Query 006811
Match_columns 630
No_of_seqs 262 out of 1664
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 09:36:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006811.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006811hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wg3_C Hedgehog-interacting pr 100.0 3.2E-67 1.1E-71 577.7 35.6 353 137-580 1-375 (463)
2 2g8s_A Glucose/sorbosone dehyd 100.0 3.5E-57 1.2E-61 479.1 38.2 341 135-576 3-352 (353)
3 1cru_A Protein (soluble quinop 100.0 2.6E-54 8.8E-59 473.4 37.1 356 135-573 12-431 (454)
4 3das_A Putative oxidoreductase 100.0 6.4E-54 2.2E-58 456.3 33.1 311 138-576 20-346 (347)
5 3a9g_A Putative uncharacterize 100.0 5.4E-52 1.8E-56 440.2 37.7 323 135-578 14-352 (354)
6 2ism_A Putative oxidoreductase 100.0 1.9E-47 6.5E-52 404.1 33.6 311 138-575 19-352 (352)
7 3e5z_A Putative gluconolactona 98.5 7.6E-05 2.6E-09 74.2 28.3 176 137-418 15-194 (296)
8 1pjx_A Dfpase, DIISOPROPYLFLUO 98.5 0.00011 3.8E-09 72.7 28.5 269 142-576 10-297 (314)
9 3fvz_A Peptidyl-glycine alpha- 98.5 1.2E-05 4.3E-10 82.1 21.7 28 549-576 291-320 (329)
10 2qc5_A Streptogramin B lactona 98.4 0.00014 4.7E-09 71.0 27.3 233 151-576 65-298 (300)
11 3dr2_A Exported gluconolactona 98.4 0.00013 4.5E-09 73.4 27.3 169 139-416 34-209 (305)
12 3g4e_A Regucalcin; six bladed 98.4 0.00042 1.4E-08 69.6 30.3 156 151-418 16-172 (297)
13 2qc5_A Streptogramin B lactona 98.4 0.0004 1.4E-08 67.6 28.5 233 151-576 23-258 (300)
14 2z2n_A Virginiamycin B lyase; 98.3 0.0012 4E-08 64.2 29.0 233 151-576 18-253 (299)
15 3v64_C Agrin; beta propeller, 98.2 7.3E-05 2.5E-09 78.2 20.3 169 137-423 60-231 (349)
16 2z2n_A Virginiamycin B lyase; 98.2 0.0013 4.6E-08 63.9 27.9 234 151-578 60-295 (299)
17 4hw6_A Hypothetical protein, I 98.2 0.00082 2.8E-08 72.6 28.8 278 151-576 142-431 (433)
18 3v65_B Low-density lipoprotein 98.2 4.5E-05 1.5E-09 80.9 18.1 168 138-423 104-274 (386)
19 1rwi_B Serine/threonine-protei 98.2 0.00049 1.7E-08 66.5 24.0 232 151-576 27-262 (270)
20 3hrp_A Uncharacterized protein 98.1 0.00035 1.2E-08 74.6 24.2 180 137-418 159-346 (409)
21 3p5b_L Low density lipoprotein 98.1 0.00017 5.8E-09 77.0 20.3 167 143-423 105-274 (400)
22 3sov_A LRP-6, low-density lipo 98.1 0.00016 5.4E-09 75.0 19.3 164 143-423 28-194 (318)
23 3tc9_A Hypothetical hydrolase; 98.0 0.0021 7.2E-08 69.2 27.8 280 151-576 140-428 (430)
24 3m0c_C LDL receptor, low-densi 98.0 0.00017 5.8E-09 84.2 20.3 167 143-423 417-586 (791)
25 1ijq_A LDL receptor, low-densi 98.0 0.00052 1.8E-08 70.4 20.7 164 144-423 24-192 (316)
26 4a0p_A LRP6, LRP-6, low-densit 97.9 0.00038 1.3E-08 79.0 20.3 149 151-419 40-190 (628)
27 1npe_A Nidogen, entactin; glyc 97.9 0.0011 3.7E-08 65.3 20.8 152 151-419 39-191 (267)
28 3hrp_A Uncharacterized protein 97.9 0.00056 1.9E-08 73.0 19.2 60 151-228 222-285 (409)
29 3s94_A LRP-6, low-density lipo 97.8 0.00055 1.9E-08 77.6 19.1 160 145-421 35-197 (619)
30 3kya_A Putative phosphatase; s 97.8 0.018 6.2E-07 63.8 29.5 202 309-577 250-474 (496)
31 1rwi_B Serine/threonine-protei 97.7 0.00074 2.5E-08 65.3 15.2 149 151-422 111-260 (270)
32 3v65_B Low-density lipoprotein 97.7 0.002 6.7E-08 68.2 19.4 158 145-422 154-314 (386)
33 2dg1_A DRP35, lactonase; beta 97.7 0.0077 2.6E-07 60.2 22.6 166 141-417 36-204 (333)
34 3v64_C Agrin; beta propeller, 97.6 0.0028 9.7E-08 66.1 19.9 159 145-423 111-272 (349)
35 3m0c_C LDL receptor, low-densi 97.6 0.0033 1.1E-07 73.4 21.8 156 148-423 469-629 (791)
36 1npe_A Nidogen, entactin; glyc 97.6 0.0057 2E-07 60.0 20.1 152 147-418 76-230 (267)
37 3s94_A LRP-6, low-density lipo 97.6 0.0028 9.6E-08 71.8 19.7 159 147-424 346-508 (619)
38 3sov_A LRP-6, low-density lipo 97.5 0.0069 2.3E-07 62.6 21.0 158 144-422 73-234 (318)
39 4a0p_A LRP6, LRP-6, low-densit 97.5 0.0051 1.8E-07 69.8 21.6 156 146-423 76-234 (628)
40 3g4e_A Regucalcin; six bladed 97.5 0.0026 9E-08 63.7 16.4 151 151-418 101-265 (297)
41 2qe8_A Uncharacterized protein 97.4 0.081 2.8E-06 54.1 27.4 71 141-229 8-85 (343)
42 3p5b_L Low density lipoprotein 97.4 0.014 4.8E-07 62.1 22.1 156 147-423 156-317 (400)
43 4hw6_A Hypothetical protein, I 97.4 0.0068 2.3E-07 65.4 19.5 30 393-423 401-430 (433)
44 3sre_A PON1, serum paraoxonase 97.4 0.0099 3.4E-07 63.1 20.3 78 307-419 166-245 (355)
