      H D HP
Sbjct: 232 EYTTKRVLTMEYVEGISVKNRDLLVKKGFDLKK--VARDGAWAIFLQVYEFGLFHGDPHP 289

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNIL+    K S             ++D G+   L K+ R  ++E F+A A  D     E
Sbjct: 290 GNILITNDGKIS-------------YIDFGIVGYLDKSSREMIIELFRAFAENDIEEVVE 336

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
               +   +   N +    +++     F+ TP  + +   + M++++  V +H++ +   
Sbjct: 337 ILSDVGAIRPSTNIRTLKSDLNHIINYFYSTPLKN-ISVNDSMRKIMTTVYKHKLILPPE 395

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYT 623
              ++ +   +EG  R LDP +++    +   +K  + +++S T
Sbjct: 396 FTLLLKSLATVEGVGRSLDPDFSISSVAKD-FIKEVYLRNISLT 438


>gi|89894828|ref|YP_518315.1| hypothetical protein DSY2082 [Desulfitobacterium hafniense Y51]
 gi|89334276|dbj|BAE83871.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 558

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 172/388 (44%), Gaps = 31/388 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP ++K GQ A+TRPD+ P  L  +L +L  + P  SFA   + IE   G    +
Sbjct: 62  ALEELGPTYVKIGQIASTRPDIIPDYLITELEKLQDQVPPFSFAEVSQIIEAELGALPQD 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
           IF  FEE P+A+ SI QVHRA L+    G+      VAVK++ P + + I  D  ++++L
Sbjct: 122 IFRHFEEVPLAAASIGQVHRAVLQ---SGES-----VAVKIQRPHIAQKIETDLEILLDL 173

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA     +       + + V++FA  + ++++   E  +  R    F+    +  PK   
Sbjct: 174 AALAEKRMDWAALYHVRDMVEEFANSLRNELNYEIEGNNAQRIRKQFQGDSSIHIPKVYK 233

Query: 402 PLVHPAVLVETYEQGECVSRYVD-ELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                 VL   Y QG  +S++   E  G+ R    LA     A+ K +L++ F H D HP
Sbjct: 234 EYSTKKVLTLEYIQGVKLSQFQTLEALGYNR--KELAENLIKAMFKQILIEGFFHGDPHP 291

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V   Q  S              +D GM   LS   + +       + RR      E
Sbjct: 292 GNIFVLPKQVIS-------------LIDFGMIGRLSSDMKDHFASLVIGMMRRKTEDMVE 338

Query: 521 CTLRLSKQQNCPNPKAFIEEVD---EAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
               +       +PK    +VD   E +      E DL      +  L +   +HR+ + 
Sbjct: 339 AVFAMGIVPEDLDPKVLYRDVDGLREKYLDVPMSEVDL---GSAVNDLFKVAYKHRIIIP 395

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            ++  +  + L LEG   +LDP  +++D
Sbjct: 396 ADLVLLGKSLLSLEGIVEQLDPEISIID 423


>gi|149194464|ref|ZP_01871561.1| ubiquinone biosynthesis protein AarF, putative [Caminibacter
           mediatlanticus TB-2]
 gi|149135639|gb|EDM24118.1| ubiquinone biosynthesis protein AarF, putative [Caminibacter
           mediatlanticus TB-2]
          Length = 538

 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 184/400 (46%), Gaps = 25/400 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + +E  GP FIK  Q  + RPDL P +L K+L  L       SF   KK +E  F +   
Sbjct: 50  KAIEELGPTFIKLAQVLSLRPDLIPLELAKELENLQDNVSPLSFDVMKKVLEEEFEKPFE 109

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
            IF+  +   +AS SI QV++A L+    G      VVAVK+  P + E I  D VI+  
Sbjct: 110 NIFEK-DFTLLASASIGQVYKAKLK---CGD-----VVAVKILKPNIEEKIYADIVIMLR 160

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
            AK+      +  + L + V++FA  +  ++D   EA +L RF  NF+  +++  PK   
Sbjct: 161 LAKLLRERFLIYGIDLVKIVEEFAKTIKKELDFNIEALNLKRFAANFKNNQNIKVPKLYK 220

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   Y  G  +S  ++EL+        +   G   + + + V  F HAD HPG
Sbjct: 221 NYSTRRVLTMEYINGIKISN-IEELKKTGYDLKEITKKGFDLICEQIFVHRFFHADPHPG 279

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           N++V              S   ++FLD G+   LS+ D+ N +E    V +     AA  
Sbjct: 280 NLMV--------------SDGKIVFLDFGIMGRLSEEDQKNFIELIYYVIKNKEEKAALY 325

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVC 581
            L+LSK     +  +F +E+ +  + +       V     +  +L  + R+++    +  
Sbjct: 326 VLKLSKVLGEVDISSFKKEMADIISTYFYSSLKEVELRSLIDDMLRVMSRYKIYFKEDNY 385

Query: 582 TVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLS 621
            +  + + +EG  ++L P +N  + ++  ++K  + K LS
Sbjct: 386 LLAKSLVTMEGVGKRLYPEFNAAEEIKPFIIKL-YKKRLS 424


>gi|394989801|ref|ZP_10382634.1| ubiquinone biosynthesis protein UbiB [Sulfuricella denitrificans
           skB26]
 gi|393791301|dbj|GAB72273.1| ubiquinone biosynthesis protein UbiB [Sulfuricella denitrificans
           skB26]
          Length = 514

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 181/390 (46%), Gaps = 31/390 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P  +       IE+A+G+   
Sbjct: 54  QALEALGPIFVKFGQVLSTRRDLIPADIADELARLQDRVPPFAPEIALAAIEKAYGKPAG 113

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           E+F  F+  PVAS S+AQVH A L+    G++      AVK+  P +   I  D  ++  
Sbjct: 114 EVFAEFDPVPVASASVAQVHFARLK---DGRE-----AAVKILRPAIAHVIAHDVALLYA 165

Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
            A  + S+    K LR  E V +F   +  ++DL REAA+ S+   NF+    +  P+  
Sbjct: 166 GASLVESLWEDGKRLRPREVVAEFEKHLEDELDLMREAANGSQLRRNFQDSDLLLVPEIY 225

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +   H +V+V     G  +S+ VD L+        LA  G       +  D F HADMHP
Sbjct: 226 WDWCHTSVMVMERMAGTPISQ-VDALRAQGIDIPKLAREGVTIFFTQVFRDGFFHADMHP 284

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNILV      S   R        I LD G+ + L+ +D+  L + F A  +RD +  A 
Sbjct: 285 GNILV------SPDGR-------YIALDFGIMSTLTDSDKNYLAQNFLAFFKRDYKRVAL 331

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNV 576
             +    +     P+  ++E + A      P  D     +     + +L +  RR  V +
Sbjct: 332 AHI----ESGWAPPQTRVDEFEAAIRAVCEPIFDRPLKEISFGRFLLRLFQTSRRFGVVI 387

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
              +  +  T L +EG  R+LDP  ++  T
Sbjct: 388 QPQLVMLQKTFLNIEGLGRQLDPDLDLWQT 417


>gi|20808256|ref|NP_623427.1| protein kinase [Thermoanaerobacter tengcongensis MB4]
 gi|20516855|gb|AAM25031.1| predicted unusual protein kinase [Thermoanaerobacter tengcongensis
           MB4]
          Length = 558

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 174/386 (45%), Gaps = 27/386 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK GQ  +TR D+ P+D+ K+L +L  KAP  SF   K  I+  FG  L E 
Sbjct: 60  LEELGPTFIKMGQILSTRSDILPKDIIKELEKLQDKAPAFSFDEVKSVIQNEFGESLEEA 119

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           +  FE  P+A+ SIAQVH+A L   + G+      V VKV+ PG+ + I +D  I+   A
Sbjct: 120 YAEFEPTPLAAASIAQVHKALL---WSGK-----TVVVKVQRPGIEKIIAQDMRILEDIA 171

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           K + +     K     + V+ F   +  ++D   E  +  +F  NF + K V  P  ++ 
Sbjct: 172 KFVDNHTKYGKIYNFTKMVEDFKKRLEEELDFRIEGENAEKFKKNFLKDKKVKIPSIIWT 231

Query: 403 LVHPAVLVETYEQGECVSRY--VDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                VL   Y  G  ++ +  +DE  G +R   A+A     ++L  +L D F H D HP
Sbjct: 232 HTTRRVLTMEYIGGIPLNDFNAIDE-AGLDR--GAIARNLAKSVLNQILRDGFFHGDPHP 288

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI+V                  + FLD GM   LS   +    +    +  ++ R   E
Sbjct: 289 GNIMV-------------LEDGTIAFLDFGMVGSLSPERKRQFSKMLLGIVYKNSRMIIE 335

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
             + L+      N K   ++++     +     + +   E +  + + V  + + +    
Sbjct: 336 SIIDLNAVTLNVNMKKLEKDINNLRDRYVEIPLEKLKVGEVLNGIFDLVFSYNIVIPNEF 395

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDT 606
             +  + + LEG   KLDP  +V++ 
Sbjct: 396 NMLAKSLITLEGIVEKLDPKISVLEV 421


>gi|385206969|ref|ZP_10033837.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia sp. Ch1-1]
 gi|385179307|gb|EIF28583.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia sp. Ch1-1]
          Length = 525

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 180/393 (45%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL P D+  +L++L  + P    A     +E++ G  +  +
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLPVDIANELAKLQDQVPPFDSAVAIGLVEKSLGAPVDVL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           FD FE  PVAS SIAQVH A+++    GQ      VAVKV  P +   I  D  ++ ++A
Sbjct: 116 FDDFERVPVASASIAQVHFATVK---AGQHAGK-AVAVKVLRPNMLPVIDSDLALLRDIA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                +    K L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 172 VWAERLWADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMYWE 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
              P VLV     G  +S+ V+ L+        LA  G       +  D F HADMHPGN
Sbjct: 232 FCTPTVLVMERMVGVPISQ-VETLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +      +          I LD G+   LS  D+  L + F A  +RD    A  T
Sbjct: 291 IQVSLDPAHFGR---------YIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVA--T 339

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
           L L      P  +  +EE++ A      P  D     +   + + +L    RR  V +  
Sbjct: 340 LHLESGWVPPTTR--VEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 398 QLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|298369693|ref|ZP_06981010.1| ubiquinone biosynthesis protein AarF [Neisseria sp. oral taxon 014
           str. F0314]
 gi|298282250|gb|EFI23738.1| ubiquinone biosynthesis protein AarF [Neisseria sp. oral taxon 014
           str. F0314]
          Length = 547

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 175/376 (46%), Gaps = 26/376 (6%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  GP F+K GQ  +TR D+F  +  ++  +L S       A   + IE   GR + E+F
Sbjct: 62  EELGPTFVKLGQILSTRVDIFDAEWIEEFEKLQSNVAPIPVASIDELIESYLGRPMGEVF 121

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLAA 343
             F+  PV S SIAQVH+A L     G+      VAVK++ P +   I+ D  ++ +LA 
Sbjct: 122 RSFDSVPVGSASIAQVHKAVLS---DGE-----TVAVKIKRPDIEPVIQADLRILTHLAG 173

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            I S IP V+  +  + VQ FA  +  + DL+ E  ++ RF   F     V  P+ VYP 
Sbjct: 174 LIESEIPEVRRYQPVQMVQYFARSLAKETDLSVELRYMQRFGQTFDSDPFVRIPR-VYPD 232

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
           +    ++     G+ + + +        +++ LA   T  L  M+L   F HAD HPGNI
Sbjct: 233 ISNRQILVQEHIGDTLLKDIRIETLDAPMRTQLAARITDTLFTMILQQGFFHADPHPGNI 292

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
            +              S   +  +D G+   LS T R  +V+   A+ R+D  T  +  L
Sbjct: 293 FI-------------GSDGRITLIDFGLVGHLSSTRRREIVDLINALTRKDQFT-MQYVL 338

Query: 524 RLSKQQNCPNPKAFIEEVDEA-FAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCT 582
               Q + P+      +V E    +  TP  DL   ++ +  + + +R H + + G++  
Sbjct: 339 SNWAQGDLPDENLLGADVLEMLLNYEHTPVRDL-RISQVINDITQIMRNHGLTLPGDLVM 397

Query: 583 VMVTTLVLEGWQRKLD 598
           +  T + LEG  ++LD
Sbjct: 398 LFKTLITLEGVAKRLD 413


>gi|387815682|ref|YP_005431174.1| 2-octaprenylphenol hydroxylase [Marinobacter hydrocarbonoclasticus
           ATCC 49840]
 gi|381340704|emb|CCG96751.1| 2-octaprenylphenol hydroxylase [Marinobacter hydrocarbonoclasticus
           ATCC 49840]
          Length = 547

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 177/402 (44%), Gaps = 31/402 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+ + L +L  + P       +  IE++    +SE
Sbjct: 58  ALEELGPVFVKFGQILSTRRDLLPDDMAESLKQLQDRVPPFPSEQARGIIEKSLAAPVSE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL- 341
           +F  F   P+AS S+AQVH A+L     GQK     V VKV  PG+ + IR+D  ++ L 
Sbjct: 118 LFAEFSPDPMASASVAQVHAATLPN---GQK-----VVVKVLRPGIEKVIRQDLGLMYLM 169

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +       K L   E V  +   +  ++DL REAA+ S+   NF     +  P   +
Sbjct: 170 AGLLEKYWSEGKRLHPVEVVADYDATIHDELDLQREAANASQLRRNFENSPLIYIPSIDW 229

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                +VLV     G  ++  V  L+        LA  G       +  D+F HADMHPG
Sbjct: 230 DYTRKSVLVMERIHGIPIAD-VPALEKAGVNMKVLAEKGVEIFFTQVFRDSFFHADMHPG 288

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V V+           + P  I +D G+   L+  D+  L     A  RRD R  A+ 
Sbjct: 289 NIFVDVSNP---------ADPKYIAIDFGIVGTLAPDDQSYLARNLLAFFRRDYRQVAQ- 338

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
              L  Q     P+  + E + A        +  P  D+      + +L +  RR  + V
Sbjct: 339 ---LHIQSGWVPPETRVNEFEAAIRTVCEPIFERPLKDISF-GHFLLRLFQTARRFNMEV 394

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAK 618
              +  +  T L +EG  R+L P  ++  T Q  L   DW +
Sbjct: 395 QPQLVLLQKTLLNVEGLGRQLYPDLDLWSTAQPFL--EDWMR 434


>gi|212213479|ref|YP_002304415.1| 2-polyprenylphenol 6-hydroxylase accessory protein [Coxiella
           burnetii CbuG_Q212]
 gi|212011889|gb|ACJ19270.1| 2-polyprenylphenol 6-hydroxylase accessory protein [Coxiella
           burnetii CbuG_Q212]
          Length = 541

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 147/298 (49%), Gaps = 19/298 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+ ++L +L  + P       K  IE++ G+ + +
Sbjct: 59  VLEELGPIFVKFGQLLSTRRDLLPDDIAEELEKLQDRVPPFPGKIAKAMIEKSCGKTIED 118

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
            F  F+E P+AS SIAQVH A+L             V +KV  P + ++I+RD  ++ L 
Sbjct: 119 CFATFDETPLASASIAQVHAATLH--------DSSEVIIKVLRPNIAKTIQRDIALMYLG 170

Query: 343 AKISSVI-PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AK++       K L+  E V +F   +  ++DL REAA+ S+   NF   + +  PK  +
Sbjct: 171 AKLARRFWRHGKRLKPVEVVAEFEHTIYHELDLMREAANASQLRRNFADSEKMYVPKIYW 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
             VH  V+V     G  +S   +    +  LK  LA  G       +L D+F HADMHPG
Sbjct: 231 DYVHRDVMVMERIYGIRISNIAELKAANTNLKK-LAEYGVEIFFTQVLRDSFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           N+ V V   ++         P  + +D G+   LS  D+  + E   A  +RD R  A
Sbjct: 290 NLFVDVTDPEN---------PKYLGVDFGIMGALSPQDQRYIAENLLAFFKRDYRQVA 338


>gi|29655301|ref|NP_820993.1| 2-polyprenylphenol 6-hydroxylase [Coxiella burnetii RSA 493]
 gi|29542573|gb|AAO91507.1| 2-polyprenylphenol 6-hydroxylase accessory protein [Coxiella
           burnetii RSA 493]
          Length = 541

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 147/298 (49%), Gaps = 19/298 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+ ++L +L  + P       K  IE++ G+ + +
Sbjct: 59  VLEELGPIFVKFGQLLSTRRDLLPDDIAEELEKLQDRVPPFPGKIAKAMIEKSCGKTIED 118

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
            F  F+E P+AS SIAQVH A+L             V +KV  P + ++I+RD  ++ L 
Sbjct: 119 CFATFDETPLASASIAQVHAATLH--------DSSEVIIKVLRPNIAKTIQRDIALMYLG 170

Query: 343 AKISSVI-PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AK++       K L+  E V +F   +  ++DL REAA+ S+   NF   + +  PK  +
Sbjct: 171 AKLARRFWRHGKRLKPVEVVAEFEHTIYHELDLMREAANASQLRRNFADSEKMYVPKIYW 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
             VH  V+V     G  +S   +    +  LK  LA  G       +L D+F HADMHPG
Sbjct: 231 DYVHRDVMVMERIYGIRISNIAELKAANTNLKK-LAEYGVEIFFTQVLRDSFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           N+ V V   ++         P  + +D G+   LS  D+  + E   A  +RD R  A
Sbjct: 290 NLFVDVTDPEN---------PKYLGVDFGIMGALSPQDQRYIAENLLAFFKRDYRQVA 338


>gi|431794175|ref|YP_007221080.1| protein kinase [Desulfitobacterium dichloroeliminans LMG P-21439]
 gi|430784401|gb|AGA69684.1| putative unusual protein kinase [Desulfitobacterium
           dichloroeliminans LMG P-21439]
          Length = 558

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 173/385 (44%), Gaps = 27/385 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP ++K GQ A+TRPDL P  L ++L +L  + P  SFA   + I    G    E+
Sbjct: 63  LEELGPTYVKIGQIASTRPDLIPDYLIRELEKLQDQVPPFSFAEVTQIIREELGAAPQEV 122

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F  FEE P+A+ SI QVH A L+    G+K     VAVKV+ P + ++I  D  I+ +LA
Sbjct: 123 FQHFEERPLAAASIGQVHYAVLK---TGEK-----VAVKVQRPLISDTIETDLEILSDLA 174

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           A     +    +  + + V++FA  + +++D   E ++  R    F     +  P+    
Sbjct: 175 ALAERRMDWAAFYHVRDMVEEFATSLRNELDYEIEGSNAERVGRQFVEDSSIYIPRVYKE 234

Query: 403 LVHPAVLVETYEQGECVSRYVDELQ-GHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                VL   Y QG  +S++ D  + G+ R    LA     A+ K +L++ F H D HPG
Sbjct: 235 YSKKRVLTLEYIQGVKLSQFQDLAELGYNR--KVLAENLIKAMFKQILIEGFFHGDPHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V   Q              +  +D GM   LS   + +       + RR      E 
Sbjct: 293 NIFVLPGQV-------------IALIDFGMIGRLSPDMKDHFASLVIGMMRRKTEDMIEA 339

Query: 522 TLRLSKQQNCPNPKAFIEEVDEA-FAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
              +       + K    +VD     +   P  + VH    +  L +   +HR+ +  ++
Sbjct: 340 VFAMGIVPEDIDRKILFRDVDLLREKYLDVPLSE-VHLGNAVNDLFKVTFKHRIIIPTDL 398

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMD 605
             +  + L LEG   +LDP  +++D
Sbjct: 399 VLLGKSLLSLEGLVEQLDPEISIID 423


>gi|384196435|ref|YP_005582179.1| ABC1 family protein [Bifidobacterium breve ACS-071-V-Sch8b]
 gi|417941730|ref|ZP_12585012.1| Putative ubiquinone biosynthesis protein AarF [Bifidobacterium
           breve CECT 7263]
 gi|333110290|gb|AEF27306.1| ABC1 family protein [Bifidobacterium breve ACS-071-V-Sch8b]
 gi|339478503|gb|ABE94958.1| ABC1 family protein kinase [Bifidobacterium breve UCC2003]
 gi|376167972|gb|EHS86785.1| Putative ubiquinone biosynthesis protein AarF [Bifidobacterium
           breve CECT 7263]
          Length = 606

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 178/388 (45%), Gaps = 31/388 (7%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  GP F+K GQ  + R ++ P+  C +L++L + A    ++     +   +GR   E+F
Sbjct: 111 EALGPTFVKVGQILSMRSEILPQSFCDELAKLRADADPMPYSTVLDVLAAEYGRPADEMF 170

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
              +  P+ S S+AQVHRA+L+    G+      VA+KV+ PGV E + +D  I+   AK
Sbjct: 171 AHIDPKPLGSASLAQVHRATLK---TGED-----VAIKVQRPGVREIMAQDVSIMRSIAK 222

Query: 345 ISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            ++ VI   + + L   V++      S+ D   EA +L+ F     R+K +  P     L
Sbjct: 223 AATKVIRTSQIVDLKGVVEELWDTFESETDFLIEARNLAEFKRFAARFKYMDCPTVYAEL 282

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL---LKMLLVDNFIHADMHP 460
               V+V  Y  G  VS     +     LK     IGT  +      +L D F HAD HP
Sbjct: 283 CTEHVVVMEYIDGISVSHPGQLIDAGYDLK----EIGTKLVDNYATQILDDGFFHADPHP 338

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNIL+R  Q              ++ +D+GMT  L +  R  L E   AVA++D    AE
Sbjct: 339 GNILIRGGQ--------------IVLIDLGMTGRLDQRTRAVLKEMIFAVAKQDSPALAE 384

Query: 521 CTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
             LR +  +  P    A + ++D     +GT +   +  A  +  L +   RH + V   
Sbjct: 385 GLLRFAGTEADPEDYPALLADLDVIVKEFGTVDLAELDIAAFLTALTQMAGRHNIEVPST 444

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
           V TV    + LEG   +  P  N+++ +
Sbjct: 445 VTTVGRALVTLEGLLDEFIPDVNMIEII 472


>gi|254479353|ref|ZP_05092690.1| 2-polyprenylphenol 6-hydroxylase [Carboxydibrachium pacificum DSM
           12653]
 gi|214034719|gb|EEB75456.1| 2-polyprenylphenol 6-hydroxylase [Carboxydibrachium pacificum DSM
           12653]
          Length = 555

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 179/388 (46%), Gaps = 30/388 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           TLE  GP FIK GQ  +TR DL P D+  +LS+L  +     F   KK +E   G  + E
Sbjct: 61  TLEELGPTFIKLGQLISTRADLIPHDILIELSKLQDEVAPEEFESIKKVLESELGGSIEE 120

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
            F  FEE P+AS SI QV+RA  +    G+      V VKV+ P V + I  D VI+   
Sbjct: 121 FFSYFEEKPLASASIGQVYRARTK---EGKD-----VVVKVQRPEVDKKIHADVVILKNI 172

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           A+I +       +   E V++    +++++D  +E  +  RF  NF+    +  P+  + 
Sbjct: 173 ARILNERIVNSPVDFVEIVEELTDSLLNELDYTQEGNNADRFRENFKNQDYIYIPEVYWD 232

Query: 403 LVHPAVLVETYEQGECV-SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                VL   Y  G  V ++ +   +G++ LK  +A  G  ++   +      H D+HPG
Sbjct: 233 YTTKRVLTMEYIDGISVKNKEILREKGYD-LKR-IARNGAWSIFLQVYKYGLFHGDLHPG 290

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NIL+    K S             ++D G+   L K+ R  L+E FKA A  D     E 
Sbjct: 291 NILITKEGKIS-------------YIDFGIVGYLDKSSREVLIELFKAFAENDTEEVIEI 337

Query: 522 TLRLS---KQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
              +       N  N KA +  +     F+ TP  + ++  + M++++  V ++++ +  
Sbjct: 338 LSDIGAIRADTNLRNLKADLGRI--INYFYTTPLKN-INVNDSMRRIMGVVYKYKLMLPP 394

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
               ++     +EG  R LDP +++ D 
Sbjct: 395 GFTLLLKALATVEGVGRDLDPDFSISDV 422


>gi|134096013|ref|YP_001101088.1| 2-octaprenylphenol hydroxylase [Herminiimonas arsenicoxydans]
 gi|133739916|emb|CAL62967.1| 2-polyprenylphenol 6-hydroxylase [Herminiimonas arsenicoxydans]
          Length = 520

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 184/395 (46%), Gaps = 27/395 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P  S       I ++ G    
Sbjct: 56  RALEDLGPIFVKFGQVLSTRRDLMPIDIADELARLQDRVPPFSSELAIAQIIKSLGAHPD 115

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
            +F  FE  PVAS SIAQVH A L+    G+      VAVKV  PGV +SI  D  ++++
Sbjct: 116 VLFAHFEAEPVASASIAQVHFARLK---NGRD-----VAVKVLRPGVRKSIDDDVALMHI 167

Query: 342 AAKISSVIPAV-KWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
            A +   + A  K L+  E V +F  ++  ++DL REAA+ S+   NF   K +  P+  
Sbjct: 168 VAGLVEKLWADGKRLKPKEVVAEFDKYLHDELDLMREAANGSQLRRNFAASKLLVVPEMF 227

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +     +V+V     G  +S+    +     LK  L+  G       +  D F HADMHP
Sbjct: 228 WDYCSTSVIVMERMIGIPISQTDRLIAAGIDLKK-LSRDGVEIFFTQVFRDGFFHADMHP 286

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V VA +   +          I LD G+   L+  D+  L + F A  RRD +  AE
Sbjct: 287 GNIQVSVAPETFGR---------YIALDFGIVGTLNDFDKDYLSQNFLAFFRRDYKRVAE 337

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNV 576
             +    +      +  ++E++ A      P  D     +   + + +L +  RR  V V
Sbjct: 338 AHI----ESGWAPKETRVDELESAVRACCEPIFDRPLSEISFGQVLLRLFQTSRRFNVEV 393

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 394 QPQLVLLQKTLLNVEGLGRQLDPELDLWKTAKPYL 428


>gi|30249821|ref|NP_841891.1| ubiquinone biosynthesis protein UbiB [Nitrosomonas europaea ATCC
           19718]
 gi|30180858|emb|CAD85780.1| ABC1 family [Nitrosomonas europaea ATCC 19718]
          Length = 504

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 179/392 (45%), Gaps = 29/392 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LET GP FIK+GQ  +TR DL  +D  ++L+ L  + P        + +E  +GR + E+
Sbjct: 56  LETLGPIFIKFGQMLSTRRDLLAQDFAEELALLQDRVPPFPSEQAVQILETVYGRPVHEV 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  PVAS S+AQVH A L   + G +      AVK+  P +   I  D  ++   A
Sbjct: 116 FLEFDIKPVASASVAQVHYAVL---HDGTR-----AAVKILRPTIAPVIAHDVALMETGA 167

Query: 344 -KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             + S+ P  K L+L E V +FA  +  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 168 WLLESIWPDGKRLKLREVVAEFARHLGDELDLIREAANCSQLRRNFLDSPLLLVPEVYWD 227

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
             H  V+V     G  +S +V  L+        LA +G       +  D + HADMHPGN
Sbjct: 228 YCHTEVMVMERVVGTPIS-HVASLRTQGIDIPQLARMGVEIFFTQVFRDGYFHADMHPGN 286

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V              S    I +D G+   LS  D+  L + F A  RRD R  A+  
Sbjct: 287 IFV-------------GSDGRYIAVDFGIMGSLSDQDKNYLAQNFLAFFRRDYRRVAQTH 333

Query: 523 LRLS---KQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +      +     + ++ I  V E    +  P  + ++    + +L +  R+  V +   
Sbjct: 334 IEAGWAPRNTRVDDFESAIRAVCE--PIFDRPLKE-IYFGRVLLRLFQASRQFNVEIQPQ 390

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 391 LVLLQKTLLNIEGLGRDLDPDLDLWKTAKPFL 422


>gi|219669267|ref|YP_002459702.1| ABC transporter [Desulfitobacterium hafniense DCB-2]
 gi|219539527|gb|ACL21266.1| ABC-1 domain protein [Desulfitobacterium hafniense DCB-2]
          Length = 558

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 172/388 (44%), Gaps = 31/388 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP ++K GQ A+TRPD+ P  L  +L +L  + P  SFA   + IE   G    +
Sbjct: 62  ALEELGPTYVKIGQIASTRPDIIPDYLITELEKLQDQVPPFSFAEVSQIIEAELGALPQD 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
           IF  FEE P+A+ SI QVHRA L+    G+      VAVK++ P + + I  D  ++++L
Sbjct: 122 IFRHFEEEPLAAASIGQVHRAVLQ---SGES-----VAVKIQRPHIAQKIETDLEILLDL 173

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA     +       + + V++FA  + ++++   E  +  R    F+    +  PK   
Sbjct: 174 AALAEKRMDWAALYHVRDMVEEFANSLRNELNYEIEGNNAQRIRKQFQGDSSIHIPKVYK 233

Query: 402 PLVHPAVLVETYEQGECVSRYVD-ELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                 VL   Y QG  +S++   E  G+ R    LA     A+ K +L++ F H D HP
Sbjct: 234 EYSTKKVLTLEYIQGVKLSQFQTLEALGYNR--KELAENLIKAMFKQILIEGFFHGDPHP 291

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V   Q  S              +D GM   LS   + +       + RR      E
Sbjct: 292 GNIFVLPKQVIS-------------LIDFGMIGRLSSDMKDHFASLVIGMMRRKTEDMVE 338

Query: 521 CTLRLSKQQNCPNPKAFIEEVD---EAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
               +       +PK    +VD   E +      E DL      +  L +   +HR+ + 
Sbjct: 339 AVFAMGIVPEDLDPKVLYRDVDGLREKYLDVPMSEVDL---GSAVNDLFKVAYKHRIIIP 395

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
            ++  +  + L LEG   +LDP  +++D
Sbjct: 396 ADLVLLGKSLLSLEGIVEQLDPEISIID 423


>gi|291455929|ref|ZP_06595319.1| putative ubiquinone biosynthesis protein AarF [Bifidobacterium
           breve DSM 20213 = JCM 1192]
 gi|291382338|gb|EFE89856.1| putative ubiquinone biosynthesis protein AarF [Bifidobacterium
           breve DSM 20213 = JCM 1192]
          Length = 606

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 178/388 (45%), Gaps = 31/388 (7%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  GP F+K GQ  + R ++ P+  C +L++L + A    ++     +   +GR   E+F
Sbjct: 111 EALGPTFVKVGQILSMRSEILPQSFCDELAKLRADADPMPYSTVLDVLAAEYGRPADEMF 170

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
              +  P+ S S+AQVHRA+L+    G+      VA+KV+ PGV E + +D  I+   AK
Sbjct: 171 AHIDPKPLGSASLAQVHRATLK---TGED-----VAIKVQRPGVREIMAQDVSIMRSIAK 222

Query: 345 ISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            ++ VI   + + L   V++      S+ D   EA +L+ F     R+K +  P     L
Sbjct: 223 AATKVIRTSQIVDLKGVVEELWDTFESETDFLIEARNLAEFKRFAARFKYMDCPTVYAEL 282

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL---LKMLLVDNFIHADMHP 460
               V+V  Y  G  VS     +     LK     IGT  +      +L D F HAD HP
Sbjct: 283 CTEHVVVMEYIDGISVSHPGQLIDAGYDLK----EIGTKLVDNYATQILDDGFFHADPHP 338

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNIL+R  Q              ++ +D+GMT  L +  R  L E   AVA++D    AE
Sbjct: 339 GNILIRGGQ--------------IVLIDLGMTGRLDQRTRAVLKEMIFAVAKQDSPALAE 384

Query: 521 CTLRLSKQQNCPNP-KAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
             LR +  +  P    A + ++D     +GT +   +  A  +  L +   RH + V   
Sbjct: 385 GLLRFAGTEADPEDYPALLADLDVIVKEFGTVDLAELDIAAFLTALTQMAGRHNIEVPST 444

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
           V TV    + LEG   +  P  N+++ +
Sbjct: 445 VTTVGRALVTLEGLLDEFIPDVNMIEII 472


>gi|333895269|ref|YP_004469144.1| putative protein kinase [Alteromonas sp. SN2]
 gi|332995287|gb|AEF05342.1| putative protein kinase [Alteromonas sp. SN2]
          Length = 542

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 176/393 (44%), Gaps = 25/393 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSE 282
           L++ GP FIK+GQ  +TR DL    +  +L+ L  K P  S    ++ I+ + G   LSE
Sbjct: 58  LQSLGPVFIKFGQMLSTRRDLLHPAIANELARLQDKVPPFSSEAAQQIIKTSLGLTHLSE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
           +F  F+EAP+AS SIAQVH A L       K     V VKV  P + E+I  D  ++ +L
Sbjct: 118 LFSEFDEAPLASASIAQVHAAKL-------KANNEDVVVKVLRPDIRETIVADMELLFSL 170

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ +   +P  K LR  E V ++   ++ ++DL RE+A   +   NF     +  PK   
Sbjct: 171 ASVLQKWLPDGKRLRPVEVVVEYRKTIVDELDLLRESASGIQLGRNFEGSDSLYIPKIYS 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
              H  V+V     G  +S  +D L         LA  G       +  D+F HADMHPG
Sbjct: 231 DYCHSNVMVMERIYGLPISN-IDALLAQNTNMKKLAERGVEVFFTQVFRDSFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V     ++         P  I +D G+   L++ D+  L E F A   RD R  A+ 
Sbjct: 290 NIFVSTEHPEN---------PKYIAIDFGIVGTLNREDKRYLAENFIAFFNRDYRKVAQL 340

Query: 522 TLRLSKQQNCPNPKAF---IEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
                   N  N   F   I  V E    +  P  ++      + QL    RR  + V  
Sbjct: 341 HADSGWVPNDTNIDEFEMAIRTVCE--PIFQKPLAEISF-GNVLLQLFNTARRFNMVVQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++  T +  L
Sbjct: 398 QLVLLQKTLLYVEGLGRQLYPQLDLWKTAKPFL 430


>gi|22255855|gb|AAM94780.1| CalR3 [Micromonospora echinospora]
          Length = 467

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 180/413 (43%), Gaps = 39/413 (9%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P  R  +   V RT+   GP FIK  Q   TR D+ P  LC +LS L    P    A ++
Sbjct: 81  PAGRRRFAREVARTVARLGPTFIKAAQVLGTRRDVVPALLCDELSMLQDDVPPMDAAQSR 140

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329
             +   +G RL  +F   EE PVASGSIA V+RA+L             VAVK+R PG+G
Sbjct: 141 AALREVYGDRLDTVFASVEETPVASGSIACVYRATL--------PDGATVAVKLRRPGIG 192

Query: 330 ESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFR 389
             +  D  ++   A + + +P  + + + E V      ++ Q+DL RE   L R   +  
Sbjct: 193 PQMAADLGLLRRGASVVARLPMFRGVPVREVVDSLCESVLGQLDLGREGRDLDRLREDLG 252

Query: 390 RWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLL 449
               V  P+       PA +V  +     V       +    ++   A      + +ML 
Sbjct: 253 GVPRVRVPRVHAAASRPAAIVMDFIPDLAVDTGA---RCPRAMRRTFAASTLTVVYQMLF 309

Query: 450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF-- 507
           ++ F+H D+HPGN+              F     V+ LD G + +LS   R    +FF  
Sbjct: 310 INGFVHCDLHPGNL-------------YFTRSGQVVVLDAGFSVQLSDKMRGLFADFFLN 356

Query: 508 KAVARRDGRTAA---ECTLRLSKQQNCPNPKAFIEEVDEAFA---FWGTPEGDLVHPAEC 561
            ++ R D R AA   E  + ++   + P   AF E V +  A        E  L+  A  
Sbjct: 357 MSIGRGD-RCAAIVLESAIGVADDADVP---AFTEGVKDLVARSYRLSAKEFSLIAFA-- 410

Query: 562 MQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
             +L +  RR+ V     +   +++ LV+EG  R LDP  +  +T + +L +A
Sbjct: 411 -GELFDLQRRYGVAASPELVFPLLSLLVVEGTVRSLDPDIDFQETAKPVLNRA 462


>gi|15603553|ref|NP_246627.1| hypothetical protein PM1688 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|14548299|sp|Q9CKD4.1|UBIB_PASMU RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|12722096|gb|AAK03772.1| AarF [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 527

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 177/400 (44%), Gaps = 27/400 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP +IK GQ  +TR DLFP D+  +L+ L  +         +  IE+A G  L   
Sbjct: 61  LQELGPVWIKLGQMLSTRRDLFPPDIADELALLQDQVDPFDGKIARAQIEKALGAPLETW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYP--GQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           FD F E  +AS SIAQVH A  +   P    ++    V +KV  P + + I  D   ++L
Sbjct: 121 FDEFNETALASASIAQVHTAKFKQNAPHLENRLAGKEVVLKVLRPNIQQMINAD---LSL 177

Query: 342 AAKISSVIPAVKW----LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP 397
             K++S IP +K     LR  E V+++   +  ++DL RE A+  +   NF     +  P
Sbjct: 178 MYKVASWIPRIKAEGRRLRPVEVVREYEKNLRDELDLRREMANAIQLRANFENSPMLYIP 237

Query: 398 KPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHAD 457
           +      H  V+V     G  VS  ++EL  +      LA  G       +  D+F HAD
Sbjct: 238 EMYKQFCHQTVIVMERIYGIPVSN-IEELHANGTNMKLLAERGVQVFFTQVFRDSFFHAD 296

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
           MHPGNI V  A             P  I +D G+   L+  D+  L E F A   RD R 
Sbjct: 297 MHPGNIFVNRAHP---------DDPQYIGIDCGIVGRLNDHDKRYLAESFVAFFNRDYRR 347

Query: 518 AAECTLR---LSKQQNCPN-PKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
            AE  +      K  N  +  +AF E  +  FA    P  ++      +  L    R + 
Sbjct: 348 VAEMHVASGWTPKDTNIDDFEQAFREVCEPIFA---KPLSEISF-GHVLLNLFNVAREYN 403

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           + V   +  +  T L +EG  R+L P  ++ DT +  L K
Sbjct: 404 MEVQPQLVLLQKTLLYIEGLGRQLYPQLDLWDTAKPFLQK 443


>gi|161830271|ref|YP_001595958.1| 2-polyprenylphenol 6-hydroxylase [Coxiella burnetii RSA 331]
 gi|161762138|gb|ABX77780.1| 2-polyprenylphenol 6-hydroxylase [Coxiella burnetii RSA 331]
          Length = 541

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 147/298 (49%), Gaps = 19/298 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+ ++L +L  + P       K  IE++ G+ + +
Sbjct: 59  VLEELGPIFVKFGQLLSTRRDLLPDDIAEELEKLQDRVPPFPGKIAKAMIEKSCGKTIED 118

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
            F  F+E P+AS SIAQVH A+L             V +KV  P + ++I+RD  ++ L 
Sbjct: 119 CFATFDETPLASASIAQVHAATLH--------DSSEVIIKVLRPNIAKTIQRDIALMYLG 170

Query: 343 AKISSVI-PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AK++       K L+  E V +F   +  ++DL REAA+ S+   NF   + +  PK  +
Sbjct: 171 AKLARRFWRHGKRLKPVEVVAEFEHTIYHELDLMREAANASQLRRNFADSEKMYVPKIYW 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
             VH  V+V     G  +S   +    +  LK  LA  G       +L D+F HADMHPG
Sbjct: 231 DYVHRDVMVMERIYGIRISNIAELKAANTNLKK-LAEYGVEIFFTQVLRDSFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           N+ V V   ++         P  + +D G+   LS  D+  + E   A  +RD R  A
Sbjct: 290 NLFVDVTDPEN---------PKYLGVDFGIMGALSPQDQRYIAENLLAFFKRDYRQVA 338


>gi|339482359|ref|YP_004694145.1| 2-polyprenylphenol 6-hydroxylase [Nitrosomonas sp. Is79A3]
 gi|338804504|gb|AEJ00746.1| 2-polyprenylphenol 6-hydroxylase [Nitrosomonas sp. Is79A3]
          Length = 504

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 184/392 (46%), Gaps = 29/392 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P+D+  +L++L  + P         ++E+ +G++++EI
Sbjct: 56  LEALGPIFVKFGQMLSTRRDLLPQDIADELAKLQDQVPPFPSEVVISSLEKVYGKKINEI 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+E P AS S+AQVH A L   + G +      AVK+  P +   I  D  +++  A
Sbjct: 116 FLKFDETPEASASVAQVHFAVL---HDGTE-----AAVKILRPNLAPIIMHDVALMDTGA 167

Query: 344 KIS-SVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
            ++ S+    K L+L + V +FA  +  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 168 WLAESLWMDGKRLKLRQVVSEFARHLDDELDLMREAANCSQLRRNFLDSPLLFVPEVYWD 227

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
               +V+V    +G  +S +VD L+        LA +G       +  D + HADMHPGN
Sbjct: 228 YCRSSVMVMERVKGTPIS-HVDTLREQGIDIPQLARVGVEIFFTQVFRDGYFHADMHPGN 286

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V              +    I +D G+   LS  D+  L + F A  RRD    A+  
Sbjct: 287 IFV-------------GATGQYIAVDFGIMGTLSDEDKNYLAQNFLAFFRRDYGRVAQAH 333

Query: 523 LRLS---KQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +      K     + ++ I  V E    +  P  ++      + QL +  R+  V +   
Sbjct: 334 VEAGWAPKDTRVDDFESAIRAVCE--PIFDKPLKEISF-GRVLLQLFQASRQFNVEIQPQ 390

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 391 LVLLQKTLLNIEGLGRDLDPDLDLWKTAKPFL 422


>gi|258512545|ref|YP_003185979.1| ABC-1 domain-containing protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479271|gb|ACV59590.1| ABC-1 domain protein [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 562

 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 171/384 (44%), Gaps = 23/384 (5%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K GQ A+ R D+FP +L ++L++L    P  +FA  +K +E   G+ L E
Sbjct: 67  VLEKLGPTFVKLGQIASLRADVFPPELIEQLAKLQDDVPPVAFAEVRKIVEDELGQPLDE 126

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
           +F  F+E PV S SI QVHRA L+    G +     VAVKV+ P +   I  D  ++++L
Sbjct: 127 VFRAFDEEPVGSASIGQVHRAELQ---NGDE-----VAVKVQRPDIRRKIEIDLDILMDL 178

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A           +  L   V++F   ++++++   EA +  R          V  P+  +
Sbjct: 179 ARLAERHFEWAAYYELTGVVEEFRHTLLNELNYTVEAHNADRLRRVHEGDSYVRIPEIYW 238

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VL   Y +G    ++ DEL         +A   THA+L  +LV    HAD HPG
Sbjct: 239 EYTTPRVLTMEYVRG-IKLQHRDELIAKGYRTDEIARRVTHAVLTQMLVHGVFHADPHPG 297

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           N+ V                  ++F+D GM   LS   + +L     A+ RRD R     
Sbjct: 298 NLAVLPDHS-------------ILFMDFGMVGRLSADMKQHLAGLVIALMRRDTRAILRV 344

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVC 581
             R+    +  +      +VD     +       +   E + +L     RHRV +  ++ 
Sbjct: 345 LNRMGVVPHDIDEHRLYRDVDHLREKYYEIPLTQISLGEAVSELFAVAYRHRVRIPADLA 404

Query: 582 TVMVTTLVLEGWQRKLDPGYNVMD 605
            V    + +EG    LDP + +++
Sbjct: 405 LVGKALVTIEGVVEGLDPSFRILN 428


>gi|378775661|ref|YP_005177904.1| ubiquinone biosynthesis protein UbiB [Pasteurella multocida 36950]
 gi|356598209|gb|AET16935.1| ubiquinone biosynthesis protein UbiB [Pasteurella multocida 36950]
          Length = 527

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 177/400 (44%), Gaps = 27/400 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP +IK GQ  +TR DLFP D+  +L+ L  +         +  IE+A G  L   
Sbjct: 61  LQELGPVWIKLGQMLSTRRDLFPPDIADELALLQDQVDPFDGKIARAQIEKALGAPLETW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYP--GQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           FD F E  +AS SIAQVH A  +   P    ++    V +KV  P + + I  D   ++L
Sbjct: 121 FDEFNETALASASIAQVHTAKFKQNAPHLESRLAGKEVVLKVLRPNIQQMINAD---LSL 177

Query: 342 AAKISSVIPAVKW----LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP 397
             K++S IP +K     LR  E V+++   +  ++DL RE A+  +   NF     +  P
Sbjct: 178 MYKVASWIPRIKAEGRRLRPVEVVREYEKTLRDELDLRREMANAIQLRANFENSPMLYIP 237

Query: 398 KPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHAD 457
           +      H  V+V     G  VS  ++EL  +      LA  G       +  D+F HAD
Sbjct: 238 EMYKQFCHQTVIVMERIYGIPVSN-IEELHANGTNMKLLAERGVQVFFTQVFRDSFFHAD 296

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
           MHPGNI V  A             P  I +D G+   L+  D+  L E F A   RD R 
Sbjct: 297 MHPGNIFVNRAHP---------DDPQYIGIDCGIVGRLNDHDKRYLAESFVAFFNRDYRR 347

Query: 518 AAECTLR---LSKQQNCPN-PKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
            AE  +      K  N  +  +AF E  +  FA    P  ++      +  L    R + 
Sbjct: 348 VAEMHVASGWTPKDTNIDDFEQAFREVCEPIFA---KPLSEISF-GHVLLNLFNVAREYN 403

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           + V   +  +  T L +EG  R+L P  ++ DT +  L K
Sbjct: 404 MEVQPQLVLLQKTLLYIEGLGRQLYPQLDLWDTAKPFLQK 443


>gi|417854537|ref|ZP_12499827.1| hypothetical protein AAUPMG_09863 [Pasteurella multocida subsp.
           multocida str. Anand1_goat]
 gi|338217739|gb|EGP03579.1| hypothetical protein AAUPMG_09863 [Pasteurella multocida subsp.
           multocida str. Anand1_goat]
          Length = 527

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 177/400 (44%), Gaps = 27/400 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP +IK GQ  +TR DLFP D+  +L+ L  +         +  IE+A G  L   
Sbjct: 61  LQELGPVWIKLGQMLSTRRDLFPPDIADELALLQDQVDPFDGKIARAQIEKALGAPLETW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYP--GQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           FD F E  +AS SIAQVH A  +   P    ++    V +KV  P + + I  D   ++L
Sbjct: 121 FDEFNETALASASIAQVHTAKFKQNAPHLESRLAGKEVVLKVLRPNIQQMINAD---LSL 177

Query: 342 AAKISSVIPAVKW----LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP 397
             K++S IP +K     LR  E V+++   +  ++DL RE A+  +   NF     +  P
Sbjct: 178 MYKVASWIPRIKAEGRRLRPVEVVREYEKTLRDELDLRREMANAIQLRANFENSPMLYIP 237

Query: 398 KPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHAD 457
           +      H  V+V     G  VS  ++EL  +      LA  G       +  D+F HAD
Sbjct: 238 EMYKQFCHQTVIVMERIYGIPVSN-IEELHANGTNMKLLAERGVQVFFTQVFRDSFFHAD 296

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
           MHPGNI V  A             P  I +D G+   L+  D+  L E F A   RD R 
Sbjct: 297 MHPGNIFVNRAHP---------DDPQYIGIDCGIVGRLNDHDKRYLAESFVAFFNRDYRR 347

Query: 518 AAECTLR---LSKQQNCPN-PKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
            AE  +      K  N  +  +AF E  +  FA    P  ++      +  L    R + 
Sbjct: 348 VAEMHVASGWTPKDTNIDDFEQAFREVCEPIFA---KPLSEISF-GHVLLNLFNVAREYN 403

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           + V   +  +  T L +EG  R+L P  ++ DT +  L K
Sbjct: 404 MEVQPQLVLLQKTLLYIEGLGRQLYPQLDLWDTAKPFLQK 443


>gi|326390957|ref|ZP_08212507.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter ethanolicus JW
           200]
 gi|325992999|gb|EGD51441.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter ethanolicus JW
           200]
          Length = 558

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 173/386 (44%), Gaps = 27/386 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK GQ  +TR D+ P+D+ K+L +L  K P  SF   K  I+  FG  L E 
Sbjct: 60  LEELGPTFIKMGQILSTRSDILPKDVIKELEKLQDKVPAFSFDEVKSVIQNEFGESLEEA 119

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           +  FE  P+A+ SIAQVH+A L   + G+      V VKV+ PG+ + I +D  I+   A
Sbjct: 120 YAEFEPTPLAAASIAQVHKALL---WSGK-----TVVVKVQRPGIEKIIAQDMKILEDIA 171

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           K + +     K     + V+ F   +  ++D   E  +  +F  NF + K V  P  ++ 
Sbjct: 172 KFVDNHTKYGKLYNFTKMVEDFKKRLEEELDFRIEGENAEKFKKNFLKDKKVKIPSIIWT 231

Query: 403 LVHPAVLVETYEQGECVSRY--VDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                VL   Y  G  ++ +  +DE  G +R   A+A     ++L  +L D F H D HP
Sbjct: 232 HTTRRVLTMEYIDGIPLNDFNAIDE-AGLDR--GAIARNLAKSVLNQILRDGFFHGDPHP 288

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI+V                  + FLD GM   LS   +    +    +  ++ R   E
Sbjct: 289 GNIMV-------------LGDGTIAFLDFGMVGSLSPERKRQFSKMLLGIVYKNSRMITE 335

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
             + L+      N K   ++++     +     + +   E +  + + V  + + +    
Sbjct: 336 SIIDLNAVTLNVNMKKLEKDINNLRDRYVEIPLEKLKVGEVLNGIFDLVFSYNIVIPNEF 395

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDT 606
             +  + + LEG   KLDP  +V++ 
Sbjct: 396 NMLAKSLITLEGIVEKLDPKISVLEV 421


>gi|256752579|ref|ZP_05493433.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256748517|gb|EEU61567.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 555

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 185/404 (45%), Gaps = 27/404 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           +TLE  GP FIK GQ  +TR DL P D+  +L++L        F   K  +E     ++S
Sbjct: 60  KTLEELGPTFIKMGQLLSTRGDLIPHDILLELAKLQDDVEPEDFVTIKNILESELKGKIS 119

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           + F  F+E P+AS SI QV+RA ++    G+      V VKV+ P V + I  D +I+  
Sbjct: 120 DFFIYFDETPIASASIGQVYRAKIK---EGKD-----VVVKVQRPEVSQKINADIIILKN 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
            AKI +       L   E V + A  +++++D  +E  +  RF  NF +   +  PK  +
Sbjct: 172 IAKILNERIVDAPLDFVEIVDELAESLLNELDYTQEGNNAERFRENFEKESYIYIPKVYW 231

Query: 402 PLVHPAVLVETYEQGECV-SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                 VL   Y +G  V +R +   +G +  K  +A  G  A+   +      H D HP
Sbjct: 232 EYTTKRVLTMEYVEGISVKNRDLLVKKGFDLKK--IAREGAWAIFLQVYEFGLFHGDPHP 289

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNIL+    K S             ++D G+   L K+ R  +++ FKA A  D     E
Sbjct: 290 GNILITNDGKIS-------------YIDFGIVGYLDKSSREMIIDLFKAFAENDIEEVIE 336

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
               +   +   N +    ++      F+ TP  + +   + M++++  V +H++ +   
Sbjct: 337 VLSDMGAIRPDTNLRTLKSDLSHIINYFYNTPLKN-ISVNDSMRKIMSTVYKHKLILPPG 395

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYT 623
              ++ +   +EG  R LDP +++    +   +K  + +++S T
Sbjct: 396 FTLLLKSLATVEGVGRSLDPDFSISSVAKD-FIKEVYLRNISLT 438


>gi|386835566|ref|YP_006240885.1| 2-polyprenylphenol 6-hydroxylase [Pasteurella multocida subsp.
           multocida str. 3480]
 gi|425064408|ref|ZP_18467533.1| Ubiquinone biosynthesis monooxygenase UbiB [Pasteurella multocida
           subsp. gallicida X73]
 gi|385202271|gb|AFI47126.1| 2-polyprenylphenol 6-hydroxylase [Pasteurella multocida subsp.
           multocida str. 3480]
 gi|404381158|gb|EJZ77641.1| Ubiquinone biosynthesis monooxygenase UbiB [Pasteurella multocida
           subsp. gallicida X73]
          Length = 527

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 177/400 (44%), Gaps = 27/400 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP +IK GQ  +TR DLFP D+  +L+ L  +         +  IE+A G  L   
Sbjct: 61  LQELGPVWIKLGQMLSTRRDLFPPDIADELALLQDQVDPFDGKIARAQIEKALGAPLETW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYP--GQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           FD F E  +AS SIAQVH A  +   P    ++    V +KV  P + + I  D   ++L
Sbjct: 121 FDEFNETALASASIAQVHTAKFKQNAPHLESRLAGKEVVLKVLRPNIQQMINAD---LSL 177

Query: 342 AAKISSVIPAVKW----LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP 397
             K++S IP +K     LR  E V+++   +  ++DL RE A+  +   NF     +  P
Sbjct: 178 MYKVASWIPRIKAEGRRLRPVEVVREYEKTLRDELDLRREMANAIQLRANFENSPMLYIP 237

Query: 398 KPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHAD 457
           +      H  V+V     G  VS  ++EL  +      LA  G       +  D+F HAD
Sbjct: 238 EMYKQFCHQTVIVMERIYGIPVSN-IEELHANGTNMKLLAERGVQVFFTQVFRDSFFHAD 296

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
           MHPGNI V  A             P  I +D G+   L+  D+  L E F A   RD R 
Sbjct: 297 MHPGNIFVNRAHP---------DDPQYIGIDCGIVGRLNDHDKRYLAESFVAFFNRDYRR 347

Query: 518 AAECTLR---LSKQQNCPN-PKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
            AE  +      K  N  +  +AF E  +  FA    P  ++      +  L    R + 
Sbjct: 348 VAEMHVASGWTPKDTNIDDFEQAFREVCEPIFA---KPLSEISF-GHVLLNLFNVAREYN 403

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           + V   +  +  T L +EG  R+L P  ++ DT +  L K
Sbjct: 404 MEVQPQLVLLQKTLLYIEGLGRQLYPQLDLWDTAKPFLQK 443


>gi|374629181|ref|ZP_09701566.1| ABC-1 domain-containing protein [Methanoplanus limicola DSM 2279]
 gi|373907294|gb|EHQ35398.1| ABC-1 domain-containing protein [Methanoplanus limicola DSM 2279]
          Length = 549

 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 182/398 (45%), Gaps = 32/398 (8%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P  R ++  + L  LE  GP F+K+GQ  A++ D  P ++ ++L +LH       F   +
Sbjct: 43  PDERSVYERIRL-GLEELGPTFVKFGQMLASQSDKLPPEMIRELKKLHEHVKPVPFEELR 101

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329
            TIE   GR + E F  FE+ P+A+ SI QVHRA L   + G      +VA+K++ P + 
Sbjct: 102 PTIESYTGRPVEEAFAYFEKKPIAAASIGQVHRAVL---HDGT-----IVAIKIQRPDIE 153

Query: 330 ESIRRDFVII-NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
           + I  D VI+ N+A+++  V P  +   L   V  F   M  ++D A E  +   F  NF
Sbjct: 154 DKIATDTVILENMASRLEKVNPMARAYNLTGLVGDFTRMMKKELDYASEGKNADIFRRNF 213

Query: 389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML 448
           +  KD+ FPK  +      +L   Y +G  V    D ++ +      +A  G  A LKM+
Sbjct: 214 KDRKDIKFPKIYWEYSGSKMLTMEYIEGIRVDN-ADGIRIYGYDPKEIASRGFSAYLKMI 272

Query: 449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPH--VIFLDVGMTAELSKTDRVNLVEF 506
             D F H D HPGN+               R  P+  + FLD+G  A +    R   +  
Sbjct: 273 FEDGFFHLDPHPGNL---------------RVTPYGDLSFLDLGAVAIVRPERRDLFIRL 317

Query: 507 FKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL--VHPAECMQQ 564
             A+   D     E   +L       N +   +E+   ++ + +   DL  V+P E ++ 
Sbjct: 318 LLAIVDNDVDMLIETLQKLGVTIREENMEDVKDEI--YYSLFDSESVDLSSVNPGETIEN 375

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYN 602
           +   + R+ + +   + +++   +++     KL P +N
Sbjct: 376 IPRVLNRYDIKIPDTLMSLLKVIVMVLDIGIKLSPDFN 413


>gi|304413118|ref|ZP_07394591.1| 2-octaprenylphenol hydroxylase [Candidatus Regiella insecticola
           LSR1]
 gi|304283961|gb|EFL92354.1| 2-octaprenylphenol hydroxylase [Candidatus Regiella insecticola
           LSR1]
          Length = 540

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 178/405 (43%), Gaps = 32/405 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP +IK+GQ  +TR DLF  ++  +L+ L  +      +  ++ IE A G  L+  
Sbjct: 59  LQQLGPVWIKFGQMMSTRRDLFSTEIADQLTLLQDRVAPFDGSLARQCIESAMGAPLATW 118

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           FD F++  +AS SIAQVHRA  R +  GQ+     V +KV  P +   I+ D  ++  LA
Sbjct: 119 FDDFDQQALASASIAQVHRA--RLKSNGQE-----VVLKVIRPNIRPIIKADIRLMYRLA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             I  ++P  + LR  E V+++   +  +++L REAA+  +   NF+    +  PK    
Sbjct: 172 KWIPKLLPDSRRLRPYEVVKEYEKTLFDELNLLREAANAIQLRRNFKNSSTLYIPKVYSD 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
           L    VLV     G  VS      Q    +K  LA  G       +  DNF HADMHPGN
Sbjct: 232 LCRENVLVMERIYGIPVSDITALEQNGTNMK-LLAERGVQVFFTQVFRDNFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V     +          P  I +D G+   L+K D+  L E F A   RD +  AE  
Sbjct: 291 IFVSYQHPQD---------PLYIGIDFGIVGALNKADKRYLAENFVAFFNRDYQRVAELH 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP------AECMQQLLEKVRRHRVNV 576
           L      +  N + F       FA     E     P         +  L    RR  + +
Sbjct: 342 LHSGWVPDDTNVEDF------EFAIRTLCEPIFAKPLAEISFGHLLLNLFNTARRFNMEI 395

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLS 621
              +  +  T L +EG  R+L P  ++  T +  L   +W +  S
Sbjct: 396 QPQLVLLQKTLLYIEGLGRQLYPKLDLWATAKPFL--ENWLRDQS 438


>gi|345017522|ref|YP_004819875.1| serine/threonine protein kinase [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|344032865|gb|AEM78591.1| serine/threonine protein kinase [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 555

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 175/382 (45%), Gaps = 26/382 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           +TLE  GP FIK GQ  +TR DL P D+  +L++L        F   K  +E     ++S
Sbjct: 60  KTLEELGPTFIKLGQLLSTRGDLIPHDILLELAKLQDDVEPEDFVAIKNILESELKGKIS 119

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           + F  FEE P+AS SI QV+RA ++    G+      V VKV+ P V + I  D +I+  
Sbjct: 120 DFFTYFEETPIASASIGQVYRAKIK---EGKD-----VVVKVQRPEVSQKINADIIILKN 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
            AKI +       +   E + + A  +++++D A+E  +  RF  NF +   +  PK  +
Sbjct: 172 IAKILNERIVDAPVDFVEIIDELAESLLNELDYAQEGNNAERFRENFEKESYIYIPKIYW 231

Query: 402 PLVHPAVLVETYEQGECV-SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                 VL   Y +G  V +R +   +G +  K  +A  G  A+   +      H D HP
Sbjct: 232 KYTTKRVLTMEYVEGISVKNRDLLVKKGFDLKK--IAREGAWAIFLQVYEFGLFHGDPHP 289

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNIL+    K S             ++D G+   L K+ R  +++ FKA A  D     E
Sbjct: 290 GNILITNDGKIS-------------YIDFGIVGYLDKSSREMIIDLFKAFAENDIEEVIE 336

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
               +   +   N +    ++      F+ TP  + +   + M++++  V +H++ +   
Sbjct: 337 VLSDVGAIRPDTNLRTLKSDLSHIINYFYNTPLKN-ISVNDSMRKIMSTVYKHKLILPPE 395

Query: 580 VCTVMVTTLVLEGWQRKLDPGY 601
              ++ +   +EG  R LDP +
Sbjct: 396 FTLLLKSLATVEGVGRSLDPDF 417


>gi|410667855|ref|YP_006920226.1| ABC-1-like protein kinase [Thermacetogenium phaeum DSM 12270]
 gi|409105602|gb|AFV11727.1| ABC-1-like protein kinase [Thermacetogenium phaeum DSM 12270]
          Length = 558

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 172/389 (44%), Gaps = 27/389 (6%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R L   GP FIK GQ  +TR DL P +  ++LS+L    P  S    +K I   FGR 
Sbjct: 65  VARVLGELGPTFIKLGQLLSTRADLLPAEYLQELSKLQDHVPPLSSEEVEKLIVEEFGRP 124

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           ++EIF GFE   +AS SI QVHRA+L     GQ      V VK+R PGV   IR D  I+
Sbjct: 125 INEIFAGFEPQALASASIGQVHRATL---PDGQ-----AVVVKIRRPGVARMIRVDLEIL 176

Query: 340 NLAAKISSVIPAV-KWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
              AKI      V +   +   V +F   ++ ++D   E  +      N +    V  PK
Sbjct: 177 EDIAKIVEHRTRVGRIYNIAGMVAEFRNTLLEELDFTLEGRNAEILKKNMQEDPHVYIPK 236

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQ-GHERLKSALAHIGTHALLKMLLVDNFIHAD 457
             +      VLV  Y +G  ++   + L  G +     +A     +++K + +D F H+D
Sbjct: 237 VFWDYTTERVLVLEYVKGRKITNRKELLDAGFD--PRFIAQTLVDSIIKQIYIDGFFHSD 294

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGN+ +    K             ++FLD G    L +  R    +   A+AR D   
Sbjct: 295 PHPGNLAILPGNK-------------IVFLDFGQVGHLDEELREKAADLVLALARHDIDG 341

Query: 518 AAECTLRLSKQQNCPNPKAFIEEVDE-AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
                LR+      P+      ++      ++G P  + +     +Q+L+E   RH++  
Sbjct: 342 VLRGILRIGMANKQPDLSGLRRDISRLERKYYGMPLSE-IQVGVSIQELMEVAWRHQIQA 400

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
             +    +   + LEG  R+L P  ++++
Sbjct: 401 PSDFVMAVKALVTLEGTIRELAPDISLVE 429


>gi|383311752|ref|YP_005364562.1| 2-polyprenylphenol 6-hydroxylase [Pasteurella multocida subsp.
           multocida str. HN06]
 gi|380873024|gb|AFF25391.1| 2-polyprenylphenol 6-hydroxylase [Pasteurella multocida subsp.
           multocida str. HN06]
          Length = 527

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 177/400 (44%), Gaps = 27/400 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP +IK GQ  +TR DLFP D+  +L+ L  +         +  IE+A G  L   
Sbjct: 61  LQELGPVWIKLGQMLSTRRDLFPPDIADELALLQDQVDPFDGKIARAQIEKALGAPLETW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYP--GQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           FD F E  +AS SIAQVH A  +   P    ++    V +KV  P + + I  D   ++L
Sbjct: 121 FDEFNEIALASASIAQVHTAKFKQNAPHLESRLAGKEVVLKVLRPNIQQMINAD---LSL 177

Query: 342 AAKISSVIPAVKW----LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP 397
             K++S IP +K     LR  E V+++   +  ++DL RE A+  +   NF     +  P
Sbjct: 178 MYKVASWIPRIKAEGRRLRPVEVVREYEKTLRDELDLRREMANAIQLRANFENSPMLYIP 237

Query: 398 KPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHAD 457
           +      H  V+V     G  VS  ++EL  +      LA  G       +  D+F HAD
Sbjct: 238 EMYKQFCHQTVIVMERIYGIPVSN-IEELHANGTNMKLLAERGVQVFFTQVFRDSFFHAD 296

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
           MHPGNI V  A             P  I +D G+   L+  D+  L E F A   RD R 
Sbjct: 297 MHPGNIFVNRAHP---------DDPQYIGIDCGIVGRLNDHDKRYLAESFVAFFNRDYRR 347

Query: 518 AAECTLR---LSKQQNCPN-PKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
            AE  +      K  N  +  +AF E  +  FA    P  ++      +  L    R + 
Sbjct: 348 VAEMHVASGWTPKDTNIDDFEQAFREVCEPIFA---KPLSEISF-GHVLLNLFNVAREYN 403

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           + V   +  +  T L +EG  R+L P  ++ DT +  L K
Sbjct: 404 MEVQPQLVLLQKTLLYIEGLGRQLYPQLDLWDTAKPFLQK 443


>gi|392941131|ref|ZP_10306775.1| LOW QUALITY PROTEIN: 2-polyprenylphenol 6-hydroxylase
           [Thermoanaerobacter siderophilus SR4]
 gi|392292881|gb|EIW01325.1| LOW QUALITY PROTEIN: 2-polyprenylphenol 6-hydroxylase
           [Thermoanaerobacter siderophilus SR4]
          Length = 555

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 185/404 (45%), Gaps = 27/404 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           +TLE  GP FIK GQ  +TR DL P D+  +L++L        F   K  +E     ++S
Sbjct: 60  KTLEELGPTFIKLGQLLSTRGDLIPHDILLELAKLQDDVEPEDFVAIKNILESELKGKIS 119

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           + F  F+E P+AS SI QV+RA ++    G+      V VKV+ P V + I  D +I+  
Sbjct: 120 DFFIYFDETPIASASIGQVYRAKIK---EGKD-----VVVKVQRPEVSQKINADIIILKN 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
            AKI +       L   E V + A  +++++D  +E  +  RF  NF +   +  PK  +
Sbjct: 172 IAKILNERIVDAPLDFVEIVDELAESLLNELDYTQEGNNAERFRENFEKESYIYIPKIYW 231

Query: 402 PLVHPAVLVETYEQGECV-SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                 VL   Y +G  V +R +   +G +  K  +A  G  A+   +      H D HP
Sbjct: 232 KYTTKRVLTMEYVEGISVKNRDLLVKKGFDLKK--IAREGAWAIFLQVYEFGLFHGDPHP 289

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNIL+    K S             ++D G+   L K+ R  +++ FKA A  D     E
Sbjct: 290 GNILITNDGKIS-------------YIDFGIVGYLDKSSREMIIDLFKAFAENDIEEVIE 336

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
               +   +   N +    ++      F+ TP  + +   + M++++  V +H++ +   
Sbjct: 337 VLSDMGAIRPDTNLRTLKSDLSHIINYFYNTPLKN-ISVNDSMRKIMSTVYKHKLILPPE 395

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYT 623
              ++ +   +EG  R LDP +++    +   +K  + +++S T
Sbjct: 396 FTLLLKSLATVEGVGRSLDPDFSISSVAKD-FIKQVYLRNISLT 438


>gi|421264456|ref|ZP_15715437.1| hypothetical protein KCU_08814 [Pasteurella multocida subsp.
           multocida str. P52VAC]
 gi|401688218|gb|EJS83860.1| hypothetical protein KCU_08814 [Pasteurella multocida subsp.
           multocida str. P52VAC]
          Length = 527

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 177/400 (44%), Gaps = 27/400 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP +IK GQ  +TR DLFP D+  +L+ L  +         +  IE+A G  L   
Sbjct: 61  LQELGPVWIKLGQMLSTRRDLFPPDIADELALLQDQVDPFDGKIARAQIEKALGAPLETW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYP--GQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           FD F E  +AS SIAQVH A  +   P    ++    V +KV  P + + I  D   ++L
Sbjct: 121 FDEFNETALASASIAQVHTAKFKQNAPHLESRLAGKEVVLKVLRPNIQQMINAD---LSL 177

Query: 342 AAKISSVIPAVKW----LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP 397
             K++S IP +K     LR  E V+++   +  ++DL RE A+  +   NF     +  P
Sbjct: 178 MYKVASWIPRIKAEGRRLRPVEVVREYEKTLRDELDLRREMANAIQLRANFENSPMLYIP 237

Query: 398 KPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHAD 457
           +      H  V+V     G  VS  ++EL  +      LA  G       +  D+F HAD
Sbjct: 238 EMYKQFCHQTVIVMERIYGIPVSN-IEELHANGTNMKLLAKRGVQVFFTQVFRDSFFHAD 296

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
           MHPGNI V  A             P  I +D G+   L+  D+  L E F A   RD R 
Sbjct: 297 MHPGNIFVNRAHP---------DDPQYIGIDCGIVGRLNDHDKRYLAESFVAFFNRDYRR 347

Query: 518 AAECTLR---LSKQQNCPN-PKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
            AE  +      K  N  +  +AF E  +  FA    P  ++      +  L    R + 
Sbjct: 348 VAEMHVASGWTPKDTNIDDFEQAFREVCEPIFA---KPLSEISF-GHVLLNLFNVAREYN 403

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           + V   +  +  T L +EG  R+L P  ++ DT +  L K
Sbjct: 404 MEVQPQLVLLQKTLLYIEGLGRQLYPQLDLWDTAKPFLQK 443


>gi|119946477|ref|YP_944157.1| ubiquinone biosynthesis protein [Psychromonas ingrahamii 37]
 gi|119865081|gb|ABM04558.1| 2-octaprenylphenol hydroxylase [Psychromonas ingrahamii 37]
          Length = 559

 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 169/382 (44%), Gaps = 24/382 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK GQ  +TR DLF  +   +  +L  +A    FA   + ++  FG    E+
Sbjct: 68  LEEMGPTFIKLGQIFSTRVDLFSPEWIIEFEKLQDQAQAVPFAAICQQLQEDFGCAPQEV 127

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           F  F   P+A+ SIAQVHRA L   + G       V +KVR PG+   +  D  ++  +A
Sbjct: 128 FAEFNPEPLAAASIAQVHRARL---HDGS-----AVVIKVRRPGIRPIMEADLRLLARIA 179

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             I S    +   +  E V QF + +  ++DL  E  +  R   NF    ++  PK  +P
Sbjct: 180 DLIESESTTLSRFKPREVVHQFTLSLRRELDLLAECRNAERIALNFSDHPEIIVPKVYWP 239

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                V V+ Y +G    R +D +      +  LA  G  A LKM+L+D F HAD H GN
Sbjct: 240 WCSERVNVQEYIEG-IPGRNLDAIDKANLNRKILAQHGGEAALKMILIDGFFHADPHQGN 298

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I              +     + F+D GM   LS+  R  +V    ++  +D  +  E  
Sbjct: 299 I-------------FYLPGNRIAFIDFGMVGRLSERRRNQVVNLLYSMVEQDSASVVEVL 345

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCT 582
           L  +   +       +E       ++     D  +    + +L    R H +N+  ++  
Sbjct: 346 LDWAGDSSIDTEGLLLEVEGFIDQYYKVSLKDF-NLGSMLIELTTLFREHGLNLPPDLVL 404

Query: 583 VMVTTLVLEGWQRKLDPGYNVM 604
           ++   + LEG  R+LDP YN++
Sbjct: 405 LIKPLITLEGVARQLDPDYNMV 426


>gi|440228995|ref|YP_007342788.1| 2-octaprenylphenol hydroxylase [Serratia marcescens FGI94]
 gi|440050700|gb|AGB80603.1| 2-octaprenylphenol hydroxylase [Serratia marcescens FGI94]
          Length = 543

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 179/392 (45%), Gaps = 24/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP +IK+GQ  +TR DLFP  +  +L+ L  +      A  +K IE A G  L E 
Sbjct: 61  LQELGPVWIKFGQMMSTRRDLFPPHIADQLTLLQDRVAPFDGALARKHIELALGGPLEEW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           FD FE+ P+AS SIAQVH A  R +  G++     V +KV  P +G  I+ D  ++  LA
Sbjct: 121 FDDFEQQPLASASIAQVHTA--RLKTTGKE-----VVLKVIRPDIGPIIKADVRLMYRLA 173

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  ++P  + LR  E V+++   ++ +++L REAA+  +   NF     +  P+    
Sbjct: 174 GWVPKLLPDGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFDGSPMLYVPEVYSD 233

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
               ++LV     G  VS  +  L+        LA  G       +  D+F HADMHPGN
Sbjct: 234 YCRESLLVMERIYGIPVSD-IPTLEAQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGN 292

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V     +          P  I +D G+   L+K D+  L E F A   RD R  AE  
Sbjct: 293 IFVSYEHPED---------PRYIGIDCGIVGSLNKDDKRYLAENFIAFFNRDYRKVAELH 343

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    + +  N  + +  I  V E    +  P  ++      +  L    RR  + V   
Sbjct: 344 VDSGWVPRDTNVEDFEFAIRTVCE--PIFEKPLAEISF-GNVLLNLFNTARRFNMEVQPQ 400

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L P  ++  T +  L
Sbjct: 401 LVLLQKTLLYVEGLGRQLYPQLDLWTTAKPFL 432


>gi|53803691|ref|YP_114451.1| ubiquinone biosynthesis protein AarF [Methylococcus capsulatus str.
           Bath]
 gi|53757452|gb|AAU91743.1| ubiquinone biosynthesis protein AarF [Methylococcus capsulatus str.
           Bath]
          Length = 542

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 176/395 (44%), Gaps = 31/395 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE  GP F+K+GQ  +TR DL P D+ ++L +L  + P       ++T+E A G+ + 
Sbjct: 60  RALEELGPIFVKFGQTLSTRRDLLPDDIGEELVKLQDRVPPFPGVEARRTVESALGQPVG 119

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
            +F  F+E P+AS S+AQVH A L   + G++     V VKV  PGV + I  D  ++  
Sbjct: 120 TLFRSFDEEPLASASVAQVHAARL---HSGEE-----VVVKVLRPGVRQRIEADIELLYA 171

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           LA       P  + LR  E V +F   ++ ++DL REAA+ +     F     +  PK  
Sbjct: 172 LAGMAQRFWPDARRLRPTEVVAEFEKTILDELDLVREAANAAEIRRRFETSGILYVPKVY 231

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +      V+V     G  +       +    LK  LA  G       +  D+F HADMHP
Sbjct: 232 WDYTRRDVMVMERIAGIPIGDVPQLRRAGVDLK-LLAERGVEIFFTQVFRDSFFHADMHP 290

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI                +    I +D G+   +SK D+  + E F A   RD R  AE
Sbjct: 291 GNIFA-------------TTDARYIAVDFGIVGSISKADQYYVAENFLAFFNRDYRRVAE 337

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTP--EGDL--VHPAECMQQLLEKVRRHRVNV 576
             +    +     P   IEE + A      P  E  L  +   + + +L +  RR  + V
Sbjct: 338 MHV----ESGWVPPTTRIEEFESAIRSVSEPIFEKPLKEISYGQVLLRLFQVARRFDMEV 393

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R+L P  ++  T +  L
Sbjct: 394 QPQLVLLQKTLLNIEGLGRELYPDLDLWQTAKPFL 428


>gi|332706920|ref|ZP_08426981.1| putative unusual protein kinase, partial [Moorea producens 3L]
 gi|332354804|gb|EGJ34283.1| putative unusual protein kinase [Moorea producens 3L]
          Length = 496

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 179/393 (45%), Gaps = 30/393 (7%)

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGF 287
           GP ++K GQ  +TRPDL P    + L++L +  P  +++  +  +++   + +SE F   
Sbjct: 1   GPVYVKLGQLLSTRPDLLPGAYVEVLTDLQANVPAVAWSEIESLLQQELAKPISETFTTI 60

Query: 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISS 347
               +A+GSI QVHRA+L+    GQ+     VA+KV+ PG+ + + +D  II   A++ S
Sbjct: 61  NPQAIAAGSIGQVHRATLK---NGQE-----VALKVQRPGIDQIVAQDIAIIRGLAELVS 112

Query: 348 VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF--RRWKD---VSFPKPVYP 402
           +    K   +     +F   + +++D  +EA +  +   N    RW D   +  PK  + 
Sbjct: 113 LTEFGKTYDIVVIADEFVTALEAELDFTQEANYTDKLRSNLSNSRWFDSQQLVIPKIYWD 172

Query: 403 LVHPAVL-VETYEQGECVSRYVDELQGHERLKSALAHIGT---HALLKMLLVDNFIHADM 458
           L    +L +E  E    +S  + + Q  +  ++    I T    A  + + +D F HAD 
Sbjct: 173 LTSQKLLTIEWLEGAPLLSAQLSQTQEGKDPQTQRREITTLLFRAFFQQVYIDGFFHADP 232

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI              +     V  LD GM   L    +  L E   A+   DG+  
Sbjct: 233 HPGNI-------------FYLRDGRVALLDCGMIGRLDPRSQQILTEMLLAIVDLDGKRC 279

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
           A+ TL+LS+     N      + D     +       ++ +E   ++L+  R +++ + G
Sbjct: 280 AQLTLQLSEAGESVNLSGLENDYDRMLRKYYNRSLSKINFSEVFYEILQVSRNNKIRLPG 339

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           N+     T   LEG  R   P  N++D ++ L+
Sbjct: 340 NMGLYAKTLANLEGVTRGFYPDINLLDQIKPLI 372


>gi|167040104|ref|YP_001663089.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter sp. X514]
 gi|300914188|ref|ZP_07131504.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter sp. X561]
 gi|307724577|ref|YP_003904328.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter sp. X513]
 gi|166854344|gb|ABY92753.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter sp. X514]
 gi|300889123|gb|EFK84269.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter sp. X561]
 gi|307581638|gb|ADN55037.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter sp. X513]
          Length = 555

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 185/404 (45%), Gaps = 27/404 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           +TLE  GP FIK GQ  +TR DL P D+  +L++L        F   K  +E     ++S
Sbjct: 60  KTLEELGPTFIKMGQLLSTRGDLIPHDILLELAKLQDDVEPEDFVTIKNILESELKGKIS 119

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           + F  F+E P+AS SI QV+RA ++    G+      V VKV+ P V + I  D +I+  
Sbjct: 120 DFFIYFDETPIASASIGQVYRAKIK---EGKD-----VVVKVQRPEVSQKINADIIILKN 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
            AKI +       L   E V + A  +++++D  +E  +  RF  NF +   +  PK  +
Sbjct: 172 IAKILNERIVDAPLDFVEIVDELAESLLNELDYTQEGNNAERFRENFEKESYIYIPKVYW 231

Query: 402 PLVHPAVLVETYEQGECV-SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                 VL   Y +G  V +R +   +G +  K  +A  G  A+   +      H D HP
Sbjct: 232 GYTTKRVLTMEYVEGISVKNRDLLVKKGFDLKK--IAREGAWAIFLQVYEFGLFHGDPHP 289

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNIL+    K S             ++D G+   L K+ R  +++ FKA A  D     E
Sbjct: 290 GNILITNDGKIS-------------YIDFGIVGYLDKSSREMIIDLFKAFAENDIEEVIE 336

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
               +   +   N +    ++      F+ TP  + +   + M++++  V +H++ +   
Sbjct: 337 VLSDMGAIRPDTNLRTLKSDLSHIINYFYNTPLKN-ISVNDSMRKIMSTVYKHKLILPPG 395

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYT 623
              ++ +   +EG  R LDP +++    +   +K  + +++S T
Sbjct: 396 FTLLLKSLATVEGVGRSLDPDFSISSVAKD-FIKEVYLRNISLT 438


>gi|374606901|ref|ZP_09679718.1| ABC-1 domain-containing protein [Paenibacillus dendritiformis C454]
 gi|374387503|gb|EHQ59008.1| ABC-1 domain-containing protein [Paenibacillus dendritiformis C454]
          Length = 554

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 179/389 (46%), Gaps = 33/389 (8%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GPAFIK GQ  +TR DL P  + ++L +L  + P  + A   + IE   GR L +
Sbjct: 58  VLEELGPAFIKLGQLLSTRADLLPGSVIQELEKLQDQVPPFTGAEAGRIIEDELGRPLGQ 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F++ P+A+ SI QVH+A L    P        VAVKV+ PG+   I RD  I  L 
Sbjct: 118 LFLRFDDIPLAAASIGQVHKAWL----PNGD----AVAVKVQRPGITSIIERDLEI--LQ 167

Query: 343 AKISSVIPAVKWL---RLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             I +      W+   ++ E VQ+FA  M++++D   E  +  +     RR   +  P+ 
Sbjct: 168 GLIEAATRRWSWVSEYQIPEMVQEFAKSMIAELDYQHEGRNTDKMAQLLRRDPGIHIPRI 227

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDEL-QGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
            +      VL   Y  G  ++ Y + L  G ER +  +A    HA+L ++ +D F HAD 
Sbjct: 228 DWDRSSAKVLTMEYMDGVMLNHYTERLPDGPERKR--IAERLVHAMLHLIFIDGFFHADP 285

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVA--RRDGR 516
           HPGNI+V           L++++  +  +D GM  +L+   +  L E   A+   R  G 
Sbjct: 286 HPGNIMV-----------LYQNR--IALIDFGMVGQLNGEMKEYLAELIIALMQHRTSGM 332

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
             A   L L   +         +       ++  P  + V   + +  L    ++HR+  
Sbjct: 333 LRAIARLCLISDRTD-LDALRRDLDRLRDRYYDVPFSE-VSLGQSLHDLFAVAKKHRIVF 390

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
             ++  +    L +EG   +LDP  +++D
Sbjct: 391 PPDLILLAKALLTMEGIVERLDPTLSILD 419


>gi|390989120|ref|ZP_10259420.1| 2-polyprenylphenol 6-hydroxylase [Xanthomonas axonopodis pv.
           punicae str. LMG 859]
 gi|372556154|emb|CCF66395.1| 2-polyprenylphenol 6-hydroxylase [Xanthomonas axonopodis pv.
           punicae str. LMG 859]
          Length = 558

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 175/400 (43%), Gaps = 53/400 (13%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP F+K GQ  ATR DL P +  ++LSEL +  P   F   +  +  A G  
Sbjct: 63  VRRALEELGPTFVKLGQVLATRVDLLPPEWIEELSELQNAVPALPFDQIRPQLVAALGME 122

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VI 338
              +F   +E P+A+ S+AQ HRA L        V    V +K+R P +G++I  D  ++
Sbjct: 123 PESVFARLDEQPLAAASLAQTHRAWL--------VDGTPVVLKIRRPDIGDTIDADLRLL 174

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA  + +  P +K  R  E VQQF V +  ++D A E  +  R   NF     V    
Sbjct: 175 ARLAEIVETRAPDLKRYRPSEVVQQFTVSLRRELDFAAEGRNAERIAANFAHDAQV---- 230

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERL--------KSALAHIGTHALLKMLLV 450
                V PAV  E   +   V  +VD + G + L        + ALA  G   +LKM+L 
Sbjct: 231 -----VVPAVYWEWTSESLNVQEFVDGIPGRDLLAVDAAGLDRRALARAGAGIVLKMVLQ 285

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV 510
           D   HAD HPGNI              +     +  +D GM   +S+  R  + +    +
Sbjct: 286 DGCFHADPHPGNI-------------FYLRDGRIAVIDFGMVGRVSEQRRFQVAQLLHGM 332

Query: 511 ARRDGRTA-------AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQ 563
              D           A  +L + + +   +  AF++E      + G P  +L      + 
Sbjct: 333 VSYDAEAVIDVLLEWAGTSLEIDEARLQQDIGAFVDE------YRGVPLKEL-RIGAMLG 385

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
            +   +R H + +  ++  ++   L LEG  R+LDP +++
Sbjct: 386 DVTSILRDHGLTLPSDLALMIKAFLTLEGMGRQLDPDFDM 425


>gi|167037438|ref|YP_001665016.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115851|ref|YP_004186010.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|166856272|gb|ABY94680.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319928942|gb|ADV79627.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 555

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 185/404 (45%), Gaps = 27/404 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           +TLE  GP FIK GQ  +TR DL P D+  +L++L        F   K  +E     ++S
Sbjct: 60  KTLEELGPTFIKMGQLLSTRGDLIPHDILLELAKLQDDVEPEDFVTIKNILESELKGKIS 119

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           + F  F+E P+AS SI QV+RA ++    G+      V VKV+ P V + I  D +I+  
Sbjct: 120 DFFIYFDETPIASASIGQVYRAKIK---EGKD-----VVVKVQRPEVSQKINADIIILKN 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
            AKI +       L   E V + A  +++++D  +E  +  RF  NF +   +  PK  +
Sbjct: 172 IAKILNERIVDAPLDFVEIVDELAESLLNELDYTQEGNNAERFRENFEKESYIYIPKVYW 231

Query: 402 PLVHPAVLVETYEQGECV-SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                 VL   Y +G  V +R +   +G +  K  +A  G  A+   +      H D HP
Sbjct: 232 GYTTKRVLTMEYVEGISVKNRDLLVKKGFDLKK--IAREGAWAIFLQVYEFGLFHGDPHP 289

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNIL+    K S             ++D G+   L K+ R  +++ FKA A  D     E
Sbjct: 290 GNILITNDGKIS-------------YIDFGIVGYLDKSSREMIIDLFKAFAENDIEEVIE 336

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
               +   +   N +    ++      F+ TP  + +   + M++++  V +H++ +   
Sbjct: 337 VLSDMGAIRPDTNLRTLKSDLSHIINYFYNTPLKN-ISVNDSMRKIMSTVYKHKLILPPG 395

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYT 623
              ++ +   +EG  R LDP +++    +   +K  + +++S T
Sbjct: 396 FTLLLKSLATVEGVGRSLDPDFSISSVAKD-FIKEVYLRNISLT 438


>gi|365921615|ref|ZP_09445881.1| 2-polyprenylphenol 6-hydroxylase [Cardiobacterium valvarum F0432]
 gi|364575806|gb|EHM53174.1| 2-polyprenylphenol 6-hydroxylase [Cardiobacterium valvarum F0432]
          Length = 533

 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 187/406 (46%), Gaps = 29/406 (7%)

Query: 217 LHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF 276
           LH+ L+ L   GP F+K GQ  +TRPDL   DL ++LS+L  + P       ++ IE A 
Sbjct: 57  LHLALQDL---GPIFVKLGQTLSTRPDLLSPDLLEELSKLQDRVPPFPGLEARRIIETAL 113

Query: 277 GRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF 336
           G  L   F GF+E  +AS S+AQVH A+L   + G+      V +KV  PGV +++  D 
Sbjct: 114 GEPLENHFAGFDETALASASVAQVHAATL---HSGEN-----VIIKVLRPGVEKAVAADI 165

Query: 337 VIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF 396
            ++   A+++S     + LR  E V++F   M +++DL  EAA+ S+   NF R   +  
Sbjct: 166 ALMYQLARLASCTGEGRRLRPVEVVREFENTMANELDLMFEAANASQLRANFTRSPLLYV 225

Query: 397 PKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHA 456
           P+  +      +L         ++        H  +K  LA  G       +  D+F HA
Sbjct: 226 PEIHWRYCRKNILTMERIYATNIADQDAIHAAHTNMK-VLAQRGVEIFFTQVFRDSFFHA 284

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNI V  +  ++         P    +D G+   L+  D+  L E F A   RD R
Sbjct: 285 DMHPGNIFVDTSNPEA---------PRYCAIDFGIMGSLTPEDQHYLAENFLAFFNRDYR 335

Query: 517 TAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
             AE  +    +       + +A I +V E    +G P  ++      +  L +  RR  
Sbjct: 336 RVAELHVESGWVPGDTRITDFEAAIRKVSE--PIFGKPIKEISF-GTFLISLFQTARRFN 392