45 1ijq_A LDL receptor, low-densi 97.4 0.017 5.7E-07 59.1 21.2 147 151-418 80-230 (316)
46 1q7f_A NHL, brain tumor CG1071 97.4 0.022 7.4E-07 55.7 21.1 156 137-414 107-269 (286)
47 3tc9_A Hypothetical hydrolase; 97.3 0.0087 3E-07 64.4 19.0 30 393-423 398-427 (430)
48 1n7d_A LDL receptor, low-densi 97.3 0.00051 1.7E-08 78.8 9.4 167 142-422 398-567 (699)
49 1q7f_A NHL, brain tumor CG1071 97.2 0.017 5.7E-07 56.5 18.0 142 151-417 80-228 (286)
50 2fp8_A Strictosidine synthase; 97.2 0.014 4.7E-07 59.0 17.8 163 151-423 129-310 (322)
51 2fp8_A Strictosidine synthase; 97.1 0.0092 3.2E-07 60.3 15.4 81 308-418 128-208 (322)
52 3fvz_A Peptidyl-glycine alpha- 97.0 0.052 1.8E-06 55.0 20.1 167 151-424 146-320 (329)
53 1pjx_A Dfpase, DIISOPROPYLFLUO 96.8 0.031 1.1E-06 54.8 16.5 63 308-418 228-291 (314)
54 3vgz_A Uncharacterized protein 96.8 0.093 3.2E-06 52.0 20.1 59 151-228 188-249 (353)
55 3vgz_A Uncharacterized protein 96.8 0.086 3E-06 52.2 19.6 57 151-227 144-202 (353)
56 3hfq_A Uncharacterized protein 96.8 0.071 2.4E-06 53.5 19.1 60 151-227 144-204 (347)
57 2p4o_A Hypothetical protein; p 96.8 0.037 1.3E-06 55.6 16.9 59 309-415 215-278 (306)
58 3dsm_A Uncharacterized protein 96.7 0.14 4.7E-06 52.1 20.2 164 139-414 74-244 (328)
59 3e5z_A Putative gluconolactona 96.7 0.084 2.9E-06 52.0 18.0 56 310-415 222-277 (296)
60 2ghs_A AGR_C_1268P; regucalcin 96.7 0.14 4.6E-06 52.1 20.0 62 309-418 233-295 (326)
61 3a9g_A Putative uncharacterize 96.6 0.063 2.2E-06 56.2 17.9 66 151-230 138-217 (354)
62 3dsm_A Uncharacterized protein 96.5 0.13 4.3E-06 52.3 19.0 60 307-413 226-285 (328)
63 3kya_A Putative phosphatase; s 96.5 0.076 2.6E-06 58.8 18.3 31 392-423 442-472 (496)
64 2ghs_A AGR_C_1268P; regucalcin 96.5 0.16 5.3E-06 51.6 19.3 64 309-416 137-200 (326)
65 3dr2_A Exported gluconolactona 96.4 0.061 2.1E-06 53.7 15.2 54 310-414 243-296 (305)
66 3das_A Putative oxidoreductase 96.4 0.041 1.4E-06 58.1 14.4 64 151-229 143-220 (347)
67 2dg1_A DRP35, lactonase; beta 96.4 0.15 5.3E-06 50.6 18.1 24 151-176 138-168 (333)
68 1ri6_A Putative isomerase YBHE 96.4 0.37 1.3E-05 47.1 20.5 63 151-227 132-195 (343)
69 1n7d_A LDL receptor, low-densi 96.3 0.012 4.1E-07 67.5 10.6 63 307-418 541-606 (699)
70 3scy_A Hypothetical bacterial 96.3 0.51 1.7E-05 47.5 21.6 66 151-227 158-228 (361)
71 3hfq_A Uncharacterized protein 96.2 0.35 1.2E-05 48.3 19.8 30 151-181 89-119 (347)
72 2p4o_A Hypothetical protein; p 96.2 0.044 1.5E-06 55.1 13.1 121 156-354 175-300 (306)
73 3u4y_A Uncharacterized protein 96.1 0.41 1.4E-05 47.1 19.3 74 139-228 118-194 (331)
74 1tl2_A L10, protein (tachylect 96.0 0.017 5.8E-07 58.0 8.7 71 141-227 31-104 (236)
75 1jof_A Carboxy-CIS,CIS-muconat 96.0 0.48 1.7E-05 48.3 19.7 61 151-227 148-210 (365)
76 2p9w_A MAL S 1 allergenic prot 96.0 0.19 6.5E-06 53.0 16.7 68 308-424 139-213 (334)
77 2qe8_A Uncharacterized protein 95.9 0.066 2.2E-06 54.8 12.6 136 151-354 198-337 (343)
78 3u4y_A Uncharacterized protein 95.2 1.3 4.3E-05 43.6 18.8 67 142-229 76-147 (331)
79 2ism_A Putative oxidoreductase 95.2 0.21 7.2E-06 51.9 13.6 27 141-169 193-222 (352)
80 1ri6_A Putative isomerase YBHE 95.0 2.6 8.9E-05 41.0 20.4 59 151-227 87-146 (343)
81 1nir_A Nitrite reductase; hemo 94.9 3.8 0.00013 45.0 23.5 75 138-228 168-244 (543)
82 1l0q_A Surface layer protein; 94.8 3.8 0.00013 41.1 21.9 66 141-227 24-91 (391)
83 3qqz_A Putative uncharacterize 94.7 4 0.00014 41.0 22.8 56 151-227 30-86 (255)
84 2g8s_A Glucose/sorbosone dehyd 94.7 0.52 1.8E-05 49.0 15.2 38 384-427 8-46 (353)
85 1l0q_A Surface layer protein; 94.3 4.9 0.00017 40.3 21.4 68 139-227 64-133 (391)
86 1cru_A Protein (soluble quinop 94.2 0.72 2.5E-05 50.0 15.3 40 383-427 16-55 (454)
87 2iwa_A Glutamine cyclotransfer 94.1 2.5 8.6E-05 42.8 18.1 33 395-428 207-239 (266)
88 3scy_A Hypothetical bacterial 93.4 1.5 5.1E-05 44.0 15.1 63 151-228 214-277 (361)
89 1nir_A Nitrite reductase; hemo 91.7 5.8 0.0002 43.5 18.2 60 151-229 283-343 (543)
90 3bws_A Protein LP49; two-domai 91.4 13 0.00046 37.6 22.4 57 151-228 257-321 (433)
91 2hqs_A Protein TOLB; TOLB, PAL 91.0 10 0.00036 39.4 18.6 26 151-177 182-210 (415)
92 3qqz_A Putative uncharacterize 89.9 1.7 5.7E-05 43.8 10.7 64 151-228 124-191 (255)
93 3nok_A Glutaminyl cyclase; bet 89.9 9.9 0.00034 38.7 16.4 27 395-422 236-262 (268)
94 3no2_A Uncharacterized protein 89.2 18 0.00062 35.6 25.6 68 495-579 175-254 (276)
95 3nol_A Glutamine cyclotransfer 89.1 10 0.00034 38.5 15.8 31 395-426 226-256 (262)
96 2p9w_A MAL S 1 allergenic prot 89.0 3.3 0.00011 43.5 12.5 20 207-230 137-156 (334)
97 3k26_A Polycomb protein EED; W 88.7 8.9 0.0003 37.4 14.9 76 143-229 11-92 (366)
98 4g56_B MGC81050 protein; prote 88.7 10 0.00035 38.4 15.9 60 151-227 185-244 (357)
99 4ery_A WD repeat-containing pr 88.7 13 0.00045 36.0 16.1 62 139-217 12-76 (312)
100 3bws_A Protein LP49; two-domai 88.2 24 0.00081 35.7 22.3 57 151-228 215-272 (433)
101 2ymu_A WD-40 repeat protein; u 87.2 7.6 0.00026 41.2 14.3 55 151-227 20-74 (577)
102 4g56_B MGC81050 protein; prote 86.8 2.2 7.6E-05 43.4 9.5 58 151-226 46-110 (357)
103 3sre_A PON1, serum paraoxonase 86.6 11 0.00039 39.5 14.9 70 141-228 212-284 (355)
104 3mbr_X Glutamine cyclotransfer 86.5 25 0.00084 35.1 16.6 30 395-425 205-234 (243)
105 3ow8_A WD repeat-containing pr 85.9 7.7 0.00026 38.7 12.8 50 151-217 210-259 (321)
106 3fm0_A Protein CIAO1; WDR39,SG 85.9 11 0.00038 37.7 14.0 53 151-217 109-161 (345)
107 1jmx_B Amine dehydrogenase; ox 85.9 8.7 0.0003 37.3 12.9 26 151-177 46-72 (349)
108 3ow8_A WD repeat-containing pr 85.6 13 0.00044 37.0 14.3 39 138-177 111-151 (321)
109 2iwa_A Glutamine cyclotransfer 85.6 32 0.0011 34.6 19.1 25 151-177 24-51 (266)
110 1fwx_A Nitrous oxide reductase 85.3 2.2 7.5E-05 48.2 9.1 75 142-228 270-348 (595)
111 3c75_H MADH, methylamine dehyd 85.1 45 0.0015 35.8 21.1 69 141-228 111-195 (426)
112 2ynn_A Coatomer subunit beta'; 85.0 13 0.00045 36.3 13.8 50 151-217 17-66 (304)
113 1got_B GT-beta; complex (GTP-b 84.9 15 0.00052 36.5 14.5 58 151-229 188-245 (340)
114 1jmx_B Amine dehydrogenase; ox 84.8 7.9 0.00027 37.6 12.0 58 151-228 3-61 (349)
115 2ecf_A Dipeptidyl peptidase IV 84.6 25 0.00086 38.8 17.3 19 151-170 212-230 (741)
116 3iz6_a 40S ribosomal protein R 84.2 12 0.0004 38.1 13.5 26 151-177 253-278 (380)
117 3f3f_A Nucleoporin SEH1; struc 84.0 20 0.00069 34.0 14.3 54 151-217 15-68 (351)
118 3sjl_D Methylamine dehydrogena 83.5 7.4 0.00025 41.5 11.9 57 151-229 36-97 (386)
119 1qks_A Cytochrome CD1 nitrite 83.2 61 0.0021 35.9 22.8 71 140-229 188-263 (567)
120 2ymu_A WD-40 repeat protein; u 82.8 17 0.00059 38.4 14.5 49 151-217 471-519 (577)
121 4gqb_B Methylosome protein 50; 82.7 14 0.00048 37.5 13.3 61 151-229 86-146 (344)
122 1got_B GT-beta; complex (GTP-b 82.4 24 0.00083 35.0 14.8 26 151-177 230-255 (340)
123 4h5i_A Guanine nucleotide-exch 82.0 30 0.001 35.1 15.5 74 138-231 166-240 (365)
124 3frx_A Guanine nucleotide-bind 81.3 31 0.0011 33.9 14.9 49 151-217 200-248 (319)
125 4gqb_B Methylosome protein 50; 81.0 15 0.00051 37.3 12.7 59 151-229 131-189 (344)
126 1sq9_A Antiviral protein SKI8; 80.5 36 0.0012 33.7 15.2 27 151-178 237-266 (397)
127 1pby_B Quinohemoprotein amine 80.5 40 0.0014 32.2 15.1 26 151-177 37-63 (337)
128 1jof_A Carboxy-CIS,CIS-muconat 80.0 52 0.0018 33.0 21.0 25 151-177 43-67 (365)
129 3vu4_A KMHSV2; beta-propeller 80.0 27 0.00093 35.1 14.3 59 151-229 199-259 (355)
130 2xyi_A Probable histone-bindin 79.9 28 0.00095 35.9 14.6 63 151-229 235-297 (430)
131 3fm0_A Protein CIAO1; WDR39,SG 79.8 38 0.0013 33.7 15.2 60 151-229 65-124 (345)
132 3vl1_A 26S proteasome regulato 79.7 35 0.0012 34.2 15.0 27 151-177 294-320 (420)
133 3azo_A Aminopeptidase; POP fam 79.5 38 0.0013 36.8 16.2 26 151-177 191-224 (662)
134 1k8k_C P40, ARP2/3 complex 41 79.0 26 0.0009 34.2 13.5 52 151-217 12-63 (372)
135 3azo_A Aminopeptidase; POP fam 78.8 30 0.001 37.7 15.0 26 151-177 133-168 (662)
136 3f3f_A Nucleoporin SEH1; struc 78.6 46 0.0016 31.5 15.0 72 151-226 114-187 (351)
137 3odt_A Protein DOA1; ubiquitin 78.2 30 0.001 32.7 13.3 49 151-217 188-236 (313)
138 4e54_B DNA damage-binding prot 78.1 21 0.00071 36.9 12.9 60 151-227 123-182 (435)
139 1pby_B Quinohemoprotein amine 78.1 49 0.0017 31.6 16.5 48 163-228 4-52 (337)
140 2hes_X YDR267CP; beta-propelle 77.9 30 0.001 34.2 13.6 64 151-228 62-125 (330)
141 3jrp_A Fusion protein of prote 77.8 53 0.0018 31.9 15.5 52 151-217 105-158 (379)
142 1xfd_A DIP, dipeptidyl aminope 77.5 16 0.00055 40.2 12.5 25 151-177 20-44 (723)
143 3pe7_A Oligogalacturonate lyas 77.4 52 0.0018 32.6 15.3 25 153-177 41-67 (388)