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           +++   +  +  T   +EG  R+L P  ++  T + +L    W K+
Sbjct: 393 MHIQPQLVLLQKTFFNVEGLGRRLYPELDLWTTAKPVL--EAWMKT 436


>gi|406598319|ref|YP_006749449.1| protein kinase [Alteromonas macleodii ATCC 27126]
 gi|407685312|ref|YP_006800486.1| protein kinase [Alteromonas macleodii str. 'English Channel 673']
 gi|406375640|gb|AFS38895.1| protein kinase [Alteromonas macleodii ATCC 27126]
 gi|407246923|gb|AFT76109.1| protein kinase [Alteromonas macleodii str. 'English Channel 673']
          Length = 542

 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 179/401 (44%), Gaps = 27/401 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSE 282
           L+  GP FIK+GQ  +TR DL P  +  +L+ L  K P  S    +  I++A G   LSE
Sbjct: 58  LQNLGPVFIKFGQMLSTRRDLLPPAIANELARLQDKVPPFSSDAAQDIIKQALGLSDLSE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
           +F  FE+AP+AS SIAQVH A L+            V VKV  P + ++I  D  ++ +L
Sbjct: 118 LFSEFEKAPLASASIAQVHAAKLKHNNED-------VVVKVLRPDIRDTIVADMELLFSL 170

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +   +P  K LR  E V ++   ++ ++DL RE+A+  +   NF     +  PK   
Sbjct: 171 ANVLQRWLPDGKRLRPVEVVVEYRKTIVDELDLLRESANGIQLGRNFEGSDALYVPKIYS 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VLV     G  +S  +D L         LA  G       +  D+F HADMHPG
Sbjct: 231 DYCRSNVLVMERIYGLPISN-IDALLTQNTNMKKLAERGVEVFFTQVFRDSFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V     ++         P  I +D G+   L++ D+  L E F A   RD R  A+ 
Sbjct: 290 NIFVSTEHPEN---------PKYIAIDFGIVGTLNREDKRYLAENFIAFFNRDYRKVAQL 340

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
                 + +  N    +  I  V E    +  P  ++      + QL    RR  + V  
Sbjct: 341 HADSGWVPQDTNIDEFEMAIRTVCE--PIFQKPLAEISF-GNVLLQLFNTARRFNMVVQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
            +  +  T L +EG  R+L P  ++  T +  L   +W K 
Sbjct: 398 QLVLLQKTLLYIEGLGRQLYPQLDLWKTAKPFL--ENWMKE 436


>gi|374621543|ref|ZP_09694074.1| 2-polyprenylphenol 6-hydroxylase [Ectothiorhodospira sp. PHS-1]
 gi|373940675|gb|EHQ51220.1| 2-polyprenylphenol 6-hydroxylase [Ectothiorhodospira sp. PHS-1]
          Length = 556

 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 178/393 (45%), Gaps = 29/393 (7%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           + R LE  GP FIK+GQ  +TR DL P D+  +L++L  + P       +  IE++ GR 
Sbjct: 60  IRRALEDLGPIFIKFGQMISTRRDLLPEDIAVELAKLQDRVPPFPNEQARAIIEKSLGRP 119

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +  +F  FEE P+AS SIAQVH A +             V VKV  P + ++IRRD  ++
Sbjct: 120 IESLFASFEETPMASASIAQVHGAVMH--------DGRRVVVKVVRPNIEKAIRRDVELM 171

Query: 340 NLAAKISSVI-PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
            + A+++    P  K LR  E V ++   ++ ++DL REAA+ S+   NF     +  P+
Sbjct: 172 YVIAELTERYWPEGKRLRPVEVVAEYEQTILDELDLLREAANASQIRRNFENSNVLYMPE 231

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +      V+V    QG  VS  V  L+        LA  G       +   NF HADM
Sbjct: 232 VFWDYCRKDVMVMERIQGVPVSD-VATLKALGVDLKLLAERGVEIFFTQVFRHNFFHADM 290

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI + V+           + P  + +D G+   LS  D+  L E F A   RD    
Sbjct: 291 HPGNIFIDVSDP---------ADPSYLAVDFGIVGTLSPADQRYLAENFYAFFNRDYARV 341

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHR 573
           AE    L  +     P   I E++ A        +  P  D+      + +L +  RR  
Sbjct: 342 AE----LHVESGWVPPDVRITELEAAIRTVCEPIFEKPLKDISF-GYVLVRLFQTARRFN 396

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           + V   +  +  T L +EG  R L P  ++  T
Sbjct: 397 MEVQPQLVLLEKTLLNIEGMGRDLYPELDLWQT 429


>gi|384136576|ref|YP_005519290.1| ABC-1 domain-containing protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius Tc-4-1]
 gi|339290661|gb|AEJ44771.1| ABC-1 domain protein [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius Tc-4-1]
          Length = 557

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 170/384 (44%), Gaps = 23/384 (5%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K GQ A+ R D+FP +L ++L++L    P  +FA  +K +E   G+ L E
Sbjct: 62  VLEKLGPTFVKLGQIASLRADVFPPELIEQLAKLQDDVPPVAFAEVRKIVEDELGQPLDE 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
           +F  F+E PV S SI QVHRA LR    G +     VAVKV+ P +   I  D  ++++L
Sbjct: 122 VFRAFDEEPVGSASIGQVHRAELR---NGDE-----VAVKVQRPDIRRKIEIDLDILMDL 173

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A              L   V++F   ++++++   EA +  R          V  P+  +
Sbjct: 174 ARLAERHFEWAAHYELTGVVEEFRHTLLNELNYTVEAHNADRLRRVHEGDSYVRIPEIYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VL   Y +G    ++ DEL         +A   THA+L  +LV    HAD HPG
Sbjct: 234 EYTTPRVLTMEYVRG-IKLQHRDELIAKGYRTDEIARRVTHAVLTQMLVHGVFHADPHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           N+ V                  ++F+D GM   LS   + +L     A+ RRD R     
Sbjct: 293 NLAVLPDHS-------------ILFMDFGMVGRLSADMKQHLAGLVIALMRRDTRAILRV 339

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVC 581
             R+    +  +      +VD     +       +   E + +L     RHRV +  ++ 
Sbjct: 340 LNRMGVVPHDIDEHRLYRDVDHLREKYYEIPLTQISLGEAVSELFAVAYRHRVRIPADLA 399

Query: 582 TVMVTTLVLEGWQRKLDPGYNVMD 605
            V    + +EG    LDP + +++
Sbjct: 400 LVGKALVTVEGVVEGLDPSFRILN 423


>gi|300714823|ref|YP_003739626.1| ubiquinone biosynthesis protein UbiB [Erwinia billingiae Eb661]
 gi|299060659|emb|CAX57766.1| Probable ubiquinone biosynthesis protein UbiB [Erwinia billingiae
           Eb661]
          Length = 545

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 175/403 (43%), Gaps = 32/403 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP +IK+GQ  +TR DLFP  +  +L+ L  +         K+ IE + G  +   
Sbjct: 61  LEQLGPVWIKFGQMMSTRRDLFPPQIADQLAMLQDRVAPFDGVLAKQQIELSLGCPVESR 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           FD F   P+AS SIAQVH A+L+    GQK     V +KV  P +   IR D  +IN  A
Sbjct: 121 FDDFMIKPLASASIAQVHTATLKEN--GQK-----VVIKVIRPDILPVIRADMKLINRMA 173

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           + +  ++P  + LR  E V  +   ++ +++L RE A+  +   NF + K +  P+    
Sbjct: 174 RWVPRLLPDGRRLRPQEVVADYEKTLIDELNLLREGANAIQLRRNFDKSKMLYVPEIFSD 233

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                +LV     G  +S  V  L+ H      LA  G       +  D+F HADMHPGN
Sbjct: 234 YGSETMLVMERIYGIPISDVV-TLEKHGVNMKLLAERGVQVFFTQVFRDSFFHADMHPGN 292

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V     +          P  I +D G+   L+K D+  L E F A   RD R  AE  
Sbjct: 293 IFVSYDHPED---------PQYIAIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE-- 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP------AECMQQLLEKVRRHRVNV 576
             L        P   +E+ +  FA     E     P         +  L    RR  + V
Sbjct: 342 --LHVDSGWVPPDTNVEDFE--FAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEV 397

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
              +  +  T L +EG  R+L P  ++  T +  L   DW K 
Sbjct: 398 QPQLVLLQKTLLYVEGIGRQLYPQLDLWKTAKPFL--EDWIKD 438


>gi|217970476|ref|YP_002355710.1| ABC transporter [Thauera sp. MZ1T]
 gi|217507803|gb|ACK54814.1| ABC-1 domain protein [Thauera sp. MZ1T]
          Length = 581

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 189/423 (44%), Gaps = 49/423 (11%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP F+K GQ  ATR DL   +   +  +L   AP   +A   + +    G  
Sbjct: 64  VRRALEEMGPTFVKLGQVLATRVDLLEPEWTAEFGKLQDSAPPAPWAAVHQQLTEDLGAP 123

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
             EIF  F+  P+A+ SIAQVHRA  R    G+      V VKVR PG+   +  D   +
Sbjct: 124 PEEIFAAFDPEPLAAASIAQVHRA--RLEDGGE------VVVKVRRPGIRPILEADLRWL 175

Query: 340 NLAAKISSVIPAVKW--LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP 397
              A+++    A +W  L   E V+QF   + +++D A E  +  R   NF  + D   P
Sbjct: 176 ARLAELAETERA-EWRVLHPREMVRQFGQSLRNELDFAGECRNAERIAENFTGYTDQDSP 234

Query: 398 -------KPVYPLVHPAVLV-ETYEQ--GE--CVSRYVDELQGHERLKSA---------L 436
                  KP     HP +++   Y Q  GE  CV  ++  + G  RL++          L
Sbjct: 235 PVVPGEEKPDADGAHPIIVIPRVYWQWTGERVCVQEFIGGISGR-RLQAVDQAGLDRKML 293

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS 496
           A  G +A+LKM++ D   HAD HPGN+              +     + F+D GM   L 
Sbjct: 294 ARRGANAVLKMIVEDGVFHADPHPGNV-------------FYLPGNRIAFIDFGMVGRLE 340

Query: 497 KTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDL 555
           +  R  L+     + R D R+  +  L  +      N +  + EV      + G P   L
Sbjct: 341 EERRDQLIRLLLGLVRNDARSVVDVMLEWTS-DGVANEQDLLLEVQSFIDRYHGVPLKQL 399

Query: 556 VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKAD 615
              A  +  L+   R+H + +  ++  ++   + LEG  R+LDPG+++ + +  LL +A 
Sbjct: 400 RLSA-MLSDLVAIPRQHHLVLPNDLSLLIKAFVTLEGLGRELDPGFDMANQVLPLLERAM 458

Query: 616 WAK 618
            A+
Sbjct: 459 HAR 461


>gi|410467168|ref|ZP_11319368.1| putative unusual protein kinase, partial [Desulfovibrio magneticus
           str. Maddingley MBC34]
 gi|409980712|gb|EKO37405.1| putative unusual protein kinase, partial [Desulfovibrio magneticus
           str. Maddingley MBC34]
          Length = 572

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 186/417 (44%), Gaps = 30/417 (7%)

Query: 195 FSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLS 254
           F   ++++P   S     RE  L + L  L   G   +K GQ  +TR DL   +L  +LS
Sbjct: 55  FLKDLLVSPSGASLATLTREERLRLALTEL---GGTAVKLGQILSTRADLVGPELAAELS 111

Query: 255 ELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKV 314
           +L +          ++T+  A G  + E+F+ F+  P+AS SI QVHRA L         
Sbjct: 112 KLRADTEPDPPEAVERTVREALGAPVEELFESFDPVPMASASIGQVHRARL--------A 163

Query: 315 KPIVVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESV---QQFAVFMMSQ 371
               V VKVRH G+ E +R D  I+   A+++     V  LRL + +    +    ++ +
Sbjct: 164 DGTAVVVKVRHAGIEERVRADLDILMGLAELAER--GVVELRLYQPLAVATEMRRTILRE 221

Query: 372 VDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGH-E 430
           +D  RE  +L  F  NF     V+FP+P        VL      G+ +SR   EL     
Sbjct: 222 LDFVREERNLRHFAANFASEPGVAFPRPYPERCAREVLTMEELVGQPLSRLAGELSPEAA 281

Query: 431 RLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVG 490
             ++A+A +     L+M+  DNF HAD HPGN+LV    +                LD G
Sbjct: 282 ARRTAMARLAADVFLEMIFRDNFFHADPHPGNLLVLPGDRLG-------------ILDCG 328

Query: 491 MTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGT 550
           M   + +  R  + +   AVA  D     E  +R+ +     +  A   +V++  A + +
Sbjct: 329 MVGRIDERTRRAMEDALLAVAEGDAEGLTEQVMRIGRLPPGLDRAALRADVEDFVADYAS 388

Query: 551 PEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
            E         M  +   VRRH + +   V  ++   +VLEG  R L PG++++D +
Sbjct: 389 QELGAFDLGGAMADVAAIVRRHGILLPPVVAHLIKVFVVLEGASRTLSPGFSLIDVI 445


>gi|315225877|ref|ZP_07867665.1| conserved hypothetical protein [Parascardovia denticolens DSM 10105
           = JCM 12538]
 gi|315120009|gb|EFT83141.1| conserved hypothetical protein [Parascardovia denticolens DSM 10105
           = JCM 12538]
          Length = 561

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 189/418 (45%), Gaps = 58/418 (13%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + +E  GP F+K GQ  + R ++ P D C +L++L S A    FA  ++ + R + + +S
Sbjct: 58  KAMEELGPTFVKVGQILSMRSEILPEDYCSELAKLKSDADPMPFALVEQVLSREYSKPVS 117

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-- 339
           ++F      P+ S S+AQVHRA+L     G+      VA+KV+ PGV E++ +D  II  
Sbjct: 118 QVFSSINPKPLGSASLAQVHRATL---VTGED-----VAIKVQRPGVRETMAQDIEIIRS 169

Query: 340 --NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP 397
             N A K++S     + +     V +      S+ D   EA +L  F      +  +  P
Sbjct: 170 VANTATKVAS--ENTQIVDFMGVVNELWETFQSETDFMIEAKNLQEFKAFADGFAYMDCP 227

Query: 398 KPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSA---LAHIGTHALLKMLLVDN-- 452
           +P   L    VLV  Y  G  +S+        +RL+     L  IGT       LVDN  
Sbjct: 228 RPYLDLCTQHVLVMDYIDGIAISQ-------TKRLQEEGYDLTEIGTK------LVDNYA 274

Query: 453 -------FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE 505
                  F HAD H GNI++R  Q              ++ +D+GM   ++   R  L +
Sbjct: 275 TQVLDAGFFHADPHSGNIIIRGGQ--------------IVLIDLGMVGRINGEMRSILKQ 320

Query: 506 FFKAVARRDGRTAAECTLRL----SKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAEC 561
              AV ++D  T  E  LRL    S  QN  +    + ++D   A +G  + D +  A+ 
Sbjct: 321 MIFAVPQKDSVTLQEGLLRLADISSTGQNV-DRATLLADIDLIIADYGDVDLDELDIAKF 379

Query: 562 MQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           +  ++    R+ + + G + TV  + + LEG    L P  N+++ +   +L +   K 
Sbjct: 380 IMSMIRLASRNNLKLPGTITTVARSLVTLEGLIDDLMPQANMIEIITQHVLTSRSVKG 437


>gi|407689248|ref|YP_006804421.1| protein kinase [Alteromonas macleodii str. 'Balearic Sea AD45']
 gi|407292628|gb|AFT96940.1| protein kinase [Alteromonas macleodii str. 'Balearic Sea AD45']
          Length = 542

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 179/401 (44%), Gaps = 27/401 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSE 282
           L+  GP FIK+GQ  +TR DL P  +  +L+ L  K P  S    +  I++A G   LSE
Sbjct: 58  LQNLGPVFIKFGQMLSTRRDLLPPAIANELARLQDKVPPFSSDAAQDIIKQALGLSDLSE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
           +F  FE+AP+AS SIAQVH A L+            V VKV  P + ++I  D  ++ +L
Sbjct: 118 LFSEFEKAPLASASIAQVHAAKLKHNNED-------VVVKVLRPDIRDTIVADMELLFSL 170

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +   +P  K LR  E V ++   ++ ++DL RE+A+  +   NF     +  PK   
Sbjct: 171 ANVLQRWLPDGKRLRPVEVVVEYRKTIVDELDLLRESANGIQLGRNFEGSDALYVPKIYS 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VLV     G  +S  +D L         LA  G       +  D+F HADMHPG
Sbjct: 231 DYCRSNVLVMERIYGLPISN-IDALLTQNTNMKKLAERGVEVFFTQVFRDSFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V     ++         P  I +D G+   L++ D+  L E F A   RD R  A+ 
Sbjct: 290 NIFVSTEHPEN---------PKYIAIDFGIVGTLNREDKRYLAENFIAFFNRDYRKVAQL 340

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
                 + +  N    +  I  V E    +  P  ++      + QL    RR  + V  
Sbjct: 341 HADSGWVPQDTNIDEFEMAIRTVCE--PIFQKPLAEISF-GNVLLQLFNTARRFNMVVQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
            +  +  T L +EG  R+L P  ++  T +  L   +W K 
Sbjct: 398 QLVLLQKTLLYIEGLGRQLYPQLDLWKTAKPFL--ENWMKE 436


>gi|21242487|ref|NP_642069.1| ubiquinone biosynthesis protein [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|381169485|ref|ZP_09878650.1| 2-polyprenylphenol 6-hydroxylase [Xanthomonas citri pv.
           mangiferaeindicae LMG 941]
 gi|21107935|gb|AAM36605.1| ubiquinone biosynthesis protein [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|380690075|emb|CCG35137.1| 2-polyprenylphenol 6-hydroxylase [Xanthomonas citri pv.
           mangiferaeindicae LMG 941]
          Length = 558

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 175/400 (43%), Gaps = 53/400 (13%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP F+K GQ  ATR DL P +  ++LSEL +  P   F   +  +  A G  
Sbjct: 63  VRRALEELGPTFVKLGQVLATRVDLLPPEWIEELSELQNAVPALPFDQIRPQLVAALGME 122

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VI 338
              +F   +E P+A+ S+AQ HRA L        V    V +K+R P +G++I  D  ++
Sbjct: 123 PESVFARLDEQPLAAASLAQTHRAWL--------VDGTPVVLKIRRPDIGDTIDADLRLL 174

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA  + +  P +K  R  E VQQF V +  ++D A E  +  R   NF     V    
Sbjct: 175 ARLAEIVETRAPDLKRYRPSEVVQQFTVSLRRELDFAAEGRNAERIAANFAHDAQV---- 230

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERL--------KSALAHIGTHALLKMLLV 450
                V PAV  E   +   V  ++D + G + L        + ALA  G   +LKM+L 
Sbjct: 231 -----VVPAVYWEWTSESLNVQEFIDGIPGRDLLAVDAAGLDRRALARAGAGIVLKMVLQ 285

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV 510
           D   HAD HPGNI              +     +  +D GM   +S+  R  + +    +
Sbjct: 286 DGCFHADPHPGNI-------------FYLRDGRIAVIDFGMVGRVSEQRRFQVAQLLHGM 332

Query: 511 ARRDGRTA-------AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQ 563
              D           A  +L + + +   +  AF++E      + G P  +L      + 
Sbjct: 333 VSYDAEAVIDVLLEWAGTSLEIDEARLQQDIGAFVDE------YRGVPLKEL-RIGAMLG 385

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
            +   +R H + +  ++  ++   L LEG  R+LDP +++
Sbjct: 386 DVTSILRDHGLTLPSDLALMIKAFLTLEGMGRQLDPDFDM 425


>gi|398865122|ref|ZP_10620645.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM78]
 gi|398243861|gb|EJN29438.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM78]
          Length = 534

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 179/395 (45%), Gaps = 31/395 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP FIK+GQ  +TR DL P D+  +L  L  + P      + K IE   G+++SE+
Sbjct: 63  LQDLGPIFIKFGQILSTRRDLLPEDIADELMMLQDRVPPFDSQVSVKLIEEQLGKKISEV 122

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD----FVII 339
           F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D    F++ 
Sbjct: 123 FSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPIIAQDLAWLFILA 174

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             A K+S+     + L   + VQ +   +  ++DL REAA+ S+   NF     +  P+ 
Sbjct: 175 RAAEKLSA---DARLLHPVDVVQDYEKTIYDELDLLREAANASQLKRNFDGSPLLYVPQV 231

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
            +    P VLV     G  V+           +K  LA  G       +  D+F HADMH
Sbjct: 232 YWDWCRPKVLVMERIYGIQVTDLATLADQRTDMK-ILAERGVEIFFTQVFRDSFFHADMH 290

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGNI V   Q  S         P  I +D G+   L+  D+  L     A  +RD R  A
Sbjct: 291 PGNIFVSTVQPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVA 341

Query: 520 ECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
           +  +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V
Sbjct: 342 QLHIDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEV 398

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 399 QPQLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|294786335|ref|ZP_06751589.1| putative ABC1 domain protein [Parascardovia denticolens F0305]
 gi|294485168|gb|EFG32802.1| putative ABC1 domain protein [Parascardovia denticolens F0305]
          Length = 571

 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 189/418 (45%), Gaps = 58/418 (13%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + +E  GP F+K GQ  + R ++ P D C +L++L S A    FA  ++ + R + + +S
Sbjct: 68  KAMEELGPTFVKVGQILSMRSEILPEDYCSELAKLKSDADPMPFALVEQVLSREYSKPVS 127

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-- 339
           ++F      P+ S S+AQVHRA+L     G+      VA+KV+ PGV E++ +D  II  
Sbjct: 128 QVFSSINPKPLGSASLAQVHRATL---VTGED-----VAIKVQRPGVRETMAQDIEIIRS 179

Query: 340 --NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP 397
             N A K++S     + +     V +      S+ D   EA +L  F      +  +  P
Sbjct: 180 VANTATKVAS--ENTQIVDFMGVVNELWETFQSETDFMIEAKNLQEFKAFADGFAYMDCP 237

Query: 398 KPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSA---LAHIGTHALLKMLLVDN-- 452
           +P   L    VLV  Y  G  +S+        +RL+     L  IGT       LVDN  
Sbjct: 238 RPYLDLCTQHVLVMDYIDGIAISQ-------TKRLQEEGYDLTEIGTK------LVDNYA 284

Query: 453 -------FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE 505
                  F HAD H GNI++R  Q              ++ +D+GM   ++   R  L +
Sbjct: 285 TQVLDAGFFHADPHSGNIIIRGGQ--------------IVLIDLGMVGRINGEMRSILKQ 330

Query: 506 FFKAVARRDGRTAAECTLRL----SKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAEC 561
              AV ++D  T  E  LRL    S  QN  +    + ++D   A +G  + D +  A+ 
Sbjct: 331 MIFAVPQKDSVTLQEGLLRLADISSTGQNV-DRATLLADIDLIIADYGDVDLDELDIAKF 389

Query: 562 MQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           +  ++    R+ + + G + TV  + + LEG    L P  N+++ +   +L +   K 
Sbjct: 390 IMSMIRLASRNNLKLPGTITTVARSLVTLEGLIDDLMPQANMIEIITQHVLTSRSVKG 447


>gi|392939280|ref|ZP_10304924.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter siderophilus
           SR4]
 gi|392291030|gb|EIV99473.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter siderophilus
           SR4]
          Length = 558

 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 173/386 (44%), Gaps = 27/386 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK GQ  +TR D+ P+D+ K+L +L  K P  SF   K  I+  FG  L E 
Sbjct: 60  LEELGPTFIKMGQILSTRSDILPKDIIKELEKLQDKVPAFSFDEVKSVIQNEFGESLEEA 119

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           +  FE  P+A+ SIAQVH+A L   + G+      V VKV+ PG+ + I +D  I+   A
Sbjct: 120 YAEFEPTPLAAASIAQVHKALL---WSGK-----TVVVKVQRPGIEKIIAQDMRILEDIA 171

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           K + +     K     + V+ F   +  ++D   E  +  +F  NF + K V  P  ++ 
Sbjct: 172 KFVDNHTKYGKIYNFTKMVEDFKKRLEEELDFRIEGENAEKFKKNFLKDKKVKIPSIIWT 231

Query: 403 LVHPAVLVETYEQGECVSRY--VDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                VL   Y  G  ++ +  +DE  G +R   A+A     ++L  +L D F H D HP
Sbjct: 232 HTTRRVLTMEYIGGIPLNDFNAIDE-AGLDR--GAIARNLAKSVLNQILRDGFFHGDPHP 288

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI+V                  + FLD GM   LS   +    +    +  ++ R   E
Sbjct: 289 GNIMV-------------LGDGTIAFLDFGMVGSLSPERKRQFSKMLLGIVYKNSRMITE 335

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
             + L+      N K   ++++     +     + +   E +  + + V  + + +    
Sbjct: 336 SIIDLNAVTLNVNMKKLEKDINNLRDRYVEIPLEKLKVGEVLNGIFDLVFSYNIVIPNEF 395

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDT 606
             +  + + LEG   KLDP  +V++ 
Sbjct: 396 NMLAKSLITLEGIVEKLDPKISVLEV 421


>gi|410612853|ref|ZP_11323924.1| probable ubiquinone biosynthesis protein ubiB [Glaciecola
           psychrophila 170]
 gi|410167536|dbj|GAC37813.1| probable ubiquinone biosynthesis protein ubiB [Glaciecola
           psychrophila 170]
          Length = 531

 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 184/401 (45%), Gaps = 27/401 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSE 282
           L+T GP FIK+GQ  +TR DL P ++  +LS L  +         K+ I ++ G  +LS+
Sbjct: 46  LQTLGPVFIKFGQMLSTRKDLLPPEVATELSILQDQVEPFDPELAKQIILQSLGLEKLSD 105

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  FE  P+AS SIAQVH A L+    G +     V VKV  P + ++I+ D  ++  A
Sbjct: 106 LFSEFETKPLASASIAQVHAAKLK---DGNQ----DVVVKVIRPNIQQTIQSDIELMRTA 158

Query: 343 AK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +  ++P  K LR  E V+++   ++ ++DL  EAA+  +F  NF     +  P    
Sbjct: 159 ASALQKLLPDGKRLRPVEVVKEYERTIIDELDLTHEAANGMQFKRNFENSTALYVPTIYS 218

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
              H  V+V     G  +S  + +L         LA  G       +  D+F HADMHPG
Sbjct: 219 DYSHKNVMVMERIYGTPISD-IKQLVARNTNMKRLAERGVEVFFTQVFRDSFFHADMHPG 277

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V              + P  I +D G+   L+  D+  L E F A   R+ R  A+ 
Sbjct: 278 NIFVSTVNP---------NDPQYITIDFGIVGTLNSEDKRYLAENFIAFFNRNYRKVAQL 328

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +    +  + +A I +V E    +  P  + +  +  + QL    RR  + +  
Sbjct: 329 HVDSGWVPSDTDIDDFEASIRKVCE--PIFQKPLAE-IEFSNVLLQLFNTARRFNMVIQP 385

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
            +  +  T L +EG  R+L P  ++  T +  L   +W K 
Sbjct: 386 QLVLLQKTLLYIEGLGRQLYPQLDLWKTAKPFL--ENWMKE 424


>gi|359396237|ref|ZP_09189289.1| putative ubiquinone biosynthesis protein ubiB [Halomonas
           boliviensis LC1]
 gi|357970502|gb|EHJ92949.1| putative ubiquinone biosynthesis protein ubiB [Halomonas
           boliviensis LC1]
          Length = 524

 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 173/400 (43%), Gaps = 26/400 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           +LE  GP FIK+GQ  +TR DL P D+  +L  L  + P          +E+A    L E
Sbjct: 40  SLEALGPIFIKFGQMLSTRRDLLPADIADELKRLQDQVPPFPGEQAAARVEKALEMSLEE 99

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
            F  F+  P+AS SIAQVH A L   + G+      V VK+  PG+   +R+D  ++   
Sbjct: 100 AFAEFDRVPLASASIAQVHAARL---HGGED-----VVVKIIRPGIDRVMRQDMALMYQV 151

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           AK+ S IP  + LR  E ++ +   +  ++DL +EAA+ S+   NF+    +  P   +P
Sbjct: 152 AKLFSKIPEARRLRPVEVIRDYEATLFDELDLYKEAANTSQLKRNFKDSPLLFVPTIYWP 211

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                V+V+   +G  V+  +D L         LA  G       +  DNF HADMHPGN
Sbjct: 212 FTRRHVMVQERIRGIPVAD-LDTLIARGTNLKKLAERGVELFFTQVFRDNFFHADMHPGN 270

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V                P  I +D G+   L++ D+  L     A   +D    A   
Sbjct: 271 IFVNCDNP---------DDPQYIAIDCGIVGSLTREDQDYLARNLLAFFHQDYYEVAALH 321

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    + +        A I  V E       P  D+    + +  L +  RR  + V   
Sbjct: 322 IESGWVGENTRANEFAAAIRTVCEPIL--EKPLKDISF-GQVLLGLFQTARRFNMEVQPQ 378

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           +  +  T L +EG  R+L P  ++  T +  L    W K 
Sbjct: 379 LVLLQKTLLNIEGLGRQLYPDLDLWSTAKPYL--EQWMKD 416


>gi|325924504|ref|ZP_08186023.1| 2-octaprenylphenol hydroxylase [Xanthomonas gardneri ATCC 19865]
 gi|325544999|gb|EGD16334.1| 2-octaprenylphenol hydroxylase [Xanthomonas gardneri ATCC 19865]
          Length = 558

 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 107/392 (27%), Positives = 174/392 (44%), Gaps = 37/392 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP F+K GQ  ATR DL P++  ++LSEL +  P   F   +  +  A G  
Sbjct: 63  VRRALEELGPTFVKLGQVLATRVDLLPQEWIEELSELQNAVPALPFEQIRPQLVAALGAE 122

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VI 338
              +F   +E P+A+ S+AQ HRA L    P        V +K+R PG+G++I  D  ++
Sbjct: 123 PESVFARLDEHPLAAASLAQTHRAWLADGTP--------VVLKIRRPGIGDTIDADLRLL 174

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA  + +  P +K  R  E VQQF V +  ++D A E  +  R   NF    +V  PK
Sbjct: 175 ARLAEIVEARAPDLKRYRPAEVVQQFTVSLRRELDFAAECRNAERIAANFANDPNVVVPK 234

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +     ++ V+ +  G    R +  +      + ALA  G   + KM+L D   HAD 
Sbjct: 235 VYWEWTCDSLNVQEFIDG-IPGRDLAAVDAAGLDRKALARTGAGIVFKMVLQDGCFHADP 293

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI              +     +  +D GM   +S+  R  + +    +   D    
Sbjct: 294 HPGNI-------------FYLRDGRIAVIDFGMVGRVSEQRRFQVAQLLHGMVSYDAEAV 340

Query: 519 -------AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRR 571
                  A   L + + +   +  AF++E      + G P  +L      +  +   +R 
Sbjct: 341 IDVLLEWAGTNLDVDESRLQQDIGAFVDE------YRGVPLKEL-RIGAMLGDVTSILRD 393

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           H + +  ++  ++   L LEG  R+LDP +++
Sbjct: 394 HGLTLPSDLALMIKAFLTLEGMGRQLDPDFDM 425


>gi|418292395|ref|ZP_12904336.1| ubiquinone biosynthesis protein UbiB [Pseudomonas stutzeri ATCC
           14405 = CCUG 16156]
 gi|379063819|gb|EHY76562.1| ubiquinone biosynthesis protein UbiB [Pseudomonas stutzeri ATCC
           14405 = CCUG 16156]
          Length = 536

 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 181/394 (45%), Gaps = 29/394 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK+GQ  +TR DL P D+ ++L+ L  + P    A     IER  G  + EI
Sbjct: 64  LEGLGPIFIKFGQILSTRRDLLPPDIAEELAMLQDRVPPFDSAVATALIERQLGAPVGEI 123

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  P+AS S+AQVH A LR    G++V   VV   +R P + + +   F++ N A 
Sbjct: 124 FARFDSKPLASASVAQVHAAKLR---SGEEVVVKVVRPNLR-PIISQDLAWLFMLANSAE 179

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
           +IS      + L L E V  +A  +  ++DL REAA+ S+   NF     +  P+  +  
Sbjct: 180 RISV---DARRLHLVEVVDDYAKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYWDY 236

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKS---ALAHIGTHALLKMLLVDNFIHADMHP 460
             P VLV     G  V+    ++ G +R  +    LA  G       +  D+F HADMHP
Sbjct: 237 CRPQVLVMERIYGVPVT----DMAGLKRQNTDMRQLAERGVEIFFTQVFRDSFFHADMHP 292

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V   Q  S         P  I +D G+   L+  D+  L     A  +RD R  A+
Sbjct: 293 GNIFVSTHQPWS---------PQYIAVDFGIVGSLTPEDQDYLARNLMAFFKRDYRKVAQ 343

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V 
Sbjct: 344 LHIDSGWVPAETKVNEFEAAIRTVCE--PIFEKPLKDISF-GQLLVRLFQVARRFNMEVQ 400

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 401 PQLVLLQKTLLNIEGLGRELYPDLDLWSTGQPYL 434


>gi|226323311|ref|ZP_03798829.1| hypothetical protein COPCOM_01083 [Coprococcus comes ATCC 27758]
 gi|225208501|gb|EEG90855.1| ABC1 family protein [Coprococcus comes ATCC 27758]
          Length = 514

 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 191/409 (46%), Gaps = 42/409 (10%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP +IK GQ  +   D+ P+  C++L  LHS+     F    + I +++G   +E+
Sbjct: 23  LEDLGPTYIKLGQIMSLHSDILPKSYCEELMRLHSEVTPMPFEQVAEVIRKSYGYEWNEV 82

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F   +  P+ S SIAQVHRA L+    G+      V VKV+  G+ + + RD  +++ AA
Sbjct: 83  FQSIDVHPLGSASIAQVHRAVLK---TGED-----VVVKVQRQGIYKVMSRDISLLHKAA 134

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF---PKPV 400
           K+         + ++  + +       +++   EAA +  F    +R +DV+F   P+  
Sbjct: 135 KLVPPGTIKDMVDINMVLDELWTVTQQEMNFLLEAASMEEFA---QRNQDVAFVTTPRLY 191

Query: 401 YPLVHPAVLVETYEQGECVSRYVDEL-QGHERLKSALAHIGTHAL---LKMLLVDNFIHA 456
                  VLV  Y  G  ++   + L  G++     L  IGT  +   ++ ++ D F HA
Sbjct: 192 REYTTNHVLVMEYIDGFAINDKENLLANGYD-----LNEIGTKLVDNYIRQVMEDGFFHA 246

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           D HPGN+ +R  +              ++++D+GM   L++ DR  +    K VA  D  
Sbjct: 247 DPHPGNVRIRDGK--------------IVWIDMGMMGRLTERDREQISNAVKGVAENDIG 292

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
              E  + L + +  P+     E+++   A +GT +   +  AE MQ L+E ++ +++++
Sbjct: 293 LIQEAVMALGEFRGKPDQSKLYEDINNLMAKYGTIDMGDIDIAEVMQDLMEVMKENKISM 352

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL-----QTLLLKADWAKSL 620
              +  +      +EG   ++ P  N+++       ++ L K  W K +
Sbjct: 353 PHGLTMLARGLANMEGVLAEISPQINMVEIAAARMKESFLTKEQWKKEI 401


>gi|168701632|ref|ZP_02733909.1| ABC transporter [Gemmata obscuriglobus UQM 2246]
          Length = 563

 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 122/398 (30%), Positives = 183/398 (45%), Gaps = 23/398 (5%)

Query: 213 RELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTI 272
           RE+ + +VL  L   G  FIK+GQ  +TR DL    L  +L+ L S+ P   F+ T+ T+
Sbjct: 58  REVRIRLVLTEL---GTTFIKFGQVLSTRRDLIGPALGDELATLQSRVPADPFSVTRATV 114

Query: 273 ERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESI 332
           E    + L  +F  FE  P+AS SI QVHRA+LR    G++     VAVKV+HP +   +
Sbjct: 115 ETELRQPLEALFAAFEPEPLASASIGQVHRATLR---DGRR-----VAVKVQHPDITHRV 166

Query: 333 RRD-FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRW 391
             D  ++  LAA     +P  K  R    V +F   +  ++D  RE  HL  F   F   
Sbjct: 167 ENDLAILAELAALAEEYLPEFKAYRPVAVVAEFERVLTRELDFRRELRHLQLFRQAFAHD 226

Query: 392 KDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVD 451
             V FP+P   L    VL     +G   +R  DE++       ALA  G  A L M+  D
Sbjct: 227 PGVRFPEPHPSLSSGRVLTMELFEGVPFNRP-DEVRAAGGDFEALARAGARAFLDMIFRD 285

Query: 452 NFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVI-FLDVGMTAELSKTDRVNLVEFFKAV 510
              HAD HPGN+L               S+P  I  +DVGM   + +  R  +     AV
Sbjct: 286 GLFHADPHPGNLLYLPP---------IGSQPAAIGLIDVGMVGRIDERLRGIIDRGVGAV 336

Query: 511 ARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVR 570
             +D  T  E  ++        +  A   EV +  AF+     +       + +L + +R
Sbjct: 337 LMKDSATVTELIVQTGDVPAGFDAGALESEVADQLAFYHGMPLEQFELGTALNELTDAIR 396

Query: 571 RHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
           R+ V +   +  ++   ++LEG  R L PG+N+++ L 
Sbjct: 397 RYHVMLPAPLALLLRVLVMLEGTGRILAPGFNLVELLD 434


>gi|56710270|dbj|BAD80990.1| 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway
           [uncultured bacterium]
          Length = 580

 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 180/413 (43%), Gaps = 40/413 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP F+K GQ  ATR DLF  +   +  +L   AP   +A  ++ +    G  
Sbjct: 64  VRRALEEMGPTFVKLGQVLATRVDLFEPEWIAEFGKLQDSAPPAPWADVRQQLIEDLGAP 123

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
             E+F  F+  P+A+ S+AQV+RA L     G +     V VKVR PG+   I  D   +
Sbjct: 124 PEEVFAAFDPVPLAAASVAQVYRARLE---DGSE-----VVVKVRRPGIRPVIEADLRWL 175

Query: 340 NLAAKIS-SVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
              A+I+    P ++  R  E V+QF   +  ++D A E  +  R   NF  + D   P 
Sbjct: 176 ARLAEIAEGESPELRAFRPQEVVRQFTQSLRRELDFAGECRNAERIAENFAGFSDQDVPA 235

Query: 399 PVY---PLVHPAVLV--ETYEQ--GE--CVSRYVDELQGHERL--------KSALAHIGT 441
                 P   P ++V    Y Q  GE  CV  +++ + G            +  LA  G 
Sbjct: 236 DATAPEPSATPPIIVIPRVYWQWTGERVCVQEFINGIPGRNLAAVDTAGLDRKILARRGA 295

Query: 442 HALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRV 501
           HA+LKM++ D F HAD HPGN+              +     + F+D GM   L++  R 
Sbjct: 296 HAVLKMIVEDGFFHADPHPGNV-------------FYLPGNRIAFIDFGMVGRLTEERRD 342

Query: 502 NLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAEC 561
            L+     + + + R  A+  L  +           +E       + G     L      
Sbjct: 343 QLIRLLLGLVKHEPRRVADVMLDWTGDGAIDEDGLMLEIQAFVDQYHGVALKQL-RLGSM 401

Query: 562 MQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           +  L+  VR+HR+ +  ++  ++   + LEG  R+LDP +++      LL +A
Sbjct: 402 LSDLMAIVRQHRLALPSDLSLLVKAFITLEGMGRELDPDFDMAGEAMPLLEQA 454


>gi|158338699|ref|YP_001519876.1| hypothetical protein AM1_5607 [Acaryochloris marina MBIC11017]
 gi|158308940|gb|ABW30557.1| ABC-1 domain protein [Acaryochloris marina MBIC11017]
          Length = 576

 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 171/394 (43%), Gaps = 37/394 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           +  TL   GP FIK GQ  +TR DLFP +  ++LS+L  + P  S+   ++ IE+ FGR 
Sbjct: 76  IRETLLDLGPTFIKVGQLFSTRADLFPAEYVEELSKLQDRVPAFSYEIVERIIEKDFGRT 135

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           + E+F  F+  P+A+ S+ QVHRA L+    G++     V VK++ PG+ +    D  I+
Sbjct: 136 IPELFCSFDPVPLAAASLGQVHRAQLQ---SGEE-----VVVKIQRPGLKKLFDIDLRIL 187

Query: 340 NLAAKI----SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS 395
              A          P   WL + E   +    +  ++D   E  +  +F  NFR  + V 
Sbjct: 188 KGIAHYFQNHPKWGPGRDWLGIYEECCK---ILYEEIDYLNEGRNADQFRRNFREQEWVY 244

Query: 396 FPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIH 455
            P+  +    P VL   Y  G  +S Y D +      +  +A +   A L  LL D F H
Sbjct: 245 VPRVFWRYATPRVLTLEYVPGLKISNY-DAIDAAGIDRKRIAQLSAKAYLYQLLTDGFFH 303

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
           AD HPGN+ V      SS  +L       IF D GM  +++   R  L++ F   A++D 
Sbjct: 304 ADPHPGNLAV------SSDGKL-------IFYDFGMMGQITTLTREKLLKTFFGFAQKDA 350

Query: 516 RTAAECTLRLSK----QQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRR 571
                  + L          P  ++    +D    F G P  D    A+    L E    
Sbjct: 351 NKVIASLIDLGALLPVDDMGPIRRSIQYMLDN---FMGQP-FDKQSVAQIGDDLFEIAYD 406

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
                      VM     LEG  R LDP +N M+
Sbjct: 407 QPFRFPATFTFVMRAFSTLEGVGRGLDPTFNFME 440


>gi|322516760|ref|ZP_08069667.1| ABC1 domain protein [Streptococcus vestibularis ATCC 49124]
 gi|322124701|gb|EFX96151.1| ABC1 domain protein [Streptococcus vestibularis ATCC 49124]
          Length = 525

 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 188/410 (45%), Gaps = 36/410 (8%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           +  E  GP+F+K GQ  +TR DL P +  K+LS+L S  P  +       I+R     LS
Sbjct: 39  QAFEQLGPSFVKIGQILSTRSDLLPENYIKELSKLQSSVPPLNKEEVMTAIKRELPNGLS 98

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           + F  F E P+ASGS+AQ HRA L     GQ+     V +K++ PG+ + ++ D   I L
Sbjct: 99  DSFLDFSEEPLASGSVAQTHRARL---LSGQE-----VIIKIQRPGIDKVVKED---IQL 147

Query: 342 AAKISSVIPA--VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             K++  IP   +  + + E ++     ++ ++D   EA  + RF  N R    +  P+ 
Sbjct: 148 LIKLARHIPKHFIPMVDVQEVLENLRETLIKELDFRNEAEAMKRFKANNRAVACLGVPEV 207

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQ-GHERLKSALAHIGTHALL---KMLLVDNFIH 455
                 P ++VE Y  G  ++ Y   ++ G++     L  +G   +L   K +  D + H
Sbjct: 208 YDSFTRPHLIVEEYIDGIPLNDYSQLIEVGYD-----LEDVGKKLMLSFIKQVFKDGYFH 262

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
            D HPGN+LVR  +              + F+D G+  EL    R +L +   +   +D 
Sbjct: 263 GDPHPGNLLVRDGK--------------ICFIDFGIMGELEAGMRASLNDILYSFTAQDV 308

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
               +  L +++  N  N  A  ++V++    +   E   +   + ++ LL   +++ + 
Sbjct: 309 DGMTKAILSVTQFDNGLNRAALSQDVEQMLGRYSGVELGSLSMTDLLEDLLAIFQKNHLK 368

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYTID 625
               +  +  +++ +EG  R+L P  ++M   +   L+      L  T++
Sbjct: 369 ASSQITILEKSSIQIEGIFRELAPNMDLMTLAKDYFLENMGPDMLKQTLN 418


>gi|425066565|ref|ZP_18469685.1| Ubiquinone biosynthesis monooxygenase UbiB [Pasteurella multocida
           subsp. gallicida P1059]
 gi|404381353|gb|EJZ77830.1| Ubiquinone biosynthesis monooxygenase UbiB [Pasteurella multocida
           subsp. gallicida P1059]
          Length = 527

 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 176/400 (44%), Gaps = 27/400 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP +IK GQ  +TR DLFP D+  +L+ L  +         +  IE+A G  L   
Sbjct: 61  LQELGPVWIKLGQMLSTRRDLFPPDIADELALLQDQVDPFDGKIARAQIEKALGAPLETW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYP--GQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           FD F E  +AS SIAQVH A  +   P    ++    V +KV  P + + I  D   ++L
Sbjct: 121 FDEFNETALASASIAQVHTAKFKQNAPHLESRLAGKEVVLKVLRPNIQQMINAD---LSL 177

Query: 342 AAKISSVIPAVKW----LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP 397
             K++S IP +K     LR  E V+++   +  ++DL RE A+  +   NF     +  P
Sbjct: 178 MYKVASWIPRIKAEGRRLRPVEVVREYEKTLRDELDLRREMANAIQLRANFENSPMLYIP 237

Query: 398 KPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHAD 457
           +      H  V+V     G  VS  + EL  +      LA  G       +  D+F HAD
Sbjct: 238 EMYKQFCHQTVIVMERIYGIPVSN-IKELHANGTNMKLLAERGVQVFFTQVFRDSFFHAD 296

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
           MHPGNI V  A             P  I +D G+   L+  D+  L E F A   RD R 
Sbjct: 297 MHPGNIFVNRAHP---------DDPQYIGIDCGIVGRLNDHDKRYLAESFVAFFNRDYRR 347

Query: 518 AAECTLR---LSKQQNCPN-PKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
            AE  +      K  N  +  +AF E  +  FA    P  ++      +  L    R + 
Sbjct: 348 VAEMHVASGWTPKDTNIDDFEQAFREVCEPIFA---KPLSEISF-GHVLLNLFNVAREYN 403

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           + V   +  +  T L +EG  R+L P  ++ DT +  L K
Sbjct: 404 MEVQPQLVLLQKTLLYIEGLGRQLYPQLDLWDTAKPFLQK 443


>gi|384419689|ref|YP_005629049.1| 2-polyprenylphenol 6-hydroxylase [Xanthomonas oryzae pv. oryzicola
           BLS256]
 gi|353462602|gb|AEQ96881.1| 2-polyprenylphenol 6-hydroxylase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 565

 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 176/400 (44%), Gaps = 53/400 (13%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP F+K GQ  ATR DL P +  ++LSEL +  P   F   +  +  A G  
Sbjct: 70  VRRALEALGPTFVKLGQVLATRVDLLPSEWIEELSELQNAVPALPFEQIRPQLVAALGME 129

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VI 338
              +F   +E P+A+ S+AQ HRA L        V    V +K+R P +G++I  D  ++
Sbjct: 130 PESVFARLDEQPLAAASLAQTHRAWL--------VDGTPVVLKIRRPDIGDTIDADLRLL 181

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA  + +  P +K  R  E VQQF V +  ++D A E  +  R   NF        P+
Sbjct: 182 ARLAEIVETRAPDLKRYRPAEVVQQFTVSLRRELDFAAEGRNAERIAANF-----AHDPQ 236

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERL--------KSALAHIGTHALLKMLLV 450
            V P V+     E+      V  ++D + G + L        + ALA  G   +LKM+L 
Sbjct: 237 VVVPAVYWEWTCESLN----VQEFIDGIPGRDLLAVDAAGLDRKALARAGAGIVLKMVLQ 292

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV 510
           D   HAD HPGNI              +     +  +D GM   +S+  R  + +    +
Sbjct: 293 DGCFHADPHPGNI-------------FYLRDGRIAVIDFGMVGRVSEQRRFQVAQLLHGM 339

Query: 511 ARRDGRTA-------AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQ 563
              D           A  +L + + +   +  AF++E      + G P  +L      + 
Sbjct: 340 VSYDAEAVIDVLLEWAGTSLEIDEPRLQQDIGAFVDE------YRGVPLKEL-RIGAMLG 392

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
            +   +R H + +  ++  ++   L LEG  R+LDP +++
Sbjct: 393 DVTSILRDHGLTLPSDLALMIKAFLTLEGMGRQLDPDFDM 432


>gi|392422980|ref|YP_006459584.1| ubiquinone biosynthesis protein UbiB [Pseudomonas stutzeri CCUG
           29243]
 gi|390985168|gb|AFM35161.1| ubiquinone biosynthesis protein UbiB [Pseudomonas stutzeri CCUG
           29243]
          Length = 536

 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 181/391 (46%), Gaps = 23/391 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK+GQ  +TR DL P D+ ++L+ L  + P    A     IER  G  + EI
Sbjct: 64  LEGLGPIFIKFGQILSTRRDLLPPDIAEELAMLQDRVPPFDSAVATALIERQLGAPVGEI 123

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  P+AS S+AQVH A LR    G++V   VV   +R P + + +   F++ N A 
Sbjct: 124 FARFDSKPLASASVAQVHAAKLR---SGEEVVVKVVRPNLR-PIISQDLAWLFMLANSAE 179

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
           +IS  I A + L L E V  +A  +  ++DL REAA+ S+   NF     +  P+  +  
Sbjct: 180 RIS--IDARR-LHLVEVVDDYAKTIYDELDLLREAANASQLKRNFEGSALLYVPQVYWDY 236

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
             P VLV     G  V+      + +  ++  LA  G       +  D+F HADMHPGNI
Sbjct: 237 CRPQVLVMERIYGVPVTDMAGLARQNTDMRQ-LAERGVEIFFTQVFRDSFFHADMHPGNI 295

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
            V   Q  S         P  I +D G+   L+  D+  L     A  +RD R  A+  +
Sbjct: 296 FVSTHQPWS---------PQYIAVDFGIVGSLTPEDQDYLARNLMAFFKRDYRKVAQLHI 346

Query: 524 R---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
               +  +      +A I  V E    +  P  D+    + + +L +  RR  + V   +
Sbjct: 347 DSGWVPAETKVNEFEAAIRTVCE--PIFEKPLKDISF-GQLLVRLFQVARRFNMEVQPQL 403

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             +  T L +EG  R+L P  ++  T Q  L
Sbjct: 404 VLLQKTLLNIEGLGRELYPDLDLWSTGQPYL 434


>gi|452749763|ref|ZP_21949521.1| ubiquinone biosynthesis protein UbiB [Pseudomonas stutzeri NF13]
 gi|452006402|gb|EMD98676.1| ubiquinone biosynthesis protein UbiB [Pseudomonas stutzeri NF13]
          Length = 536

 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 177/392 (45%), Gaps = 25/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK+GQ  +TR DL P D+ ++L+ L  + P    A     IER  G  + EI
Sbjct: 64  LEGLGPIFIKFGQILSTRRDLLPLDIAEELAMLQDRVPPFDSAVATALIERQLGAPVGEI 123

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  P+AS S+AQVH A LR    G++     V VKV  P +   I +D   + + A
Sbjct: 124 FARFDSKPLASASVAQVHAAKLR---SGEE-----VVVKVVRPNLRPIISQDLAWLFMLA 175

Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           K +  I    + L L E V  +A  +  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 176 KTAERISIDARRLHLVEVVDDYAKTIYDELDLLREAANASQLKRNFEGSALLYVPQVYWD 235

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
              P VLV     G  V+      + +  ++  LA  G       +  D+F HADMHPGN
Sbjct: 236 YCRPQVLVMERIYGVPVTDMAGLTRQNTDMRQ-LAERGVEIFFTQVFRDSFFHADMHPGN 294

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V   Q  S         P  I +D G+   L+  D+  L     A  +RD R  A+  
Sbjct: 295 IFVSTHQPWS---------PQYIAVDFGIVGSLTPEDQDYLARNLMAFFKRDYRKVAQLH 345

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V   
Sbjct: 346 IDSGWVPAETKVNEFEAAIRTVCE--PIFEKPLKDISF-GQLLVRLFQVARRFNMEVQPQ 402

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 403 LVLLQKTLLNIEGLGRELYPDLDLWSTGQPYL 434


>gi|431929012|ref|YP_007242046.1| 2-octaprenylphenol hydroxylase [Pseudomonas stutzeri RCH2]
 gi|431827299|gb|AGA88416.1| 2-octaprenylphenol hydroxylase [Pseudomonas stutzeri RCH2]
          Length = 536

 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 181/396 (45%), Gaps = 31/396 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP FIK+GQ  +TR DL P D+ ++L+ L  + P    A     IER  G  + E
Sbjct: 63  ALEGLGPIFIKFGQILSTRRDLLPPDIAEELAMLQDRVPPFDSAVATALIERQLGASVGE 122

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD----FVI 338
           IF  F+  P+AS S+AQVH A LR    G++     V VKV  P +   I +D    F++
Sbjct: 123 IFARFDSKPLASASVAQVHAAKLR---SGEE-----VVVKVVRPNLKPIISQDLAWLFML 174

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
            N A +IS  I A + L L E V  +A  +  ++DL REAA+ S+   NF     +  P+
Sbjct: 175 ANSAERIS--IDARR-LHLVEVVDDYAKTIYDELDLLREAANASQLKRNFEGSPLLYVPQ 231

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +    P VLV     G  V+      + +  ++  LA  G       +  D+F HADM
Sbjct: 232 IYWDYCRPQVLVMERIYGVPVTDMAGLARQNTDMRQ-LAERGVEIFFTQVFRDSFFHADM 290

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI V   Q  S         P  I +D G+   L+  D+  L     A  +RD R  
Sbjct: 291 HPGNIFVSSHQPWS---------PQYIAVDFGIVGSLTPEDQDYLARNLMAFFKRDYRKV 341

Query: 519 AECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
           A+  +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + 
Sbjct: 342 AQLHIDSGWVPAETKVNEFEAAIRTVCE--PIFEKPLKDISF-GQLLVRLFQVARRFNME 398

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V   +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 399 VQPQLVLLQKTLLNIEGLGRELYPDLDLWSTGQPYL 434


>gi|397688661|ref|YP_006525980.1| ubiquinone biosynthesis protein UbiB [Pseudomonas stutzeri DSM
           10701]
 gi|395810217|gb|AFN79622.1| ubiquinone biosynthesis protein UbiB [Pseudomonas stutzeri DSM
           10701]
          Length = 536

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 180/393 (45%), Gaps = 27/393 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK+GQ  +TR DL P D+ ++L+ L  + P    A     IER  G  + E+
Sbjct: 64  LEGLGPIFIKFGQILSTRRDLLPLDIAEELAMLQDRVPPFDSAMATTLIERQLGAPVGEV 123

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  P+AS S+AQVH A LR    G++     V VKV  P +   I +D   + L A
Sbjct: 124 FARFDSKPLASASVAQVHAAKLR---SGEE-----VVVKVVRPNLKPIISQDLAWLFLLA 175

Query: 344 KIS--SVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           K +  + I A + L L E V+ +A  +  ++DL REAA+ S+   NF+    +  P+  +
Sbjct: 176 KTAERASIDARR-LHLVEVVEDYAKTIYDELDLLREAANASQLRRNFQDSPLLYVPQIYW 234

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  V+      +    +K  LA  G       +  D+F HADMHPG
Sbjct: 235 DYCRPQVLVMERIYGVPVTDMARLTEQRTDMKQ-LAERGVEIFFTQVFRDSFFHADMHPG 293

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V   Q  +         P  I +D G+   L+  D+  L     A  +RD R  A+ 
Sbjct: 294 NIFVSTQQPWN---------PQYIAVDFGIVGSLTPEDQDYLARNLMAFFKRDYRKVAQL 344

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V  
Sbjct: 345 HIDSGWVPAETKVNEFEAAIRTVCE--PIFEKPLKDISF-GQLLVRLFQVARRFNMEVQP 401

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 402 QLVLLQKTLLNIEGLGRELYPDLDLWSTGQPYL 434


>gi|91773606|ref|YP_566298.1| 2-octaprenylphenol hydroxylase [Methanococcoides burtonii DSM 6242]
 gi|91712621|gb|ABE52548.1| ABC1 family protein [Methanococcoides burtonii DSM 6242]
          Length = 559

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 177/387 (45%), Gaps = 27/387 (6%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V + LE  GP ++K+GQ  + R DL P++  ++ ++L ++ P   F   ++ +E  FG++
Sbjct: 63  VRKVLEELGPTYVKFGQLLSMRQDLIPKEYAEEFAKLQNEVPSFCFDEVERIVEEEFGKK 122

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           + +IF  F+ + +A+ SI QVHRA L        +    V VKV+ PG+ + I  D  I+
Sbjct: 123 IEDIFLSFDSSSIAAASIGQVHRAKL--------LDGTEVVVKVQRPGIRKIIGSDLDIL 174

Query: 340 -NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
            ++A      +   K     E V +    + +++D  +EA ++ RF  NF    D+  P 
Sbjct: 175 YSIAGFAEEHVEEAKLYSPVEVVDEVYHSIHAEMDYTQEARNIERFRRNFENEPDIVIPN 234

Query: 399 PVYPLVHPAVLVETYEQG-ECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHAD 457
             +      VL   Y  G +C +    E  G +R K  +A  GT A +K +  D F HAD
Sbjct: 235 VYWEYSTRRVLTMEYIDGVKCDNFKTLEEMGLDRYK--IAENGTKAFMKQIFEDGFFHAD 292

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
           MH GN+L+                  +  LD GM   +S   +  LV+   AV R D   
Sbjct: 293 MHSGNVLI-------------LEDGRICLLDFGMVGSISNEVKNLLVDALLAVTREDVTQ 339

Query: 518 AAECTLRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
             E         +  + ++F  E     + ++G     L  P E + + +  +R+ R+ +
Sbjct: 340 YLEVMRDFGMVPDELDVQSFKIEYGYILSKYYGRSLKQLDTP-EMIAETMTLLRKFRIRI 398

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNV 603
             N+  +    + + G+  ++ P +NV
Sbjct: 399 PPNIALLFKGLMTISGFALQMVPDFNV 425


>gi|392552926|ref|ZP_10300063.1| 2-octaprenylphenol hydroxylase [Pseudoalteromonas spongiae
           UST010723-006]
          Length = 536

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 178/403 (44%), Gaps = 31/403 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSE 282
           LE+ GP ++K+GQ  +TR DL P D+ K+LS L            K+ IE+A     + +
Sbjct: 58  LESLGPVWVKFGQMLSTRRDLLPPDIAKELSLLQDNVAPFDGNKAKQLIEQALELDDIHQ 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +F+ FE+ P+AS SIAQVH A L  ++ G+  +   V +KV  P + ++I  D  ++  L
Sbjct: 118 LFEQFEQTPLASASIAQVHTAQL--KHAGELHE---VVIKVIRPDIEDAIYSDLKLMAQL 172

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +S  +P  K LR  E + ++   ++ ++DL RE A+  +   NF     +  P    
Sbjct: 173 AKLVSQFMPDGKRLRPVEVINEYRKTLLDELDLQREGANAIQLKRNFEDSDSLYIPYVYS 232

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
            L    VLV     G  VS  ++ L+        LA  G       +  D+F HADMHPG
Sbjct: 233 DLSRKNVLVMERIYGIPVSD-LEALEAQNTNLQLLAERGVEVFFTQVFRDSFFHADMHPG 291

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V          R     P  I +D G+   L+K D+  L E F A   RD R  AE 
Sbjct: 292 NIFV---------SREHPENPMYIGIDCGIVGTLNKEDKRYLAENFIAFFNRDYRKVAEL 342

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP------AECMQQLLEKVRRHRVN 575
            +         N + F       FA     E     P       + +  L    RR  + 
Sbjct: 343 HVDSGWVPADTNVEEF------EFAIRTVCEPIFQKPLAEISFGQVLVNLFNTARRFNME 396

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAK 618
           V   +  +  T L +EG  R+L P  ++  T +  L   +W K
Sbjct: 397 VQPQLVLLQKTLLYIEGLGRQLYPQLDLWKTAKPFL--EEWVK 437


>gi|416955084|ref|ZP_11935768.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia sp.
           TJI49]
 gi|325522767|gb|EGD01252.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia sp.
           TJI49]
          Length = 525

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 177/393 (45%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL   D   +L++L  + P    +     IE++ G  + EI
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLSVDFANELAKLQDQVPPFDSSVAIAIIEKSLGAPVDEI 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           FD FE  P+AS SIAQVH A L+    GQ      VAVKV  P +   I  D  ++ ++A
Sbjct: 116 FDEFEREPIASASIAQVHFAKLK---QGQHAGK-AVAVKVLRPNMLPVIDSDLALMRDIA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 172 TWAERLWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWD 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VLV     G  +S+ V+ L+        LA  G       +  D F HADMHPGN
Sbjct: 232 FSTSQVLVMERMTGVPISQ-VETLRAAGVDIKKLAREGVEIFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +A     +          I LD G+   LS  D+  L + F A  +RD    A   
Sbjct: 291 IQVSLAPDTFGR---------YIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVATLH 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
           L    +     P+  +EE++ A      P  D     +   + + +L    RR  V +  
Sbjct: 342 L----ESGWVPPETRVEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 398 QLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|303248903|ref|ZP_07335151.1| ABC-1 domain protein [Desulfovibrio fructosovorans JJ]
 gi|302489702|gb|EFL49637.1| ABC-1 domain protein [Desulfovibrio fructosovorans JJ]
          Length = 560

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 189/420 (45%), Gaps = 45/420 (10%)

Query: 200 MMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSK 259
           +  P   S     R+  L + L  L   GP  IK GQ  +TR DL   DL ++L++L   
Sbjct: 47  LTGPAGGSLAAMRRDERLRLALTEL---GPTAIKLGQILSTRADLVGPDLARELAKLRDD 103

Query: 260 APEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVV 319
               +    ++TIE   G  ++++F  FEE P+AS SI Q HRA L             V
Sbjct: 104 TEPDAPETVRRTIEAELGAPMADLFPRFEETPIASASIGQAHRAML--------PDGTAV 155

Query: 320 AVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESV---QQFAVFMMSQVDLAR 376
            VKV+H G+ + +R D  I    A+++     +  LRL + +    +    ++ ++D AR
Sbjct: 156 VVKVQHAGIEDDVRADLDIAMGLAELAER--GIVHLRLYQPLAVATEIRRTILRELDFAR 213

Query: 377 EAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERL---- 432
           E  +L  F  NF     V+FP+P +P    A  V T E  E   R V EL    +     
Sbjct: 214 EEKNLRHFAANFAGDARVAFPRP-FP-ERCARRVLTME--ELSGRTVAELAAGPKTPEEN 269

Query: 433 --KSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVG 490
             +  LA        +M+  DNF HAD HPGNIL+        + RL         LD G
Sbjct: 270 AHREKLARNAADIFFEMIFRDNFFHADPHPGNILI------LGEDRLG-------LLDCG 316

Query: 491 MTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAF---IEEVDEAFAF 547
           M   + +  R  L E   AVA  D     E  +RL +     + +A    IEE    +A 
Sbjct: 317 MVGRIDERTRRALEEALLAVASGDAEAMTEQVMRLGRVPPGLDREALRADIEEFVADYAG 376

Query: 548 WGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
               E DL   +  +  ++  VRRH + +  +V  ++   +VLEG    L+PG+++++ +
Sbjct: 377 QSVGEFDL---SGALGDVMGLVRRHGILLPPSVAMLIKVFIVLEGAAATLNPGFSLIEVI 433


>gi|88861182|ref|ZP_01135815.1| 2-octaprenylphenol hydroxylase; ubiquinone biosynthesis
           [Pseudoalteromonas tunicata D2]
 gi|88816775|gb|EAR26597.1| 2-octaprenylphenol hydroxylase; ubiquinone biosynthesis
           [Pseudoalteromonas tunicata D2]
          Length = 504

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 178/401 (44%), Gaps = 24/401 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSE 282
           LE  GP +IK+GQ  +TR DL P D+ ++L+ L  K P    A  K+ IE A G   +SE
Sbjct: 25  LEHLGPVWIKFGQMLSTRQDLLPVDVAQELALLQDKVPPFEGALAKQIIETALGLNDISE 84

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
            F  F+  P+AS SIAQVH A +     GQ V+ IV  +KV  P +   I  D  ++   
Sbjct: 85  CFSEFDSTPLASASIAQVHSAKI-ITANGQ-VEEIV--IKVIRPDIEPIIHSDLYLMQDL 140

Query: 343 AKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AK++S  +P  K LR  E ++++   ++ ++DL RE A+  +   NF   + +  P    
Sbjct: 141 AKLASQFLPDGKRLRPVEVIKEYRKTLLDELDLMREGANAIQLKRNFENSEALYIPYIYS 200

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
            L    VLV     G  VS  +  L+        LA  G       +  D+F HADMHPG
Sbjct: 201 DLSRKNVLVMERIYGIPVSD-LTALKAQGTNLELLAERGVQVFFTQVFRDSFFHADMHPG 259

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V      +         P  I +D G+   L+K D+  L E F A   RD R  AE 
Sbjct: 260 NIFVSYNTPHN---------PQYIGIDCGIVGTLNKEDKRYLAENFIAFFNRDYRKVAEL 310

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +  + N    +  I  V E        E    H    +  L    RR  + V  
Sbjct: 311 HVDSGWVPAETNVEEFEFAIRTVCEPIFQKPLAEISFGH---VLVNLFNTARRFNMQVQP 367

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
            +  +  T L +EG  R+L P  ++  T +  L    W K 
Sbjct: 368 QLVLLQKTLLYVEGLGRQLYPQLDLWKTAKPFL--EQWVKD 406


>gi|114331162|ref|YP_747384.1| putative ubiquinone biosynthesis protein UbiB [Nitrosomonas
           eutropha C91]
 gi|114308176|gb|ABI59419.1| 2-octaprenylphenol hydroxylase [Nitrosomonas eutropha C91]
          Length = 504

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 179/392 (45%), Gaps = 29/392 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP  IK+GQ  +TR DL  +D   +L+ L  + P        K +E  + + ++E+
Sbjct: 56  LEALGPISIKFGQMLSTRRDLLAQDFADELAFLQDRVPPFPSEQAVKILETVYRKPVNEV 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  PVAS S+AQVH A L+    G +      AVK+  P +   I  D  ++   A
Sbjct: 116 FLEFDIKPVASASVAQVHFAVLQ---DGTQ-----AAVKILRPTIAPVIAHDVALMETGA 167

Query: 344 -KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             + S+ P  K L+L E V +FA  +  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 168 WLLESIWPDGKRLKLREVVAEFARHLDDELDLIREAANCSQLRRNFLNSPLLQVPEVYWD 227

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
             HP V+V     G  +SR V+ L+        LA +G       +  D + HADMHPGN
Sbjct: 228 YCHPEVMVMERMIGTPISR-VEILRTQGIDVPQLARMGVEIFFTQVFRDGYFHADMHPGN 286

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V              S    I +D G+   LS+ D+  L + F A  RRD R  AE  
Sbjct: 287 IFV-------------GSDGRYIAVDFGIMGTLSEQDKNYLAQNFLAFFRRDYRRVAETH 333

Query: 523 LRLS---KQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +      +     + +A I  V E    +  P  + ++    + +L +  R+  V +   
Sbjct: 334 IEAGWAPRNTRVDDFEAAIRAVCE--PIFDRPLKE-IYFGRVLLRLFQASRQFNVEIQPQ 390

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 391 LVLLQKTLLNIEGLGRDLDPDLDLWKTAKPFL 422


>gi|217968775|ref|YP_002354009.1| ABC transporter [Thauera sp. MZ1T]
 gi|217506102|gb|ACK53113.1| ABC-1 domain protein [Thauera sp. MZ1T]
          Length = 581

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 186/419 (44%), Gaps = 49/419 (11%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP F+K GQ  ATR DL   +   +  +L   AP   +A   + +    G  
Sbjct: 64  VRRALEEMGPTFVKLGQVLATRVDLLEPEWTAEFGKLQDSAPPAPWAAVHQQLTEDLGAP 123

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
             EIF  F+  P+A+ SIAQVHRA L     G +     V VKVR PG+   +  D   +
Sbjct: 124 PEEIFAAFDPEPLAAASIAQVHRARLD---DGSE-----VVVKVRRPGIRPILEADLRWL 175

Query: 340 NLAAKISSVIPAVKW--LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP 397
              A+++    A +W  L   E V+QF   + +++D A E  +  R   NF  + D   P
Sbjct: 176 ARLAELAETESA-EWRVLHPREMVRQFGQSLRNELDFAGECRNAERIAENFTGYTDQDSP 234

Query: 398 -------KPVYPLVHPAVLV-ETYEQ--GE--CVSRYVDELQGHERLKSA---------L 436
                  KP     HP +++   Y Q  GE  CV  ++  + G  RL++          L
Sbjct: 235 PVVPGEEKPDADGAHPIIVIPRVYWQWTGERVCVQEFIGGISGR-RLQAVDQAGLDRKML 293

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS 496
           A  G +A+LKM++ D   HAD HPGN+              +     + F+D GM   L 
Sbjct: 294 ARRGANAVLKMIVEDGVFHADPHPGNV-------------FYLPGNRIAFIDFGMVGRLE 340

Query: 497 KTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDL 555
           +  R  L+     + R D R+  +  L  +      N +  + EV      + G P   L
Sbjct: 341 EERRDQLIRLLLGLVRNDARSVVDVMLEWTS-DGVANEQDLLSEVQSFIDRYHGVPLKQL 399

Query: 556 VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
              +  +  L+   R+H + +  ++  ++   + LEG  R+LDPG+++ +    LL +A
Sbjct: 400 -RLSVMLSDLVAIPRQHHLALPNDLSLLVKAFVTLEGLGRELDPGFDMANQALPLLERA 457


>gi|417851788|ref|ZP_12497470.1| hypothetical protein GEW_10181 [Pasteurella multocida subsp.
           gallicida str. Anand1_poultry]
 gi|338218499|gb|EGP04265.1| hypothetical protein GEW_10181 [Pasteurella multocida subsp.
           gallicida str. Anand1_poultry]
          Length = 527

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 176/400 (44%), Gaps = 27/400 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP +IK GQ  +TR DLFP D+  +L+ L  +         +  IE+  G  L   
Sbjct: 61  LQELGPVWIKLGQMLSTRRDLFPPDIADELALLQDQVDPFDGKIARAQIEKVLGAPLETW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYP--GQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           FD F E  +AS SIAQVH A  +   P    ++    V +KV  P + + I  D   ++L
Sbjct: 121 FDEFNETALASASIAQVHTAKFKQNAPHLENRLAGKEVVLKVLRPNIQQMINAD---LSL 177

Query: 342 AAKISSVIPAVKW----LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP 397
             K++S IP +K     LR  E V+++   +  ++DL RE A+  +   NF     +  P
Sbjct: 178 MYKVASWIPRIKAEGRRLRPVEVVREYEKTLRDELDLRREMANAIQLRANFENSPMLYIP 237

Query: 398 KPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHAD 457
           +      H  V+V     G  VS  ++EL  +      LA  G       +  D+F HAD
Sbjct: 238 EMYKQFCHQTVIVMERIYGIPVSN-IEELHANGTNMKLLAERGVQVFFTQVFRDSFFHAD 296

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
           MHPGNI V  A             P  I +D G+   L+  D+  L E F A   RD R 
Sbjct: 297 MHPGNIFVNRAHP---------DDPQYIGIDCGIVGRLNDHDKRYLAESFVAFFNRDYRR 347

Query: 518 AAECTLR---LSKQQNCPN-PKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
            AE  +      K  N  +  +AF E  +  FA    P  ++      +  L    R + 
Sbjct: 348 VAEMHVASGWTPKDTNIDDFEQAFREVCEPIFA---KPLSEISF-GHVLLNLFNVAREYN 403

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           + V   +  +  T L +EG  R+L P  ++ DT +  L K
Sbjct: 404 MEVQPQLVLLQKTLLYIEGLGRQLYPQLDLWDTAKPFLQK 443


>gi|254875713|ref|ZP_05248423.1| 2-polyprenylphenol 6-hydroxylase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254841734|gb|EET20148.1| 2-polyprenylphenol 6-hydroxylase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 552

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 196/430 (45%), Gaps = 39/430 (9%)

Query: 199 IMMAPFADSFGPQFRELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELH 257
           +++ PF   + P+ R+L   V +R  LE  GP FIK+GQ  + R DL P ++ K++S+L 
Sbjct: 37  LLINPFY--YSPRVRKLEHGVRIREALEKLGPIFIKFGQALSVRADLLPPEVIKEVSKLQ 94

Query: 258 SKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPI 317
              P        + IE+A  + +++IF  FE  P+AS S+AQVH A L+     +K    
Sbjct: 95  DNVPPFDNDIAAQQIEKAAKKPINKIFKSFESTPLASASVAQVHGAVLQ---NDEK---- 147

Query: 318 VVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLARE 377
            V VKV  PG+ + ++ D  ++   A + S +  +K  +  E V++       ++DL RE
Sbjct: 148 -VVVKVLRPGIEKILKLDTSLMLFFATLLSKLKEIKRFKPVEIVKEINQSFFDELDLVRE 206

Query: 378 AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS--RYVDELQGHERLKSA 435
           A++ S+   NF        PK  +      V+V     G  VS    +D L    RL   
Sbjct: 207 ASNASQIRRNFEGSTIHYVPKIYWEYTSSTVMVMERVSGVRVSDIETLDALGVDRRL--- 263

Query: 436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL 495
           LA  G       +  D F HADMHPGN+ + V            + P  I +D G+   L
Sbjct: 264 LAQRGVEIFYSQVFDDCFFHADMHPGNMFIDVTNP---------ADPKYISIDFGIVGTL 314

Query: 496 SKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL 555
           ++ D+  L   F A  +RD R  AE  +     ++   P    E+V E+ A     E   
Sbjct: 315 NRDDQRYLAGNFLAFFKRDYRKVAELHI-----ESGWVPSDTREDVLES-AIRTVCEPIF 368

Query: 556 VHPAE------CMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQT 609
             P +       + QL    RR  +N+   +  +  T   +EG  +KL P  N+ +T + 
Sbjct: 369 EKPMKEISLGYTLMQLFAVARRFNMNIQPQLTLLQKTLFHVEGLGQKLCPELNIWETSRP 428

Query: 610 LLLKADWAKS 619
           +L K  W K 
Sbjct: 429 ILEK--WMKE 436


>gi|119896668|ref|YP_931881.1| putative ubiquinone biosynthesis protein UbiB [Azoarcus sp. BH72]
 gi|119669081|emb|CAL92994.1| probable ubiquinone biosynthesis protein [Azoarcus sp. BH72]
          Length = 509

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 178/396 (44%), Gaps = 33/396 (8%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + LE+ GP F+K+GQ  +TR DL P DL  +L+ L  + P          +E  +GR + 
Sbjct: 54  KALESLGPIFVKFGQMLSTRRDLLPPDLADELALLQDRVPPFPTEQALAVLEGFYGRPVD 113

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
            +F  FE  PVAS S+AQVH A    R P        VAVK+  PG+   I  D  ++ +
Sbjct: 114 AVFRDFERTPVASASVAQVHFA----RLPDG----TEVAVKILRPGIERVIAHDLALMEV 165

Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
            A  +    P  + L+  E V +F+ ++  ++DL REAA+ S+   NF+    +  P+  
Sbjct: 166 GAMLLDKAWPEGRRLKPREVVAEFSKYLRDELDLMREAANCSQLRRNFKDSPLLLVPEVY 225

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +     +V+V     G  +S+          LK AL+  G       +  D F HADMHP
Sbjct: 226 WDWCGRSVMVMERMHGVPISQTAAVTAQGTDLK-ALSRAGVEIFFTQVFRDGFFHADMHP 284

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V    +              I LD G+   L++ D+  L + F A  +RD +  A 
Sbjct: 285 GNIFVHADGR-------------YIALDFGIMGTLNEVDKNYLAQNFLAFFKRDYKRVAM 331

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
             +    +      K  ++E + A        +  P  D+    + + +L +  RR  + 
Sbjct: 332 AHI----EAGWVPAKTRVDEFEAAIRTVCEPIFDKPLKDISF-GKTLLRLFQTARRFEME 386

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 387 VQPQLVLLQKTLLNIEGLGRQLDPELDLWKTAKPFL 422


>gi|167626603|ref|YP_001677103.1| 2-octaprenylphenol hydroxylase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167596604|gb|ABZ86602.1| 2-octaprenylphenol hydroxylase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 552

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 196/430 (45%), Gaps = 39/430 (9%)

Query: 199 IMMAPFADSFGPQFRELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELH 257
           +++ PF   + P+ R+L   V +R  LE  GP FIK+GQ  + R DL P ++ K++S+L 
Sbjct: 37  LLINPFY--YSPRVRKLEHGVRIREALEKLGPIFIKFGQALSVRADLLPPEVIKEVSKLQ 94

Query: 258 SKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPI 317
              P        + IE+A  + +++IF  FE  P+AS S+AQVH A L+     +K    
Sbjct: 95  DNVPPFDNDIAAQQIEKAAKKPINKIFKSFESTPLASASVAQVHGAVLQ---NDEK---- 147

Query: 318 VVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLARE 377
            V VKV  PG+ + ++ D  ++   A + S +  +K  +  E V++       ++DL RE
Sbjct: 148 -VVVKVLRPGIEKILKLDTSLMLFFATLLSKLKEIKRFKPVEIVKEINQSFFDELDLVRE 206

Query: 378 AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS--RYVDELQGHERLKSA 435
           A++ S+   NF        PK  +      V+V     G  VS    +D L    RL   
Sbjct: 207 ASNASQIRRNFEGSTIHYVPKIYWEYTSSTVMVMERVSGVRVSDIETLDALGVDRRL--- 263

Query: 436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL 495
           LA  G       +  D F HADMHPGN+ + V            + P  I +D G+   L
Sbjct: 264 LAQRGVEIFYSQVFDDCFFHADMHPGNMFIDVTNP---------ADPKYISIDFGIVGTL 314

Query: 496 SKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL 555
           ++ D+  L   F A  +RD R  AE  +     ++   P    E+V E+ A     E   
Sbjct: 315 NRDDQRYLAGNFLAFFKRDYRKVAELHI-----ESGWVPSDTREDVLES-AIRTVCEPIF 368

Query: 556 VHPAE------CMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQT 609
             P +       + QL    RR  +N+   +  +  T   +EG  +KL P  N+ +T + 
Sbjct: 369 EKPMKEISLGYTLMQLFAVARRFNMNIQPQLTLLQKTLFHVEGLGQKLCPELNIWETSRP 428

Query: 610 LLLKADWAKS 619
           +L K  W K 
Sbjct: 429 ILEK--WMKE 436


>gi|359457942|ref|ZP_09246505.1| ABC-1 domain protein [Acaryochloris sp. CCMEE 5410]
          Length = 576

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 171/394 (43%), Gaps = 37/394 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           +  TL   GP FIK GQ  +TR DLFP +  ++LS+L  + P  S+   ++ IE+ FGR 
Sbjct: 76  IRETLLDLGPTFIKVGQLFSTRADLFPAEYVEELSKLQDRVPAFSYEIVERIIEKDFGRT 135

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           + E+F  F+  P+A+ S+ QVHRA L+    G++     V VK++ PG+ +    D  I+
Sbjct: 136 IPELFCSFDPVPLAAASLGQVHRAQLQ---SGEE-----VVVKIQRPGLKKLFDIDLRIL 187

Query: 340 NLAAKI----SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS 395
              A          P   WL + E   +    +  ++D   E  +  +F  NFR  + V 
Sbjct: 188 KGIAHYFQNHPKWGPGRDWLGIYEECCK---ILYEEIDYLNEGRNADQFRRNFRSQEWVY 244

Query: 396 FPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIH 455
            P+  +    P VL   Y  G  +S Y D +      +  +A +   A L  LL D F H
Sbjct: 245 VPRVFWRYATPRVLTLEYVPGLKISNY-DAIDAAGIDRKRIAQLSAKAYLYQLLTDGFFH 303

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
           AD HPGN+ V      SS  +L       IF D GM  +++   R  L++ F   A++D 
Sbjct: 304 ADPHPGNLAV------SSDGKL-------IFYDFGMMGQITTLTREKLLKTFFGFAQKDA 350

Query: 516 RTAAECTLRLSK----QQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRR 571
                  + L          P  ++    +D    F G P  D    A+    L E    
Sbjct: 351 NKVIASLIDLGALLPVDDMGPIRRSIQYMLDN---FMGQP-FDKQSVAQIGDDLFEIAYD 406

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
                      VM     LEG  R LDP +N M+
Sbjct: 407 QPFRFPATFTFVMRAFSTLEGVGRGLDPTFNFME 440


>gi|237807107|ref|YP_002891547.1| putative ubiquinone biosynthesis protein UbiB [Tolumonas auensis
           DSM 9187]
 gi|259550893|sp|C4L962.1|UBIB_TOLAT RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|237499368|gb|ACQ91961.1| 2-polyprenylphenol 6-hydroxylase [Tolumonas auensis DSM 9187]
          Length = 543

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 174/395 (44%), Gaps = 29/395 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
             E  GP FIK+GQ  +TR DL P DL ++L+ L  + P       ++ IE+A G+ +  
Sbjct: 60  AFEGLGPVFIKFGQMLSTRRDLLPPDLAEELAMLQDRVPSFDGQLAREQIEQALGQPIEA 119

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F++ P+AS S+AQVH A L       K     + +KV  P +   I  D  ++ L 
Sbjct: 120 LFADFDQQPLASASVAQVHTARL-------KENNAEIVIKVIRPDIKPVINDDIRLMRLC 172

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           AKI + +     LR  E ++++   ++ +++L  EAA+  +   NF     +  P     
Sbjct: 173 AKIVAFLIPNNRLRPVEVIEEYRRTLLDELNLMSEAANAIQLRRNFENSSHLYVPLVYSD 232

Query: 403 LVHPAVLVETYEQGECVS-RYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               +VLV     G  VS R   E  G + LK  LA  G       +  D+F HADMHPG
Sbjct: 233 YCRESVLVMERIYGIPVSDRAALEANGTD-LK-LLAERGVEVFFTQVFRDSFFHADMHPG 290

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           N+ V                P  I +D G+   L++ D+  L E F A   RD R  AE 
Sbjct: 291 NVFVSYEHPHD---------PQWIGIDCGIVGTLNRQDKRYLAENFLAFFNRDYRKVAE- 340

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
              L  Q     P   +EE + A        +  P  ++    + +  L    RR  ++V
Sbjct: 341 ---LHVQSGWVPPDTKVEEFESALRTVLEPIFAKPLAEISF-GQVLLNLFNTARRFNMHV 396

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R L P  ++  T +  L
Sbjct: 397 QPQLVLLQKTLLYIEGLGRHLYPQLDLWQTAKPFL 431


>gi|331091552|ref|ZP_08340389.1| hypothetical protein HMPREF9477_01032 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330403717|gb|EGG83271.1| hypothetical protein HMPREF9477_01032 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 524

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 188/408 (46%), Gaps = 34/408 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK GQ  +   D+ P+  C +L  L S+ P   FA  ++ ++ A+G    EI
Sbjct: 35  LEDLGPTFIKLGQIMSMHSDILPKRYCDELMRLRSEVPPMLFAEVEEVLQGAYGCPWREI 94

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F+  +E P+ S SIAQVH+A L+    G++     V VKV+  G+ + + RD  +++ A 
Sbjct: 95  FEKIDEKPLGSASIAQVHKALLK---TGEE-----VVVKVQRKGIYDKMARDIGLLHRAV 146

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF---PKPV 400
           K+   +     + LD  +++       +++   EAA+L  F    RR KD++F   PK  
Sbjct: 147 KLLPPVSLKGMVDLDMVLEELWAVTREEMNFLTEAANLEEFA---RRNKDIAFVGVPKLY 203

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +   +  VLV  Y +G  V    + L     L+     +  H  +K ++ D F HAD HP
Sbjct: 204 HEYTNHYVLVMEYIEGYAVDDKENLLADGYDLEEVGVKLVDH-YIKQVMEDGFFHADPHP 262

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GN+ +R  +              +I++D+GM   L++ DR  + +  + +A  D     +
Sbjct: 263 GNVKIRGGK--------------IIWIDMGMMGRLTERDRELIGKAIEGIAMSDIGMIQD 308

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
             + L   +  P+     E +    + +G  E   +  A+    L+E ++ +++ +   +
Sbjct: 309 AVMALGDFKEAPDQSCLYEGIGNLLSQYGNAEMGNIDIAKVTMSLMEVMKENKIIMPHGL 368

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDTLQ-----TLLLKADWAKSLSYT 623
             +      +EG    + P  N+++         LL + DW + L  +
Sbjct: 369 TMLARGLTHMEGVIADIAPELNMVEIASRHMAGKLLKEKDWKQELKNS 416


>gi|257092604|ref|YP_003166245.1| putative ubiquinone biosynthesis protein UbiB [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257045128|gb|ACV34316.1| 2-polyprenylphenol 6-hydroxylase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 510

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 176/394 (44%), Gaps = 22/394 (5%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + LE+ GP F+K+GQ  +TR DL   D+  +L++L  + P  S       I +A+GR  +
Sbjct: 54  QALESLGPIFVKFGQVLSTRRDLLRTDIADELAKLQDRVPPFSSELALAQIAQAYGRPAN 113

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
           E+F  F+  PVAS SIAQVH A LR    G       VAVKV  P +   I  D  ++  
Sbjct: 114 EVFAEFDATPVASASIAQVHFARLRPEDGGH-----AVAVKVLRPEMHGVIANDLALLET 168

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           LA  +  V    K L+  E V +FA ++  ++DL REAA+ S+   NF   + +  P+  
Sbjct: 169 LAGVLEKVWSDGKRLKPREVVGEFAKYLYDELDLMREAANCSQLRRNFSGSRLLQVPEVY 228

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +      V+V     G  +S+    +     L  AL+  G       +  D F HADMHP
Sbjct: 229 WDQCTTTVMVMERMHGIPISQTGALIAAGIDL-PALSRAGVEIFFTQVFRDGFFHADMHP 287

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI + V                 I LD G+   L+  D+  L + F A  +RD +  A 
Sbjct: 288 GNIFIAVDPAHHGS---------YIALDFGIVGTLTDADKNYLAQNFLAFFQRDYKRVAT 338

Query: 521 CTLRLS---KQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             +              +A I  V E    +  P  ++      + +L +  RR  V + 
Sbjct: 339 AHIEAGWAPADTRADEFEAAIRAVCE--PIFDRPLHEISF-GRVLLRLFQTSRRFNVEIQ 395

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 396 PQLVMLQKTLLNIEGLGRQLDPNLDLWKTAKPFL 429


>gi|385302885|gb|EIF46993.1| abc1 family protein [Dekkera bruxellensis AWRI1499]
          Length = 300

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/221 (38%), Positives = 120/221 (54%), Gaps = 21/221 (9%)

Query: 178 LVECVILLMRALYLGVLFSPSIMMAPFADSFGPQFRE-------LWLHVVLRTLETAGPA 230
           ++E +I L R   L +LF P I+  P    FG + R+        W   V    ETAG +
Sbjct: 74  ILEPLITLSRLCELTILFFPVILSYPIV-FFGHRNRKGEHXGALRWYKFVRIAAETAGAS 132

Query: 231 FIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF-GRRLSEIFDGFEE 289
           FIK GQWAA+R D+F   LC +LS+LHS A  HSFA TKK I++ F G  + ++FD    
Sbjct: 133 FIKLGQWAASRTDIFSSGLCNELSKLHSNARSHSFAATKKLIKQEFNGMXVDDLFDEIYP 192