144 2wg3_C Hedgehog-interacting pr 77.3 6.6 0.00023 42.7 9.1 73 151-227 142-238 (463)
145 3sjl_D Methylamine dehydrogena 77.1 37 0.0013 36.0 14.7 69 141-228 71-155 (386)
146 1nr0_A Actin interacting prote 76.9 21 0.00073 38.9 13.2 59 151-229 151-209 (611)
147 1erj_A Transcriptional repress 76.8 23 0.0008 36.0 12.7 58 151-229 169-226 (393)
148 4a9v_A PHOX; hydrolase, beta-p 76.8 70 0.0024 36.1 17.2 71 310-417 480-553 (592)
149 1gxr_A ESG1, transducin-like e 76.5 54 0.0018 31.2 15.5 54 151-217 55-108 (337)
150 3mmy_A MRNA export factor; mRN 75.8 46 0.0016 32.0 14.1 52 151-216 43-96 (368)
151 2aq5_A Coronin-1A; WD40 repeat 75.7 70 0.0024 32.1 19.5 57 151-217 85-142 (402)
152 2ojh_A Uncharacterized protein 75.7 50 0.0017 30.5 17.6 25 151-177 45-69 (297)
153 2pm9_A Protein WEB1, protein t 75.4 24 0.00082 35.2 12.2 61 151-229 218-282 (416)
154 2hqs_A Protein TOLB; TOLB, PAL 75.4 79 0.0027 32.6 17.6 26 151-177 226-254 (415)
155 2z3z_A Dipeptidyl aminopeptida 75.3 61 0.0021 35.5 16.4 16 151-167 184-199 (706)
156 1sq9_A Antiviral protein SKI8; 75.1 52 0.0018 32.5 14.5 25 151-177 190-214 (397)
157 3ei3_B DNA damage-binding prot 74.1 65 0.0022 31.9 15.0 60 151-228 77-137 (383)
158 3dwl_C Actin-related protein 2 73.7 27 0.00092 34.5 11.9 54 151-217 104-157 (377)
159 3zwl_B Eukaryotic translation 73.7 66 0.0023 30.9 17.4 50 151-217 36-85 (369)
160 3i2n_A WD repeat-containing pr 73.7 22 0.00075 34.4 11.1 55 151-217 213-270 (357)
161 3lrv_A PRE-mRNA-splicing facto 73.7 23 0.00078 35.1 11.4 57 151-227 129-187 (343)
162 1xfd_A DIP, dipeptidyl aminope 73.4 1.1E+02 0.0038 33.4 18.0 16 151-167 176-191 (723)
163 2pm9_A Protein WEB1, protein t 73.3 26 0.00088 35.0 11.7 27 151-177 117-143 (416)
164 3dw8_B Serine/threonine-protei 73.2 15 0.0005 37.3 10.0 57 151-217 181-237 (447)
165 3jrp_A Fusion protein of prote 72.9 70 0.0024 31.0 14.6 64 151-228 151-227 (379)
166 2ojh_A Uncharacterized protein 72.7 59 0.002 30.0 17.3 40 307-354 218-258 (297)
167 3mkq_A Coatomer beta'-subunit; 72.6 35 0.0012 37.8 13.7 50 151-217 17-66 (814)
168 2cn3_A Xyloglucanase, beta-1,4 72.0 54 0.0018 37.3 15.3 38 308-354 246-283 (737)
169 2aq5_A Coronin-1A; WD40 repeat 71.5 87 0.003 31.4 21.8 51 151-216 135-186 (402)
170 2hes_X YDR267CP; beta-propelle 71.3 80 0.0027 31.0 14.8 61 151-229 111-172 (330)
171 1gxr_A ESG1, transducin-like e 71.1 72 0.0025 30.3 16.2 49 151-217 228-276 (337)
172 3dm0_A Maltose-binding peripla 71.0 68 0.0023 35.3 15.6 76 139-229 371-449 (694)
173 3k26_A Polycomb protein EED; W 70.7 52 0.0018 31.7 13.0 60 151-229 73-135 (366)
174 1erj_A Transcriptional repress 70.4 74 0.0025 32.2 14.6 50 151-217 127-176 (393)
175 3no2_A Uncharacterized protein 70.2 84 0.0029 30.7 18.6 28 387-416 157-185 (276)
176 3ei3_B DNA damage-binding prot 69.9 89 0.0031 30.9 15.3 39 139-178 241-281 (383)
177 3o4h_A Acylamino-acid-releasin 69.6 19 0.00064 38.8 10.3 26 151-177 153-182 (582)
178 4h5i_A Guanine nucleotide-exch 69.5 17 0.00058 36.9 9.5 61 151-231 273-333 (365)
179 2pbi_B Guanine nucleotide-bind 69.0 79 0.0027 31.6 14.3 60 151-229 158-217 (354)
180 2xzm_R RACK1; ribosome, transl 68.4 52 0.0018 32.5 12.7 26 151-177 217-242 (343)
181 1r5m_A SIR4-interacting protei 68.0 59 0.002 32.0 13.0 49 151-217 293-341 (425)
182 2xyi_A Probable histone-bindin 67.5 53 0.0018 33.8 12.9 66 151-228 185-250 (430)
183 4aow_A Guanine nucleotide-bind 67.3 89 0.003 29.8 13.9 26 151-177 219-244 (340)
184 2pm7_B Protein transport prote 66.9 63 0.0021 31.2 12.7 62 151-229 13-74 (297)
185 1pgu_A Actin interacting prote 66.7 36 0.0012 35.9 11.6 50 151-216 492-541 (615)
186 1k8k_C P40, ARP2/3 complex 41 66.6 83 0.0028 30.5 13.6 52 151-217 56-107 (372)
187 3dw8_B Serine/threonine-protei 65.8 1.1E+02 0.0039 30.5 18.8 27 151-177 230-256 (447)
188 1r5m_A SIR4-interacting protei 65.2 80 0.0027 31.0 13.3 50 151-217 251-300 (425)
189 3amr_A 3-phytase; beta-propell 65.1 1.4E+02 0.0048 31.4 16.7 25 395-419 230-256 (355)
190 3q6k_A 43.2 kDa salivary prote 65.1 1E+02 0.0035 32.6 14.7 136 151-353 223-369 (381)
191 3frx_A Guanine nucleotide-bind 65.0 1.1E+02 0.0037 29.9 15.3 74 140-228 7-83 (319)
192 3dwl_C Actin-related protein 2 64.1 46 0.0016 32.8 11.2 26 151-177 150-175 (377)
193 4aez_A CDC20, WD repeat-contai 63.5 1.2E+02 0.0042 30.4 14.6 49 151-217 263-314 (401)
194 3gre_A Serine/threonine-protei 63.3 16 0.00056 37.2 7.9 63 151-229 218-280 (437)
195 4a9v_A PHOX; hydrolase, beta-p 63.2 14 0.0005 41.5 7.9 96 310-416 388-497 (592)
196 1vyh_C Platelet-activating fac 63.1 58 0.002 33.3 12.2 58 151-229 112-169 (410)
197 3gre_A Serine/threonine-protei 63.0 52 0.0018 33.3 11.7 26 151-177 115-140 (437)
198 1vyh_C Platelet-activating fac 62.2 79 0.0027 32.3 13.0 50 151-217 154-203 (410)
199 1nr0_A Actin interacting prote 62.1 41 0.0014 36.6 11.3 60 148-229 19-78 (611)
200 2j04_A TAU60, YPL007P, hypothe 61.8 1.1E+02 0.0039 34.3 14.8 25 151-176 89-113 (588)
201 3vl1_A 26S proteasome regulato 61.7 76 0.0026 31.6 12.5 49 152-217 102-150 (420)
202 4ery_A WD repeat-containing pr 61.5 1.1E+02 0.0039 29.1 15.4 50 151-217 69-118 (312)
203 3zwl_B Eukaryotic translation 61.3 1.2E+02 0.004 29.1 20.1 51 151-217 179-229 (369)
204 3jro_A Fusion protein of prote 60.9 58 0.002 36.7 12.6 62 151-229 13-74 (753)
205 3lrv_A PRE-mRNA-splicing facto 60.7 39 0.0014 33.3 10.1 58 151-228 174-232 (343)
206 2oiz_A Aromatic amine dehydrog 59.8 34 0.0012 34.8 9.6 72 143-228 45-126 (361)
207 3nol_A Glutamine cyclotransfer 59.8 15 0.00051 37.2 6.6 63 153-227 177-242 (262)
208 1qks_A Cytochrome CD1 nitrite 59.5 2.1E+02 0.0072 31.5 20.8 35 141-176 232-272 (567)
209 4aez_A CDC20, WD repeat-contai 59.0 1.4E+02 0.0048 30.0 14.1 57 151-227 221-277 (401)
210 4a11_B DNA excision repair pro 58.5 1.4E+02 0.0047 29.2 13.6 28 151-178 190-217 (408)
211 2vdu_B TRNA (guanine-N(7)-)-me 58.4 1.1E+02 0.0038 31.4 13.4 63 151-227 153-215 (450)
212 2pm7_B Protein transport prote 57.3 1.4E+02 0.0047 28.7 15.7 53 151-218 103-157 (297)
213 1tl2_A L10, protein (tachylect 56.3 11 0.00037 37.7 4.8 30 549-578 40-69 (236)
214 1mda_H Methylamine dehydrogena 55.4 26 0.00089 36.7 7.9 71 139-228 56-142 (368)
215 2xzm_R RACK1; ribosome, transl 55.2 1.6E+02 0.0055 28.8 15.5 57 151-217 25-87 (343)
216 4a11_B DNA excision repair pro 54.9 1.4E+02 0.0049 29.1 13.0 59 151-226 103-161 (408)
217 3bg1_A Protein SEC13 homolog; 54.5 74 0.0025 31.1 10.8 26 151-177 17-42 (316)
218 4aow_A Guanine nucleotide-bind 54.3 77 0.0026 30.3 10.6 70 137-217 25-97 (340)
219 3sfz_A APAF-1, apoptotic pepti 53.7 1.1E+02 0.0036 36.1 13.6 50 151-217 619-668 (1249)
220 2ece_A 462AA long hypothetical 53.7 2.5E+02 0.0085 30.6 17.8 18 395-413 382-399 (462)
221 2ynn_A Coatomer subunit beta'; 53.4 1.6E+02 0.0055 28.3 16.3 39 139-177 129-170 (304)
222 2oiz_A Aromatic amine dehydrog 52.8 20 0.0007 36.5 6.5 61 141-217 298-358 (361)
223 1k32_A Tricorn protease; prote 52.6 94 0.0032 36.3 12.9 26 151-177 382-407 (1045)
224 3mmy_A MRNA export factor; mRN 52.5 36 0.0012 32.9 7.9 59 151-230 277-335 (368)
225 3i2n_A WD repeat-containing pr 51.8 1.2E+02 0.004 29.1 11.6 54 155-226 176-229 (357)
226 2ecf_A Dipeptidyl peptidase IV 49.7 1.3E+02 0.0046 32.9 12.9 26 151-177 40-71 (741)
227 3sfz_A APAF-1, apoptotic pepti 49.5 1.5E+02 0.0051 34.8 14.0 50 151-217 661-710 (1249)
228 3bg1_A Protein SEC13 homolog; 49.3 1.1E+02 0.0037 29.8 11.0 55 162-229 181-235 (316)
229 2z3z_A Dipeptidyl aminopeptida 49.2 2.9E+02 0.0099 30.0 20.3 26 151-177 261-291 (706)
230 1yfq_A Cell cycle arrest prote 49.2 41 0.0014 32.4 7.7 53 151-217 15-67 (342)
231 3jro_A Fusion protein of prote 48.9 2E+02 0.0069 32.2 14.5 52 151-217 103-156 (753)
232 2ece_A 462AA long hypothetical 48.5 46 0.0016 36.3 8.6 62 151-228 324-399 (462)
233 2pbi_B Guanine nucleotide-bind 48.3 2.2E+02 0.0074 28.3 16.4 51 151-217 200-251 (354)
234 3mkq_A Coatomer beta'-subunit; 48.2 3.1E+02 0.011 30.1 20.2 50 151-217 59-108 (814)
235 1pgu_A Actin interacting prote 46.5 2.4E+02 0.0083 29.4 13.9 27 151-177 164-190 (615)
236 3hxj_A Pyrrolo-quinoline quino 46.4 1.6E+02 0.0056 28.0 11.7 20 308-328 297-316 (330)
237 3odt_A Protein DOA1; ubiquitin 46.0 1.9E+02 0.0065 27.0 14.3 61 139-217 7-70 (313)
238 2mad_H Methylamine dehydrogena 44.6 58 0.002 33.6 8.5 34 142-176 60-103 (373)
239 3dm0_A Maltose-binding peripla 43.4 3.3E+02 0.011 29.7 14.9 50 151-217 434-483 (694)
240 3nok_A Glutaminyl cyclase; bet 42.4 25 0.00085 35.7 5.0 60 153-227 186-252 (268)
241 2vdu_B TRNA (guanine-N(7)-)-me 42.0 2.5E+02 0.0087 28.6 13.0 27 151-178 199-228 (450)
242 3q6k_A 43.2 kDa salivary prote 40.7 2.2E+02 0.0076 30.0 12.3 22 207-228 220-242 (381)