Query: 290 APVASGSIAQVHRASLRFRYPGQKVKPI------------VVAVKVRHPGVGESIRRDFV 337
            P+ +G+IAQV+ A +  R+    ++P+             VAVKV HPG   SI RD  
Sbjct: 193 IPIGTGAIAQVYLAKVSSRFVXDYIRPMHIGEQGEGAHDKFVAVKVEHPGARMSIERDLK 252

Query: 338 IINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREA 378
           I+   A     +P ++WL L + V QFA+ M  Q+D+  EA
Sbjct: 253 IMKFFANFIXCLPTMEWLSLPQEVDQFAMMMRLQLDMRIEA 293


>gi|58582566|ref|YP_201582.1| ubiquinone biosynthesis protein [Xanthomonas oryzae pv. oryzae KACC
           10331]
 gi|58427160|gb|AAW76197.1| ubiquinone biosynthesis protein [Xanthomonas oryzae pv. oryzae KACC
           10331]
          Length = 575

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 175/400 (43%), Gaps = 53/400 (13%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP F+K GQ  ATR DL P +  ++LSEL +  P   F   +  +  A G  
Sbjct: 80  VRRALEALGPTFVKLGQVLATRVDLLPSEWIEELSELQNAVPALPFEQIRPQLVAALGME 139

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VI 338
              +F   +E P+A+ S+AQ HRA L        V    V +K+R P +G++I  D  ++
Sbjct: 140 PESVFARLDEQPLAAASLAQTHRAWL--------VDGTPVVLKIRRPDIGDTIDADLRLL 191

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA  + +  P +K  R  E VQQF V +  ++D A E  +  R   NF        P+
Sbjct: 192 ARLAEIVETRAPDLKRYRPAEVVQQFTVSLRRELDFAAEGRNAERIAANF-----AHDPQ 246

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERL--------KSALAHIGTHALLKMLLV 450
            V P V+     E+      V  ++D + G   L        + ALA  G   +LKM+L 
Sbjct: 247 VVVPAVYWEWTCESLN----VQEFIDGIPGRNLLTVDAAGLDRKALARAGAGIVLKMVLQ 302

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV 510
           D   HAD HPGNI              +     +  +D GM   +S+  R  + +    +
Sbjct: 303 DGCFHADPHPGNI-------------FYLRDGRIAVIDFGMVGRVSEQRRFQVAQLLHGM 349

Query: 511 ARRDGRTA-------AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQ 563
              D           A  +L + + +   +  AF++E      + G P  +L      + 
Sbjct: 350 VSYDAEAVIDVLLEWAGTSLEIDEPRLQQDIGAFVDE------YRGVPLKEL-RIGAMLG 402

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
            +   +R H + +  ++  ++   L LEG  R+LDP +++
Sbjct: 403 DVTSILRDHGLTLPSDLALMIKAFLTLEGMGRQLDPDFDM 442


>gi|397661273|ref|YP_006501973.1| putative ubiquinone biosynthesis protein [Taylorella equigenitalis
           ATCC 35865]
 gi|394349452|gb|AFN35366.1| putative ubiquinone biosynthesis protein [Taylorella equigenitalis
           ATCC 35865]
 gi|399115720|emb|CCG18523.1| probable ubiquinone biosynthesis protein [Taylorella equigenitalis
           14/56]
          Length = 512

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 188/399 (47%), Gaps = 30/399 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP FIK+GQ  +TR D+ P D+  +L  L  + P          +E +FG+ +SE
Sbjct: 55  ALEELGPIFIKFGQVLSTRRDIVPADIADELQLLQDRVPPFPSREAVSIVETSFGKPVSE 114

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +F  F E P AS S+AQVH ASL   + G++     VAVK+  P + + I +D +++ + 
Sbjct: 115 LFASFNEEPCASASVAQVHEASL---HNGRR-----VAVKILRPEMQKIIEKDLLLLHSF 166

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFR---RWKDVSFPK 398
           A+ I   +P  K L+  E + +F  ++  ++DL  EAA+ S+   NF+   R   +  P+
Sbjct: 167 ASLIQRFVPDGKRLKPKEVIAEFDQYLHDELDLQIEAANCSQLRRNFKKSDRENLLLVPE 226

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +   +  V    + +G  +++ +D +         LA +G       +  D F HADM
Sbjct: 227 VHWDYSNSKVFTMDWMEGIPIAQ-IDAVAEAGVDIKKLARMGVEIFFIQVFEDGFFHADM 285

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI + V  +   Q          + LD G+   LS  D+  L + F A   RD R  
Sbjct: 286 HPGNIFISVNPQTFGQ---------YVALDFGIVGSLSDFDKNYLAQNFLAFFNRDYRRV 336

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRV 574
           A+  L +  Q      +   E+++ A      P  D     +     +++L    +R +V
Sbjct: 337 AQ--LHIESQWVPAGTRE--EQLEAAIRAVCEPYFDRPISEISLGNVLKRLFLISKRFQV 392

Query: 575 NVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           ++   +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 393 SIQPQLVLLQKTLLNVEGMGRELDPDLDLWSTAKPFLEK 431


>gi|319779031|ref|YP_004129944.1| ubiquinone biosynthesis monooxygenase UbiB [Taylorella
           equigenitalis MCE9]
 gi|317109055|gb|ADU91801.1| Ubiquinone biosynthesis monooxygenase UbiB [Taylorella
           equigenitalis MCE9]
          Length = 487

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 188/398 (47%), Gaps = 30/398 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK+GQ  +TR D+ P D+  +L  L  + P          +E +FG+ +SE+
Sbjct: 31  LEELGPIFIKFGQVLSTRRDIVPADIADELQLLQDRVPPFPSREAVSIVETSFGKPVSEL 90

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F  F E P AS S+AQVH ASL   + G++     VAVK+  P + + I +D +++ + A
Sbjct: 91  FASFNEEPCASASVAQVHEASL---HNGRR-----VAVKILRPEMQKIIEKDLLLLHSFA 142

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFR---RWKDVSFPKP 399
           + I   +P  K L+  E + +F  ++  ++DL  EAA+ S+   NF+   R   +  P+ 
Sbjct: 143 SLIQRFVPDGKRLKPKEVIAEFDQYLHDELDLQIEAANCSQLRRNFKKSDRENLLLVPEV 202

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
            +   +  V    + +G  +++ +D +         LA +G       +  D F HADMH
Sbjct: 203 HWDYSNSKVFTMDWMEGIPIAQ-IDAVAEAGVDIKKLARMGVEIFFIQVFEDGFFHADMH 261

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGNI + V  +   Q          + LD G+   LS  D+  L + F A   RD R  A
Sbjct: 262 PGNIFISVNPQTFGQ---------YVALDFGIVGSLSDFDKNYLAQNFLAFFNRDYRRVA 312

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVN 575
           +  L +  Q      +   E+++ A      P  D     +     +++L    +R +V+
Sbjct: 313 Q--LHIESQWVPAGTRE--EQLEAAIRAVCEPYFDRPISEISLGNVLKRLFLISKRFQVS 368

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +   +  +  T L +EG  R+LDP  ++  T +  L K
Sbjct: 369 IQPQLVLLQKTLLNVEGMGRELDPDLDLWSTAKPFLEK 406


>gi|37523747|ref|NP_927124.1| hypothetical protein glr4178 [Gloeobacter violaceus PCC 7421]
 gi|35214752|dbj|BAC92119.1| glr4178 [Gloeobacter violaceus PCC 7421]
          Length = 595

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 173/405 (42%), Gaps = 35/405 (8%)

Query: 211 QFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKK 270
           + R +W      T+   GP FIK GQ  +TR DLFP++  ++LS L  + P   +    +
Sbjct: 90  RMRAIWTR---ETMLELGPTFIKVGQLFSTRADLFPKEYIEELSRLQDEVPAFPYEQVVE 146

Query: 271 TIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGE 330
            +E  FG+ + ++F  F+  P+A+ S+ QVHRA L   + G+      V VKV+ PG+ +
Sbjct: 147 IVEDQFGKPIPQVFQFFDPTPIAAASLGQVHRAQL---HSGED-----VVVKVQRPGLEK 198

Query: 331 SIRRDFVIINLAAKISSVIP-----AVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFI 385
               D  I+   A+     P       +W+ +     + A  +M ++D   E  +   F 
Sbjct: 199 LFNVDLGILRGIAQYLQNHPRYGRGGREWVPI---YDECARILMQEIDYLNEGRNADTFR 255

Query: 386 YNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALL 445
            NF+   ++  P+  +    P VL   Y  G  +S Y + L+     + +LA IG  + L
Sbjct: 256 RNFKDSPEICVPRVYWRYSSPRVLTLEYLPGIKISNY-EALEAAGLDRRSLARIGARSYL 314

Query: 446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE 505
           + LL D F HAD HPGNI V             R    +IF D GM   +    +  L++
Sbjct: 315 QQLLNDGFFHADPHPGNIAV-------------RHDGALIFYDFGMMGHIQPGTKEKLMD 361

Query: 506 FFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL--VHPAECMQ 563
            F  VA+ D     +  + L   +   +       ++     +     +L   + AE   
Sbjct: 362 TFLGVAQSDADKVIDSLIELGAIKKSADRVPIRRSIEFLLTNFVNQPYNLQSFNFAELTD 421

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
            + E               V+     LEG  + LDP +N MD  Q
Sbjct: 422 DIYEMAYEQPFRFPATFTFVLRAVSTLEGLGKGLDPDFNFMDVAQ 466


>gi|394988496|ref|ZP_10381331.1| hypothetical protein SCD_00896 [Sulfuricella denitrificans skB26]
 gi|393791875|dbj|GAB70970.1| hypothetical protein SCD_00896 [Sulfuricella denitrificans skB26]
          Length = 559

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 171/387 (44%), Gaps = 26/387 (6%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP F+K GQ  ATR D+FP +   +  +L S  P   F      +E A G  
Sbjct: 64  VRRVLEDLGPTFVKLGQVMATRVDVFPPNWIAEFEKLQSGVPPVPFESLMPQLEAALGCS 123

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VI 338
             EIF   +   VA+ SIAQVH A L+   P        V +K+R PG+   I  D  ++
Sbjct: 124 PHEIFQELQTESVAAASIAQVHHAKLQDGTP--------VVLKIRRPGIRTKIEADLRIL 175

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
           ++LA  I   +P ++  +  + V QFA  +  ++D   EA ++ RF  NF     V  P+
Sbjct: 176 MHLARLIEFEMPEMRRYQPIQIVMQFARSLRRELDFVAEARNIDRFAENFAGSDTVVIPR 235

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVD-ELQGHERLKSALAHIGTHALLKMLLVDNFIHAD 457
             +      + V+ +  G   +     E  G +R    LA  G  A+LKM++VD F HAD
Sbjct: 236 VYWEWTSDVMNVQQWVDGIPGNNLAAVEAAGLDR--KVLAAHGADAVLKMIMVDGFYHAD 293

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGN+              +     +  +D GM   L    R  +V+   A+A +D   
Sbjct: 294 PHPGNV-------------FYLPGNRIAMIDFGMVGRLMDGRRNQIVDLLAALAGKDDEG 340

Query: 518 AAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             +  L  +        K   +  +  F +   P  DL    + +  L   +R H + + 
Sbjct: 341 MLDVLLEWTGDAAVDESKLAADVNEFVFNYANVPLKDL-RLGKLLGDLTVIMRDHFLVMP 399

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVM 604
            ++  +    + LEG  R+LDP ++++
Sbjct: 400 ADLAMLFKALITLEGLGRQLDPDFDMV 426


>gi|194324302|ref|ZP_03058076.1| 2-polyprenylphenol 6-hydroxylase [Francisella novicida FTE]
 gi|194321749|gb|EDX19233.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           novicida FTE]
          Length = 515

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 190/426 (44%), Gaps = 33/426 (7%)

Query: 200 MMAPFADSFGPQFRELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHS 258
           M+ PF   +  + R L   V +R  LE  GP FIK+GQ  + R DL P D+ K++S+L  
Sbjct: 1   MLNPFY--YSRRVRRLEHGVRIREALEKLGPIFIKFGQALSVRADLLPPDVIKEVSKLQD 58

Query: 259 KAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIV 318
             P        + IE+A  + ++EIF  FE +P+AS S+AQVH A L+            
Sbjct: 59  NVPPFDNKIAAEQIEKAAKKPINEIFKSFESSPLASASVAQVHAAVLQ--------NDDK 110

Query: 319 VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREA 378
           V VKV  PG+ + ++ D  ++   A + S +  ++  +  E V++       ++DL REA
Sbjct: 111 VVVKVLRPGIEKILKLDTSLMLFFATLLSKLKEIRRFKPVEIVKEINQSFFDELDLVREA 170

Query: 379 AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS--RYVDELQGHERLKSAL 436
           ++ S+   NF        PK  +      V+V     G  VS    +D L    RL   L
Sbjct: 171 SNASQIRRNFENSAIHYVPKIYWEYTSSTVMVMERVGGVRVSDIETLDALGVDRRL---L 227

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS 496
           A  G       +  D F HADMHPGN+ + V+           + P  I +D G+   L+
Sbjct: 228 AQRGVEIFYSQVFDDCFFHADMHPGNMFIDVSNP---------ADPKYISIDFGIVGTLN 278

Query: 497 KTDRVNLVEFFKAVARRDGRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEG 553
           + D+  L   F A  +RD R  AE  +    +         ++ I  V E        E 
Sbjct: 279 RDDQRYLAGNFLAFFKRDYRKVAELHIESGWVPSDTRVDVLESAIRTVCEPIFEKPMKEI 338

Query: 554 DLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            L +    + QL    RR  +N+   +  +  T   +EG  +KL P  N+ +T + +L K
Sbjct: 339 SLGY---TLMQLFAVARRFNMNIQPQLTLLQKTLFHVEGLGQKLCPELNIWETSRPILEK 395

Query: 614 ADWAKS 619
             W K 
Sbjct: 396 --WMKE 399


>gi|254442968|ref|ZP_05056444.1| ABC1 family protein [Verrucomicrobiae bacterium DG1235]
 gi|198257276|gb|EDY81584.1| ABC1 family protein [Verrucomicrobiae bacterium DG1235]
          Length = 552

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 199/442 (45%), Gaps = 38/442 (8%)

Query: 180 ECVILLMRALYLGVL----FSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWG 235
           E V +L R  +  +L      P +M A       P+ R  W  + +  +E  GP FIK+G
Sbjct: 17  EIVTVLARYGFADLLQKMDLPPRLMSA--LGKMAPERRSQWERLRI-VMEELGPTFIKFG 73

Query: 236 QWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASG 295
           Q  + RPD+ P  L K+L +L  + P  SF   +  +E   G+ L  +F  F+E  VA  
Sbjct: 74  QLLSMRPDVVPEALIKELRKLQERVPPVSFDQIRPILEEGIGQDLRAVFSEFDEKAVAGA 133

Query: 296 SIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLAAKISSVIPAVKW 354
           S+AQVHRA  R    G+      VAVKV+ PG+ + I  DF ++I  A +    I  ++ 
Sbjct: 134 SMAQVHRA--RLASTGE-----AVAVKVQRPGLQKVIDADFDILIWFARQAHERIDDLRP 186

Query: 355 LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYE 414
           L L E ++     +  ++D  REA  LS F       ++V  PK         V+V  + 
Sbjct: 187 LNLPEVIEAMRESLERELDFRREARSLSYFSQRNAYPEEVCSPKIFEDYCGRRVVVMEWI 246

Query: 415 QGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQ 474
           +G    R ++  +        L+ +G+ ++   +++D + HAD H GNI V         
Sbjct: 247 EG----RRLESFEPGTPEARKLSKVGSRSMFHQIMIDGYFHADPHAGNIRV--------- 293

Query: 475 KRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNP 534
                +   + FLD GMT +L++  R  LV+ F+A  + D    +   + L+      + 
Sbjct: 294 ----LADGRLCFLDWGMTGQLTQRMRYGLVDLFQAFVKADAEQVSRIAMHLADTGKSIDR 349

Query: 535 KAFIEEVDEAFAFWGTP---EGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLE 591
           +    +V+ A      P   EGD+      + +LL    R+ +++  +   +    L +E
Sbjct: 350 RRMERDVNVAIREHYNPDTGEGDV---GRAILRLLYVFGRNGIDLARDYSLMAKAILCVE 406

Query: 592 GWQRKLDPGYNVMDTLQTLLLK 613
                LD G+N+ D    +L K
Sbjct: 407 ETGTTLDEGFNLKDEFGPVLKK 428


>gi|302527032|ref|ZP_07279374.1| 2-polyprenylphenol 6-hydroxylase [Streptomyces sp. AA4]
 gi|302435927|gb|EFL07743.1| 2-polyprenylphenol 6-hydroxylase [Streptomyces sp. AA4]
          Length = 430

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 175/403 (43%), Gaps = 32/403 (7%)

Query: 216 WLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERA 275
           W  V +  L   GP F+K GQ   TR D+ P  LC  LS L       + A T + ++ A
Sbjct: 46  WARVTV-LLTRLGPTFVKAGQVLGTRRDVVPAALCDALSVLQDSVAPLNEAETARAVKEA 104

Query: 276 FGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD 335
           +G    E+F   +  PVASGS+A V+RA LR    GQ      VAVK+R PG+   +  D
Sbjct: 105 YGSEADEVFAELDPRPVASGSVASVYRARLR---TGQD-----VAVKLRRPGIERVMTDD 156

Query: 336 FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS 395
             +I   A I++ +P  + + + E V   A  ++ Q+D  REA  L R   N      V 
Sbjct: 157 LALIRRGAAIAARLPVFRDVPVREVVGSLADAVLGQLDFEREARSLRRLRENLSEVPRVW 216

Query: 396 FPKPVYP-LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFI 454
            PK VYP    P  +V  +  G  +             +   A  G  A+ +ML VD F+
Sbjct: 217 VPK-VYPEACRPRCIVMEFVPGLVLDAADGCGAAA---RRRFAASGMAAMYQMLFVDGFV 272

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           H D+HPGN+              F     V+ LD G + +LS   R    EFF  +A   
Sbjct: 273 HCDLHPGNL-------------YFTRGSQVVVLDAGFSVQLSDRLRRQFAEFFLNMAIGR 319

Query: 515 GRTAAECTLR--LSKQQNCPNPKAFIEEV-DEAFAFWGTPEGDLVHPAECMQQLLEKVRR 571
           G  AA   L       +N   P  F E + D      G P  +    A    ++ +  RR
Sbjct: 320 GEQAARIVLESAAGTTENADVP-GFTERMADLVERSHGLPAKEFSLIA-FAAEMFDLQRR 377

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
             ++    +   +++ LV+EG  R LDP  +  +  +  L++ 
Sbjct: 378 FGIHAATELIFPLLSLLVIEGTVRALDPDLDFQEAARPQLMRG 420


>gi|220932060|ref|YP_002508968.1| 2-octaprenylphenol hydroxylase [Halothermothrix orenii H 168]
 gi|219993370|gb|ACL69973.1| 2-octaprenylphenol hydroxylase [Halothermothrix orenii H 168]
          Length = 559

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 188/391 (48%), Gaps = 24/391 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TRPD+ P    ++L +L  K     F   +K + +  G    E
Sbjct: 65  VLQELGPTFIKFGQLMSTRPDILPPVYIQELRKLQDKVTPLPFEDIEKVLIQELGESYRE 124

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +F   EE P A+ SIAQ HRA+L   + G       V +K+R PG+ ++I+ D  I+ NL
Sbjct: 125 LFKDLEETPEAAASIAQTHRATL---HDGSD-----VILKIRRPGIEKTIKVDLEILHNL 176

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ I      +++++    V++F+  +  +++   E A+++RF  NF+  K +  P    
Sbjct: 177 ASIIDERGLILQFIKATSLVEEFSNTLKKELNFQIEVANVTRFKNNFKDHKYILAPDVYE 236

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
            L    ++     +G+ +S+ V      +  +  LA +G  +L+K +L+D F HAD HPG
Sbjct: 237 RLSTKRLITMERIKGKKLSQVVKGEGLGQVNRGFLARLGAKSLMKQVLLDGFFHADPHPG 296

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI+V  + K             + ++D GM  +L+++DR  L   F AV +++     + 
Sbjct: 297 NIIVVGSDK-------------LAYIDFGMMGQLTQSDRDKLSLLFVAVLKKNIDMIVDI 343

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
            + L       N +    ++ +    ++G    D +  +  ++ L + +  + +++    
Sbjct: 344 LIELGITTKSVNIRKLKLDIQDLINRYYGIDLKD-IEFSVVIEDLQKILYNYSISLPQEF 402

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             ++    V EG    LDP  N+ +   + L
Sbjct: 403 FLLIRAISVSEGVGFMLDPSLNLAEVGNSFL 433


>gi|84624452|ref|YP_451824.1| ubiquinone biosynthesis protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188575919|ref|YP_001912848.1| 2-polyprenylphenol 6-hydroxylase [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|84368392|dbj|BAE69550.1| ubiquinone biosynthesis protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188520371|gb|ACD58316.1| 2-polyprenylphenol 6-hydroxylase [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 558

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 175/400 (43%), Gaps = 53/400 (13%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP F+K GQ  ATR DL P +  ++LSEL +  P   F   +  +  A G  
Sbjct: 63  VRRALEALGPTFVKLGQVLATRVDLLPSEWIEELSELQNAVPALPFEQIRPQLVAALGME 122

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VI 338
              +F   +E P+A+ S+AQ HRA L        V    V +K+R P +G++I  D  ++
Sbjct: 123 PESVFARLDEQPLAAASLAQTHRAWL--------VDGTPVVLKIRRPDIGDTIDADLRLL 174

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA  + +  P +K  R  E VQQF V +  ++D A E  +  R   NF        P+
Sbjct: 175 ARLAEIVETRAPDLKRYRPAEVVQQFTVSLRRELDFAAEGRNAERIAANF-----AHDPQ 229

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERL--------KSALAHIGTHALLKMLLV 450
            V P V+     E+      V  ++D + G   L        + ALA  G   +LKM+L 
Sbjct: 230 VVVPAVYWEWTCESLN----VQEFIDGIPGRNLLTVDAAGLDRKALARAGAGIVLKMVLQ 285

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV 510
           D   HAD HPGNI              +     +  +D GM   +S+  R  + +    +
Sbjct: 286 DGCFHADPHPGNI-------------FYLRDGRIAVIDFGMVGRVSEQRRFQVAQLLHGM 332

Query: 511 ARRDGRTA-------AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQ 563
              D           A  +L + + +   +  AF++E      + G P  +L      + 
Sbjct: 333 VSYDAEAVIDVLLEWAGTSLEIDEPRLQQDIGAFVDE------YRGVPLKEL-RIGAMLG 385

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
            +   +R H + +  ++  ++   L LEG  R+LDP +++
Sbjct: 386 DVTSILRDHGLTLPSDLALMIKAFLTLEGMGRQLDPDFDM 425


>gi|294790351|ref|ZP_06755509.1| putative ubiquinone biosynthesis protein AarF [Scardovia inopinata
           F0304]
 gi|294458248|gb|EFG26601.1| putative ubiquinone biosynthesis protein AarF [Scardovia inopinata
           F0304]
          Length = 582

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 191/415 (46%), Gaps = 54/415 (13%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  + R ++   + C +L++L S A    F   K T+E  +   + ++
Sbjct: 79  LEELGPTFVKVGQILSMRSEILSEEYCNELAKLKSDADPMPFNLVKATVEHEYHCPIDKV 138

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F   +  P+ S S+AQVHRA+L     G+      VA+KV+ PGV E++ +D  II   A
Sbjct: 139 FSFIDPQPLGSASLAQVHRATL---ITGED-----VAIKVQRPGVKETMAQDIEIIRFVA 190

Query: 344 KISSVIPAVKWLRLD--ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
             ++ I +     +D    V +      S+ D   EA +L  F      +  +  P+P  
Sbjct: 191 NAATKIASQNSQIIDFMGVVDELWETFQSETDFTVEAKNLQEFKAFANDYAYMDCPRPYM 250

Query: 402 PLVHPAVLVETYEQGECVSRYVD-ELQGHERLKSALAHIGTHALLKMLLVDN-------- 452
            L    ++V  Y  G  +S +     +G++     L  IGT       LVDN        
Sbjct: 251 HLCTQHIVVMDYIDGIPISDFAALRKEGYD-----LEEIGTK------LVDNYATQVLDK 299

Query: 453 -FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVA 511
            F HAD H GNI++R  Q              ++ +D+GM   +S   R  L +   AV 
Sbjct: 300 GFFHADPHSGNIIIRGGQ--------------IVLIDLGMVGRISSEMRSILRQMIFAVP 345

Query: 512 RRDGRTAAECTLRL----SKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLE 567
           R+D  T  E  LRL    S  Q   N  A + ++D   + +GT + + +   + +  +++
Sbjct: 346 RKDSVTLEEGLLRLADISSSGQQVDNA-ALLADIDLIISDFGTVDLNDLDIGKFIMSMMQ 404

Query: 568 KVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK----ADWAK 618
              R+++ + G++ TV  + + LEG   +L P  N++D + + ++     AD+ K
Sbjct: 405 LASRNKLKLPGSITTVARSLVTLEGLVNQLMPQANIIDIITSHVISSVKPADYVK 459


>gi|424920981|ref|ZP_18344342.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas fluorescens R124]
 gi|404302141|gb|EJZ56103.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas fluorescens R124]
          Length = 534

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 177/393 (45%), Gaps = 25/393 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L  L  + P      + K IE   G+++SE
Sbjct: 62  ALQDLGPIFIKFGQILSTRRDLLPEDIADELMLLQDRVPPFDSQLSIKLIEEQLGKKISE 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + 
Sbjct: 122 VFSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPVIAQDLAWLFIL 173

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ +  + A  + L   + VQ +   +  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 174 ARAAEKVSADARLLHPVDVVQDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  V+           +K  LA  G       +  D+F HADMHPG
Sbjct: 234 DWCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V      S         P  I +D G+   L+  D+  L     A  +RD R  A+ 
Sbjct: 293 NIFVSTVNPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQL 343

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V  
Sbjct: 344 HIDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQP 400

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 401 QLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|402565510|ref|YP_006614855.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia cepacia GG4]
 gi|402246707|gb|AFQ47161.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia cepacia GG4]
          Length = 525

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 176/393 (44%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL   D   +L++L  + P    A     IE++ G  + E+
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLSVDFANELAKLQDQVPPFDSAVAIAIIEKSLGAPVDEL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           FD FE  P+AS SIAQVH A L+      K     VAVKV  P +   I  D  ++ ++A
Sbjct: 116 FDEFEREPIASASIAQVHFAKLKQGVHAGK----AVAVKVLRPNMLPVIDSDLALMRDIA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 172 TWTERMWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWD 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VLV     G  +S+ V+ L+        LA  G       +  D F HADMHPGN
Sbjct: 232 FSTSQVLVMERMTGVPISQ-VETLRTAGVDIKKLAREGVEIFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +  K   +          I LD G+   LS  D+  L + F A  +RD    A   
Sbjct: 291 IQVSLDPKTFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLH 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
           L    +     P+  +EE++ A      P  D     +   + + +L    RR  V +  
Sbjct: 342 L----ESGWVPPETRVEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 398 QLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|429211481|ref|ZP_19202646.1| ubiquinone biosynthetic protein UbiB [Pseudomonas sp. M1]
 gi|428155963|gb|EKX02511.1| ubiquinone biosynthetic protein UbiB [Pseudomonas sp. M1]
          Length = 532

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 182/399 (45%), Gaps = 39/399 (9%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK+GQ  +TR DL P D+  +L+ L  K P      +   IE   G ++ ++
Sbjct: 64  LEGLGPIFIKFGQILSTRRDLLPDDIANELARLQDKVPPFPPDASVALIEEQLGAKVEQV 123

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD----FVII 339
           F  FE  P+AS S+AQVH A L+    G++     V VKV  PG+   IR D    F++ 
Sbjct: 124 FARFEREPLASASVAQVHAAQLK---SGEE-----VVVKVIRPGLKPVIRADMSWLFILA 175

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
            LA ++S+     + L   E V  +   +  ++DL REAA+ S+   NF     +  P+ 
Sbjct: 176 RLAERVSA---DARRLHPVEVVSDYEKTIYDELDLLREAANSSQLRRNFDGSPLLYVPQV 232

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
            +    P VLV     G  V+  +D L+       ALA  G       +  D+F HADMH
Sbjct: 233 YWDWCRPKVLVMERIYGIPVTD-LDTLRDQRTDFKALAERGVEIFFTQVFRDSFFHADMH 291

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDR----VNLVEFFKAVARRDG 515
           PGNI V      S         P  I +D G+   L+  D+     NL+ FFK    RD 
Sbjct: 292 PGNIFVSTRTPWS---------PQYIAVDCGIVGSLTDEDQDYLARNLIAFFK----RDY 338

Query: 516 RTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRH 572
           R  A+  +    +  +    + +A I  V E    +  P  D+    + + +L +  RR 
Sbjct: 339 RKVAQLHIDSGWVPAETRVNDFEAAIRTVCE--PIFEKPLKDISF-GQVLLRLFQTARRF 395

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            + V   +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 396 NMEVQPQLVLLQKTLLNIEGLGRQLYPELDLWSTAQPYL 434


>gi|332982432|ref|YP_004463873.1| ABC transporter [Mahella australiensis 50-1 BON]
 gi|332700110|gb|AEE97051.1| ABC-1 domain-containing protein [Mahella australiensis 50-1 BON]
          Length = 557

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 170/383 (44%), Gaps = 23/383 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  + RPDL P +  ++LS+L    PE  F   K  IE+  G  +  I
Sbjct: 65  LEEMGPLFMKLGQILSVRPDLIPEEYIRELSKLQDAGPELLFDVIKTAIEKEIGSSIENI 124

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F   +  P+A+ SIAQVH+  L+            V +K++ P + + +  D  I+  +A
Sbjct: 125 FAYIDPQPIAAASIAQVHKGILK--------DDSEVIIKIQRPDIDDIVEADLAILKEIA 176

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             + + +P  +  +    V + +  +  ++D  RE  ++  F  NF  + ++  PK  + 
Sbjct: 177 GLMEARMPESRRYQPMGIVNELSRSIRRELDFVREGMNIDHFRRNFEGYTEIYVPKVYWE 236

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                +LV  Y  G  V+  ++++      +  +A  G  A++K +  D F HAD HPGN
Sbjct: 237 YTTKHMLVMEYIDGVKVNE-IEKIDAMGLDRKTIAENGARAIMKQIFEDGFFHADPHPGN 295

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I +                  + F+D GM   L+K D+ ++V+   AV  RD     E  
Sbjct: 296 IFI-------------IRDGRIAFIDFGMMGRLTKEDQEHVVDLISAVINRDVNGIIEAF 342

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCT 582
             +       + + F  +V E    +       ++  E + + +    R+ +++      
Sbjct: 343 FNIGVLSKDVDLRGFYIDVTELLEKYYEKTLAEINMGELINETVSMAFRYGISLPSQFTL 402

Query: 583 VMVTTLVLEGWQRKLDPGYNVMD 605
           +  + + +EG  ++L P  NV +
Sbjct: 403 LDKSLMTIEGVAKQLYPEVNVFE 425


>gi|398962094|ref|ZP_10679114.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM30]
 gi|398151617|gb|EJM40161.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM30]
          Length = 534

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 177/393 (45%), Gaps = 25/393 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L  L  + P      + K IE   G+++SE
Sbjct: 62  ALQDLGPIFIKFGQILSTRRDLLPEDIADELMLLQDRVPPFDSQLSIKLIEEQLGKKISE 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + 
Sbjct: 122 VFSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPVIAQDLAWLFIL 173

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ +  + A  + L   + VQ +   +  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 174 ARAAEKVSADARLLHPVDVVQDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  V+           +K  LA  G       +  D+F HADMHPG
Sbjct: 234 DWCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V      S         P  I +D G+   L+  D+  L     A  +RD R  A+ 
Sbjct: 293 NIFVSTVNPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQL 343

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V  
Sbjct: 344 HIDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQP 400

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 401 QLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|386827028|ref|ZP_10114135.1| 2-polyprenylphenol 6-hydroxylase [Beggiatoa alba B18LD]
 gi|386427912|gb|EIJ41740.1| 2-polyprenylphenol 6-hydroxylase [Beggiatoa alba B18LD]
          Length = 553

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 179/389 (46%), Gaps = 29/389 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           +E  GP F+K+GQ  +TR DL P D+  +L++L  K    + A  +  +ERA+   ++E+
Sbjct: 62  MEELGPIFVKFGQILSTRRDLLPNDIALELAQLQDKVKPFNGAQARAIVERAYNSPIAEV 121

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F   P+A+ SIAQVH A L   + G++     V VKV  P + + IRRD  ++ L A
Sbjct: 122 FAEFNTEPIAAASIAQVHAARL---HNGRE-----VVVKVVRPNLEKGIRRDVDLLYLIA 173

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             I+      + LR  E V +F   + +++DL +EAA+ ++   NF++   +  P+  + 
Sbjct: 174 HLINRYWLDGRRLRPHEVVVEFEKNLYAELDLMQEAANCAQLRRNFQQSNLLYIPEIEWA 233

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                V+V    +G  +S      Q     K  LA  G       +  DNF HADMHPGN
Sbjct: 234 YTQTNVMVMERIRGLPISDIETMRQLGVNFK-FLAETGVEIFFTQVFRDNFFHADMHPGN 292

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           + V              ++PH I +D G+   LS  D+  L   F A   RD R  AE  
Sbjct: 293 VFVDATNP---------NRPHYIAIDFGIMGTLSDQDQHYLAANFLAFFNRDYRRVAE-- 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             L            +EE + A        +  P  D+      + +L +  RR ++ V 
Sbjct: 342 --LHVHSGWVPAGTRVEEFEGAIRSVCEPIFDRPLKDISF-GLLLLRLFQTARRFQMEVQ 398

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
             +  +  T L +EG  R+L P  ++  T
Sbjct: 399 PQLVLLQKTLLNIEGLGRELYPELDLWKT 427


>gi|421074090|ref|ZP_15535132.1| ABC-1 domain-containing protein [Pelosinus fermentans JBW45]
 gi|392527887|gb|EIW50971.1| ABC-1 domain-containing protein [Pelosinus fermentans JBW45]
          Length = 558

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 179/408 (43%), Gaps = 29/408 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP ++K GQ A+TRPDL P ++  +L +L    P  SF   +  ++   G  L  
Sbjct: 62  VLEQLGPTYVKLGQIASTRPDLLPPEIIDELEKLQDAVPAFSFTEVRSVLQEELGGTLEI 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
            F  FE  P+A+ SI QVH+A L+            VAVK++ P +   I+ D  I+  L
Sbjct: 122 FFQHFEPEPIAAASIGQVHQAVLK--------TGTTVAVKIQRPSIAIDIQTDLEILYEL 173

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           +  +       K  +L + + +F+  + S++D   EA +  +    F +   +  PK  +
Sbjct: 174 SNLVERRFHWAKSYQLMDMIDEFSKSLRSELDYTSEARNAEKISKQFTKNPMIYVPKIYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   Y +G  +S+  D  +    L S LA      +   + ++ F H D HPG
Sbjct: 234 DYSTQKVLTAEYIEGIKISKKEDLKEKGYNL-SLLAERFAKGIFHQIFMEGFFHGDPHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           N++V   +              ++FLD GM   LS   + NL      + R+D     + 
Sbjct: 293 NVVVLPGEI-------------IVFLDFGMVGRLSSEMKYNLSSLVIGLMRQDSDELTKA 339

Query: 522 TLRLSKQQNCPNPKAFIEEVDE-AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
             R+    +  N     E+++     ++G P    V   E +  +     +H++ +  ++
Sbjct: 340 IFRMGIVPDHVNRIQLREDIEVLKEKYYGIPLSK-VSLGEAVSSIFAVALKHKIKIPADL 398

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDTL----QTLLLKADWAKSLSYTI 624
             V    L +EG   +LDP  +++D      Q LL++    K+L+ T+
Sbjct: 399 VLVGKALLTMEGIVERLDPRLSILDVAEPFGQKLLMERLHPKNLTKTL 446


>gi|294626631|ref|ZP_06705228.1| ubiquinone biosynthesis protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294665634|ref|ZP_06730911.1| ubiquinone biosynthesis protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292599051|gb|EFF43191.1| ubiquinone biosynthesis protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292604580|gb|EFF47954.1| ubiquinone biosynthesis protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 558

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 175/400 (43%), Gaps = 53/400 (13%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP F+K GQ  ATR DL P +  ++LSEL +  P   F   +  +  A G  
Sbjct: 63  VRRALEELGPTFVKLGQVLATRVDLLPPEWIEELSELQNAVPALPFDQIRPQLVAALGME 122

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VI 338
              +F   +E P+A+ S+AQ HRA L        V    V +K+R P +G++I  D  ++
Sbjct: 123 PESVFARLDEQPLAAASLAQTHRAWL--------VDGTPVVLKIRRPDIGDTIDADLRLL 174

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA  + +  P +K  R  E VQQF V +  ++D A E  +  R   NF     V    
Sbjct: 175 ARLAEIVETRAPDLKRYRPSEVVQQFTVSLRRELDFAAEGRNAERIAANFAHDAQV---- 230

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERL--------KSALAHIGTHALLKMLLV 450
                V PAV  E   +   V  ++D + G + L        + ALA  G   +LKM+L 
Sbjct: 231 -----VVPAVYWEWTCESLNVQEFIDGIPGRDLLAVDAAGLDRRALARAGAGIVLKMVLQ 285

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV 510
           D   HAD HPGNI              +     +  +D GM   +S+  R  + +    +
Sbjct: 286 DGCFHADPHPGNI-------------FYLRDGRIAVIDFGMVGRVSEQRRFQVAQLLHGM 332

Query: 511 ARRDGRTA-------AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQ 563
              D           A  +L + + +   +  AF++E      + G P  +L      + 
Sbjct: 333 VSYDAEAVIDVLLEWAGTSLEIDEARLQQDIGAFVDE------YRGVPLKEL-RIGAMLG 385

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
            +   +R H + +  ++  ++   L LEG  R+LDP +++
Sbjct: 386 DVTSILRDHGLTLPSDLALMIKAFLTLEGMGRQLDPDFDM 425


>gi|392535518|ref|ZP_10282655.1| 2-octaprenylphenol hydroxylase [Pseudoalteromonas arctica A 37-1-2]
          Length = 534

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 174/402 (43%), Gaps = 28/402 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSE 282
           L+  GP +IK+GQ  +TR DL P D+  +L+ L  +      A  +K IE+A     +SE
Sbjct: 58  LQELGPVWIKFGQMLSTRRDLLPHDIALELAFLQDQVQPFEGALAQKIIEKALEINDISE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F + P+AS SIAQVH A L      Q ++  VV +KV  P + E I  D  ++   
Sbjct: 118 LFSEFSQTPLASASIAQVHTAKL---IDEQSIEQDVV-IKVIRPNIYEQINADLALMEKL 173

Query: 343 AKI-SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AK+ + V    K LR  E V+++   ++ ++DL RE A+  +   NF     +  P    
Sbjct: 174 AKVLAKVHNESKRLRPVEVVKEYKKTLLDELDLMREGANGIQLKRNFEGSDSLYIPAVYS 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VLV     G  VS   D L         LA  G       +  D+F HADMHPG
Sbjct: 234 DYSRSNVLVMERIYGIPVSD-TDALLAQNTNMKLLAERGVEVFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V          R     P  I +D G+   LSK D+  L E F A   RD R  A+ 
Sbjct: 293 NIFV---------SREHPENPMYIGIDCGIVGTLSKEDKRYLAENFIAFFNRDYRQVAQ- 342

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
              L        P   IEE + A        +  P  ++      +  L    RR  + V
Sbjct: 343 ---LHVDSGWVPPDTSIEEFEFAIRTVCEPIFNKPLAEISF-GHVLVNLFNTARRFNMQV 398

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAK 618
              +  +  T L +EG  R+L P  ++  T +  L   DW K
Sbjct: 399 QPQLVLLQKTLLYVEGLGRQLYPQLDLWKTAKPFL--EDWVK 438


>gi|443323107|ref|ZP_21052117.1| putative unusual protein kinase [Gloeocapsa sp. PCC 73106]
 gi|442787162|gb|ELR96885.1| putative unusual protein kinase [Gloeocapsa sp. PCC 73106]
          Length = 550

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 171/414 (41%), Gaps = 68/414 (16%)

Query: 213 RELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTI 272
           R  WL   ++ L   GP FIK GQ  +TR DL P +  + L EL    P  S       I
Sbjct: 45  RARWL---VKQLLDLGPTFIKIGQALSTRADLIPIEYIQALGELQDNVPPFSHVEAIAII 101

Query: 273 ERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESI 332
           E   G  L   F  FE+ P+AS S+ QVH+A L    P Q+     + +KV+ PG+ E  
Sbjct: 102 EAELGNSLEHFFIDFEQKPLASASLGQVHKAKL----PNQE----EIVIKVQRPGLKELF 153

Query: 333 RRDFVIIN-LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRW 391
             DF II+ L   ++  +P +K   L+E  Q+F   +  ++D   E  +  RF  NFR +
Sbjct: 154 NLDFEIIHGLVRFVNRFLPNLKEYELEEIYQEFFKLLYQEIDYIHEGKNAERFRANFRDY 213

Query: 392 KDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVD 451
             V  PK  +      +L   Y  G  ++   + LQ +      +  +G  + LK LL D
Sbjct: 214 PKVKVPKVYWDYTTQKILTLEYLPGIKINDLYN-LQANGINTDKVIELGICSYLKQLLED 272

Query: 452 NFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVA 511
            F  +D HPGN+ V               +  +IF D G   E+    +  +V  F AV 
Sbjct: 273 GFFQSDPHPGNMAV-------------TPEGAIIFYDFGTMTEVKSMAKDQMVSTFFAVL 319

Query: 512 RRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRR 571
           R+D  +  +  + +   +                     P GDLV     +  LL+K R 
Sbjct: 320 RKDTDSVVQTLIYMGLVK---------------------PVGDLVPIKRIVAFLLDKFRD 358

Query: 572 HRVNVD---------------------GNVCTVMVTTLVLEGWQRKLDPGYNVM 604
             V+V                        +  V+ +   L+G  R L+P YN++
Sbjct: 359 RPVDVKAFEEVSQEIYLMFEQQPFRLPAQMTFVLKSLTTLDGVARVLNPEYNLL 412


>gi|378948345|ref|YP_005205833.1| protein UbiB [Pseudomonas fluorescens F113]
 gi|359758359|gb|AEV60438.1| UbiB [Pseudomonas fluorescens F113]
          Length = 534

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 177/392 (45%), Gaps = 25/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP FIK+GQ  +TR DL P D+  +L  L  + P      +   IE   G+++SE+
Sbjct: 63  LQDLGPIFIKFGQILSTRRDLLPEDIADELMRLQDRVPPFDSKVSVALIEEQLGKKISEV 122

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + A
Sbjct: 123 FSRFDVEPLASASVAQVHAAQLK---SGEE-----VVVKVIRPGLKPIIAQDLAWLFILA 174

Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           + +  + A  + L   + VQ +   +  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 175 RAAERLSADARLLHPVDVVQDYEKTIYDELDLLREAANASQLRRNFEGSPLLYVPQVYWD 234

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
              P VLV     G  V+           +K  LA  G       +  D+F HADMHPGN
Sbjct: 235 WCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPGN 293

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V   Q  S         P  I +D G+   L+  D+  L     A  +RD R  A+  
Sbjct: 294 IFVSTVQPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLH 344

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V   
Sbjct: 345 IDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQPQ 401

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 402 LVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|78047327|ref|YP_363502.1| hypothetical protein XCV1771 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78035757|emb|CAJ23448.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 558

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 175/400 (43%), Gaps = 53/400 (13%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP F+K GQ  ATR DL P +  ++LSEL +  P   F   +  +  A G  
Sbjct: 63  VRRALEELGPTFVKLGQVLATRVDLLPPEWIEELSELQNAVPALPFEQIRPQLVAALGME 122

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VI 338
              +F   +E P+A+ S+AQ HRA L        V    V +K+R P +G++I  D  ++
Sbjct: 123 PETVFARLDEQPLAAASLAQTHRAWL--------VDGTPVVLKIRRPDIGDTIDADLRLL 174

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA  + +  P +K  R  E VQQF V +  ++D A E  +  R   NF     V    
Sbjct: 175 ARLAEIVETRAPDLKRYRPSEVVQQFTVSLRRELDFAAEGRNAERIAANFAHDTQV---- 230

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERL--------KSALAHIGTHALLKMLLV 450
                V PAV  E   +   V  ++D + G + L        + ALA  G   +LKM+L 
Sbjct: 231 -----VVPAVYWEWTCESLNVQEFIDGIPGRDLLAVDAAGLDRRALARAGAGIVLKMVLQ 285

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV 510
           D   HAD HPGNI              +     +  +D GM   +S+  R  + +    +
Sbjct: 286 DGCFHADPHPGNI-------------FYLRDGRIAVIDFGMVGRVSEQRRFQVAQLLHGM 332

Query: 511 ARRDGRTA-------AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQ 563
              D           A  +L + + +   +  AF++E      + G P  +L      + 
Sbjct: 333 VSYDAEAVIDVLLEWAGTSLEIDEARLQQDIGAFVDE------YRGVPLKEL-RIGAILG 385

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
            +   +R H + +  ++  ++   L LEG  R+LDP +++
Sbjct: 386 DVTSILRDHGLTLPSDLALMIKAFLTLEGMGRQLDPDFDM 425


>gi|339000004|ref|ZP_08638627.1| ubiquinone biosynthesis protein [Halomonas sp. TD01]
 gi|338763060|gb|EGP18069.1| ubiquinone biosynthesis protein [Halomonas sp. TD01]
          Length = 540

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 173/399 (43%), Gaps = 26/399 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK+GQ  +TR DL P D+  +L  L  + P          +E+     L E 
Sbjct: 57  LEALGPIFIKFGQMLSTRRDLLPEDIADELKRLQDQVPPFPGELAAARVEKELEMSLIEA 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  P+AS SIAQVH A+L   + G+      V VK+  PG+   +R+D  ++   A
Sbjct: 117 FATFDRTPLASASIAQVHAATL---HSGED-----VVVKIIRPGIDRIMRQDMALMYQIA 168

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
           K+   +P  K LR  E ++ +   +  ++DL +EAA+ S+   NF+    +  P   +P 
Sbjct: 169 KLLGKVPDAKRLRPVEVIRDYEATLFDELDLYKEAANTSQLKRNFKDSPLLFVPTIYWPY 228

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
               V+V+   +G  V+  +D L         LA  G       +  DNF HADMHPGNI
Sbjct: 229 TRRHVMVQERIRGVPVAD-LDTLIARGTNLKKLAERGVEIFFTQVFRDNFFHADMHPGNI 287

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
            V     +          P  I +D G+   L++ D+  L     A   +D    A   +
Sbjct: 288 FVNCDDPED---------PQYIAIDCGIVGSLTREDQDYLARNLLAFFHQDYYEVAALHI 338

Query: 524 R---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
               + +        A I  V E       P  D+    + +  L +  RR  + V   +
Sbjct: 339 ESGWVGENTRANEFAAAIRTVCEPIL--EKPLKDISF-GQVLLGLFQTARRFNMEVQPQL 395

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
             +  T L +EG  R+L P  ++  T +  L K  W K 
Sbjct: 396 VLLQKTLLNIEGLGRQLYPDLDLWSTAKPYLEK--WMKQ 432


>gi|418517993|ref|ZP_13084148.1| ubiquinone biosynthesis protein [Xanthomonas axonopodis pv.
           malvacearum str. GSPB1386]
 gi|418519790|ref|ZP_13085841.1| ubiquinone biosynthesis protein [Xanthomonas axonopodis pv.
           malvacearum str. GSPB2388]
 gi|410704450|gb|EKQ62932.1| ubiquinone biosynthesis protein [Xanthomonas axonopodis pv.
           malvacearum str. GSPB2388]
 gi|410705354|gb|EKQ63829.1| ubiquinone biosynthesis protein [Xanthomonas axonopodis pv.
           malvacearum str. GSPB1386]
          Length = 558

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 175/400 (43%), Gaps = 53/400 (13%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP F+K GQ  ATR DL P +  ++LSEL +  P   F   +  +  A G  
Sbjct: 63  VRRALEELGPTFVKLGQVLATRVDLLPPEWIEELSELQNAVPALPFDQIRPQLVAALGME 122

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VI 338
              +F   +E P+A+ S+AQ HRA L        V    V +K+R P +G++I  D  ++
Sbjct: 123 PESVFARLDEQPLAAASLAQTHRAWL--------VDGTPVVLKIRRPDIGDTIDADLRLL 174

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA  + +  P +K  R  E VQQF V +  ++D A E  +  R   NF     V    
Sbjct: 175 ARLAEIVETRAPDLKRYRPSEVVQQFTVSLRRELDFAAEGRNAERIAANFAHDAQV---- 230

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERL--------KSALAHIGTHALLKMLLV 450
                V PAV  E   +   V  ++D + G + L        + ALA  G   +LKM+L 
Sbjct: 231 -----VVPAVYWEWTCESLNVQEFIDGIPGRDLLAVDAAGLDRRALARAGAGIVLKMVLQ 285

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV 510
           D   HAD HPGNI              +     +  +D GM   +S+  R  + +    +
Sbjct: 286 DGCFHADPHPGNI-------------FYLRDGRIAVIDFGMVGRVSEQRRFQVAQLLHGM 332

Query: 511 ARRDGRTA-------AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQ 563
              D           A  +L + + +   +  AF++E      + G P  +L      + 
Sbjct: 333 VSYDAEAVIDVLLEWAGTSLEIDEARLQQDIGAFVDE------YRGVPLKEL-RIGAMLG 385

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
            +   +R H + +  ++  ++   L LEG  R+LDP +++
Sbjct: 386 DVTSILRDHGLTLPSDLALMIKAFLTLEGMGRQLDPDFDM 425


>gi|159037793|ref|YP_001537046.1| hypothetical protein Sare_2194 [Salinispora arenicola CNS-205]
 gi|157916628|gb|ABV98055.1| ABC-1 domain protein [Salinispora arenicola CNS-205]
          Length = 441

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 182/414 (43%), Gaps = 40/414 (9%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P  R      V +T+   GP FIK  Q   TR D+ P  LC +LS L    P  + A ++
Sbjct: 54  PAGRRQAARAVAQTVARLGPTFIKAAQVLGTRRDVVPGLLCDELSMLQDDVPPMTVAQSR 113

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRA-SLRFRYPGQKVKPIVVAVKVRHPGV 328
             +   +G  L+ +F   EE PVASGSIA V+RA +L    P        VA+K+R PG+
Sbjct: 114 AALREVYGDELASVFSSVEETPVASGSIACVYRAVALPDGDP--------VALKLRRPGI 165

Query: 329 GESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
           G  +  D  ++  AA + + +P ++ + + E V      ++ Q+DL RE   LSR     
Sbjct: 166 GPQMTADLGLLRRAAALVARLPQLRGVPVREVVDSLCESVLGQLDLGREGRDLSRL---- 221

Query: 389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDEL--QGHERLKSALAHIGTHALL- 445
            R    S P+ + P VH A           V  +V  L     +R   A+      + L 
Sbjct: 222 -RGDLESIPRVLVPRVHRA----ASRSSAIVMDFVPSLAVDTADRCPPAMRRTFAASTLT 276

Query: 446 ---KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVN 502
              +ML V+ F+H D+HPGN+              F    HV+ LD G +  L+   R  
Sbjct: 277 VVYQMLFVNGFVHCDLHPGNL-------------YFTRTGHVVVLDAGFSVRLTDQMREL 323

Query: 503 LVEFFKAVARRDGRTAAECTLR--LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAE 560
             +FF  ++   G   A   L   L +  +   P AF+E V +  A              
Sbjct: 324 FADFFLNMSVGRGDRCASIVLDSALGRADDADVP-AFVEGVRDLVARNHKLPAKEFSLIA 382

Query: 561 CMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
              +L +  RR+ V     +   +++ LV+EG  R+LDP  +  +T + +L +A
Sbjct: 383 FAGELFDLQRRYGVAATPELVFPLLSLLVVEGTVRELDPDIDFQETARPVLNRA 436


>gi|408501776|ref|YP_006865695.1| conserved hypothetical protein with ABC1 family domain
           [Bifidobacterium asteroides PRL2011]
 gi|408466600|gb|AFU72129.1| conserved hypothetical protein with ABC1 family domain
           [Bifidobacterium asteroides PRL2011]
          Length = 569

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 183/402 (45%), Gaps = 52/402 (12%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R  E  GP F+K GQ  + R ++ P   C++LS+L + A    ++    T+   +GR L 
Sbjct: 64  RMFEALGPTFVKVGQILSMRSEILPEAFCRELSKLRADADPIPYSVVTGTLAAEYGRPLD 123

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           +IF   +  P+ S S+AQVHRA L     G+      VAVKV+ PG+ E++ +D  I+  
Sbjct: 124 QIFSSIDPVPLGSASLAQVHRARL---VSGED-----VAVKVQRPGIQETMAQDIDIMRS 175

Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
             K  S  I + + + +   V++      S+VD  +EA +L+ F      +  +  PKP 
Sbjct: 176 IVKWASRFIRSTQVIDIRGVVEELWETFQSEVDFQQEAENLAEFKDFCASYAYIDCPKPY 235

Query: 401 YPLVHPAVLVETYEQGECVSRYVDEL-QGHERLKSALAHIGTHALLKMLLVDN------- 452
             L    V+V  Y  G  +SR    + QG++     L  IGT       LVDN       
Sbjct: 236 PELCTRHVVVMEYIDGISLSRPAQLVAQGYD-----LKEIGTK------LVDNYATQIMD 284

Query: 453 --FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV 510
             F HAD HPGNI++R                 ++ +D+GM   L K  +  L +   AV
Sbjct: 285 RGFFHADPHPGNIIIR--------------DGCIVLIDLGMVGRLDKVTKSALKDMIFAV 330

Query: 511 ARRDGRTAAECTLRL-----SKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQL 565
            R D    A+  LR      ++ ++ P   A ++ V + F      + D+   AE +  +
Sbjct: 331 GREDSPALAQGLLRFAGTGEARAEDYPYLLADLDAVVQRFGKLDLADLDI---AEYVNAV 387

Query: 566 LEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
           ++   RH + V G+V  V    + LEG   +  P  N++  +
Sbjct: 388 MKLAARHGIKVPGSVTMVARCLVTLEGLLDEFLPEANIVQII 429


>gi|225851179|ref|YP_002731413.1| ubiquinone biosynthesis protein AarF [Persephonella marina EX-H1]
 gi|225646238|gb|ACO04424.1| putative ubiquinone biosynthesis protein AarF [Persephonella marina
           EX-H1]
          Length = 528

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 174/387 (44%), Gaps = 37/387 (9%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP+FIK GQ  +TRPDL P+++ K+L +L  K     F   +K + R +G  L  I
Sbjct: 52  LEKLGPSFIKLGQVLSTRPDLVPQEVIKELIKLQDKVAPIEFETIEKILIRNYGEDLDRI 111

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD----FVII 339
           F   +  P+AS SI+QVH   L+    G+K     VA+K+R PG+ E I  D     +++
Sbjct: 112 FSYIDPEPLASASISQVHTGYLQ---TGEK-----VAIKIRRPGLKELINLDSELMLILV 163

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
               + S     VK L L   + QF    + + +L  EA ++  F  NF  +     PK 
Sbjct: 164 RFLERHSK---TVKELNLPALIHQFKRTTLREANLLIEAQNIQIFRKNFENYPQFYVPKC 220

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
              L H  +LV  + +G  +S   +EL         L+   T A  KM+ VD   HAD H
Sbjct: 221 YTSLTHEEILVTEFIEGIKISE-TEELVKRGFSLKKLSEELTDAYFKMVFVDGIYHADPH 279

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGNI V                  +  +D GM + L K  +    ++  AV   D   A 
Sbjct: 280 PGNIFV-------------MDDGRICAVDYGMISRLPKEKKRLFYDYIIAVTTLDVNLA- 325

Query: 520 ECTLRLSKQQNCPNPKAFIEEVD---EAF-AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
              +   +  N   PK  I E++   E F   +   + D +   E + ++++ VR + + 
Sbjct: 326 ---MHFYEGLNMITPKTDIMELEQDVETFLEKYYNKQLDEIDLKEMVLEVIDIVRNNHLR 382

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYN 602
           +   +  +  T + LEG  R L P +N
Sbjct: 383 LPMEISYLGKTAINLEGTVRSLYPEFN 409


>gi|325982319|ref|YP_004294721.1| 2-polyprenylphenol 6-hydroxylase [Nitrosomonas sp. AL212]
 gi|325531838|gb|ADZ26559.1| 2-polyprenylphenol 6-hydroxylase [Nitrosomonas sp. AL212]
          Length = 504

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 179/393 (45%), Gaps = 29/393 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P D+  +L++L  + P          +E+ + ++++E
Sbjct: 55  ALEKLGPIFVKFGQMLSTRRDLLPHDIADELAKLQDQVPSFPLPLVLAALEKEYDQKINE 114

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F + P+AS S+AQVH A L   + G +     VAVK+  P +   I  D  +++  
Sbjct: 115 VFFEFSDIPIASASVAQVHFAVL---HDGTE-----VAVKILRPNLESIIAHDVALMDTG 166

Query: 343 AKISSVI-PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A ++  +    K L+L + V +FA  +  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 167 AWLAEALWSDGKRLKLRQVVSEFARHLDDELDLMREAANCSQLRRNFLNSPLLLVPEVYW 226

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 V+V    +G  +S +V+ LQ        LA +G       +  D + HADMHPG
Sbjct: 227 DYCRNGVMVMERVKGTPIS-HVERLQAQGIDIPQLARVGVEIFFTQVFRDGYFHADMHPG 285

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V                   I +D G+   LS  D+  L + F A  RRD    A+ 
Sbjct: 286 NIFV-------------GEDSRYIAVDFGIMGTLSDQDKNYLAQNFLAFFRRDYGRVAQA 332

Query: 522 TLRLS---KQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +      K     + ++ I  V E    +  P  ++      + QL +  R+  V +  
Sbjct: 333 HVEAGWAPKNTRVDDFESAIRAVCE--PIFDKPLKEISF-GRVLFQLFQASRQFNVEIQP 389

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 390 QLVLLQKTLLNIEGLGRDLDPNLDLWKTAKPFL 422


>gi|291522273|emb|CBK80566.1| Predicted unusual protein kinase [Coprococcus catus GD/7]
          Length = 532

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 188/414 (45%), Gaps = 46/414 (11%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP +IK GQ  + R D+ P+  C +L +L S      F      I+ AFG    E 
Sbjct: 42  LEDLGPTYIKLGQIMSLRSDILPKRYCDELMKLCSDVAPMPFDQVVDVIQDAFGCPWQEE 101

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F   EE P+ S SIAQVHRA L+    G++     V +KV+  G+  ++ RD   I L  
Sbjct: 102 FQSIEEKPLGSASIAQVHRAVLK---SGEQ-----VVIKVQRKGIYRTMARD---IGLMH 150

Query: 344 KISSVIPAV---KWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF---P 397
           K+  ++P V   + + LD  + +       +++   EAA++  F    R+ +DV+F   P
Sbjct: 151 KVVRLLPPVSIKEMVDLDLVLDELWKVTQEEMNFLTEAANIEEF---HRKNRDVAFVDTP 207

Query: 398 KPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL---LKMLLVDNFI 454
                   P V+V  Y  G      +D+ +  +     L  +G+  +   +K ++VD F 
Sbjct: 208 VLYREYTTPHVIVMEYIDGFS----IDDKENLQENGYDLNEVGSKLIDNFIKQVMVDGFF 263

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           HAD HPGN+ VR  +              ++++D+GM   LS+ DR  +    + +A  D
Sbjct: 264 HADPHPGNLRVRDGK--------------IVWIDMGMMGRLSEHDREEIGRAIEGIALND 309

Query: 515 GRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRV 574
                +  L + + +  P+     E++    A +G+ +   +  AE MQ L+E ++ +++
Sbjct: 310 IGMIQDAVLAIGEFRGKPDQSKLFEDIRNLMAKYGSEDLGNIDIAEIMQDLMEVMKENKI 369

Query: 575 NVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQT-----LLLKADWAKSLSYT 623
            +   +  +      +EG    + P  N+M+         +  + DW K L  +
Sbjct: 370 TMPHGLTMLARGLAHIEGVLADISPEINMMEIASARVKSQMFEEMDWKKELKNS 423


>gi|197310118|gb|ACH61410.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310120|gb|ACH61411.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310122|gb|ACH61412.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310124|gb|ACH61413.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310126|gb|ACH61414.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310128|gb|ACH61415.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310130|gb|ACH61416.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310132|gb|ACH61417.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310134|gb|ACH61418.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310136|gb|ACH61419.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310138|gb|ACH61420.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310140|gb|ACH61421.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310142|gb|ACH61422.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310144|gb|ACH61423.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310146|gb|ACH61424.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310148|gb|ACH61425.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310150|gb|ACH61426.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310152|gb|ACH61427.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310154|gb|ACH61428.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310156|gb|ACH61429.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310158|gb|ACH61430.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310160|gb|ACH61431.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310162|gb|ACH61432.1| ABC family protein [Pseudotsuga menziesii]
 gi|197310164|gb|ACH61433.1| ABC family protein [Pseudotsuga macrocarpa]
          Length = 101

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/101 (72%), Positives = 88/101 (87%)

Query: 260 APEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVV 319
           AP H F+YT++TIE+AFGRR+ EIF+ FEE PVASGSIAQVH+A+L+FRY G+KVKP+ V
Sbjct: 1   APSHKFSYTQQTIEKAFGRRIDEIFEDFEEEPVASGSIAQVHKATLKFRYAGRKVKPMTV 60

Query: 320 AVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDES 360
           AVKVRHPGV E IRRDFVIIN  AK+SS +PA++WLRLDE 
Sbjct: 61  AVKVRHPGVSEVIRRDFVIINWFAKVSSCLPALRWLRLDEG 101


>gi|407701550|ref|YP_006826337.1| protein kinase [Alteromonas macleodii str. 'Black Sea 11']
 gi|407250697|gb|AFT79882.1| protein kinase [Alteromonas macleodii str. 'Black Sea 11']
          Length = 542

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 181/401 (45%), Gaps = 27/401 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSE 282
           L++ GP FIK+GQ  +TR DL P  +  +L+ L  K P  S    ++ I++A G   LSE
Sbjct: 58  LQSLGPVFIKFGQMLSTRRDLLPPAIANELARLQDKVPPFSSDAAQEIIKQALGLSDLSE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
           +F  FE+AP+AS SIAQVH A L+            V VKV  P + ++I  D  ++ +L
Sbjct: 118 LFSEFEKAPLASASIAQVHAAKLKHSNED-------VVVKVLRPDIRDTIVADMELLFSL 170

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +   +P  K LR  E V ++   ++ +++L RE+A+  +   NF     +  PK   
Sbjct: 171 ANVLQRWLPDGKRLRPVEVVVEYRRTIVDELNLLRESANGIQLGRNFEGSDALYVPKIYS 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VLV     G  +S  +D L         LA  G       +  D+F HADMHPG
Sbjct: 231 DYCRSNVLVMERIYGLPISN-IDALLTQNTNMKKLAERGVEVFFTQVFRDSFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V     ++         P  I +D G+   L++ D+  L E F A   RD R  A+ 
Sbjct: 290 NIFVSTEHPEN---------PKYIAIDFGIVGTLNREDKRYLAENFIAFFNRDYRKVAQL 340

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
                 + +  N    +  I  V E    +  P  ++      + QL    RR  + V  
Sbjct: 341 HADSGWVPQDTNIDEFEMAIRTVCE--PIFQKPLAEISF-GNVLLQLFNTARRFNMVVQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
            +  +  T L +EG  R+L P  ++  T +  L   +W K 
Sbjct: 398 QLVLLQKTLLYIEGLGRQLYPQLDLWKTAKPFL--ENWMKE 436


>gi|330501473|ref|YP_004378342.1| 2-octaprenylphenol hydroxylase [Pseudomonas mendocina NK-01]
 gi|328915759|gb|AEB56590.1| 2-octaprenylphenol hydroxylase [Pseudomonas mendocina NK-01]
          Length = 528

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 175/392 (44%), Gaps = 25/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK+GQ  +TR DL P D+  +L+ L  + P          IER  G  +SE+
Sbjct: 63  LEDLGPIFIKFGQLLSTRRDLLPPDIADELAHLQDRVPPFPEDQAIALIERQLGAPVSEV 122

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   IR+D   + L A
Sbjct: 123 FARFDSQPLASASVAQVHAAQLK---TGEE-----VVVKVVRPGLKPVIRQDLAWLFLIA 174

Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           +I+    A  + L   E V  +   +  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 175 RIAEKASADARRLHPVEVVGDYEKTIYDELDLLREAANASQLRRNFEGSPLLYVPQVYWD 234

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
           L  P VLV     G  V+           +K  LA  G       +  D+F HADMHPGN
Sbjct: 235 LCRPQVLVMERIYGIPVTDLATLADQRTDMK-LLAERGVEIFFTQVFRDSFFHADMHPGN 293

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V      S         P  I +D G+   L+  D+  L     A  +RD R  A+  
Sbjct: 294 IFVSTRTPWS---------PQYIAIDCGIVGSLTDEDQNYLARNLLAFFKRDYRKVAQLH 344

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V   
Sbjct: 345 IDSGWVPAETKVNEFEAAIRTVCE--PIFEKPLKDISF-GQLLLRLFQTARRFNMEVQPQ 401

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 402 LVLLQKTLLNIEGLGRQLYPDLDLWSTAQPYL 433


>gi|325927203|ref|ZP_08188464.1| 2-octaprenylphenol hydroxylase [Xanthomonas perforans 91-118]
 gi|346724668|ref|YP_004851337.1| protein kinase [Xanthomonas axonopodis pv. citrumelo F1]
 gi|325542431|gb|EGD13912.1| 2-octaprenylphenol hydroxylase [Xanthomonas perforans 91-118]
 gi|346649415|gb|AEO42039.1| protein kinase [Xanthomonas axonopodis pv. citrumelo F1]
          Length = 558

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 175/400 (43%), Gaps = 53/400 (13%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP F+K GQ  ATR DL P +  ++LSEL +  P   F   +  +  A G  
Sbjct: 63  VRRALEELGPTFVKLGQVLATRVDLLPPEWIEELSELQNAVPALPFEQIRPQLVAALGME 122

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VI 338
              +F   +E P+A+ S+AQ HRA L        V    V +K+R P +G++I  D  ++
Sbjct: 123 PETVFARLDEQPLAAASLAQTHRAWL--------VDGTPVVLKIRRPDIGDTIDADLRLL 174

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA  + +  P +K  R  E VQQF V +  ++D A E  +  R   NF     V    
Sbjct: 175 ARLAEIVETRAPDLKRYRPSEVVQQFTVSLRRELDFAAEGRNAERIAANFAHDTQV---- 230

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERL--------KSALAHIGTHALLKMLLV 450
                V PAV  E   +   V  ++D + G + L        + ALA  G   +LKM+L 
Sbjct: 231 -----VVPAVYWEWTCESLNVQEFIDGIPGRDLLAVDAAGLDRRALARAGAGIVLKMVLQ 285

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV 510
           D   HAD HPGNI              +     +  +D GM   +S+  R  + +    +
Sbjct: 286 DGCFHADPHPGNI-------------FYLRDGRIAVIDFGMVGRVSEQRRFQVAQLLHGM 332

Query: 511 ARRDGRTA-------AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQ 563
              D           A  +L + + +   +  AF++E      + G P  +L      + 
Sbjct: 333 VSYDAEAVIDVLLEWAGTSLEIDEARLQQDIGAFVDE------YRGVPLKEL-RIGAMLG 385

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
            +   +R H + +  ++  ++   L LEG  R+LDP +++
Sbjct: 386 DVTSILRDHGLTLPSDLALMIKAFLTLEGMGRQLDPDFDM 425


>gi|428210893|ref|YP_007084037.1| putative unusual protein kinase [Oscillatoria acuminata PCC 6304]
 gi|427999274|gb|AFY80117.1| putative unusual protein kinase [Oscillatoria acuminata PCC 6304]
          Length = 557

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 175/407 (42%), Gaps = 25/407 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           TL   GP FIK GQ  +TR D+ P++  K L+ L  + PE S       IE   G  L  
Sbjct: 61  TLLDLGPTFIKIGQALSTRADILPKEYVKALTTLQDQVPEFSSVEAIAVIESELGNSLYS 120

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+E P+A+ S+ QVH+A L   + G+      V +KV+ PG+ +  + DF  +   
Sbjct: 121 LFRDFDEFPIAAASLGQVHKARL---HTGED-----VVIKVQRPGLEKLFQLDFQALQDL 172

Query: 343 AKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
            KI +   P  +   L E  Q+F  F+  ++D  +E  +  RF  NFR + ++  PK  +
Sbjct: 173 VKICNRFFPWTRKYELQEIYQEFVNFLAQEIDYVQEGKNADRFRENFRDYSNIIVPKIYW 232

Query: 402 PLVHPAVLVETYEQGECVS-RYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                 +L   Y  G  ++ R   E  G +     +  +G    LK LL D F  AD HP
Sbjct: 233 RYTSRKILAMEYLPGIKINDRQTLESCGID--VKQVNVLGICCYLKQLLEDGFFQADPHP 290

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GN+ V               +  +IF D GM AE+    +  ++  F AV ++D      
Sbjct: 291 GNMAV-------------NQEGSLIFYDFGMMAEMKSLAKDRMIRTFFAVLKKDTEAVLA 337

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
             + +      P+ K     +      +     ++    E   +L    ++    +   +
Sbjct: 338 SLIDMGLVVPVPDMKPVRRMITFLLENFTEKPLEIKALRELRSELYAMFQQQPFRLPAQM 397

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYTIDGL 627
             ++ +   L+G  R LDP YN +   +  + +   A+  +  I GL
Sbjct: 398 TFILKSLTTLDGIARTLDPQYNPVACAKPFIRRVTMARGKTSLISGL 444


>gi|448240025|ref|YP_007404078.1| 2-octaprenylphenol hydroxylase [Serratia marcescens WW4]
 gi|445210389|gb|AGE16059.1| 2-octaprenylphenol hydroxylase [Serratia marcescens WW4]
 gi|453064381|gb|EMF05347.1| ubiquinone biosynthesis protein UbiB [Serratia marcescens VGH107]
          Length = 543

 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 178/392 (45%), Gaps = 24/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP +IK+GQ  +TR DLFP  +  +L+ L  +      A  +K IE A G  L   
Sbjct: 61  LQELGPVWIKFGQMMSTRRDLFPPHIADQLTLLQDRVAPFDGALARKHIELAMGGPLETW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           FD F++ P+AS SIAQVH A  R +  GQ+     V +KV  P +G  I+ D  ++  LA
Sbjct: 121 FDDFDQQPLASASIAQVHTA--RLKTTGQE-----VVLKVIRPDIGPIIKADVRLMYRLA 173

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  ++P  + LR  E V+++   ++ +++L REAA+  +   NF     +  P+    
Sbjct: 174 GWVPKLLPDGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFDGSPMLYVPEVYSD 233

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
               +VLV     G  VS      Q    +K  LA  G       +  D+F HADMHPGN
Sbjct: 234 YCRESVLVMERIYGIPVSDIATLEQQGTNMK-LLAERGVQVFFTQVFRDSFFHADMHPGN 292

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V     +          P  I +D G+   L+K D+  L E F A   RD R  AE  
Sbjct: 293 IFVSYEHPED---------PCYIGIDCGIVGSLNKDDKRYLAENFIAFFNRDYRKVAELH 343

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    + +  N  + +  I  V E    +  P  ++      +  L    RR  + V   
Sbjct: 344 VDSGWVPRDTNVEDFEFAIRTVCE--PIFEKPLAEISF-GNVLLNLFNTARRFNMEVQPQ 400

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L P  ++  T +  L
Sbjct: 401 LVLLQKTLLYVEGLGRQLYPQLDLWTTAKPFL 432


>gi|254251435|ref|ZP_04944753.1| hypothetical protein BDAG_00620 [Burkholderia dolosa AUO158]
 gi|124894044|gb|EAY67924.1| hypothetical protein BDAG_00620 [Burkholderia dolosa AUO158]
          Length = 525

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 176/393 (44%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL   D   +L++L  + P    A     IE++ G  + E+
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLSVDFANELAKLQDQVPPFDSAVAIAIIEKSLGAPVDEL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           FD FE  PVAS SIAQVH A L+    GQ      VAVKV  P +   I  D  ++ ++A
Sbjct: 116 FDEFEREPVASASIAQVHFAKLK---QGQHAGK-AVAVKVLRPNMLPVIDSDLALLRDIA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 172 TWTERMWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWD 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VLV     G  +S+ V+ L+        LA  G       +  D F HADMHPGN
Sbjct: 232 CSTSQVLVMERMSGVPISQ-VETLRSAGVDIKKLAREGVEIFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +      +          I LD G+   LS  D+  L + F A  +RD    A   
Sbjct: 291 IQVSLDPNTFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLH 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
           L    +     P+  +EE++ A      P  D     +   + + +L    RR  V +  
Sbjct: 342 L----ESGWVPPETRVEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 398 QLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|385792379|ref|YP_005825355.1| hypothetical protein [Francisella cf. novicida Fx1]
 gi|328676525|gb|AEB27395.1| Ubiquinone biosynthesis monooxygenase UbiB [Francisella cf.
           novicida Fx1]
          Length = 515

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 190/426 (44%), Gaps = 33/426 (7%)

Query: 200 MMAPFADSFGPQFRELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHS 258
           M+ PF   +  + R L   V +R  LE  GP FIK+GQ  + R DL P D+ K++S+L  
Sbjct: 1   MLNPFY--YSRRVRRLEHGVRIREALEKLGPIFIKFGQALSVRADLLPPDVIKEVSKLQD 58

Query: 259 KAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIV 318
             P        + IE+A  + ++EIF  FE +P+AS S+AQVH A L+            
Sbjct: 59  NVPPFDNKIAAEQIEKAAKKPINEIFKSFESSPLASASVAQVHAAILQ--------NDDK 110

Query: 319 VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREA 378
           V VKV  PG+ + ++ D  ++   A + S +  ++  +  E V++       ++DL REA
Sbjct: 111 VVVKVLRPGIEKILKLDTSLMLFFATLLSKLKEIRRFKPVEIVKEINQSFFDELDLVREA 170

Query: 379 AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS--RYVDELQGHERLKSAL 436
           ++ S+   NF        PK  +      V+V     G  VS    +D L    RL   L
Sbjct: 171 SNASQIRRNFENSAIHYVPKIYWEYTSSTVMVMERVGGVRVSDIETLDALGVDRRL---L 227

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS 496
           A  G       +  D F HADMHPGN+ + V+           + P  I +D G+   L+
Sbjct: 228 AQRGVEIFYSQVFDDCFFHADMHPGNMFIDVSNP---------ADPKYISIDFGIVGTLN 278

Query: 497 KTDRVNLVEFFKAVARRDGRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEG 553
           + D+  L   F A  +RD R  AE  +    +         ++ I  V E        E 
Sbjct: 279 RDDQRYLAGNFLAFFKRDYRKVAELHIESGWVPSDTRVDVLESAIRTVCEPIFEKPMKEI 338

Query: 554 DLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            L +    + QL    RR  +N+   +  +  T   +EG  +KL P  N+ +T + +L K
Sbjct: 339 SLGY---TLMQLFVVARRFNMNIQPQLTLLQKTLFHVEGLGQKLCPELNIWETSRPILEK 395

Query: 614 ADWAKS 619
             W K 
Sbjct: 396 --WMKE 399


>gi|398898391|ref|ZP_10648287.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM50]
 gi|398184195|gb|EJM71652.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM50]
          Length = 534

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 179/396 (45%), Gaps = 31/396 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L +L  + P      + + IE   G+++SE
Sbjct: 62  ALQDLGPIFIKFGQILSTRRDLLPEDIADELMKLQDRVPPFDSQVSIRLIEEQLGKKISE 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD----FVI 338
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D    F++
Sbjct: 122 VFSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPIIAQDLAWLFIL 173

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
              A K+S+     + L   + V  +   +  ++DL REAA+ S+   NF     +  P+
Sbjct: 174 ARAAEKLSA---DARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQ 230

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +    P VLV     G  V+           +K  LA  G       +  D+F HADM
Sbjct: 231 VYWDWCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADM 289

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI V   Q  S         P  I +D G+   L+  D+  L     A  +RD R  
Sbjct: 290 HPGNIFVSTVQPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRV 340

Query: 519 AECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
           A+  +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + 
Sbjct: 341 AQLHIDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNME 397

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V   +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 398 VQPQLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|358635543|dbj|BAL22840.1| putative ubiquinone biosynthesis protein [Azoarcus sp. KH32C]
          Length = 509

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 179/396 (45%), Gaps = 33/396 (8%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE+ GP F+K+GQ  +TR DL P DL  +L+ L  + P        + +E  +G+ + 
Sbjct: 54  RALESLGPIFVKFGQMLSTRRDLLPADLADELALLQDRVPPFPTEQALEVLEDFYGKPVD 113

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           ++F  F   PVAS S+AQVH A L             VAVK+  PG+   I  D  ++  
Sbjct: 114 DVFVNFARTPVASASVAQVHFAEL--------PDGTEVAVKILRPGIERVIEHDLALLET 165

Query: 342 AA-KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           AA  +  +    + L+  E V +F+ ++  ++DL REA++ S+   NF   K +  P+  
Sbjct: 166 AAMMLDKLWVEGRRLKPREVVAEFSKYLHDELDLMREASNCSQLRRNFTDSKLLVVPEVH 225

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +     +V+V     G  +S+ ++ L+       AL+  G       +  D F HADMHP
Sbjct: 226 WDWCGKSVMVMERMHGVPISQ-IEALRAQGTDLKALSRAGVEIFFTQVFRDGFFHADMHP 284

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V    +              I LD G+   L++ D+  L + F A  +RD    A 
Sbjct: 285 GNIFVHADGR-------------YIALDFGIVGTLTEVDKNYLAQNFLAFFKRDYNRVAR 331

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
             +    +      K  ++E + A        +  P  D+    + + +L +  RR  + 
Sbjct: 332 AHI----EAGWVPAKTRVDEFEGAIRAVCEPIFDRPLKDISF-GKTLLRLFQTARRFEME 386

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 387 VQPQLVLLQKTLLNIEGLGRQLDPELDLWKTAKPFL 422


>gi|443471207|ref|ZP_21061280.1| Ubiquinone biosynthesis monooxygenase UbiB [Pseudomonas
           pseudoalcaligenes KF707]
 gi|442901110|gb|ELS27109.1| Ubiquinone biosynthesis monooxygenase UbiB [Pseudomonas
           pseudoalcaligenes KF707]
          Length = 530

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 181/396 (45%), Gaps = 33/396 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK+GQ  +TR DL P D+  +L+ L  + P  S       IE   G  + ++
Sbjct: 63  LEDLGPIFIKFGQLLSTRRDLMPPDIADELARLQDQVPPFSPEKAVARIEEELGASVGDL 122

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+ AP+AS S+AQVH A L+    G++     V VKV  P +   IR+D   + L A
Sbjct: 123 FARFDVAPLASASVAQVHAAQLK---SGEE-----VVVKVIRPNLRPIIRQDLAWLFLLA 174

Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           +++    A  + LR  E V  +A  +  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 175 RLAERASADARRLRPVEVVDDYAKTIYDELDLLREAANASQLRRNFDGSPLLYVPQVYWD 234

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
           L  P VLV     G  V+           +K  LA  G       +  D+F HADMHPGN
Sbjct: 235 LCRPKVLVMERIYGIPVTDLATLADQRTDMK-LLAERGVEIFFTQVFRDSFFHADMHPGN 293

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDR----VNLVEFFKAVARRDGRTA 518
           I V   Q  +         P  I +D G+   L+  D+     NL+ FFK    RD R  
Sbjct: 294 IFVSTRQPWN---------PQYIAIDCGIIGSLTPEDQDYLARNLIAFFK----RDYRRV 340

Query: 519 AECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
           A+  +    +  +    + +A I  V E    +  P  D+    + + +L +  RR  + 
Sbjct: 341 AQLHIDSGWVPPETRVNDFEAAIRTVCE--PIFEKPLKDISF-GQLLLRLFQTARRFNME 397

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V   +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 398 VQPQLVLLQKTLLNIEGLGRQLYPDLDLWSTAQPFL 433


>gi|118497066|ref|YP_898116.1| 2-octaprenylphenol hydroxylase [Francisella novicida U112]
 gi|118422972|gb|ABK89362.1| 2-octaprenylphenol hydroxylase [Francisella novicida U112]
          Length = 552

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 191/427 (44%), Gaps = 33/427 (7%)

Query: 199 IMMAPFADSFGPQFRELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELH 257
           +++ PF   +  + R L   V +R  LE  GP FIK+GQ  + R DL P D+ K++S+L 
Sbjct: 37  LLLNPFY--YSRRVRRLEHGVRIREALEKLGPIFIKFGQALSVRADLLPPDVIKEVSKLQ 94

Query: 258 SKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPI 317
              P        + IE+A  + ++EIF  FE +P+AS S+AQVH A L+           
Sbjct: 95  DNVPPFDNKIAAEQIEKAAKKPINEIFKSFESSPLASASVAQVHAAVLQ--------NDD 146

Query: 318 VVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLARE 377
            V VKV  PG+ + ++ D  ++   A + S +  ++  +  E V++       ++DL RE
Sbjct: 147 KVVVKVLRPGIEKILKLDTSLMLFFATLLSKLKEIRRFKPVEIVKEINQSFFDELDLVRE 206

Query: 378 AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS--RYVDELQGHERLKSA 435
           A++ S+   NF        PK  +      V+V     G  VS    +D L    RL   
Sbjct: 207 ASNASQIRRNFENSAIHYVPKIYWEYTSSTVMVMERVGGVRVSDIETLDALGVDRRL--- 263

Query: 436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL 495
           LA  G       +  D F HADMHPGN+ + V+           + P  I +D G+   L
Sbjct: 264 LAQRGVEIFYSQVFDDCFFHADMHPGNMFIDVSNP---------ADPKYISIDFGIVGTL 314

Query: 496 SKTDRVNLVEFFKAVARRDGRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPE 552
           ++ D+  L   F A  +RD R  AE  +    +         ++ I  V E        E
Sbjct: 315 NRDDQRYLAGNFLAFFKRDYRKVAELHIESGWVPSDTRVDVLESAIRTVCEPIFEKPMKE 374

Query: 553 GDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLL 612
             L +    + QL    RR  +N+   +  +  T   +EG  +KL P  N+ +T + +L 
Sbjct: 375 ISLGY---TLMQLFAVARRFNMNIQPQLTLLQKTLFHVEGLGQKLCPELNIWETSRPILE 431

Query: 613 KADWAKS 619
           K  W K 
Sbjct: 432 K--WMKE 436


>gi|337754486|ref|YP_004646997.1| Ubiquinone biosynthesis monooxygenase UbiB [Francisella sp.
           TX077308]
 gi|336446091|gb|AEI35397.1| Ubiquinone biosynthesis monooxygenase UbiB [Francisella sp.
           TX077308]
          Length = 551

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 195/430 (45%), Gaps = 39/430 (9%)

Query: 199 IMMAPFADSFGPQFRELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELH 257
           +++ PF   + P+ R+L   V +R  LE  GP FIK+GQ  + R DL P ++ K++S+L 
Sbjct: 37  LLVNPFY--YSPRIRKLEHGVRIREALERLGPIFIKFGQALSVRADLLPPEVIKEVSKLQ 94

Query: 258 SKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPI 317
              P        + IE A  + +++IF  FE  P+AS S+AQVH A L+     +K    
Sbjct: 95  DNVPPFDNDIAAQQIENAAKKPITKIFKSFESTPLASASVAQVHGAVLQ---NDEK---- 147

Query: 318 VVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLARE 377
            V VKV  PG+ + ++ D  ++   A + S +  +K  +  E V++       ++DL RE
Sbjct: 148 -VVVKVLRPGIEKILKLDTSLMLFFATLLSKLKEIKRFKPVEIVKEINQSFFDELDLVRE 206

Query: 378 AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS--RYVDELQGHERLKSA 435
           A++ S+   NF        PK  +      V+V     G  VS    +D L    RL   
Sbjct: 207 ASNASQIRRNFEGSTIHYVPKIYWEYTSSTVMVMERVSGVRVSDIETLDALGVDRRL--- 263

Query: 436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL 495
           LA  G       +  D F HADMHPGN+ + V            + P  I +D G+   L
Sbjct: 264 LAQRGVEIFYSQVFDDCFFHADMHPGNMFIDVTNP---------ADPKYISIDFGIVGTL 314

Query: 496 SKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL 555
           ++ D+  L   F A  +RD R  AE  +     ++   P    E+V E+ A     E   
Sbjct: 315 NRDDQRYLAGNFLAFFKRDYRKVAELHI-----ESGWVPSDTREDVLES-AIRTVCEPIF 368

Query: 556 VHPAE------CMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQT 609
             P +       + QL    RR  +N+   +  +  T   +EG  +KL P  N+ +T + 
Sbjct: 369 EKPMKEISLGYTLMQLFAVARRFNMNIQPQLTLLQKTLFHVEGLGQKLCPELNIWETSRP 428

Query: 610 LLLKADWAKS 619
           +L K  W K 
Sbjct: 429 ILEK--WMKE 436


>gi|357038519|ref|ZP_09100316.1| ABC-1 domain-containing protein [Desulfotomaculum gibsoniae DSM
           7213]
 gi|355359311|gb|EHG07073.1| ABC-1 domain-containing protein [Desulfotomaculum gibsoniae DSM
           7213]
          Length = 554

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 178/393 (45%), Gaps = 31/393 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP FIK GQ  +TR DLF     K+L +L  + P  SFA  K+ +E   G+ LS+
Sbjct: 64  VLEELGPTFIKLGQLFSTRSDLFAPVFIKELEKLQDQVPPASFADIKELLELELGQTLSQ 123

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           IF+ F   P+A+ SI QVH A L     G++     VAVKV+ P +   +  D  I+ +L
Sbjct: 124 IFNYFNPMPLAAASIGQVHEAQL---VNGRR-----VAVKVQRPNIRAKMEVDMEIMYDL 175

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A          +  +  E V++F   +  ++D   EA H     +NF   + V  P   +
Sbjct: 176 AGLAERHTTWGEIYKFTEMVEEFEHILHEELDFILEARHAETLAHNFAGERHVVIPAVYW 235

Query: 402 PLVHPAVLVETYEQG-ECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                 VL   + +G +    +     GH+   + +A     A+LK +L+D F HAD HP
Sbjct: 236 DYTTKKVLTLEFLEGIKLTESHKLVAAGHD--PAVMARQLVEAVLKQILMDGFFHADPHP 293

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GN+L   A +             + FLD GM   L K  R  +++    +  +D      
Sbjct: 294 GNLLALPAGR-------------LAFLDFGMMGYLEKELRNKVIKLVFGLINKDSTEILR 340

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             +    L  Q N    +  IE++ E   ++  P G  V  AE +  ++    R+R+ V 
Sbjct: 341 AIMSFGVLPAQINMYQLRRDIEQLRE--KYYQVPLGQ-VSAAESLGDIMNLAYRYRIKVP 397