243 3iz6_a 40S ribosomal protein R 40.3 2.9E+02 0.0099 27.5 13.8 59 151-229 209-268 (380)
244 3zwu_A Alkaline phosphatase PH 40.0 65 0.0022 36.2 8.4 101 310-416 388-496 (592)
245 2xbg_A YCF48-like protein; pho 39.2 3E+02 0.01 27.3 13.6 17 309-326 253-269 (327)
246 1mda_H Methylamine dehydrogena 38.9 56 0.0019 34.2 7.3 59 141-217 306-367 (368)
247 2oaj_A Protein SNI1; WD40 repe 37.5 2.6E+02 0.0087 32.4 13.3 26 151-177 21-46 (902)
248 2oaj_A Protein SNI1; WD40 repe 37.1 3E+02 0.01 31.8 13.8 26 151-177 492-517 (902)
249 3o4h_A Acylamino-acid-releasin 37.0 49 0.0017 35.5 6.6 26 151-177 198-225 (582)
250 3zwu_A Alkaline phosphatase PH 35.2 2.5E+02 0.0087 31.4 12.2 22 209-233 386-407 (592)
251 1yr2_A Prolyl oligopeptidase; 32.9 1.9E+02 0.0065 32.3 10.9 26 151-177 166-196 (741)
252 4gga_A P55CDC, cell division c 32.2 1.8E+02 0.0061 29.5 9.7 70 139-229 311-383 (420)
253 3v9f_A Two-component system se 31.8 2E+02 0.0067 32.3 10.8 54 300-354 622-675 (781)
254 1yfq_A Cell cycle arrest prote 31.3 3.4E+02 0.012 25.6 13.3 51 151-217 154-205 (342)
255 2b4w_A Hypothetical protein, c 30.5 2.3E+02 0.0077 29.2 9.7 22 306-328 264-287 (315)
256 1z68_A Fibroblast activation p 30.3 1.2E+02 0.0043 33.1 8.7 26 151-177 63-97 (719)
257 1k32_A Tricorn protease; prote 30.0 4.8E+02 0.016 30.3 14.0 25 551-575 609-634 (1045)
258 3mbr_X Glutamine cyclotransfer 29.0 1.4E+02 0.0047 29.6 7.9 56 158-227 159-221 (243)
259 3v7d_B Cell division control p 26.3 5.1E+02 0.017 26.0 13.3 26 151-177 314-339 (464)
260 3amr_A 3-phytase; beta-propell 24.4 2E+02 0.0069 30.2 8.5 26 151-177 183-208 (355)
261 4a5s_A Dipeptidyl peptidase 4 23.3 70 0.0024 35.7 5.1 131 140-329 5-143 (740)
262 4ggc_A P55CDC, cell division c 23.2 4.1E+02 0.014 24.6 10.0 58 151-229 244-303 (318)
263 4e54_B DNA damage-binding prot 22.8 1.6E+02 0.0054 30.1 7.3 54 151-217 254-307 (435)
264 2j04_B YDR362CP, TAU91; beta p 21.4 7.7E+02 0.026 26.4 13.6 113 151-328 211-333 (524)
265 2gop_A Trilobed protease; beta 20.1 5.7E+02 0.019 24.3 13.0 26 151-177 62-92 (347)
No 1
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=100.00 E-value=3.2e-67 Score=577.74 Aligned_cols=353 Identities=29% Similarity=0.568 Sum_probs=271.3
Q ss_pred CCCcEEEEEeeCce--eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceee----CCCCcee
Q 006811 137 PQGLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHF----DTEFGLM 210 (630)
Q Consensus 137 p~G~~le~va~Gl~--~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~----~~e~GLL 210 (630)
+.||++|+||+||. |+|+++|||++||||+||.|+|++++ + ++. . .+++++|+.+.+.. .+|+|||
T Consensus 1 ~~gf~v~~va~gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~-~-~g~--~----~~~~~~~~~~~~~~g~~~~~e~Gll 72 (463)
T 2wg3_C 1 HNCFCIQEVVSGLRQPVGALHSGDGSQRLFILEKEGYVKILT-P-EGE--I----FKEPYLDIHKLVQSGIKGGDERGLL 72 (463)
T ss_dssp -CCEEEEEEEEEESSEEEEECCSSSSCCEEEEETTTEEEEEC-T-TSC--B----CSSCSEECTTTBCCCCSSSCCCSEE
T ss_pred CCceEEEEeccCCCCceEEEECCCCCeEEEEEeCCceEEEEe-C-CCC--e----eeeeecCCcceeccCccccCCCcce
Confidence 36899999999998 99999999988999999999999985 2 232 1 24678888654432 3599999
Q ss_pred eeeeCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCC
Q 006811 211 GMAFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKP 290 (630)
Q Consensus 211 GiAfhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~ 290 (630)
||||||+|++|++|||+|+.....+. + .+.....+|+||+++.... ..+++
T Consensus 73 gia~~P~f~~n~~lYv~yt~~~~~~~----------------------~--~~~~~~~~v~r~~~~~~~~-----~~~d~ 123 (463)
T 2wg3_C 73 SLAFHPNYKKNGKLYVSYTTNQERWA----------------------I--GPHDHILRVVEYTVSRKNP-----HQVDL 123 (463)
T ss_dssp EEEECTTHHHHCEEEEEEEECCCSSC----------------------S--SSSCEEEEEEEEEBCTTCT-----TSBCG
T ss_pred eeEeCCCCcCCCEEEEEEeCCCCCcc----------------------c--CCcccceEEEEEEEcCCCC-----CccCC
Confidence 99999999999999999997543211 0 1223457999999864311 13445
Q ss_pred CCcEEEEEeccCCCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCc
Q 006811 291 SEVRRIFTMGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSY 370 (630)
Q Consensus 291 ~~~~~Il~~~~P~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~Y 370 (630)
.++++|+++..+...|+|++|+|+| ||+|||++||+++..++..++|++.+++|||||||+||. +.+++|
T Consensus 124 ~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~---------~~~~~y 193 (463)