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTL 610
             +  V+   ++ EG   +LDP  +++  ++ L
Sbjct: 398 IELNMVIKALIITEGIATRLDPQISIVQVIEPL 430


>gi|91774746|ref|YP_544502.1| 2-octaprenylphenol hydroxylase [Methylobacillus flagellatus KT]
 gi|91708733|gb|ABE48661.1| 2-octaprenylphenol hydroxylase [Methylobacillus flagellatus KT]
          Length = 559

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 174/391 (44%), Gaps = 24/391 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP F+K GQ  ATRPD+FP +   + S+L  + P   F      ++ A G+   E+
Sbjct: 68  LQELGPTFVKMGQVLATRPDIFPPNWIAEFSKLQDQVPPVPFEDMLPGLQEALGKSPFEV 127

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD-FVIINLA 342
           F  F+  PVA  SIAQV++A L+   P        V +KVR PG+ E+I  D  ++ +LA
Sbjct: 128 FRDFDTTPVAGASIAQVYQAKLQDGTP--------VILKVRRPGIRENIDADLRLLHHLA 179

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             I + +   +     E V QF+  +  ++DLA E  +  RF  NF    +  F K  + 
Sbjct: 180 RLIEAEVEEARRFNPTEIVDQFSKSLKRELDLALEGRNTERFARNFLNDPNTRFAKIYWE 239

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
               +VLV     G   +   +  Q    L   LA  G  A++KM+L+D F HAD HPGN
Sbjct: 240 YTSESVLVMEKIDGIPGNSLEEARQAGMNL-PLLAARGADAVMKMVLIDGFFHADPHPGN 298

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I              F  +  +  +D GM   +S   R  + +   A+  RD  T  +  
Sbjct: 299 I-------------FFLPENKIAVIDCGMVGRISLDRRNEIADLLAALVSRDIETLRDIL 345

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCT 582
           +  +        K    +VDE    +       +     +  L   +R + ++V  ++  
Sbjct: 346 IAWAGNVVVDEDK-LGADVDEFICTYDNAPLKHISFGTLLNDLTTIMRENHLSVPPDLTM 404

Query: 583 VMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +    + LEG  R+LDP + ++  L   + K
Sbjct: 405 LFKALVTLEGLGRQLDPDFQIVSHLTPFVKK 435


>gi|406915054|gb|EKD54180.1| hypothetical protein ACD_60C00118G0001 [uncultured bacterium]
          Length = 540

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 176/387 (45%), Gaps = 26/387 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK GQ  +TR DL P D+ ++L++L  + P  S    +K IE +       I
Sbjct: 62  LEDLGPIFIKAGQVLSTRRDLLPDDIAEELAKLQDRVPPFSGKLAQKMIEDSLNVSTEMI 121

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+   +AS SIAQVH A+L     G +     V VKV  PG+ + I RD  ++   A
Sbjct: 122 FQEFDLEALASASIAQVHAATL---LSGDR-----VVVKVLRPGIKKIIDRDLDLLRTIA 173

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            I+      K  +  E V + A  +  ++DL REAA+ S+   NF+    +  P+  +P 
Sbjct: 174 NIAERFTDAKRFKPKELVAEVAHTLQDELDLQREAANASQLRRNFQHSDLLYIPEIYWPY 233

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
              +VLV    +G  +   +  L+        LA  G       +  D+F HADMHPGNI
Sbjct: 234 SRQSVLVMERIEGIPIHN-IAMLKASGVNMKKLAERGIEIFFTQVFRDSFFHADMHPGNI 292

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
            V +       K L    PH I +D G+   L+  D+  L E   A  +RD +  AE   
Sbjct: 293 FVDL-------KNL--DDPHYIAVDFGIVGSLNTKDQRYLAENMLAFFKRDYQRVAE--- 340

Query: 524 RLSKQQNCPNPKAFIEEVDEAFAFWGTP--EGDL--VHPAECMQQLLEKVRRHRVNVDGN 579
            L        P   I++ + A      P  E  L  +   + + +L +  +R  +N+   
Sbjct: 341 -LHVASGWLPPDTRIDQFEGAIRAVCEPIFERPLKEISFGQLLLRLFQTAQRFNINIQPQ 399

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           +  +  T L +EG  R++ P  ++  T
Sbjct: 400 LILLQKTLLNIEGVGRQIYPELDLWKT 426


>gi|398851417|ref|ZP_10608103.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM80]
 gi|398246926|gb|EJN32400.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM80]
          Length = 534

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 177/393 (45%), Gaps = 25/393 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L  L  + P      + K IE   G+++S+
Sbjct: 62  ALQDLGPIFIKFGQILSTRRDLLPEDIADELMRLQDRVPPFDSQLSIKLIEEQLGKKISD 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + 
Sbjct: 122 VFSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPIIAQDLAWLFIL 173

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ +  + A  + L   + VQ +   +  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 174 ARAAEKLSADARLLHPVDVVQDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  V+           +K  LA  G       +  D+F HADMHPG
Sbjct: 234 DWCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V      S         P  I +D G+   L+  D+  L     A  +RD R  A+ 
Sbjct: 293 NIFVSTVNPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQL 343

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V  
Sbjct: 344 HIDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQP 400

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 401 QLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|187479545|ref|YP_787570.1| putative ubiquinone biosynthesis protein UbiB [Bordetella avium
           197N]
 gi|115424132|emb|CAJ50685.1| probable ubiquinone biosynthesis protein [Bordetella avium 197N]
          Length = 517

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 185/399 (46%), Gaps = 31/399 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE+ GP F+K+GQ  +TR DL P D+  +L+ L  + P    A     IE A G   +
Sbjct: 55  RALESLGPIFVKFGQVLSTRRDLIPADIANELALLQDRVPPFPSAQAAACIEAALGAPPA 114

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           ++F  F+  PVAS SIAQVH A L   + G+K     VAVKV  PG+   I +D  ++ +
Sbjct: 115 QLFAQFDTDPVASASIAQVHFAVL---HDGRK-----VAVKVLRPGMRAVIDKDMGLLRI 166

Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF----RRWKDVSF 396
            A+ I  + P  + L+  E V +F  ++  ++DL REAA+ S+   NF     R   +  
Sbjct: 167 VARVIERLGPDGRRLKPREVVAEFDKYLHDELDLVREAANCSQLRRNFGPESGRGDILIV 226

Query: 397 PKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHA 456
           P+ ++      V       G  V + +D L+        LA  G       +  D F HA
Sbjct: 227 PEVIWEYTASTVFTMERMYGIPVGQ-IDRLRAAGIDIPTLARSGVEIFFTQVFTDGFFHA 285

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNI   V+   ++  R        I LD G+   LS+ D+  L + F A  RRD R
Sbjct: 286 DMHPGNIY--VSDNPATLGR-------YIALDFGIVGSLSEFDKNYLAQNFLAFFRRDYR 336

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRH 572
             A+    L  +     P    EE++ A      P  D     +   + + +L +  RR 
Sbjct: 337 RVAQ----LHIESGWVPPDTREEELEGAVRAVCEPYFDRPLAEISLGQVLLRLFQTSRRF 392

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            V +   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 393 NVEIQPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAKPYL 431


>gi|456737493|gb|EMF62188.1| Ubiquinone biosynthesis monooxygenase UbiB [Stenotrophomonas
           maltophilia EPM1]
          Length = 551

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 184/396 (46%), Gaps = 25/396 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP F+K+GQ  +TR DL P D+  +L+ L  +         ++ +E A G  +SE
Sbjct: 58  ALQDLGPIFVKFGQILSTRRDLVPPDVANELTLLQDRVKPFDGETARRIVEDALGLPVSE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
            F  F+  P+AS SIAQVH A+L     G++     V VKV  PG+ + I  D  ++N L
Sbjct: 118 AFASFDTEPLASASIAQVHAATL---ADGRQ-----VVVKVLRPGIEKQIDADIALLNSL 169

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +    P    +R  E V +    + +++DL RE A+ S     +    D+  P+ ++
Sbjct: 170 AALVERTHPRADKIRPREVVAEVENTLAAELDLQREGANASVLRRFWENSDDLYVPEVIW 229

Query: 402 PLVHPAVLVETYEQGECV-SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
              H A    T E+   + S  +  L      + ALA  G       +  DNF HAD H 
Sbjct: 230 S--HTAERALTLERVWGIPSDDISALDKAGIDRKALAAKGVRVFYTQVFRDNFFHADAHA 287

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V     +       R+ P  I LD G+  +LS+ D+  L E F A+  RD R  AE
Sbjct: 288 GNIWVDTDPAR-------RANPRFIALDFGIMGQLSQEDQYYLAENFMAIFNRDYRRIAE 340

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             ++   +       + +A +  V E +    T     +  AE + +L    +R+++ + 
Sbjct: 341 LHVQARWMPDHVRIDDLEAAVRSVCEPYF---TRPLSQISLAEVLMKLFRVAQRYQLTLQ 397

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +  +  T L +EG  R+LDP  ++    + +L K
Sbjct: 398 PQLILLQKTLLNIEGVGRQLDPQIDIWAVAKPVLAK 433


>gi|208780520|ref|ZP_03247860.1| 2-polyprenylphenol 6-hydroxylase [Francisella novicida FTG]
 gi|254372426|ref|ZP_04987916.1| 2-octaprenylphenol hydroxylase [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|254373893|ref|ZP_04989375.1| 2-polyprenylphenol 6-hydroxylase [Francisella novicida GA99-3548]
 gi|151570154|gb|EDN35808.1| 2-octaprenylphenol hydroxylase [Francisella novicida GA99-3549]
 gi|151571613|gb|EDN37267.1| 2-polyprenylphenol 6-hydroxylase [Francisella novicida GA99-3548]
 gi|208743666|gb|EDZ89970.1| 2-polyprenylphenol 6-hydroxylase [Francisella novicida FTG]
          Length = 552

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 191/427 (44%), Gaps = 33/427 (7%)

Query: 199 IMMAPFADSFGPQFRELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELH 257
           +++ PF   +  + R L   V +R  LE  GP FIK+GQ  + R DL P D+ K++S+L 
Sbjct: 37  LLLNPFY--YSRRVRRLEHGVRIREALEKLGPIFIKFGQALSVRADLLPPDVIKEVSKLQ 94

Query: 258 SKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPI 317
              P        + IE+A  + ++EIF  FE +P+AS S+AQVH A L+           
Sbjct: 95  DNVPPFDNKIAAEQIEKAAKKPINEIFKSFESSPLASASVAQVHGAVLQ--------NDD 146

Query: 318 VVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLARE 377
            V VKV  PG+ + ++ D  ++   A + S +  ++  +  E V++       ++DL RE
Sbjct: 147 KVVVKVLRPGIEKILKLDTSLMLFFATLLSKLKEIRRFKPVEIVKEINQSFFDELDLVRE 206

Query: 378 AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS--RYVDELQGHERLKSA 435
           A++ S+   NF        PK  +      V+V     G  VS    +D L    RL   
Sbjct: 207 ASNASQIRRNFENSAIHYVPKIYWEYTSSTVMVMERVGGVRVSDIETLDALGVDRRL--- 263

Query: 436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL 495
           LA  G       +  D F HADMHPGN+ + V+           + P  I +D G+   L
Sbjct: 264 LAQRGVEIFYSQVFDDCFFHADMHPGNMFIDVSNP---------ADPKYISIDFGIVGTL 314

Query: 496 SKTDRVNLVEFFKAVARRDGRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPE 552
           ++ D+  L   F A  +RD R  AE  +    +         ++ I  V E        E
Sbjct: 315 NRDDQRYLAGNFLAFFKRDYRKVAELHIESGWVPSDTRVDVLESAIRTVCEPIFEKPMKE 374

Query: 553 GDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLL 612
             L +    + QL    RR  +N+   +  +  T   +EG  +KL P  N+ +T + +L 
Sbjct: 375 ISLGY---TLMQLFAVARRFNMNIQPQLTLLQKTLFHVEGLGQKLCPELNIWETSRPILE 431

Query: 613 KADWAKS 619
           K  W K 
Sbjct: 432 K--WMKE 436


>gi|419952982|ref|ZP_14469128.1| ubiquinone biosynthesis protein UbiB [Pseudomonas stutzeri TS44]
 gi|387970258|gb|EIK54537.1| ubiquinone biosynthesis protein UbiB [Pseudomonas stutzeri TS44]
          Length = 536

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 178/392 (45%), Gaps = 25/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK+GQ  +TR DL P DL  +L+ L  + P    A     IER  G  + E+
Sbjct: 64  LEGLGPIFIKFGQLLSTRRDLLPADLADELAMLQDRVPPFDSAQAIALIERQLGAPVGEL 123

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  P+AS S+AQVH A L   + G++     V VKV  P +   IR+D   + + A
Sbjct: 124 FARFDSTPLASASVAQVHAAQL---HSGEE-----VIVKVVRPNLKPVIRQDLAWLFMLA 175

Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           K +  +    + L L E V+ +A  +  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 176 KTAERLSIDARRLHLVEVVEDYARTIHDELDLLREAANASQLRRNFEGSPLLYVPQIHWD 235

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
              P VLV     G  V+      + +  ++  LA  G       +  D+F HADMHPGN
Sbjct: 236 YCRPQVLVMERIYGVPVTDMAALARQNTDMRQ-LAERGVEIFFTQVFRDSFFHADMHPGN 294

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V   Q  S         P  I +D G+   L+  D+  L     A  +RD R  A+  
Sbjct: 295 IFVSTQQPWS---------PQYIAVDFGIVGSLTPEDQDYLARNLMAFFKRDYRKVAQLH 345

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V   
Sbjct: 346 IDSGWVPAETKVNEFEAAIRTVCE--PIFEKPLKDISF-GQLLVRLFQVARRFNMEVQPQ 402

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 403 LVLLQKTLLNIEGLGRELYPQLDLWTTAQPYL 434


>gi|344205588|ref|YP_004790729.1| 2-polyprenylphenol 6-hydroxylase [Stenotrophomonas maltophilia JV3]
 gi|343776950|gb|AEM49503.1| 2-polyprenylphenol 6-hydroxylase [Stenotrophomonas maltophilia JV3]
          Length = 551

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 184/396 (46%), Gaps = 25/396 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP F+K+GQ  +TR DL P D+  +L+ L  +         ++ +E A G  +SE
Sbjct: 58  ALQDLGPIFVKFGQILSTRRDLVPPDVANELTLLQDRVKPFDGDTARRIVEEALGLPVSE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
            F  F+  P+AS SIAQVH A+L     G++     V VKV  PG+ + I  D  ++N L
Sbjct: 118 AFASFDTEPLASASIAQVHAATL---ADGRQ-----VVVKVLRPGIEKQIDADIALLNSL 169

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +    P    +R  E V +    + +++DL RE A+ S     +    D+  P+ ++
Sbjct: 170 AALVERTHPRADKIRPREVVAEVENTLAAELDLQREGANASVLRRFWENSDDLYVPEVIW 229

Query: 402 PLVHPAVLVETYEQGECV-SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
              H A    T E+   + S  +  L      + ALA  G       +  DNF HAD H 
Sbjct: 230 S--HTAERALTLERVWGIPSDDIAALDKAGIDRKALAAKGVRVFYTQVFRDNFFHADAHA 287

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V     +       R+ P  I LD G+  +LS+ D+  L E F A+  RD R  AE
Sbjct: 288 GNIWVDTDPSR-------RANPRFIALDFGIMGQLSQEDQYYLAENFMAIFNRDYRRIAE 340

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             ++   +       + +A +  V E +    T     +  AE + +L    +R+++ + 
Sbjct: 341 LHVQARWMPDNVRIDDLEAAVRSVCEPYF---TRPLSQISLAEVLMKLFRVAQRYQLTLQ 397

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +  +  T L +EG  R+LDP  ++    + +L K
Sbjct: 398 PQLILLQKTLLNIEGVGRQLDPQIDIWAVAKPVLAK 433


>gi|330807086|ref|YP_004351548.1| ubiquinone biosynthesis protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|423694917|ref|ZP_17669407.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas fluorescens Q8r1-96]
 gi|327375194|gb|AEA66544.1| Putative ubiquinone biosynthesis protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|388009700|gb|EIK70951.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas fluorescens Q8r1-96]
          Length = 534

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 177/393 (45%), Gaps = 25/393 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L  L  + P      +   IE   G+++SE
Sbjct: 62  ALQDLGPIFIKFGQILSTRRDLLPEDIADELMRLQDRVPPFDSKVSVALIEEQLGKKISE 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + 
Sbjct: 122 VFSRFDVEPLASASVAQVHAAQLK---SGEE-----VVVKVIRPGLKPIIAQDLAWLFIL 173

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ +  + A  + L   + VQ +   +  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 174 ARAAERLSADARLLHPVDVVQDYEKTIYDELDLLREAANASQLRRNFEGSPLLYVPQVYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  V+           +K  LA  G       +  D+F HADMHPG
Sbjct: 234 DWCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V   Q  S         P  I +D G+   L+  D+  L     A  +RD R  A+ 
Sbjct: 293 NIFVSTVQPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQL 343

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V  
Sbjct: 344 HIDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQP 400

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 401 QLVLLQKTLLNIEGLGRQLYPELDLWNTAQPFL 433


>gi|398889814|ref|ZP_10643593.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM55]
 gi|398189262|gb|EJM76545.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM55]
          Length = 534

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 177/388 (45%), Gaps = 25/388 (6%)

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGF 287
           GP FIK+GQ  +TR DL P D+  +L +L  + P      + K IE   G+++S++F  F
Sbjct: 67  GPIFIKFGQILSTRRDLLPEDIADELMKLQDRVPPFDSQVSVKLIEEQLGKKISDVFSRF 126

Query: 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISS 347
           +  P+AS S+AQVH A L+    G++     V VKV  PG+   I++D   + + A+ + 
Sbjct: 127 DVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPVIKQDLAWLFILARAAE 178

Query: 348 VIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHP 406
            + A  + L   + V  +   +  ++DL REAA+ S+   NF     +  P+  +    P
Sbjct: 179 KVSADARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFDGSPLLYVPQVYWDWCRP 238

Query: 407 AVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVR 466
            VLV     G  V+           +K  LA  G       +  D+F HADMHPGNI V 
Sbjct: 239 KVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPGNIFVS 297

Query: 467 VAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR-- 524
             Q  S         P  I +D G+   L+  D+  L     A  +RD R  A+  +   
Sbjct: 298 TVQPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLHIDSG 348

Query: 525 -LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTV 583
            +  +      +A I  V E    +  P  D+    + + +L +  RR  + V   +  +
Sbjct: 349 WVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQPQLVLL 405

Query: 584 MVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             T L +EG  R+L P  ++ +T Q  L
Sbjct: 406 QKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|408825318|ref|ZP_11210208.1| ubiquinone biosynthesis protein UbiB [Pseudomonas geniculata N1]
          Length = 551

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 184/396 (46%), Gaps = 25/396 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP F+K+GQ  +TR DL P D+  +L+ L  +         ++ +E A G  +SE
Sbjct: 58  ALQDLGPIFVKFGQILSTRRDLVPPDVANELTLLQDRVKPFDGETARRIVEEALGLPVSE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
            F  F+  P+AS SIAQVH A+L     G++     V VKV  PG+ + I  D  ++N L
Sbjct: 118 AFASFDTEPLASASIAQVHAATL---ADGRQ-----VVVKVLRPGIEKQIDADIALLNSL 169

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +    P    +R  E V +    + +++DL RE A+ S     +    D+  P+ ++
Sbjct: 170 AALVERTHPRADKIRPREVVAEVENTLSAELDLQREGANASVLRRFWENSDDLYVPEVIW 229

Query: 402 PLVHPAVLVETYEQGECV-SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
              H A    T E+   + S  +  L      + ALA  G       +  DNF HAD H 
Sbjct: 230 S--HTAERALTLERVWGIPSDDIAALDKAGIDRKALAAKGVRVFYTQVFRDNFFHADAHA 287

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V     +       R+ P  I LD G+  +LS+ D+  L E F A+  RD R  AE
Sbjct: 288 GNIWVDTDPSR-------RANPRFIALDFGIMGQLSQEDQYYLAENFMAIFNRDYRRIAE 340

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             ++   +       + +A +  V E +    T     +  AE + +L    +R+++ + 
Sbjct: 341 LHVQARWMPDNVRIDDLEAAVRSVCEPYF---TRPLSQISLAEVLMKLFRVAQRYQLTLQ 397

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +  +  T L +EG  R+LDP  ++    + +L K
Sbjct: 398 PQLILLQKTLLNIEGVGRQLDPQIDIWAVAKPVLAK 433


>gi|386716640|ref|YP_006182966.1| Ubiquinone biosynthesis monooxygenase UbiB [Stenotrophomonas
           maltophilia D457]
 gi|384076202|emb|CCH10783.1| Ubiquinone biosynthesis monooxygenase UbiB [Stenotrophomonas
           maltophilia D457]
          Length = 551

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 184/396 (46%), Gaps = 25/396 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP F+K+GQ  +TR DL P D+  +L+ L  +         ++ +E A G  +SE
Sbjct: 58  ALQDLGPIFVKFGQILSTRRDLVPPDVANELTLLQDRVKPFDGDTARRIVEEALGLPVSE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
            F  F+  P+AS SIAQVH A+L     G++     V VKV  PG+ + I  D  ++N L
Sbjct: 118 AFASFDTEPLASASIAQVHAATL---ADGRQ-----VVVKVLRPGIEKQIDADIALLNSL 169

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +    P    +R  E V +    + +++DL RE A+ S     +    D+  P+ ++
Sbjct: 170 AALVERTHPRADKIRPREVVAEVENTLAAELDLQREGANASVLRRFWENSDDLYVPEVIW 229

Query: 402 PLVHPAVLVETYEQGECV-SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
              H A    T E+   + S  +  L      + ALA  G       +  DNF HAD H 
Sbjct: 230 S--HTAERALTLERVWGIPSDDIAALDKAGIDRKALAAKGVRVFYTQVFRDNFFHADAHA 287

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V     +       R+ P  I LD G+  +LS+ D+  L E F A+  RD R  AE
Sbjct: 288 GNIWVDTDPSR-------RANPRFIALDFGIMGQLSQEDQYYLAENFMAIFNRDYRRIAE 340

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             ++   +       + +A +  V E +    T     +  AE + +L    +R+++ + 
Sbjct: 341 LHVQARWMPDNVRIDDLEAAVRSVCEPYF---TRPLSQISLAEVLMKLFRVAQRYQLTLQ 397

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +  +  T L +EG  R+LDP  ++    + +L K
Sbjct: 398 PQLILLQKTLLNIEGVGRQLDPQIDIWAVAKPVLAK 433


>gi|218439217|ref|YP_002377546.1| ABC transporter [Cyanothece sp. PCC 7424]
 gi|218171945|gb|ACK70678.1| ABC-1 domain protein [Cyanothece sp. PCC 7424]
          Length = 560

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 178/396 (44%), Gaps = 33/396 (8%)

Query: 213 RELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTI 272
           R  WL   +R L   GP FIK GQ  +TR DL P +  ++ S+L  + P  S      TI
Sbjct: 55  RAKWL---VRQLLKLGPTFIKIGQSLSTRADLLPIEYVQEFSQLQDRVPGFSAEIAILTI 111

Query: 273 ERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESI 332
           E   G+ ++++F+ FE +P+AS S+ QVHRA L   + G++     V VKV+ PG+ +  
Sbjct: 112 ETELGKPITDLFEQFESSPLASASLGQVHRAKL---FTGEE-----VVVKVQRPGLQKLF 163

Query: 333 RRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWK 392
             DF +++   + ++  P+ +  RL+   Q+F   +  ++D   E  +  RF  NF+ + 
Sbjct: 164 NLDFEVVHQLLRFANWFPSFRKYRLEAIYQEFFGLLFQEIDYINEGKNAERFRENFQDYP 223

Query: 393 DVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDN 452
            +  P   +      +L   Y  G  V      L+ +      +  +G  + LK LL+D 
Sbjct: 224 QIKAPIVYWEYTTRKILTLEYLPGIKVDDRT-ALEANGVNLDEVIKLGICSYLKQLLLDG 282

Query: 453 FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR 512
           F  +D HPGN+ V +                +IF D G  AE+    +  +++ F AV +
Sbjct: 283 FFQSDPHPGNMAVNL-------------NGDLIFYDFGTMAEVKPVAKDQMIKTFFAVLK 329

Query: 513 RDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKV--- 569
           +D     E  + +        P + +  V     F      D        +Q+ E+V   
Sbjct: 330 KDTDEVVETLVYMG----LIEPISDLSSVRRIVRFLLDNFRDKPVDIRAFEQISEEVYLM 385

Query: 570 -RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
            ++    +   +  ++ +   L+G  R LDP YN++
Sbjct: 386 FKQQPFRLPAQMTFIIKSLTTLDGIARALDPQYNLL 421


>gi|15615271|ref|NP_243574.1| ABC transporter [Bacillus halodurans C-125]
 gi|10175329|dbj|BAB06427.1| ABC transporter [Bacillus halodurans C-125]
          Length = 526

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 173/384 (45%), Gaps = 27/384 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ A+TRPDL P +L ++L +L  +    S+   K  +E   G  + E+
Sbjct: 31  LEELGPTFVKMGQMASTRPDLIPSELMEELEKLQDRVSPFSYEEVKAIVEHELGMAVDEL 90

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F E P+ + SI QVH A L+   P        VAVKV+ P + E I+ D  I+   A
Sbjct: 91  FREFHETPLGAASIGQVHFAVLQSGEP--------VAVKVQRPNIEEIIKTDLEILQHLA 142

Query: 344 KISSVIPAVKW---LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           +I+     ++W    +L E +++F+  +++++D   E  +  R    F     V  P+  
Sbjct: 143 EIAE--HRLEWAANYQLVEIIEEFSKALLAELDYTVEGRNADRLAKLFEDDPTVQIPQVY 200

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +      VL   Y +G  ++   +EL+     +  LA   THA+LK +L++ F H D HP
Sbjct: 201 WDYSTKKVLTMEYVEGTKLNER-EELKQRGYDEKMLAQRITHAILKQILLEGFFHGDPHP 259

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI    ++              + F+D GM   LS   + +      A+ RR       
Sbjct: 260 GNISALPSEA-------------IAFMDFGMVGRLSPQMKQHFASLVIAIMRRRSEGVLN 306

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
              ++    +  + +    ++DE    +       V   E +  L     RHR+ +  ++
Sbjct: 307 AITKMGIVPDDVDMQLLQWDIDELREKFDDVPLSQVSLGEAVNDLFAIANRHRIQIPADL 366

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVM 604
             +  T L +E    KLDP  +++
Sbjct: 367 TLLGKTLLTMEQMVEKLDPELSIV 390


>gi|326390125|ref|ZP_08211686.1| serine/threonine protein kinase [Thermoanaerobacter ethanolicus JW
           200]
 gi|325993773|gb|EGD52204.1| serine/threonine protein kinase [Thermoanaerobacter ethanolicus JW
           200]
          Length = 555

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 185/404 (45%), Gaps = 27/404 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           +TLE  GP FIK GQ  +TR DL P ++  +L++L        F   K  +E     ++S
Sbjct: 60  KTLEELGPTFIKMGQLLSTRGDLIPHNILLELAKLQDDVEPEDFVAIKNILESELKGKIS 119

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           + F  F+E P+AS SI QV+RA ++    G+      V VKV+ P V + I  D +I+  
Sbjct: 120 DFFIYFDETPIASASIGQVYRAKIK---EGKD-----VVVKVQRPEVSQKINADIIILKN 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
            AKI +       L   E V + A  +++++D  +E  +  RF  NF +   +  PK  +
Sbjct: 172 IAKILNERIVDAPLDFVEIVDELAESLLNELDYTQEGNNAERFRENFEKESYIYIPKVYW 231

Query: 402 PLVHPAVLVETYEQGECV-SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                 VL   Y +G  V +R +   +G +  K  +A  G  A+   +      H D HP
Sbjct: 232 EYTTKRVLTMEYVEGISVKNRDLLVKKGFDLKK--IAREGAWAIFLQVYEFGLFHGDPHP 289

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNIL+    K S             ++D G+   L K+ R  +++ FKA A  D     E
Sbjct: 290 GNILITNDGKIS-------------YIDFGIVGYLDKSSREMIIDLFKAFAENDIEEVIE 336

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
               +   +   N +    ++      F+ TP  + +   + M++++  V +H++ +   
Sbjct: 337 VLSDVGAIRPDTNLRTLKSDLSHIINYFYNTPLKN-ISVNDSMRKIMSTVYKHKLILPPE 395

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYT 623
              ++ +   +EG  R LDP +++    +   +K  + +++S T
Sbjct: 396 FTLLLKSLATVEGVGRSLDPDFSISSVAKD-FIKQVYLRNISLT 438


>gi|410479777|ref|YP_006767414.1| protein kinase [Leptospirillum ferriphilum ML-04]
 gi|124516760|gb|EAY58268.1| ABC1 family transporter [Leptospirillum rubarum]
 gi|406775029|gb|AFS54454.1| putative unusual protein kinase [Leptospirillum ferriphilum ML-04]
          Length = 557

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 175/393 (44%), Gaps = 43/393 (10%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GPA IK GQ  ++R DLFP +   +  +L    P        K +E A  + +  +
Sbjct: 65  LEELGPAAIKLGQILSSRADLFPPEFLAEFQKLQDSLPPIPPETLDKAVEDALKKPIDSV 124

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-LA 342
           F  F+  PVA  SI+QVHRA L   + G+      VAVKVR PG+ +S+  D  I+  L+
Sbjct: 125 FSEFDRHPVAQASISQVHRARL---HSGE-----TVAVKVRRPGILDSVEPDLRILGFLS 176

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +   I  +K  R     +Q+   +  ++D   EA ++ R   NFR    V  PK    
Sbjct: 177 DLVERNIEDMKVFRPRALARQYIRTLRKELDFTHEARNMERARKNFRNEPSVVIPKLYSE 236

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA---LAHIGTHALLKMLLVDNFIHADMH 459
               AVLV  Y +G  +     E++  E+L +    +AH+G  ++L  + V  F   D H
Sbjct: 237 WSSEAVLVMEYLEGVSIR----EIRSFEKLGATPPEVAHLGARSILLQVFVHGFFQGDPH 292

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGN+LV    +             +  LD GM   LS   R  L +   ++  RD     
Sbjct: 293 PGNVLVLPGHR-------------IGILDFGMFGSLSPDRRDLLGDLLVSLVERDIPFMI 339

Query: 520 ECTLRL-------SKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRH 572
               RL        ++    +  AF+EE      F   P  + +       +L E VR H
Sbjct: 340 RTLERLRALPEDFREEDLASDISAFLEE------FTNRPLQE-IRLDHMSAELFELVRTH 392

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
           R+ +  ++  +    +++EG  R LDP +N+++
Sbjct: 393 RLTLPPDLSLLFRALVIMEGIGRTLDPTFNMIE 425


>gi|194363953|ref|YP_002026563.1| putative ubiquinone biosynthesis protein UbiB [Stenotrophomonas
           maltophilia R551-3]
 gi|194346757|gb|ACF49880.1| 2-polyprenylphenol 6-hydroxylase [Stenotrophomonas maltophilia
           R551-3]
          Length = 551

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 184/396 (46%), Gaps = 25/396 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP F+K+GQ  +TR DL P D+  +L+ L  +         ++ +E A G  +SE
Sbjct: 58  ALQDLGPIFVKFGQILSTRRDLVPPDVANELTLLQDRVKPFDGETARRIVEEALGLPVSE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
            F  F+  P+AS SIAQVH A+L     G++     V VKV  PG+ + I  D  ++N L
Sbjct: 118 AFASFDTEPLASASIAQVHAATL---ADGRQ-----VVVKVLRPGIEKQIDADIALLNSL 169

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +    P    +R  E V +    + +++DL RE A+ S     +    D+  P+ ++
Sbjct: 170 AALVERTHPRADKIRPREVVAEVENTLAAELDLQREGANASVLRRFWENSDDLYVPEVIW 229

Query: 402 PLVHPAVLVETYEQGECV-SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
              H A    T E+   + S  +  L      + ALA  G       +  DNF HAD H 
Sbjct: 230 S--HTAERALTLERVWGIPSDDIAALDKAGIDRKALAAKGVRVFYTQVFRDNFFHADAHA 287

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V     +       R+ P  I LD G+  +LS+ D+  L E F A+  RD R  AE
Sbjct: 288 GNIWVDTDPAR-------RANPRFIALDFGIMGQLSQEDQYYLAENFMAIFNRDYRRIAE 340

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             ++   +       + +A +  V E +    T     +  AE + +L    +R+++ + 
Sbjct: 341 LHVQARWMPDNVRIDDLEAAVRSVCEPYF---TRPLSQISLAEVLMKLFRVAQRYQLTLQ 397

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +  +  T L +EG  R+LDP  ++    + +L K
Sbjct: 398 PQLILLQKTLLNIEGVGRQLDPQIDIWAVAKPVLAK 433


>gi|126179786|ref|YP_001047751.1| hypothetical protein Memar_1843 [Methanoculleus marisnigri JR1]
 gi|125862580|gb|ABN57769.1| 2-octaprenylphenol hydroxylase [Methanoculleus marisnigri JR1]
          Length = 549

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 186/399 (46%), Gaps = 24/399 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           +E  GP +IK+GQ  +TR +L P DL ++L +L  +     F   +  I   +   L E 
Sbjct: 55  IEELGPTYIKFGQIMSTRRELLPPDLIEELQKLQDRVAPVPFEEIRPVI-MEYCPNLEEC 113

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           FD  EE PVA+ S++QVHRA  R  +        VVA+KV+ PG+ + I  D +I+ +L 
Sbjct: 114 FDIIEEEPVAAASLSQVHRAVTRDGH--------VVALKVQRPGIVDLIETDLLILQSLV 165

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
            ++ S+ P ++   L   + +F+  +  ++D  ++ A+  R   N +  + V  P+  + 
Sbjct: 166 TRVESIFPDMRVYNLQGMMDEFSAQIRRELDFTQDGANAERLRRNLQDLECVKIPRVYWE 225

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
           +  P +L   Y +G  +   V+ ++        +A  G  A ++ + VD F H D HPGN
Sbjct: 226 ISGPRLLAMDYVEGVRIDD-VEAIRALGLFPEDIADTGFAAYVQQIFVDGFFHGDPHPGN 284

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           +LV                  ++FLD G+   L    R   V+F  A+ R+D        
Sbjct: 285 LLV-------------TELGEIVFLDYGIVGVLRLERRRVFVDFLLAMTRKDVAGVIAAL 331

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCT 582
            +L    N  +  A  +++      +   + + V+ A  ++ L + +RR+ + V   +  
Sbjct: 332 GKLDVHINPADLDAVKDDLYLVMLDYREMKLERVNFAVAIRGLTDTLRRYHIRVPSTLML 391

Query: 583 VMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLS 621
           +M   +++     +LDP +N    ++  LL+    + LS
Sbjct: 392 MMKVIVMVMDVGTRLDPAFNFDQRVRPYLLEIAAQQRLS 430


>gi|332142942|ref|YP_004428680.1| protein kinase [Alteromonas macleodii str. 'Deep ecotype']
 gi|332143013|ref|YP_004428751.1| protein kinase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552964|gb|AEA99682.1| predicted protein kinase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327553035|gb|AEA99753.1| predicted protein kinase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 542

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 178/401 (44%), Gaps = 27/401 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSE 282
           L+  GP FIK+GQ  +TR DL P  +  +L+ L  K P  S    +  I +A G + L+E
Sbjct: 58  LQNLGPVFIKFGQMLSTRRDLLPPAIANELARLQDKVPPFSSDAAQDIIRQALGLKDLNE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
           +F  FE +P+AS SIAQVH A L+            V VKV  P + ++I  D  ++ +L
Sbjct: 118 LFSEFETSPLASASIAQVHAAKLKHNNED-------VVVKVLRPDIRDTIVADMELLFSL 170

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +   +P  K LR  E V ++   ++ ++DL RE+A+  +   NF     +  PK   
Sbjct: 171 ANVLQRWLPDGKRLRPVEVVVEYRKTIVDELDLLRESANGIQLGRNFEGSDALYVPKIYS 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VLV     G  +S  +D L         LA  G       +  D+F HADMHPG
Sbjct: 231 DYCRSNVLVMERIYGLPISN-IDALLTQNTNMKKLAERGVEVFFTQVFRDSFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V     ++         P  I +D G+   L++ D+  L E F A   RD R  A+ 
Sbjct: 290 NIFVSTEHPEN---------PKYIAIDFGIVGTLNREDKRYLAENFIAFFNRDYRKVAQL 340

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
                 + +  N    +  I  V E    +  P  ++      + QL    RR  + V  
Sbjct: 341 HADSGWVPQDTNIDEFEMAIRTVCE--PIFQKPLAEISF-GNVLLQLFNTARRFNMVVQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
            +  +  T L +EG  R+L P  ++  T +  L   +W K 
Sbjct: 398 QLVLLQKTLLYIEGLGRQLYPQLDLWKTAKPFL--ENWMKE 436


>gi|398857613|ref|ZP_10613312.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM79]
 gi|398240894|gb|EJN26562.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM79]
          Length = 534

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 178/393 (45%), Gaps = 25/393 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L +L  + P      + + IE   G+++SE
Sbjct: 62  ALQDLGPIFIKFGQILSTRRDLLPEDIADELMKLQDRVPPFDSQVSVRLIEEQLGKKISE 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + 
Sbjct: 122 VFSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPIIAQDLAWLFIL 173

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ +  + A  + L   + V  +   +  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 174 ARAAEKLSADARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFDGSPLLYVPQVYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  V+           +K  LA  G       +  D+F HADMHPG
Sbjct: 234 DWCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V   Q  S         P  I +D G+   L+  D+  L     A  +RD R  A+ 
Sbjct: 293 NIFVSTVQPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQL 343

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V  
Sbjct: 344 HIDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQP 400

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 401 QLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|398939107|ref|ZP_10668326.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM41(2012)]
 gi|398164743|gb|EJM52873.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM41(2012)]
          Length = 534

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 178/393 (45%), Gaps = 25/393 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L +L  + P      +   IE   G+++SE
Sbjct: 62  ALQDLGPIFIKFGQILSTRRDLLPEDIADELMKLQDRVPPFDSQVSVNLIEEQLGKKISE 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + 
Sbjct: 122 VFSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPIIAQDLAWLFIL 173

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ +  + A  + L   + VQ +   +  ++DL REAA+ S+   NF   + +  P+  +
Sbjct: 174 ARAAEKLSADARLLHPVDVVQDYEKTIYDELDLLREAANASQLRRNFDGSELLYVPQVYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  V+           +K  LA  G       +  D+F HADMHPG
Sbjct: 234 NWCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V      S         P  I +D G+   L+  D+  L     A  +RD R  A+ 
Sbjct: 293 NIFVSTVNPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQL 343

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V  
Sbjct: 344 HIDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQP 400

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 401 QLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|407366947|ref|ZP_11113479.1| ubiquinone biosynthesis protein [Pseudomonas mandelii JR-1]
          Length = 534

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 177/393 (45%), Gaps = 25/393 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L +L  + P      +   IE   G+++SE
Sbjct: 62  ALQDLGPIFIKFGQILSTRRDLLPEDIADELMKLQDRVPPFDSQVSVNLIEEQLGKKISE 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + 
Sbjct: 122 VFSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPIIAQDLAWLFIL 173

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ +  + A  + L   + VQ +   +  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 174 ARAAEKLSADARLLHPVDVVQDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  V+           +K  LA  G       +  D+F HADMHPG
Sbjct: 234 DWCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V      S         P  I +D G+   L+  D+  L     A  +RD R  A+ 
Sbjct: 293 NIFVSTVNPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQL 343

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V  
Sbjct: 344 HIDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQP 400

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 401 QLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|390568483|ref|ZP_10248789.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia terrae
           BS001]
 gi|420252564|ref|ZP_14755669.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia sp. BT03]
 gi|389939649|gb|EIN01472.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia terrae
           BS001]
 gi|398054289|gb|EJL46417.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia sp. BT03]
          Length = 527

 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 179/394 (45%), Gaps = 25/394 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL   D+  +L++L  + P    A     IE++ G  +  I
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLRPDIASELAKLQDQVPPFDSAVAIAIIEKSLGAPVDTI 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRF-RYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           FD FE  PVAS SIAQVH A+L+  ++ G++     VAVKV  P +   I  D  ++ ++
Sbjct: 116 FDDFERVPVASASIAQVHFATLKTGQHAGKQ-----VAVKVLRPNMLPVIDSDLALLRDI 170

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A     +    K L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 171 AVWAERLWADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMYW 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VLV     G  +S+ VD L+        LA  G       +  D F HADMHPG
Sbjct: 231 EYCTANVLVMERMVGVPISQ-VDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V +      +          I LD G+   LS  D+  L + F A  +RD    A  
Sbjct: 290 NIQVSLDPVHFGR---------YIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVATL 340

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVD 577
            L    +     P   +EE++ A      P  D     +   + + +L    RR  V + 
Sbjct: 341 HL----ESGWVPPTTRVEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQ 396

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 397 PQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|171321550|ref|ZP_02910486.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia ambifaria MEX-5]
 gi|171093165|gb|EDT38377.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia ambifaria MEX-5]
          Length = 525

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 176/393 (44%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL   D   +L++L  + P    A     IE++ G  + E+
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLSVDFANELAKLQDQVPPFDSAVAIAIIEKSLGAPVDEL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           FD FE  P+AS SIAQVH A L+      K     VAVKV  P +   I  D  ++ ++A
Sbjct: 116 FDEFEREPIASASIAQVHFAKLKQGVHAGK----AVAVKVLRPNMLPVIDSDLALMRDIA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 172 TWTERMWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWD 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VLV     G  +S+ V+ L+        LA  G       +  D F HADMHPGN
Sbjct: 232 FSTSQVLVMERMTGVPISQ-VETLRTAGVDIKKLAREGVEIFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +  K   +          + LD G+   LS  D+  L + F A  +RD    A   
Sbjct: 291 IQVSLDPKTFGR---------YVALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLH 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
           L    +     P+  +EE++ A      P  D     +   + + +L    RR  V +  
Sbjct: 342 L----ESGWVPPETRVEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 398 QLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|420236507|ref|ZP_14740990.1| ABC1 family protein kinase [Parascardovia denticolens IPLA 20019]
 gi|391880334|gb|EIT88828.1| ABC1 family protein kinase [Parascardovia denticolens IPLA 20019]
          Length = 561

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 189/418 (45%), Gaps = 58/418 (13%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + +E  GP F+K GQ  + R ++ P D C +L++L S A    FA  ++ + R + + +S
Sbjct: 58  KAMEELGPTFVKVGQILSMRSEILPEDYCSELAKLKSDADPMPFALVEQVLSREYSKPVS 117

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-- 339
           ++F      P+ S S+AQVHRA+L     G+      VA+KV+ PGV E++ +D  II  
Sbjct: 118 QVFSSINPKPLGSASLAQVHRATL---VTGED-----VAIKVQRPGVRETMAQDIEIIRS 169

Query: 340 --NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFP 397
             N A K++S     + +     V +      S+ D   EA +L  F      +  +  P
Sbjct: 170 VANTATKVAS--ENTQIVDFMGVVNELWETFQSETDFMIEAKNLQEFKAFADGFAYMDCP 227

Query: 398 KPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSA---LAHIGTHALLKMLLVDN-- 452
           +P   L    VLV  Y  G  +S+        +RL+     L  IGT       LVDN  
Sbjct: 228 RPYLDLCTQHVLVMDYIDGIAISQ-------TKRLQEEGYDLTEIGTK------LVDNYA 274

Query: 453 -------FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE 505
                  F HAD H GNI++R  +              ++ +D+GM   ++   R  L +
Sbjct: 275 TQVLDAGFFHADPHSGNIIIRGGR--------------IVLIDLGMVGRINGEMRSILKQ 320

Query: 506 FFKAVARRDGRTAAECTLRL----SKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAEC 561
              AV ++D  T  E  LRL    S  QN  +    + ++D   A +G  + D +  A+ 
Sbjct: 321 MIFAVPQKDSVTLQEGLLRLADISSTGQNI-DRATLLADIDLIIADYGDVDLDELDIAKF 379

Query: 562 MQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           +  ++    R+ + + G + TV  + + LEG    L P  N+++ +   +L +   K 
Sbjct: 380 IMSMIRLASRNNLKLPGTITTVARSLVTLEGLIDDLMPQANMIEIITQHVLTSRSVKG 437


>gi|292486702|ref|YP_003529572.1| ubiquinone biosynthesis protein ubiB [Erwinia amylovora CFBP1430]
 gi|292897936|ref|YP_003537305.1| ubiquinone biosynthesis protein [Erwinia amylovora ATCC 49946]
 gi|428783627|ref|ZP_19001122.1| putative ubiquinone biosynthesis protein ubiB [Erwinia amylovora
           ACW56400]
 gi|291197784|emb|CBJ44879.1| probable ubiquinone biosynthesis protein [Erwinia amylovora ATCC
           49946]
 gi|291552119|emb|CBA19156.1| probable ubiquinone biosynthesis protein ubiB [Erwinia amylovora
           CFBP1430]
 gi|312170766|emb|CBX79028.1| probable ubiquinone biosynthesis protein ubiB [Erwinia amylovora
           ATCC BAA-2158]
 gi|426277913|gb|EKV55636.1| putative ubiquinone biosynthesis protein ubiB [Erwinia amylovora
           ACW56400]
          Length = 545

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 177/400 (44%), Gaps = 26/400 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP +IK+GQ  +TR DLFP  +  +L+ L  K P    A   K IE++ G  +   
Sbjct: 61  LEQLGPVWIKFGQMMSTRRDLFPPHIADQLAMLQDKVPPFDGAQALKLIEQSLGASIDSQ 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           FD F+  P+AS SIAQVH A+L+    G++     V +KV  P +   I+ D  +I  LA
Sbjct: 121 FDNFDIVPLASASIAQVHTATLKEN--GRE-----VVIKVIRPDILPVIKADMKLIYRLA 173

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  ++P  + LR  E V  +   ++ +++L REAA+  +   NF + + +  P+    
Sbjct: 174 RWVPRLLPDGRRLRPQEVVADYEKTLLDELNLLREAANAIQLRRNFDQSRMLYVPEIYSD 233

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                +LV     G  +S     L+ H      LA  G       +  D+F HADMHPGN
Sbjct: 234 YCSENMLVMERIYGIPISDMA-TLEQHGVNMKLLAERGVQVFFTQVFRDSFFHADMHPGN 292

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V     +          P  I +D G+   L+K D+  L E F A   RD R  AE  
Sbjct: 293 IFVSYEHPED---------PQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELH 343

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +    N  + +  I  V E        E    H    +  L    RR  + V   
Sbjct: 344 VDSGWVPADTNVEDFEFAIRTVCEPIFEKPLAEISFGH---VLLNLFNTARRFNMEVQPQ 400

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           +  +  T L +EG  R+L P  ++  T +  L   +W K 
Sbjct: 401 LVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFL--ENWIKD 438


>gi|398998202|ref|ZP_10700981.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM21]
 gi|398120863|gb|EJM10507.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM21]
          Length = 534

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 177/392 (45%), Gaps = 25/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP FIK+GQ  +TR DL P D+  +L +L  + P      + K IE   G+++SE+
Sbjct: 63  LQDLGPIFIKFGQILSTRRDLLPEDIADELMKLQDRVPPFDSQVSVKLIEEQLGKKISEV 122

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + A
Sbjct: 123 FSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPIIAQDLAWLFILA 174

Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           + +  + A  + L   + V  +   +  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 175 RAAEKLSADARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYWD 234

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
              P VLV     G  V+           +K  LA  G       +  D+F HADMHPGN
Sbjct: 235 WCRPKVLVMERIYGIQVTDLTTLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPGN 293

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V      S         P  I +D G+   L+  D+  L     A  +RD R  A+  
Sbjct: 294 IFVSTVNPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLH 344

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V   
Sbjct: 345 IDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQPQ 401

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 402 LVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|379717589|ref|YP_005305925.1| Ubiquinone biosynthesis monooxygenase UbiB [Francisella tularensis
           subsp. tularensis TIGB03]
 gi|379726193|ref|YP_005318379.1| Ubiquinone biosynthesis monooxygenase UbiB [Francisella tularensis
           subsp. tularensis TI0902]
 gi|377827642|gb|AFB80890.1| Ubiquinone biosynthesis monooxygenase UbiB [Francisella tularensis
           subsp. tularensis TI0902]
 gi|377829266|gb|AFB79345.1| Ubiquinone biosynthesis monooxygenase UbiB [Francisella tularensis
           subsp. tularensis TIGB03]
          Length = 515

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 190/426 (44%), Gaps = 33/426 (7%)

Query: 200 MMAPFADSFGPQFRELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHS 258
           M+ PF   +  + R L   V +R  LE  GP FIK+GQ  + R DL P D+ K++S+L  
Sbjct: 1   MLNPFY--YSRRVRRLEHGVRIREALEKLGPIFIKFGQALSVRADLLPPDVIKEVSKLQD 58

Query: 259 KAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIV 318
             P        + IE+A  + ++EIF  FE +P+AS S+AQVH A L+            
Sbjct: 59  NVPLFDNKIAAEQIEKAAKKPINEIFKSFESSPLASASVAQVHAAILQ--------NDDK 110

Query: 319 VAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREA 378
           V VKV  PG+ + ++ D  ++   A + S +  ++  +  E V++       ++DL REA
Sbjct: 111 VVVKVLRPGIEKILKLDTSLMLFFATLLSKLKEIRRFKPVEIVKEINQSFFDELDLVREA 170

Query: 379 AHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS--RYVDELQGHERLKSAL 436
           ++ S+   NF        PK  +      V+V     G  VS    +D L    RL   L
Sbjct: 171 SNASQIRRNFEDSAIHYVPKIYWEYTSSTVMVMERVGGVRVSDIETLDALGVDRRL---L 227

Query: 437 AHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELS 496
           A  G       +  D F HADMHPGN+ + V+           + P  I +D G+   L+
Sbjct: 228 AQRGVEIFYSQVFDDCFFHADMHPGNMFIDVSNP---------ADPKYISIDFGIVGTLN 278

Query: 497 KTDRVNLVEFFKAVARRDGRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEG 553
           + D+  L   F A  +RD R  AE  +    +         ++ I  V E        E 
Sbjct: 279 RDDQRYLAGNFLAFFKRDYRKVAELHIESGWVPSDTRVDVLESAIRTVCEPIFEKPMKEI 338

Query: 554 DLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            L +    + QL    RR  +N+   +  +  T   +EG  +KL P  N+ +T + +L K
Sbjct: 339 SLGY---TLMQLFAVARRFNMNIQPQLTLLQKTLFHVEGLGQKLCPELNIWETSRPILEK 395

Query: 614 ADWAKS 619
             W K 
Sbjct: 396 --WMKE 399


>gi|354613023|ref|ZP_09030958.1| ABC-1 domain-containing protein [Saccharomonospora paurometabolica
           YIM 90007]
 gi|353222611|gb|EHB86913.1| ABC-1 domain-containing protein [Saccharomonospora paurometabolica
           YIM 90007]
          Length = 441

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 175/395 (44%), Gaps = 34/395 (8%)

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGF 287
           GP F+K GQ  ATR D+ P +LC +L+ LH   P      T   +  A+G  L  +F   
Sbjct: 66  GPTFVKAGQVLATRRDVLPAELCDELAALHDDVPAIPSTDTTGALREAYGDDLDTLFADI 125

Query: 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISS 347
           E  PVA+GSIA VHRA        +  +   VA+K+R PG+   + RD  +I   A +++
Sbjct: 126 ERTPVAAGSIAGVHRA--------RDTEGRTVALKIRRPGIARLMDRDLRLIRRGAALAA 177

Query: 348 VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPA 407
            +PA   L + E V      +  QVD   EA  L R   N      V  P     L    
Sbjct: 178 RLPAFAGLPVTEIVGNMCDAVAGQVDFRAEADALERMRRNLSGVARVWVPAVRRDLCRDT 237

Query: 408 VLVETYEQG-ECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVR 466
           VL   + +G +  +  V  +   +  +SAL  I      +ML VD F+H D+HPGN+   
Sbjct: 238 VLAMEFIEGLDGSAHTVAPVLRKKFAESALISI-----YRMLFVDGFVHCDLHPGNL--- 289

Query: 467 VAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLS 526
                      F     V+ LD G + +LS   R    EFF  +A   GR  AE  +  +
Sbjct: 290 ----------NFTRSGQVVVLDAGFSIQLSDRLRRLFAEFFLNMAVGRGRRCAEIVVESA 339

Query: 527 KQ-QNCPNPKAFIEEV-DEAFAFWGTP--EGDLVHPAECMQQLLEKVRRHRVNVDGNVCT 582
                  + + F++ + D      G P  E  LV  A    ++ E  R H V+    +  
Sbjct: 340 AGVGRDADVEGFLDRMTDLVRRNHGLPAREFSLVGFA---TEMFELQRAHGVHAAPELIF 396

Query: 583 VMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWA 617
            +++ LV+EG  R+L P  +  +T + ++ +  W 
Sbjct: 397 PLLSLLVIEGAIRELHPDIDFQETAKPVINRGLWG 431


>gi|254522375|ref|ZP_05134430.1| 2-polyprenylphenol 6-hydroxylase [Stenotrophomonas sp. SKA14]
 gi|219719966|gb|EED38491.1| 2-polyprenylphenol 6-hydroxylase [Stenotrophomonas sp. SKA14]
          Length = 551

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 184/396 (46%), Gaps = 25/396 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP F+K+GQ  +TR DL P D+  +L+ L  +         ++ +E A G  +SE
Sbjct: 58  ALQDLGPIFVKFGQILSTRRDLVPPDVANELTLLQDRVKPFDGDTARRIVEEALGLPVSE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
            F  F+  P+AS SIAQVH A+L     G++     V VKV  PG+ + I  D  ++N L
Sbjct: 118 AFASFDTEPLASASIAQVHAATL---ADGRQ-----VVVKVLRPGIEKQIDADIALLNSL 169

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +    P    +R  E V +    + +++DL RE A+ S     +    D+  P+ ++
Sbjct: 170 AALVERTHPRADKIRPREVVAEVENTLAAELDLQREGANASVLRRFWENSDDLYVPEVIW 229

Query: 402 PLVHPAVLVETYEQGECV-SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
              H A    T E+   + S  +  L      + ALA  G       +  DNF HAD H 
Sbjct: 230 S--HTAERALTLERVWGIPSDDIAALDKAGIDRKALAAKGVRVFYTQVFRDNFFHADAHA 287

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V     +       R+ P  I LD G+  +LS+ D+  L E F A+  RD R  AE
Sbjct: 288 GNIWVDTDPAR-------RANPRFIALDFGIMGQLSQEDQYYLAENFMAIFNRDYRRIAE 340

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             ++   +       + +A +  V E +    T     +  AE + +L    +R+++ + 
Sbjct: 341 LHVQARWMPDHVRIDDLEAAVRSVCEPYF---TRPLSQISLAEVLMKLFRVAQRYQLTLQ 397

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +  +  T L +EG  R+LDP  ++    + +L K
Sbjct: 398 PQLILLQKTLLNIEGVGRQLDPQIDIWAVAKPVLAK 433


>gi|146329588|ref|YP_001209355.1| 2-polyprenylphenol 6-hydroxylase [Dichelobacter nodosus VCS1703A]
 gi|146233058|gb|ABQ14036.1| 2-polyprenylphenol 6-hydroxylase [Dichelobacter nodosus VCS1703A]
          Length = 526

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 188/406 (46%), Gaps = 29/406 (7%)

Query: 214 ELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTI 272
           +L L V LR +LE  GP F+K GQ  +TRPDL   D+  +LS+L  + P  S    +K I
Sbjct: 50  DLSLAVRLRLSLEKLGPIFVKLGQTLSTRPDLIAADISVELSKLQDQVPPFSGEIAQKVI 109

Query: 273 ERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESI 332
           E +    L  +F  F+   +AS S+AQVH A L   + G +     V VKV  P + + +
Sbjct: 110 ETSLKMPLEAVFAQFDPKALASASVAQVHAAVL---HDGSQ-----VVVKVLRPDIEDKV 161

Query: 333 RRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWK 392
           ++D  ++   A + ++    + LRL E V++F + M S++DL  EAA  S    NF    
Sbjct: 162 KQDIALMYFLAHLVNMSRQSRRLRLVEIVREFELSMRSELDLLNEAASASHVKANFADST 221

Query: 393 DVSFPKPVYPLVHPAVLVETYEQGECVSRYVDE--LQGHERLKSALAHIGTHALLKMLLV 450
            +  P+  +    P ++V+       +S   DE  +      K  LA  G       +  
Sbjct: 222 ILHVPQVYWQFCRPQMMVQERIFYVNIS---DEAAMNAAGVNKKVLAERGVEIFFTQVFR 278

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV 510
           D+F HADMHPGNI V ++  ++         P    +D G+   L+  D+  L E F A 
Sbjct: 279 DSFFHADMHPGNIFVDISDPEN---------PKYCAIDFGIMGSLTPEDQHYLAENFLAF 329

Query: 511 ARRDGRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLE 567
             RD R  A+  L    ++      + +A I +V E    +G    ++   A  +  L +
Sbjct: 330 FNRDYRRVAQLHLDSGWVAPDTRITDLEAAIRKVSE--PIFGKRIKEISFGA-FLFNLFQ 386

Query: 568 KVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
            VR   V +   +  +  T   +EG  R+L P  ++  T + +L K
Sbjct: 387 TVRHFDVKIQPQLVLLQKTLFNIEGLGRRLYPDLDLWTTAKPILEK 432


>gi|160872111|ref|ZP_02062243.1| 2-polyprenylphenol 6-hydroxylase [Rickettsiella grylli]
 gi|159120910|gb|EDP46248.1| 2-polyprenylphenol 6-hydroxylase [Rickettsiella grylli]
          Length = 550

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 176/392 (44%), Gaps = 25/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR D  P D+  +L++L  + P  S    K  ++    + L E+
Sbjct: 61  LEDLGPIFVKFGQTLSTRRDFIPLDIADELAKLQDRVPAFSGEQAKSMVQTHMKKPLCEV 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F   P+AS SIAQVH A L     GQ      V VKV  P + + I RD  ++ + A
Sbjct: 121 FSEFNIVPLASASIAQVHAAKL---ITGQD-----VVVKVLRPKIYKKISRDVDLLYVLA 172

Query: 344 KIS-SVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
            +S       K LR  E V +F   + +++DL RE A+ S+   NF     +  P+  +P
Sbjct: 173 SLSLRCFRPAKQLRPREIVAEFEACLKNELDLLREGANASQLRRNFLNSDLLYIPEVYWP 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VLV     G  +S  +  L+        LA  G       +  D+F HADMHPGN
Sbjct: 233 YTSHHVLVMERIYGISISD-LSALKKQGIHLKKLAERGVEIFFTQVFRDSFFHADMHPGN 291

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V   +K++         P  + +D G+   LS  D+  L E   A   RD R  A+  
Sbjct: 292 IFVSPKEKEN---------PQYLGVDFGIMGSLSSEDQRYLAENLVAFFNRDYRRVAQLH 342

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    ++K       +A I  V E    +G P  ++    + + +L +  R+  + V   
Sbjct: 343 VESGWVAKNTRINEFEAAIRTVCE--PIFGKPLKEISF-GQLLLRLFQTARQFNMEVQPQ 399

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T   +EG  R+L P  ++  T +  L
Sbjct: 400 LILLQKTLFNIEGLGRQLYPELDLWSTAKPFL 431


>gi|190572291|ref|YP_001970136.1| ubiquinone biosynthesis protein UbiB [Stenotrophomonas maltophilia
           K279a]
 gi|190010213|emb|CAQ43821.1| putative ubiquinone biosynthesis protein [Stenotrophomonas
           maltophilia K279a]
          Length = 551

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 184/396 (46%), Gaps = 25/396 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP F+K+GQ  +TR DL P D+  +L+ L  +         ++ +E A G  +SE
Sbjct: 58  ALQDLGPIFVKFGQILSTRRDLVPPDVANELTLLQDRVKPFDGETARRIVEDALGLPVSE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
            F  F+  P+AS SIAQVH A+L     G++     V VKV  PG+ + I  D  ++N L
Sbjct: 118 AFASFDTEPLASASIAQVHAATL---ADGRQ-----VVVKVLRPGIEKQIDADIALLNSL 169

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +    P    +R  E V +    + +++DL RE A+ S     +    D+  P+ ++
Sbjct: 170 AALVERTHPRADKIRPREVVAEVENTLAAELDLQREGANASVLRRFWENSDDLYVPEVIW 229

Query: 402 PLVHPAVLVETYEQGECV-SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
              H A    T E+   + S  +  L      + ALA  G       +  DNF HAD H 
Sbjct: 230 S--HTAERALTLERVWGIPSDDIAALDKAGIDRKALAAKGVRVFYTQVFRDNFFHADAHA 287

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V     +       R+ P  I LD G+  +LS+ D+  L E F A+  RD R  AE
Sbjct: 288 GNIWVDTDPAR-------RANPRFIALDFGIMGQLSQEDQYYLAENFMAIFNRDYRRIAE 340

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             ++   +       + +A +  V E +    T     +  AE + +L    +R+++ + 
Sbjct: 341 LHVQARWMPDHVRIDDLEAAVRSVCEPYF---TRPLSQISLAEVLMKLFRVAQRYQLTLQ 397

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +  +  T L +EG  R+LDP  ++    + +L K
Sbjct: 398 PQLILLQKTLLNIEGVGRQLDPQIDIWAVAKPVLAK 433


>gi|428218091|ref|YP_007102556.1| ABC-1 domain-containing protein [Pseudanabaena sp. PCC 7367]
 gi|427989873|gb|AFY70128.1| ABC-1 domain-containing protein [Pseudanabaena sp. PCC 7367]
          Length = 580

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 170/409 (41%), Gaps = 45/409 (11%)

Query: 213 RELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTI 272
           R +WL   L  L   GP FIK GQ  +TR D+ P +  ++LS+L  K P  S+   +K I
Sbjct: 64  RAIWLREALLQL---GPTFIKVGQLLSTRADILPSESVEELSKLQDKVPAFSYEKARKII 120

Query: 273 ERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESI 332
           E+  G+ + ++F  F+  P+A+ S+ QVH+ASL   + G++     V VKV+ PG+ +  
Sbjct: 121 EKELGKPIGKLFAYFDRVPMAAASLGQVHKASL---FSGEE-----VVVKVQRPGLLKLF 172

Query: 333 RRDFVIINLAAKISSVIPAV----KWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
             D  I+   A+     P       W+ + E  ++    +  + D   E  +   F  NF
Sbjct: 173 AIDLAILKKIAQYFQNHPKYGKNRDWVGIYEECRR---ILYEEADYLNEGRNADTFRRNF 229

Query: 389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKML 448
           R    +  P+  +      VL   Y  G  +S Y D L+     +S++A IG  + L+ L
Sbjct: 230 RHVGSIIVPRIYWRYASRRVLTLEYLPGIKISNY-DALEAANIDRSSIAKIGAQSYLEQL 288

Query: 449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFK 508
           L   F HAD HPGN+ V              S   +IF D GM  ++    R  L+  F 
Sbjct: 289 LNHGFFHADPHPGNLAV-------------TSSGQLIFYDFGMMGQIQSITRTKLMRTFF 335

Query: 509 AVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAF-AFWGTPEGD------------L 555
            VA++D        + L   +   +P      V      F G   G+             
Sbjct: 336 GVAKKDANEVVNSLVELGALKITGDPGPIRRSVQYMLDNFMGDQNGENSRNGSSTTTLES 395

Query: 556 VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
              AE    L +               VM     LEG  + LDP ++ M
Sbjct: 396 SSIAEISDDLYDIAYDQPFRFPATFTFVMRALSTLEGLGKGLDPNFDFM 444


>gi|350572126|ref|ZP_08940435.1| ubiquinone biosynthesis protein [Neisseria wadsworthii 9715]
 gi|349790714|gb|EGZ44617.1| ubiquinone biosynthesis protein [Neisseria wadsworthii 9715]
          Length = 550

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 175/383 (45%), Gaps = 26/383 (6%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  GP F+K GQ  +TR D+F  +  ++  +L +  P          IE   GR ++EIF
Sbjct: 65  EELGPTFVKLGQILSTRVDIFNAEWIEEFEQLQNNVPPIPTTNIHALIESHLGRPINEIF 124

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLAA 343
              +  P+ S SIAQVH+A L     G+      VA+K++ P + + I  D  ++ +LA 
Sbjct: 125 QSIDAVPIGSASIAQVHKAVL---LSGE-----TVAIKIKRPSIEKIINADLRILTHLAG 176

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            I S IP  +  R  + VQ FA  +  + DL+ E  ++ RF   F     V  PK    +
Sbjct: 177 LIESEIPETRRYRPLQMVQYFARSLAKETDLSVELRYMQRFENAFSDHSYVHIPKVYRDI 236

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
            +  +LV+ + QG+ +     +    E  ++ +A   T  L  M+L   F HAD HPGNI
Sbjct: 237 SNRQILVQEFIQGKLLLDTDLDSLPPET-RTLMAQRITDTLFTMILKQGFFHADPHPGNI 295

Query: 464 LVRVAQKKSSQKRLFRSKPHVI-FLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
                         F  K   I F+D G+   LS T R  ++E   A+ +RD + + +  
Sbjct: 296 --------------FLDKEGTISFIDFGLVGHLSATRRREIIELINALIQRD-QFSMQYV 340

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCT 582
           L    Q   P+      +V E    +       +  ++ +  + + +R H + + G++  
Sbjct: 341 LSNWAQGELPDENLLGADVLEMLLNYEHTAIRDLRISQVINDITQIMRGHELTLPGDLVM 400

Query: 583 VMVTTLVLEGWQRKLDPGYNVMD 605
           +  T + LEG  ++LD    +++
Sbjct: 401 LFKTLITLEGVVKRLDGSSELLE 423


>gi|256752805|ref|ZP_05493648.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256748309|gb|EEU61370.1| 2-polyprenylphenol 6-hydroxylase [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 558

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 173/386 (44%), Gaps = 27/386 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK GQ  +TR D+ P+++ K+L +L  K P  SF   K  I+  FG  L E 
Sbjct: 60  LEELGPTFIKMGQILSTRSDILPKNIIKELEKLQDKVPAFSFDEVKSVIQNEFGESLEEA 119

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           +  FE  P+A+ SIAQVH+A L   + G+      V VKV+ PG+ + I +D  I+   A
Sbjct: 120 YAEFEPTPLAAASIAQVHKALL---WSGK-----TVVVKVQRPGIEKIIAQDMRILEDIA 171

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           K + +     K     + V+ F   +  ++D   E  +  +F  NF + K V  P  ++ 
Sbjct: 172 KFVDNHTKYGKIYNFTKMVEDFKKRLEEELDFRIEGENAEKFKKNFLKDKKVKIPSIIWT 231

Query: 403 LVHPAVLVETYEQGECVSRY--VDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                VL   Y  G  ++ +  +DE  G +R   A+A     ++L  +L D F H D HP
Sbjct: 232 HTTRRVLTMEYIGGIPLNDFNAIDE-AGLDR--GAIARNLAKSVLNQILRDGFFHGDPHP 288

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI+V                  + FLD GM   LS   +    +    +  ++ R   E
Sbjct: 289 GNIMV-------------LEDGTIAFLDFGMVGSLSPERKRQFSKMLLGIVYKNSRMIIE 335

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
             + L+      N K   ++++     +     + +   E +  + + V  + + +    
Sbjct: 336 SIIDLNAVTLNVNMKKLEKDINNLRDRYVEIPLEKLKVGEVLNGIFDLVFSYNIVIPNEF 395

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDT 606
             +  + + LEG   KLDP  +V++ 
Sbjct: 396 NMLAKSLITLEGIVEKLDPKISVLEV 421


>gi|78067525|ref|YP_370294.1| ubiquinone biosynthesis protein UbiB [Burkholderia sp. 383]
 gi|77968270|gb|ABB09650.1| 2-octaprenylphenol hydroxylase [Burkholderia sp. 383]
          Length = 525

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 176/393 (44%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL   D   +L++L  + P    A     IE++ G  + E+
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLSVDFANELAKLQDQVPPFDSAVAIGIIEKSLGAPVDEL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           FD FE  P+AS SIAQVH A L+    GQ      VAVKV  P +   I  D  ++ ++A
Sbjct: 116 FDEFEREPIASASIAQVHFAKLK---QGQHAGK-AVAVKVLRPNMLSVIDSDLALMRDIA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 172 IWTERMWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWD 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VLV     G  +S+ V+ L+        LA  G       +  D F HADMHPGN
Sbjct: 232 FSTSQVLVMERMTGVPISQ-VETLRSAGVDIKKLAREGVEIFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +      +          + LD G+   LS  D+  L + F A  +RD    A   
Sbjct: 291 IQVSLDPNTFGR---------YVALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLH 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
           L    +     P+  +EE++ A      P  D     +   + + +L    RR  V +  
Sbjct: 342 L----ESGWVPPETRVEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 398 QLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|313669428|ref|YP_004049855.1| ABC-1 domain-containing protein [Sulfuricurvum kujiense DSM 16994]
 gi|313156625|gb|ADR35302.1| ABC-1 domain-containing protein [Sulfuricurvum kujiense DSM 16994]
          Length = 552

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 183/390 (46%), Gaps = 29/390 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           T+E  G  FIK  Q  +TRPDL P +L ++ S+L  +     F   K      FG+ + E
Sbjct: 59  TVEELGSTFIKMAQILSTRPDLIPVELAEEFSKLQDQVTPLPFDQIKVRFFEEFGKEVDE 118

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           IFDG E   +AS S+ QV+   L   Y G+K     VAVKV  P + ESIR D  ++   
Sbjct: 119 IFDG-ELTLIASASLGQVYTGCL---YTGEK-----VAVKVLKPNIEESIRLDLNVLRYF 169

Query: 343 AKI-SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A +  + + +      ++ V +F   ++ +++   EA +L+RF  NF+  + ++ PK   
Sbjct: 170 ANVLQNRLQSYGIQSPEKIVDEFEKAILKELNYEIEALNLNRFSGNFQGNEHIAVPKLYK 229

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VL   + +G  V+  ++ L+        +A  G +   + +    F HAD HPG
Sbjct: 230 EYSSKHVLTMEFIEGAKVTD-LETLRSTGNDPKDVAKKGFYLYCEQIFNHLFFHADPHPG 288

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V              S   ++F+D GM   +SK DR N +E    +  +    AA  
Sbjct: 289 NIFV-------------LSNGKIVFVDFGMMGNISKNDRKNFMEMIYYIVNKQEEKAAHY 335

Query: 522 TLRLSKQQNCP-NPKAFIEEVDEAFA--FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            L+LS+ +N   + KAF  ++ E     F+ + +   +     + + L  +R++ V    
Sbjct: 336 ILKLSRIENDHLDEKAFTRDMSEVIRTHFYASLQD--LKLKTFINETLALMRKYSVYFHE 393

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
           N   ++   + +EG  + LDP +N  +T++
Sbjct: 394 NNYLLVKGLITIEGIGKTLDPDFNAAETIR 423


>gi|89255818|ref|YP_513180.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           holarctica LVS]
 gi|115314308|ref|YP_763031.1| ubiquinone biosynthesis protein [Francisella tularensis subsp.
           holarctica OSU18]
 gi|254367179|ref|ZP_04983210.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           holarctica 257]
 gi|422938290|ref|YP_007011437.1| 2-octaprenylphenol hydroxylase [Francisella tularensis subsp.
           holarctica FSC200]
 gi|89143649|emb|CAJ78847.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           holarctica LVS]
 gi|115129207|gb|ABI82394.1| ubiquinone biosynthesis protein [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134253000|gb|EBA52094.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           holarctica 257]
 gi|407293441|gb|AFT92347.1| 2-octaprenylphenol hydroxylase [Francisella tularensis subsp.
           holarctica FSC200]
          Length = 552

 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 191/427 (44%), Gaps = 33/427 (7%)

Query: 199 IMMAPFADSFGPQFRELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELH 257
           +++ PF   +  + R L   V +R  LE  GP FIK+GQ  + R DL P D+ K++S+L 
Sbjct: 37  LLLNPFY--YSRRVRRLEHGVRIREALEKLGPIFIKFGQALSVRADLLPPDVIKEVSKLQ 94

Query: 258 SKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPI 317
              P        + IE+A  + ++EIF  FE +P+AS S+AQVH A L+           
Sbjct: 95  DNVPPFDNKIAAEQIEKAAKKPINEIFKSFESSPLASASVAQVHAAILQ--------NDD 146

Query: 318 VVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLARE 377
            V VKV  PG+ + ++ D  ++   A + S +  ++  +  E V++       ++DL RE
Sbjct: 147 KVVVKVLRPGIEKILKLDTSLMLFFATLLSKLKEIRRFKPVEIVKEINQSFFDELDLVRE 206

Query: 378 AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS--RYVDELQGHERLKSA 435
           A++ S+   NF        PK  +      V+V     G  VS    +D L    RL   
Sbjct: 207 ASNASQIRRNFEDSAIHYVPKIYWEYTSSTVMVMERVGGVRVSDIETLDALGVDRRL--- 263

Query: 436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL 495
           LA  G       +  D F HADMHPGN+ + V+           + P  I +D G+   L
Sbjct: 264 LAQRGVEIFYSQVFDDCFFHADMHPGNMFIDVSNP---------ADPKYISIDFGIVGTL 314

Query: 496 SKTDRVNLVEFFKAVARRDGRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPE 552
           ++ D+  L   F A  +RD R  AE  +    +         ++ I  V E        E
Sbjct: 315 NRDDQRYLAGNFLAFFKRDYRKVAELHIESGWVPSDTRVDVLESAIRTVCEPIFEKPMKE 374

Query: 553 GDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLL 612
             L +    + QL    RR  +N+   +  +  T   +EG  +KL P  N+ +T + +L 
Sbjct: 375 ISLGY---TLMQLFAVARRFNMNIQPQLTLLQKTLFHVEGLGQKLYPELNIWETSRPILE 431

Query: 613 KADWAKS 619
           K  W K 
Sbjct: 432 K--WMKE 436


>gi|329298144|ref|ZP_08255480.1| putative ubiquinone biosynthesis protein UbiB [Plautia stali
           symbiont]
          Length = 543

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 177/403 (43%), Gaps = 32/403 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           +E  GP +IK+GQ  +TR DLFP  +  +L+ L  +         K  IER+ G  +   
Sbjct: 59  MEQLGPVWIKFGQMLSTRRDLFPPKIADELAILQDRVAPFGGVKAKAQIERSIGGPVETW 118

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           FD F+  P+AS SIAQVH A+L+    G++     V +KV  P +   I+ D  +I  LA
Sbjct: 119 FDDFDIKPLASASIAQVHTATLKSN--GRE-----VVIKVIRPDILPVIKADMKLIYRLA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  ++P  + LR  E V+ +   ++ +++L REAA+  +   NF + + +  PK    
Sbjct: 172 RWVPRLLPDGRRLRPMEVVRDYEKTLIDELNLLREAANAIQLRRNFDQSRMLYVPKVFSD 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                +LV     G  +S  V  L+ H      LA  G       +  D+F HADMHPGN
Sbjct: 232 YCSETMLVMERIYGIPISD-VATLEQHGVNMKLLAERGVQVFFTQVFRDSFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V     +          P  I +D G+   L+K D+  L E F A   RD R  AE  
Sbjct: 291 IFVSYEHPED---------PQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE-- 339

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP------AECMQQLLEKVRRHRVNV 576
             L        P   +E+ +  FA     E     P         +  L    RR  + V
Sbjct: 340 --LHVDSGWVPPNTNVEDFE--FAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEV 395

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
              +  +  T L +EG  R+L P  ++  T +  L   DW K 
Sbjct: 396 QPQLVLLQKTLLYIEGIGRQLYPQLDLWKTAKPFL--EDWIKD 436


>gi|425457367|ref|ZP_18837073.1| Similar to tr|Q8Z0A9|Q8Z0A9 [Microcystis aeruginosa PCC 9807]
 gi|389801287|emb|CCI19522.1| Similar to tr|Q8Z0A9|Q8Z0A9 [Microcystis aeruginosa PCC 9807]
          Length = 549

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 192/407 (47%), Gaps = 38/407 (9%)

Query: 218 HVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG 277
            V+ + L   GP ++K GQ  +TRPDL P +  + L+ L ++ P  ++   +  I    G
Sbjct: 44  EVLKKILVELGPFYVKLGQLLSTRPDLLPANYIEALTALQAQVPPVAWKDIEIVITEQLG 103

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
           + + ++F      P+A+GSI Q+HRA+L     G++     VA+KV  PG+ + + +D  
Sbjct: 104 KPIEQVFKYINTQPIAAGSIGQIHRATL---LSGEE-----VAIKVLRPGIEKIVAQDSA 155

Query: 338 IINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF--RRW---K 392
           +I   A + ++    +   + +  ++F   + +++D  +E  +  +  YN    RW   K
Sbjct: 156 LIKGIADLVALTEFGQSYDVVDLAEEFIKAVNAELDFTQEGHYTDQLRYNLTQSRWSEPK 215

Query: 393 DVSFPKPVYPLVHPAVLVETYEQGEC-----VSRYVDELQGHERLKSALAHIGTHALLKM 447
            +  PK  + L +  +LV  + +G+      VSR   E Q   + KS +  I   +  + 
Sbjct: 216 QLVIPKIYWHLTNSKLLVLEWLEGKQILEADVSRPPTE-QAISQRKSEITRILFRSFFQQ 274

Query: 448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF 507
           + +D F HAD HPGNI              +     V  +D GM   L    +  L E  
Sbjct: 275 IYIDGFFHADPHPGNI-------------FYLDDGRVALIDCGMVGRLDPQTQQILTELL 321

Query: 508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIE-EVD--EAFAFWGTPEGDLVHPAECMQQ 564
            A+   D +  ++ T++LS+      P   ++ EVD       +     + ++ +E + +
Sbjct: 322 LAIVDLDAKRCSQLTIKLSE---SVVPITLVQLEVDYERMLRKYYNLNLNQINFSEVVYE 378

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           LL+  RR+R+ + GN+     +   LEG  RK +P  N+++ ++ LL
Sbjct: 379 LLQVARRNRIKLPGNLGLFAKSLANLEGTARKFNPDINILEEVKPLL 425


>gi|289207288|ref|YP_003459354.1| 2-polyprenylphenol 6-hydroxylase [Thioalkalivibrio sp. K90mix]
 gi|288942919|gb|ADC70618.1| 2-polyprenylphenol 6-hydroxylase [Thioalkalivibrio sp. K90mix]
          Length = 561

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 181/401 (45%), Gaps = 27/401 (6%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           + R LE  GP FIK+GQ  +TR DL P D+  +L+ L  + P   F   +  IE    R 
Sbjct: 59  IRRALEDLGPIFIKFGQMLSTRRDLLPDDIAVELARLQDRVPPFPFEQARALIESELERP 118

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           +   F  FE+ P+AS SIAQVH A+L+    G++     V VKV  PG+ ++IR D  ++
Sbjct: 119 IEIAFARFEDTPIASASIAQVHAATLQ---DGRE-----VVVKVVRPGILKTIRADLEVM 170

Query: 340 NLAAKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
           +L A ++       K LR  E V ++   +  ++DL RE A+ +    NF     +  P+
Sbjct: 171 HLIADLADRYWSEAKRLRPREVVDEYEKTVTDELDLIREGANAAAIHRNFEDSHLLYIPE 230

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
            ++     +VLV     G  V+      + +  LK  LA  G       +   NF HADM
Sbjct: 231 IIWDYTRRSVLVMERIGGIPVADIAALRERNVDLK-LLAERGVEIFFTQVFRHNFFHADM 289

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI V                P  + +D G+   L  +D+  L E F A   RD R  
Sbjct: 290 HPGNIFVDATHP---------DDPTYLAVDFGIVGSLLDSDQRYLAENFHAFFNRDYRRV 340

Query: 519 AECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
           AE  +    + K       +A I  V E    +  P  ++    + + +L +  RR  + 
Sbjct: 341 AELHVESGWVPKDTRVDEFEAAIRTVCE--PIFQRPLEEISF-GQVLLRLFQTARRFNME 397

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADW 616
           V   +  +  T L +EG  R+L P  ++  T +  +   DW
Sbjct: 398 VQPQLVLLQKTLLNIEGLGRQLYPQLDLWTTAKPFI--EDW 436


>gi|417300972|ref|ZP_12088148.1| ubiquinone biosynthesis protein AarF [Rhodopirellula baltica WH47]
 gi|327542724|gb|EGF29192.1| ubiquinone biosynthesis protein AarF [Rhodopirellula baltica WH47]
          Length = 554

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 174/385 (45%), Gaps = 13/385 (3%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  G  FIK GQ  +TR DL   +L  +L++L +  P          IE   G  + E+F
Sbjct: 62  EELGTTFIKLGQVLSTREDLVGSELACELAQLRANTPSDPPDVVIAMIESELGAGMEELF 121

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
             F+   +AS SI QVHRA+    + G       V VKV+HPG+   I  D  I++  A+
Sbjct: 122 LTFDSTAMASASIGQVHRATT---HDGDD-----VVVKVQHPGIERRIVNDLEIMHKLAE 173

Query: 345 ISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
           I+      +   R  +++++F   +M ++D  RE  +++RF  NF+   DV F  P   L
Sbjct: 174 IAEQQSERLSQYRPVDTIREFQRSLMRELDFQRELKNMNRFRANFKDEPDVHFATPYPTL 233

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
               VL      G  +S     ++    L   +AH G    L M+  D F HAD HPGN+
Sbjct: 234 SSRRVLTMQRLDGISISSKAALMKSGADLNE-VAHRGAVVFLDMIFRDGFYHADPHPGNL 292

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
           ++ + Q+ S        K  +  LD GM   +    + +L     A    D  + AE  +
Sbjct: 293 ML-LNQRHSDATPPV--KQVIGLLDCGMVGRIDDVLKEDLEAALIAAVTGDAESIAEIAV 349

Query: 524 RLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTV 583
           RL       +  + + E+ +    +   +      + C++ +   +R HR+ +   V  +
Sbjct: 350 RLGDVPCDFDEPSLVSEIHDMLDDYSDQKIREFDVSACLRDVTGIIREHRIYLPAKVAML 409

Query: 584 MVTTLVLEGWQRKLDPGYNVMDTLQ 608
           +    +LEG   +LDP +++ + L+
Sbjct: 410 LKVLAMLEGTAHQLDPNFSLAELLE 434


>gi|291615431|ref|YP_003525588.1| 2-polyprenylphenol 6-hydroxylase [Sideroxydans lithotrophicus ES-1]
 gi|291585543|gb|ADE13201.1| 2-polyprenylphenol 6-hydroxylase [Sideroxydans lithotrophicus ES-1]
          Length = 507

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 175/388 (45%), Gaps = 31/388 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LET GP F+K+GQ  +TR DL P D+  +L++L  + P    A     +E AFG+ L+++
Sbjct: 56  LETLGPIFVKFGQMLSTRRDLIPTDIADELAKLQDQVPPFPSATAVALLEEAFGKPLNDV 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+E PVAS S+AQVH A L    P  +     VAVK+  PG+   I  D  ++ + A
Sbjct: 116 FAEFDETPVASASVAQVHFAEL----PDGR----DVAVKILRPGIARVIDHDVALLQICA 167

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             I       K L+    V +F  ++  ++D+ RE+A+ S+   NF   + +  P+  + 
Sbjct: 168 GLIERWWEDGKRLKPKLVVAEFEKYLHDELDMMRESANASQLRRNFADARLLLVPEVYWD 227

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                V+V     G  +S+     +    L S LA  G       +  D F HADMHPGN
Sbjct: 228 WCSEKVMVMERMHGIPISQIAALREAGINL-SKLAADGVEIFYTQVFRDGFFHADMHPGN 286

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           ILV                   + LD G+   L+ TD+  L + F A   RD +  AE  
Sbjct: 287 ILV-------------AHDGRYVALDFGIMGTLTDTDKNYLAQNFIAFFNRDYKRVAE-- 331

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
             L  +         ++E + A      P  D     V   + + +L +  RR  + +  
Sbjct: 332 --LHIESGWAPADTRVDEFEAAIRSVCEPIFDKPLREVSFGKVLLRLFQTSRRFGIEIQP 389

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
            +  +  T L +EG   +LDP  ++  T
Sbjct: 390 QLVLLQKTLLNIEGLGLQLDPELDLWKT 417


>gi|421452396|ref|ZP_15901757.1| putative kinase [Streptococcus salivarius K12]
 gi|400182827|gb|EJO17089.1| putative kinase [Streptococcus salivarius K12]
          Length = 525

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 178/389 (45%), Gaps = 36/389 (9%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           +  E  GP+F+K GQ  +TR DL P +  K+LS+L S  P  +       I R     LS
Sbjct: 39  QAFEQLGPSFVKIGQILSTRSDLLPENYIKELSKLQSSVPPLNKEEVMTAIRRELPNELS 98

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           + F  F E P+ASGS+AQ HRA L F   GQ+     V VK++ PG+ E ++ D   I L
Sbjct: 99  DSFLDFSEEPLASGSVAQTHRARLLF---GQE-----VIVKIQRPGIDEVVKED---IQL 147

Query: 342 AAKISSVIPA--VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             K++  IP   +  + + E ++     ++ ++D   EA  +  F  N R    +  P+ 
Sbjct: 148 LIKLARHIPKHFIPMVDVQEVLENLRETLIKELDFRNEAEAMKCFKANNRAVACLGVPEV 207

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQ-GHERLKSALAHIGTHALL---KMLLVDNFIH 455
                 P ++VE Y  G  ++ Y   ++ G++     L  +G   +L   K +  D + H
Sbjct: 208 YDTFTTPHLIVEEYINGIPLNHYSQLIEAGYD-----LEDVGKKLMLSFIKQVFKDGYFH 262

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
            D HPGN+LVR  +              + F+D G+  EL    R +L +   +   +D 
Sbjct: 263 GDPHPGNLLVRDGK--------------IYFIDFGIMGELEVGMRASLNDILYSFTAQDV 308

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
               +  L +++  N  N     ++V++    +   +   +   + +Q L+   +++ + 
Sbjct: 309 DGMTKAILSVTQFDNGLNRAVLSQDVEQMLGRYSGIDLGSLSITDLLQDLMAIFQKNHLK 368

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
               +  +   +L +EG  R+L P  ++M
Sbjct: 369 ASSQITILEKASLQIEGIFRELAPNMDLM 397


>gi|425440828|ref|ZP_18821123.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
 gi|389718653|emb|CCH97426.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
          Length = 549

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 192/407 (47%), Gaps = 38/407 (9%)

Query: 218 HVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG 277
            V+ + L   GP ++K GQ  +TRPDL P +  + L+ L ++ P  ++   +  I     
Sbjct: 44  EVLKKILVELGPFYVKLGQLLSTRPDLLPANYIEALTALQAQVPPVAWTDIEIVITEQLA 103

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
           + + E+F      P+A+GSI Q+HRA+L     G++     VA+KV  PG+ + + +D  
Sbjct: 104 KPIEEVFKYINPQPIAAGSIGQIHRATL---LSGEE-----VAIKVLRPGIEKIVAQDSA 155

Query: 338 IINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF--RRW---K 392
           +I + A + ++    +   + +  ++F   + +++D  +E  +  +  YN    RW   K
Sbjct: 156 LIKVIADLVALTEFGQSYDVVDLAEEFIKAVNAELDFTQEGHYTDQLRYNLTQSRWSEPK 215

Query: 393 DVSFPKPVYPLVHPAVLVETYEQGEC-----VSRYVDELQGHERLKSALAHIGTHALLKM 447
            +  PK  + L +  +LV  + +G+      VSR   E Q   + K+ +  I   +  + 
Sbjct: 216 QLVIPKIYWHLTNSRLLVLEWLEGKQILEADVSRPATE-QAISQRKTEITRILFRSFFQQ 274

Query: 448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF 507
           + +D F HAD HPGNI              +     V  +D GM   L    +  L E  
Sbjct: 275 IYIDGFFHADPHPGNI-------------FYLDDGRVALIDCGMVGRLDPQTQQILTELL 321

Query: 508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIE-EVD--EAFAFWGTPEGDLVHPAECMQQ 564
            A+   D +  ++ T++LS+      P   ++ EVD       +     + ++ +E + +
Sbjct: 322 LAIVDLDAKRCSQLTIKLSE---SVVPITLVQLEVDYERMLRKYYNLNLNQINFSEVVYE 378

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           LL+  RR+R+ + GN+     +   LEG  RK +P  N+++ ++ LL
Sbjct: 379 LLQIARRNRIKLPGNLGLFAKSLANLEGTARKFNPDINILEEVKPLL 425


>gi|326796704|ref|YP_004314524.1| ubiquinone biosynthesis protein ubiB [Marinomonas mediterranea
           MMB-1]
 gi|326547468|gb|ADZ92688.1| ubiquinone biosynthesis protein ubiB [Marinomonas mediterranea
           MMB-1]
          Length = 547

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 178/392 (45%), Gaps = 25/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL P D+  +L++L  + P  S A  KK IER+ G  +  +
Sbjct: 60  LESLGPIFVKFGQILSTRRDLLPDDIADELAKLQDRVPPFSGATAKKIIERSLGDSVENV 119

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F+ F   P+AS SIAQVH A L+    G+      V VKV  P + ++IR+D  ++ + A
Sbjct: 120 FEAFSIEPLASASIAQVHTAKLK---TGED-----VVVKVIRPNIEKTIRQDIGLLYMLA 171

Query: 344 K-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             ++ V    + LR  E V  +   ++ ++DLA+EAA+      NF     +  P+  + 
Sbjct: 172 HFVAKVSTDGRRLRPVEVVTDYEYTILDELDLAKEAANTGLLQRNFTDSPLLYVPQVHWD 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                V+V     G  V+  ++ L         LA  G       +   +F HADMHPGN
Sbjct: 232 YCGKDVMVIERISGIPVAD-IEALNAANVNMKVLAERGVEIFFTQVFSHSFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V V+  +         +P  I +D  +   L   D+  L     A  +RD R  AE  
Sbjct: 291 IFVDVSNPE---------RPKYIAIDCAIMGSLDDEDKSYLARNLLAFFKRDYRMVAELH 341

Query: 523 LRLSKQQNCPNPKAF---IEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           ++           AF   I  V E    +  P  D+    + +  L +  RR  + V   
Sbjct: 342 VQSGWVPKGTPIHAFESAIRSVCE--PMFAKPLKDISF-GQVLLGLFQTARRFNMEVQPQ 398

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L P  ++  T +  L
Sbjct: 399 LVLLEKTLLNIEGLGRQLYPDLDLWVTAKPFL 430


>gi|90417281|ref|ZP_01225207.1| hypothetical protein GB2207_00665 [gamma proteobacterium HTCC2207]
 gi|90330866|gb|EAS46129.1| hypothetical protein GB2207_00665 [marine gamma proteobacterium
           HTCC2207]
          Length = 542

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 186/427 (43%), Gaps = 33/427 (7%)

Query: 189 LYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRD 248
           L L ++ SP+I+      S G + R        + LE+ GP F+K GQ  +TRPDL P D
Sbjct: 30  LPLRLMLSPAILWGKPKVSRGERLR--------KALESLGPIFVKLGQLLSTRPDLVPAD 81

Query: 249 LCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFR 308
           +C +L+ L            ++ +E+A G  + EIF  FE+ P+AS S+AQVH A+L+  
Sbjct: 82  ICTELTNLQDNVAPFDSDKFRQIVEQALGSSVDEIFLRFEKEPLASASVAQVHAATLK-- 139

Query: 309 YPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLAAKISSVIPAVKWLRLDESVQQFAVF 367
             G       V VK   P + ++I +D  ++  LA  ++      + LR  E +  +   
Sbjct: 140 -DGSD-----VVVKAVRPNIEQTISKDIALMYTLARLLAKYSQDGRRLRPVEVIADYEQV 193

Query: 368 MMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQ 427
           +  +++L  E A+ S   +NF     +  PK  +   +  VLV     G  V+  + +L+
Sbjct: 194 IYDELNLQAEGANASLLRHNFDGSPLLYVPKINWDYSNEKVLVMERIYGTPVTN-ISDLE 252

Query: 428 GHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFL 487
                   LA  G       +   NF HADMHPGNI V              SKP  I +
Sbjct: 253 AAGIDFKLLAERGVEIFFTQVFEHNFFHADMHPGNIFVDTRNP---------SKPSYIGI 303

Query: 488 DVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLR---LSKQQNCPNPKAFIEEVDEA 544
           D  +   LSK D+  +     A+ +RD R  AE  +R   + K          I  V E 
Sbjct: 304 DCAIMGSLSKEDQYYMARNLIAIFQRDYRKVAELHIRSGWVPKTTPVNEFTGAIRAVCEP 363

Query: 545 FAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
                  E  L H    +  L    RR  + V  ++  +  T L +EG  R+L P  ++ 
Sbjct: 364 IFQRPLNEISLGH---MLISLFTTARRFNMEVQPSLVLLQKTLLNIEGLGRQLYPQLDLW 420

Query: 605 DTLQTLL 611
            T +  L
Sbjct: 421 TTAKPFL 427


>gi|385332934|ref|YP_005886885.1| ubiquinone biosynthesis protein UbiB [Marinobacter adhaerens HP15]
 gi|311696084|gb|ADP98957.1| ubiquinone biosynthesis protein UbiB [Marinobacter adhaerens HP15]
          Length = 547

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 171/394 (43%), Gaps = 29/394 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+ + L  L  + P       +  IE + G  +S++
Sbjct: 59  LEELGPVFVKFGQILSTRRDLLPDDMAESLKNLQDRVPPFPSNEARSIIETSLGAPVSDL 118

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL-A 342
           F  F   P+AS S+AQVH A+LR    GQK     V VKV  PG+ + IR+D  ++ L A
Sbjct: 119 FAEFSPDPLASASVAQVHAATLR---NGQK-----VVVKVLRPGIEKVIRQDLALMYLMA 170

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +       K L   E V  +   +  ++DL REAA+ S+   NF     +  P   + 
Sbjct: 171 GLLEKYWSEGKRLHPVEVVADYDSTIHDELDLQREAANASQLRRNFENSSLIYIPFIDWD 230

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
               +VLV     G  ++     L+        LA  G       +  D+F HADMHPGN
Sbjct: 231 YTRKSVLVMERIHGIPIADTA-ALKAAGVDMKVLAEKGVEIFFTQVFRDSFFHADMHPGN 289

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V  +           S P  I +D G+   L+  D+  L     A  RRD R  A+  
Sbjct: 290 IFVDTSNP---------SDPRYIAIDFGIVGTLAPDDQSYLARNLLAFFRRDYRQVAQ-- 338

Query: 523 LRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             L  Q     P   + + + A        +  P  D+      + +L +  RR  + V 
Sbjct: 339 --LHIQSGWVPPDTPVNQFEAAIRTVCEPIFEKPLKDISF-GHFLLRLFQTARRFNMEVQ 395

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 396 PQLVLLQKTLLNVEGLGRQLYPDLDLWSTAQPYL 429


>gi|254368689|ref|ZP_04984703.1| 2-octaprenylphenol hydroxylase [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157121604|gb|EDO65781.1| 2-octaprenylphenol hydroxylase [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 552

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 191/427 (44%), Gaps = 33/427 (7%)

Query: 199 IMMAPFADSFGPQFRELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELH 257
           +++ PF   +  + R L   V +R  LE  GP FIK+GQ  + R DL P D+ K++S+L 
Sbjct: 37  LLLNPFY--YSRRVRRLEHGVRIREALEKLGPIFIKFGQALSVRADLLPPDVIKEVSKLQ 94

Query: 258 SKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPI 317
              P        + IE+A  + ++EIF  FE +P+AS S+AQVH A L+           
Sbjct: 95  DNVPPFDNKIAAEQIEKAAKKPINEIFKSFESSPLASASVAQVHAAILQ--------NDD 146

Query: 318 VVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLARE 377
            V VKV  PG+ + ++ D  ++   A + S +  ++  +  E V++       ++DL RE
Sbjct: 147 KVVVKVLRPGIEKILKLDTSLMLFFATLLSKLKEIRRFKPVEIVKEINQSFFDELDLVRE 206

Query: 378 AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS--RYVDELQGHERLKSA 435
           A++ S+   NF        PK  +      V+V     G  VS    +D L    RL   
Sbjct: 207 ASNASQIRRNFEDSAIHYVPKIYWEYTSSTVMVMERVGGVRVSDIETLDALGVDRRL--- 263

Query: 436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL 495
           LA  G       +  D F HADMHPGN+ + V+           + P  I +D G+   L
Sbjct: 264 LAQRGVEIFYSQVFDDCFFHADMHPGNMFIDVSNP---------ADPKYISIDFGIVGTL 314

Query: 496 SKTDRVNLVEFFKAVARRDGRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPE 552
           ++ D+  L   F A  +RD R  AE  +    +         ++ I  V E        E
Sbjct: 315 NRDDQRYLAGNFLAFFKRDYRKVAELHIESGWVPSDTRVDVLESAIRTVCEPIFEKPMKE 374

Query: 553 GDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLL 612
             L +    + QL    RR  +N+   +  +  T   +EG  +KL P  N+ +T + +L 
Sbjct: 375 ISLGY---TLMQLFAVARRFNMNIQPQLTLLQKTLFHVEGLGQKLCPELNIWETSRPILE 431

Query: 613 KADWAKS 619
           K  W K 
Sbjct: 432 K--WMKE 436


>gi|418017854|ref|ZP_12657410.1| 2-octaprenylphenol hydroxylase [Streptococcus salivarius M18]
 gi|345526703|gb|EGX30014.1| 2-octaprenylphenol hydroxylase [Streptococcus salivarius M18]
          Length = 525

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 177/389 (45%), Gaps = 36/389 (9%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           +  E  GP+F+K GQ  +TR DL P    ++LS+L S  P  +       I R     LS
Sbjct: 39  QAFEQLGPSFVKIGQILSTRSDLLPEAYIRELSKLQSSVPPLNKEEVMTAIRRELPSGLS 98

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           + F  F E P+ASGS+AQ HRA L     GQ+     V VK++ PG+ E ++ D   I L
Sbjct: 99  DSFLDFSEEPLASGSVAQTHRARL---LSGQE-----VIVKIQRPGIDEVVKED---IQL 147

Query: 342 AAKISSVIPA--VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             K++  IP   +  + + E ++     ++ ++D   EA  + RF  N R    +  PK 
Sbjct: 148 LIKLARHIPKHFIPMVDVQEVLENLRETLIKELDFRNEAEAMKRFKANNRAVACLGVPKV 207

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQ-GHERLKSALAHIGTHALL---KMLLVDNFIH 455
                 P ++VE Y  G  ++ Y   L+ G++     L  +G   +L   K +  D + H
Sbjct: 208 YDTFTTPHLIVEEYIDGIPLNDYSQLLEAGYD-----LEDVGKKLMLSFIKQVFKDGYFH 262

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
            D HPGN+LVR  +              + F+D G+  EL    R +L +   +   +D 
Sbjct: 263 GDPHPGNLLVRDGK--------------ICFIDFGIMGELEVGMRASLNDILYSFTAQDV 308

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
               +  L +++  N  N     ++V++    +   +   +   + ++ LL   +++ + 
Sbjct: 309 DGMTKAILSVTQFDNALNRAVLSQDVEQMLGRYSGVDLGSLSMTDLLEDLLAIFQKNHLK 368

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
               +  +   +L +EG  R+L P  ++M
Sbjct: 369 ASSQITILEKASLQIEGIFRELAPNMDLM 397


>gi|294637989|ref|ZP_06716254.1| 2-polyprenylphenol 6-hydroxylase [Edwardsiella tarda ATCC 23685]
 gi|451967285|ref|ZP_21920530.1| putative ubiquinone biosynthesis protein UbiB [Edwardsiella tarda
           NBRC 105688]
 gi|291088861|gb|EFE21422.1| 2-polyprenylphenol 6-hydroxylase [Edwardsiella tarda ATCC 23685]
 gi|451314003|dbj|GAC65892.1| putative ubiquinone biosynthesis protein UbiB [Edwardsiella tarda
           NBRC 105688]
          Length = 543

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 175/393 (44%), Gaps = 26/393 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+T GP +IK+GQ  +TR DLF   +  +L+ L  +      A  ++ IE A G  LS+ 
Sbjct: 61  LQTLGPVWIKFGQMLSTRRDLFAPAIADQLALLQDRVAPFDGALARQQIEAALGGDLSQW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           FD F+   +AS SIAQVH A+LR    G++     V +KV  P +   IR D  ++  LA
Sbjct: 121 FDHFDSQALASASIAQVHTATLREN--GRE-----VVLKVIRPDIQPIIRADIRLMYRLA 173

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  ++P  + LR  E V+++   ++ +++L REAA+  +   NF     +  P+    
Sbjct: 174 GWVPKLLPDGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFDGSPMLYVPEVFSD 233

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
               +VLV     G  VS  +  L+        LA  G       +  D+F HADMHPGN
Sbjct: 234 YCRESVLVMERIYGVPVSD-IAALRAQNTNMKLLAERGVQVFFTQVFRDSFFHADMHPGN 292

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V     +          P  I +D G+   L+K D+  L E F A   RD R  AE  
Sbjct: 293 IFVSYDHPQD---------PQYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRKVAE-- 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTP----EGDLVHPAECMQQLLEKVRRHRVNVDG 578
             L        P   +EE + A      P      D +     +  L    RR  + V  
Sbjct: 342 --LHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLDQISFGHVLLNLFNTARRFNMEVQP 399

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++  T +  L
Sbjct: 400 QLVLLQKTLLYVEGLGRQLYPQLDLWTTAKPFL 432


>gi|115352831|ref|YP_774670.1| ubiquinone biosynthesis protein UbiB [Burkholderia ambifaria AMMD]
 gi|115282819|gb|ABI88336.1| 2-octaprenylphenol hydroxylase [Burkholderia ambifaria AMMD]
          Length = 525

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 175/393 (44%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL   D   +L++L  + P    A     IE++ G  + E+
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLSVDFANELAKLQDQVPPFDSAVAIAIIEKSLGAPVDEL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           FD FE  P+AS SIAQVH   L+      K     VAVKV  P +   I  D  ++ ++A
Sbjct: 116 FDEFEREPIASASIAQVHFGKLKQGVHAGK----AVAVKVLRPNMLPVIDSDLALMRDIA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 172 TWTERMWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWD 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VLV     G  +S+ V+ L+        LA  G       +  D F HADMHPGN
Sbjct: 232 FSTSQVLVMERMTGVPISQ-VETLRTAGVDIKKLAREGVEIFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +  K   +          I LD G+   LS  D+  L + F A  +RD    A   
Sbjct: 291 IQVSLDPKTFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLH 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
           L    +     P+  +EE++ A      P  D     +   + + +L    RR  V +  
Sbjct: 342 L----ESGWVPPETRVEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 398 QLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|440712672|ref|ZP_20893286.1| ubiquinone biosynthesis protein AarF [Rhodopirellula baltica SWK14]
 gi|436442511|gb|ELP35633.1| ubiquinone biosynthesis protein AarF [Rhodopirellula baltica SWK14]
          Length = 554

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 173/385 (44%), Gaps = 13/385 (3%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  G  FIK GQ  +TR DL   +L  +L++L +  P          IE   G  + E+F
Sbjct: 62  EELGTTFIKLGQVLSTREDLVGSELACELAQLRANTPSDPPDVVIAMIESELGAGMEELF 121

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
             F+   +AS SI QVHRA+    + G       V VKV+HPG+   I  D  I+   A+
Sbjct: 122 LTFDSTAMASASIGQVHRATT---HDGHD-----VVVKVQHPGIERRIVNDLEIMQKLAE 173

Query: 345 ISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
           I+      +   R  +++++F   +M ++D  RE  +++RF  NF+   DV F  P   L
Sbjct: 174 IAEQQSERLSQYRPVDTIREFQRSLMRELDFQRELKNMNRFRANFKDEPDVHFATPYPTL 233

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
               VL      G  +S     ++    L   +AH G    L M+  D F HAD HPGN+
Sbjct: 234 SSRRVLTMQRLDGISISSKAALMKSGADLNE-VAHRGAVVFLDMIFRDGFYHADPHPGNL 292

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
           ++ + Q+ S        K  +  LD GM   +    + +L     A    D  + AE  +
Sbjct: 293 ML-LNQRHSDATPPV--KQVIGLLDCGMVGRIDNVLKEDLEAALIAAVTGDAESIAEIAV 349

Query: 524 RLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTV 583
           RL       +  + + E+ +    +   +      + C++ +   +R HR+ +   V  +
Sbjct: 350 RLGDVPCDFDEPSLVSEIHDMLDDYSDQKIREFDVSACLRDVTGIIREHRIYLPAKVAML 409

Query: 584 MVTTLVLEGWQRKLDPGYNVMDTLQ 608
           +    +LEG   +LDP +++ + L+
Sbjct: 410 LKVLAMLEGTAHQLDPNFSLAELLE 434


>gi|398879229|ref|ZP_10634329.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM67]
 gi|398197186|gb|EJM84171.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM67]
          Length = 534

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 177/393 (45%), Gaps = 25/393 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L +L  + P      + K IE   G+++SE
Sbjct: 62  ALQDLGPIFIKFGQILSTRRDLLPEDIADELMKLQDRVPPFDSQVSVKLIEEQLGKKISE 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + 
Sbjct: 122 VFSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPIIAQDLAWLFIL 173

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ +  + A  + L   + V  +   +  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 174 ARAAEKLSADARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFDGSPLLYVPQVYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  V+           +K  LA  G       +  D+F HADMHPG
Sbjct: 234 DWCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V      S         P  I +D G+   L+  D+  L     A  +RD R  A+ 
Sbjct: 293 NIFVSTVNPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQL 343

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V  
Sbjct: 344 HIDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQP 400

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 401 QLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|260913260|ref|ZP_05919742.1| 2-polyprenylphenol 6-hydroxylase [Pasteurella dagmatis ATCC 43325]
 gi|260632847|gb|EEX51016.1| 2-polyprenylphenol 6-hydroxylase [Pasteurella dagmatis ATCC 43325]
          Length = 531

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 179/407 (43%), Gaps = 33/407 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP +IK GQ  +TR DLFP ++  +L+ L  +         ++ IE+A G  L   
Sbjct: 61  LQELGPVWIKLGQMLSTRRDLFPLEIADELALLQDQVEPFDGKIARQQIEKALGAPLETW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKP------IVVAVKVRHPGVGESIRRDFV 337
           FD F+E  +AS SIAQVH A  +   P   V          V  KV  P + + I  D  
Sbjct: 121 FDEFDENALASASIAQVHTAKFKQNLPHLNVNSEDNLANKEVVFKVLRPNIQQMIDAD-- 178

Query: 338 IINLAAKISSVIPAVKW----LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKD 393
            ++L  K++S +P +K     LR  E V+++   +  ++DL RE A+  +   NF     
Sbjct: 179 -LSLMYKLASWLPRLKAEGRRLRPVEVVREYEKTLRDELDLRREMANAIQLRANFENSPM 237

Query: 394 VSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNF 453
           +  PK      H  V+V     G  VS  V EL+ +      LA  G       +  D+F
Sbjct: 238 LYIPKMYKQFCHQNVIVMERIYGIPVSN-VSELEANGTNMKLLAERGVQVFFTQVFRDSF 296

Query: 454 IHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARR 513
            HADMHPGNI V          R     P  I +D G+   L++ D+  L E F A   R
Sbjct: 297 FHADMHPGNIFV---------SREHPENPQYIGIDCGIIGRLNEHDKRYLAESFVAFFNR 347

Query: 514 DGRTAAECTLR---LSKQQNCPN-PKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKV 569
           D R  AE  +      K  N  +  +AF E  +  FA    P  ++      +  L    
Sbjct: 348 DYRRVAEMHVASGWTPKDTNIDDFEQAFREVCEPIFA---KPLSEISF-GHVLFNLFNVA 403

Query: 570 RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADW 616
           R + + V   +  +  T L +EG  R+L P  ++ DT +  L   DW
Sbjct: 404 REYNMEVQPQLVLLQKTLLYIEGLGRQLYPQLDLWDTAKPFL--QDW 448


>gi|398882034|ref|ZP_10637006.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM60]
 gi|398199753|gb|EJM86688.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM60]
          Length = 534

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 177/393 (45%), Gaps = 25/393 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L +L  + P      + K IE   G+++SE
Sbjct: 62  ALQDLGPIFIKFGQILSTRRDLLPEDIADELMKLQDRVPPFDSQVSVKLIEEQLGKKISE 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + 
Sbjct: 122 VFSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPIIAQDLAWLFIL 173

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ +  + A  + L   + V  +   +  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 174 ARAAEKLSADARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFDGSALLYVPQVYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  V+           +K  LA  G       +  D+F HADMHPG
Sbjct: 234 DWCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V      S         P  I +D G+   L+  D+  L     A  +RD R  A+ 
Sbjct: 293 NIFVSTVNPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQL 343

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V  
Sbjct: 344 HIDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQP 400

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 401 QLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|258546234|ref|ZP_05706468.1| 2-polyprenylphenol 6-hydroxylase [Cardiobacterium hominis ATCC
           15826]
 gi|258518500|gb|EEV87359.1| 2-polyprenylphenol 6-hydroxylase [Cardiobacterium hominis ATCC
           15826]
          Length = 533

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 188/402 (46%), Gaps = 32/402 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP F+K GQ  +TRPDL   DL  +LS+L  K P    +  +  IE A G  +  +
Sbjct: 61  LQDLGPIFVKLGQTLSTRPDLLSPDLLAELSQLQDKVPPFPGSEARALIEAALGEPIDAV 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+E  +AS S+AQVH A+L+    G+      V VKV  PGV +++  D  ++   A
Sbjct: 121 FAAFDETALASASVAQVHAATLQ---SGED-----VVVKVLRPGVEKAVAADIALMYQLA 172

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
           ++++     + LR  E V++F   + +++DL  EAA+ S+   NF+    +  P+  +  
Sbjct: 173 RLANCTSDGRRLRPVEVVREFENTLANELDLMFEAANASQLRANFKNSPLLYVPEVHWRY 232

Query: 404 VHPAVLVETYEQGECVSRYVDELQGH---ERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
               ++V    +   ++   DE   H     LK  LA  G       +  D+F HADMHP
Sbjct: 233 CRKNIMVMERIRATNIA---DETAIHAAGTNLK-VLAERGVEIFFTQVFRDSFFHADMHP 288

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V   Q ++         P    +D G+   L+  D+  L E F A   RD R  AE
Sbjct: 289 GNIFVYTDQPET---------PRYCAIDFGIMGSLTPEDQHYLAENFLAFFNRDYRRVAE 339

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             +    + +     + +A I +V E    +G P  ++   A  +  L +  RR  +++ 
Sbjct: 340 LHVESGWVPRDTRVTDFEAAIRKVSE--PIFGKPIKEISFGA-FLVSLFQTARRFNMHIQ 396

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
             +  +  T   +EG  R+L P  ++  T + +L    W K+
Sbjct: 397 PQLVLLQKTFFNVEGLGRRLYPELDLWTTAKPVL--EAWMKT 436


>gi|359439792|ref|ZP_09229724.1| probable ubiquinone biosynthesis protein UbiB [Pseudoalteromonas
           sp. BSi20429]
 gi|358038396|dbj|GAA65973.1| probable ubiquinone biosynthesis protein UbiB [Pseudoalteromonas
           sp. BSi20429]
          Length = 534

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 173/404 (42%), Gaps = 30/404 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSE 282
           L+  GP +IK+GQ  +TR DL P D+  +L+ L  +      A  +K IE+A     +SE
Sbjct: 58  LQELGPVWIKFGQMLSTRRDLLPHDIALELAFLQDQVQPFEGALAQKIIEKALEINDISE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F + P+AS SIAQVH A L      Q ++  VV +KV  P + E I  D  ++   
Sbjct: 118 LFSEFSQIPLASASIAQVHTAKL---IDEQSIEQDVV-IKVIRPNIYEQINADLALMEKL 173

Query: 343 AKI-SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AK+ + V    K LR  E V+++   ++ ++DL RE A+  +   NF     +  P    
Sbjct: 174 AKVLAKVHNESKRLRPVEVVKEYKKTLLDELDLMREGANGIQLKRNFEGSDSLYIPAVYS 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VLV     G  VS   D L         LA  G       +  D+F HADMHPG
Sbjct: 234 DYSRSNVLVMERIYGIPVSD-TDALLAQNTNMKLLAERGVEVFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V          R     P  I +D G+   L+K D+  L E F A   RD R  A+ 
Sbjct: 293 NIFV---------SREHPENPKYIGIDCGIVGTLNKEDKRYLAENFIAFFNRDYRQVAQ- 342

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP------AECMQQLLEKVRRHRVN 575
              L        P   IEE +  FA     E     P         +  L    RR  + 
Sbjct: 343 ---LHVDSGWVPPDTSIEEFE--FAIRTVCEPIFNKPLAEISFGHVLVNLFNTARRFNMQ 397

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           V   +  +  T L +EG  R+L P  ++  T +  L   DW K 
Sbjct: 398 VQPQLVLLQKTLLYVEGLGRQLYPQLDLWKTAKPFL--EDWVKQ 439


>gi|408375569|ref|ZP_11173233.1| ABC1 family protein, ubiquinone biosynthesis protein [Alcanivorax
           hongdengensis A-11-3]
 gi|407764590|gb|EKF73063.1| ABC1 family protein, ubiquinone biosynthesis protein [Alcanivorax
           hongdengensis A-11-3]
          Length = 553

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 177/389 (45%), Gaps = 24/389 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           +E  GP F+K GQ  ATR DLFP D   +  +L  +A    +   +  IE A G+ +  +
Sbjct: 66  MEEMGPTFVKLGQILATRVDLFPMDWIAEFEKLQDQAQPVPYPDIRPLIEEALGKPVEAV 125

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F   +E P+   SI QVH A  R    G+K     V +KV+ PG+ + I  D  +++  A
Sbjct: 126 FARIDEQPLGVASIGQVHGALTRR---GEK-----VVLKVQKPGIRDKIDSDLRLLDQLA 177

Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           K++S     ++  R  E V++F   +M ++D   EA +  R   N R  K ++ PK  + 
Sbjct: 178 KLASDNSVDLRRYRPVELVREFRRSLMRELDFTVEARNADRIRKNLRSLKWLTVPKVYWD 237

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                + V+    G   +R +++L      +  +A  G     KM L D F HAD HPGN
Sbjct: 238 YSSSTLQVQQRVDG-MPARALEQLDQAGIDRKLVARRGAMVAWKMALEDGFFHADPHPGN 296

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
            +++   +             +  LD GM  +LS + R  +++  KA   RD    A   
Sbjct: 297 FIIQPGNR-------------IAMLDFGMVGKLSNSRREQILQIIKATVFRDAEQGAAVL 343

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCT 582
              ++ Q     +   +  D    + G    +L  PA  +  +   VR H + +  ++  
Sbjct: 344 THWAEGQPVKLDQLVADVEDVISQYHGVSLAELNIPA-LLNDITALVRNHNLILPSDIAL 402

Query: 583 VMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           ++   + LEG+ R L+P +++M   + L+
Sbjct: 403 LIKALITLEGFGRMLNPDFDLMTEAEPLI 431


>gi|398839765|ref|ZP_10597009.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM102]
 gi|398112127|gb|EJM01995.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM102]
          Length = 534

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 177/393 (45%), Gaps = 25/393 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L  L  + P      + + IE   G+++SE
Sbjct: 62  ALQDLGPIFIKFGQILSTRRDLLPEDIADELMMLQDRVPPFDSQVSIRLIEEQLGKKISE 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + 
Sbjct: 122 VFSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPIIAQDLAWLFIL 173

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ +  + A  + L   + V  +   +  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 174 ARAAEKLSADARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  V+           +K  LA  G       +  D+F HADMHPG
Sbjct: 234 DWCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V   Q  S         P  I +D G+   L+  D+  L     A  +RD R  A+ 
Sbjct: 293 NIFVSTVQPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQL 343

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V  
Sbjct: 344 HIDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQP 400

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 401 QLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|90078528|dbj|BAE88944.1| unnamed protein product [Macaca fascicularis]
          Length = 342

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 144/291 (49%), Gaps = 43/291 (14%)

Query: 335 DFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV 394
           D +++ + +++  ++P +KWL L E V++F   M+ Q+DL  EA +L  F  NF+  K V
Sbjct: 2   DLLLMKIGSRVLGLLPGIKWLSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFQNVKAV 61

Query: 395 SFPKPVYPLVHPAVLVETYEQGECVSRY------VDELQGHERLKSALAHIGTHALLKML 448
            FP P+ P V   VLVETYE+   VS Y      VD       LK  +A +G + LLKM+
Sbjct: 62  KFPTPLRPFVTREVLVETYEESVPVSSYQQAGIPVD-------LKRKIARLGINMLLKMI 114

Query: 449 LVDNFIHADMHPGNILVRVAQKKSSQKR-----------LFRSKP------HVIFLDVGM 491
            VDNF+HAD+HPGNILV+ A   SS +            L  + P       ++ LD G+
Sbjct: 115 FVDNFVHADLHPGNILVQGADSLSSSQEAQLQQADVCDTLVVAVPSSLCPLRLVLLDAGI 174

Query: 492 TAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTP 551
            AEL  +D  N    F AV    G+  AE  L  ++   C + + F  E+          
Sbjct: 175 VAELQASDLRNFRAVFMAVVMGQGQRVAELILHHARASECRDVEGFKTEM---------- 224

Query: 552 EGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYN 602
              LV  A      LEK+  H  ++  +V  +++T  VL G  R+ +  ++
Sbjct: 225 -ATLVTQARKNTITLEKL--HVSSLLSSVFKLLMTHKVLRGRSRQAERSWD 272


>gi|42783944|ref|NP_981191.1| ABC1 family protein [Bacillus cereus ATCC 10987]
 gi|42739874|gb|AAS43799.1| ABC1 family protein [Bacillus cereus ATCC 10987]
          Length = 558

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 183/387 (47%), Gaps = 33/387 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK GQ A+TRPDL P D+  +L +L  K    S+   K+ IE      + +I
Sbjct: 63  LEELGPTFIKIGQIASTRPDLIPADIIHELEQLQDKVSSFSYQEVKQIIEEELDCAIEDI 122

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F+ F+E P+A+ SI QVH   L+    G++     VA+K++ P + + I  D  I+   A
Sbjct: 123 FEEFQENPLAAASIGQVHYGLLK---SGER-----VAIKIQRPNIEKIIETDLEILQHLA 174

Query: 344 KISSVIPAVKW---LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           +++ +   ++W    +L + +++ +  + ++++   E  +  +  + F+   ++  PK  
Sbjct: 175 ELAEI--RLEWAARYQLRDIIEELSKSLRAELNYTIEGQNAEKVAHQFKYNPNICVPKVY 232

Query: 401 YPLVHPAVLVETYEQGECVS--RYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
           +      VL   Y +G  ++  + +D  QG  R    LA     ++L  +L++ F H D 
Sbjct: 233 WDYTTSKVLTMEYIEGIKLNELKKMDN-QGLNR--KVLAERVVQSILHQILIEGFFHGDP 289

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI             +F     ++F+D GM   LS   + +L     ++ R++ R  
Sbjct: 290 HPGNI-------------IFLPGEVIVFMDFGMVGSLSPELKQHLASLVISMMRQNTRGV 336

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDE-AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
            +   ++    +  N K    +V+     ++  P   L    + +Q+L     +H + + 
Sbjct: 337 IKAITQMGLVPDDVNMKQLTADVEYLKQNYYDVPLSQL-SLGKAVQELFNIAYKHHIQIP 395

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVM 604
            ++  +  T L +EG   KLDP  +++
Sbjct: 396 SDITLLGKTLLTIEGLVEKLDPELSIL 422


>gi|107023664|ref|YP_621991.1| ubiquinone biosynthesis protein UbiB [Burkholderia cenocepacia AU
           1054]
 gi|116690749|ref|YP_836372.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           cenocepacia HI2424]
 gi|170734091|ref|YP_001766038.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           cenocepacia MC0-3]
 gi|206559269|ref|YP_002230030.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           cenocepacia J2315]
 gi|421868536|ref|ZP_16300184.1| Ubiquinone biosynthesis monooxygenase UbiB [Burkholderia
           cenocepacia H111]
 gi|444362544|ref|ZP_21163055.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia cenocepacia BC7]
 gi|444372509|ref|ZP_21171956.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia cenocepacia
           K56-2Valvano]
 gi|105893853|gb|ABF77018.1| 2-octaprenylphenol hydroxylase [Burkholderia cenocepacia AU 1054]
 gi|116648838|gb|ABK09479.1| 2-octaprenylphenol hydroxylase [Burkholderia cenocepacia HI2424]
 gi|169817333|gb|ACA91916.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia cenocepacia MC0-3]
 gi|198035307|emb|CAR51182.1| putative ubiquinone biosynthesis protein [Burkholderia cenocepacia
           J2315]
 gi|358071558|emb|CCE51062.1| Ubiquinone biosynthesis monooxygenase UbiB [Burkholderia
           cenocepacia H111]
 gi|443593452|gb|ELT62191.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia cenocepacia
           K56-2Valvano]
 gi|443596629|gb|ELT65121.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia cenocepacia BC7]
          Length = 525

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 175/393 (44%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL   D   +L++L  + P    A     IE++ G  + E+
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLSVDFANELAKLQDQVPPFDSAVAIAIIEKSLGAPVDEL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           FD FE  P+AS SIAQVH A L+      K     VAVKV  P +   I  D  ++ ++A
Sbjct: 116 FDEFEREPIASASIAQVHFAKLKQGVHAGK----AVAVKVLRPNMLPVIDSDLALMRDIA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 172 TWTERMWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWD 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VLV     G  +S+ V+ L+        LA  G       +  D F HADMHPGN
Sbjct: 232 FSTSQVLVMERMTGVPISQ-VETLRSAGVDIKKLAREGVEIFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +      +          I LD G+   LS  D+  L + F A  +RD    A   
Sbjct: 291 IQVSLDPNTFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLH 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
           L    +     P+  +EE++ A      P  D     +   + + +L    RR  V +  
Sbjct: 342 L----ESGWVPPETRVEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 398 QLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|421609349|ref|ZP_16050545.1| ubiquinone biosynthesis protein AarF [Rhodopirellula baltica SH28]
 gi|408499846|gb|EKK04309.1| ubiquinone biosynthesis protein AarF [Rhodopirellula baltica SH28]
          Length = 554

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 174/385 (45%), Gaps = 13/385 (3%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  G  FIK GQ  +TR DL   +L  +L++L +  P          IE   G  + E+F
Sbjct: 62  EELGTTFIKLGQVLSTREDLVGSELACELAQLRANTPSDLPDVVIAMIESELGAGMEELF 121

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAK 344
             F+   +AS SI QVHRA+    + G  V      VKV+HPG+   I  D  I+   A+
Sbjct: 122 LTFDSTAMASASIGQVHRATT---HDGHDV-----VVKVQHPGIERRIVNDLEIMQKLAE 173

Query: 345 ISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
           I+      +   R  +++++F   +M ++D  RE  +++RF  NF+   DV F  P   L
Sbjct: 174 IAEQQSERLSQYRPVDTIREFQRSLMRELDFQRELKNMNRFRANFKDEPDVHFATPYPTL 233

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
               VL      G  +S     ++    L   +AH G    L M+  D F HAD HPGN+
Sbjct: 234 SSRRVLTMQRLDGISISSKAALMKTGADLNE-VAHRGAVVFLDMIFRDGFYHADPHPGNL 292

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
           ++   +   ++  +   K  +  LD GM   +    + +L     A    D  + AE  +
Sbjct: 293 MLLNQEHSDARPPV---KQVIGLLDCGMVGRIDDVLKEDLEAALIAAVTGDAESIAEIAV 349

Query: 524 RLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTV 583
           RL       +  + + E+ +    +   +      + C++ +   +R+HR+ +   V  +
Sbjct: 350 RLGDVPCDFDEPSLVSEIHDMLDDYSDQKIREFDVSACLRDVTGIIRQHRIYLPAKVAML 409

Query: 584 MVTTLVLEGWQRKLDPGYNVMDTLQ 608
           +    +LEG   +LDP +++ + L+
Sbjct: 410 LKVLAMLEGTAHQLDPNFSLAELLE 434


>gi|332533488|ref|ZP_08409351.1| ubiquinone biosynthesis monooxygenase UbiB [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332037035|gb|EGI73493.1| ubiquinone biosynthesis monooxygenase UbiB [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 533

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 171/403 (42%), Gaps = 30/403 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSE 282
           L+  GP +IK+GQ  +TR DL P D+  +L+ L  +         +K IE+A     +SE
Sbjct: 58  LQELGPVWIKFGQMLSTRRDLLPHDIALELAFLQDQVQPFEGELAQKIIEKALEINDISE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F + P+AS SIAQVH A L   +  ++     V +KV  P + E I  D  ++   
Sbjct: 118 LFSEFSQTPLASASIAQVHTAKLIDEHSIEQ----DVVIKVIRPNIYEQINADLALMEKL 173

Query: 343 AKI-SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AK+ + V    K LR  E V+++   ++ ++DL RE A+  +   NF     +  P    
Sbjct: 174 AKVLAKVHNESKRLRPVEVVKEYKKTLLDELDLMREGANGIQLKRNFEGSDSLYIPAVYS 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VLV     G  VS   D L         LA  G       +  D+F HADMHPG
Sbjct: 234 DYSRSNVLVMERIYGIPVSD-TDALMAQNTNMKLLAERGVEVFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V          R     P  I +D G+   LSK D+  L E F A   RD R  A+ 
Sbjct: 293 NIFV---------SREHPENPMYIGIDCGIVGTLSKEDKRYLAENFIAFFNRDYRQVAQ- 342

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP------AECMQQLLEKVRRHRVN 575
              L        P   IEE +  FA     E     P         +  L    RR  + 
Sbjct: 343 ---LHVDSGWVPPDTSIEEFE--FAIRTVCEPIFNKPLAEISFGHVLVNLFNTARRFNMQ 397

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAK 618
           V   +  +  T L +EG  R+L P  ++  T +  L   DW K
Sbjct: 398 VQPQLVLLQKTLLYVEGLGRQLYPQLDLWKTAKPFL--EDWVK 438


>gi|172061688|ref|YP_001809340.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           ambifaria MC40-6]
 gi|171994205|gb|ACB65124.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia ambifaria MC40-6]
          Length = 525

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 175/393 (44%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL   D   +L++L  + P    A     IE++ G  + E+
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLSVDFANELAKLQDQVPPFDSAVAIAIIEKSLGAPVDEL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           FD FE  P+AS SIAQVH   L+      K     VAVKV  P +   I  D  ++ ++A
Sbjct: 116 FDEFEREPIASASIAQVHFGKLKQGVHAGK----AVAVKVLRPNMLPVIDSDLALMRDIA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 172 TWTERMWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWD 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VLV     G  +S+ V+ L+        LA  G       +  D F HADMHPGN
Sbjct: 232 FSTSQVLVMERMTGVPISQ-VETLRTAGVDIKKLAREGVEIFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +  K   +          I LD G+   LS  D+  L + F A  +RD    A   
Sbjct: 291 IQVSLDPKTFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLH 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
           L    +     P+  +EE++ A      P  D     +   + + +L    RR  V +  
Sbjct: 342 L----ESGWVPPETRVEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 398 QLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|409991271|ref|ZP_11274547.1| ABC-1 domain-containing protein [Arthrospira platensis str. Paraca]
 gi|409937864|gb|EKN79252.1| ABC-1 domain-containing protein [Arthrospira platensis str. Paraca]
          Length = 588

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 174/400 (43%), Gaps = 33/400 (8%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V  +L   GP FIK GQ  +TR DLFP +  ++LS+L  + P   +   ++ I++ FG+ 
Sbjct: 92  VRESLLDLGPTFIKLGQLFSTRADLFPGEYVEELSKLQDRVPAFPYEQCREIIDQDFGKS 151

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           + ++F  F+  P+A+ S+ QVH+A L   Y G       V VKV+ PG+ +    D  I+
Sbjct: 152 VEQLFRNFDPVPLAAASLGQVHKAQL---YSGAD-----VVVKVQRPGLKQLFEVDLAIL 203

Query: 340 NLAAKISSVIPAVKWLRLDESV---QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF 396
              A+     P  KW R  + +    +    +  ++D   E  +   F  NFR    V  
Sbjct: 204 KGIARYFQNHP--KWGRGRDWLGIYDECCRILWEEIDYLNEGRNADTFRRNFRHCDWVQV 261

Query: 397 PKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHA 456
           P+  +    P VL   Y  G  +S Y + L+     +  LA +G  A L+ LL D F HA
Sbjct: 262 PRVCWQFSSPRVLTLEYLPGIKISNY-EALEASGLDRKQLAQMGAKAYLQQLLNDGFFHA 320

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           D HPGNI V      S Q +L       IF D GM   ++   R  L+E    +A +DG 
Sbjct: 321 DPHPGNIAV------SPQGQL-------IFYDFGMMGRITSNLREKLMETLFGIANKDGD 367

Query: 517 TAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
              +  +    L+   +    +  I+ + + F      E  +   A     L E      
Sbjct: 368 RVVKSLIEVGALAPTGDMSPVRRSIQYMLDNFMDQPFEEQSI---AAISDDLYEIAYDQP 424

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
                    VM     LEG  + LDP +N M+  Q   ++
Sbjct: 425 FRFPATFTFVMRAFSTLEGVGKGLDPEFNFMEVAQPFAIQ 464


>gi|398870775|ref|ZP_10626095.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM74]
 gi|398207404|gb|EJM94153.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM74]
          Length = 534

 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 177/392 (45%), Gaps = 25/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP FIK+GQ  +TR DL P D+  +L +L  + P      + K IE   G+++SE+
Sbjct: 63  LQDLGPIFIKFGQILSTRRDLLPEDIADELMKLQDRVPPFDSQVSVKLIEEQLGKKISEV 122

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + A
Sbjct: 123 FSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPVIAQDLAWLFILA 174

Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           + +  + A  + L   + V  +   +  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 175 RAAEKLSADARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFDGSPLLYVPQVYWD 234

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
              P VLV     G  V+           +K  LA  G       +  D+F HADMHPGN
Sbjct: 235 WCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPGN 293

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V      S         P  I +D G+   L+  D+  L     A  +RD R  A+  
Sbjct: 294 IFVSTVSPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLH 344

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V   
Sbjct: 345 IDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQPQ 401

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 402 LVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|398982821|ref|ZP_10689678.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM24]
 gi|399011586|ref|ZP_10713917.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM16]
 gi|398117734|gb|EJM07480.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM16]
 gi|398157994|gb|EJM46358.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM24]
          Length = 534

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 177/393 (45%), Gaps = 25/393 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L  L  + P      + K IE   G+++S+
Sbjct: 62  ALQDLGPIFIKFGQILSTRRDLLPEDIADELMLLQDRVPPFDSQLSIKLIEEQLGKKISD 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + 
Sbjct: 122 VFSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPIIAQDLAWLFIL 173

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ +  + A  + L   + VQ +   +  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 174 ARAAEKLSADARLLHPVDVVQDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  V+           +K  LA  G       +  D+F HADMHPG
Sbjct: 234 DWCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V      S         P  I +D G+   L+  D+  L     A  +RD R  A+ 
Sbjct: 293 NIFVSTVNPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQL 343

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V  
Sbjct: 344 HIDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQP 400

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 401 QLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|398975270|ref|ZP_10685418.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM25]
 gi|398140494|gb|EJM29456.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM25]
          Length = 534

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 176/393 (44%), Gaps = 25/393 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L  L  + P      + K IE   G+++SE
Sbjct: 62  ALQDLGPIFIKFGQILSTRRDLLPEDIADELMRLQDRVPPFDSQLSVKLIEEQLGKKISE 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + 
Sbjct: 122 VFSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPIIAQDLAWLFIL 173

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ +  + A  + L   + V  +   +  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 174 ARAAEKVSADARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  V+           +K  LA  G       +  D+F HADMHPG
Sbjct: 234 DWCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V      S         P  I +D G+   L+  D+  L     A  +RD R  A+ 
Sbjct: 293 NIFVSTVNPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQL 343

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V  
Sbjct: 344 HIDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQP 400

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 401 QLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|375311061|ref|ZP_09776319.1| ABC transporter [Paenibacillus sp. Aloe-11]
 gi|375076935|gb|EHS55185.1| ABC transporter [Paenibacillus sp. Aloe-11]
          Length = 556

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 180/404 (44%), Gaps = 31/404 (7%)

Query: 202 APFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAP 261
           AP + + G + R          LE  GPAFIK GQ A+TR DL P  + ++L +L  + P
Sbjct: 47  APESKTLGERIR--------LVLEDLGPAFIKLGQLASTRADLLPETIIRELVKLQDQVP 98

Query: 262 EHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAV 321
             S    +  +E+  G  L  I   F++ P+A+ SI QVH   L   + G+     +VA+
Sbjct: 99  PFSPEMARGILEQELGTSLEGILARFDDVPLAAASIGQVHLGKL---HSGE-----MVAI 150

Query: 322 KVRHPGVGESIRRDFVII-NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAH 380
           K++ PGV   IRRD  I+  L A  +     V+  +L + V++    ++ ++D   EA +
Sbjct: 151 KIQRPGVNRIIRRDLDILRELTAMAAKRWEWVERYQLRQMVEELGKSLIQELDYNHEARN 210

Query: 381 LSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIG 440
             +    F +   +  PK  +      +L   + +G  +    + L+    LK  LA   
Sbjct: 211 TEKIALQFEQDPHIYIPKIYWDHTSSRILTMEFLEGTHLGSREELLRRGYNLKE-LAQQL 269

Query: 441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDR 500
            +++L  + ++ F HAD HPGN+LV                  + +LD GMT  LS+  R
Sbjct: 270 VNSMLHQIFIEGFFHADPHPGNLLV-------------LKNGRLAYLDFGMTGRLSEEMR 316

Query: 501 VNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAE 560
            +L     A+ R++         RL   +   +  A   ++D+    +       V   +
Sbjct: 317 NHLASLIIALMRKNTDAMVRAIERLGLVEPATDLNALRADLDKMREDYADVPFSQVSIGD 376

Query: 561 CMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
            +  L    +RHR+ +  +V  +    L LEG    LDP  +++
Sbjct: 377 ALNDLFGAAQRHRIGLPSDVLLLGKALLTLEGVVELLDPDLSII 420


>gi|423097963|ref|ZP_17085759.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas fluorescens Q2-87]
 gi|397886833|gb|EJL03316.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas fluorescens Q2-87]
          Length = 534

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 177/393 (45%), Gaps = 25/393 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L  L  + P      +   IE   G+++SE
Sbjct: 62  ALQDLGPIFIKFGQILSTRRDLLPEDIADELMLLQDRVPPFDSKLSVALIEAQLGKKISE 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + 
Sbjct: 122 VFSRFDVEPLASASVAQVHAAQLK---SGEE-----VVVKVIRPGLKPIIAQDLAWLFIL 173

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ +  + A  + L   + VQ +   +  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 174 ARAAERLSADARLLHPVDVVQDYEKTIYDELDLLREAANASQLRRNFEGSPLLYVPQVYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  V+           +K  LA  G       +  D+F HADMHPG
Sbjct: 234 DWCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V   Q  S         P  I +D G+   L+  D+  L     A  +RD R  A+ 
Sbjct: 293 NIFVSTVQPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQL 343

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V  
Sbjct: 344 HIDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQP 400

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 401 QLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|170699196|ref|ZP_02890249.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia ambifaria IOP40-10]
 gi|170135921|gb|EDT04196.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia ambifaria IOP40-10]
          Length = 525

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 175/393 (44%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL   D   +L++L  + P    A     IE++ G  + E+
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLSVDFANELAKLQDQVPPFDSAVAIAIIEKSLGAPVDEL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           FD FE  P+AS SIAQVH   L+      K     VAVKV  P +   I  D  ++ ++A
Sbjct: 116 FDEFEREPIASASIAQVHFGKLKQGVHAGK----AVAVKVLRPNMLPVIDSDLALMRDIA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 172 TWTERMWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWD 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VLV     G  +S+ V+ L+        LA  G       +  D F HADMHPGN
Sbjct: 232 FSTSQVLVMERMTGVPISQ-VETLRTAGVDIKKLAREGVEIFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +  K   +          I LD G+   LS  D+  L + F A  +RD    A   
Sbjct: 291 IQVSLDPKTFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLH 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
           L    +     P+  +EE++ A      P  D     +   + + +L    RR  V +  
Sbjct: 342 L----ESGWVPPETRVEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 398 QLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|423349502|ref|ZP_17327158.1| hypothetical protein HMPREF9156_00696 [Scardovia wiggsiae F0424]
 gi|393702618|gb|EJD64821.1| hypothetical protein HMPREF9156_00696 [Scardovia wiggsiae F0424]
          Length = 558

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 190/397 (47%), Gaps = 30/397 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           +E  GP F+K GQ  + R ++ P + C +L++L S A    F   +KT+E  +   + ++
Sbjct: 55  MEELGPTFVKVGQILSMRSEILPEEYCAELAKLKSDADPMPFQIVRKTLEHEYNCPVGKV 114

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F   +  P+ S S+AQVHRA+L     G+      VAVKV+ PGV E++ +D  II   A
Sbjct: 115 FSYVDPQPLGSASLAQVHRATL---ITGED-----VAVKVQRPGVRETMAQDIEIIRSVA 166

Query: 344 KISSVIPAVKWLRLD--ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           + ++ + +     +D    V +      S+ D   EA +L  F      +  +  P+P  
Sbjct: 167 RTATKVASQNTQIVDFMGVVDELWDTFQSETDFMVEAKNLQEFRDFTESYAYMDCPRPYM 226

Query: 402 PLVHPAVLVETYEQGECVSRY-VDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
            L    ++V  Y +G  VS   + + +G++  +     +  +A    +L   F HAD H 
Sbjct: 227 RLCTQHIVVMDYIEGTPVSHLGLLKYEGYDPDEIGTKLVDNYA--TQVLDKGFFHADPHS 284

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI++R  Q              ++ +D+GM   ++   R  L +   AV R+D  T  +
Sbjct: 285 GNIIIRGGQ--------------IVLIDLGMVGRINGEMRSILRQMIFAVPRKDSVTLED 330

Query: 521 CTLRLSKQQNCP---NPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             LRL++        +  A + ++D   A +GT + + +  A+ +  +++   R+ + + 
Sbjct: 331 GLLRLAEVSPGALRIDRAALLSDIDLLIADFGTVDLNDLDIAKFIMSMVQLASRNNLKLP 390

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           G++ TV  + + LEG   KL P  N+MD +   +L +
Sbjct: 391 GSITTVARSMVTLEGLVNKLMPKTNMMDIITQHVLSS 427


>gi|254247239|ref|ZP_04940560.1| hypothetical protein BCPG_02026 [Burkholderia cenocepacia PC184]
 gi|124872015|gb|EAY63731.1| hypothetical protein BCPG_02026 [Burkholderia cenocepacia PC184]
          Length = 525

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 177/393 (45%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL   D   +L++L  + P    A     IE++ G  + E+
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLSVDFANELAKLQDQVPPFDSAVAIAIIEKSLGAPVDEL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           FD FE  P+AS SIAQVH A L+      K     VAVKV  P +   I  D  ++ ++A
Sbjct: 116 FDEFEREPIASASIAQVHFAKLKQGVHAGK----AVAVKVLRPNMLPVIDSDLALMRDIA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 172 TWTERMWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWD 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VLV     G  +S+ V+ L+        LA  G       +  D F HADMHPGN
Sbjct: 232 FSTSQVLVMERMTGVPISQ-VETLRSAGVDIKKLAREGVEIFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +      +          I LD G+   LS  D+  L + F A  +RD    A  T
Sbjct: 291 IQVSLDPNTFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA--T 339

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
           L L      P+ +  +EE++ A      P  D     +   + + +L    RR  V +  
Sbjct: 340 LHLESGWVPPSTR--VEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 398 QLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|399000676|ref|ZP_10703399.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM18]
 gi|398129348|gb|EJM18717.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM18]
          Length = 534

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 178/396 (44%), Gaps = 31/396 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L  L  + P      + + IE   G+++SE
Sbjct: 62  ALQDLGPIFIKFGQILSTRRDLLPEDIADELMMLQDRVPPFDSQVSVRLIEEQLGKKISE 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD----FVI 338
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D    F++
Sbjct: 122 VFSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPVIAQDLAWLFIL 173

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
              A K+S+     + L   + V  +   +  ++DL REAA+ S+   NF     +  P+
Sbjct: 174 ARAAEKLSA---DARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFDGSPLLYVPQ 230

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +    P VLV     G  V+           +K  LA  G       +  D+F HADM
Sbjct: 231 VYWDWCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADM 289

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI V   Q  S         P  I +D G+   L+  D+  L     A  +RD R  
Sbjct: 290 HPGNIFVSTVQPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRV 340

Query: 519 AECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
           A+  +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + 
Sbjct: 341 AQLHIDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNME 397

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V   +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 398 VQPQLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|169656520|ref|YP_001427862.2| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|423050142|ref|YP_007008576.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           holarctica F92]
 gi|164551588|gb|ABU60906.2| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|421950864|gb|AFX70113.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           holarctica F92]
          Length = 552

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 191/427 (44%), Gaps = 33/427 (7%)

Query: 199 IMMAPFADSFGPQFRELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELH 257
           +++ PF   +  + R L   V +R  LE  GP FIK+GQ  + R DL P D+ K++S+L 
Sbjct: 37  LLLNPFY--YSRRVRRLEHGVRIREALEKLGPIFIKFGQALSVRADLLPPDVIKEVSKLQ 94

Query: 258 SKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPI 317
              P        + IE+A  + ++EIF  FE +P+AS S+AQVH A L+           
Sbjct: 95  DNVPPFDNKIAAEQIEKAAKKPINEIFKSFESSPLASASVAQVHAAILQ--------NDD 146

Query: 318 VVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLARE 377
            V VKV  PG+ + ++ D  ++   A + S +  ++  +  E V++       ++DL RE
Sbjct: 147 KVVVKVLRPGIEKILKLDTSLMLFFATLLSKLKEIRRFKPVEIVKEINQSFFDELDLVRE 206

Query: 378 AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS--RYVDELQGHERLKSA 435
           A++ S+   NF        PK  +      V+V     G  VS    +D L    RL   
Sbjct: 207 ASNASQIRRNFEDSAIHYVPKIYWEYTSSTVMVMERVGGVRVSDIETLDALGVDRRL--- 263

Query: 436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL 495
           LA  G       +  D F HADMHPGN+ + ++           + P  I +D G+   L
Sbjct: 264 LAQRGVEIFYSQVFDDCFFHADMHPGNMFIDISNP---------ADPKYISIDFGIVGTL 314

Query: 496 SKTDRVNLVEFFKAVARRDGRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPE 552
           ++ D+  L   F A  +RD R  AE  +    +         ++ I  V E        E
Sbjct: 315 NRDDQRYLAGNFLAFFKRDYRKVAELHIESGWVPSDTRVDVLESAIRTVCEPIFEKPMKE 374

Query: 553 GDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLL 612
             L +    + QL    RR  +N+   +  +  T   +EG  +KL P  N+ +T + +L 
Sbjct: 375 ISLGY---TLMQLFAVARRFNMNIQPQLTLLQKTLFHVEGLGQKLYPELNIWETSRPILE 431

Query: 613 KADWAKS 619
           K  W K 
Sbjct: 432 K--WMKE 436


>gi|291570829|dbj|BAI93101.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 588

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 174/400 (43%), Gaps = 33/400 (8%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V  +L   GP FIK GQ  +TR DLFP +  ++LS+L  + P   +   ++ I++ FG+ 
Sbjct: 92  VRESLLDLGPTFIKLGQLFSTRADLFPGEYVEELSKLQDRVPAFPYEQCREIIDQDFGKS 151

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           + ++F  F+  P+A+ S+ QVH+A L   Y G       V VKV+ PG+ +    D  I+
Sbjct: 152 VEQLFRNFDPVPLAAASLGQVHKAQL---YSGAD-----VVVKVQRPGLKQLFEVDLAIL 203

Query: 340 NLAAKISSVIPAVKWLRLDESV---QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF 396
              A+     P  KW R  + +    +    +  ++D   E  +   F  NFR    V  
Sbjct: 204 KGIARYFQNHP--KWGRGRDWLGIYDECCRILWEEIDYLNEGRNADTFRRNFRHCDWVQV 261

Query: 397 PKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHA 456
           P+  +    P VL   Y  G  +S Y + L+     +  LA +G  A L+ LL D F HA
Sbjct: 262 PRVCWQFSSPRVLTLEYLPGIKISNY-EALEASGLDRKQLAQMGAKAYLQQLLNDGFFHA 320

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           D HPGNI V      S Q +L       IF D GM   ++   R  L+E    +A +DG 
Sbjct: 321 DPHPGNIAV------SPQGQL-------IFYDFGMMGRITSNLREKLMETLFGIANKDGD 367

Query: 517 TAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
              +  +    L+   +    +  I+ + + F      E  +   A     L E      
Sbjct: 368 RVVKSLIEVGALAPTGDMSPVRRSIQYMLDNFMDQPFEEQSI---AAISDDLYEIAYDQP 424

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
                    VM     LEG  + LDP +N M+  Q   ++
Sbjct: 425 FRFPATFTFVMRAFSTLEGVGKGLDPEFNFMEVAQPFAIQ 464


>gi|435854536|ref|YP_007315855.1| putative unusual protein kinase [Halobacteroides halobius DSM 5150]
 gi|433670947|gb|AGB41762.1| putative unusual protein kinase [Halobacteroides halobius DSM 5150]
          Length = 555

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 173/388 (44%), Gaps = 35/388 (9%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + LE  GP FIK GQ  +TRPDL PR   ++L +L  + P   F    K +E   G    
Sbjct: 65  KVLEELGPTFIKLGQLLSTRPDLLPRSYIEELEKLQEEVPPMDFEQVVKRVEEELGGSYH 124

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
             F      P+AS SI QVH+ +L     G++     V VKV+   +   +  D  I+ N
Sbjct: 125 NYFTTLSAIPLASASIGQVHQGTLN---NGEQ-----VVVKVQRVDIESKVETDLEIMKN 176

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           LA  +   +     +   E V  F+  +  ++D   EA + ++F  NF     V    PV
Sbjct: 177 LAQMLEKRLFTQALISPVEIVDNFSELIKRELDYRIEARNSTKFKKNFAEEVKVGVADPV 236

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           + L    +L   Y  G+ +        G +  +  +A I T + +K  L+D F H D HP
Sbjct: 237 WELTTRRMLTMEYIAGKKIGEL-----GSKSTREEMAKIITRSFMKQTLIDGFFHGDPHP 291

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI++    K             +  +D G+  +LS+ DR  +   F ++ R+D + A +
Sbjct: 292 GNIIITPDNK-------------LALIDFGLVGQLSRVDREAIASLFISLIRKDAQRAVK 338

Query: 521 CTLRL---SKQQNCPN-PKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
             L+L   + + NC    + F + +D+   ++G    D +     + ++L+    +++ +
Sbjct: 339 ELLKLGVVTNEINCQELQRDFYKLIDD---YYGATLSD-IELGVIINRMLDIAYSYKIKL 394

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
                 +  + + +EG   KL P  +++
Sbjct: 395 PSEFILLTKSLITIEGVVSKLAPELDIL 422


>gi|56708357|ref|YP_170253.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670827|ref|YP_667384.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134301781|ref|YP_001121749.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|254370980|ref|ZP_04986983.1| ubiquinone biosynthesis protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254875181|ref|ZP_05247891.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|385795438|ref|YP_005831844.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis NE061598]
 gi|421751566|ref|ZP_16188608.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis AS_713]
 gi|421753418|ref|ZP_16190413.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis 831]
 gi|421755951|ref|ZP_16192884.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis 80700075]
 gi|421757145|ref|ZP_16194030.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis 80700103]
 gi|421759006|ref|ZP_16195842.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis 70102010]
 gi|424674326|ref|ZP_18111247.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis 70001275]
 gi|56604849|emb|CAG45931.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110321160|emb|CAL09314.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134049558|gb|ABO46629.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|151569221|gb|EDN34875.1| ubiquinone biosynthesis protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254841180|gb|EET19616.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282159973|gb|ADA79364.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis NE061598]
 gi|409086660|gb|EKM86775.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis 80700075]
 gi|409087241|gb|EKM87343.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis AS_713]
 gi|409087265|gb|EKM87366.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis 831]
 gi|409091394|gb|EKM91393.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis 70102010]
 gi|409092874|gb|EKM92838.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis 80700103]
 gi|417435129|gb|EKT90053.1| 2-polyprenylphenol 6-hydroxylase [Francisella tularensis subsp.
           tularensis 70001275]
          Length = 552

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 191/427 (44%), Gaps = 33/427 (7%)

Query: 199 IMMAPFADSFGPQFRELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELH 257
           +++ PF   +  + R L   V +R  LE  GP FIK+GQ  + R DL P D+ K++S+L 
Sbjct: 37  LLLNPFY--YSRRVRRLEHGVRIREALEKLGPIFIKFGQALSVRADLLPPDVIKEVSKLQ 94

Query: 258 SKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPI 317
              P        + IE+A  + ++EIF  FE +P+AS S+AQVH A L+           
Sbjct: 95  DNVPLFDNKIAAEQIEKAAKKPINEIFKSFESSPLASASVAQVHAAILQ--------NDD 146

Query: 318 VVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLARE 377
            V VKV  PG+ + ++ D  ++   A + S +  ++  +  E V++       ++DL RE
Sbjct: 147 KVVVKVLRPGIEKILKLDTSLMLFFATLLSKLKEIRRFKPVEIVKEINQSFFDELDLVRE 206

Query: 378 AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS--RYVDELQGHERLKSA 435
           A++ S+   NF        PK  +      V+V     G  VS    +D L    RL   
Sbjct: 207 ASNASQIRRNFEDSAIHYVPKIYWEYTSSTVMVMERVGGVRVSDIETLDALGVDRRL--- 263

Query: 436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL 495
           LA  G       +  D F HADMHPGN+ + V+           + P  I +D G+   L
Sbjct: 264 LAQRGVEIFYSQVFDDCFFHADMHPGNMFIDVSNP---------ADPKYISIDFGIVGTL 314

Query: 496 SKTDRVNLVEFFKAVARRDGRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPE 552
           ++ D+  L   F A  +RD R  AE  +    +         ++ I  V E        E
Sbjct: 315 NRDDQRYLAGNFLAFFKRDYRKVAELHIESGWVPSDTRVDVLESAIRTVCEPIFEKPMKE 374

Query: 553 GDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLL 612
             L +    + QL    RR  +N+   +  +  T   +EG  +KL P  N+ +T + +L 
Sbjct: 375 ISLGY---TLMQLFAVARRFNMNIQPQLTLLQKTLFHVEGLGQKLCPELNIWETSRPILE 431

Query: 613 KADWAKS 619
           K  W K 
Sbjct: 432 K--WMKE 436


>gi|119493699|ref|ZP_01624307.1| hypothetical protein L8106_10257 [Lyngbya sp. PCC 8106]
 gi|119452529|gb|EAW33714.1| hypothetical protein L8106_10257 [Lyngbya sp. PCC 8106]
          Length = 592

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 174/412 (42%), Gaps = 29/412 (7%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V  T    GP FIK GQ  +TR DLFP +  ++LS+L  + P  S+  +++ IE  FG+ 
Sbjct: 96  VRETFLELGPTFIKLGQLFSTRADLFPVEYVEELSKLQDRVPAFSYEQSQEIIEHDFGKT 155

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           + ++F  F+  P+A+ S+ QVH+A LR            + VKV+ PG+ +    D  I+
Sbjct: 156 VDQLFRSFDPIPLAAASLGQVHKAQLR--------SGTEIVVKVQRPGLKKLFEIDLAIL 207

Query: 340 NLAAKISSVIPAVKWLRLDESV---QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF 396
              A+     P  KW R  + +    +    +  ++D   E  +   F  NFR    V  
Sbjct: 208 KGIARYFQNHP--KWGRGRDWLGIYDECCRILWLEIDYLNEGRNADTFRRNFRSCDWVRV 265

Query: 397 PKPVYPLVHPAVLVETYEQGECVSRY-VDELQGHERLKSALAHIGTHALLKMLLVDNFIH 455
           P+  +    P VL   Y  G  +S Y   E  G +R K  LA++G  A L  LL D F H
Sbjct: 266 PRVHWQYSSPRVLTLEYVPGIKISNYEALEASGLDRRK--LANMGAEAYLLQLLNDGFFH 323

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
           AD HPGNI V    K             +IF D GM  +++   R  L++    +A++D 
Sbjct: 324 ADPHPGNIAVSPEGK-------------LIFYDFGMMGQITSNLREKLMQTLFGIAQKDA 370

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
               +  + L       +  A    +      +     +    A     L E        
Sbjct: 371 DRVVKSLIDLGALTPTGDMGAVRRSIQYMLDHFMDKPFEEQSVAAISDDLYEIAYDQPFR 430

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYTIDGL 627
                  VM     LEG  + LDP +N M+  Q   ++     +LS T + L
Sbjct: 431 FPATFTFVMRAFSTLEGVGKGLDPDFNFMEVAQPFAMQLMSETNLSETTNSL 482


>gi|226329545|ref|ZP_03805063.1| hypothetical protein PROPEN_03454 [Proteus penneri ATCC 35198]
 gi|225202731|gb|EEG85085.1| 2-polyprenylphenol 6-hydroxylase [Proteus penneri ATCC 35198]
          Length = 410

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 145/297 (48%), Gaps = 17/297 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+T GP +IK GQ  +TR DLFP  +  +L+ L  K         ++ IE++FG  + + 
Sbjct: 61  LQTLGPVWIKLGQMLSTRRDLFPPQIADQLALLQDKVAPFDGKKARQYIEKSFGGPIDQW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           FD F+E P+AS SIAQVH A L+    G++     V +KV  P +   I+ D  ++   A
Sbjct: 121 FDDFDETPLASASIAQVHTAKLKEN--GKE-----VVLKVIRPDIQPVIKADIRLMYRLA 173

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            +   +P  + LR  E ++++   ++ +++L REAA+  +   NF     +  P+     
Sbjct: 174 NLLPFLPDGRRLRPKEVIREYEKTLLDELNLLREAANAIQLRRNFENSSMLYIPEVYSDY 233

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
            H  V+V     G  VS  ++ L   +     LA  G       +  D+F HADMHPGN+
Sbjct: 234 CHENVMVMERIYGIPVSD-IEALNAQKTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNV 292

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
            +     ++         P+ I +D G+   L+K D+  L E F A   RD R  AE
Sbjct: 293 FISYDHPEN---------PYYIGIDCGIVGSLNKEDKRYLAENFLAFFNRDYRKVAE 340


>gi|170078253|ref|YP_001734891.1| protein kinase AarF [Synechococcus sp. PCC 7002]
 gi|169885922|gb|ACA99635.1| AarF, predicted unusual protein kinase [Synechococcus sp. PCC 7002]
          Length = 542

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 181/389 (46%), Gaps = 29/389 (7%)

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGF 287
           GP ++K GQ  +TRPDL P    + L+ L +K P   +   ++TI +   + L ++F   
Sbjct: 55  GPFYVKLGQLLSTRPDLLPPKYIEALTALQAKVPTVPWFEIEQTIRQQLSQPLEDVFQEI 114

Query: 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISS 347
              P+A+GSIAQ+HRA LR    GQ      VA+KV+ PG+ + + +D  +I   A++++
Sbjct: 115 NPNPIAAGSIAQIHRAVLR---NGQ-----AVALKVQRPGIDQIVAQDIALIKGIAELAA 166

Query: 348 VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRR--WKD---VSFPKPVYP 402
           +    +   +    ++F   + +++D   EA +  +   N  +  W D   ++ P+  + 
Sbjct: 167 LTEFGQDYDVIALAKEFTKAVQAELDFRTEAGYTDQLRRNLAKSSWFDQQKLTIPEIYWE 226

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
           L    +LV  +  G+ +   ++     E+ + A+  I   A  + + VD F HAD HPGN
Sbjct: 227 LTTEKLLVMEWLDGKPL---LEAEVTSEKQRQAITTILFRAFFQQIFVDGFFHADPHPGN 283

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I    +Q              V  +D GM   L    +  L E   A+   D ++ A+ T
Sbjct: 284 IFYLDSQT-------------VALIDCGMIGRLDPRTQKLLTEMLLAIVDMDAQSCAQLT 330

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCT 582
           L LS+  +  N        D     +       ++ +E   ++L+  R ++V + GN+  
Sbjct: 331 LELSEGAHTTNLARLEANYDRLLRKYYDRSLTQLNFSEVFYEILQVARNNKVKLPGNLGL 390

Query: 583 VMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +   LEG  R  +P  N++D ++ L+
Sbjct: 391 YAKSLANLEGVARSFNPEVNLLDEIKPLI 419


>gi|77456613|ref|YP_346118.1| 2-octaprenylphenol hydroxylase [Pseudomonas fluorescens Pf0-1]
 gi|123606267|sp|Q3KJC7.1|UBIB_PSEPF RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|77380616|gb|ABA72129.1| putative ubiquinone biosynthesis-related protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 534

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 176/393 (44%), Gaps = 25/393 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L  L  + P      + K IE   G+++SE
Sbjct: 62  ALQDLGPIFIKFGQILSTRRDLLPEDIADELMRLQDRVPPFDSQLSVKLIEEQLGKKISE 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + 
Sbjct: 122 VFSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPIIAQDLAWLFIL 173

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ +  + A  + L   + V  +   +  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 174 ARAAEKVSADARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  V+           +K  LA  G       +  D+F HADMHPG
Sbjct: 234 DWCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V      S         P  I +D G+   L+  D+  L     A  +RD R  A+ 
Sbjct: 293 NIFVSTVNPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQL 343

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V  
Sbjct: 344 HIDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQP 400

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 401 QLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|402555112|ref|YP_006596383.1| ABC1 family protein [Bacillus cereus FRI-35]
 gi|401796322|gb|AFQ10181.1| ABC1 family protein [Bacillus cereus FRI-35]
          Length = 558

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 182/387 (47%), Gaps = 33/387 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK GQ A+TRPDL P D+  +L +L  K    S+   K+ IE      + +I
Sbjct: 63  LEELGPTFIKIGQIASTRPDLIPADIIHELEQLQDKVSSFSYQEVKQIIEEELDCAIEDI 122

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F+ F+E P+A+ SI QVH   L+    G++     VA+K++ P + + I  D  I+   A
Sbjct: 123 FEEFQENPLAAASIGQVHYGLLK---SGER-----VAIKIQRPNIEKIIETDLEILQHLA 174

Query: 344 KISSVIPAVKW---LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           +++ +   + W    +L + +++ +  + ++++   E  +  +  + F+   ++  PK  
Sbjct: 175 ELAEI--RLDWAARYQLRDIIEELSKSLRAELNYTIEGQNAEKVAHQFKYNPNICVPKVY 232

Query: 401 YPLVHPAVLVETYEQGECVS--RYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
           +      VL   Y +G  ++  + +D  QG  R    LA     ++L  +L++ F H D 
Sbjct: 233 WDYTTSKVLTMEYIEGIKLNELKKMDN-QGLNR--KVLAERVVQSILHQILIEGFFHGDP 289

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI             +F     ++F+D GM   LS   + +L     ++ R++ R  
Sbjct: 290 HPGNI-------------IFLPGEVIVFMDFGMVGSLSPELKQHLASLVISMMRQNTRGV 336

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDE-AFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
            +   ++    +  N K    +V+     ++  P   L    + +Q+L     +H + + 
Sbjct: 337 IKAITQMGLVPDDVNMKQLTADVEYLKQNYYDVPLSQL-SLGKAVQELFNIAYKHHIQIP 395

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVM 604
            ++  +  T L +EG   KLDP  +++
Sbjct: 396 SDITLLGKTLLTIEGLVEKLDPELSIL 422


>gi|418020319|ref|ZP_12659608.1| 2-polyprenylphenol 6-hydroxylase [Candidatus Regiella insecticola
           R5.15]
 gi|347604325|gb|EGY29002.1| 2-polyprenylphenol 6-hydroxylase [Candidatus Regiella insecticola
           R5.15]
          Length = 540

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 178/405 (43%), Gaps = 32/405 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP +IK+GQ  +TR DLF  ++  +L+ L  +      +  ++ IE A G  L+  
Sbjct: 59  LQQLGPVWIKFGQMMSTRRDLFSAEIADQLTLLQDRVAPFEGSLARQCIESAMGAPLATW 118

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           FD F++  +AS SIAQVHRA  R +  GQ+     V +KV  P +   I+ D  ++  LA
Sbjct: 119 FDDFDQQALASASIAQVHRA--RLKSNGQE-----VVLKVIRPNIRPIIKADIRLMYRLA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  ++P  + LR  E V+++   +  +++L REAA+  +   NF+    +  P+    
Sbjct: 172 KWLPKLLPDSRRLRPYEVVKEYEKTLFDELNLLREAANAIQLRRNFKNSSMLYIPEVYSD 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
           L    VLV     G  VS      Q    +K  LA  G       +  DNF HADMHPGN
Sbjct: 232 LCRENVLVMERIYGIPVSDITALEQNGTNMK-LLAERGVQVFFTQVFRDNFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V     +          P  I +D G+   L+K D+  L E F A   RD +  AE  
Sbjct: 291 IFVSYQHPQD---------PLYIGIDCGIVGALNKADKRYLAENFVAFFNRDYQRVAELH 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP------AECMQQLLEKVRRHRVNV 576
           L      +  N + F       FA     E     P         +  L    RR  + +
Sbjct: 342 LHSGWVPDDTNVEDF------EFAIRTLCEPIFAKPLAEISFGHLLLNLFNTARRFNMEI 395

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLS 621
              +  +  T L +EG  R+L P  ++  T +  L   +W +  S
Sbjct: 396 QPQLVLLQKTLLYIEGLGRQLYPKLDLWATAKPFL--ENWLREQS 438


>gi|431929516|ref|YP_007242562.1| 2-polyprenylphenol 6-hydroxylase [Thioflavicoccus mobilis 8321]
 gi|431827819|gb|AGA88932.1| 2-polyprenylphenol 6-hydroxylase [Thioflavicoccus mobilis 8321]
          Length = 553

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 174/388 (44%), Gaps = 29/388 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K+GQ  +TR DL P DL  +L++L  + P       +  IE+A+G+ +  
Sbjct: 61  VLEDLGPIFVKFGQILSTRRDLLPDDLAIELAKLQDRVPPFPGRIARTMIEKAWGQPIEN 120

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
           + D F+E P+AS SIAQVH A L+    G++     V VKV  PG+   IRRD  ++  +
Sbjct: 121 VLDAFDETPLASASIAQVHTARLK---DGRE-----VVVKVLRPGIERVIRRDVRLLYTI 172

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A          + LR  + ++++   +  ++D+ REAA+ S    NF   + +  P+  +
Sbjct: 173 AGLAQRYWKDGRRLRPVDVIREYEKTIYDELDMQREAANASLLRRNFLNSEKLYVPEVYW 232

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
            L    VLV     G  VS  V  L+        L   G       +  DNF HADMHPG
Sbjct: 233 DLTRGDVLVMERIFGTPVSD-VPALKAQGVSMQLLGERGVEIFFTQVFRDNFFHADMHPG 291

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V  + +              I +D G+   LS  D+  L E   A  +RD R  AE 
Sbjct: 292 NIFVEPSGR-------------YIAIDFGIVGTLSTEDQRYLAENLLAFFKRDYRRVAEL 338

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    + +       ++ I  V E        E    H    + +L +  RR  + +  
Sbjct: 339 HVESGWVPRHTRVEEFESAIRTVSEPIFEKPLAEISFGH---FLVRLFQVARRFDMEIQP 395

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
            +  +  T L +EG  R+L P  ++  T
Sbjct: 396 QLVLLEKTLLNIEGLGRQLYPQLDLWTT 423


>gi|319786622|ref|YP_004146097.1| 2-polyprenylphenol 6-hydroxylase [Pseudoxanthomonas suwonensis
           11-1]
 gi|317465134|gb|ADV26866.1| 2-polyprenylphenol 6-hydroxylase [Pseudoxanthomonas suwonensis
           11-1]
          Length = 560

 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 178/398 (44%), Gaps = 39/398 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP F+K GQ  ATR DL P +   +L +L +  P   F   +  +    G  
Sbjct: 63  VRRALEELGPTFVKLGQVLATRVDLLPPEWITELGKLQNSVPAVPFEQIRPQLVEDLGAD 122

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
            +E+F   EE P+A+ S+AQ +RA L             V +KVR PG+ +++  D  ++
Sbjct: 123 PAEVFARLEEKPLAAASLAQAYRAWLD--------DGTAVVLKVRRPGIRDTVEADLRLL 174

Query: 340 NLAAKI-SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             AA+I  +  P ++  R  + V +FAV +  ++D A E  +  R   NF  ++ +  PK
Sbjct: 175 ARAAEIVEARAPDLRRYRPTQVVHEFAVSLRRELDFAGEGRNAERIAANFAGYEGIVVPK 234

Query: 399 PVYPLVHPAVLVETYEQG-ECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHAD 457
             +      + V+    G         +  G +R  +ALA  G   +LKM+L D F HAD
Sbjct: 235 VHWQWTSERLNVQDLLDGIPGTDLAAVDAAGMDR--AALARTGADIVLKMVLEDGFFHAD 292

Query: 458 MHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRT 517
            HPGNI              +     +  +D GM   +S   R+ +V+    +  R+   
Sbjct: 293 PHPGNI-------------FYLPGGRIGVIDFGMVGRVSDQRRLQIVQLLHGLVAREPEA 339

Query: 518 AAECTL-------RLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVR 570
            AE  +          + +   +  AF+++      + G P  DL H    +  +   +R
Sbjct: 340 VAEVLMEWTGGSGEFDESRLQADIGAFVDQ------YRGVPLKDL-HMGLMLSDVTTILR 392

Query: 571 RHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
            H +++  ++  ++   L LEG  R+LDP +++    Q
Sbjct: 393 EHGLSLPPDLALMVKAFLTLEGMGRQLDPDFDMASAAQ 430


>gi|406939345|gb|EKD72384.1| hypothetical protein ACD_45C00688G0003 [uncultured bacterium]
          Length = 544

 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 179/391 (45%), Gaps = 29/391 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE  GP FIK GQ  +TR DL P D+ ++L++L  K P  S    KK +E +    + 
Sbjct: 60  RALEDLGPIFIKAGQILSTRRDLLPDDIAEELAKLQDKVPPFSGVLAKKMVEESLNAPIK 119

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
            IF  F+   +AS SIAQVH A+L        +    V VKV  PG+ + I RD  ++  
Sbjct: 120 SIFQEFDLTALASASIAQVHAATL--------LTGDSVVVKVLRPGIKKMIDRDLSLLTT 171

Query: 342 AAKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
            AK +    A  +  +  E V++ A  +  ++DL RE A+ S+   NF     +  P+  
Sbjct: 172 LAKFADRYWADARRFKPVEMVEEIAHTLHDELDLQREGANASQLRRNFHHSDLLYIPEIY 231

Query: 401 YPLVHPAVLVETYEQGECVSRY-VDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
           +      +LV   E+ E +S Y +  L+        LA  G       +  D+F HADMH
Sbjct: 232 WSFSRANILV--MERIEGISIYNIAMLKASGINMKKLAERGIEIFFTQVFRDSFFHADMH 289

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGNI +       S K L   +P  I +D G+   L+  D+  L E   A  +RD +  A
Sbjct: 290 PGNIFI-------SLKNL--DEPQYIAVDFGIVGSLNTKDQRYLAENMLAFFKRDYQRVA 340

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTP--EGDL--VHPAECMQQLLEKVRRHRVN 575
           E    L       +P   I++ + A      P  E  L  +   + + +L +  RR  +N
Sbjct: 341 E----LHVSSGWLSPATRIDQFEGAIRAVCEPIFERPLKEISFGQLLLRLFQTARRFNMN 396

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           +   +  +  T L +EG  R++ P  ++  T
Sbjct: 397 IQPQLILLQKTLLNIEGVGRQIYPELDLWAT 427


>gi|161523750|ref|YP_001578762.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           multivorans ATCC 17616]
 gi|189351489|ref|YP_001947117.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           multivorans ATCC 17616]
 gi|221200069|ref|ZP_03573112.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia multivorans CGD2M]
 gi|221206778|ref|ZP_03579790.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia multivorans CGD2]
 gi|221211251|ref|ZP_03584230.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia multivorans CGD1]
 gi|421476404|ref|ZP_15924290.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia multivorans CF2]
 gi|160341179|gb|ABX14265.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia multivorans ATCC
           17616]
 gi|189335511|dbj|BAG44581.1| ubiquinone biosynthesis protein [Burkholderia multivorans ATCC
           17616]
 gi|221168612|gb|EEE01080.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia multivorans CGD1]
 gi|221173433|gb|EEE05868.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia multivorans CGD2]
 gi|221180308|gb|EEE12712.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia multivorans CGD2M]
 gi|400228350|gb|EJO58289.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia multivorans CF2]
          Length = 525

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 175/393 (44%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL   D   +L++L  + P    +     IE++ G  + E+
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLSVDFANELAKLQDQVPPFDSSVAIAIIEKSLGAPVDEL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           FD FE  PVAS SIAQVH A L+      K     VAVKV  P +   I  D  ++ ++A
Sbjct: 116 FDEFEREPVASASIAQVHFAKLKQGVHAGK----AVAVKVLRPNMLPVIDSDLALMRDIA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 172 TWTERMWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWD 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VLV     G  +S+ V+ L+        LA  G       +  D F HADMHPGN
Sbjct: 232 FSTSHVLVMERMSGVPISQ-VETLRAAGVDIKKLAREGVEIFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +      +          I LD G+   LS  D+  L + F A  +RD    A   
Sbjct: 291 IQVSLDPNTFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLH 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
           L    +     P+  +EE++ A      P  D     +   + + +L    RR  V +  
Sbjct: 342 L----ESGWVPPETRVEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 398 QLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|421468879|ref|ZP_15917386.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia multivorans ATCC
           BAA-247]
 gi|400230998|gb|EJO60727.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia multivorans ATCC
           BAA-247]
          Length = 527

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 175/393 (44%), Gaps = 23/393 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL   D   +L++L  + P    +     IE++ G  + E+
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLSVDFANELAKLQDQVPPFDSSVAIAIIEKSLGAPVDEL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           FD FE  PVAS SIAQVH A L+      K     VAVKV  P +   I  D  ++ ++A
Sbjct: 116 FDEFEREPVASASIAQVHFAKLKQGVHAGK----AVAVKVLRPNMLPVIDSDLALMRDIA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 172 TWTERMWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWD 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VLV     G  +S+ V+ L+        LA  G       +  D F HADMHPGN
Sbjct: 232 FSTSHVLVMERMSGVPISQ-VETLRAAGVDIKKLAREGVEIFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +      +          I LD G+   LS  D+  L + F A  +RD    A   
Sbjct: 291 IQVSLDPNTFGR---------YIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLH 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
           L    +     P+  +EE++ A      P  D     +   + + +L    RR  V +  
Sbjct: 342 L----ESGWVPPETRVEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 398 QLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|28198931|ref|NP_779245.1| ubiquinone biosynthesis protein UbiB [Xylella fastidiosa Temecula1]
 gi|182681640|ref|YP_001829800.1| putative ubiquinone biosynthesis protein UbiB [Xylella fastidiosa
           M23]
 gi|386085130|ref|YP_006001412.1| putative ubiquinone biosynthesis protein UbiB [Xylella fastidiosa
           subsp. fastidiosa GB514]
 gi|417558469|ref|ZP_12209443.1| putative ubiquinone biosynthesis protein AarF [Xylella fastidiosa
           EB92.1]
 gi|31077016|sp|Q87CN1.1|UBIB_XYLFT RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|226695749|sp|B2I583.1|UBIB_XYLF2 RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|28057029|gb|AAO28894.1| ubiquinone biosynthesis protein [Xylella fastidiosa Temecula1]
 gi|182631750|gb|ACB92526.1| 2-polyprenylphenol 6-hydroxylase [Xylella fastidiosa M23]
 gi|307580077|gb|ADN64046.1| putative ubiquinone biosynthesis protein UbiB [Xylella fastidiosa
           subsp. fastidiosa GB514]
 gi|338178958|gb|EGO81929.1| putative ubiquinone biosynthesis protein AarF [Xylella fastidiosa
           EB92.1]
          Length = 552

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 186/424 (43%), Gaps = 37/424 (8%)

Query: 187 RALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFP 246
           R L L   F P I       S G + R          L+  GP F+K+GQ  +TR DL P
Sbjct: 30  RWLRLAKPFVPRISAEIVEQSRGRRLR--------LALQELGPIFVKFGQILSTRRDLVP 81

Query: 247 RDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLR 306
           +D+  +L  L  +         +  IE A G+ +   F  F+  P+AS SI+QVH A+L 
Sbjct: 82  QDIGDELVMLQDRVEPFEGQTARSIIETALGKSVESAFAHFDTVPLASASISQVHAATLH 141

Query: 307 FRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLAAKISSVIPAVKWLRLDESVQQFA 365
            R          V VKV  P +   I  D  ++ +LA  +    P    +R  E V +  
Sbjct: 142 DRR--------AVVVKVLRPDIEHQISDDIALLKSLATLVEHTHPNADKIRPREIVAEIE 193

Query: 366 VFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECV-SRYVD 424
             + +++DL RE A+ S     +    D+  P+ ++   H A  V T E+   + S  + 
Sbjct: 194 TTLAAELDLQREGANASVLRRFWEASDDIYVPEVIWS--HTAERVLTLERMYGIPSDDIA 251

Query: 425 ELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV 484
            L      + AL+  G       +  DNF HAD H GNI V      S   R  +S P  
Sbjct: 252 LLDASGIDRKALSSKGIRVFYTQVFRDNFFHADAHSGNIWV-----DSDPAR--KSNPRF 304

Query: 485 IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEA 544
           I LD G+  +LS+ D+  L E F A+  +D R  AE    L  +     P   IEE++ A
Sbjct: 305 IVLDFGIMGQLSQKDQYYLAENFMAIFHKDYRRIAE----LHVEAGWIPPHVRIEELEAA 360