T 2wg3_C 124 RTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTD---------MCNVPY 193 (463)
T ss_dssp GGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCC---------CSSCSC
T ss_pred CCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCC---------cccccC
Confidence 5678888865567789999999999 999999999998766666679999999999999999994 235799
Q ss_pred cCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCC-----eeEEEec-cCC-CceeEEEeccCCCCCcccccCCCcCC
Q 006811 371 SIPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPS-----YFMCADV-GQD-VYEEVDIITRGGNYGWRLYEGPYLFT 443 (630)
Q Consensus 371 sIP~DNPF~~~~~~~pEI~A~GlRNP~r~afD~~~g~-----~l~~~Dv-G~d-~~EEIn~I~~G~NYGWp~~eG~~~~~ 443 (630)
+||+||||++..++++||||+||||||||+||+.+++ .+|++|+ |++ ..||||+|++|+||||+
T Consensus 194 ~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei~~i~~G~~yG~~--------- 264 (463)
T 2wg3_C 194 SIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNRSSARILQIIKGKDYESE--------- 264 (463)
T ss_dssp BCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC------CEEEEEEC----CCSC---------
T ss_pred cCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecccCCCCCCCCeEeeeccCCCCCCC---------
Confidence 9999999999999999999999999999999999762 5788999 665 47999999999999993
Q ss_pred CCCCCCCCCCCCCCCCCCceeeccCCccCCCCCCccccceeeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeE
Q 006811 444 PLETPGGITPLNSVSPIFPVLGYNHSEVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTT 523 (630)
Q Consensus 444 p~~~p~~~~~~~~~~~i~Pi~~y~H~~~~~~~gs~S~tGg~vYrG~~fP~l~G~ylfgD~~sg~lw~~~~~p~~sG~~~~ 523 (630)
+|++.|+|+ .+ .||+||+||+|++||+|+|.||++|+. ++||.+.+++.+ +.|..
T Consensus 265 -----------------~P~~~~~~~-----~g-~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~~~~~-~~~~~ 319 (463)
T 2wg3_C 265 -----------------PSLLEFKPF-----SN-GPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQSPVT-KQWQE 319 (463)
T ss_dssp -----------------CCCEECCC----------CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC------CCEE
T ss_pred -----------------CCeEEeeCC-----CC-ccccceEEEeCCCChhhcceEEEecCC-CcEEEEEeCCCC-ceeeE
Confidence 488999874 23 899999999999999999999999996 899999876643 34543
Q ss_pred EEeeeecCCCCcccccccCCcCCCCCCccceEEEcCCCcEEEEeC---------CeEEEEecCCCC
Q 006811 524 SKIPFSCARDSPIQCKVLPGNDLPSLGYIYSFGEDNRKDIFILTS---------DGVYRVVRPSRC 580 (630)
Q Consensus 524 ~~i~f~c~~~~p~~c~~~~g~~~~~~gri~sf~ed~dGeLYvlts---------~gIyRiv~ps~~ 580 (630)
..+. .+.. ..|. ...++||++|++|+||+|||+++ ++||||++|+++
T Consensus 320 ~~~~---~g~~-~~~~------~~~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~~p~~~ 375 (463)
T 2wg3_C 320 KPLC---LGTS-GSCR------GYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIVDPKRP 375 (463)
T ss_dssp EEEC---EEET-TSSC------SCCCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEECTTSC
T ss_pred EEee---cCCc-cccc------ccccCcceEEEECCCCCEEEEeccCCcccCCCCcEEEecCcccc
Confidence 3321 1111 1111 12468999999999999999995 359999998875
No 2
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=100.00 E-value=3.5e-57 Score=479.12 Aligned_cols=341 Identities=23% Similarity=0.375 Sum_probs=270.3
Q ss_pred CCCCCcEEEEEeeCce--eeEEEcCCCCce-EEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceee
Q 006811 135 NPPQGLCLEKIGNGSY--LNMVAHPDGSNR-AFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMG 211 (630)
Q Consensus 135 ~~p~G~~le~va~Gl~--~~ma~~pDGs~R-lfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLG 211 (630)
+.|+||++|+|+++|. |.|++.||| | |||+|+.|+|++++ + ++. . .+++.++. .|...+++|++|
T Consensus 3 ~~p~g~~~~~va~~l~~P~~i~~~pdG--~~l~V~e~~G~i~~~~-~-~g~--~-----~~~~~~~~-~v~~~g~~g~~g 70 (353)
T 2g8s_A 3 MAPATVNVEVLQDKLDHPWALAFLPDN--HGMLITLRGGELRHWQ-A-GKG--L-----SAPLSGVP-DVWAHGQGGLLD 70 (353)
T ss_dssp ---CCSEEEEEEEEESSEEEEEECSTT--CCEEEEETTTEEEEEE-T-TTE--E-----CCCCBSCC-CCCCSTTCSEEE
T ss_pred CCCCCcEEEEEECCCCCcEEEEEcCCC--CEEEEEeCCceEEEEe-C-CCc--e-----eeEecCCc-ccccCCCCCcee
Confidence 5688999999999998 999999999 7 99999999999986 3 232 1 23556663 566678999999
Q ss_pred eeeCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCC
Q 006811 212 MAFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPS 291 (630)
Q Consensus 212 iAfhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~ 291 (630)
|||||+|++|++|||+|+..... | ....+|+||+.+.... ...