Query: 545 F-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDP 599
                  ++  P    +  AE M +L    RR+++ +   +  +  T L +EG  R+LDP
Sbjct: 361 ARSVCEPYFTRPLSQ-ISLAEVMMKLFHVARRYQLTLQPQLILLQKTLLNIEGVGRQLDP 419

Query: 600 GYNV 603
             ++
Sbjct: 420 ELDI 423


>gi|187931326|ref|YP_001891310.1| 2-octaprenylphenol hydroxylase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187712235|gb|ACD30532.1| 2-octaprenylphenol hydroxylase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 552

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 191/427 (44%), Gaps = 33/427 (7%)

Query: 199 IMMAPFADSFGPQFRELWLHVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELH 257
           +++ PF   +  + R L   V +R  LE  GP FIK+GQ  + R DL P D+ K++S+L 
Sbjct: 37  LLLNPFY--YSRRVRRLEHGVRIREALEKLGPIFIKFGQALSVRADLLPPDVIKEVSKLQ 94

Query: 258 SKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPI 317
              P        + IE+A  + ++EIF  FE +P+AS S+AQVH A L+           
Sbjct: 95  DNVPLFDNKIAAEQIEKAAKKPINEIFKSFESSPLASASVAQVHAAILQ--------NDD 146

Query: 318 VVAVKVRHPGVGESIRRDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLARE 377
            V VKV  PG+ + ++ D  ++   A + S +  ++  +  E V++       ++DL RE
Sbjct: 147 KVVVKVLRPGIEKILKLDTSLMLFFATLLSKLKEIRRFKPVEIVKEINQSFFDELDLVRE 206

Query: 378 AAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECVS--RYVDELQGHERLKSA 435
           A++ S+   NF        PK  +      V+V     G  VS    +D L    RL   
Sbjct: 207 ASNASQIRRNFEDSAIHYVPKIYWEYTSSTVIVMERVGGVRVSDIETLDALGVDRRL--- 263

Query: 436 LAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAEL 495
           LA  G       +  D F HADMHPGN+ + V+           + P  I +D G+   L
Sbjct: 264 LAQRGVEIFYSQVFDDCFFHADMHPGNMFIDVSNP---------ADPKYISIDFGIVGTL 314

Query: 496 SKTDRVNLVEFFKAVARRDGRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPE 552
           ++ D+  L   F A  +RD R  AE  +    +         ++ I  V E        E
Sbjct: 315 NRDDQRYLAGNFLAFFKRDYRKVAELHIESGWVPSDTRVDVLESAIRTVCEPIFEKPMKE 374

Query: 553 GDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLL 612
             L +    + QL    RR  +N+   +  +  T   +EG  +KL P  N+ +T + +L 
Sbjct: 375 ISLGY---TLMQLFAVARRFNMNIQPQLTLLQKTLFHVEGLGQKLCPELNIWETSRPILE 431

Query: 613 KADWAKS 619
           K  W K 
Sbjct: 432 K--WMKE 436


>gi|311103720|ref|YP_003976573.1| 2-polyprenylphenol 6-hydroxylase [Achromobacter xylosoxidans A8]
 gi|310758409|gb|ADP13858.1| 2-polyprenylphenol 6-hydroxylase [Achromobacter xylosoxidans A8]
          Length = 517

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 182/403 (45%), Gaps = 43/403 (10%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL P D+  +L+ L  + P    A     IE A G    ++
Sbjct: 57  LESLGPIFVKFGQVLSTRRDLIPADIADELALLQDRVPPFPSAQAAACIETALGAPPEKL 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  FE  PVAS SIAQVH A L   + G++     VAVKV  PG+   I +D  ++ + A
Sbjct: 117 FAQFEVDPVASASIAQVHFAVL---HDGRE-----VAVKVLRPGMLSIIEKDLSLLKVVA 168

Query: 344 KISSVIPAV-KWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF----RRWKDVSFPK 398
           +I   + A  + L+  E V +F  ++  ++DL REA++ S+   NF     R   +  P+
Sbjct: 169 RIIERLGADGRRLKPREVVAEFDKYLHDELDLVREASNCSQLRRNFGPESGRGDMLIVPE 228

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSA------LAHIGTHALLKMLLVDN 452
            ++      V       G  V +        ER++ A      LA  G       +  D 
Sbjct: 229 VIWEYTASTVFTMQRMYGMPVGQV-------ERMRQAGIDIPTLARTGVEIFFTQVFTDG 281

Query: 453 FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR 512
           F HADMHPGNI V      S +     S    I LD G+   LS+ D+  L + F A   
Sbjct: 282 FFHADMHPGNIYV------SDRPDTLGS---YIALDFGIVGSLSEFDKNYLAQNFLAFFH 332

Query: 513 RDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEK 568
           RD R  A+    L  +     P    EE++ A      P  D     +   + + +L + 
Sbjct: 333 RDYRRVAQ----LHIESGWVPPDTREEELEGAVRAVCEPYFDRPLSEISLGQVLLRLFQT 388

Query: 569 VRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            RR  V +   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 389 SRRFNVEIQPQLVLLQKTLLNVEGLGRQLDPNLDLWKTAKPYL 431


>gi|52549550|gb|AAU83399.1| ubiquinone biosynthesis protein [uncultured archaeon GZfos27G5]
          Length = 575

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 183/409 (44%), Gaps = 40/409 (9%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TRPD+ P++L  +L +L  + P  S    K+ IE   G  +  I
Sbjct: 74  LEELGPTFVKFGQIMSTRPDMLPQELIIELEKLQDRVPPFSTEDAKRIIEDELGSSVGRI 133

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           F  F ++PVAS SIAQVH+A L    PG +     VA+KV+ PG+   I  D  ++++LA
Sbjct: 134 FKDFTDSPVASASIAQVHKAVL----PGGE----EVAIKVQRPGIDRIIEVDLEIMLHLA 185

Query: 343 AKISSVIPAVKWLRLDES--VQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
             I         + LD    V +FA  +  + D   EAA++ RF  NF+    +  P   
Sbjct: 186 TLIEKHFKEELGI-LDPVGIVDEFARVIRKEQDFRIEAANIERFATNFQADMTIHVPHVY 244

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLK-------SALAHIGTHALLKMLLVDNF 453
                  VL   +  G  +S         +            +A  G + +LK +    F
Sbjct: 245 REYSSDKVLTMEFIGGLKISEITKAKAKAKVQAQNYGIDPKVVAARGANLVLKQIFEHGF 304

Query: 454 IHADMHPGNILVRVAQKKSSQKRLFRSKPHVI-FLDVGMTAELSKTDRVNLVEFFKAVAR 512
            HAD HPGNI V               K +VI FLD GM   LS   R +L +   A+  
Sbjct: 305 FHADPHPGNIKV--------------LKDNVICFLDYGMMGSLSARHREDLADILIAIID 350

Query: 513 RDGRTAAECTLRLSKQQNCPNPKAF---IEEVDEAFAFWGTPEGDLVHPAECMQQLLEKV 569
           +D        L+LS+ +   + +     I E+ E +A+    E ++ H    + ++   V
Sbjct: 351 KDETKITRTILKLSRYRQIEDSEKLESDIAELIELYAYRPLKELEIGH---LLHRIASVV 407

Query: 570 RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAK 618
             +++    N   +    + +EG  ++LDP +N +   +    K  W++
Sbjct: 408 VEYQLKAPRNFYLLAKALVTIEGVGKELDPEFNAVSHAEPFAEKIIWSR 456


>gi|410863223|ref|YP_006978457.1| protein kinase [Alteromonas macleodii AltDE1]
 gi|410820485|gb|AFV87102.1| protein kinase [Alteromonas macleodii AltDE1]
          Length = 542

 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 177/401 (44%), Gaps = 27/401 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSE 282
           L+  GP FIK+GQ  +TR DL P  +  +L+ L  K P  S    +  I +A G + L+E
Sbjct: 58  LQNLGPVFIKFGQMLSTRRDLLPPAIANELARLQDKVPPFSSDAAQDIIRQALGLKDLNE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
           +F  FE +P+AS SIAQVH A L             V VKV  P + ++I  D  ++ +L
Sbjct: 118 LFSEFETSPLASASIAQVHAAKLIHNNED-------VVVKVLRPDIRDTIVADMELLFSL 170

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +   +P  K LR  E V ++   ++ ++DL RE+A+  +   NF     +  PK   
Sbjct: 171 ANVLQRWLPDGKRLRPVEVVVEYRKTIVDELDLLRESANGIQLGRNFEGSDALYVPKIYS 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VLV     G  +S  +D L         LA  G       +  D+F HADMHPG
Sbjct: 231 DYCRSNVLVMERIYGLPISN-IDALLTQNTNMKKLAERGVEVFFTQVFRDSFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V     ++         P  I +D G+   L++ D+  L E F A   RD R  A+ 
Sbjct: 290 NIFVSTEHPEN---------PKYIAIDFGIVGTLNREDKRYLAENFIAFFNRDYRKVAQL 340

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
                 + +  N    +  I  V E    +  P  ++      + QL    RR  + V  
Sbjct: 341 HADSGWVPQDTNIDEFEMAIRTVCE--PIFQKPLAEISF-GNVLMQLFNTARRFNMVVQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
            +  +  T L +EG  R+L P  ++  T +  L   +W K 
Sbjct: 398 QLVLLQKTLLYIEGLGRQLYPQLDLWKTAKPFL--ENWMKE 436


>gi|381396007|ref|ZP_09921699.1| probable ubiquinone biosynthesis protein ubiB [Glaciecola punicea
           DSM 14233 = ACAM 611]
 gi|379328187|dbj|GAB56832.1| probable ubiquinone biosynthesis protein ubiB [Glaciecola punicea
           DSM 14233 = ACAM 611]
          Length = 542

 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 181/401 (45%), Gaps = 27/401 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSE 282
           L+  GP F+K+GQ  +TR DL P ++  +L+ L  K P       K+ I +A   + L+E
Sbjct: 58  LQELGPVFVKFGQMLSTRRDLLPDEMVTELTRLQDKVPPFDSNEAKEIIRKALDLKDLNE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
           +F  FE  P+AS S+AQVH A L+    G       V VKV  P + ++I  D  ++I++
Sbjct: 118 LFSEFEHVPLASASVAQVHSAKLK----GDNKD---VVVKVLRPNIKQTIEADVDLLISI 170

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +   +P  K LR  E V+++   ++ ++DL REAA+  +   +F+    +  P    
Sbjct: 171 AQLVQDWLPNGKRLRPVEVVKEYKRTILDELDLLREAANAIQVRRSFKNSDSLYVPYVYS 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 V+V     G  VS  +D L+        LA  G       +  D+F HADMHPG
Sbjct: 231 EHCRINVIVMERIYGIPVSE-IDTLRAQNTNLKVLAERGVEVFFTQVFRDSFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V     ++         P  I +D G+   L+K D+  L E F A   R+ R  AE 
Sbjct: 290 NIFVSFEHPEN---------PKYIGIDYGIVGTLNKQDKRYLAENFIAFFNRNYRKVAEL 340

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +    +  + +  I  V E    +  P  ++      + QL    +R  + V  
Sbjct: 341 HIDSGWVPADTDIDDFEMAIRTVCE--PIFQKPLAEISF-GNVLLQLFTTAQRFNMTVQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
            +  +  T L +EG  R L P  ++  T +  L K  W K 
Sbjct: 398 QLVLLQKTLLYVEGLGRTLYPQLDLWKTAKPFLEK--WMKD 436


>gi|452127182|ref|ZP_21939765.1| ubiquinone biosynthesis protein UbiB [Bordetella holmesii F627]
 gi|452130554|ref|ZP_21943126.1| ubiquinone biosynthesis protein UbiB [Bordetella holmesii H558]
 gi|451920479|gb|EMD70625.1| ubiquinone biosynthesis protein UbiB [Bordetella holmesii H558]
 gi|451922277|gb|EMD72422.1| ubiquinone biosynthesis protein UbiB [Bordetella holmesii F627]
          Length = 517

 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 186/399 (46%), Gaps = 31/399 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE+ GP F+K+GQ  +TR DL P D+  +L+ L  + P    A    +IE A G   +
Sbjct: 55  RALESLGPIFVKFGQVLSTRRDLIPADIANELALLQDRVPPFPSAQAAASIEAALGAPPT 114

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           ++F  FE  PVAS SIAQVH A +   + G++     VAVKV  PG+ + I +D  ++ +
Sbjct: 115 QLFAQFETDPVASASIAQVHFAVM---HDGRE-----VAVKVLRPGMRDVIEKDMALLRI 166

Query: 342 AAKISSVI-PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF----RRWKDVSF 396
            A+I   + P  + L+  E V +F  ++  ++DL REA++ S+   NF     R   +  
Sbjct: 167 VARIIERLGPDGRRLKPREVVAEFDNYLHDELDLVREASNCSQLRRNFGPESGRGDVLIV 226

Query: 397 PKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHA 456
           P+ ++      V       G  V + +D L+        LA  G       +  D F HA
Sbjct: 227 PEVIWEFTASTVFTMERMYGVPVGQ-IDRLRAAGIDIPTLARSGVEIFFTQVFADGFFHA 285

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNI   V+   ++  R        I LD G+   LS+ D+  L + F A  RRD R
Sbjct: 286 DMHPGNIY--VSDNPATLGR-------YIALDFGIVGSLSEFDKNYLAQNFLAFFRRDYR 336

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRH 572
             A+    L  +          EE++ A      P  D     +   + + +L +  RR 
Sbjct: 337 RVAQ----LHIESGWVPADTREEELEGAVRAVCEPYFDRPLAEISLGQVLLRLFQTSRRF 392

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            V +   +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 393 NVEIQPQLVLLQKTLLNVEGLGRQLDPNLDLWKTAKPYL 431


>gi|158520664|ref|YP_001528534.1| hypothetical protein Dole_0647 [Desulfococcus oleovorans Hxd3]
 gi|158509490|gb|ABW66457.1| ABC-1 domain protein [Desulfococcus oleovorans Hxd3]
          Length = 565

 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 175/398 (43%), Gaps = 29/398 (7%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  G  FIK GQ  +T+P L P DL  +L+ L    P   F    + +    GR ++ +F
Sbjct: 74  EELGSTFIKLGQVMSTQPGLIPIDLVNELTRLQDNVPASPFDAISEVLREDLGRPVNVVF 133

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLAA 343
              ++ P+AS SIAQV+ A L     G++     VAVKVR PG+ +++  D  +++ LA 
Sbjct: 134 ASIDKTPIASASIAQVYSAVL---LTGER-----VAVKVRRPGIKKTVEADLEIMMYLAG 185

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
            +   I      R  + V++FA  +  ++D   EA ++ RF   F   + +  P+     
Sbjct: 186 LMERNIEEFAPHRPVQIVEEFARALERELDFTIEATNIERFKRQFSGDETIHVPRVFREY 245

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
               VLV  +  G  +S  V  L+     K  L   GT   LK +    F HAD HPGNI
Sbjct: 246 TTGRVLVMEHIDGIKISD-VARLEAEGYDKKLLTKRGTDVTLKQVFNHGFFHADPHPGNI 304

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
            V                  +  LD G+   ++   R   V+   A+  ++     +  L
Sbjct: 305 FVLPGNV-------------ICPLDFGLVGNVALKHREMFVDLLDALVHQNVSDTTDVLL 351

Query: 524 RLSKQQNCPNPKAFIEEVDEAFA---FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
           +L+   + PN  A   +V E      +    E DL      +  LLE + RHR+ +  NV
Sbjct: 352 KLAIWDDEPNRLALERDVAEFIGQHLYKPLKEMDL---GSLLHHLLEMLTRHRLRIPPNV 408

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAK 618
             ++     +EG  R+LDP ++++      L +   A+
Sbjct: 409 FLMIKAIATVEGIARRLDPDFDIITHATPFLRRVKLAR 446


>gi|284006540|emb|CBA71801.1| probable ubiquinone biosynthesis protein [Arsenophonus nasoniae]
          Length = 566

 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 174/397 (43%), Gaps = 25/397 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP +IK+GQ  +TR DLFP  +  +L+ L  K         ++ IE++ G  L  
Sbjct: 81  ALQDLGPVWIKFGQMLSTRRDLFPTIISDQLALLQDKVASFDGQLARQHIEQSLGGSLET 140

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
            FD F+E P+AS SIAQVH A L+     Q  K IV  +KV  P +   I+ D  ++   
Sbjct: 141 WFDDFDEVPLASASIAQVHTAKLK-----QNNKQIV--IKVIRPDILPIIKADIGLMYRL 193

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           A    ++P  + LR  E V+++   ++ +++L REAA+  +   NF     +  P+    
Sbjct: 194 ANWIPLLPDGRRLRPREVVREYEKTLIDELNLLREAANTIQLRRNFENSSMLYIPEVYSD 253

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                V+V     G  VS  +D L+        LA  G       +  D+F HADMHPGN
Sbjct: 254 YCRENVMVMERIYGIPVSD-IDALKKQGINMKLLAERGVKVFFTQVFRDSFFHADMHPGN 312

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I +          R     P  I +D G+   L+K D+  L E F A   RD R  AE  
Sbjct: 313 IFI---------SREHPQDPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELH 363

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +    N  + +  I  V E        E    H    +  L    RR  + V   
Sbjct: 364 VDSGWVPADTNVEDFEFAIRTVCEPIFEKPLAEISFGH---VLFNLFNTARRFNMEVQPQ 420

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADW 616
           +  +  T L +EG  R+L P  ++  T +  L   DW
Sbjct: 421 LVLLQKTLLYIEGLGRQLYPQLDLWKTAKPFL--EDW 455


>gi|254429911|ref|ZP_05043618.1| ABC1 family protein [Alcanivorax sp. DG881]
 gi|196196080|gb|EDX91039.1| ABC1 family protein [Alcanivorax sp. DG881]
          Length = 541

 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 181/392 (46%), Gaps = 28/392 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            +E  GP F+K GQ  ATR D+FP D   +  +L  +A    F   K  IE + G+ +  
Sbjct: 53  AMEEMGPTFVKLGQVLATRVDMFPMDWIAEFEKLQDQAQAVPFDTLKADIELSLGKPVDN 112

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F   +  P+   SI QVH A  R    GQK     V +KV+ PG+ + I  D  +++  
Sbjct: 113 LFARIDPEPIGVASIGQVHSALTRR---GQK-----VVLKVQKPGIRDKIDSDLRLLDQL 164

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AK+++     ++  R  E V++F   +  ++D   E  +  R   N R++K +  PK  +
Sbjct: 165 AKLAADNSVELRRYRPVELVREFKRSLTRELDFTIEGRNADRIRKNLRQFKWLQIPKVYW 224

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
            L  P V V+ + +G   ++ V+ L      +  +A  G  A  KM L D F HAD HPG
Sbjct: 225 DLSSPTVQVQQHVEG-IPAKAVERLNEAGLDRELIARRGALAAWKMALEDGFFHADPHPG 283

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           N ++    +             +  LD GM  +LS + R  +++  +AV  R+   A +C
Sbjct: 284 NFIIMPGNR-------------IAMLDFGMVGKLSHSRREQILQITRAVVLRE---AEQC 327

Query: 522 TLRLSKQQNCPNPK--AFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
              LS   +    K    + +V++  + +       +  +  +  +   VR H + +  +
Sbjct: 328 AGVLSGWSDGQPIKFDQLVSDVEDVISQYHGVSISQLDISALLNDITALVRNHNLVLPSD 387

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +   +   + LEG+ R L+P +++M   + LL
Sbjct: 388 IALFIKAIITLEGFGRLLNPHFDLMSEAEPLL 419


>gi|119512840|ref|ZP_01631907.1| hypothetical protein N9414_02461 [Nodularia spumigena CCY9414]
 gi|119462513|gb|EAW43483.1| hypothetical protein N9414_02461 [Nodularia spumigena CCY9414]
          Length = 562

 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 168/392 (42%), Gaps = 27/392 (6%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           +  TL   GP FIK GQ  +TR D+FP +  ++L++L  K P  S+   + +IE   G++
Sbjct: 67  IRNTLLELGPTFIKVGQLFSTRADIFPGEYVEELAKLQDKVPAFSYEQVEASIEEELGKK 126

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           + E+F  FE  P+A+ S+ QVH+A L   + G++     V VK++ PG+ +    D  I+
Sbjct: 127 IPELFHNFEAIPLAAASLGQVHKAVL---HTGEE-----VVVKIQRPGLKKLFEIDLQIL 178

Query: 340 NLAAKISSVIPAVKWLRLDESV---QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF 396
               +     P  KW R  + +   ++    +  ++D   E  +   F  NFR ++ V  
Sbjct: 179 KGITRYFQNHP--KWGRGRDWLGIYEECCRILWEEIDYLNEGRNADTFRRNFRGYEWVKV 236

Query: 397 PKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHA 456
           P+  +    P +L   Y  G  +S+Y + L+     +  LA +G  A L  LL + F HA
Sbjct: 237 PRVYWRYASPKILTLEYVPGIKISQY-EALEAAGLDRKLLARLGAQAYLLQLLNNGFFHA 295

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           D HPGNI V                  +IF D GM  ++    R  L+E    +A++DG 
Sbjct: 296 DPHPGNIAV-------------SPNGDLIFYDFGMMGQIQSNVREGLMETLFGIAQKDGD 342

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
              +  + L       +       V      +     +    A     L E         
Sbjct: 343 RVVQSLIDLGAIAPTEDMGPVRRSVQYMLDHFMDQPFENQSVAAISDDLYELAYNQPFRF 402

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
                 VM     LEG  + LDP +N M+  Q
Sbjct: 403 PATFTFVMRAFSTLEGVGKGLDPDFNFMEVAQ 434


>gi|410461490|ref|ZP_11315140.1| ABC transporter [Bacillus azotoformans LMG 9581]
 gi|409925777|gb|EKN62979.1| ABC transporter [Bacillus azotoformans LMG 9581]
          Length = 557

 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 31/386 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP FIK GQ A+TR DL P ++ ++L +L        F   ++ IE   G  L  +
Sbjct: 62  LQGLGPTFIKLGQIASTRRDLIPEEITRELEQLQDNVVSFPFEQVREIIEGELGDTLENL 121

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F  F E P+A+ SI QVH A L     G++     VAVK++ P +   +  D  I+ +LA
Sbjct: 122 FQDFSETPLATASIGQVHSAHLN---TGEQ-----VAVKIQRPDIVPIVETDLEILDDLA 173

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             + S I   K   + + +  FA  + +++D   E  +  R    F    ++  P   + 
Sbjct: 174 RGMESKIAWAKTYEIRKMINTFAKTLRAELDYYIEGRNCERIAKQFSYQPEIEIPHVHWK 233

Query: 403 LVHPAVLVETYEQGECVSRYVD-ELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                VL   + QG  VS     E +G++R    +A   T ++L+ + ++ F H D HPG
Sbjct: 234 YTTKKVLTMDFVQGIKVSNIAKLEAEGYDR--RLIADRITQSMLQQIFIEGFFHGDPHPG 291

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR--RDGRTAA 519
           NI V    +             + +LD GM   L+   + +       + R   DG   A
Sbjct: 292 NIYVLPENR-------------IAYLDFGMVGRLNDDTKFHFASMIIHLQRGNTDGLIKA 338

Query: 520 ECTL-RLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
             ++  LSK+ +     +F  E+D+    +       +  +E +  LL  +  HR+ +  
Sbjct: 339 ISSMGMLSKETDMT---SFYNEIDQLVMKYYDVSFSKLQLSEAINDLLTVIYHHRIQIPS 395

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVM 604
           ++  +  T +VLE     LDP +++M
Sbjct: 396 DLTVLAKTLIVLEAIIENLDPEFSIM 421


>gi|329894777|ref|ZP_08270578.1| Ubiquinone biosynthesis monooxygenase UbiB [gamma proteobacterium
           IMCC3088]
 gi|328922766|gb|EGG30099.1| Ubiquinone biosynthesis monooxygenase UbiB [gamma proteobacterium
           IMCC3088]
          Length = 529

 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 179/394 (45%), Gaps = 29/394 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL P D+  +L++L  + P  S    ++ IE   G  ++ +
Sbjct: 59  LESLGPVFVKFGQALSTRRDLLPLDIADELAKLQDQVPPFSNELAREIIETELGDSVNNL 118

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-LA 342
           F  F+  P+AS S+AQVH+A LR    G+      V VKV  P +  +I  D   +  LA
Sbjct: 119 FAEFQAEPLASASVAQVHKAKLR---TGES-----VVVKVIRPDIEATIIEDTRWMAWLA 170

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             I+ + P    L+  + V  +   ++ +++LAREAA+ S+   NF     +  P+  + 
Sbjct: 171 RWITRLHPDGHRLKAQDVVADYTATILDELNLAREAANASQLRRNFENSDQLYVPQVYWD 230

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                V       G  V+    +L+  +     LA  G       +L D+F HADMHPGN
Sbjct: 231 YTTSRVYTMEEVTGIPVNNRA-QLEALDVNFKCLAERGVEIFFTQVLRDSFFHADMHPGN 289

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           IL+      +         P  I LD  +   LS  D+  L     ++ +RD RT AE  
Sbjct: 290 ILIDANNPNT---------PSYIALDCAIIGSLSADDQYYLARNLLSIFKRDYRTVAE-- 338

Query: 523 LRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             L  +     P   +++ + A        +  P  +L    + +  L +   R  + + 
Sbjct: 339 --LHVECGWVPPHTRVQDFESAIRTVCEPVFEKPIAELSF-GQLLLNLFQTASRFDMPIQ 395

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            ++  +  T L +EG  R+L P  N+ DT Q  L
Sbjct: 396 PSLVLLQKTLLNIEGLGRELYPQLNLWDTAQPFL 429


>gi|269137507|ref|YP_003294207.1| ubiquinone biosynthesis protein UbiB [Edwardsiella tarda EIB202]
 gi|387866268|ref|YP_005697737.1| Ubiquinone biosynthesis monooxygenase UbiB [Edwardsiella tarda
           FL6-60]
 gi|267983167|gb|ACY82996.1| putative ubiquinone biosynthesis protein UbiB [Edwardsiella tarda
           EIB202]
 gi|304557581|gb|ADM40245.1| Ubiquinone biosynthesis monooxygenase UbiB [Edwardsiella tarda
           FL6-60]
          Length = 543

 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 174/393 (44%), Gaps = 26/393 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+T GP +IK+GQ  +TR DLF   +  +L+ L  +      A  ++ IE A G  L + 
Sbjct: 61  LQTLGPVWIKFGQMLSTRRDLFAPAIADQLALLQDRVAPFDGALARRQIEAALGGPLEQW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           FD F+   +AS SIAQVH A+LR    G++     V +KV  P +   IR D  ++  LA
Sbjct: 121 FDDFDSQALASASIAQVHTATLREN--GRE-----VVLKVIRPDIQPIIRADVRLMYRLA 173

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  ++P  + LR  E V+++   ++ +++L REAA+  +   NF     +  P+    
Sbjct: 174 GWVPKLLPDGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFDASPMLYVPEVFSD 233

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
               +VLV     G  VS  +  L+        LA  G       +  D+F HADMHPGN
Sbjct: 234 YCRESVLVMERIYGVPVSD-IAALRAQNTNMKLLAERGVQVFFTQVFRDSFFHADMHPGN 292

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V     +          P  I +D G+   L+K D+  L E F A   RD R  AE  
Sbjct: 293 IFVSYEHPQD---------PQYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRKVAE-- 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTP----EGDLVHPAECMQQLLEKVRRHRVNVDG 578
             L        P   +EE + A      P      D +     +  L    RR  + V  
Sbjct: 342 --LHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLDQISFGHVLLNLFNTARRFNMEVQP 399

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++  T +  L
Sbjct: 400 QLVLLQKTLLYVEGLGRQLYPQLDLWTTAKPFL 432


>gi|152980033|ref|YP_001354798.1| ubiquinone biosynthesis protein [Janthinobacterium sp. Marseille]
 gi|151280110|gb|ABR88520.1| ubiquinone biosynthesis protein [Janthinobacterium sp. Marseille]
          Length = 521

 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 177/395 (44%), Gaps = 27/395 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE  GP F+K+GQ  +TR DL P D+  +L+ L  + P  S       I ++ G    
Sbjct: 56  RALEDLGPIFVKFGQVLSTRRDLMPIDIADELARLQDRVPPFSSELAIAQIIKSLGAHPD 115

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN- 340
            +F  F+  PVAS SIAQVH   L+            VA+KV  PG+ +SI  D  +++ 
Sbjct: 116 VLFAEFDPVPVASASIAQVHFGRLK--------NGTAVAIKVLRPGIKKSIDEDVALMHI 167

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           LA  +  +    K L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  
Sbjct: 168 LAGLVERMWADGKRLKPKEVVAEFDKYLHDELDLMREAANGSQLRRNFADSNLLVVPEMF 227

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +     +V+V     G  +S+    +     LK  L+  G       +  D F HADMHP
Sbjct: 228 WDYCSTSVIVMERMVGIPISQTDRLIAAGVDLKK-LSRDGVEIFFTQVFRDGFFHADMHP 286

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V V      +          I LD G+   L+  D+  L + F A  RRD +  AE
Sbjct: 287 GNIQVSVEPATFGR---------YIALDFGIVGTLNDFDKDYLSQNFLAFFRRDYKRVAE 337

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNV 576
             +    +      +  ++E++ A      P  D     +   + + +L +  RR  V V
Sbjct: 338 AHI----ESGWAPKETRVDELESAVRACCEPIFDRPLSEISFGQVLLRLFQTSRRFNVEV 393

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 394 QPQLVLLQKTLLNVEGLGRQLDPELDLWKTAKPYL 428


>gi|163854789|ref|YP_001629087.1| ubiquinone biosynthesis protein UbiB [Bordetella petrii DSM 12804]
 gi|163258517|emb|CAP40816.1| probable ubiquinone biosynthesis protein [Bordetella petrii]
          Length = 575

 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 192/415 (46%), Gaps = 34/415 (8%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           R LE+ GP F+K+GQ  +TR DL P D+  +L+ L  + P    A     IE A G   +
Sbjct: 113 RALESLGPIFVKFGQVLSTRRDLVPADIADELALLQDRVPPFPSAQAAACIEAALGAPPA 172

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           ++F  F+  PVAS SIAQVH A L   + G++     VAVKV  PG+ ++I RD  ++ +
Sbjct: 173 QLFAQFDVDPVASASIAQVHFAVL---HDGRE-----VAVKVLRPGMRQAIERDLSLLRI 224

Query: 342 AAKI-SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFR----RWKDVSF 396
            A+I     P  + L+  E V +F  ++  ++DL REA++ S+   NF     R   +  
Sbjct: 225 VARIVERTGPDGRRLKPREVVAEFDNYLHDELDLVREASNCSQLRRNFDAASGRGDLLIV 284

Query: 397 PKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHA 456
           P+ ++      V       G  V + +D L+        LA  G       +  D F HA
Sbjct: 285 PEVIWEYTTSTVFTMQRMYGIPVGQ-IDRLRAAGIDIPTLARSGVDIFFTQVFSDGFFHA 343

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGNI   V+ +  +  R        I LD G+   LS+ D+  L + F A   RD R
Sbjct: 344 DMHPGNIY--VSDRPETLGR-------YIALDFGIVGSLSEFDKNYLAQNFLAFFHRDYR 394

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRH 572
             A+    L  +     P    EE++ A      P  D     +   + + +L +  RR 
Sbjct: 395 RVAQ----LHIESGWVPPDTREEELEGAVRAVCEPYFDRPLAEISLGQVLLRLFQTSRRF 450

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSYTIDGL 627
            V +   +  +  T L +EG  R+LDP  ++  T +  L   +W +     +DGL
Sbjct: 451 NVEIQPQLVLLQKTLLNVEGLGRQLDPNLDLWKTAKPYL--ENWMRQ-RMGLDGL 502


>gi|134296926|ref|YP_001120661.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           vietnamiensis G4]
 gi|387903238|ref|YP_006333577.1| Ubiquinone biosynthesis monooxygenase UbiB [Burkholderia sp. KJ006]
 gi|134140083|gb|ABO55826.1| 2-octaprenylphenol hydroxylase [Burkholderia vietnamiensis G4]
 gi|387578130|gb|AFJ86846.1| Ubiquinone biosynthesis monooxygenase UbiB [Burkholderia sp. KJ006]
          Length = 525

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 173/388 (44%), Gaps = 23/388 (5%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL   D   +L++L  + P    A     IE++ G  + E+
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLSVDFANELAKLQDQVPPFDSAVAIAIIEKSLGAPVDEL 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           FD FE  PVAS SIAQVH A L+      K     VA+KV  P +   I  D  ++ ++A
Sbjct: 116 FDEFEREPVASASIAQVHFAKLKQGVHAGK----AVAIKVLRPNMLPVIDSDLALMRDIA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                +    + L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 172 TWAERMWADGRRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMFWD 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                VLV     G  +S+ V+ L+        LA  G       +  D F HADMHPGN
Sbjct: 232 FSTSQVLVMERMTGVPISQ-VETLRSAGVDIKKLAREGVEIFFTQVFRDGFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +      +          + LD G+   LS  D+  L + F A  +RD    A   
Sbjct: 291 IQVSLDPNTFGR---------YVALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVATLH 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVDG 578
           L    +     P+  +EE++ A      P  D     +   + + +L    RR  V +  
Sbjct: 342 L----ESGWVPPETRVEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
            +  +  T L +EG  R LDP  ++  T
Sbjct: 398 QLVLLQKTMLNVEGLGRSLDPELDLWKT 425


>gi|425446370|ref|ZP_18826375.1| Similar to tr|Q8Z0A9|Q8Z0A9 [Microcystis aeruginosa PCC 9443]
 gi|389733428|emb|CCI02805.1| Similar to tr|Q8Z0A9|Q8Z0A9 [Microcystis aeruginosa PCC 9443]
          Length = 549

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 190/407 (46%), Gaps = 38/407 (9%)

Query: 218 HVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG 277
            V+ + L   GP ++K GQ  +TRPDL P +  + L+ L ++ P  ++   +  I     
Sbjct: 44  EVLKKILVELGPFYVKLGQLLSTRPDLLPANYIEALTALQAQVPPVAWTDIEIVITEQLA 103

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
           + + ++F      P+A+GSI Q+HRA+L     G++     VA+KV  PG+ + + +D  
Sbjct: 104 KPIEQVFKYINTQPIAAGSIGQIHRATL---LSGEE-----VAIKVLRPGIEKIVAQDSA 155

Query: 338 IINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF--RRW---K 392
           +I   A + ++    +   +    ++F   + +++D  +E  +  +  YN    RW   K
Sbjct: 156 LIKGIADLVALTEFGQSYDVVNLAEEFIKAVNAELDFTQEGHYTDQLRYNLTQSRWSEPK 215

Query: 393 DVSFPKPVYPLVHPAVLVETYEQGEC-----VSRYVDELQGHERLKSALAHIGTHALLKM 447
            +  PK  + L +  +LV  + +G+      VSR   E Q   + KS +  I   +  + 
Sbjct: 216 QLVIPKIYWHLTNSKILVLEWLEGKQILEADVSRPATE-QAISQRKSEITRILFRSFFQQ 274

Query: 448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF 507
           + +D F HAD HPGNI              +     V  +D GM   L    +  L E  
Sbjct: 275 IYIDGFFHADPHPGNI-------------FYLDDGRVALIDCGMVGRLDPQTQQILTELL 321

Query: 508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIE-EVD--EAFAFWGTPEGDLVHPAECMQQ 564
            A+   D +  ++ T++LS+      P   ++ EVD       +     + ++ +E + +
Sbjct: 322 LAIVDLDAKRCSQLTIKLSE---SVVPITLVQLEVDYERMLRKYYNLNLNQINFSEVVYE 378

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           LL+  RR+R+ + GN+     +   LEG  RK +P  N+++ ++ LL
Sbjct: 379 LLQVARRNRIKLPGNLGLFAKSLANLEGTARKFNPDINILEEVKPLL 425


>gi|197303908|ref|ZP_03168942.1| hypothetical protein RUMLAC_02646 [Ruminococcus lactaris ATCC
           29176]
 gi|197297023|gb|EDY31589.1| ABC1 family protein [Ruminococcus lactaris ATCC 29176]
          Length = 524

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 196/407 (48%), Gaps = 40/407 (9%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK GQ  +   D+ P+  C +L +L S      F+  ++ IE ++G    E+
Sbjct: 35  LEDLGPTFIKIGQIMSLHSDVLPKKYCDELMKLRSDVAPMPFSEVEEVIEDSYGYPWQEV 94

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F   E+  + S SIAQVHRA+L+    G++     V VKV+  G+ +++ RD  +++ A 
Sbjct: 95  FSQIEKETLGSASIAQVHRATLK---TGEE-----VVVKVQRKGIYDTMARDIGLLHKAV 146

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
           K+   I   + +     + +  V    +++   EAA++  F    RR KD+++ +   P+
Sbjct: 147 KLVPPISIKETIDFSMVLDELWVVTQEEMNFLTEAANMEEFA---RRNKDIAYVRT--PV 201

Query: 404 VHPA-----VLVETYEQGECVSRYVDELQGHERLKSALAHIGTHAL---LKMLLVDNFIH 455
           ++       VLV  Y +G      +DE +  E+    L  IGT  +   +K ++ D F H
Sbjct: 202 LYKEFTTHHVLVMEYIEGYP----IDEKEVLEKEGYDLEEIGTKLVDHYIKQVMDDGFFH 257

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
           AD HPGN+ +              S   ++++D+GM   LS  DR  + +  + +A  D 
Sbjct: 258 ADPHPGNVHI--------------SDGKIVWIDMGMMGRLSDRDRELISDAIQGIAINDI 303

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
               +  L L + +  P+     E++      +G  +   +  AE MQ L+E ++ +R++
Sbjct: 304 GMIQDAVLALGEFRGKPDQSKLYEDISSLMIKYGKLDMGNIDVAEAMQDLMEVMKTNRIS 363

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSY 622
           +   +  +      +EG   ++ P  N+++ + +  +K D+ ++ ++
Sbjct: 364 MPHGLTMLARGLTQMEGVLAEICPQINMVE-IASARIKGDFLRNFNW 409


>gi|254490671|ref|ZP_05103856.1| 2-polyprenylphenol 6-hydroxylase [Methylophaga thiooxidans DMS010]
 gi|224464127|gb|EEF80391.1| 2-polyprenylphenol 6-hydroxylase [Methylophaga thiooxydans DMS010]
          Length = 554

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 179/400 (44%), Gaps = 27/400 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP F+K+GQ  +TR DL P D+   L++L  K         +  IE+A+   L  I
Sbjct: 61  LQDLGPIFVKFGQVLSTRRDLLPGDIADSLAKLQDKVAPFPAEQARALIEQAYDEPLDTI 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           F   E  P+AS SIAQVH A+L        +    V +K+  PG+   I+RD  ++  LA
Sbjct: 121 FAQIEHQPLASASIAQVHAATL--------IDGDEVVIKLVRPGIEPLIKRDIDLLYTLA 172

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           +         K LR  E V +    +  ++D+ REA+  S+   NF     +  PK  + 
Sbjct: 173 SFAERYWSEGKRLRPREIVAELEKNLFDELDMLREASSASQLQRNFEGTTLLYVPKVYWN 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
           L  P++LV+    G  +S  +  L+  +   + LA IG       +   +F HADMHPGN
Sbjct: 233 LTKPSLLVQERIYGAPISD-IAGLKAKQVNLARLAEIGVEIFFTQVFKHSFFHADMHPGN 291

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I+V +    +         P  I +D G+   LS  D+  L E F A    D R  AE  
Sbjct: 292 IMVDIEDPDN---------PRYIAVDFGIMGTLSPDDQRYLAENFLAFFNHDYRRVAELH 342

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           ++   +         +A I  V E    +  P  D+    + + +L +  RR  + V   
Sbjct: 343 IQSGWVPANTRLDEFEAAIRSVCE--PIFARPLKDISF-GQLLLRLFQTARRFNMEVQPQ 399

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           +  +  T L +EG  R L P  ++  + + +L   +W K 
Sbjct: 400 LVLLQKTLLNIEGLGRDLYPELDLWQSAKPIL--ENWMKE 437


>gi|152988980|ref|YP_001351123.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas aeruginosa PA7]
 gi|452879275|ref|ZP_21956399.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas aeruginosa VRFPA01]
 gi|167011566|sp|A6VDI8.1|UBIB_PSEA7 RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|150964138|gb|ABR86163.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas aeruginosa PA7]
 gi|452184145|gb|EME11163.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas aeruginosa VRFPA01]
          Length = 533

 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 182/400 (45%), Gaps = 39/400 (9%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L+ L  K P        K IE   G ++ +
Sbjct: 63  ALQDLGPIFIKFGQILSTRRDLLPDDIANELAWLQDKVPPFPPELAVKRIEEQLGAKIEQ 122

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD----FVI 338
           +F  FE  P+AS S+AQVH A L+    G++     V VKV  P +   IR D    F++
Sbjct: 123 VFARFEREPLASASVAQVHAARLK---SGEE-----VVVKVIRPNLEPVIRSDIAWLFIL 174

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA ++SS     + L   E V  +   ++ ++DL REAA+ S+   NF     +  P+
Sbjct: 175 ARLAERVSS---EARRLHPVEVVSDYEKTIVDELDLLREAANASQLRRNFEGSPLLYVPQ 231

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +    P VLV     G  V+  ++ L+       ALA  G       +  D+F HADM
Sbjct: 232 VYWDWCRPKVLVMERIYGIPVTD-LETLRDQRTDFKALAERGVEIFFTQVFRDSFFHADM 290

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDR----VNLVEFFKAVARRD 514
           HPGNI V      S         P  I +D G+   L+  D+     NL+ FFK    RD
Sbjct: 291 HPGNIFVSTRAPWS---------PQYIAVDCGIVGSLTDEDQDYLARNLIAFFK----RD 337

Query: 515 GRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRR 571
            R  A+  +    +  +    + +A I  V E    +  P  D+    + + +L +  RR
Sbjct: 338 YRKVAQLHIDSGWVPAETKVNDFEAAIRTVCE--PIFEKPLKDISF-GQVLLRLFQTARR 394

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             + +   +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 395 FNMEIQPQLVLLQKTLLNIEGLGRQLYPELDLWATAQPFL 434


>gi|238918118|ref|YP_002931632.1| 2-polyprenylphenol 6-hydroxylase, putative [Edwardsiella ictaluri
           93-146]
 gi|259550875|sp|C5BCA6.1|UBIB_EDWI9 RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|238867686|gb|ACR67397.1| 2-polyprenylphenol 6-hydroxylase, putative [Edwardsiella ictaluri
           93-146]
          Length = 543

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 174/393 (44%), Gaps = 26/393 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+T GP +IK+GQ  +TR DLF   +  +L+ L  +      A  ++ IE + G  L + 
Sbjct: 61  LQTLGPVWIKFGQMLSTRRDLFAPAIADQLALLQDRVAPFDGALARRQIEASLGGPLEQW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           FD F+   +AS SIAQVH A+LR    G++     V +KV  P +   IR D  ++  LA
Sbjct: 121 FDDFDSQALASASIAQVHTATLREN--GRE-----VVLKVIRPDIQPIIRADVRLMYRLA 173

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  ++P  + LR  E V+++   ++ +++L REAA+  +   NF     +  P+    
Sbjct: 174 GWVPKLLPDGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFDASPMLYIPEVFSD 233

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
               +VLV     G  VS  +  L+        LA  G       +  D+F HADMHPGN
Sbjct: 234 YCRESVLVMERIYGVPVSD-IAALRAQNTNMKLLAERGVQVFFTQVFRDSFFHADMHPGN 292

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V     +          P  I +D G+   L+K D+  L E F A   RD R  AE  
Sbjct: 293 IFVSYEHPQD---------PQYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRKVAE-- 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTP----EGDLVHPAECMQQLLEKVRRHRVNVDG 578
             L        P   IEE + A      P      D +     +  L    RR  + V  
Sbjct: 342 --LHVDSGWVPPDTNIEEFEFAIRTVCEPIFEKPLDQISFGHVLLNLFNTARRFNMEVQP 399

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++  T +  L
Sbjct: 400 QLVLLQKTLLYVEGLGRQLYPQLDLWTTAKPFL 432


>gi|116053212|ref|YP_793534.1| ubiquinone biosynthesis protein UbiB [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|355643283|ref|ZP_09053193.1| ubiquinone biosynthesis protein ubiB [Pseudomonas sp. 2_1_26]
 gi|392986742|ref|YP_006485329.1| ubiquinone biosynthesis protein UbiB [Pseudomonas aeruginosa DK2]
 gi|419751690|ref|ZP_14278100.1| ubiquinone biosynthesis protein UbiB [Pseudomonas aeruginosa
           PADK2_CF510]
 gi|421177320|ref|ZP_15634975.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa CI27]
 gi|122256772|sp|Q02EV2.1|UBIB_PSEAB RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|115588433|gb|ABJ14448.1| ubiquinone biosynthesis protein UbiB [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|354829788|gb|EHF13850.1| ubiquinone biosynthesis protein ubiB [Pseudomonas sp. 2_1_26]
 gi|384401766|gb|EIE48119.1| ubiquinone biosynthesis protein UbiB [Pseudomonas aeruginosa
           PADK2_CF510]
 gi|392322247|gb|AFM67627.1| ubiquinone biosynthesis protein UbiB [Pseudomonas aeruginosa DK2]
 gi|404529670|gb|EKA39696.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa CI27]
          Length = 533

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 182/400 (45%), Gaps = 39/400 (9%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L+ L  K P        K IE   G ++ +
Sbjct: 63  ALQDLGPIFIKFGQILSTRRDLLPDDIANELAWLQDKVPPFPPELAVKRIEEQLGAKIEQ 122

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD----FVI 338
           +F  FE  P+AS S+AQVH A L+    G++     V VKV  P +   IR D    F++
Sbjct: 123 VFARFEREPLASASVAQVHAARLK---SGEE-----VVVKVIRPNLEPVIRSDIAWLFIL 174

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA ++SS     + L   E V  +   ++ ++DL REAA+ S+   NF     +  P+
Sbjct: 175 ARLAERVSS---EARRLHPVEVVSDYEKTIVDELDLLREAANASQLRRNFEGSPLLYVPQ 231

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +    P VLV     G  V+  ++ L+       ALA  G       +  D+F HADM
Sbjct: 232 VYWDWCRPKVLVMERIYGIPVTD-LETLRDQRTDFKALAERGVEIFFTQVFRDSFFHADM 290

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDR----VNLVEFFKAVARRD 514
           HPGNI V      S         P  I +D G+   L+  D+     NL+ FFK    RD
Sbjct: 291 HPGNIFVSTRAPWS---------PQYIAVDCGIVGSLTDEDQDYLARNLIAFFK----RD 337

Query: 515 GRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRR 571
            R  A+  +    +  +    + +A I  V E    +  P  D+    + + +L +  RR
Sbjct: 338 YRKVAQLHIDSGWVPAETKVNDFEAAIRTVCE--PIFEKPLKDISF-GQVLLRLFQTARR 394

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             + +   +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 395 FNMEIQPQLVLLQKTLLNIEGLGRQLYPELDLWATAQPFL 434


>gi|428306679|ref|YP_007143504.1| 2-octaprenylphenol hydroxylase [Crinalium epipsammum PCC 9333]
 gi|428248214|gb|AFZ13994.1| 2-octaprenylphenol hydroxylase [Crinalium epipsammum PCC 9333]
          Length = 551

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/406 (24%), Positives = 185/406 (45%), Gaps = 36/406 (8%)

Query: 218 HVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG 277
            V+   L   GP +IK GQ  +TRPDL P    + L  L  + P  ++   +  I     
Sbjct: 45  QVLKNILVELGPVYIKLGQLLSTRPDLLPPPYIEALITLQDEVPPVAWEAIETVITSQLR 104

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
           + ++EIF       VA+GSIAQ HRA+L     G++      A+K++ PG+  +I +D  
Sbjct: 105 KPIAEIFAIIHPKAVAAGSIAQTHRATL---LDGRE-----AALKIQRPGIDRTIEQDIR 156

Query: 338 IINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRR--WKD-- 393
           ++   A++ +     ++  L   V +FAV + ++++  +EA++      N  +  W D  
Sbjct: 157 VLRGLARLVNRTEVGRYYNLVSIVDEFAVTLRAELNFTQEASYTDLLRGNLSKSYWFDPQ 216

Query: 394 -VSFPKPVYPLVHPAVLVETYEQGECV-------SRYVDELQGHERLKSALAHIGTHALL 445
            ++ P+  + L    ++V  + +G  +        +Y        R   A+A +   A  
Sbjct: 217 KLTLPEIYWDLTTEKLMVMQWLEGVPLLNANFSGVKYGGNANAERR---AIAELLIRAYF 273

Query: 446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE 505
           +   +D   HAD HPGN+              +     V  LD GM   L    +  L+E
Sbjct: 274 QQFYIDGVFHADPHPGNL-------------FYLESGQVALLDCGMMGRLDPRTQQILIE 320

Query: 506 FFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQL 565
           F  A+A  DG+  ++ TL L++  N  N      + D     +       ++ ++ + ++
Sbjct: 321 FLLAIANLDGKRCSQLTLELAESTNPVNLSYLENDFDRLLRRYYNLSIAEINFSQVIFEV 380

Query: 566 LEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           L+  R+H++ +  N+     T   LEG  R+LDP +N+++ ++ ++
Sbjct: 381 LQTARKHKIRLPSNMGLYSKTIANLEGVARQLDPEFNLIEQIKPMM 426


>gi|428320065|ref|YP_007117947.1| ABC-1 domain-containing protein [Oscillatoria nigro-viridis PCC
           7112]
 gi|428243745|gb|AFZ09531.1| ABC-1 domain-containing protein [Oscillatoria nigro-viridis PCC
           7112]
          Length = 558

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 175/409 (42%), Gaps = 41/409 (10%)

Query: 210 PQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTK 269
           P  R +  H ++ TL   GP FIK GQ  +TR DL P +  K+L +L  + PE S     
Sbjct: 48  PHTRRIRAHWLVNTLLNLGPTFIKIGQSLSTRADLLPLEYVKELEQLQDRVPEFSSEEAI 107

Query: 270 KTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVG 329
             +E   G+ +  ++  F+ +P+A+ S+ QVH+A L   + G+      V VKV+ PG+ 
Sbjct: 108 ALVESELGKDIYALYRDFDPSPIAAASLGQVHKARL---HTGED-----VIVKVQRPGLE 159

Query: 330 ESIRRDFVIINLAAKISS-VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF 388
                D   +    +     +P  +   L+    +F   +  ++D  +E  +  RF +NF
Sbjct: 160 SLFDLDVKAVRQVMRFCDRYLPGTRKYDLESIYHEFFKILYQEIDYVQEGKNSDRFSHNF 219

Query: 389 RRWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVD-ELQGHERLKSALAHIGTHALLKM 447
           R +  V  PK  +      VL   Y  G  V   +  E  G + +K  L  +G    LK 
Sbjct: 220 REYPQVIVPKVYWQYTTKKVLTIEYAPGIKVDDRISLEAIGVDIVK--LNQLGICCYLKQ 277

Query: 448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF 507
           LL+D F  AD HPGN+ V                  +IF D GM AE+    +  +V+ F
Sbjct: 278 LLIDGFFQADPHPGNLAV-------------TEDGSLIFYDFGMMAEVKSLAKDQMVKTF 324

Query: 508 KAVARRDGRTAAECTLRLSKQQNCPNPK------AFIEE--VDEAFAFWGTPEGDLVHPA 559
            AV R+D        +++   +  P+        AF+ +  +D+   F            
Sbjct: 325 FAVMRKDTDEVINTLIKIGLVEPMPDMMPVRRLIAFLLDKFIDKPIDFQAF--------N 376

Query: 560 ECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
           E   +L     +    +   +  ++ +   L+G  R LDP YN + + Q
Sbjct: 377 EIKNELYIMFEQQPFRLPAEMMFIIKSVTTLDGIARTLDPDYNFLASAQ 425


>gi|254238228|ref|ZP_04931551.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa C3719]
 gi|126170159|gb|EAZ55670.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa C3719]
          Length = 533

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 182/400 (45%), Gaps = 39/400 (9%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L+ L  K P        K IE   G ++ +
Sbjct: 63  ALQDLGPIFIKFGQILSTRRDLLPDDIANELAWLQDKVPPFPPELAVKRIEEQLGAKIEQ 122

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD----FVI 338
           +F  FE  P+AS S+AQVH A L+    G++     V VKV  P +   IR D    F++
Sbjct: 123 VFARFEREPLASASVAQVHAARLK---SGEE-----VVVKVIRPNLEPVIRSDIAWLFIL 174

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA ++SS     + L   E V  +   ++ ++DL REAA+ S+   NF     +  P+
Sbjct: 175 ARLAERVSS---EARRLHPVEVVSDYEKTIVDELDLLREAANASQLRRNFEGSPLLYVPQ 231

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +    P VLV     G  V+  ++ L+       ALA  G       +  D+F HADM
Sbjct: 232 VYWDWCRPKVLVMERIYGLPVTD-LETLRDQRTDFKALAERGVEIFFTQVFRDSFFHADM 290

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDR----VNLVEFFKAVARRD 514
           HPGNI V      S         P  I +D G+   L+  D+     NL+ FFK    RD
Sbjct: 291 HPGNIFVSTRAPWS---------PQYIAVDCGIVGSLTDEDQDYLARNLIAFFK----RD 337

Query: 515 GRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRR 571
            R  A+  +    +  +    + +A I  V E    +  P  D+    + + +L +  RR
Sbjct: 338 YRKVAQLHIDSGWVPAETKVNDFEAAIRTVCE--PIFEKPLKDISF-GQVLLRLFQTARR 394

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             + +   +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 395 FNMEIQPQLVLLQKTLLNIEGLGRQLYPELDLWATAQPFL 434


>gi|32490869|ref|NP_871123.1| hypothetical protein WGLp120 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166075|dbj|BAC24266.1| yigR [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 538

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 187/404 (46%), Gaps = 27/404 (6%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           ++  +E  GP +IK+GQ  +TR D+F +D+ K+L  L ++          + IE +   +
Sbjct: 55  LILAIEKLGPIWIKFGQMLSTRNDIFKKDIIKQLQNLQNEVTPFDSKIAIRCIENSMNNK 114

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           + +IF+ F ++P+AS SIAQV+ A L+    G++     V VKV  PG+ + I+ D  ++
Sbjct: 115 IEKIFNNFNKSPIASASIAQVYTAKLK---NGKR-----VVVKVIRPGIIKKIKSDIKLM 166

Query: 340 NLAAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
            + AK +S +    K LRL + + ++   ++++ +L  EA H  +   NF+    +  PK
Sbjct: 167 LVLAKFLSKIFKYGKNLRLIDIIIEYKKIILNETNLLYEAVHTIQLRRNFKESNMLYIPK 226

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
                 +  V++     G  +S   D  + +  +K  LA  G       +  DNF H DM
Sbjct: 227 VYINYCNENVMISEKINGIKISNIFDLKKNNVNMK-LLAERGVKIFFTQVFRDNFFHGDM 285

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI V                P  I +D  +   L+K D+  L E F A   RD R  
Sbjct: 286 HPGNIFVSYENP---------DDPKYIGIDCSIIGRLTKLDKYFLAENFVAFFNRDYRKI 336

Query: 519 AECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
           A+  +    + K+ N  + ++ I  V E    +     D ++  + +       +  ++N
Sbjct: 337 AKLHIDSGWVDKKTNVNDLESSIRVVCE--PIFEKSLSD-IYFGKILLAFFSSTKDFKIN 393

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           +   +  +  T   +EG  ++L P  N+  T +  L   +W K+
Sbjct: 394 IQPQLILLQKTLFYIEGIGKQLYPELNLWKTAKPFL--ENWIKN 435


>gi|219682681|ref|YP_002469064.1| ABC1 family protein kinase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|219620331|gb|ACL28488.1| ABC1 family protein kinase [Bifidobacterium animalis subsp. lactis
           AD011]
          Length = 606

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 185/399 (46%), Gaps = 53/399 (13%)

Query: 225 ETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIF 284
           E  GP F+K GQ  + R ++ P   C +LS+L + A    +A    T+E  + R + EIF
Sbjct: 108 EALGPTFVKVGQILSMRSEILPESFCAELSKLRADADPMPYAIVLGTLENEYQRPIDEIF 167

Query: 285 DGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLAA 343
           +  +  P+ S S+AQVHRA+L+    G+      VAVKV+ PGV E++ +D  I+ +LA 
Sbjct: 168 EHIDTTPLGSASLAQVHRATLK---TGED-----VAVKVQRPGVRETMAQDVSIMRSLAK 219

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
             + ++ + + +     V++       + +   EA +L+ F      +  +  P P   L
Sbjct: 220 GATKIMHSSQVVDFRGVVEELWETFDEETNFLNEARNLAEFKRFCSHYAYMDCPTPFTDL 279

Query: 404 VHPAVLVETYEQGECVSRYVDEL--QGHERLKSALAHIGTHALLKMLLVDN--------- 452
               VLV  Y  G  +S +  EL   G+     +L  IGT       LVDN         
Sbjct: 280 CTEHVLVMQYIDGIPIS-HTRELIDDGY-----SLNEIGTK------LVDNYAAQILDAG 327

Query: 453 FIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVAR 512
           F HAD HPGNI +R  +              +I LD+GMT  L    RV L +   AVA+
Sbjct: 328 FFHADPHPGNIEIRGGK--------------IILLDLGMTGRLDARTRVALKQMLFAVAK 373

Query: 513 RDGRTAAECTLRLS----KQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEK 568
           ++    A+  LR +    ++ + P+    ++ + E F      + DL   A  +  L + 
Sbjct: 374 QNSADLADALLRFAGTDVERADYPSLLGDLDGIVEEFGTVDLADLDL---AAFITSLTQM 430

Query: 569 VRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
            RRH + +  +V TV    + LEG   +  P  N+++ +
Sbjct: 431 ARRHGIEIPSSVTTVGRALVTLEGLLDEFIPNVNMIEII 469


>gi|406831710|ref|ZP_11091304.1| ABC transporter [Schlesneria paludicola DSM 18645]
          Length = 555

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 172/388 (44%), Gaps = 25/388 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           TLE  GP FIK+GQ  +TRPDL P ++  +L +L    P          IE   GR + E
Sbjct: 67  TLEKLGPTFIKFGQVMSTRPDLVPEEMLVELQKLQEGVPPFPSEDAVAQIESELGRSVDE 126

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
           +F  F+  P+A+GS+ QVHRA     + G +     +AVK+R P     + RD +++  L
Sbjct: 127 LFASFDRKPLAAGSLGQVHRA---VHFNGTQ-----LAVKIRRPTAVRDVERDLLLMQEL 178

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +   +   +       V  FA  +  +++ AREA  +  F   FR    +  P+  +
Sbjct: 179 AVLLERNVAEAQIFDPVGLVNHFARSIRRELNFAREARTMDEFRRLFRDDPTLYVPQVFW 238

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
            L   AVL   +     +   +D++     + S +A  G    +K +      H D HPG
Sbjct: 239 DLTTDAVLTMEFLDALKLDE-IDQIPPDITVPSKIAASGARIFMKQVFEFGVFHGDPHPG 297

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           N+ V             R    +  LD GM   L +  R  LV+   A++R+D   A + 
Sbjct: 298 NLRV-------------RRDGTICLLDYGMIGILDERTREQLVDLLLAISRKDVDNAVKQ 344

Query: 522 TLRLSKQ-QNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
            L++ +  +    P   I+  D    ++G  E + +H    +   +  +  H +   G++
Sbjct: 345 VLQIGESYREVDRPLLQIDMRDFVANYYGI-ELERLHVGRLLSDFVAILSNHGIRCPGSL 403

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
             ++   + LEG  R LDP +N+   LQ
Sbjct: 404 MLLIRCFVTLEGVGRTLDPEFNLAAHLQ 431


>gi|358448612|ref|ZP_09159114.1| 2-polyprenylphenol 6-hydroxylase [Marinobacter manganoxydans
           MnI7-9]
 gi|357227174|gb|EHJ05637.1| 2-polyprenylphenol 6-hydroxylase [Marinobacter manganoxydans
           MnI7-9]
          Length = 547

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 171/394 (43%), Gaps = 29/394 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P D+ + L  L  + P       +  IE + G  +S++
Sbjct: 59  LEELGPVFVKFGQILSTRRDLLPDDMAESLKNLQDRVPPFPSNEARSIIETSLGAPVSDL 118

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL-A 342
           F  F   P+AS S+AQVH A+LR    GQK     V VKV  PG+ + IR+D  ++ L A
Sbjct: 119 FAEFSPDPLASASVAQVHAATLR---NGQK-----VVVKVLRPGIEKVIRQDLALMYLMA 170

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +       K L   E V  +   +  ++DL REAA+ S+   NF     +  P   + 
Sbjct: 171 GLLEKYWSEGKRLHPVEVVADYDSTIHDELDLQREAANASQLRRNFENSSLIYIPFIDWD 230

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
               +VLV     G  ++     L+        LA  G       +  D+F HADMHPGN
Sbjct: 231 YTRKSVLVMERIHGIPIADTA-ALKAAGVDMKVLAEKGVEIFFTQVFRDSFFHADMHPGN 289

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V  +           + P  I +D G+   L+  D+  L     A  RRD R  A+  
Sbjct: 290 IFVDTSNP---------ADPRYIAIDFGIVGTLAPDDQSYLARNLLAFFRRDYRQVAQ-- 338

Query: 523 LRLSKQQNCPNPKAFIEEVDEAF-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             L  Q     P   + + + A        +  P  D+      + +L +  RR  + V 
Sbjct: 339 --LHIQSGWVPPDTPVNQFEAAIRTVCEPIFEKPLKDISF-GHFLLRLFQTARRFNMEVQ 395

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 396 PQLVLLQKTLLNVEGLGRQLYPDLDLWSTAQPYL 429


>gi|15679640|ref|NP_276757.1| ABC transporter [Methanothermobacter thermautotrophicus str. Delta
           H]
 gi|2622773|gb|AAB86118.1| ABC transporter [Methanothermobacter thermautotrophicus str. Delta
           H]
          Length = 561

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 150/301 (49%), Gaps = 43/301 (14%)

Query: 218 HVVLR-TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAF 276
           HV LR  LE  G  FIK GQ  +TR DL  R++ ++L++L  +AP   F   K+ +E   
Sbjct: 62  HVRLRLVLEELGTTFIKLGQVLSTRADLVGREVAEELAKLQDEAPPFPFEDVKRVLESEL 121

Query: 277 GRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF 336
           G  + E+F  F+E PVAS SI QVHRA LR            VAVKV+ PG+ ++++ D 
Sbjct: 122 GVPMEEVFAEFQEEPVASASIGQVHRARLR--------NGDAVAVKVQRPGIADTVKSDI 173

Query: 337 VIINLAAKISSV-IPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS 395
           +++   AK+++  +P +++  L   V +F   +  ++D  +EA ++ RF   F   + V 
Sbjct: 174 ILMKYLAKLANDRVPGLRYYNLPGIVAEFERAIRKELDYHQEANNVERFRAMFMDDETVY 233

Query: 396 FPKPVYPLVHPAVLVETYEQGECVS-RYVDELQGHERLKS-------ALAHIGTHALLKM 447
            P  VY           Y  G  ++  YVD ++  + LKS        +A  G     K 
Sbjct: 234 APY-VY---------REYSTGRVLTMEYVDGVKLTDILKSDIKFNARVIAERGARCYFKQ 283

Query: 448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVI-FLDVGMTAELSKTDRVNLVEF 506
           + +  F HAD HPGNILV+              K +V+ FLD GM   L ++ R  L E 
Sbjct: 284 IFIHGFFHADPHPGNILVQ--------------KGNVLCFLDFGMMGHLDRSFRDRLAEL 329

Query: 507 F 507
           F
Sbjct: 330 F 330


>gi|398954060|ref|ZP_10675764.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM33]
 gi|398153002|gb|EJM41510.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM33]
          Length = 534

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 177/392 (45%), Gaps = 25/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP FIK+GQ  +TR DL P D+  +L +L  + P      + K IE   G+++S++
Sbjct: 63  LQDLGPIFIKFGQILSTRRDLLPEDIADELMKLQDRVPPFDSQVSIKLIEEQLGKKISDV 122

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + A
Sbjct: 123 FSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPVIAQDLAWLFILA 174

Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           + +  + A  + L   + V  +   +  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 175 RAAEKLSADARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFDGSPLLYVPQVYWD 234

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
              P VLV     G  V+           +K  LA  G       +  D+F HADMHPGN
Sbjct: 235 WCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPGN 293

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V      S         P  I +D G+   L+  D+  L     A  +RD R  A+  
Sbjct: 294 IFVSTVNPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLH 344

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V   
Sbjct: 345 IDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQPQ 401

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 402 LVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|218894164|ref|YP_002443033.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa
           LESB58]
 gi|226695733|sp|B7V3F8.1|UBIB_PSEA8 RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|218774392|emb|CAW30209.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa
           LESB58]
          Length = 533

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 182/399 (45%), Gaps = 39/399 (9%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP FIK+GQ  +TR DL P D+  +L+ L  K P        K IE   G ++ ++
Sbjct: 64  LQDLGPIFIKFGQILSTRRDLLPDDIANELAWLQDKVPPFPPELAVKRIEEQLGAKIEQV 123

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD----FVII 339
           F  FE  P+AS S+AQVH A L+    G++     V VKV  P +   IR D    F++ 
Sbjct: 124 FARFEREPLASASVAQVHAARLK---SGEE-----VVVKVIRPNLEPVIRSDIAWLFILA 175

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
            LA ++SS     + L   E V  +   ++ ++DL REAA+ S+   NF     +  P+ 
Sbjct: 176 RLAERVSS---EARRLHPVEVVSDYEKTIVDELDLLREAANASQLRRNFEGSPLLYVPQV 232

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
            +    P VLV     G  V+  ++ L+       ALA  G       +  D+F HADMH
Sbjct: 233 YWDWCRPKVLVMERIYGIPVTD-LETLRDQRTDFKALAERGVEIFFTQVFRDSFFHADMH 291

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDR----VNLVEFFKAVARRDG 515
           PGNI V      S         P  I +D G+   L+  D+     NL+ FFK    RD 
Sbjct: 292 PGNIFVSTRAPWS---------PQYIAVDCGIVGSLTDEDQDYLARNLIAFFK----RDY 338

Query: 516 RTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRH 572
           R  A+  +    +  +    + +A I  V E    +  P  D+    + + +L +  RR 
Sbjct: 339 RKVAQLHIDSGWVPAETKVNDFEAAIRTVCE--PIFEKPLKDISF-GQVLLRLFQTARRF 395

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            + +   +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 396 NMEIQPQLVLLQKTLLNIEGLGRQLYPELDLWATAQPFL 434


>gi|259906905|ref|YP_002647261.1| ubiquinone biosynthesis protein UbiB [Erwinia pyrifoliae Ep1/96]
 gi|385786881|ref|YP_005817990.1| putative ubiquinone biosynthesis protein UbiB [Erwinia sp. Ejp617]
 gi|387869615|ref|YP_005800985.1| ubiquinone biosynthesis protein ubiB [Erwinia pyrifoliae DSM 12163]
 gi|224962527|emb|CAX53982.1| ubiquinone biosynthesis protein UbiB [Erwinia pyrifoliae Ep1/96]
 gi|283476698|emb|CAY72527.1| probable ubiquinone biosynthesis protein ubiB [Erwinia pyrifoliae
           DSM 12163]
 gi|310766153|gb|ADP11103.1| putative ubiquinone biosynthesis protein UbiB [Erwinia sp. Ejp617]
          Length = 545

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 177/400 (44%), Gaps = 26/400 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP +IK+GQ  +TR DLFP  +  +L+ L  + P    A   K IE++ G  +   
Sbjct: 61  LEQLGPVWIKFGQMMSTRRDLFPPHIADQLAMLQDRVPPFDGAQALKLIEQSLGAPVESQ 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           FD F   P+AS SIAQVH A+L+    G++     V +KV  P +   I+ D  +I  LA
Sbjct: 121 FDNFNIVPLASASIAQVHTATLKEN--GRE-----VVIKVIRPDILPVIKADMKLIYRLA 173

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  ++P  + LR  E V  +   ++ +++L REAA+  +   NF + + +  P+    
Sbjct: 174 RWVPRLLPDGRRLRPQEVVADYEKTLLDELNLLREAANAIQLRRNFDQSRMLYVPEIFSD 233

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                +LV     G  +S  V  L+ H      LA  G       +  D+F HADMHPGN
Sbjct: 234 YCSENMLVMERIYGIPISD-VATLEQHGVNLKLLAERGVQVFFTQVFRDSFFHADMHPGN 292

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V     +          P  I +D G+   L+K D+  L E F A   RD R  AE  
Sbjct: 293 IFVSYEHPED---------PQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELH 343

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +    N  + +  I  V E        E    H    +  L    RR  + V   
Sbjct: 344 VDSGWVPADTNVEDFEFAIRTVCEPIFEKPLAEISFGH---VLLNLFNTARRFNMEVQPQ 400

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           +  +  T L +EG  R+L P  ++  T +  L   +W K 
Sbjct: 401 LVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFL--ENWIKD 438


>gi|15600258|ref|NP_253752.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa PAO1]
 gi|107104164|ref|ZP_01368082.1| hypothetical protein PaerPA_01005237 [Pseudomonas aeruginosa PACS2]
 gi|254244053|ref|ZP_04937375.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa 2192]
 gi|296391915|ref|ZP_06881390.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa PAb1]
 gi|313110103|ref|ZP_07796005.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa 39016]
 gi|386061238|ref|YP_005977760.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa M18]
 gi|386063417|ref|YP_005978721.1| ubiquinone biosynthesis protein [Pseudomonas aeruginosa NCGM2.S1]
 gi|416859740|ref|ZP_11914015.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa
           138244]
 gi|416879030|ref|ZP_11920653.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa
           152504]
 gi|418588698|ref|ZP_13152700.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa
           MPAO1/P1]
 gi|418592455|ref|ZP_13156326.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa
           MPAO1/P2]
 gi|420142276|ref|ZP_14649894.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa CIG1]
 gi|421156588|ref|ZP_15616031.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa ATCC
           14886]
 gi|421163683|ref|ZP_15622378.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa ATCC
           25324]
 gi|421170909|ref|ZP_15628821.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa ATCC
           700888]
 gi|421183148|ref|ZP_15640612.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa E2]
 gi|421519631|ref|ZP_15966302.1| ubiquinone biosynthesis protein [Pseudomonas aeruginosa PAO579]
 gi|424944138|ref|ZP_18359901.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa
           NCMG1179]
 gi|451984425|ref|ZP_21932678.1| Ubiquinone biosynthesis monooxygenase UbiB [Pseudomonas aeruginosa
           18A]
 gi|14548304|sp|Q9HUB8.1|UBIB_PSEAE RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|9951357|gb|AAG08450.1|AE004919_11 ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa PAO1]
 gi|126197431|gb|EAZ61494.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa 2192]
 gi|310882507|gb|EFQ41101.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa 39016]
 gi|334837769|gb|EGM16517.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa
           152504]
 gi|334838115|gb|EGM16848.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa
           138244]
 gi|346060584|dbj|GAA20467.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa
           NCMG1179]
 gi|347307544|gb|AEO77658.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa M18]
 gi|348031976|dbj|BAK87336.1| ubiquinone biosynthesis protein [Pseudomonas aeruginosa NCGM2.S1]
 gi|375040458|gb|EHS33224.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa
           MPAO1/P1]
 gi|375048761|gb|EHS41277.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa
           MPAO1/P2]
 gi|403244957|gb|EJY58795.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa CIG1]
 gi|404345550|gb|EJZ71902.1| ubiquinone biosynthesis protein [Pseudomonas aeruginosa PAO579]
 gi|404518881|gb|EKA29684.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa ATCC
           14886]
 gi|404522032|gb|EKA32574.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa ATCC
           700888]
 gi|404528052|gb|EKA38173.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa ATCC
           25324]
 gi|404540697|gb|EKA50090.1| ubiquinone biosynthetic protein UbiB [Pseudomonas aeruginosa E2]
 gi|451757961|emb|CCQ85201.1| Ubiquinone biosynthesis monooxygenase UbiB [Pseudomonas aeruginosa
           18A]
 gi|453046577|gb|EME94293.1| ubiquinone biosynthesis protein [Pseudomonas aeruginosa PA21_ST175]
          Length = 533

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 182/400 (45%), Gaps = 39/400 (9%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L+ L  K P        K IE   G ++ +
Sbjct: 63  ALQDLGPIFIKFGQILSTRRDLLPDDIANELAWLQDKVPPFPPELAVKRIEEQLGAKIEQ 122

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRD----FVI 338
           +F  FE  P+AS S+AQVH A L+    G++     V VKV  P +   IR D    F++
Sbjct: 123 VFARFEREPLASASVAQVHAARLK---SGEE-----VVVKVIRPNLEPVIRSDIAWLFIL 174

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA ++SS     + L   E V  +   ++ ++DL REAA+ S+   NF     +  P+
Sbjct: 175 ARLAERVSS---EARRLHPVEVVSDYEKTIVDELDLLREAANASQLRRNFEGSPLLYVPQ 231

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +    P VLV     G  V+  ++ L+       ALA  G       +  D+F HADM
Sbjct: 232 VYWDWCRPKVLVMERIYGIPVTD-LETLRDQRTDFKALAERGVEIFFTQVFRDSFFHADM 290

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDR----VNLVEFFKAVARRD 514
           HPGNI V      S         P  I +D G+   L+  D+     NL+ FFK    RD
Sbjct: 291 HPGNIFVSTRAPWS---------PQYIAVDCGIVGSLTDEDQDYLARNLIAFFK----RD 337

Query: 515 GRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRR 571
            R  A+  +    +  +    + +A I  V E    +  P  D+    + + +L +  RR
Sbjct: 338 YRKVAQLHIDSGWVPAETKVNDFEAAIRTVCE--PIFEKPLKDISF-GQVLLRLFQTARR 394

Query: 572 HRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             + +   +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 395 FNMEIQPQLVLLQKTLLNIEGLGRQLYPELDLWATAQPFL 434


>gi|422648470|ref|ZP_16711592.1| ubiquinone biosynthesis protein UbiB [Pseudomonas syringae pv.
           maculicola str. ES4326]
 gi|330962006|gb|EGH62266.1| ubiquinone biosynthesis protein UbiB [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 539

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 175/392 (44%), Gaps = 25/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP FIK+GQ  +TR DL P D+  +L  L  + P        K IE   G R+ ++
Sbjct: 63  LQDLGPIFIKFGQLLSTRRDLLPEDIADELMLLQDRVPPFDQQLAIKLIEEQLGARICDV 122

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+E P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + A
Sbjct: 123 FSRFDETPLASASVAQVHAACLK---TGEE-----VVVKVVRPGLKPIIGQDMAWLFILA 174

Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           +I+  + A  + L   + V  +   +  ++DL REAA+ S+   NF   + +  P+  + 
Sbjct: 175 RIAERVSADARLLHPVQVVMDYEKTIYDELDLLREAANSSQLRRNFEGSELLYVPQVYWD 234

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
              P VLV     G  V+           +K  LA  G       +  D+F HADMHPGN
Sbjct: 235 WCRPKVLVMERIYGLQVTDMAGLADQRTDMK-MLAERGVEIFFTQIFRDSFFHADMHPGN 293

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V      S         P  I +D G+   L+  D+  L     A  +RD R  A+  
Sbjct: 294 IFVSTVNPWS---------PKYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLH 344

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V   
Sbjct: 345 IDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQPQ 401

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 402 LVLLQKTLLNIEGLGRQLYPELDLWSTAQPYL 433


>gi|126659816|ref|ZP_01730942.1| ABC1-like protein [Cyanothece sp. CCY0110]
 gi|126618873|gb|EAZ89616.1| ABC1-like protein [Cyanothece sp. CCY0110]
          Length = 560

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 174/399 (43%), Gaps = 34/399 (8%)

Query: 211 QFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKK 270
           Q R  WL   ++ L   GP FIK GQ  +TR DL P +  ++LS+L    P  S      
Sbjct: 53  QKRARWL---VKNLLQLGPTFIKIGQSLSTRADLIPLEYIQELSQLQDNVPPFSTEEAIA 109

Query: 271 TIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGE 330
            IER  G+ + ++FD FE  P+AS S+ QVHRA L   Y G++     V VKV+ PG+ +
Sbjct: 110 MIERELGQPVYDLFDSFEIEPLASASLGQVHRAKL---YSGKE-----VVVKVQRPGLEK 161

Query: 331 SIRRDFVIINLAAKI-SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFR 389
               DF +++   +I +    + K   L+   ++F   +  +VD   E  +  RF  NFR
Sbjct: 162 IFNLDFEVVHRLIRILTRFFNSFKKYNLEAIYEEFFELLFQEVDYIHEGKNAERFRDNFR 221

Query: 390 RWKDVSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLL 449
            +  +  PK  +      +L   Y  G  V      L+ +      +  +G  + LK LL
Sbjct: 222 GYSQIKVPKIYWKYSTKKILTLEYLPGIKVDDRA-ALEANNVNLDRIIQLGICSYLKQLL 280

Query: 450 VDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKA 509
           +D F  +D HPGN+ V               +  +IF D G  AE+    +  ++E F A
Sbjct: 281 IDGFFQSDPHPGNMAV-------------GQRGELIFYDFGTMAEVKTFAKDQMIEVFFA 327

Query: 510 VARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKV 569
           V ++D        + +        P   +  V    AF      D        +Q+ ++V
Sbjct: 328 VLKKDTDKVVNNLVYMG----LIEPLNDMTPVKRIVAFLLENFRDKPVDVRAFEQISDEV 383

Query: 570 ----RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
               +     +   +  ++ +   L+G  R LDP YN++
Sbjct: 384 YLMFKSQPFRLPPQMTFILKSLTTLDGIARALDPQYNLL 422


>gi|407802258|ref|ZP_11149100.1| ABC1 family protein, ubiquinone biosynthesis protein [Alcanivorax
           sp. W11-5]
 gi|407023933|gb|EKE35678.1| ABC1 family protein, ubiquinone biosynthesis protein [Alcanivorax
           sp. W11-5]
          Length = 577

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 182/391 (46%), Gaps = 28/391 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  ATR D+FPR+   +   L    P   F      +E+A G+ ++++
Sbjct: 90  LEEMGPTFVKLGQILATRVDMFPREWIDEFERLQDNTPALPFEQLLPMVEQALGKPVTKV 149

Query: 284 FDGFEEAPVASGSIAQVHRA-SLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           F   +  P+   SI QVHRA +LR    G++     V +K++ P +   I  D  ++   
Sbjct: 150 FRNIDPVPLGVASIGQVHRATTLR----GEQ-----VVLKIQKPDIRAKIDSDLRLLRHV 200

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+++    A ++  R  E V++F   +  ++D   EA +  R   N R+ + V  P+  +
Sbjct: 201 ARLAVDNSAELRRYRPVELVREFERSLSRELDFTIEARNADRIRKNLRKLEWVKVPRVYW 260

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P + V+   +G   +R ++ L+     +  +A  G     KM L D F HAD HPG
Sbjct: 261 SWTSPTLSVQELIEG-IPARQLERLEAAGMDRPLIARRGAAIAWKMALEDGFFHADPHPG 319

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           N L+    +             +  LD GM  +LS + R  +V+  K+V  ++    A  
Sbjct: 320 NFLIMPGNR-------------IGMLDYGMVGKLSHSRREQMVQIMKSVVLQEPEGCAAV 366

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
               S  Q     +A + +V++  + ++G P  DL      +  +   +R H + +  ++
Sbjct: 367 LASWSDGQPVKY-EALVADVEDVISLYYGIPLEDL-DVGALLNDITGLLRNHNLVLPPDI 424

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             ++   + LEG+ R + PG++VM   + L+
Sbjct: 425 ALLIKAIITLEGFGRLIHPGFDVMSEAEPLI 455


>gi|256823475|ref|YP_003147438.1| 2-polyprenylphenol 6-hydroxylase [Kangiella koreensis DSM 16069]
 gi|256797014|gb|ACV27670.1| 2-polyprenylphenol 6-hydroxylase [Kangiella koreensis DSM 16069]
          Length = 548

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 177/395 (44%), Gaps = 31/395 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L   GP ++K GQ  +TR DL P D+  +L++L  + P       +  +E+     + E+
Sbjct: 62  LTELGPIYVKLGQMLSTRRDLVPPDIADELAKLQDQVPPFDSNIARSIVEKQLDTPIDEL 121

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII---- 339
           F  F + P+AS SIAQVH A+L     G++     V VK+  PG+   I RD  ++    
Sbjct: 122 FASFNDTPLASASIAQVHEATLN---NGEE-----VVVKILRPGIRRKILRDMQMMHSMA 173

Query: 340 NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
           + A K SS     + LR+ E V+++   +  ++DL  EAA+ S   +NF     +  PK 
Sbjct: 174 HWAEKYSS---EARRLRIIEVVKEYDSTLAREIDLRIEAANTSHLRHNFECSDLLYVPKI 230

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
            +      +LV     G  +   ++ L+       ALA  G       +  D+F HADMH
Sbjct: 231 YWDYTRVKMLVMEKISGIPIGN-IEALKASGVDMKALADRGVEIFFTQVFRDSFFHADMH 289

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGNI V V+  +         +P  I +D G+   L ++D+  L + F A   RD R  A
Sbjct: 290 PGNIFVNVSNPQ---------EPQYIAIDCGIMGTLDESDKRYLADNFLAFFDRDYRRIA 340

Query: 520 ECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
           E  +    +    + P  ++ I    E        E    H    + QL +  RR  + V
Sbjct: 341 ELHVESGWIDADVSIPEFESAIRAACEPIFGKSLAEISFGH---FLIQLFQTARRFNMQV 397

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 398 QPQLVLLQKTLLYVEGLGRQLYPQLDLWQTAQPYL 432


>gi|95931137|ref|ZP_01313862.1| ABC-1 [Desulfuromonas acetoxidans DSM 684]
 gi|95132827|gb|EAT14501.1| ABC-1 [Desulfuromonas acetoxidans DSM 684]
          Length = 563

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 171/388 (44%), Gaps = 27/388 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK GQ  + RPD+ P     +L++L +       +  K  + +  G  ++E+
Sbjct: 71  LEELGPTFIKLGQILSARPDILPASYITELNKLQNDVRPVELSAIKSQLYQELGAPVNEL 130

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-LA 342
           F  F   PVA+ SIAQVH+A L             VAVKVR P +   I  D  I++ L+
Sbjct: 131 FSEFSPQPVAAASIAQVHQAKL--------PDGTTVAVKVRRPDIERIIETDLDILDSLS 182

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           + + +     +     E +++F   +  ++D  +E   L RF  NF    +V+ P   + 
Sbjct: 183 SLLENHTEPEELFSPREVIREFRRTIYRELDFTKEGHTLGRFRDNFHDSPNVTVPHVHWE 242

Query: 403 LVHPAVLVETYEQGECVSRYVDELQ--GHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           L   A+L   Y  G  +S   D+L   GH+ LK  LAH G  A L  +LV    HAD HP
Sbjct: 243 LTTDAILTMEYIDGIKISN-TDQLSAAGHD-LKQ-LAHNGAKAFLDQVLVFGLFHADPHP 299

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V                  + F+D+GM   +    R  L      + +RD      
Sbjct: 300 GNIFV-------------LPDSTLCFIDLGMVGHVDDDLRQQLTSLLLGIFKRDTDLLVS 346

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNV 580
             L    +    N      E+ E    +     + +   + + + ++ +RRH +    ++
Sbjct: 347 VMLAERDRSKEINTTRLKRELSEFIDDYYKVPLEHIDFFKLITEFIDLMRRHHIKFPSDL 406

Query: 581 CTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
                  + +EG  R+LDPG+N+++ ++
Sbjct: 407 MLFSKAMVTIEGIGRQLDPGFNLIEEIK 434


>gi|56477478|ref|YP_159067.1| ubiquinone biosynthesis protein UbiB [Aromatoleum aromaticum EbN1]
 gi|56313521|emb|CAI08166.1| predicted ABC1 family protein [Aromatoleum aromaticum EbN1]
          Length = 509

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 176/394 (44%), Gaps = 29/394 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + LE+ GP F+K+GQ  +TR DL P DL  +L+ L  + P        K +E  +GR + 
Sbjct: 54  QALESLGPIFVKFGQMLSTRRDLLPTDLADELALLQDRVPPFPTEQALKVLEDFYGRPVD 113

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           ++F  F   PVAS S+AQVH A    R P        VAVK+  PG+   I  D  ++  
Sbjct: 114 DVFVDFARTPVASASVAQVHFA----RLP----DGTEVAVKILRPGIERVIEHDLALLET 165

Query: 342 AAK-ISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           AA  +  +    + L+  E V +F+ ++  ++DL REAA+ S+   NF+    +  P+  
Sbjct: 166 AAMLLDRLWVEGRRLKPREVVAEFSKYLHDELDLMREAANCSQLRRNFKDSLLLVVPEVY 225

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           +     +V+V     G  +S+    L+      S L+  G       +  D F HADMHP
Sbjct: 226 WDWCGKSVMVMERMHGVPISQLA-TLRAQGTDLSRLSRAGVEIFFTQVFRDGFFHADMHP 284

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V    +              I LD G+   L++ D+  L + F A  +RD    A 
Sbjct: 285 GNIFVHADGR-------------YIALDFGIVGTLTEVDKNYLAQNFLAFFKRDYNRVAR 331

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             +    +         +  I  V E    +  P  D+    + + +L +  RR  + V 
Sbjct: 332 AHIEAGWVPAHTRVDEFEGAIRAVCE--PIFDRPLKDISF-GKTLLRLFQTARRFEMEVQ 388

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             +  +  T L +EG  R+LDP  ++  T +  L
Sbjct: 389 PQLVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFL 422


>gi|319786522|ref|YP_004145997.1| ABC transporter [Pseudoxanthomonas suwonensis 11-1]
 gi|317465034|gb|ADV26766.1| ABC-1 domain-containing protein [Pseudoxanthomonas suwonensis 11-1]
          Length = 557

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 177/386 (45%), Gaps = 24/386 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GPAFIK GQ  +TRPDL P      L  +  +      A  +K IE   G ++S +
Sbjct: 56  LEVLGPAFIKLGQSLSTRPDLVPAAYIDALDRIQDEVGPVETAVIEKIIEEELGAKISRV 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           F  F+  P+A+ S+AQVHRA+LR    G++     VAVKV+ PG+  +IR D  V+ +LA
Sbjct: 116 FASFDPVPLAAASLAQVHRATLR---DGRE-----VAVKVQRPGMDAAIRLDLEVLASLA 167

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
               ++  A + LR  + + +F   ++ ++D  REA +L RF  +   ++ +  P P++ 
Sbjct: 168 GTADALTQAGRRLRFADWIAEFRKILLLELDYRREAENLERFRESLSEYQHLLVPAPIWG 227

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
           L    VL      GE V+  V  LQ  E      A     A L  + V+  IHAD HPGN
Sbjct: 228 LSTSRVLTMELVHGEKVT-SVTGLQRTEMDLCTPASELMRAYLDQVFVNGDIHADPHPGN 286

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           +L            L R    +  +D+GM A+++   R  L++   A     G   A   
Sbjct: 287 VL------------LCRDG-RLALIDLGMVAQVAPRMRERLLKLLFAAVDARGEDVAREL 333

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCT 582
           + +  +    +  AF  +  +  A + T  G        + +L+       + V   +  
Sbjct: 334 VAIGTRLEQFDDAAFARDTGQLVARYATG-GKRTSEGRLLLELVACAAERGLRVPPEISL 392

Query: 583 VMVTTLVLEGWQRKLDPGYNVMDTLQ 608
           +  T L LE     LDP  +V + ++
Sbjct: 393 LGKTLLNLERVVDALDPEMDVQEVVE 418


>gi|166364666|ref|YP_001656939.1| hypothetical protein MAE_19250 [Microcystis aeruginosa NIES-843]
 gi|166087039|dbj|BAG01747.1| hypothetical protein MAE_19250 [Microcystis aeruginosa NIES-843]
          Length = 549

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 191/407 (46%), Gaps = 38/407 (9%)

Query: 218 HVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG 277
            V+ + L   GP ++K GQ  +TRPDL P +  + L+ L ++ P  ++   +  I     
Sbjct: 44  EVLKKILVELGPFYVKLGQLLSTRPDLLPANYIEALTALQAQVPPVAWTDIEIVITEQLA 103

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
           + + E+F      P+A+GSI Q+HRA+L     G++     VA+KV  PG+ + + +D  
Sbjct: 104 KPIEEVFKYINPQPIAAGSIGQIHRATL---LSGEE-----VAIKVLRPGIEKIVAQDSA 155

Query: 338 IINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF--RRW---K 392
           +I   A + ++    +   + +  ++F   + +++D  +E  +  +  YN    RW   K
Sbjct: 156 LIKGIADLVALTEFGQSYDVVDLAEEFIKAVNAELDFTQEGHYTDQLRYNLTQSRWSEPK 215

Query: 393 DVSFPKPVYPLVHPAVLVETYEQGEC-----VSRYVDELQGHERLKSALAHIGTHALLKM 447
            +  PK  + L +  +LV  + +G+      VSR   E Q   + K+ +  I   +  + 
Sbjct: 216 QLVIPKIYWHLTNSRLLVLEWLEGKQILEADVSRPATE-QAISQRKTEITRILFRSFFQQ 274

Query: 448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF 507
           + +D F HAD HPGNI              +     V  +D GM   L    +  L E  
Sbjct: 275 IYIDGFFHADPHPGNI-------------FYLDDGRVALIDCGMVGRLDPQTQQILTELL 321

Query: 508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIE-EVD--EAFAFWGTPEGDLVHPAECMQQ 564
            A+   D +  ++ T++LS+      P   ++ EVD       +     + ++ +E + +
Sbjct: 322 LAIVDLDAKRCSQLTIKLSE---SVVPITLVQLEVDYERMLRKYYNLNLNQINFSEVVYE 378

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           LL+  RR+R+ + GN+     +   LEG  RK +P  N+++ ++ LL
Sbjct: 379 LLQIARRNRIKLPGNLGLFAKSLANLEGTARKFNPDINILEEVKPLL 425


>gi|146305558|ref|YP_001186023.1| 2-octaprenylphenol hydroxylase [Pseudomonas mendocina ymp]
 gi|167011567|sp|A4XPM5.1|UBIB_PSEMY RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|145573759|gb|ABP83291.1| 2-octaprenylphenol hydroxylase [Pseudomonas mendocina ymp]
          Length = 527

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 177/397 (44%), Gaps = 33/397 (8%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP FIK+GQ  +TR DL P D+  +L+ L  + P          IER  G  +S+
Sbjct: 62  ALEDLGPIFIKFGQLLSTRRDLLPPDIADELARLQDQVPPFPEDQAIALIERQLGAPVSQ 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   IR+D   + L 
Sbjct: 122 LFARFDSQPLASASVAQVHAAQLK---SGEE-----VVVKVVRPGLKPVIRQDLAWLFLL 173

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+I+    A  + LR  E V  +   +  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 174 ARIAERASADARRLRPVEVVSDYEKTIFDELDLLREAANASQLRRNFEGSPLLYVPQVYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
            L    VLV     G  V+           +K  LA  G       +  D+F HADMHPG
Sbjct: 234 DLCRHQVLVMERIYGVPVTDLATLADQRTDMK-LLAERGVEIFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDR----VNLVEFFKAVARRDGRT 517
           NI V      S         P  I +D G+   L+  D+     NL+ FFK    RD R 
Sbjct: 293 NIFVSTRTPWS---------PQYIAIDCGIIGSLTDEDQDYLARNLIAFFK----RDYRK 339

Query: 518 AAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRV 574
            A+  +    +         +A I  V E    +  P  D+    + + +L +  RR  +
Sbjct: 340 VAQLHIDSGWVPADTKVNEFEAAIRTVCE--PIFEKPLKDISF-GQLLLRLFQTARRFNM 396

Query: 575 NVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            V   +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 397 EVQPQLVLLQKTLLNIEGLGRQLYPDLDLWSTAQPFL 433


>gi|91785930|ref|YP_546882.1| 2-octaprenylphenol hydroxylase [Polaromonas sp. JS666]
 gi|91695155|gb|ABE41984.1| 2-octaprenylphenol hydroxylase [Polaromonas sp. JS666]
          Length = 592

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 182/402 (45%), Gaps = 46/402 (11%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K GQ  A R DL   +   +L  LHS+ P       +  +    G     
Sbjct: 93  ALEELGPTFVKLGQILAGRADLLGPEWIAELQRLHSQVPAVPLDDLRPQLREDLGDEPEN 152

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
           IF  F+  P+A+ SIAQVHRA L   + G +     V VK+R PG+ E I  D  +++ L
Sbjct: 153 IFARFDVEPLAAASIAQVHRAQL---HDGSE-----VVVKIRRPGIREVIEADLRLLDRL 204

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA   + +P++K  R    V++FA  +  ++DLA E  +  R   NF        P  + 
Sbjct: 205 AAIAEADMPSLKPYRPRRLVREFARSLRRELDLAVECHNAERVADNF-----AQTPHVLI 259

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERL----------KSALAHIGTHALLKMLLVD 451
           P VH A   E     +    +VD + G ERL          ++ LA  G  A+LKM++ D
Sbjct: 260 PRVHWAHTSERINTQD----FVDGIPG-ERLDLLPADAGFDRTVLAQRGARAVLKMIVED 314

Query: 452 NFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVA 511
            F HAD HPGN+      +             + F+D GM   LS   R  L++    + 
Sbjct: 315 GFFHADPHPGNVFYLPGNR-------------IAFIDFGMVGSLSPQRREELLQLLLGLV 361

Query: 512 RRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA--FWGTPEGDLVHPAECMQQLLEKV 569
            RD +  A   L  +   +  +      E+ EAF   + G+P   L +  E + ++   +
Sbjct: 362 TRDAQAVATVLLDWAGDDHGQSLSQLETEI-EAFVDQYHGSPLAQL-NLGEMLTRITTLL 419

Query: 570 RRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           R H + +  ++  ++   + LEG  R LDPG+++      LL
Sbjct: 420 REHHLTLPPDLALLIKAFISLEGMGRGLDPGFHMATEAMPLL 461


>gi|365155360|ref|ZP_09351737.1| 2-polyprenylphenol 6-hydroxylase [Bacillus smithii 7_3_47FAA]
 gi|363628490|gb|EHL79245.1| 2-polyprenylphenol 6-hydroxylase [Bacillus smithii 7_3_47FAA]
          Length = 558

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 178/390 (45%), Gaps = 35/390 (8%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K GQ A+TRPDL P ++ ++L +L    P  SF   ++ ++   G  +  
Sbjct: 62  VLEELGPTFVKLGQIASTRPDLIPEEIIRELEKLQDHVPPFSFQEVREIVQNELGEEIEN 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII--- 339
           IF  FE+ P+A+ SI QVHRA+LR    G++     VAVK++ P +   I  D  I+   
Sbjct: 122 IFLHFEDVPLAAASIGQVHRATLR---NGEQ-----VAVKIQRPNITTVIETDLEILQDL 173

Query: 340 -NLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA + S +  A K+ ++ + + +F+  +  ++D   EA +  +    F+    +  PK
Sbjct: 174 ATLAEQRSEL--AAKY-QIRDMIDEFSKSLREELDYTNEARNAEKIANQFKDDSTIYVPK 230

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
             +      VL   Y +G   +  +D+L+ +      LA      + + + +  F H D 
Sbjct: 231 VFWEYTTKKVLTMEYVEGVKFNE-IDQLKKNGYNLKNLAERLAKGIFQQVFIGGFFHGDP 289

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARR--DGR 516
           HPGN+LV   +              + FLD GM   L+   R +      ++ R+  DG 
Sbjct: 290 HPGNVLVLPGEI-------------IAFLDFGMAGRLTPDMRYHFSSLIISLMRQSTDGV 336

Query: 517 TAAECTLRLSKQQ-NCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
             +   + L     N    +A +E + E   ++  P    +   E +  L     +H + 
Sbjct: 337 IHSISAMGLIPDDVNMKQLQADVERMRE--KYYDVPLSQ-IRLGEAVNDLFRLAFQHSIR 393

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
           +  ++  +  T L +EG    LDP ++++D
Sbjct: 394 IPADLSLLGKTLLTVEGVVENLDPEFSILD 423


>gi|159028753|emb|CAO89924.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 549

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 191/407 (46%), Gaps = 38/407 (9%)

Query: 218 HVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG 277
            V+ + L   GP ++K GQ  +TRPDL P +  + L+ L ++ P  ++   +  I     
Sbjct: 44  EVLKKILVELGPFYVKLGQLLSTRPDLLPANYIEALTALQAQVPPVAWKDIEIVITEQLA 103

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
           + + ++F      P+A+GSI Q+HRA+L     G++     VA+KV  PG+ + + +D  
Sbjct: 104 KPIEQVFKYINTQPIAAGSIGQIHRATL---LSGEE-----VAIKVLRPGIEKIVAQDSA 155

Query: 338 IINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF--RRW---K 392
           +I   A + ++    +   + +  ++F   + +++D  +E  +  +  YN    RW   K
Sbjct: 156 LIKGIADLVALTEFGQSYDVVDLAEEFIKAVNAELDFTQEGNYTDQLRYNLTQSRWSEPK 215

Query: 393 DVSFPKPVYPLVHPAVLVETYEQGEC-----VSRYVDELQGHERLKSALAHIGTHALLKM 447
            +  PK  + L +  +LV  + +G+      VSR   E Q   + KS +  I   +  + 
Sbjct: 216 QLVIPKIYWHLTNSRILVLEWLEGKQILEADVSRPPTE-QAISQRKSEITRILFRSFFQQ 274

Query: 448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF 507
           + +D F HAD HPGNI              +     V  +D GM   L    +  L E  
Sbjct: 275 IYIDGFFHADPHPGNI-------------FYLDDGRVALIDCGMVGRLDPQTQQILTELL 321

Query: 508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIE-EVD--EAFAFWGTPEGDLVHPAECMQQ 564
            A+   D +  ++ T++LS+      P   ++ EVD       +     + ++ +E + +
Sbjct: 322 LAIVDLDAKRCSQLTIKLSE---SVVPITLVQLEVDYERMLRKYYNLNLNQINFSEVVYE 378

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           LL+  RR+R+ + GN+     +   LEG  RK +P  N+++ ++ LL
Sbjct: 379 LLQVARRNRIKLPGNLGLFAKSLANLEGTARKFNPDINILEEVKPLL 425


>gi|254557925|ref|YP_003064342.1| protein kinase [Lactobacillus plantarum JDM1]
 gi|308182013|ref|YP_003926141.1| ubiquinone biosynthesis protein UbiB [Lactobacillus plantarum
           subsp. plantarum ST-III]
 gi|380033958|ref|YP_004890949.1| ubiquinone biosynthesis protein, ABC1 family [Lactobacillus
           plantarum WCFS1]
 gi|418273452|ref|ZP_12889080.1| ubiquinone biosynthesis protein, ABC1 family [Lactobacillus
           plantarum subsp. plantarum NC8]
 gi|254046852|gb|ACT63645.1| protein kinase [Lactobacillus plantarum JDM1]
 gi|308047504|gb|ADO00048.1| ubiquinone biosynthesis protein UbiB [Lactobacillus plantarum
           subsp. plantarum ST-III]
 gi|342243201|emb|CCC80435.1| ubiquinone biosynthesis protein, ABC1 family [Lactobacillus
           plantarum WCFS1]
 gi|376011066|gb|EHS84390.1| ubiquinone biosynthesis protein, ABC1 family [Lactobacillus
           plantarum subsp. plantarum NC8]
          Length = 578

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 187/433 (43%), Gaps = 40/433 (9%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
            E  GP FIK GQ  ++R D+   +   +  +L +      F+  K+TIE+  G+ ++E+
Sbjct: 50  FEELGPTFIKIGQILSSRTDIVKPEFANEFKKLQNNVRADDFSVVKQTIEQQTGKPINEM 109

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+E P AS S+ Q H A+L     GQK     V VKV+HPG+   +  D  +   A 
Sbjct: 110 FAQFDERPFASASMGQTHHATL---LNGQK-----VVVKVQHPGIDAEVALDISLFERAL 161

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKD-VSFPKPVYP 402
            +   IP    + L E V +    + +++D + E  +  RF Y      D +  P+    
Sbjct: 162 PLLRYIPESSVVDLREMVGEIKRSLFNELDTSIEVKNGLRF-YRLNNADDIIRVPRVYAK 220

Query: 403 LVHPAVLVETYEQGECVSRYV------DELQGH--ERLKSALAHIGTHALLKMLLVDNFI 454
                VLV  Y  G  +  ++      DE   H  +  +  LAH+     LK +  D F 
Sbjct: 221 YSTQKVLVNQYMPGTTIQHFMAQMLAADEDGNHQYDDERRYLAHVLVQNFLKQVFEDGFF 280

Query: 455 HADMHPGNILVRVAQ----------KKSSQKRLFRSKP--HVIFLDVGMTAELSKTDRVN 502
           HAD HPGNIL+R  Q           K   K   R  P   +++LD GM  E+S      
Sbjct: 281 HADPHPGNILLRELQPDDIGYHDTVPKHGGKIGKRQLPPYRLVYLDFGMMGEISPALMAG 340

Query: 503 LVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAEC 561
           +     AV   D     +  L +S +    + +AF  E+    + ++ +  GD+      
Sbjct: 341 IANVVVAVTTEDTHQVGKAILAISNRTGVVDEEAFFSELAPFLSQYYNSGLGDIDFQG-L 399

Query: 562 MQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA-----DW 616
           + ++++  R + + ++  V  +      +EG    LDP  ++MD  +    K      +W
Sbjct: 400 LFEMVKVCRSNNIQMNPAVTMLGKAFGTIEGIVETLDPTLSMMDVARPFARKYIRENFNW 459

Query: 617 AKSLSYTIDGLMA 629
              L    DG++A
Sbjct: 460 RNELE---DGMLA 469


>gi|109900509|ref|YP_663764.1| 2-polyprenylphenol 6-hydroxylase [Pseudoalteromonas atlantica T6c]
 gi|109702790|gb|ABG42710.1| 2-octaprenylphenol hydroxylase [Pseudoalteromonas atlantica T6c]
          Length = 544

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 174/393 (44%), Gaps = 25/393 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSE 282
           L++ GP FIK+GQ  +TR DL  +D+  +L+ L  +         ++ I  A G   LSE
Sbjct: 58  LQSLGPVFIKFGQMLSTRKDLLSQDIANELAILQDQVEPFDSEVAQRIIRHALGVSDLSE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +F  FEE P+AS SIAQVH A L     G   +   V VKV  P +G +I  D  ++   
Sbjct: 118 VFSEFEETPLASASIAQVHAAKL----IGHSEE---VVVKVIRPNIGSAIHADIQLMRTF 170

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +  ++P  K LR  E V ++   ++ ++DL  EAA+  +F  NF     +  P    
Sbjct: 171 ANALQKLLPDGKRLRPVEVVAEYEKTIIGELDLLNEAANGIQFKRNFEDSTALYVPHIYS 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
              H  V+V     G  +S  V  L+        LA  G       +  D+F HADMHPG
Sbjct: 231 DYCHANVMVMERIYGTPISD-VATLEARGTNMKKLAERGVEVFFTQVFRDSFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V +              P  I +D G+   L+  D+  L E F A   R+ R  AE 
Sbjct: 290 NIFVALDNP---------DDPQYITIDYGIVGTLNSEDKRYLAENFIAFFNRNYRKVAEL 340

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +    +    +A I  V E    +  P  + +  +  + QL    RR  + +  
Sbjct: 341 HVDSGWVPSTTSIDEFEASIRRVCE--PIFQKPLAE-IEFSNVLLQLFNTARRFNMIIQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++  T +  L
Sbjct: 398 QLVLLQKTLLYIEGLGRQLYPQLDLWQTAKPFL 430


>gi|424867965|ref|ZP_18291733.1| ABC1 family transporter [Leptospirillum sp. Group II 'C75']
 gi|206603633|gb|EDZ40113.1| ABC1 family transporter [Leptospirillum sp. Group II '5-way CG']
 gi|387221560|gb|EIJ76101.1| ABC1 family transporter [Leptospirillum sp. Group II 'C75']
          Length = 557

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 173/393 (44%), Gaps = 43/393 (10%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GPA IK GQ  ++R DLFP +   +  +L    P        K +E A  R +  +
Sbjct: 65  LEELGPAAIKLGQILSSRADLFPPEFLAEFQKLQDNLPPIPPDRLDKAVEEALKRPIDSV 124

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-LA 342
           F  F+  PVA  SI+QVHRA L   + G+      VAVK+R PG+ +S+  D  I+  L+
Sbjct: 125 FSEFDRHPVAQASISQVHRARL---HSGE-----TVAVKIRRPGILDSVEPDLRILGFLS 176

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +   I  +K  R     +Q+   +  ++D   EA ++ R   NFR    +  PK    
Sbjct: 177 DLVERNIEDMKVFRPRALARQYIRTLRKELDFTHEARNMERARKNFRDEPSLVIPKLYSE 236

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSA---LAHIGTHALLKMLLVDNFIHADMH 459
               AVLV  Y +G  +     E    E+L +    +AH+G  ++L  + V  F   D H
Sbjct: 237 WSSEAVLVMEYLEGVSIR----ETGSFEKLGATPPEVAHLGARSILLQVFVHGFFQGDPH 292

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGN+LV    +             +  LD GM   LS   R  L +   ++  RD     
Sbjct: 293 PGNVLVLPGHR-------------IGILDFGMFGSLSPDRRDLLGDLLVSLVERDIPFMI 339

Query: 520 ECTLRL-------SKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRH 572
               RL        ++    +  AF+EE      F   P  + +       +L E VR H
Sbjct: 340 RTLERLRALPEDFREEDLASDISAFLEE------FTNRPLQE-IRLDHMSAELFELVRTH 392

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
           R+ +  ++  +    +++EG  R LDP +N+++
Sbjct: 393 RLTLPPDLSLLFRALVIMEGIGRTLDPTFNMIE 425


>gi|148263456|ref|YP_001230162.1| hypothetical protein Gura_1388 [Geobacter uraniireducens Rf4]
 gi|146396956|gb|ABQ25589.1| 2-octaprenylphenol hydroxylase [Geobacter uraniireducens Rf4]
          Length = 561

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 174/396 (43%), Gaps = 31/396 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP+FIK GQ  +TRPD+ PR+   + ++L    P   F   K  I    G+     
Sbjct: 69  LEELGPSFIKLGQVLSTRPDVIPRNFVDEFAKLQDNVPSFPFEEVKTQIRLELGKAAENF 128

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           F   E   +A+ SIAQVHRA L     G+      V VKVR PGV E I  D  V++ LA
Sbjct: 129 FSYLEPVAIAAASIAQVHRARL---ISGED-----VVVKVRRPGVVEVIETDIDVLMGLA 180

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +   +P          V++FA  +  ++D +RE   + +   NF     + FPK  + 
Sbjct: 181 LLMERHMPGSDIYDPVGLVKEFARTIRREMDFSREGHTIEKIRDNFGGDATLHFPKVYWQ 240

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERL---KSALAHIGTHALLKMLLVDNFIHADMH 459
                VL   Y  G      V++L   ER    +  +A  G  A LKM+L   F H D H
Sbjct: 241 ETGKGVLTMEYINGIK----VNDLAAIERTGLDRKLIARRGADAFLKMVLEHGFFHGDPH 296

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGN+L+                  +  LD G+   L    +V L +   A+ +RD     
Sbjct: 297 PGNVLILPGNV-------------ICLLDYGIVGRLDAQLKVYLTDILLAILKRDVDEVI 343

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAF-AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
                  +     N +A   ++ E   +++  P  D +   + + + ++ +    +    
Sbjct: 344 SLLTYSGEISENLNTRALKRDLSEFIDSYYEIPLQD-IEVGKMLAEFIDIITTFHIKFQP 402

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA 614
           ++  +  + +++EG  R+LDP +++++ L+  + +A
Sbjct: 403 DLMLLTKSLVIVEGMGRELDPDFDMVEHLRPFMEQA 438


>gi|87120356|ref|ZP_01076251.1| hypothetical protein MED121_09193 [Marinomonas sp. MED121]
 gi|86164459|gb|EAQ65729.1| hypothetical protein MED121_09193 [Marinomonas sp. MED121]
          Length = 547

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 185/400 (46%), Gaps = 27/400 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L + GP F+K+GQ  +TR DL   D+  +L++L  K P  +    +  IE A G  + EI
Sbjct: 60  LISLGPIFVKFGQILSTRRDLLDEDIANELAKLQDKVPPFNKDEARALIEHALGANVEEI 119

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           F  F   P+AS SIAQVH A+L+    G++     V VKV  P + ++IR+D  ++  LA
Sbjct: 120 FQDFTIEPLASASIAQVHCATLK---SGEE-----VVVKVIRPKIEKTIRKDIGLLYALA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             + ++    + LR  E ++ +   ++ ++DL +EAA+ ++   NF     +  P   + 
Sbjct: 172 KLVRNINDDGRRLRPVEIIEDYEHTILDELDLTKEAANTAQLRRNFENSNLLYVPHIHWD 231

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                V+V     G  V+  +DEL+  +     LA  G       +   +F HADMHPGN
Sbjct: 232 YTRQNVMVAEKISGIPVAN-IDELKQADVDMKCLAVRGVEIFFTQVFDHSFFHADMHPGN 290

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V +   KS         P  I +D  +   LS  D+  L     A  +RD R  AE  
Sbjct: 291 IFVDITNPKS---------PKYIGIDCAIMGSLSYEDKSYLARNLLAFFKRDYRLVAELH 341

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    + K       ++ I  V E    +  P  D+    + +  L +  RR  + V   
Sbjct: 342 VESGWVPKGTPVHAFESAIRSVCE--PMFAKPLKDISF-GQVIIGLFQTARRFNMEVQPQ 398

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           +  +  T L +EG  R+L P  ++ +T Q  L +  W K+
Sbjct: 399 LVLLEKTLLNIEGLGRQLYPDLDLWETAQPFLER--WLKT 436


>gi|71731657|gb|EAO33717.1| 2-polyprenylphenol 6-hydroxylase [Xylella fastidiosa subsp. sandyi
           Ann-1]
          Length = 552

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 186/424 (43%), Gaps = 37/424 (8%)

Query: 187 RALYLGVLFSPSIMMAPFADSFGPQFRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFP 246
           R L L   F P I       S G + R          L+  GP F+K+GQ  +TR DL P
Sbjct: 30  RWLRLAKPFVPRISAEIVEQSRGRRLR--------LALQELGPIFVKFGQILSTRRDLVP 81

Query: 247 RDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLR 306
           +D+  +L  L  +         +  IE A G+ +   F  F+  P+AS SI+QVH A+L 
Sbjct: 82  QDIGDELVMLQDRVEPFEGQTARSIIETALGKSVESAFAHFDTVPLASASISQVHAATLH 141

Query: 307 FRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLAAKISSVIPAVKWLRLDESVQQFA 365
            R          V VKV  P +   I  D  ++ +LA  I    P    +R  E V +  
Sbjct: 142 DRRE--------VVVKVLRPDIEHQISDDIALLKSLATLIEHTHPNADKIRPREIVAEIE 193

Query: 366 VFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEQGECV-SRYVD 424
             + +++DL RE A+ S     +    D+  P+ ++   H A  V T E+   + S  + 
Sbjct: 194 TTLAAELDLQREGANASVLRRFWEASDDIYVPEVIWS--HSAERVLTLERMYGIPSDDIA 251

Query: 425 ELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHV 484
            L      + AL+  G       +  DNF HAD H GNI V      S   R  +S P  
Sbjct: 252 LLDASGIDRKALSSKGIRVFYTQVFRDNFFHADAHSGNIWV-----DSDPAR--KSNPRF 304

Query: 485 IFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEA 544
           I LD G+  +LS+ D+  L E F A+  +D R  AE    L  +     P   IEE++ A
Sbjct: 305 IVLDFGIMGQLSQKDQYYLAENFMAIFHKDYRRIAE----LHVEAGWIPPHVRIEELEAA 360

Query: 545 F-----AFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDP 599
                  ++  P    +  AE + +L    RR+++ +   +  +  T L +EG  R+LDP
Sbjct: 361 ARSVCEPYFTRPLSQ-ISLAEVLMKLFHVARRYQLTLQPQLILLQKTLLNIEGVGRQLDP 419

Query: 600 GYNV 603
             ++
Sbjct: 420 ELDI 423


>gi|448819615|ref|YP_007412777.1| Ubiquinone biosynthesis protein, ABC1 family [Lactobacillus
           plantarum ZJ316]
 gi|448273112|gb|AGE37631.1| Ubiquinone biosynthesis protein, ABC1 family [Lactobacillus
           plantarum ZJ316]
          Length = 578

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 187/433 (43%), Gaps = 40/433 (9%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
            E  GP FIK GQ  ++R D+   +   +  +L +      F+  K+TIE+  G+ ++E+
Sbjct: 50  FEELGPTFIKIGQILSSRTDIVKPEFANEFKKLQNNVRADDFSVVKQTIEQQTGKPINEM 109

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+E P AS S+ Q H A+L     GQK     V VKV+HPG+   +  D  +   A 
Sbjct: 110 FAQFDERPFASASMGQTHHATL---LNGQK-----VVVKVQHPGIDAEVALDISLFERAL 161

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKD-VSFPKPVYP 402
            +   IP    + L E V +    + +++D + E  +  RF Y      D +  P+    
Sbjct: 162 PLLRYIPESSVVDLREMVGEIKRSLFNELDTSIEVKNGLRF-YRLNNADDIIRVPRVYAK 220

Query: 403 LVHPAVLVETYEQGECVSRYV------DELQGH--ERLKSALAHIGTHALLKMLLVDNFI 454
                VLV  Y  G  +  ++      DE   H  +  +  LAH+     LK +  D F 
Sbjct: 221 YSTQKVLVNQYMPGTTIQHFMAQMLAADEDGNHQYDDERRYLAHVLVQNFLKQVFEDGFF 280

Query: 455 HADMHPGNILVRVAQ----------KKSSQKRLFRSKP--HVIFLDVGMTAELSKTDRVN 502
           HAD HPGNIL+R  Q           K   K   R  P   +++LD GM  E+S      
Sbjct: 281 HADPHPGNILLRELQPDDIGYHDTVPKHGGKIGKRQLPPYRLVYLDFGMMGEISPALMAG 340

Query: 503 LVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAEC 561
           +     AV   D     +  L +S +    + +AF  E+    + ++ +  GD+      
Sbjct: 341 IANVVVAVTTEDTHQVGKAILAISNRTGVVDEEAFFSELAPFLSQYYNSGLGDIDFQG-L 399

Query: 562 MQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA-----DW 616
           + ++++  R + + ++  V  +      +EG    LDP  ++MD  +    K      +W
Sbjct: 400 LFEMVKVCRSNNIQMNPAVTMLGKAFGTIEGIVETLDPTLSMMDVARPFARKYIRENFNW 459

Query: 617 AKSLSYTIDGLMA 629
              L    DG++A
Sbjct: 460 RNELE---DGMLA 469


>gi|269468551|gb|EEZ80200.1| hypothetical protein Sup05_0669 [uncultured SUP05 cluster
           bacterium]
          Length = 534

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 177/389 (45%), Gaps = 24/389 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK+GQ  +TR DL P D+  +L++L  K P    A  K+ IE + G     +
Sbjct: 59  LEELGPIFIKFGQTLSTRRDLLPDDIGDELAKLQDKCPAFDSADAKQIIEGSLGDTTDNL 118

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F++ P+AS SIAQVH A     + G +     V VKV  P + E I+RD  ++   A
Sbjct: 119 FMSFDKDPLASASIAQVHTA---ITHDGDE-----VVVKVVRPNIDEIIKRDLALMYALA 170

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPL 403
           ++ S  P  K +R  E V +F   +++++++  EAA+ S+   NF     +  P+  + L
Sbjct: 171 RLISKHPVSKKMRPIEVVAEFENIILNELNMLNEAANASKLRKNFSDSSLLYVPEVYWSL 230

Query: 404 VHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNI 463
               VL      G  V   +++L+        LA  G       +   NF HADMHPGNI
Sbjct: 231 CSETVLTTERIYGTPVGD-IEQLKADNVNMKKLAEEGVIIFFTQVFKHNFFHADMHPGNI 289

Query: 464 LVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTL 523
            V              +  + I +D G+   L++ D+  + + F A   +D R  A   +
Sbjct: 290 FV-------------SADGNYIGVDFGIMGTLTEADKDFIADIFLAFFNQDYRAVARAYI 336

Query: 524 RLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCT 582
                    +  AF   +       +  P G++    + + +L+++ +   + +   +  
Sbjct: 337 DSGWASASTDAVAFERAIGRICEPMFEKPLGEISF-GQVLLELIQEAKNFDITIQPQLLL 395

Query: 583 VMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  T L +EG  R+L P  ++  T +  L
Sbjct: 396 LDKTLLNIEGLGRQLYPQLDLWATAKPFL 424


>gi|261338442|ref|ZP_05966326.1| putative ubiquinone biosynthesis protein AarF [Bifidobacterium
           gallicum DSM 20093]
 gi|270276427|gb|EFA22281.1| putative ubiquinone biosynthesis protein AarF [Bifidobacterium
           gallicum DSM 20093]
          Length = 632

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 180/392 (45%), Gaps = 43/392 (10%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  + R ++ P+  C +L++L + A    +A    T+E  +GRRL ++
Sbjct: 132 LEALGPTFVKVGQVLSMRSEILPQAFCDELAKLRADADPMPYAVVVDTLETEYGRRLDDV 191

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F+  +  P+ S S+AQVHRA L     G+      VAVKV+ PGV E++  D  ++ ++A
Sbjct: 192 FESVDPTPLGSASLAQVHRARL---VTGED-----VAVKVQRPGVRETMAEDISLMRSIA 243

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
              + ++   + + L   +++       + +   EA +L  F     ++  +  P P   
Sbjct: 244 RGATHIMHNSQVVDLQGVIEELWDTFDEETNFLNEARNLWEFKKFCNQYAYMDCPTPFPE 303

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDN---------F 453
           L    VLV  Y  G  ++ +  EL        +L  IGT       LVDN         F
Sbjct: 304 LCTEHVLVMEYMTGIPIA-HTKELVAD---GYSLTEIGTK------LVDNYASQILDVGF 353

Query: 454 IHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARR 513
            HAD HPGNI++   Q              ++ LD+GMT  L    R  L +   AVA++
Sbjct: 354 FHADPHPGNIMIHGGQ--------------IVLLDLGMTGRLDAPTRAALKQMLFAVAKQ 399

Query: 514 DGRTAAECTLRLSKQQ-NCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRH 572
           D    A+  LR ++ Q +  +    + ++D     +GT +   +  A+ M  L     RH
Sbjct: 400 DSPGLADALLRFTRSQADSVDYPELLADLDGIVQQFGTVDLVDLDLAQYMGALTSMAHRH 459

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
            + +  ++ TV    + LEG   +  P  N++
Sbjct: 460 GIEMPSSITTVGRALVTLEGLLTEFIPNVNMI 491


>gi|390442126|ref|ZP_10230144.1| conserved hypothetical protein [Microcystis sp. T1-4]
 gi|389834570|emb|CCI34270.1| conserved hypothetical protein [Microcystis sp. T1-4]
          Length = 549

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 190/407 (46%), Gaps = 38/407 (9%)

Query: 218 HVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG 277
            V+ + L   GP ++K GQ  +TRPDL P +  + L+ L ++ P  ++   +  I     
Sbjct: 44  EVLKKILVELGPFYVKLGQLLSTRPDLLPANYIEALTALQAQVPPVAWTDIEIVITEQLA 103

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
           + + ++F      P+A+GSI Q+HRA+L     G++     VA+KV  PG+ + + +D  
Sbjct: 104 KPIEQVFKYINPQPIAAGSIGQIHRATL---LSGEE-----VAIKVLRPGIEKIVAQDSA 155

Query: 338 IINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF--RRW---K 392
           +I   A + ++    +   +    ++F   + +++D  +E  +  +  YN    RW   K
Sbjct: 156 LIKGIADLVALTEFGQSYDVVNLAEEFIKAVNAELDFTQEGHYTDQLRYNLTQSRWSEPK 215

Query: 393 DVSFPKPVYPLVHPAVLVETYEQGEC-----VSRYVDELQGHERLKSALAHIGTHALLKM 447
            +  PK  + L +  +LV  + +G+      VSR   E Q   + KS +  I   +  + 
Sbjct: 216 QLVIPKIYWDLTNSKILVLEWLEGKQILEADVSRPPTE-QAISQRKSEITRILFRSFFQQ 274

Query: 448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF 507
           + +D F HAD HPGNI              +     V  +D GM   L    +  L E  
Sbjct: 275 IYIDGFFHADPHPGNI-------------FYLDDGRVALIDCGMVGRLDPQTQQILTELL 321

Query: 508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIE-EVD--EAFAFWGTPEGDLVHPAECMQQ 564
            A+   D +  ++ T++LS+      P   ++ EVD       +     + ++ +E + +
Sbjct: 322 LAIVDLDAKRCSQLTIKLSE---SVVPITLVQLEVDYERMLRKYYNLNLNQINFSEVVYE 378

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           LL+  RR+R+ + GN+     +   LEG  RK +P  N+++ ++ LL
Sbjct: 379 LLQIARRNRIKLPGNLGLFAKSLANLEGTARKFNPDINILEEVKPLL 425


>gi|262273229|ref|ZP_06051045.1| ubiquinone biosynthesis monooxygenase UbiB [Grimontia hollisae CIP
           101886]
 gi|262222807|gb|EEY74116.1| ubiquinone biosynthesis monooxygenase UbiB [Grimontia hollisae CIP
           101886]
          Length = 544

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 178/401 (44%), Gaps = 34/401 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP +IK+GQ  +TR DLFP  +  +L+ L  +         K  +E+A G  L   
Sbjct: 61  LQELGPVWIKFGQMMSTRRDLFPPAIADQLAMLQDQVEPFDGKLAKAQMEKALGGPLENW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           FD F E P+AS SIAQVH A+L+    G++     V +KV  P +   I+ D  ++   A
Sbjct: 121 FDNFSETPLASASIAQVHTATLKEN--GRE-----VVLKVIRPDILPVIQADIKLMYRMA 173

Query: 344 KI-SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           +I +  +P  + L+  E V+++   ++ ++DL REAA+  +   NF     +  P+    
Sbjct: 174 RIVARFLPEARRLKPVEVVREYEKTLLDELDLMREAANAIQLRRNFENDHILYVPEVFSD 233

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
               +++V     G  VS  ++ L+ +      LA  G       +  D+F HADMHPGN
Sbjct: 234 YCRQSLMVSERIYGIQVSD-IEGLKANGTDLKLLAERGVQVFFTQVFRDSFFHADMHPGN 292

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           + V     K          P  I LD G+   L++ D+  L E F A   RD R  AE  
Sbjct: 293 VFVSYDHPKD---------PQWIGLDCGIVGTLNREDKRYLAENFLAFFNRDYRKVAELH 343

Query: 523 LRLSKQQNCPNPKAFIEEVDE-AFAFWGTPEGDLVHP------AECMQQLLEKVRRHRVN 575
           +      +  N       VDE  FA     E     P         +  L    RR  + 
Sbjct: 344 VDSGWVPHDTN-------VDEFEFAIRTVCEPIFEKPLCEISFGHVLLNLFNTARRFNME 396

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADW 616
           V   +  +  T L +EG  R+L P  ++ DT +  L   DW
Sbjct: 397 VQPQLVLLQKTLLYVEGLGRQLYPQLDLWDTAKPFL--EDW 435


>gi|406675096|ref|ZP_11082286.1| 2-polyprenylphenol 6-hydroxylase [Aeromonas veronii AMC35]
 gi|404627866|gb|EKB24655.1| 2-polyprenylphenol 6-hydroxylase [Aeromonas veronii AMC35]
          Length = 546

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 177/395 (44%), Gaps = 30/395 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
            E  GP FIK+GQ  +TR DL P D+ ++L+ L  + P       ++ IE + G  +  +
Sbjct: 61  FEALGPIFIKFGQMLSTRRDLLPPDIAEELALLQDRVPPFCGQAARQQIELSLGCPIETL 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-LA 342
           FD F+E P+AS SIAQVH A  R +  G++     + +KV  P +   I  D  ++  LA
Sbjct: 121 FDDFDETPLASASIAQVHTA--RLKESGRE-----IVIKVIRPDIEPVIEADLRLMQALA 173

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             ++  +P    LR  E V+++   ++ +++L REAA+  +   NF   + +  P+ +  
Sbjct: 174 RLVARFVPQSARLRPIEVVEEYRKTILDELNLMREAANAIQLRRNFTGSEALYVPEIITD 233

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
           L    VLV     G  VS  +  L+ +      LA  G       +  D+F HADMHPGN
Sbjct: 234 LCREQVLVMERIYGIPVSD-IPALEANGTNMKLLAERGVEVFFTQVFRDSFFHADMHPGN 292

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V     ++         P  I +D G+   L++ D+  L E F A   RD R  AE  
Sbjct: 293 IFVSYEHPEN---------PLWIGIDCGIVGTLNREDKRYLAENFLAFFNRDYRRVAE-- 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP------AECMQQLLEKVRRHRVNV 576
             L  +         ++E +  FA     E     P         +  L    RR  + V
Sbjct: 342 --LHVESGWVPADTKVDEFE--FAIRTVLEPIFEKPLSEISFGHVLLNLFNTARRFHMTV 397

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R+L P  ++  T +  L
Sbjct: 398 QPQLVLLQKTLLYVEGLGRQLYPQLDLWQTAKPFL 432


>gi|414071823|ref|ZP_11407783.1| ubiquinone biosynthesis protein UbiB [Pseudoalteromonas sp.
           Bsw20308]
 gi|410805739|gb|EKS11745.1| ubiquinone biosynthesis protein UbiB [Pseudoalteromonas sp.
           Bsw20308]
          Length = 533

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 172/403 (42%), Gaps = 30/403 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSE 282
           L+  GP +IK+GQ  +TR DL P D+  +L+ L  +         ++ IE+A     +SE
Sbjct: 58  LQELGPVWIKFGQMLSTRRDLLPHDIALELAFLQDQVQPFEGELAQEIIEKALEINDISE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F +AP+AS SIAQVH A L   +  ++     V +KV  P + E I  D  ++   
Sbjct: 118 LFSEFSQAPLASASIAQVHTAKLIDEHNIEQ----DVVIKVIRPNIHEQINADLALMEKL 173

Query: 343 AKI-SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AK+ + V    K LR  E V+++   ++ ++DL RE A+  +   NF     +  P    
Sbjct: 174 AKVLAKVHNESKRLRPVEVVKEYKKTLLDELDLMREGANGIQLKRNFEDSDSLYIPAVYS 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 +LV     G  VS   D L         LA  G       +  D+F HADMHPG
Sbjct: 234 DYSRHNILVMERIYGIPVSD-TDALLAQNTNMKLLAERGVEVFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V          R     P  I +D G+   L+K D+  L E F A   RD R  A+ 
Sbjct: 293 NIFV---------SREHPENPKYIGIDCGIVGTLNKEDKRYLAENFIAFFNRDYRQVAQ- 342

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP------AECMQQLLEKVRRHRVN 575
              L        P   IEE +  FA     E     P         +  L    RR  + 
Sbjct: 343 ---LHVDSGWVPPDTSIEEFE--FAIRTVCEPIFNKPLAEISFGHVLVNLFNTARRFNMQ 397

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAK 618
           V   +  +  T L +EG  R+L P  ++  T +  L   DW K
Sbjct: 398 VQPQLVLLQKTLLYVEGLGRQLYPQLDLWKTAKPFL--EDWVK 438


>gi|427731874|ref|YP_007078111.1| putative unusual protein kinase [Nostoc sp. PCC 7524]
 gi|427367793|gb|AFY50514.1| putative unusual protein kinase [Nostoc sp. PCC 7524]
          Length = 561

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 167/392 (42%), Gaps = 27/392 (6%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           +  TL   GP FIK GQ  +TR D+FP +  ++L++L  K P  S+   +K +E+  G++
Sbjct: 66  IRNTLLDLGPTFIKVGQLFSTRADIFPSEYVEELAKLQDKVPAFSYEQVEKIVEQELGKK 125

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           + E+F  FE  P+A+ S+ QVH+A L   + G+      V VKV+ PG+ +    D  I+
Sbjct: 126 IPELFLSFEPIPLAAASLGQVHKAVL---HNGES-----VVVKVQRPGLKKLFEIDLEIL 177

Query: 340 NLAAKISSVIPAVKWLRLDESV---QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF 396
              A+     P  KW +  + +   ++    +  ++D   E  +   F  NFR +  V  
Sbjct: 178 KGIARYFQNHP--KWGQGRDWIGIYEECCRILWEEIDYLNEGRNADTFRRNFRAYDWVKV 235

Query: 397 PKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHA 456
           PK  +    P VL   Y  G  +S+Y + L+     + A+A  G  A L  LL D F HA
Sbjct: 236 PKVYWRYASPRVLTLEYLPGIKISQY-EALEAAGIDRKAIARQGAQAYLLQLLNDGFFHA 294

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           D HPGNI V                  +IF D GM   +    R  L+E    +A+++G 
Sbjct: 295 DPHPGNIAV-------------SPDGSLIFYDFGMMGRIKSNVREGLMETLFGIAQKNGD 341

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNV 576
              +  + L       +       V      +     +    A     L E         
Sbjct: 342 RVVQSLIDLGAIAPVDDMGPVRRSVQYMLDNFMDKPFEAQSVAAISDDLYEIAYNQPFRF 401

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
                 VM     LEG  + LDP +N M+  Q
Sbjct: 402 PATFTFVMRAFSTLEGVGKGLDPEFNFMEVAQ 433


>gi|425472767|ref|ZP_18851608.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
 gi|389881071|emb|CCI38343.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
          Length = 549

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 190/407 (46%), Gaps = 38/407 (9%)

Query: 218 HVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG 277
            V+ + L   GP ++K GQ  +TRPDL P +    L+ L ++ P  ++   +  I     
Sbjct: 44  EVLKKILVELGPFYVKLGQLLSTRPDLLPANYIDALTALQAQVPPVAWTDIEIVITEQLA 103

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
           + + ++F      P+A+GSI Q+HRA+L     G++     VA+KV  PG+ + + +D  
Sbjct: 104 KPIKQVFKYINPQPIAAGSIGQIHRATL---LSGEE-----VAIKVLRPGIEKIVAQDSA 155

Query: 338 IINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF--RRW---K 392
           +I + A + ++    +   +    ++F   + +++D  +E  +  +  YN    RW   K
Sbjct: 156 LIKVIADLVALTEFGQSYDVVNLAEEFIKAVNAELDFTQEGHYTDQLRYNLTQSRWSEPK 215

Query: 393 DVSFPKPVYPLVHPAVLVETYEQGEC-----VSRYVDELQGHERLKSALAHIGTHALLKM 447
            +  PK  + L +  +LV  + +G+      VSR   E Q   + KS +  I   +  + 
Sbjct: 216 QLVIPKIYWHLTNSKLLVLEWLEGKQILEADVSRPPTE-QAISQRKSEITRILFRSFFQQ 274

Query: 448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF 507
           + +D F HAD HPGNI              +     V  +D GM   L    +  L E  
Sbjct: 275 IYIDGFFHADPHPGNI-------------FYLDDGRVALIDCGMVGRLDPQTQQILTELL 321

Query: 508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIE-EVD--EAFAFWGTPEGDLVHPAECMQQ 564
            A+   D +  ++ T++LS+      P   ++ EVD       +     + ++ +E + +
Sbjct: 322 LAIVDLDAKRCSQLTIKLSE---SVVPITLVQLEVDYERMLRKYYNLNLNQINFSEVVYE 378

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           LL+  RR+R+ + GN+     +   LEG  RK +P  N+++ ++ LL
Sbjct: 379 LLQIARRNRIKLPGNLGLFAKSLANLEGTARKFNPDINILEEVKPLL 425


>gi|330831683|ref|YP_004394635.1| Ubiquinone biosynthesis monooxygenase UbiB [Aeromonas veronii B565]
 gi|423203017|ref|ZP_17189595.1| 2-polyprenylphenol 6-hydroxylase [Aeromonas veronii AER39]
 gi|423211674|ref|ZP_17198207.1| 2-polyprenylphenol 6-hydroxylase [Aeromonas veronii AER397]
 gi|328806819|gb|AEB52018.1| Ubiquinone biosynthesis monooxygenase UbiB [Aeromonas veronii B565]
 gi|404613173|gb|EKB10208.1| 2-polyprenylphenol 6-hydroxylase [Aeromonas veronii AER397]
 gi|404613660|gb|EKB10679.1| 2-polyprenylphenol 6-hydroxylase [Aeromonas veronii AER39]
          Length = 546

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 177/395 (44%), Gaps = 30/395 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
            E  GP FIK+GQ  +TR DL P D+ ++L+ L  + P       ++ IE + G  +  +
Sbjct: 61  FEALGPIFIKFGQMLSTRRDLLPPDIAEELALLQDRVPPFCGQAARQQIELSLGCPIETL 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-LA 342
           FD F+E P+AS SIAQVH A  R +  G++     + +KV  P +   I  D  ++  LA
Sbjct: 121 FDDFDETPLASASIAQVHTA--RLKESGRE-----IVIKVIRPDIEPVIEADLRLMQALA 173

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             ++  +P    LR  E V+++   ++ +++L REAA+  +   NF   + +  P+ +  
Sbjct: 174 RLVARFVPQSARLRPIEVVEEYRKTILDELNLMREAANAIQLRRNFTGSEALYVPEIITD 233

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
           L    VLV     G  VS  +  L+ +      LA  G       +  D+F HADMHPGN
Sbjct: 234 LCREQVLVMERIYGIPVSD-IPALEANGTNMKLLAERGVEVFFTQVFRDSFFHADMHPGN 292

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V     ++         P  I +D G+   L++ D+  L E F A   RD R  AE  
Sbjct: 293 IFVSYEHPEN---------PLWIGIDCGIVGTLNREDKRYLAENFLAFFNRDYRRVAE-- 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP------AECMQQLLEKVRRHRVNV 576
             L  +         ++E +  FA     E     P         +  L    RR  + V
Sbjct: 342 --LHVESGWVPADTKVDEFE--FAIRTVLEPIFEKPLSEISFGHVLLNLFNTARRFHMTV 397

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R+L P  ++  T +  L
Sbjct: 398 QPQLVLLQKTLLYVEGLGRQLYPQLDLWQTAKPFL 432


>gi|302880099|ref|YP_003848663.1| 2-polyprenylphenol 6-hydroxylase [Gallionella capsiferriformans
           ES-2]
 gi|302582888|gb|ADL56899.1| 2-polyprenylphenol 6-hydroxylase [Gallionella capsiferriformans
           ES-2]
          Length = 504

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 178/394 (45%), Gaps = 43/394 (10%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR DL P DL  +L++L  + P  S       +E  + R L ++
Sbjct: 56  LEKLGPIFVKFGQMLSTRRDLMPTDLADELAKLQDQVPPFSSQLAVSLLETTYKRPLQDV 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  FE+ PVAS S+AQVH   L   + G++     VAVK+  PG+  +I  D  +I +AA
Sbjct: 116 FKSFEQTPVASASVAQVHFGVL---HDGRE-----VAVKILRPGIALTIAHDIALIKVAA 167

Query: 344 KISSVIPAVKWLRLD-------ESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF 396
            +      ++WL  D         +++F   +  ++DL REAA+ S+   NF     +  
Sbjct: 168 DL------IEWLWADGRRLKPRRVIEEFEKHLSDELDLTREAANGSQLRRNFADSGLLLV 221

Query: 397 PKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHA 456
           P+  +      V+V     G  +S+ VD L+        LA  G       +  D F HA
Sbjct: 222 PEMFWDYCTNDVMVMERMYGMPISQ-VDNLRAAGVDIPKLAANGVEIFYTQVFRDGFFHA 280

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           DMHPGN  V+VA+               I LD G+   L+  D+  L + F A  +RD +
Sbjct: 281 DMHPGN--VQVAKDG-----------RYIALDFGIMGTLTDIDKNYLAQNFIAFFQRDYK 327

Query: 517 TAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRH 572
             AE  +    +         ++E++ A      P  D     V     + +L +  RR 
Sbjct: 328 RVAEVHI----ESGWAPANTRVDELESAIRAVCEPIFDRPLREVSFGRVLLRLFQTSRRF 383

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
            + +   +  +  T L +EG   +LDP  ++  T
Sbjct: 384 GIEIQPQLVLLQKTLLNIEGLGLQLDPELDLWKT 417


>gi|423204704|ref|ZP_17191260.1| 2-polyprenylphenol 6-hydroxylase [Aeromonas veronii AMC34]
 gi|404625801|gb|EKB22614.1| 2-polyprenylphenol 6-hydroxylase [Aeromonas veronii AMC34]
          Length = 546

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 177/395 (44%), Gaps = 30/395 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
            E  GP FIK+GQ  +TR DL P D+ ++L+ L  + P       ++ IE + G  +  +
Sbjct: 61  FEALGPIFIKFGQMLSTRRDLLPPDIAEELALLQDRVPPFCGQAARQQIELSLGCPIETL 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-LA 342
           FD F+E P+AS SIAQVH A  R +  G++     + +KV  P +   I  D  ++  LA
Sbjct: 121 FDDFDETPLASASIAQVHTA--RLKESGRE-----IVIKVIRPDIEPVIEADLRLMQALA 173

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             ++  +P    LR  E V+++   ++ +++L REAA+  +   NF   + +  P+ +  
Sbjct: 174 RLVARFVPQSARLRPIEVVEEYRKTILDELNLMREAANAIQLRRNFTGSEALYVPEIITD 233

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
           L    VLV     G  VS  +  L+ +      LA  G       +  D+F HADMHPGN
Sbjct: 234 LCREQVLVMERIYGIPVSD-IPALEANGTNMKLLAERGVEVFFTQVFRDSFFHADMHPGN 292

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V     ++         P  I +D G+   L++ D+  L E F A   RD R  AE  
Sbjct: 293 IFVSYEHPEN---------PLWIGIDCGIVGTLNREDKRYLAENFLAFFNRDYRRVAE-- 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP------AECMQQLLEKVRRHRVNV 576
             L  +         ++E +  FA     E     P         +  L    RR  + V
Sbjct: 342 --LHVESGWVPADTKVDEFE--FAIRTVLEPIFEKPLSEISFGHVLLNLFNTARRFHMTV 397

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
              +  +  T L +EG  R+L P  ++  T +  L
Sbjct: 398 QPQLVLLQKTLLYVEGLGRQLYPQLDLWQTAKPFL 432


>gi|119944106|ref|YP_941786.1| 2-polyprenylphenol 6-hydroxylase [Psychromonas ingrahamii 37]
 gi|119862710|gb|ABM02187.1| 2-octaprenylphenol hydroxylase [Psychromonas ingrahamii 37]
          Length = 546

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 180/406 (44%), Gaps = 36/406 (8%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           +L++ GP +IK GQ  +TR DL P     +L+ L    P        + IE++F + +  
Sbjct: 61  SLQSLGPIYIKLGQMLSTRRDLLPPIYADQLAYLQDNVPPFCGEQAIEQIEKSFNKPIDS 120

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
           IFD F++  +AS SIAQVH A+L       K     V VKV  PG+ + I+ D  ++  L
Sbjct: 121 IFDDFDKVALASASIAQVHTATL-------KEDGRAVVVKVTRPGIEKRIQADLQLMKWL 173

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK--P 399
           A+ +   +   + LR  E + ++   ++ ++DL RE A+  +   NF   K +  P+  P
Sbjct: 174 ASLMQRFLKEAERLRPVEVIHEYEKTIIDEIDLMREGANTIQLRRNFLNSKLLYVPEIYP 233

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
            Y   +  V+   Y  G  VS   + LQ        LA  G       +  D+F HADMH
Sbjct: 234 NYCTKNALVMERIY--GIPVSD-TNALQAQNTNLKLLAERGVETFFTQVFRDSFFHADMH 290

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGN+ V     +          P  I +D G+   L+K D+  L E F A   RD R  A
Sbjct: 291 PGNVFVSYEHPED---------PLWIGIDCGIMGTLNKEDKRYLAENFLAFFNRDYRQVA 341

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP------AECMQQLLEKVRRHR 573
           +  +  S       P   +EE +  F+     E     P      A+ +  L    RR+ 
Sbjct: 342 QLHVD-SGWVPADTP---VEEFE--FSIRAVCEPIFEKPLAEISFAQVLINLFNTARRYN 395

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
           + V   +  +  T   +EG  R+L P  ++ DT +  L   +W K 
Sbjct: 396 MKVQPQLVLLQKTLFYVEGLGRQLYPQLDLWDTAKPFL--ENWMKE 439


>gi|390438444|ref|ZP_10226909.1| putative aminotransferase class-III [Microcystis sp. T1-4]
 gi|389838133|emb|CCI31033.1| putative aminotransferase class-III [Microcystis sp. T1-4]
          Length = 873

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 179/401 (44%), Gaps = 41/401 (10%)

Query: 213 RELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTI 272
           +EL   ++   L + GP +IK GQ  ATR DL    + ++L  L    P  + A TKK I
Sbjct: 33  KELQGEILSEYLISMGPIYIKIGQILATRSDLISNTIAERLRRLQDNVPTMNEADTKKII 92

Query: 273 ERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESI 332
           ER   + +  IF  F  +PVAS SIAQVH+A L+    GQK     VAVK+    V   +
Sbjct: 93  ERELKQPIEAIFKDFYFSPVASASIAQVHQAKLK---TGQK-----VAVKIVKKNVRRDL 144

Query: 333 RRDFVIINLAAKI-SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRW 391
           + +  ++    KI  S+IP+VK L L    ++ +  +++Q D  +EA   +R   NF+  
Sbjct: 145 QENLKVMGFVVKIVDSLIPSVKSLNLPIRFRELSRLLIAQTDFIQEAEKQARIYLNFKN- 203

Query: 392 KDVSFPKPVYPLVH-PAVLVETYEQGECVSRYVDELQGHERLK-----SALAHIGTHALL 445
                    +P V  P+++ E       V  +++ + G E  +       LA      + 
Sbjct: 204 ---------HPYVRVPSLVPELCTNNMLVMEFIEGIPGKESERCHLPPQPLARRFQETIY 254

Query: 446 KMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVE 505
            ML +D   H D HPGN+              F     +I +D G+T ELS+ ++  L  
Sbjct: 255 TMLYLDGICHGDPHPGNL-------------FFTEDGKIILVDFGITVELSEDEKWGLSS 301

Query: 506 FFKAVARRDGRTAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECM 562
           F+ A  R++   A E       + K+Q       + +E++         + +        
Sbjct: 302 FYYACTRKEWELAVERFTEHFVIKKEQVFERWSDYHQEIEAVLIKHFNAQTERWSTISYF 361

Query: 563 QQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           Q + + ++R++     N   V +  L  EG+  ++DP  ++
Sbjct: 362 QDVNQVLKRYQAEYTTNFTKVELVFLSCEGFASQIDPEIDI 402


>gi|359454336|ref|ZP_09243621.1| probable ubiquinone biosynthesis protein UbiB [Pseudoalteromonas
           sp. BSi20495]
 gi|358048628|dbj|GAA79870.1| probable ubiquinone biosynthesis protein UbiB [Pseudoalteromonas
           sp. BSi20495]
          Length = 533

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 172/403 (42%), Gaps = 30/403 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSE 282
           L+  GP +IK+GQ  +TR DL P D+  +L+ L  +         ++ IE+A     +SE
Sbjct: 58  LQELGPVWIKFGQMLSTRRDLLPHDIALELAFLQDQVQPFEGELAQEIIEKALEINDISE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F +AP+AS SIAQVH A L   +  ++     V +KV  P + E I  D  ++   
Sbjct: 118 LFSEFSQAPLASASIAQVHTAKLIDEHNIEQ----DVVIKVIRPNIHEQINADLALMEKL 173

Query: 343 AKI-SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AK+ + V    K LR  E V+++   ++ ++DL RE A+  +   NF     +  P    
Sbjct: 174 AKVLAKVHNESKRLRPVEVVKEYKKTLLDELDLMREGANGIQLKRNFEGSDSLYIPAVYS 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VLV     G  VS   D L         LA  G       +  D+F HADMHPG
Sbjct: 234 DYSRHNVLVMERIYGIPVSD-TDALLAQNTNMKLLAERGVEVFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V          R     P  I +D G+   L+K D+  L E F A   RD R  A+ 
Sbjct: 293 NIFV---------SREHPENPKYIGIDCGIVGTLNKEDKRYLAENFIAFFNRDYRQVAQ- 342

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP------AECMQQLLEKVRRHRVN 575
              L        P   IEE +  FA     E     P         +  L    RR  + 
Sbjct: 343 ---LHVDSGWVPPDTSIEEFE--FAIRTVCEPIFNKPLAEISFGHVLVNLFNTARRFNMQ 397

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAK 618
           V   +  +  T L +EG  R+L P  ++  T +  L   DW K
Sbjct: 398 VQPQLVLLQKTLLYVEGLGRQLYPQLDLWKTAKPFL--EDWVK 438


>gi|395647783|ref|ZP_10435633.1| putative ubiquinone biosynthesis-like protein [Pseudomonas
           extremaustralis 14-3 substr. 14-3b]
          Length = 534

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 176/392 (44%), Gaps = 25/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP FIK+GQ  +TR DL P D+  +L  L  + P      + + IE   G+++SE+
Sbjct: 63  LQDLGPIFIKFGQILSTRRDLLPEDIADELMLLQDRVPPFDSQQSMRLIEEQLGKKISEV 122

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + A
Sbjct: 123 FSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPIIGQDLAWLFILA 174

Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           + +    A  + L   + V  +   +  ++DL REAA+ S+ + NF     +  P+  + 
Sbjct: 175 RAAERFSADARLLHPVDVVADYEKTIYDELDLLREAANASQLMRNFEGSPLLYVPQVYWD 234

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
              P VLV     G  V+           +K  LA  G       +  D+F HADMHPGN
Sbjct: 235 WCRPKVLVMERIYGVQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPGN 293

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V      S         P  I +D G+   L+  D+  L     A  +RD R  A+  
Sbjct: 294 IFVSTINPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLH 344

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V   
Sbjct: 345 IDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQPQ 401

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 402 LVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|317046418|ref|YP_004114066.1| 2-polyprenylphenol 6-hydroxylase [Pantoea sp. At-9b]
 gi|316948035|gb|ADU67510.1| 2-polyprenylphenol 6-hydroxylase [Pantoea sp. At-9b]
          Length = 545

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 178/403 (44%), Gaps = 32/403 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           +E  GP +IK+GQ  +TR DLFP  +  +L+ L  +         K  IE++ G  +   
Sbjct: 61  MELLGPVWIKFGQMLSTRRDLFPPAIADELAILQDRVAPFDGVKAKAQIEKSIGGPVETW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           FD FE  P+AS SIAQVH A+L+    G++     V +KV  P +   I+ D  +I  LA
Sbjct: 121 FDDFEITPLASASIAQVHTATLKEN--GRE-----VVIKVIRPDILPVIKADMKLIYRLA 173

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  ++P  + LR  E V+ +   ++ +++L REAA+  +   NF + + +  P+    
Sbjct: 174 RWVPRLLPDGRRLRPLEVVRDYEKTLIDELNLLREAANAIQLRRNFDQSRMLYVPEIFSD 233

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
               ++LV     G  +S  V  L+ H      LA  G       +  D+F HADMHPGN
Sbjct: 234 YCSESMLVMERIYGIPISD-VATLEQHGVNMKLLAERGVQVFFTQVFRDSFFHADMHPGN 292

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V     +          P  I +D G+   L+K D+  L E F A   RD R  AE  
Sbjct: 293 IFVSYDHPED---------PQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE-- 341

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP------AECMQQLLEKVRRHRVNV 576
             L        P   +E+ +  FA     E     P         +  L    RR  + V
Sbjct: 342 --LHVDSGWVPPDTNVEDFE--FAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEV 397

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
              +  +  T L +EG  R+L P  ++  T +  L   DW K 
Sbjct: 398 QPQLVLLQKTLLYIEGIGRQLYPQLDLWKTAKPFL--EDWIKD 438


>gi|424863875|ref|ZP_18287787.1| putative ubiquinone biosynthesis protein UbiB [SAR86 cluster
           bacterium SAR86A]
 gi|400757196|gb|EJP71408.1| putative ubiquinone biosynthesis protein UbiB [SAR86 cluster
           bacterium SAR86A]
          Length = 493

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 152/298 (51%), Gaps = 21/298 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F K+GQ  +TR D+   +  K+L  L       + +  KK IE+    ++  I
Sbjct: 35  LESLGPIFTKFGQLLSTRTDVLDYETAKELESLTDSCKPFNVSQLKKIIEKELNDKIENI 94

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F+ F++ P+A+ S+AQVH A L+    GQ      V +KV  P +   ++++  ++  AA
Sbjct: 95  FEYFDDEPLAAASLAQVHSARLK---TGQD-----VVIKVLRPNIERKVKKNLRLLKSAA 146

Query: 344 KISSVIPAVKW-LRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           KI S +    + L+ +E V+ +   ++ ++DL  EA++ +    NF   +++  P+  + 
Sbjct: 147 KIFSYVYKESYRLKPNEVVKDYESTILKELDLKLEASNTNLTRKNFLDSEELYIPEVYWD 206

Query: 403 LVHPAVLV-ETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
           L    V+V E  +   C    +D+++ +   K  LA  G    L  +  DNF HADMHPG
Sbjct: 207 LTTSNVMVLEKIDGIPCTD--IDQIESYGIDKKTLAENGVMIFLNQVFRDNFFHADMHPG 264

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           NI V    K++ +      KP  I +D  +T  LS  +R  L    +AV +++ ++ A
Sbjct: 265 NIFV---SKENPE------KPGYIAVDCAITGSLSNDERYTLARMLQAVLKQNYKSLA 313


>gi|425897083|ref|ZP_18873674.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas chlororaphis subsp.
           aureofaciens 30-84]
 gi|397884001|gb|EJL00487.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas chlororaphis subsp.
           aureofaciens 30-84]
          Length = 534

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 176/393 (44%), Gaps = 25/393 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L  L  + P      +   IE   G+++SE
Sbjct: 62  ALQDLGPIFIKFGQILSTRRDLLPEDIADELMLLQDRVPPFDSKKSVALIEEQLGKKISE 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + 
Sbjct: 122 VFSRFDIEPLASASVAQVHAAQLK---SGEE-----VVVKVIRPGLKPVIAQDLAWLFIL 173

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ +  + A  + L   + V  +   +  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 174 ARAAEKVSADARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  V+           +K  LA  G       +  D+F HADMHPG
Sbjct: 234 DWCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V   Q  S         P  I +D G+   L+  D+  L     A  +RD R  A+ 
Sbjct: 293 NIFVSTVQPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQL 343

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V  
Sbjct: 344 HIDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQP 400

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 401 QLVLLQKTLLNIEGLGRQLYPELDLWNTAQPFL 433


>gi|220905668|ref|YP_002480979.1| ABC transporter [Cyanothece sp. PCC 7425]
 gi|219862279|gb|ACL42618.1| ABC-1 domain protein [Cyanothece sp. PCC 7425]
          Length = 571

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 167/395 (42%), Gaps = 39/395 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V  T    GP FIK GQ  +TR DLFP +  ++L++L  K P  ++   +  I + FG+ 
Sbjct: 74  VRETFLDLGPTFIKVGQLFSTRADLFPAEYVEELTKLQDKVPAFAYEQIEAIILQDFGKT 133

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           + E++  F+  P+A+ S+ QVH+A L   + G++     V VKV+ PG+ +  R D  I+
Sbjct: 134 IPELYRSFDPIPLAAASLGQVHKAQL---HSGEE-----VVVKVQRPGLKQLFRIDLAIL 185

Query: 340 N----LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVS 395
                         P   WL + E   +    +  ++D   E  +   F  NFR +    
Sbjct: 186 KGITYYFQNHPDWGPGRDWLGIYEECCR---ILYEEIDYLNEGQNADTFRRNFREFAWAC 242

Query: 396 FPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIH 455
            P+  +    P VL   Y  G  +S Y + L+     +  LA +G  A L  LL D F H
Sbjct: 243 VPRVYWRYSSPRVLTLEYLPGIKISHY-EALEAAGLDRKELAQLGAKAYLHQLLNDGFFH 301

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
           AD HPGNI V               +  +IF D GM   +    R  LV  F  +ARRDG
Sbjct: 302 ADPHPGNIAV-------------SPEGGLIFYDFGMMGRVQPITREKLVRTFMGIARRDG 348

Query: 516 RTAAECTLRLSK----QQNCPNPKAFIEEVDEAFAFWGTP-EGDLVHPAECMQQLLEKVR 570
           +      + L      +   P  ++    +D    F   P E   V  A+    L +   
Sbjct: 349 QMVMNALVDLGALAPVEDMGPVRRSIQYMLDN---FMDQPFESQSV--AQISDDLYDIAY 403

Query: 571 RHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMD 605
                       VM     LEG  + LDP +N M+
Sbjct: 404 NQPFRFPATFTFVMRAFSTLEGVGKGLDPDFNFME 438


>gi|118603026|ref|YP_904241.1| 2-polyprenylphenol 6-hydroxylase [Candidatus Ruthia magnifica str.
           Cm (Calyptogena magnifica)]
 gi|118567965|gb|ABL02770.1| 2-polyprenylphenol 6-hydroxylase [Candidatus Ruthia magnifica str.
           Cm (Calyptogena magnifica)]
          Length = 534

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 183/392 (46%), Gaps = 30/392 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK+GQ  +TR DL P D+  +L++L    P       K+ IE++ G  +  +
Sbjct: 59  LEELGPIFIKFGQTLSTRRDLLPEDIGDELAKLQDNCPAFDSIKAKQIIEQSLGAPVENL 118

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  P+AS SIAQVH A     +         VAVKV  P + + IRRD  ++   A
Sbjct: 119 FKRFDIKPLASASIAQVHTALTNNNHE--------VAVKVVRPDIKKVIRRDIKLMYALA 170

Query: 344 KISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP- 402
           ++ +  P  K LR  E V +F   +++++D+  EA +  +   NF+    +  PK +YP 
Sbjct: 171 RLFNKHPISKKLRPIEVVSEFEGIILNELDMRIEAKNCEKIGKNFKNSNLLYIPK-IYPD 229

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
           L H  +L      G  V   + +L+ +      LA  G       +   NF HADMHPGN
Sbjct: 230 LCHKNILTTERIYGIPVGD-IKQLKANHIDMKRLAEKGVIIFFTQVFKHNFFHADMHPGN 288

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V              +    I +D G+ + L++ D+  L   F A   +D +  A+  
Sbjct: 289 IFV-------------NTNGQYIGVDFGIMSTLTEADKDFLANIFLAFFNQDYKKVAQTY 335

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    ++   N  + +A I+ + E    +  P G++    + + +L+++ +   + +   
Sbjct: 336 IDSGWINPTTNISSFQAAIKRICE--PMFEKPLGEISF-GQVLFELIQEAKNFDITIQPQ 392

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L P  ++  T +  L
Sbjct: 393 LLLLDKTLLNIEGLGRQLYPQLDLWTTAKPFL 424


>gi|330838654|ref|YP_004413234.1| ABC-1 domain-containing protein [Selenomonas sputigena ATCC 35185]
 gi|402834801|ref|ZP_10883393.1| ABC1 family protein [Selenomonas sp. CM52]
 gi|329746418|gb|AEB99774.1| ABC-1 domain-containing protein [Selenomonas sputigena ATCC 35185]
 gi|402276991|gb|EJU26085.1| ABC1 family protein [Selenomonas sp. CM52]
          Length = 535

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 175/388 (45%), Gaps = 30/388 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  + RPD  P++ C +L +L ++A    F+  +K IE+ + RR + I
Sbjct: 46  LEDLGPTFVKLGQIMSMRPDFLPQEYCDELMKLQTEANPLPFSVIEKVIEQEYQRRWTRI 105

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F   +E  + S SIAQVH A L     G+K     V +KV+ PGV + + +D V++  AA
Sbjct: 106 FRSIDEEALGSASIAQVHCAVL---LDGEK-----VVIKVQRPGVHDIMSKDIVLLKRAA 157

Query: 344 KISSVI-PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
            I  ++ PA   +     + +       ++D   EA H+  F +  +    VS PK    
Sbjct: 158 GILKILGPAQDVVDFSMVLDELWAIAKQEMDFVMEANHIEEFRHANQDADFVSCPKVYRH 217

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGT---HALLKMLLVDNFIHADMH 459
           L    VLV  Y  G      +D++ G +        IG       +K ++ D + HAD H
Sbjct: 218 LTTQHVLVMEYVDG----IQIDDVAGLKAAGIDARRIGERLGENYVKQIVEDGYFHADPH 273

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGNI VR  +              +++LD+GM   LS  DR  + +   A+A+ D     
Sbjct: 274 PGNIWVRGGK--------------IVWLDLGMMGRLSNKDRAAIRKAIFALAQHDVFEMK 319

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
              L L   Q   +     +++D   A +G  +   +      +Q++  +R H + +   
Sbjct: 320 AAVLSLGVPQERIDHARLYQDIDALIAQYGDLDFRSLKMGILSRQIMNVLRSHHIAIAPG 379

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
           +       + +EG  R + P  + ++ L
Sbjct: 380 ISMFCRGVMTIEGVMRLVCPEVSFVEIL 407


>gi|218281135|ref|ZP_03487670.1| hypothetical protein EUBIFOR_00231 [Eubacterium biforme DSM 3989]
 gi|218217649|gb|EEC91187.1| hypothetical protein EUBIFOR_00231 [Eubacterium biforme DSM 3989]
          Length = 531

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 186/405 (45%), Gaps = 35/405 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  +TR DLF +  CK+L +L S      F+  ++ I+  +G    E 
Sbjct: 38  LEDLGPTFVKIGQIMSTRQDLFSQRYCKELMKLRSHVTPMPFSMVEQIIQDTYGDLFHEE 97

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F+  +E  + S SIAQVH A+L+ +          V +K++ P + E + RD  ++  A 
Sbjct: 98  FESIDEICLGSASIAQVHAATLKTKER--------VVLKIQRPKIYEWMERDVALLRKAV 149

Query: 344 KI---SSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           KI   S ++ +V  + LD  + +F      ++D   EA    RF   ++  K +  PK  
Sbjct: 150 KILNLSDIVSSV--VDLDMVIDEFWYTAKQEMDFTIEAQFAKRFKNEYKDCKFIDAPKIY 207

Query: 401 YPLVHPAVLVETYEQGECV--SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADM 458
                  +LV  Y  G  +  S+ +DEL G++R  S +A       +  ++ + F HAD 
Sbjct: 208 DEYTRKNILVMEYVDGVEITDSKKLDEL-GYDR--SEIADKLAFNYISQIIENGFFHADP 264

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           H GN+ +R  Q              ++++D GM   L   +R  +    +A+A +D +  
Sbjct: 265 HSGNLRIRDNQ--------------IVWIDFGMMGILDANERETMKSAVRAIALKDTQKL 310

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +C L +   +   +  AF  ++D+    + +     +  A+ +Q +      + +++  
Sbjct: 311 VDCILMIGDCKKEIDYSAFCNDMDKFVNQYLSVPYAQIDVAKLVQDMFSICHVYSISLPK 370

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMD---TLQTLLLKADWAKSL 620
            +  +  + + +EG    LDP  N M    + ++ L + DW K +
Sbjct: 371 GISMLARSMMTIEGTLTALDPNMNTMKIAMSHKSSLTQIDWQKEI 415


>gi|424666606|ref|ZP_18103632.1| 2-polyprenylphenol 6-hydroxylase [Stenotrophomonas maltophilia
           Ab55555]
 gi|401070052|gb|EJP78570.1| 2-polyprenylphenol 6-hydroxylase [Stenotrophomonas maltophilia
           Ab55555]
          Length = 551

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 183/396 (46%), Gaps = 25/396 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP F+K+GQ  +TR DL P D+  +L+ L  +         ++ +E A G  +SE
Sbjct: 58  ALQDLGPIFVKFGQILSTRRDLVPPDVANELTLLQDRVKPFDGETARRIVEDALGLPVSE 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
            F  F+  P+AS SIAQVH A+L     G++     V VKV  PG+ + I  D  ++N L
Sbjct: 118 AFASFDTEPLASASIAQVHAATL---ADGRQ-----VVVKVLRPGIEKQIDADIALLNSL 169

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AA +    P    +R  E V +    + +++DL RE A+ S     +    D+  P+ ++
Sbjct: 170 AALVERTHPRADKIRPREVVAEVENTLAAELDLQREGANASVLRRFWENSDDLYVPEVIW 229

Query: 402 PLVHPAVLVETYEQGECV-SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
              H A    T E+   + S  +  L      + ALA  G       +  DNF HAD H 
Sbjct: 230 S--HTAERALTLERVWGIPSDDIAALDKAGIDRKALAAKGVRVFYTQVFRDNFFHADAHA 287

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI V     +        + P  I LD G+  +LS+ D+  L E F A+  RD R  AE
Sbjct: 288 GNIWVDTDPARC-------ANPRFIALDFGIMGQLSQEDQYYLAENFMAIFNRDYRRIAE 340

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
             ++   +       + +A +  V E +    T     +  AE + +L    +R+++ + 
Sbjct: 341 LHVQARWMPDHVRIDDLEAAVRSVCEPYF---TRPLSQISLAEVLMKLFRVAQRYQLTLQ 397

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
             +  +  T L +EG  R+LDP  ++    + +L K
Sbjct: 398 PQLILLQKTLLNIEGVGRQLDPQIDIWAVAKPVLAK 433


>gi|242241156|ref|YP_002989337.1| ubiquinone biosynthesis protein UbiB [Dickeya dadantii Ech703]
 gi|242133213|gb|ACS87515.1| 2-polyprenylphenol 6-hydroxylase [Dickeya dadantii Ech703]
          Length = 545

 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 174/397 (43%), Gaps = 32/397 (8%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP +IK+GQ  +TR DLF   +  +L+ L  +         ++ IE A G RL  
Sbjct: 60  ALQELGPVWIKFGQMMSTRRDLFSPAIADQLALLQDQVQPFDGKLARQQIESAMGDRLEN 119

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-L 341
            FD FE  P+AS SIAQVH A  R +  G+      + +KV  P +   I+ D  ++N +
Sbjct: 120 WFDDFEIVPLASASIAQVHTA--RLKSTGKD-----IVIKVIRPDILPVIKADMRLMNRI 172

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +  ++P  + LR  E V+++   ++ +++L REAA+  +   NF     +  P+ VY
Sbjct: 173 AGWLPILLPDGRRLRPREVVREYEKTLLDELNLMREAANAIQLRRNFENSPMLYIPE-VY 231

Query: 402 P-LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
           P      VLV     G  VS  VD L+ H      LA  G       +  D+F HADMHP
Sbjct: 232 PDYCSERVLVMERIYGIPVSD-VDALKRHGINMPLLAERGVQVFFTQVFRDSFFHADMHP 290

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI +     +          P  I +D G+   L+K D+  L E F A   RD R  AE
Sbjct: 291 GNIFISYEHPED---------PQYIGIDCGIVGSLNKDDKRYLAENFIAFFNRDYRRVAE 341

Query: 521 CTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP------AECMQQLLEKVRRHRV 574
             +         N + F       FA     E     P         +  L    RR  +
Sbjct: 342 LHVDSGWVPADTNVEEF------EFAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNM 395

Query: 575 NVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            V   +  +  T L +EG  R+L P  ++  T +  L
Sbjct: 396 EVQPQLVLLQKTLLYIEGLGRQLYPQLDLWKTAKPFL 432


>gi|188532394|ref|YP_001906191.1| ubiquinone biosynthesis protein UbiB [Erwinia tasmaniensis Et1/99]
 gi|226695729|sp|B2VG47.1|UBIB_ERWT9 RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|188027436|emb|CAO95283.1| Probable ubiquinone biosynthesis protein UbiB [Erwinia tasmaniensis
           Et1/99]
          Length = 545

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 176/401 (43%), Gaps = 26/401 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP +IK+GQ  +TR DLFP  +  +L+ L  K      A  KK IE + G  +  
Sbjct: 60  ALEQLGPVWIKFGQMMSTRRDLFPPHIADQLAMLQDKVAPFDGAQAKKLIEHSLGAPVES 119

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
            FD F+  P+AS SIAQVH A+L+    G++     V +KV  P +   I+ D  +I  L
Sbjct: 120 QFDDFDIVPLASASIAQVHTATLKEN--GRE-----VVIKVIRPDILPVIKADMKLIYRL 172

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +  ++P  + LR  E V  +   ++ +++L REAA+  +   NF   + +  P+   
Sbjct: 173 ARWVPRLLPDGRRLRPQEVVADYEKTLLDELNLLREAANAIQLRRNFADGQMLYVPEIYS 232

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 +LV     G  +S  V  L+ H      LA  G       +  D+F HADMHPG
Sbjct: 233 DYCSENMLVMERIYGIPISD-VATLEQHGVNMKLLAERGVQVFFTQVFRDSFFHADMHPG 291

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V     +          P  I +D G+   L+K D+  L E F A   RD R  AE 
Sbjct: 292 NIFVSYEHPED---------PQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAEL 342

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +    N  + +  I  V E        E    H    +  L    RR  + V  
Sbjct: 343 HVDSGWVPADTNVEDFEFAIRTVCEPIFEKPLAEISFGH---VLLNLFNTARRFNMEVQP 399

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
            +  +  T L +EG  R+L P  ++  T +  L   +W K 
Sbjct: 400 QLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFL--ENWIKD 438


>gi|432329949|ref|YP_007248092.1| putative unusual protein kinase [Methanoregula formicicum SMSP]
 gi|432136658|gb|AGB01585.1| putative unusual protein kinase [Methanoregula formicicum SMSP]
          Length = 553

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 179/403 (44%), Gaps = 29/403 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K+GQ  +TR +L P ++ ++L  L   A    F+     IE        + 
Sbjct: 56  LEELGPTFVKFGQIMSTRTELLPPEMIEQLKRLQDHAKPVPFSEVMAIIEENC-PEWEDY 114

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NLA 342
           F   EE PVAS SI QVHRA LR    G KV     A+K++ PG+ E I  D  I+ ++A
Sbjct: 115 FGDIEETPVASASIGQVHRAYLR---DGTKV-----ALKIQRPGIPEIIELDIGILQSMA 166

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
            +I +V+P  +       V  FA  ++ ++D  R+A + +R   NF+ +  V FPK  + 
Sbjct: 167 ERIETVLPETRVYNPKGMVDDFAHQIVKELDFTRDARNANRMSRNFQNFPGVRFPKIYWE 226

Query: 403 LVHPAVLVETYEQGECV-SRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
              P  LV  + +G  +  R      G +    A+   G HA LKM+  D + H D HPG
Sbjct: 227 YSKPHFLVMEFVEGVRIDDREAIREMGQD--PHAIGVRGFHAYLKMIFEDGYFHGDPHPG 284

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           N+LV               +  ++FLD G+   L    R N +    A+   +       
Sbjct: 285 NLLV-------------TKEGDIVFLDFGIVGILRPEKRQNFINLLFALTTDNIELMIRS 331

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAE---CMQQLLEKVRRHRVNVDG 578
                      + +A  +++      +   EGD V        + +L E +RR+R+ V  
Sbjct: 332 LEGFGIVIAEEDREALRDDLYIMMHDFSGGEGDGVSQLNFGLVVTELTEAMRRYRLKVPM 391

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLS 621
           N+  ++   +++     +LDP +N    +   L K   A + S
Sbjct: 392 NLMLLLKVFVMVLDIGVRLDPKFNFGKEVTPYLSKLADANTFS 434


>gi|302879318|ref|YP_003847882.1| ABC-1 domain-containing protein [Gallionella capsiferriformans
           ES-2]
 gi|302582107|gb|ADL56118.1| ABC-1 domain-containing protein [Gallionella capsiferriformans
           ES-2]
          Length = 572

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 179/397 (45%), Gaps = 38/397 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V + LE  GP F+K GQ  ATR DLF  +   +  +L   AP   +A   + ++   G  
Sbjct: 64  VRQALEELGPTFVKLGQVLATRVDLFEPEWITEFGKLQDNAPPVPYAEISQQLQEDLGAA 123

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV-I 338
              +F  F+ AP+A+ SIAQVHRA L     G +     V VKVR PG+   I  D   +
Sbjct: 124 PESLFAAFDPAPLAAASIAQVHRARLE---DGSE-----VIVKVRRPGIRPVIEADLRWM 175

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLA---REAAHLSRFIYNFRRWKDVS 395
           + LA    S  P ++  R  E V+QF++ +  ++D A   R A H++    N+    DV 
Sbjct: 176 MRLAELAESESPELRSFRPKEVVRQFSLSLRRELDFAIECRNAEHIALNFANYSGQSDVI 235

Query: 396 FPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERL---------KSALAHIGTHALLK 446
              P+  +V P V  +   +  CV  Y+D + G  RL         +  LA  G  A+LK
Sbjct: 236 PDAPI--IVIPRVYWQWTGERVCVQEYIDGIPGR-RLDAVDQAGLDRKTLARRGARAVLK 292

Query: 447 MLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEF 506
           M++ D F HAD HPGN+              +     + F+D GM   L++  R  L+  
Sbjct: 293 MIVEDGFFHADPHPGNV-------------FYLPDNRIAFIDFGMVGRLTEERREQLIRL 339

Query: 507 FKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLL 566
              + + + +   +  L  +      +      E++     +       +     +  ++
Sbjct: 340 LLGLVQHEPKRVLDVLLDWTG-DGAQDETGLTLEIETFLDQYHGVALKQLRIGAMLSDMV 398

Query: 567 EKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
             +R+H++ +  ++  ++   + LEG  R+LDP +++
Sbjct: 399 AILRQHQLMLPSDMAILVKAFISLEGMGRELDPDFDI 435


>gi|255659494|ref|ZP_05404903.1| putative ubiquinone biosynthesis protein AarF [Mitsuokella
           multacida DSM 20544]
 gi|260848046|gb|EEX68053.1| putative ubiquinone biosynthesis protein AarF [Mitsuokella
           multacida DSM 20544]
          Length = 533

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 181/403 (44%), Gaps = 27/403 (6%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + LE  GP F+K GQ  + RPD  P + C +L +L S A    F    + IE+ + RR +
Sbjct: 42  QVLEDLGPTFVKLGQIMSMRPDFLPPEYCDELMKLQSGAKPLPFPVILEVIEKEYNRRWN 101

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           ++F   +E  + S SIAQVHRA L     G+K     V VKV+ PG+ E + +D V++  
Sbjct: 102 QVFKSIDEEALGSASIAQVHRAVL---ASGEK-----VVVKVQRPGIYEIMSKDIVLLKR 153

Query: 342 AAKISSVIPAVK-WLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           AA +  ++   +  L     + +       ++D   EA H+  F +  R    V  PK  
Sbjct: 154 AATLLKIVSHTQDVLDFGMILDEMWTIAKQEMDFLMEADHIEEFEHLNRDVDYVGCPKVY 213

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALA-HIGTHALLKMLLVDNFIHADMH 459
             L    +LV  Y  G  +  + D+L+ +    + L  H+G +  +K ++ D + HAD H
Sbjct: 214 RQLSTQHLLVMEYIDGIRIDDF-DKLRANGYDINTLGRHLGEN-YVKQIIEDGYFHADPH 271

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGNI V+  +              +I+LD+GM   LS  DRV + +   A+A  D     
Sbjct: 272 PGNIWVKNGR--------------IIWLDLGMMGRLSGRDRVAIRKAVLALANHDTFEMK 317

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
              L L       N  A  +++D   A + + +   +      +Q++  +R H +     
Sbjct: 318 AAVLSLGVVHGRINHTALYQDIDSMMAQYSSLDFKSLQMGVLTRQIMNILRVHHIACPQG 377

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKSLSY 622
           +       L +EG  R   P  + ++      L  D+ K+ S+
Sbjct: 378 LSMFARGVLTIEGVMRLCCPKVSFVEIFAK-SLSLDFKKNFSW 419


>gi|322834847|ref|YP_004214874.1| 2-polyprenylphenol 6-hydroxylase [Rahnella sp. Y9602]
 gi|384260067|ref|YP_005404001.1| putative ubiquinone biosynthesis protein UbiB [Rahnella aquatilis
           HX2]
 gi|321170048|gb|ADW75747.1| 2-polyprenylphenol 6-hydroxylase [Rahnella sp. Y9602]
 gi|380756043|gb|AFE60434.1| putative ubiquinone biosynthesis protein UbiB [Rahnella aquatilis
           HX2]
          Length = 543

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 181/393 (46%), Gaps = 26/393 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP +IK+GQ  +TR DLFP  +  +L+ L    P    A  ++ I+ A G  L   
Sbjct: 61  LEQLGPVWIKFGQMMSTRRDLFPPHIADQLALLQDHVPPFDGAKARQQIDAALGGPLETW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-LA 342
           FD F++ P+AS SIAQVH A L+     +  KP+V  +KV  P +  +I  D  +++ LA
Sbjct: 121 FDEFDQTPLASASIAQVHTAILK-----ENGKPVV--LKVIRPDILPTIVADIRLMSRLA 173

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  ++P  + LR  E V+++   ++ +++L REAA+  +   NF     +  P+ VYP
Sbjct: 174 GWLPILLPDGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEGSPMLYVPE-VYP 232

Query: 403 -LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 ++V     G  VS  ++ L+        LA  G       +  D+F HADMHPG
Sbjct: 233 DYCSEQLMVMERIYGIPVSD-IEALKKQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPG 291

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V     +          P  I +D G+   L+K D+  L E F A   RD R  AE 
Sbjct: 292 NIFVSYETPED---------PCYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAEL 342

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    + +  N    +  I  V E    +  P  D+      +  L    RR  + V  
Sbjct: 343 HVDSGWVPRDTNVEEFEFAIRTVCE--PIFEKPLADISF-GNVLLNLFNTARRFNMEVQP 399

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++  T +  L
Sbjct: 400 QLVLLQKTLLYVEGLGRQLYPQLDLWTTAKPFL 432


>gi|425449301|ref|ZP_18829142.1| Similar to tr|Q8Z0A9|Q8Z0A9 [Microcystis aeruginosa PCC 7941]
 gi|389764095|emb|CCI09520.1| Similar to tr|Q8Z0A9|Q8Z0A9 [Microcystis aeruginosa PCC 7941]
          Length = 549

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 191/407 (46%), Gaps = 38/407 (9%)

Query: 218 HVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG 277
            V+ + L   GP ++K GQ  +TRPDL P +  + L+ L ++ P  ++   +  I     
Sbjct: 44  EVLKKILVELGPFYVKLGQLLSTRPDLLPANYIEALTALQAQVPPVAWTDIEIVITEQLA 103

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
           + + ++F      P+A+GSI Q+HRA+L     G++     VA+KV  PG+ + + +D  
Sbjct: 104 KPIEQVFKYINTQPIAAGSIGQIHRATL---LSGEE-----VAIKVLRPGIEKIVAQDSA 155

Query: 338 IINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF--RRW---K 392
           +I   A + ++    +   + +  ++F   + +++D  +E  +  +  YN    RW   K
Sbjct: 156 LIKGIADLVALTEFGQSYDVVDLAEEFIKAVNAELDFTQEGHYTDQLRYNLTQSRWSEPK 215

Query: 393 DVSFPKPVYPLVHPAVLVETYEQGEC-----VSRYVDELQGHERLKSALAHIGTHALLKM 447
            +  PK  + L +  +LV  + +G+      VSR   E Q   + KS +  I   +  + 
Sbjct: 216 QLVIPKIYWHLTNSKLLVLEWLEGKQILEADVSRPPTE-QAISQRKSEITRILFRSFFQQ 274

Query: 448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF 507
           + +D F HAD HPGNI              +     V  +D GM   L    +  L E  
Sbjct: 275 IYIDGFFHADPHPGNI-------------FYLDDGRVALIDCGMVGRLDPQTQQILTELL 321

Query: 508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIE-EVD--EAFAFWGTPEGDLVHPAECMQQ 564
            A+   D +  ++ T++LS+      P   ++ EVD       +     + ++ +E + +
Sbjct: 322 LAIVDLDAKRCSQLTIKLSE---SVVPITLVQLEVDYERMLRKYYNLNLNQINFSEVVYE 378

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           LL+  RR+R+ + GN+     +   LEG  RK +P  N+++ ++ LL
Sbjct: 379 LLQIARRNRIKLPGNLGLFAKSLANLEGTARKFNPDINILEEVKPLL 425


>gi|425437073|ref|ZP_18817501.1| Similar to tr|Q8Z0A9|Q8Z0A9 [Microcystis aeruginosa PCC 9432]
 gi|389677998|emb|CCH93086.1| Similar to tr|Q8Z0A9|Q8Z0A9 [Microcystis aeruginosa PCC 9432]
          Length = 549

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 191/407 (46%), Gaps = 38/407 (9%)

Query: 218 HVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG 277
            V+ + L   GP ++K GQ  +TRPDL P +  + L+ L ++ P  ++   +  I     
Sbjct: 44  EVLKKILVELGPFYVKLGQLLSTRPDLLPANYIEALTALQAQVPPVAWTDIEIVITEQLA 103

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
           + + ++F      P+A+GSI Q+HRA+L     G++     VA+KV  PG+ + + +D  
Sbjct: 104 KPIEQVFKYINTQPIAAGSIGQIHRATL---LSGEE-----VAIKVLRPGIEKIVAQDSA 155

Query: 338 IINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF--RRW---K 392
           +I   A + ++    +   + +  ++F   + +++D  +E  +  +  YN    RW   K
Sbjct: 156 LIKGIADLVALTEFGQSYDVVDLAEEFIKAVNAELDFTQEGHYTDQLRYNLTQSRWSEPK 215

Query: 393 DVSFPKPVYPLVHPAVLVETYEQGEC-----VSRYVDELQGHERLKSALAHIGTHALLKM 447
            +  PK  + L +  +LV  + +G+      VSR   E Q   + KS +  I   +  + 
Sbjct: 216 QLVIPKIYWHLTNSKLLVLEWLEGKQILEADVSRPPTE-QAISQRKSEITRILFRSFFQQ 274

Query: 448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF 507
           + +D F HAD HPGNI              +     V  +D GM   L    +  L E  
Sbjct: 275 IYIDGFFHADPHPGNI-------------FYLDDGRVALIDCGMVGRLDPQTQQILTELL 321

Query: 508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIE-EVD--EAFAFWGTPEGDLVHPAECMQQ 564
            A+   D +  ++ T++LS+      P   ++ EVD       +     + ++ +E + +
Sbjct: 322 LAIVDLDAKRCSQLTIKLSE---SVVPITLVQLEVDYERMLRKYYNLNLNQINFSEVVYE 378

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           LL+  RR+R+ + GN+     +   LEG  RK +P  N+++ ++ LL
Sbjct: 379 LLQIARRNRIKLPGNLGLFAKSLANLEGTARKFNPDINILEEVKPLL 425


>gi|253574213|ref|ZP_04851555.1| ABC-1 domain-containing protein [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251846690|gb|EES74696.1| ABC-1 domain-containing protein [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 556

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 178/387 (45%), Gaps = 29/387 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  GP F+K GQ A+TR DL P  + ++L +L  + P       +  +E    + L+ 
Sbjct: 60  VLEELGPTFVKVGQLASTRSDLLPEAIIQELVKLQDQVPPFPAEEARAILEAELEQPLAG 119

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           +F  F+E P+A+ SI QVHRA L    P        VA+K++ PG+   I  D  I+ +L
Sbjct: 120 LFQSFDETPLAAASIGQVHRARLITGEP--------VAIKIQRPGIAPVIEMDLDILQHL 171

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
               +     V   ++ + V++FA  + +++D   E  ++ R    F+  + +  P   +
Sbjct: 172 TTLANKRWSWVSRYQIPQMVEEFARSIRAELDYGFEGRNMERIRRQFKADEGIYIPAVHW 231

Query: 402 PLVHPAVLVETYEQGECVSRY--VDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMH 459
           PL    VL   + +G+ ++R   +D L G++R    LA    +ALL+ +    F HAD H
Sbjct: 232 PLTTSRVLTMEFVEGQHLNRLLGIDAL-GYDR--KDLAERLVNALLRQIFEGGFFHADPH 288

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGN+LV              SK  + F+D GM   LS+  + +L     A+ RR      
Sbjct: 289 PGNLLV-------------TSKGELAFIDFGMVGRLSEEMKDHLSSLVIALMRRSTEGMV 335

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAFA-FWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
              LR+    +  +      ++D     ++  P  + +   + +Q L    ++H V +  
Sbjct: 336 RAILRMGLVGDDADTAGLRMDLDRLRERYYDIPFAE-IQIGQALQDLFATAQKHHVVLPA 394

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMD 605
           ++  +    L +EG    LDP   ++D
Sbjct: 395 DLLLLGKALLTVEGVALALDPDLRILD 421


>gi|348028065|ref|YP_004870751.1| 2-polyprenylphenol 6-hydroxylase [Glaciecola nitratireducens
           FR1064]
 gi|347945408|gb|AEP28758.1| 2-polyprenylphenol 6-hydroxylase [Glaciecola nitratireducens
           FR1064]
          Length = 542

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 175/401 (43%), Gaps = 27/401 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG-RRLSE 282
           LET GP +IK+GQ  +TR DL   D+  +LS L    P       ++ I+R+ G + LS 
Sbjct: 58  LETLGPVYIKFGQMLSTRRDLLTNDIATELSMLQDNVPPFDPEKAQEMIKRSLGIQDLSV 117

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
           +F  F   P+AS SIAQVH A+L       K     V +KV  P + ++I  D  +I +L
Sbjct: 118 LFSDFTTKPLASASIAQVHSATL-------KSDNKQVVIKVLRPNIRQTIEADVELITSL 170

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  +   +P  K LR  E V+++   ++ ++DL REAA+  +   NF     +  P    
Sbjct: 171 ARVLQKWLPDGKRLRPVEVVEEYKRTILDELDLLREAANGIQIKRNFEDSDSLYVPHFYS 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 V+V     G  VS  V  L+        LA  G       +  D+F HADMHPG
Sbjct: 231 DHCRKDVIVMERIFGIPVSDVV-ALRAQNTNMKLLAERGVEVFFTQVFRDSFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V          R     P  I +D G+   L+K D+  L E F A   RD R  AE 
Sbjct: 290 NIFV---------SREHPENPRYIGIDYGIVGTLNKEDKRYLAENFIAFFNRDYRKVAEL 340

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
                 +    N  + +  I  V E    +  P  D+      + QL    RR  + V  
Sbjct: 341 HADSGWVPADTNIADFEMAIRTVCE--PIFQKPLEDISF-GNVLLQLFNTARRFNMVVQP 397

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
            +  +  T L +EG  R L P  ++  T +  L   +W K 
Sbjct: 398 QLVLLQKTLLYVEGLGRLLYPQLDLWQTAKPFL--ENWMKE 436


>gi|336476307|ref|YP_004615448.1| ABC-1 domain-containing protein [Methanosalsum zhilinae DSM 4017]
 gi|335929688|gb|AEH60229.1| ABC-1 domain protein [Methanosalsum zhilinae DSM 4017]
          Length = 559

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 174/386 (45%), Gaps = 29/386 (7%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           + LE  GP FIK+GQ  +TR DL P    ++L +L    P  SF   +  I    G  + 
Sbjct: 65  KVLEELGPTFIKFGQILSTRRDLIPPRYIQELEKLQDSVPPFSFDIVQNIIRDELGADID 124

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-N 340
            +F  FE+ P+A+ SI QVH A L   + G       V VKV+ P + + I  D  I+ +
Sbjct: 125 HLFSNFEKNPIAAASIGQVHSAKL---HDGSD-----VVVKVQRPDIKKRIESDLDILYS 176

Query: 341 LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPV 400
           +A  I   I   +  R  E V Q A  + +++D  +EA ++S F  NF+    +  P+  
Sbjct: 177 IAGFIEEYIEESRMYRPKEIVDQLARTISAELDYTQEARNISIFSNNFKHDPHIYIPEVY 236

Query: 401 YPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                  VL     +G   + Y  +++  +   + +A  G  A +K +  D F HADMHP
Sbjct: 237 EEYSTRRVLTIERIKGIKGNDYA-KIEKMDIDVNKIATYGAEAFMKQIFEDGFFHADMHP 295

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAE 520
           GNI +   +K             +  +D GM   +S+  R  L++    +  R+     E
Sbjct: 296 GNIFIINDEK-------------IALIDFGMVGYISEDMRYALIDALFLITNREISQFIE 342

Query: 521 CTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVD 577
                  +S   + P  KA +E +   + ++G     +  P + + Q+   +R+HR  + 
Sbjct: 343 VMRDFGIISGDVDSPALKADLEFL--MYKYYGRSLKQVNMP-DMIHQVFAILRKHRARIP 399

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNV 603
            N+  ++   + + G   +L P +NV
Sbjct: 400 PNISLLLKGVVTISGLGTRLVPDFNV 425


>gi|425466857|ref|ZP_18846151.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
 gi|389830534|emb|CCI27451.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
          Length = 549

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 190/407 (46%), Gaps = 38/407 (9%)

Query: 218 HVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG 277
            V+ + L   GP ++K GQ  +TRPDL P +  + L+ L ++ P  ++   +  I     
Sbjct: 44  EVLKKILVELGPFYVKLGQLLSTRPDLLPANYIEALTALQAQVPPVAWTDIEIVITEQLA 103

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
           + + ++F      P+A+GSI Q+HRA+L     G++     VA+KV  PG+ + + +D  
Sbjct: 104 KPIEQVFKYINPQPIAAGSIGQIHRATL---LSGEE-----VAIKVLRPGIEKIVAQDSA 155

Query: 338 IINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF--RRW---K 392
           +I   A + ++    +   +    ++F   + +++D  +E  +  +  YN    RW   K
Sbjct: 156 LIKGIADLVALTEFGQSYDVVNLAEEFIKAVNAELDFTQEGHYTDQLRYNLTQSRWSEPK 215

Query: 393 DVSFPKPVYPLVHPAVLVETYEQGEC-----VSRYVDELQGHERLKSALAHIGTHALLKM 447
            +  PK  + L +  +LV  + +G+      VSR   E Q   + KS +  I   +  + 
Sbjct: 216 QLVIPKIYWHLTNSKLLVLEWLEGKQILEADVSRPATE-QAISQRKSEITRILFRSFFQQ 274

Query: 448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF 507
           + +D F HAD HPGNI              +     V  +D GM   L    +  L E  
Sbjct: 275 IYIDGFFHADPHPGNI-------------FYLDDGRVALIDCGMVGRLDPQTQQILTELL 321

Query: 508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIE-EVD--EAFAFWGTPEGDLVHPAECMQQ 564
            A+   D +  ++ T++LS+      P   ++ EVD       +     + ++ +E + +
Sbjct: 322 LAIVDLDAKRCSQLTIKLSE---SVVPITLVQLEVDYERMLRKYYNLNLNQINFSEVVYE 378

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           LL+  RR+R+ + GN+     +   LEG  RK +P  N+++ ++ LL
Sbjct: 379 LLQIARRNRIKLPGNLGLFAKSLANLEGTARKFNPDINILEEVKPLL 425


>gi|383192042|ref|YP_005202170.1| 2-polyprenylphenol 6-hydroxylase [Rahnella aquatilis CIP 78.65 =
           ATCC 33071]
 gi|371590300|gb|AEX54030.1| 2-polyprenylphenol 6-hydroxylase [Rahnella aquatilis CIP 78.65 =
           ATCC 33071]
          Length = 543

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 181/393 (46%), Gaps = 26/393 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP +IK+GQ  +TR DLFP  +  +L+ L    P    A  ++ I+ A G  L   
Sbjct: 61  LEQLGPVWIKFGQMMSTRRDLFPPHIADQLALLQDHVPPFDGAKARQQIDAALGGPLETW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-LA 342
           FD F++ P+AS SIAQVH A L+     +  KP+V  +KV  P +  +I  D  +++ LA
Sbjct: 121 FDEFDQTPLASASIAQVHTAILK-----ENGKPVV--LKVIRPDILPTIIADIRLMSRLA 173

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  ++P  + LR  E V+++   ++ +++L REAA+  +   NF     +  P+ VYP
Sbjct: 174 GWLPILLPDGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEGSPMLYVPE-VYP 232

Query: 403 -LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 ++V     G  VS  ++ L+        LA  G       +  D+F HADMHPG
Sbjct: 233 DYCSEQLMVMERIYGIPVSD-IEALKKQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPG 291

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V     +          P  I +D G+   L+K D+  L E F A   RD R  AE 
Sbjct: 292 NIFVSYETPED---------PCYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAEL 342

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    + +  N    +  I  V E    +  P  D+      +  L    RR  + V  
Sbjct: 343 HVDSGWVPRDTNVEEFEFAIRTVCE--PIFEKPLADISF-GNVLLNLFNTARRFNMEVQP 399

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++  T +  L
Sbjct: 400 QLVLLQKTLLYVEGLGRQLYPQLDLWTTAKPFL 432


>gi|398912989|ref|ZP_10656234.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM49]
 gi|398181512|gb|EJM69073.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM49]
          Length = 534

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 176/392 (44%), Gaps = 25/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP FIK+GQ  +TR DL P D+  +L  L  + P      + K IE   G+++S++
Sbjct: 63  LQDLGPIFIKFGQILSTRRDLLPEDIADELMLLQDRVPPFDSQVSVKLIEEQLGKKISDV 122

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + A
Sbjct: 123 FSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPVIAQDLAWLFILA 174

Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           + +  + A  + L   + V  +   +  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 175 RAAEKVSADARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFDGSPLLYVPQVYWD 234

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
              P VLV     G  V+           +K  LA  G       +  D+F HADMHPGN
Sbjct: 235 WCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPGN 293

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V      S         P  I +D G+   L+  D+  L     A  +RD R  A+  
Sbjct: 294 IFVSTVNPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLH 344

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V   
Sbjct: 345 IDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQPQ 401

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 402 LVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|425462733|ref|ZP_18842200.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
 gi|389824133|emb|CCI27116.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
          Length = 549

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 191/407 (46%), Gaps = 38/407 (9%)

Query: 218 HVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG 277
            V+ + L   GP ++K GQ  +TRPDL P +  + L+ L ++ P  ++   +  I     
Sbjct: 44  EVLKKILVELGPFYVKLGQLLSTRPDLLPANYIEALTALQAQVPPVAWTDIEIVITEQLA 103

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
           + + ++F      P+A+GSI Q+HRA+L     G++     VA+KV  PG+ + + +D  
Sbjct: 104 KPIEQVFKYINPQPIAAGSIGQIHRATL---LSGEE-----VAIKVLRPGIEKIVAQDSA 155

Query: 338 IINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF--RRW---K 392
           +I   A + ++    +   + +  ++F   + +++D  +E  +  +  YN    RW   K
Sbjct: 156 LIKGIADLVALTEFGQSYDVVDLAEEFIKAVNAELDFTQEGHYTDQLRYNLTQSRWSEPK 215

Query: 393 DVSFPKPVYPLVHPAVLVETYEQGEC-----VSRYVDELQGHERLKSALAHIGTHALLKM 447
            +  PK  + L +  +LV  + +G+      VSR   E Q   + KS +  I   +  + 
Sbjct: 216 QLVIPKIYWHLTNSKLLVLEWLEGKQILEADVSRPPTE-QAISQRKSEITRILFRSFFQQ 274

Query: 448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF 507
           + +D F HAD HPGNI              +     V  +D GM   L    +  L E  
Sbjct: 275 IYIDGFFHADPHPGNI-------------FYLDDGRVALIDCGMVGRLDPQTQQILTELL 321

Query: 508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIE-EVD--EAFAFWGTPEGDLVHPAECMQQ 564
            A+   D +  ++ T++LS+      P   ++ EVD       +     + ++ +E + +
Sbjct: 322 LAIVDLDAKRCSQLTIKLSE---SVVPITLVQLEVDYERMLRKYYNLNLNQINFSEVVYE 378

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           LL+  RR+R+ + GN+     +   LEG  RK +P  N+++ ++ LL
Sbjct: 379 LLQVARRNRIKLPGNLGLFAKSLANLEGTARKFNPDINILEEVKPLL 425


>gi|320162116|ref|YP_004175341.1| hypothetical protein ANT_27150 [Anaerolinea thermophila UNI-1]
 gi|319995970|dbj|BAJ64741.1| hypothetical protein ANT_27150 [Anaerolinea thermophila UNI-1]
          Length = 564

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 176/390 (45%), Gaps = 23/390 (5%)

Query: 214 ELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIE 273
           E+ LH+ L  LE  G  FIK GQ  +TRPDL P +  ++LS L    P   +   +  IE
Sbjct: 66  EVALHLRL-ALEELGVTFIKLGQILSTRPDLLPPEFIRELSRLQDSVPPLPWEVIRPVIE 124

Query: 274 RAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIR 333
           +  GR L ++F   +  P+AS S+AQVH A L   Y G++     V +KV+ PGV   ++
Sbjct: 125 QELGRPLEDVFAWIDPQPLASASLAQVHFARL---YDGKE-----VVLKVQRPGVPRQVK 176

Query: 334 RDFVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKD 393
            D  I+   A+  +     ++      V +FA  + +++D  REA +  RF  NF     
Sbjct: 177 VDLDILTAWARRVAGTRLGQYYDFVGVVDEFAFTLRNELDYRREARNAERFRRNFAGEPY 236

Query: 394 VSFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNF 453
           +  P+  +      +LV  Y  G  + ++ D L+        +A      ++K +L D F
Sbjct: 237 LHIPEVYWQYTTQRLLVMEYLNGIKIDQF-DRLRAEGYDLKRIALNSARIVIKEVLEDGF 295

Query: 454 IHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARR 513
            HAD HPGN ++   +   +             +D GM   L + DR +LV  +    R 
Sbjct: 296 FHADPHPGNFVILPGEVIGA-------------MDFGMVGFLRECDRADLVRLYIVSVRL 342

Query: 514 DGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
           D     +  +R+       N K    +++     +       +   E ++++   + RH 
Sbjct: 343 DAEGIVDQLIRMGAADVHVNRKQLALDINRLLMKYANLPLKEIRAREVIEEVTPIMFRHH 402

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
           + +  N+  +  T  ++EG   +LDP ++V
Sbjct: 403 LRLPSNLWLLGKTLAMMEGIGLQLDPDFDV 432


>gi|82702725|ref|YP_412291.1| hypothetical protein Nmul_A1598 [Nitrosospira multiformis ATCC
           25196]
 gi|82410790|gb|ABB74899.1| 2-octaprenylphenol hydroxylase [Nitrosospira multiformis ATCC
           25196]
          Length = 591

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 176/422 (41%), Gaps = 53/422 (12%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R +E  GP F+K GQ  ATR DLF  +   + S+L    P   +    + +    G  
Sbjct: 64  VRRAMEEMGPTFVKLGQILATRVDLFDPEWIAEFSKLQDSTPASPYPEVHQQLTEDLGAP 123

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
             EIF  FE  P A+GSIAQVH A L             V VKVR PG+   +  D   +
Sbjct: 124 PEEIFAAFEPEPFAAGSIAQVHLARLE--------DGTEVVVKVRRPGIRVVVEADLRWL 175

Query: 340 N-LAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
           + LA  I +    ++     E V QF   +  ++D   E  H  R   NF  + D +   
Sbjct: 176 SRLAELIETGNSELRHFHWQEVVAQFTQSLRRELDFGAECRHAERVASNFAGYSDEA--S 233

Query: 399 PVYPLVHPA------------VLVETYEQ--GE--CVSRYVDELQGHERL--------KS 434
           P+ PL  PA            V+ + Y Q  GE  CV  Y+  + G +          + 
Sbjct: 234 PILPLAQPAGEGESSSLLPLIVIPKVYWQWTGERVCVQEYIQGISGRDVAAVDRAGLDRK 293

Query: 435 ALAHIGTHALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAE 494
            LA  G  A++KM+LVD   HAD HPGN+              +     + F+D GM   
Sbjct: 294 VLARRGVGAVIKMILVDGLFHADPHPGNL-------------FYLPGNRIAFIDFGMIGL 340

Query: 495 LSKTDRVNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFA--FWGTPE 552
           L +  R  L+     + + D    A   L  + + +  N +A   E+ + F   + G P 
Sbjct: 341 LGEARRGELIHLLLGLVQYDSAAVAGVLLDWTGEGDV-NEEALKTEI-QLFVDQYLGVPL 398

Query: 553 GDLVHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLL 612
             L      +  L+  +R HR+++  ++       + LEG  R+LDP  ++      LL 
Sbjct: 399 KQL-KLGSMLADLVAILRGHRLHLPPDLALFFKAFITLEGTGRELDPELDIAGEALPLLR 457

Query: 613 KA 614
            A
Sbjct: 458 DA 459


>gi|188996848|ref|YP_001931099.1| serine/threonine protein kinase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931915|gb|ACD66545.1| serine/threonine protein kinase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 526

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 196/426 (46%), Gaps = 54/426 (12%)

Query: 207 SFGPQ-FRELWLHVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSF 265
           S GPQ  RE        TLE  GP+FIK GQ  + RPD+ P+ +  +L +L        F
Sbjct: 42  SLGPQRIRE--------TLEKLGPSFIKLGQVLSIRPDIVPQSVILELIKLQDNVKPVDF 93

Query: 266 AYTKKTIERAFGRRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRH 325
              K  IE+   +++ E+F   +  P+ S SIAQV++  L+    G+     +VA+KV+ 
Sbjct: 94  EIIKNIIEKELNQKIEEVFTYVDPNPIGSASIAQVYKGILK---TGE-----IVAIKVKR 145

Query: 326 PGVGESIRRD----FVIINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHL 381
           P + E I  D    + +I+   + S     VK L L   + Q+    + + D   EA+++
Sbjct: 146 PNLEELISLDAEVFYKVISFLERHSK---TVKDLNLKSVIYQYKFTTLREADFEIEASNI 202

Query: 382 SRFIYNFRRWKDVSFPKPVYPLVHPA-VLVETYEQGECVSRYVDELQGHERLKSALAHIG 440
             F  NF  + +  +    YP      +LV  + +G    + ++++Q     K  +A + 
Sbjct: 203 QTFRKNFENFNEKFYIPKYYPQYSTKNILVLEFIEG----KKINQIQLTTSEKQDIARLI 258

Query: 441 THALLKMLLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDR 500
           T A  KM+  D F HAD HPGN+L+             +    ++ LD GM   LS+  +
Sbjct: 259 TDAYYKMVFYDGFYHADPHPGNLLI-------------KEDKTLVLLDFGMVGTLSEEKK 305

Query: 501 VNLVEFFKAVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVD---EAFA--FWGTPEGDL 555
             L E   AV  ++   A    +   +     +PK+ IE+++   E F   ++     + 
Sbjct: 306 RLLYEHIFAVVNKNKTLA----MNFYEGMGMISPKSDIEKLESLVEVFIDRYYNKTLQN- 360

Query: 556 VHPAECMQQLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKA- 614
           ++  + + +++E VR   + +   +  +   ++ L+G  R LDP +N  + L   L K+ 
Sbjct: 361 INLKDMVLEIIELVRECNLYLPTTLAYLGKASIGLDGLIRYLDPNFNPTERLTKFLTKST 420

Query: 615 -DWAKS 619
            D+ K 
Sbjct: 421 KDYIKE 426


>gi|440754741|ref|ZP_20933943.1| ABC1 family protein [Microcystis aeruginosa TAIHU98]
 gi|440174947|gb|ELP54316.1| ABC1 family protein [Microcystis aeruginosa TAIHU98]
          Length = 549

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 191/407 (46%), Gaps = 38/407 (9%)

Query: 218 HVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG 277
            V+ + L   GP ++K GQ  +TRPDL P +  + L+ L ++ P  ++   +  I     
Sbjct: 44  EVLKKILVELGPFYVKLGQLLSTRPDLLPANYIEALTALQAQVPPVAWTDIEIVITEQLA 103

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
           + + ++F      P+A+GSI Q+HRA+L     G++     VA+KV  PG+ + + +D  
Sbjct: 104 KPIKQVFKYINTQPIAAGSIGQIHRATL---LSGEE-----VAIKVLRPGIEKIVAQDSA 155

Query: 338 IINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF--RRW---K 392
           +I   A + ++    +   + +  ++F   + +++D  +E  +  +  YN    RW   K
Sbjct: 156 LIKGIADLVALTEFGQSYDVVDLAEEFIKAVNAELDFTQEGHYTDQLRYNLTQSRWSEPK 215

Query: 393 DVSFPKPVYPLVHPAVLVETYEQGEC-----VSRYVDELQGHERLKSALAHIGTHALLKM 447
            +  PK  + L +  +LV  + +G+      VSR   E Q   + KS +  I   +  + 
Sbjct: 216 QLVIPKIYWHLTNSKLLVLEWLEGKQILEADVSRPPTE-QAISQRKSEITRILFRSFFQQ 274

Query: 448 LLVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFF 507
           + +D F HAD HPGNI              +     V  +D GM   L    +  L E  
Sbjct: 275 IYIDGFFHADPHPGNI-------------FYLDDGRVALIDCGMVGRLDPQTQQILTELL 321

Query: 508 KAVARRDGRTAAECTLRLSKQQNCPNPKAFIE-EVD--EAFAFWGTPEGDLVHPAECMQQ 564
            A+   D +  ++ T++LS+      P   ++ EVD       +     + ++ +E + +
Sbjct: 322 LAIVDLDAKRCSQLTIKLSE---SVVPITLVQLEVDYERMLRKYYNLNLNQINFSEVVYE 378

Query: 565 LLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           LL+  RR+R+ + GN+     +   LEG  RK +P  N+++ ++ LL
Sbjct: 379 LLQIARRNRIKLPGNLGLFAKSLANLEGTARKFNPDINILEEVKPLL 425


>gi|55821087|ref|YP_139529.1| hypothetical protein stu1062 [Streptococcus thermophilus LMG 18311]
 gi|55823013|ref|YP_141454.1| transporter [Streptococcus thermophilus CNRZ1066]
 gi|55737072|gb|AAV60714.1| Conserved hypothetical protein [Streptococcus thermophilus LMG
           18311]
 gi|55738998|gb|AAV62639.1| transporter, putative [Streptococcus thermophilus CNRZ1066]
          Length = 525

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 178/389 (45%), Gaps = 36/389 (9%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           +  E  GP+F+K GQ  +TR DL P    ++LS+L S  P  +       I +     LS
Sbjct: 39  QAFEQLGPSFVKIGQILSTRSDLLPEAYIRELSKLQSSVPPLNKEEVMTAIRQELPTDLS 98

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           E+F  F + P+ASGS+AQ HRA L     GQ+     V +K++ PG+ + ++ D   I L
Sbjct: 99  EVFVDFSKEPLASGSVAQTHRARL---LSGQE-----VIIKIQRPGIDDIVKED---IQL 147

Query: 342 AAKISSVIPA--VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             K++  IP   +  + + E ++     ++ ++D   EA  + RF  N +R   +  P+ 
Sbjct: 148 LIKLARHIPKHFISMVDVQEVLENLCETLIKELDFKNEAEAMKRFRANNKRVVCLGVPEV 207

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQ-GHERLKSALAHIGTHALL---KMLLVDNFIH 455
                 P ++VE Y  G  ++ Y   L+ G++     L  +G   +L   K +  D + H
Sbjct: 208 YDEFTTPHLIVEEYINGIPLNHYSQLLEAGYD-----LEDVGKKLMLSFIKQVFKDGYFH 262

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
            D HPGN+LVR  +              + F+D G+  EL    R +L +   +   +D 
Sbjct: 263 GDPHPGNLLVRDGK--------------IYFIDFGIMGELEVGMRSSLNDILYSFTAQDV 308

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
               +  L +++  N  N     ++V++    +   +   +   + ++ LL   +++ + 
Sbjct: 309 DGMTKAILSITQFDNGLNSAVLSQDVEQMLGRYSGVDIGSLSMTDLLEDLLTVFQKNHLK 368

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
               +  +   +L +EG  R+  P  ++M
Sbjct: 369 ASSQITILEKASLEIEGIFREFAPNIDLM 397


>gi|260887371|ref|ZP_05898634.1| protein kinase, ABC1 family [Selenomonas sputigena ATCC 35185]
 gi|260862909|gb|EEX77409.1| protein kinase, ABC1 family [Selenomonas sputigena ATCC 35185]
          Length = 546

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 175/388 (45%), Gaps = 30/388 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP F+K GQ  + RPD  P++ C +L +L ++A    F+  +K IE+ + RR + I
Sbjct: 57  LEDLGPTFVKLGQIMSMRPDFLPQEYCDELMKLQTEANPLPFSVIEKVIEQEYQRRWTRI 116

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F   +E  + S SIAQVH A L     G+K     V +KV+ PGV + + +D V++  AA
Sbjct: 117 FRSIDEEALGSASIAQVHCAVL---LDGEK-----VVIKVQRPGVHDIMSKDIVLLKRAA 168

Query: 344 KISSVI-PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
            I  ++ PA   +     + +       ++D   EA H+  F +  +    VS PK    
Sbjct: 169 GILKILGPAQDVVDFSMVLDELWAIAKQEMDFVMEANHIEEFRHANQDADFVSCPKVYRH 228

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGT---HALLKMLLVDNFIHADMH 459
           L    VLV  Y  G      +D++ G +        IG       +K ++ D + HAD H
Sbjct: 229 LTTQHVLVMEYVDG----IQIDDVAGLKAAGIDARRIGERLGENYVKQIVEDGYFHADPH 284

Query: 460 PGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           PGNI VR  +              +++LD+GM   LS  DR  + +   A+A+ D     
Sbjct: 285 PGNIWVRGGK--------------IVWLDLGMMGRLSNKDRAAIRKAIFALAQHDVFEMK 330

Query: 520 ECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
              L L   Q   +     +++D   A +G  +   +      +Q++  +R H + +   
Sbjct: 331 AAVLSLGVPQERIDHARLYQDIDALIAQYGDLDFRSLKMGILSRQIMNVLRSHHIAIAPG 390

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTL 607
           +       + +EG  R + P  + ++ L
Sbjct: 391 ISMFCRGVMTIEGVMRLVCPEVSFVEIL 418


>gi|75909587|ref|YP_323883.1| hypothetical protein Ava_3381 [Anabaena variabilis ATCC 29413]
 gi|75703312|gb|ABA22988.1| ABC-1 [Anabaena variabilis ATCC 29413]
          Length = 578

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 168/393 (42%), Gaps = 29/393 (7%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           +  TL   GP FIK GQ  +TR D+FP +  ++L++L  K P   +   +K +E+  G++
Sbjct: 83  IRNTLLDLGPTFIKVGQLFSTRADIFPGEYVEELAKLQDKVPAFGYEQVEKIVEQELGKK 142

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           + E+F  FE  P+A+ S+ QVH+A L   + G+      V VKV+ PG+ +    D  I+
Sbjct: 143 IPELFHSFEPIPLAAASLGQVHKAVL---HSGES-----VVVKVQRPGLKKLFEIDLRIL 194

Query: 340 NLAAKISSVIPAVKWLRLDESV---QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF 396
              A+     P  KW R  + +   ++    +  ++D   E  +   F  NFR ++ V  
Sbjct: 195 KGIARYFQSHP--KWGRGRDWMGIYEECCRILWEEIDYLNEGRNADTFRRNFRGYEWVKV 252

Query: 397 PKPVYPLVHPAVLVETYEQGECVSRY-VDELQGHERLKSALAHIGTHALLKMLLVDNFIH 455
           PK  +    P VL   Y  G  +S+Y   E  G +R    LA  G  A L  LL + F H
Sbjct: 253 PKVYWRYASPRVLTLEYLPGIKISQYEAIEAAGLDR--KVLARQGAQAYLLQLLNNGFFH 310

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
           AD HPGNI V              +   +IF D GM  ++    R  L++    +A++DG
Sbjct: 311 ADPHPGNIAV-------------SADGALIFYDFGMMGQIKSNIREGLMQTLFGIAQKDG 357

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
               +  + L       +       V      +     +    A     L E        
Sbjct: 358 DRVVQSLIDLGAIAPVDDMGPVRRSVQYMLDNFMDKPFENQSVAAISDDLYEIAYNQPFR 417

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
                  VM     LEG  + LDP +N M+  Q
Sbjct: 418 FPATFTFVMRAFSTLEGVGKGLDPEFNFMEVAQ 450


>gi|422016972|ref|ZP_16363547.1| putative ubiquinone biosynthesis protein UbiB [Providencia
           burhodogranariea DSM 19968]
 gi|414091254|gb|EKT52942.1| putative ubiquinone biosynthesis protein UbiB [Providencia
           burhodogranariea DSM 19968]
          Length = 544

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 174/403 (43%), Gaps = 31/403 (7%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP +IK+GQ  +TR DLFP  +  +LS L  K         ++ IE + G  L +
Sbjct: 60  ALQELGPVWIKFGQMLSTRRDLFPPAIADQLSMLQDKVASFDGKLARRYIEESLGGPLEQ 119

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
            FD F+E  +AS SIAQVH A L+     +  K IV  +KV  P +   I+ D  ++   
Sbjct: 120 WFDDFDENALASASIAQVHTAKLK-----ENGKQIV--LKVIRPDILPVIKADVKLMYRL 172

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           A    ++P  + LR  E V+++   ++ +++L RE+A+  +   NF     +  P+    
Sbjct: 173 ANWVPLLPDGRRLRPKEVVREYEKTLIDELNLLRESANAIQLRRNFENSSMLYVPEVYAD 232

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
                V+V     G  VS  +  L+        LA  G       +  D+F HADMHPGN
Sbjct: 233 YCRENVMVMERIYGIPVSD-ITALKAQGTNMKILAERGVKVFFTQVFRDSFFHADMHPGN 291

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V     +          P  I +D G+   L+K D+  L E F A   RD R  AE  
Sbjct: 292 IFVSYEHPED---------PRYIAIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE-- 340

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP------AECMQQLLEKVRRHRVNV 576
             L        P   +E+ +  FA     E     P         +  L    RR  + V
Sbjct: 341 --LHVDSGWVPPDTNVEDFE--FAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEV 396

Query: 577 DGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
              +  +  T L +EG  R+L P  ++  T +  L   DW +S
Sbjct: 397 QPQLVLLQKTLLYIEGLGRQLYPQLDLWKTAKPFL--EDWVQS 437


>gi|340398876|ref|YP_004727901.1| 2-octaprenylphenol hydroxylase [Streptococcus salivarius CCHSS3]
 gi|338742869|emb|CCB93377.1| 2-octaprenylphenol hydroxylase [Streptococcus salivarius CCHSS3]
          Length = 525

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 176/389 (45%), Gaps = 36/389 (9%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           +  E  GP+F+K GQ  +TR DL P    ++LS+L S  P  +       I R     LS
Sbjct: 39  QAFEQLGPSFVKIGQILSTRSDLLPEAYIRELSKLQSSVPPLNKEEVMTAIRRELPSELS 98

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
             F  F E P+ASGS+AQ HRA L     GQ+     V VK++ PG+ E ++ D   I L
Sbjct: 99  ASFLDFSEEPLASGSVAQTHRARL---LSGQE-----VIVKIQRPGIDEVVKED---IQL 147

Query: 342 AAKISSVIPA--VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKP 399
             K++  IP   +  + + E ++     ++ ++D   EA  + RF  N R    +  P+ 
Sbjct: 148 LIKLARHIPKHFIPMVDVQEVLENLRETLIKELDFRNEAEAMKRFKANNRAVACLGVPEV 207

Query: 400 VYPLVHPAVLVETYEQGECVSRYVDELQ-GHERLKSALAHIGTHALL---KMLLVDNFIH 455
                 P ++VE Y  G  ++ Y   L+ G++     L  +G   +L   K +  D + H
Sbjct: 208 YDSFTTPHLIVEEYIDGIPLNDYSQLLEAGYD-----LEDVGKKLMLSFIKQVFKDGYFH 262

Query: 456 ADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDG 515
            D HPGN+LVR  +              + F+D G+  EL    R +L +   +   +D 
Sbjct: 263 GDPHPGNLLVRDGK--------------ICFIDFGIMGELEVGMRASLNDILYSFTAQDV 308

Query: 516 RTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
               +  L +++  N  N     ++V++    +   +   +   + ++ LL   +++ + 
Sbjct: 309 DGMTKAILSVTQFDNGLNRAVLSQDVEQMLGRYSGVDLGSLSMTDLLEDLLAIFQKNHLK 368

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVM 604
               +  +   +L +EG  R+L P  ++M
Sbjct: 369 ASSQITILEKASLQIEGIFRELAPNMDLM 397


>gi|218438911|ref|YP_002377240.1| ABC transporter [Cyanothece sp. PCC 7424]
 gi|218171639|gb|ACK70372.1| ABC-1 domain protein [Cyanothece sp. PCC 7424]
          Length = 549

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 179/403 (44%), Gaps = 30/403 (7%)

Query: 218 HVVLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFG 277
            V+ + L   GP ++K GQ  +TRPDL P+   + LS+L +  P   +      +E+   
Sbjct: 44  EVLRKILVELGPVYVKLGQLLSTRPDLLPKSYIEALSDLQANVPPVQWIEIVSLLEQELP 103

Query: 278 RRLSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFV 337
           +   EIF   ++  VA+GSIAQVH A+L+    G+K     VAVK++ PG+   + +D  
Sbjct: 104 QPPKEIFRAIDQESVAAGSIAQVHWATLK---NGEK-----VAVKIQRPGIDVIVDQDIS 155

Query: 338 IINLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF--RRWKD-- 393
           +I   A++ ++    K   +    ++F   +  +++   EA +  +   N    RW D  
Sbjct: 156 VIKNIAELVALTDFGKDFDIVALAEEFTNAIRVELNFTTEAYYTEQLRQNLSKSRWFDPD 215

Query: 394 -VSFPKPVYPLVHPAVLVETYEQGECVSR----YVDELQGHERLKSALAHIGTHALLKML 448
            V  PK  + L  P +LV  +  G  + +      +    +++ +  +  +   A  + +
Sbjct: 216 RVVIPKVYWDLTTPKILVLEWLDGVPLLKSKLAKTESSHKYQKQRREITTLLFRAFFQQI 275

Query: 449 LVDNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFK 508
            +D F HAD HPGNI              +     V  LD GM   L    +  L E   
Sbjct: 276 YIDGFFHADPHPGNI-------------FYLRDGRVALLDCGMVGRLDPRTQQILTEMLL 322

Query: 509 AVARRDGRTAAECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEK 568
           A+   D +   + TL LS+    P+   F  + D+    +       ++ +E   + L+ 
Sbjct: 323 AIVDIDAQRCTQLTLELSESGQPPSLARFQNDYDQMLRKYYNLSIAQINFSEVFYETLQI 382

Query: 569 VRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            R +R+ +  N+     T   LEG  R  DP  N++D ++ L+
Sbjct: 383 ARNNRIRLPRNMGLYSKTLANLEGVSRSFDPEVNLLDEIKPLM 425


>gi|84490070|ref|YP_448302.1| protein kinase [Methanosphaera stadtmanae DSM 3091]
 gi|84373389|gb|ABC57659.1| predicted protein kinase [Methanosphaera stadtmanae DSM 3091]
          Length = 550

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 184/394 (46%), Gaps = 31/394 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  G  FIK GQ  +T PD+   +L ++LS+L   AP  S+   +  IE  F + +  I
Sbjct: 61  LQELGTTFIKLGQTLSTYPDMVGFELAEELSKLQESAPITSYDEIRTIIEDEFSKPIDSI 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIIN-LA 342
           FD FE  P+AS SI QVH+A+L  +         VVAVKV+HP + ++I +D  I+  +A
Sbjct: 121 FDNFEIKPIASASIGQVHKATLNNK---------VVAVKVQHPNIQDTISKDIQIMRFIA 171

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
            ++ + +   K   L   +  F   +  ++D   EA + +  I +     +V  PK    
Sbjct: 172 NRLDNNVTMAKAYNLPGIIDVFESDIYKELDYKFEAVN-AIHINDLLCEDEVHIPKIYLD 230

Query: 403 LVHPAVLVETYEQGECVSR-YVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                VLV  +  G  +++  +D    ++  K  +A IGT + +K +LV  F HAD HPG
Sbjct: 231 YSTNKVLVMEFLDGVSLNKVLMDSTDKYD--KEKIAQIGTDSFVKQILVHGFYHADPHPG 288

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V               +  V F+D GM   LS   R +L + F  ++  D +   + 
Sbjct: 289 NIFV-------------LEENIVAFVDFGMMGHLSADLRADLAKLFIFISEGDSKLLTKQ 335

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPA--ECMQQLLEKVRRHRVNVDGN 579
              +   +N  N +    E+      +   + + V     E M + L  + ++ + +  +
Sbjct: 336 LYYMGIIKNKNNFENIENEITHLLDKYYNSQFNDVSGVFKELMHEDL--LNKYGLVIPRD 393

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
           +  V+ T ++++   + L P +NV + L+   LK
Sbjct: 394 LMMVIRTIIMIDDIGKSLVPSFNVTEALKPYALK 427


>gi|254522076|ref|ZP_05134131.1| 2-polyprenylphenol 6-hydroxylase [Stenotrophomonas sp. SKA14]
 gi|219719667|gb|EED38192.1| 2-polyprenylphenol 6-hydroxylase [Stenotrophomonas sp. SKA14]
          Length = 561

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 183/396 (46%), Gaps = 52/396 (13%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            ++  GP F+K GQ  ATR DL P +   +LSEL +  P   +A  ++ +E   G   +E
Sbjct: 68  AMQDLGPTFVKLGQVLATRVDLLPPEWIAELSELQNAVPALPYADIREQLEADLGASPAE 127

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINL 341
           +F   +E P+A+ S+AQ HRA L   + G++     V +KVR PG+ + +  D  ++  L
Sbjct: 128 VFAFLDETPMAAASLAQAHRARL---HDGRE-----VVLKVRRPGIRDVVEADLRLLARL 179

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A  + + +P ++  R  E VQQF V +  ++D A E  +  R   NF+   D+     + 
Sbjct: 180 AEIVEARLPDLRRYRPAEVVQQFTVSLRRELDFAAECRNAERIARNFKGRDDI-----LI 234

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERL--------KSALAHIGTHALLKMLLVDNF 453
           P VH     E+      V  +VD + G +          +  LA  G   +LKM+L D  
Sbjct: 235 PCVHWQWTCESLN----VQDFVDGIPGRDLAGVDAAGLDRRELARRGADIVLKMVLEDGS 290

Query: 454 IHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARR 513
            HAD HPGNI             ++     +  +D GM   LS+  R  + +    +  +
Sbjct: 291 FHADPHPGNI-------------IYLRDGRIGVIDFGMVGALSEVRRFQVAQLLHGLVEQ 337

Query: 514 DGRTAAECTL------RLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLE 567
           D ++ A+  L       + + +   +   F+++      + G P  DL      +  + +
Sbjct: 338 DPQSVADVLLDWAGGVEVDENRLQHDISQFVDQ------YRGVPLKDL-RIGLMLGDITQ 390

Query: 568 KVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
            +R + + +  ++  ++   L LEG  R+LDP +++
Sbjct: 391 LLRSYSLTLPADLALMIKAFLTLEGMGRQLDPDFDM 426


>gi|293393994|ref|ZP_06638300.1| 2-polyprenylphenol 6-hydroxylase [Serratia odorifera DSM 4582]
 gi|291423554|gb|EFE96777.1| 2-polyprenylphenol 6-hydroxylase [Serratia odorifera DSM 4582]
          Length = 543

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 178/392 (45%), Gaps = 24/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP +IK+GQ  +TR DLFP  +  +L+ L  +      A  ++ IE A G  L + 
Sbjct: 61  LQELGPVWIKFGQMMSTRRDLFPPQIADQLTLLQDRVAPFDGALARQHIELAMGGPLEQW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           FD F++  +AS SIAQVH A  R +  GQ+     V +KV  P +G  I+ D  ++  LA
Sbjct: 121 FDDFDQQALASASIAQVHTA--RLKSNGQE-----VVLKVIRPDIGPIIKADVRLMYRLA 173

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
             +  ++P  + LR  E V+++   ++ +++L REAA+  +   NF     +  P+    
Sbjct: 174 GWVPKLLPDGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEGSPMLYVPEVYSD 233

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
               +VLV     G  VS  +  L+        LA  G       +  D+F HADMHPGN
Sbjct: 234 YCRESVLVMERIYGIPVSD-IPTLEKQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGN 292

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V     +          P  I +D G+   L+K D+  L E F A   RD R  AE  
Sbjct: 293 IFVSYEHPED---------PCYIGIDCGIVGSLNKDDKRYLAENFIAFFNRDYRKVAELH 343

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    + +  N  + +  I  V E    +  P  ++      +  L    RR  + V   
Sbjct: 344 VDSGWVPRDTNVEDFEFAIRTVCE--PIFEKPLAEISF-GNVLLNLFNTARRFNMEVQPQ 400

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L P  ++  T +  L
Sbjct: 401 LVLLQKTLLYVEGLGRQLYPQLDLWTTAKPFL 432


>gi|229587948|ref|YP_002870067.1| putative ubiquinone biosynthesis-like protein [Pseudomonas
           fluorescens SBW25]
 gi|259550890|sp|C3K8U2.1|UBIB_PSEFS RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|229359814|emb|CAY46664.1| putative ubiquinone biosynthesis-related protein [Pseudomonas
           fluorescens SBW25]
          Length = 534

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 175/393 (44%), Gaps = 25/393 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L  L  + P      + K IE   G+++SE
Sbjct: 62  ALQDLGPIFIKFGQILSTRRDLLPEDIADELMLLQDRVPPFDSQQSMKLIEEQLGKKISE 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + 
Sbjct: 122 VFSRFDVDPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPIIGQDLAWLFIL 173

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ +    A  + L   + V  +   +  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 174 ARAAERFSADARLLHPVDVVADYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  V+           +K  LA  G       +  D+F HADMHPG
Sbjct: 234 DWCRPKVLVMERIYGVQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V      S         P  I +D G+   L+  D+  L     A  +RD R  A+ 
Sbjct: 293 NIFVSTVNPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQL 343

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V  
Sbjct: 344 HIDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQP 400

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 401 QLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|325916034|ref|ZP_08178324.1| 2-octaprenylphenol hydroxylase [Xanthomonas vesicatoria ATCC 35937]
 gi|325537710|gb|EGD09416.1| 2-octaprenylphenol hydroxylase [Xanthomonas vesicatoria ATCC 35937]
          Length = 574

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 174/400 (43%), Gaps = 53/400 (13%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP F+K GQ  ATR DL   +  ++LSEL +  P   F   +  +  A G  
Sbjct: 79  VRRALEELGPTFVKLGQVLATRVDLLSSEWIEELSELQNAVPALPFEQIRPQLVAALGAE 138

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VI 338
              IF   +E P+A+ S+AQ HRA L    P        V +K+R PG+G++I  D  ++
Sbjct: 139 PESIFARLDEQPLAAASLAQTHRAWLADGTP--------VVLKIRRPGIGDTIDADLRLL 190

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA  + +  P +K  R  E VQQF V +  ++D A E  +  R   NF        P+
Sbjct: 191 ARLADIVETRAPDLKRYRPAEVVQQFTVSLRRELDFAAECRNAERIAANF-----AHDPQ 245

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERL--------KSALAHIGTHALLKMLLV 450
            V P V+     E+      V  ++D + G +          + ALA  G   +LKM+L 
Sbjct: 246 VVVPAVYWQWTCESLN----VQEFIDGIPGRDLASVDAAGLDRKALARTGAGIVLKMVLQ 301

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV 510
           D   HAD HPGNI              +     +  +D GM   +S+  R  + +    +
Sbjct: 302 DGCFHADPHPGNI-------------FYLRDGRIAVIDFGMVGRVSEQRRFQVAQLLHGM 348

Query: 511 ARRDGRTA-------AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQ 563
              D           A   L + + +   +  AF++E      + G P  +L      + 
Sbjct: 349 VSYDADAVIDVLLEWAGTRLDIDEARLQQDIGAFVDE------YRGVPLKEL-RIGAMLG 401

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
            +   +R H + +  ++  ++   L LEG  R+LDP +++
Sbjct: 402 DVTAILRDHGLALPSDLALMIKAFLTLEGMGRQLDPDFDM 441


>gi|332706344|ref|ZP_08426407.1| putative unusual protein kinase [Moorea producens 3L]
 gi|332354893|gb|EGJ34370.1| putative unusual protein kinase [Moorea producens 3L]
          Length = 618

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 154/343 (44%), Gaps = 36/343 (10%)

Query: 222 RTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLS 281
           +  E  G  ++K GQ  A R D+ P ++C +L  L  +A     A  + TIE   G  + 
Sbjct: 88  QIFEDLGGFWVKTGQLLALRTDILPDEICDQLIRLQYEAIGFPMAIVRSTIESELGAPME 147

Query: 282 EIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINL 341
           +IF  F+E P+A+ SI QVHRA+LR      K K + V VK++ P + E+ +RD  +I +
Sbjct: 148 KIFQDFDETPLAAASIGQVHRATLR-----SKRKNVPVIVKIQRPNLAEAFKRDLDLIKV 202

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
            AK+      + +LRLDE+V +       ++D   EA++        ++ K +  PK   
Sbjct: 203 VAKVLISFNFMSYLRLDEAVSELDKIFNEELDYRYEASNTRNMRKTLKQHK-IYVPKIYN 261

Query: 402 PLVHPAVLVETYEQGECVSRYVDEL--------QGHERLKSALAHIGTH---ALLKMLLV 450
                 VLV  Y  G   S Y+  L        Q  +         G     +LL+ +  
Sbjct: 262 KYSKRRVLVMEYIDGVLASDYIKVLARDPVRASQWQDENDFDPKKAGETMFISLLRQVFE 321

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV 510
           DN  H D+HPGNI             +F  +  V F+D+G    L +  RV   E+  A+
Sbjct: 322 DNLYHGDLHPGNI-------------IFLRRSKVAFIDMGSVGSLDRELRVTYNEYTNAL 368

Query: 511 ARRDGRTAAECTLRLS---KQQNCPNPKAFIEEVDEAFAFWGT 550
           +  D   AA   LRL+    + N P  +A   E+  A   W T
Sbjct: 369 SDGDFAKAANYILRLAVDIPRVNVPRVRA---EMSSAIEVWST 408


>gi|422680217|ref|ZP_16738489.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas syringae pv. tabaci
           str. ATCC 11528]
 gi|331009563|gb|EGH89619.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas syringae pv. tabaci
           str. ATCC 11528]
          Length = 539

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 174/392 (44%), Gaps = 25/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP FIK+GQ  +TR DL P D+  +L  L  + P          IE   G R+ ++
Sbjct: 63  LQDLGPIFIKFGQLLSTRRDLLPEDIADELMLLQDRVPPFDQQVAINLIEEQLGARICDV 122

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+E P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   +++ A
Sbjct: 123 FSRFDETPLASASVAQVHAACLK---TGEE-----VVVKVVRPGLKSVIGQDLAWLSILA 174

Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           +++  + A  + L   + V  +   +  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 175 RMAERVSADARLLHPVQVVMDYEKTIYDELDLLREAANSSQLRRNFEGSDLLYVPQVYWD 234

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
              P VLV     G  V+           +K  LA  G       +  D+F HADMHPGN
Sbjct: 235 WCRPKVLVMERIYGLQVTDMAGLADQRTDMK-LLAERGVEIFFTQIFRDSFFHADMHPGN 293

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V      S         P  I +D G+   L+  D+  L     A  +RD R  A+  
Sbjct: 294 IFVSTVNPWS---------PKYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLH 344

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V   
Sbjct: 345 IDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQPQ 401

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 402 LVLLQKTLLNIEGLGRQLYPDLDLWSTAQPYL 433


>gi|170744296|ref|YP_001772951.1| 2-polyprenylphenol 6-hydroxylase [Methylobacterium sp. 4-46]
 gi|168198570|gb|ACA20517.1| 2-polyprenylphenol 6-hydroxylase [Methylobacterium sp. 4-46]
          Length = 517

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 173/387 (44%), Gaps = 30/387 (7%)

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGF 287
           GP+++K+GQ+ ATRPD+      + L  L  + P         TIE   G+R+  +F   
Sbjct: 65  GPSYVKFGQFLATRPDIVGVAAARDLERLQDRVPPFPQEVAVATIEETLGQRVGALFLSL 124

Query: 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISS 347
              P+A+ SIAQVHRA  R R PG   + I  AVKV  PGV E   RD   +   A++  
Sbjct: 125 -SPPIAAASIAQVHRA--RIREPGGAERTI--AVKVMRPGVRERFARDIQAMRFMARVVE 179

Query: 348 VI-PAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYPLVHP 406
           ++ P  + LR  E V+  A  +  ++DL  EAA LS F  N +  +D   P+P++ L   
Sbjct: 180 ILRPEAERLRPREVVETLARSVAMEMDLRLEAAALSEFAENIKGDEDFRVPRPIWELTGR 239

Query: 407 AVLVETYEQG-ECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGNILV 465
            VL   +  G     R      GH+   +AL      + L+  + D F HADMHPGN+ V
Sbjct: 240 DVLASEWIDGIRLNDRAAIVAAGHD--TAALGRTVIQSFLRHAIRDGFFHADMHPGNLFV 297

Query: 466 RVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECTLRL 525
               + ++             +D G+   L   +R  L E       RD R  AE     
Sbjct: 298 DPMGRLAA-------------VDFGIMGRLGIKERRFLAEILLGFILRDYRRVAEVHF-- 342

Query: 526 SKQQNCPNPKAFIEEVDEAFAFWGTP----EGDLVHPAECMQQLLEKVRRHRVNVDGNVC 581
            +    P+  + +++  +A    G P      D +  A+ +  L +      ++    + 
Sbjct: 343 -EAGYVPSHHS-VDDFAQAIRAIGEPIHQRRADEISMAKVLTLLFDVTALFDMSTRTELV 400

Query: 582 TVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
            +  T +V+EG  R LDP  ++  T +
Sbjct: 401 MLQKTMVVVEGVARSLDPRLDMWTTAE 427


>gi|110636209|ref|YP_676417.1| 2-octaprenylphenol hydroxylase [Chelativorans sp. BNC1]
 gi|110287193|gb|ABG65252.1| 2-octaprenylphenol hydroxylase [Chelativorans sp. BNC1]
          Length = 532

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 170/385 (44%), Gaps = 27/385 (7%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  G +FIK GQ  + RPDLFP    ++L +L   A   S    +  +E A  R L E+
Sbjct: 42  LDELGGSFIKIGQALSMRPDLFPEAYLRQLRDLREHARPFSAQEARAELENAMRRPLDEV 101

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  FE  P A+ SIAQVHRA+L     GQ      V VK+R P + E I  D  I+   A
Sbjct: 102 FRTFESEPFAAASIAQVHRATL---TDGQD-----VIVKIRRPHMRERIDGDMRILVGVA 153

Query: 344 KISSV-IPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           +++ V +P ++  +     ++    +  + DL +EA ++ RF   +++  DV  P     
Sbjct: 154 RLAGVAVPGLRRFQPARLAREIWANLRRETDLLQEARNIRRFREAYKQRADVYVPAAFEA 213

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
           L   A+LV+    G  +      +Q   R+   L       LLK        H D HPGN
Sbjct: 214 LCSEAILVQVMSHGRSIEDPA-VVQDGPRIAGVLVDFYLEQLLKT----GLFHGDPHPGN 268

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           + V                  + F D G+   L +T R NL  F +A  ++D     +  
Sbjct: 269 LFV-------------MEDGRICFHDFGLVGYLDRTTRRNLGIFLQAFVQQDAGWMLDAA 315

Query: 523 LRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVCT 582
           + LS          F++ ++E  + + +        A+   +++       V V  N+  
Sbjct: 316 IALSLIDRQAERTLFVQGIEEILSDYSSLPLKDWSIADAFLRVMRLGDGAHVVVPYNLMV 375

Query: 583 VMVTTLVLEGWQRKLDPGYNVMDTL 607
            +    ++EG  R+LDP +NV+DTL
Sbjct: 376 FVRALFLIEGCLRRLDPDFNVLDTL 400


>gi|83589102|ref|YP_429111.1| 2-octaprenylphenol hydroxylase [Moorella thermoacetica ATCC 39073]
 gi|83572016|gb|ABC18568.1| 2-octaprenylphenol hydroxylase [Moorella thermoacetica ATCC 39073]
          Length = 554

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 171/378 (45%), Gaps = 25/378 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK GQ  +TRPDL P D+  +L+ L  + P   FA  +K +E   G+ L E+
Sbjct: 58  LEELGPTFIKLGQLLSTRPDLLPADIISELTRLQDRVPPFPFADVRKAVEEELGQPLEEL 117

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           F  F+  P+A  SI QVH A+L     G +     V VKV+ PG+   +R D  ++ +LA
Sbjct: 118 FASFDPEPLAVASIGQVHLATL---PDGSQ-----VIVKVQRPGIARQVRVDLEILFDLA 169

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
                  P  K    ++   +FA  +  ++D  RE  +  RF  NF     V FP   + 
Sbjct: 170 RLAQRHTPYGKIYDFNQMAAEFARALTEELDYTREGRNADRFRENFAGDASVYFPAVYWD 229

Query: 403 LVHPAVLVETYEQGECVSRYVD-ELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                VL + Y +   ++   + + +G+ R + A+      A+ + +LVD F H D HPG
Sbjct: 230 YTTRGVLTQEYVEAVKLNNLEEIDRRGYSRRRIAVNL--ARAVYQQVLVDGFFHGDPHPG 287

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           N+ V   +              ++F+D G+T  L++  +   V     + RR  +     
Sbjct: 288 NLAVLPGEV-------------IVFMDFGLTGTLTEELKEQFVNLVLGIIRRRSQDVLRT 334

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVC 581
            + +       +  A   E++     +       +   + +++LL+   R+ + +   + 
Sbjct: 335 IIAMGMVPAEVDRGALRREIEALRDKYYHLSFRQISLGQAIEELLQLAFRYHLRMPPELT 394

Query: 582 TVMVTTLVLEGWQRKLDP 599
            +  T L LEG  RKLDP
Sbjct: 395 LLGKTLLTLEGLVRKLDP 412


>gi|398930144|ref|ZP_10664391.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM48]
 gi|398165815|gb|EJM53926.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM48]
          Length = 534

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 176/392 (44%), Gaps = 25/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP FIK+GQ  +TR DL P D+  +L  L  + P      + K IE   G+++S++
Sbjct: 63  LQDLGPIFIKFGQILSTRRDLLPEDIADELMMLQDRVPPFDSQVSVKLIEEQLGKKISDV 122

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + A
Sbjct: 123 FSRFDVEPLASASVAQVHAAQLK---TGEE-----VVVKVIRPGLKPVIAQDLAWLFILA 174

Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           + +  + A  + L   + V  +   +  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 175 RAAEKLSADARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFDGSPLLYVPQVYWD 234

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
              P VLV     G  V+           +K  LA  G       +  D+F HADMHPGN
Sbjct: 235 WCRPKVLVMERIYGIQVTDLATLADQRTDMK-ILAERGVEIFFTQVFRDSFFHADMHPGN 293

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V      S         P  I +D G+   L+  D+  L     A  +RD R  A+  
Sbjct: 294 IFVSTVNPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLH 344

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V   
Sbjct: 345 IDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQPQ 401

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 402 LVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|304314004|ref|YP_003849151.1| protein kinase [Methanothermobacter marburgensis str. Marburg]
 gi|302587463|gb|ADL57838.1| predicted protein kinase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 558

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 181/394 (45%), Gaps = 42/394 (10%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            LE  G  FIK GQ  +TR DL  R++  +L++L  +AP   F   ++ IE   G  L +
Sbjct: 65  VLEELGTTFIKLGQVLSTRADLVGREIADELAKLQDEAPPFPFRDVRRVIESELGMPLED 124

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           IF  F+E PVAS SI QVHRA L+    G+      VAVKV+ PG+  +++ D +++   
Sbjct: 125 IFSEFQEEPVASASIGQVHRARLK---SGE-----AVAVKVQRPGIAATVKSDIILMKYL 176

Query: 343 AKISSV-IPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           AK+++  IP +++  L   V +F   +  ++D  +EA +  RF   F   + V  P    
Sbjct: 177 AKLANDRIPGLEYYNLPGIVAEFERAIRKELDYHQEANNAERFRAMFLDDETVYAPYVYR 236

Query: 402 PLVHPAVLVETYEQGECVSRYVD-ELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHP 460
                 VL   Y +G  ++  ++ +++ + R    +A  G     K + +  F HAD HP
Sbjct: 237 EYSTSRVLTMEYVEGVKLTEILESDIKFNAR---TIAERGARCYFKQIFIHGFFHADPHP 293

Query: 461 GNILVRVAQKKSSQKRLFRSKPHVI-FLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAA 519
           GNILV+              K +V+ FLD GM   L ++ R  L E F  +   D     
Sbjct: 294 GNILVQ--------------KGNVLCFLDFGMMGHLDRSFRDKLAELFILLMNYD----V 335

Query: 520 ECTLRLSKQQNCPNPKAFIEEV-----DEAFAFWGTPEGDLVHPAECMQQLL--EKVRRH 572
              +   +  N       +EEV     D    ++G    D+    E + +    E + +H
Sbjct: 336 NGIVNQLRYMNILTEDTDLEEVKYDIMDLLDRYYG---ADVKKVGEILTEFTMPEMIMKH 392

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDT 606
           R+ +  +   +     + E    +LDP +N ++ 
Sbjct: 393 RIRIPRDFVLLARVMSMAEDLGERLDPRFNGLEV 426


>gi|209524921|ref|ZP_03273466.1| ABC-1 domain protein [Arthrospira maxima CS-328]
 gi|423067424|ref|ZP_17056214.1| ABC1 family protein [Arthrospira platensis C1]
 gi|209494570|gb|EDZ94880.1| ABC-1 domain protein [Arthrospira maxima CS-328]
 gi|406710998|gb|EKD06200.1| ABC1 family protein [Arthrospira platensis C1]
          Length = 588

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 173/400 (43%), Gaps = 33/400 (8%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V  +L   GP FIK GQ  +TR DLFP +  ++LS+L  + P   +   ++ I++ FG+ 
Sbjct: 92  VRESLLDLGPTFIKLGQLFSTRADLFPGEYVEELSKLQDRVPAFPYEQCREIIDQDFGKS 151

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           + ++F  F+  P+A+ S+ QVH+A L   Y G       V VKV+ PG+ +    D  I+
Sbjct: 152 VEQLFRNFDPVPLAAASLGQVHKAQL---YSGAD-----VVVKVQRPGLKQLFEVDLAIL 203

Query: 340 NLAAKISSVIPAVKWLRLDESV---QQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSF 396
              A+     P  KW R  + +    +    +  ++D   E  +   F  NFR    V  
Sbjct: 204 KGIARYFQNHP--KWGRGRDWLGIYDECCRILWEEIDYLNEGRNADTFRRNFRHCDWVQV 261

Query: 397 PKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHA 456
           P+  +    P VL   Y  G  +S Y + L+     +  LA +G  A L+ LL D F HA
Sbjct: 262 PRVCWQFSSPRVLTLEYLPGIKISNY-EALEASGLDRKQLAQMGAKAYLQQLLNDGFFHA 320

Query: 457 DMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGR 516
           D HPGNI V      S Q +L       IF D GM   ++   R  L+E    +A +D  
Sbjct: 321 DPHPGNIAV------SPQGQL-------IFYDFGMMGRITSNLREKLMETLFGIANKDAD 367

Query: 517 TAAECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHR 573
              +  +    L+   +    +  I+ + + F      E  +   A     L E      
Sbjct: 368 RVVKSLIEVGALAPTGDMSPVRRSIQYMLDNFMDQPFEEQSI---AAISDDLYEIAYDQP 424

Query: 574 VNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLK 613
                    VM     LEG  + LDP +N M+  Q   ++
Sbjct: 425 FRFPATFTFVMRAFSTLEGVGKGLDPEFNFMEVAQPFAIQ 464


>gi|399007246|ref|ZP_10709759.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM17]
 gi|398120688|gb|EJM10342.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas sp. GM17]
          Length = 534

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 176/393 (44%), Gaps = 25/393 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
            L+  GP FIK+GQ  +TR DL P D+  +L  L  + P      +   IE   G+++SE
Sbjct: 62  ALQDLGPIFIKFGQILSTRRDLLPEDIADELMLLQDRVPPFDSKKSVALIEEQLGKKVSE 121

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + 
Sbjct: 122 VFSRFDIEPLASASVAQVHAAQLK---SGEE-----VVVKVIRPGLKPVIAQDLAWLFIL 173

Query: 343 AKISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A+ +  + A  + L   + V  +   +  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 174 ARAAEKVSADARLLHPVDVVSDYEKTIYDELDLLREAANASQLKRNFEGSPLLYVPQVYW 233

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
               P VLV     G  V+           +K  LA  G       +  D+F HADMHPG
Sbjct: 234 DWCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPG 292

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V   Q  S         P  I +D G+   L+  D+  L     A  +RD R  A+ 
Sbjct: 293 NIFVSTVQPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQL 343

Query: 522 TLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDG 578
            +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V  
Sbjct: 344 HIDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQP 400

Query: 579 NVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 401 QLVLLQKTLLNIEGLGRQLYPELDLWNTAQPFL 433


>gi|428214684|ref|YP_007087828.1| putative unusual protein kinase [Oscillatoria acuminata PCC 6304]
 gi|428003065|gb|AFY83908.1| putative unusual protein kinase [Oscillatoria acuminata PCC 6304]
          Length = 550

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 187/397 (47%), Gaps = 38/397 (9%)

Query: 228 GPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEIFDGF 287
           GP ++K GQ  +TRPDL P++   +L+ L ++ P   +   + TI +   + + ++F   
Sbjct: 55  GPVYVKVGQLLSTRPDLLPQEYIDELTALQAEVPPVPWEDVEVTIRQQLRQPIEDVFATL 114

Query: 288 EEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAAKISS 347
              PVA+GSIAQ HRA+L+    GQ+     VAVKV+ PG+ + I +D  ++   A++ S
Sbjct: 115 NTEPVAAGSIAQTHRATLK---NGQE-----VAVKVQRPGLEKIIEQDITLLTGLAELVS 166

Query: 348 VIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNF--RRWKD---VSFPKPVYP 402
           +        L    ++F   +  +++   E A+  +   N    RW D   V+ P+  + 
Sbjct: 167 IAEFGDSYDLVALAEEFGTALRGELNFTEEGANGDKLRRNLAKSRWFDPTKVAIPEIYWN 226

Query: 403 LVHPAVLVETYEQGE--CVSRYVDELQGHERL--KSALAHIGTHALLKMLLVDNFIHADM 458
           L    +LV  + +GE   +++Y D + G +R+  + A+A++ T    + + +D F HAD 
Sbjct: 227 LTTEKLLVMEWVEGEPILLAKY-DGMPGIDRITQRKAIANLLTRVFFQQICLDGFFHADP 285

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGN+              +     V  +D GM   +    +  L+E   A+   D +  
Sbjct: 286 HPGNL-------------FYLRDGRVALIDCGMVGRMDPRTQQLLIEMLLAMVNLDAQRC 332

Query: 519 AECTLRL----SKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRV 574
           ++  + +    SK  N  N ++  + +   +      E   +  ++   ++LE  R +R+
Sbjct: 333 SQLAIDMAGSTSKTVNVSNLESDYDRLLRRYYNMSLSE---LSFSQMFYEVLEVSRNNRL 389

Query: 575 NVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
            +  N+         LEG  R LDP YN  + ++ L+
Sbjct: 390 RMPANMGLCAKAIANLEGIARNLDPDYNFAEQIKPLM 426


>gi|186475146|ref|YP_001856616.1| putative ubiquinone biosynthesis protein UbiB [Burkholderia
           phymatum STM815]
 gi|226695717|sp|B2JCV1.1|UBIB_BURP8 RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|184191605|gb|ACC69570.1| 2-polyprenylphenol 6-hydroxylase [Burkholderia phymatum STM815]
          Length = 527

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 178/394 (45%), Gaps = 25/394 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE+ GP F+K+GQ  +TR DL   D+  +L++L  + P    A     IE++ G  +  I
Sbjct: 56  LESLGPIFVKFGQVLSTRRDLLRPDIATELAKLQDQVPPFDSAVAIAIIEKSLGAPVDTI 115

Query: 284 FDGFEEAPVASGSIAQVHRASLRF-RYPGQKVKPIVVAVKVRHPGVGESIRRDFVII-NL 341
           FD FE  PVAS SIAQVH A+L+  ++ G++     VAVKV  P +   I  D  ++ ++
Sbjct: 116 FDDFERVPVASASIAQVHFATLKIGQHAGKQ-----VAVKVLRPNMLPVIDSDLALLRDI 170

Query: 342 AAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVY 401
           A     +    K L+  E V +F  ++  ++DL REAA+ S+   NF     +  P+  +
Sbjct: 171 AVWAERLWADGKRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMYW 230

Query: 402 PLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
                 VLV     G  +S+ VD L+        LA  G       +  D F HADMHPG
Sbjct: 231 EYCTANVLVMERMVGVPISQ-VDTLRVAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPG 289

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           NI V +      +          I LD G+   LS  D+  L + F A  +RD    A  
Sbjct: 290 NIQVSLDPAHFGR---------YIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVATL 340

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDL----VHPAECMQQLLEKVRRHRVNVD 577
            L    +         +EE++ A      P  D     +   + + +L    RR  V + 
Sbjct: 341 HL----ESGWVPATTRVEELESAIRAVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQ 396

Query: 578 GNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
             +  +  T L +EG  R LDP  ++  T +  L
Sbjct: 397 PQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYL 430


>gi|428216215|ref|YP_007089359.1| putative unusual protein kinase [Oscillatoria acuminata PCC 6304]
 gi|428004596|gb|AFY85439.1| putative unusual protein kinase [Oscillatoria acuminata PCC 6304]
          Length = 595

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 143/312 (45%), Gaps = 31/312 (9%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           +  TL   GP FIK GQ  +TR DLFP +  ++L++L  + P  S+   +  IE  FGR+
Sbjct: 100 IRETLLELGPTFIKLGQLFSTRSDLFPGEYVEELAKLQDRVPAFSYEQAQAIIEEDFGRK 159

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVII 339
           + E+F  F+  P+A+ S+ QVH+A L   + G++     + VKV+ PG+      D  I 
Sbjct: 160 VEELFRSFDPVPIAAASLGQVHKAQL---HSGEE-----IVVKVQRPGLKRLFGIDLAIA 211

Query: 340 NLAAKISSVIP----AVKWLRL-DESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDV 394
              A      P       WL + DE  +     +  +VD   E  +   F  NFR  + V
Sbjct: 212 KTIAHYFQNHPRWGRGRDWLGIYDECYK----ILYEEVDYINEGRNADTFRRNFRDKEWV 267

Query: 395 SFPKPVYPLVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFI 454
             P+  +    P VL   Y  G  +S Y + L+     +  LA +G  A L+ LL   F 
Sbjct: 268 RVPRVYWRYSSPRVLTLEYLPGIKISHY-EALEAAGLDRKILAKLGAEAYLRQLLNHGFF 326

Query: 455 HADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRD 514
           HAD HPGN+ V                  +IF D GM   +    RV L++ F  +A+++
Sbjct: 327 HADPHPGNLAV-------------SPDGALIFYDFGMMGRIRTDVRVKLLDLFFGIAKKN 373

Query: 515 GRTAAECTLRLS 526
                EC + L 
Sbjct: 374 AEDVVECLIELE 385


>gi|289662677|ref|ZP_06484258.1| ubiquinone biosynthesis protein [Xanthomonas campestris pv.
           vasculorum NCPPB 702]
 gi|289669640|ref|ZP_06490715.1| ubiquinone biosynthesis protein [Xanthomonas campestris pv.
           musacearum NCPPB 4381]
          Length = 558

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 173/400 (43%), Gaps = 53/400 (13%)

Query: 220 VLRTLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRR 279
           V R LE  GP F+K GQ  ATR DL P +  ++LSEL +  P   F   +  +  A G  
Sbjct: 63  VRRALEELGPTFVKLGQVLATRVDLLPPEWIEELSELQNAVPALPFEQIRPQLVAALGME 122

Query: 280 LSEIFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VI 338
              +F   +E P+A+ S+AQ HRA L        V    V +K+R P +G++I  D  ++
Sbjct: 123 PESVFARLDEQPLAAASLAQTHRAWL--------VDGTPVVLKIRRPDIGDTIDADLRLL 174

Query: 339 INLAAKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPK 398
             LA  + +  P +K  R  + VQQF V +  ++D A E  +  R   NF     V    
Sbjct: 175 ARLAEIVETRAPDLKRYRPADVVQQFTVSLRRELDFAAEGRNAERIAANFAHDAQV---- 230

Query: 399 PVYPLVHPAVLVETYEQGECVSRYVDELQGHERL--------KSALAHIGTHALLKMLLV 450
                V P V  E   +   V  ++D + G + L        + ALA  G   +LKM+L 
Sbjct: 231 -----VVPTVYWEWTCESLNVQEFIDGIPGRDLLAVDAAGLDRKALARAGAGIVLKMVLQ 285

Query: 451 DNFIHADMHPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAV 510
           D   HAD HPGNI              +     +  +D GM   +S+  R  + +    +
Sbjct: 286 DGCFHADPHPGNI-------------FYLRDGRIAVIDFGMVGRVSEQRRFQVAQLLHGM 332

Query: 511 ARRDGRTAAECTLRLSKQQ-NCPNPK------AFIEEVDEAFAFWGTPEGDLVHPAECMQ 563
              D     +  L  +    +   P+      AF++E      + G P  +L      + 
Sbjct: 333 VSYDAEAVIDVLLEWAGTSLDIDEPRLQQDIGAFVDE------YRGVPLKEL-RIGAMLG 385

Query: 564 QLLEKVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPGYNV 603
            +   +R H + +  ++  ++   L LEG  R+LDP +++
Sbjct: 386 DVTSILRDHGLTLPSDLALMIKAFLTLEGMGRQLDPDFDM 425


>gi|283781137|ref|YP_003371892.1| ABC transporter [Pirellula staleyi DSM 6068]
 gi|283439590|gb|ADB18032.1| ABC-1 domain protein [Pirellula staleyi DSM 6068]
          Length = 562

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 167/387 (43%), Gaps = 24/387 (6%)

Query: 223 TLETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSE 282
           TL   GP FIK GQ  +TR D+   +L  +L +L S AP       ++ +E   G  L E
Sbjct: 64  TLTELGPTFIKLGQLLSTRADVVGTELASELKQLQSAAPADPPDVVRRIVESELGETLEE 123

Query: 283 IFDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLA 342
           +F  F+ +P+AS SI QVHRA L     G+      V VKV+H  +  ++  D  ++   
Sbjct: 124 LFLEFDLSPIASASIGQVHRARL---LTGE-----AVVVKVQHDKIEHTVNEDLEVLAGL 175

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           A+++  I   K  R   +V      +  ++D  RE  +L +F    +    V  PK +  
Sbjct: 176 AQLAETITEFKPYRPVATVADMGRTLRRELDFGREERNLQQFASLLKDDTTVHIPKSITD 235

Query: 403 LVHPAVLVETYEQGECVSRYVD-ELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPG 461
           L    VL     +G  +      E  G +R    +A  G    L+M+ V  F HAD HPG
Sbjct: 236 LSTARVLTMELMEGIAIENTAAIEAAGIDR--EEVARRGAKLYLQMIFVHGFFHADPHPG 293

Query: 462 NILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAEC 521
           N+L+                  +  LD GM A + +  R ++ E   ++   D  +    
Sbjct: 294 NVLLLPGNV-------------IGLLDFGMVARIDERLREDIEEMLLSIVNHDVTSLTRV 340

Query: 522 TLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGNVC 581
             R+       +      +V +    +GT   D    +  +  +   +RR+R+ +   V 
Sbjct: 341 IKRIGAVPPNLDEAGLSNDVADFVGHYGTQALDQFDLSGALTDMTGIIRRYRIMLPTQVA 400

Query: 582 TVMVTTLVLEGWQRKLDPGYNVMDTLQ 608
            ++   + LEG  + L P +++M+ +Q
Sbjct: 401 MLIKVLVTLEGTSKLLSPKFSLMEVMQ 427


>gi|409422000|ref|ZP_11259117.1| putative ubiquinone biosynthesis-like protein [Pseudomonas sp. HYS]
          Length = 535

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 174/392 (44%), Gaps = 25/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP FIK+GQ  +TR DL P D+  +L  L  + P          IE   G ++SE+
Sbjct: 63  LQDLGPIFIKFGQLLSTRRDLLPEDIADELMLLQDRVPPFDPQKAIALIEEQLGAKISEV 122

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + L A
Sbjct: 123 FSRFDVEPLASASVAQVHAAKLK---SGEE-----VVVKVVRPGLKPVIAQDLAWLFLIA 174

Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           + +  + A  + L   E V  +   +  ++DL REAA+ S+   NF   + +  P+  + 
Sbjct: 175 RGAERVSADARLLHPVEVVNDYEKTIYDELDLLREAANASQLKRNFEGSEMMYVPQVYWD 234

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
              P VLV     G  V+           +K  LA  G       +  D+F HADMHPGN
Sbjct: 235 WCRPKVLVMERIYGIQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPGN 293

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V   +  S         P  I +D G+   L+  D+  L     A  +RD R  A+  
Sbjct: 294 IFVSTVKPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLH 344

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +  Q      +A I  V E    +  P  D+    + + +L +  RR  + V   
Sbjct: 345 IDSGWVPAQTKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQPQ 401

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 402 LVLLQKTLLNIEGLGRQLYPDLDLWTTAQPFL 433


>gi|85058089|ref|YP_453791.1| ubiquinone biosynthesis protein UbiB [Sodalis glossinidius str.
           'morsitans']
 gi|123520321|sp|Q2NWT9.1|UBIB_SODGM RecName: Full=Probable ubiquinone biosynthesis protein UbiB
 gi|84778609|dbj|BAE73386.1| ubiquinone biosynthesis protein [Sodalis glossinidius str.
           'morsitans']
          Length = 544

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 183/407 (44%), Gaps = 41/407 (10%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP +IK+GQ  +TR DLFP  +  +L+ L  +      A  +  IER+ G+ L   
Sbjct: 61  LQELGPVWIKFGQMLSTRRDLFPPAIADQLAMLQDRVQPFDGALARAHIERSMGQPLETW 120

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDF-VIINLA 342
           FD F++ P+AS SIAQVH A L+    GQ+     V +KV  P +   I+ D  ++  LA
Sbjct: 121 FDDFQQEPLASASIAQVHTARLK---NGQE-----VVIKVIRPDILPMIKADMRLMYRLA 172

Query: 343 AKISSVIPAVKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           + +  ++P  + LR  E V ++   ++ +++L REAA+  +   NF    D S P    P
Sbjct: 173 SWVPHLLPDGRRLRPVEVVLEYEKTLLDELNLLREAANAIQLRRNF----DGS-PMLYIP 227

Query: 403 LVHPAVLVETYEQGECVSRY-VDELQGHERLKSA---LAHIGTHALLKMLLVDNFIHADM 458
            V+P    ET    E +    V+++   E+  +    LA  G       +  D+F H DM
Sbjct: 228 EVYPDYCSETMMVMERIYGVPVNDVAALEKQGTNMKLLAERGVQVFFTQVFRDSFFHGDM 287

Query: 459 HPGNILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTA 518
           HPGNI V     ++         P  I +D G+   L+K D+  L E F A   RD R  
Sbjct: 288 HPGNIFVSFEHPEN---------PQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKV 338

Query: 519 AECTLRLSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHP------AECMQQLLEKVRRH 572
           AE    L        P   +E+ +  FA     E     P         +  L    RR 
Sbjct: 339 AE----LHVDSGWVPPDTNVEDFE--FAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRF 392

Query: 573 RVNVDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLLLKADWAKS 619
            + V   +  +  T L +EG  R+L P  ++  T +  L   +W K 
Sbjct: 393 NMEVQPQLVLLQKTLLYIEGVGRQLYPQLDLWKTAKPFL--EEWIKD 437


>gi|395799797|ref|ZP_10479077.1| putative ubiquinone biosynthesis-like protein [Pseudomonas sp. Ag1]
 gi|421138673|ref|ZP_15598728.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas fluorescens BBc6R8]
 gi|395336302|gb|EJF68163.1| putative ubiquinone biosynthesis-like protein [Pseudomonas sp. Ag1]
 gi|404510060|gb|EKA23975.1| 2-polyprenylphenol 6-hydroxylase [Pseudomonas fluorescens BBc6R8]
          Length = 534

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 175/392 (44%), Gaps = 25/392 (6%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           L+  GP FIK+GQ  +TR DL P D+  +L  L  + P          IE   G+++SE+
Sbjct: 63  LQDLGPIFIKFGQILSTRRDLLPEDIADELMLLQDRVPPFDSQLAVTLIEEQLGKKISEV 122

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+ AP+AS S+AQVH A L+    G++     V VKV  PG+   I +D   + + A
Sbjct: 123 FSRFDIAPLASASVAQVHAAQLK---SGEE-----VVVKVIRPGLKPIIGQDLAWLFILA 174

Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           + +    A  + L   + V  +   +  ++DL REAA+ S+   NF   + +  P+  + 
Sbjct: 175 RAAERFSADARLLHPVDVVLDYEKTIYDELDLLREAANASQLKRNFEGSQLLYVPQVYWD 234

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
              P VLV     G  V+           +K  LA  G       +  D+F HADMHPGN
Sbjct: 235 WCRPKVLVMERIYGVQVTDLATLADQRTDMK-MLAERGVEIFFTQVFRDSFFHADMHPGN 293

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDRVNLVEFFKAVARRDGRTAAECT 522
           I V      S         P  I +D G+   L+  D+  L     A  +RD R  A+  
Sbjct: 294 IFVSTVNPWS---------PQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLH 344

Query: 523 LR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVNVDGN 579
           +    +  +      +A I  V E    +  P  D+    + + +L +  RR  + V   
Sbjct: 345 IDSGWVPAETKLNEFEAAIRTVCE--PIFEKPLKDISF-GQVLMRLFQTARRFNMEVQPQ 401

Query: 580 VCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           +  +  T L +EG  R+L P  ++ +T Q  L
Sbjct: 402 LVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFL 433


>gi|399519161|ref|ZP_10759969.1| ubiB3 [Pseudomonas pseudoalcaligenes CECT 5344]
 gi|399112985|emb|CCH36527.1| ubiB3 [Pseudomonas pseudoalcaligenes CECT 5344]
          Length = 527

 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 176/396 (44%), Gaps = 33/396 (8%)

Query: 224 LETAGPAFIKWGQWAATRPDLFPRDLCKKLSELHSKAPEHSFAYTKKTIERAFGRRLSEI 283
           LE  GP FIK+GQ  +TR DL P D+  +L+ L  + P          IE   G  +SE+
Sbjct: 63  LEDLGPIFIKFGQLLSTRRDLLPPDIADELARLQDQVPPFPEDQAIALIEAQLGAPVSEL 122

Query: 284 FDGFEEAPVASGSIAQVHRASLRFRYPGQKVKPIVVAVKVRHPGVGESIRRDFVIINLAA 343
           F  F+  P+AS S+AQVH A L+    G++     V VKV  PG+   IR+D   + L A
Sbjct: 123 FARFDSQPLASASVAQVHAAQLK---SGEQ-----VVVKVVRPGLKPVIRQDLAWLFLIA 174

Query: 344 KISSVIPA-VKWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRRWKDVSFPKPVYP 402
           +I+    A  + LR  E V  +   +  ++DL REAA+ S+   NF     +  P+  + 
Sbjct: 175 RIAEKASADARRLRPVEVVSDYEKTIFDELDLLREAANASQLRRNFDGSPLLYVPQVYWD 234

Query: 403 LVHPAVLVETYEQGECVSRYVDELQGHERLKSALAHIGTHALLKMLLVDNFIHADMHPGN 462
           L    VLV     G  V+           +K  LA  G       +  D+F HADMHPGN
Sbjct: 235 LCRHQVLVMERIYGIPVTDLATLADQRTDMK-LLAERGVEIFFTQVFRDSFFHADMHPGN 293

Query: 463 ILVRVAQKKSSQKRLFRSKPHVIFLDVGMTAELSKTDR----VNLVEFFKAVARRDGRTA 518
           I V      S         P  I +D G+   L+  D+     NL+ FFK    RD R  
Sbjct: 294 IFVSTRTPWS---------PQYIAIDCGIIGSLTDEDQDYLARNLIAFFK----RDYRKV 340

Query: 519 AECTLR---LSKQQNCPNPKAFIEEVDEAFAFWGTPEGDLVHPAECMQQLLEKVRRHRVN 575
           A+  +    +         +A I  V E    +  P  D+    + + +L +  RR  + 
Sbjct: 341 AQLHIDSGWVPADTKVNEFEAAIRTVCE--PIFEKPLKDISF-GQLLLRLFQTARRFNME 397

Query: 576 VDGNVCTVMVTTLVLEGWQRKLDPGYNVMDTLQTLL 611
           V   +  +  T L +EG  R+L P  ++  T Q  L
Sbjct: 398 VQPQLVLLQKTLLNIEGLGRQLYPDLDLWSTAQPFL 433


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.324    0.136    0.416 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,495,047,216
Number of Sequences: 23463169
Number of extensions: 376518156
Number of successful extensions: 1119622
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4521
Number of HSP's successfully gapped in prelim test: 1602
Number of HSP's that attempted gapping in prelim test: 1098438
Number of HSP's gapped (non-prelim): 7194
length of query: 630
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 481
effective length of database: 8,863,183,186
effective search space: 4263191112466
effective search space used: 4263191112466
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 80 (35.4 bits)