T Consensus 71 ia~~pdf~~~g~lYv~~~~~~~~-------------------------g----~~~~~v~r~~~~~~~~--------~~~ 113 (353)
T 2g8s_A 71 VVLAPDFAQSRRIWLSYSEVGDD-------------------------G----KAGTAVGYGRLSDDLS--------KVT 113 (353)
T ss_dssp EEECTTHHHHCEEEEEEEEECSS-------------------------S----CEEEEEEEEEECTTSS--------BEE
T ss_pred EEECCCCCCCCEEEEEEeCCCCC-------------------------C----CceeEEEEEEECCCCC--------CCC
Confidence 99999999999999999864211 1 0136899999864321 123
Q ss_pred CcEEEEEeccCC---CCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCC
Q 006811 292 EVRRIFTMGLSF---NGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWG 368 (630)
Q Consensus 292 ~~~~Il~~~~P~---~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g 368 (630)
+.++|++ .+|. ..|++++|+|+| ||+|||++||.++. ..+|++.++.|||+||++||
T Consensus 114 ~~~~i~~-~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~----~~~q~~~~~~g~I~ri~~dG-------------- 173 (353)
T 2g8s_A 114 DFRTVFR-QMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQR----PTAQDLDKLQGKLVRLTDQG-------------- 173 (353)
T ss_dssp EEEEEEE-CSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCG----GGGGCTTSCTTEEEEEETTS--------------
T ss_pred ceEEEEE-ECCCCCCCcccCccEEECC-CCcEEEEECCCCCC----CccCCCCCCCeEEEEECCCC--------------
Confidence 4566765 5663 579999999999 99999999998762 37899999999999999999
Q ss_pred CccCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeeEEEeccCCCceeEEEeccCCCCCcccccCCCcCCCCCCC
Q 006811 369 SYSIPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLETP 448 (630)
Q Consensus 369 ~YsIP~DNPF~~~~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn~I~~G~NYGWp~~eG~~~~~p~~~p 448 (630)
+||+||||++..+..+||||+||||||+++||+.+| +||++|+|++..||||+|++|+|||||.+++...|++...+
T Consensus 174 --~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g-~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~ 250 (353)
T 2g8s_A 174 --EIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSN-ALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIP 250 (353)
T ss_dssp --CCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTT-EEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCT
T ss_pred --CCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCC-CEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccC
Confidence 799999999988889999999999999999999777 69999999999999999999999999999987766543111
Q ss_pred CCCCCCCCCCCCCceeeccCCccCCCCCCccccceeeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeee
Q 006811 449 GGITPLNSVSPIFPVLGYNHSEVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPF 528 (630)
Q Consensus 449 ~~~~~~~~~~~i~Pi~~y~H~~~~~~~gs~S~tGg~vYrG~~fP~l~G~ylfgD~~sg~lw~~~~~p~~sG~~~~~~i~f 528 (630)
... ......++.|++.|.|. .|++|+.||+|.+||+|+|.||++|+..++||.+..+ .+... .+..|
T Consensus 251 ~~~-~~~~~~~~~P~~~~~~~--------~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~---~~~~~-~~~~~ 317 (353)
T 2g8s_A 251 EAK-GEIVAGTEQPVFYWKDS--------PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVN---GDKVT-EDGRI 317 (353)
T ss_dssp TCC-BSSCTTSCCCSEEESSC--------CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEE---TTEEE-EEEEE
T ss_pred ccc-CCCCCCccCCeEEeCCC--------cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeC---CCeEe-eeEEc
Confidence 100 01112468999999653 7999999999999999999999999999999999865 13221 11111
Q ss_pred ecCCCCcccccccCCcCCCCCCccceEEEcCCCcEEEEeC---CeEEEEec
Q 006811 529 SCARDSPIQCKVLPGNDLPSLGYIYSFGEDNRKDIFILTS---DGVYRVVR 576 (630)
Q Consensus 529 ~c~~~~p~~c~~~~g~~~~~~gri~sf~ed~dGeLYvlts---~gIyRiv~ 576 (630)
+. ...+||+++++++||+|||+++ +.||||++
T Consensus 318 ------------~~----~~~~rp~~v~~~pdG~lyv~td~~~g~I~ri~~ 352 (353)
T 2g8s_A 318 ------------LT----DRGQRIRDVRTGPDGYLYVLTDESSGELLKVSP 352 (353)
T ss_dssp ------------SG----GGCCCEEEEEECTTSCEEEEECSTTEEEEEEEC
T ss_pred ------------cc----CCCCceeEEEECCCCcEEEEEeCCCCEEEEEeC
Confidence 11 1246999999999999999965 46999986
No 3
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=100.00 E-value=2.6e-54 Score=473.43 Aligned_cols=356 Identities=23% Similarity=0.394 Sum_probs=260.1
Q ss_pred CCCCCcEEEEEeeCce--eeEEEcCCCCceEEEEecCc-eEEEEEccCCCCCceeeecCCCCCcCCcccee-eCCCCcee
Q 006811 135 NPPQGLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQEG-KIWLATIPEQGLGETMELDASSPFADLTDEVH-FDTEFGLM 210 (630)
Q Consensus 135 ~~p~G~~le~va~Gl~--~~ma~~pDGs~RlfV~eq~G-~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~-~~~e~GLL 210 (630)
+.|+||++|+|++||. |+|++.||| ||||+|+.| +|++++ +++|.. .+++++...+. ..+|+|||
T Consensus 12 ~~~~gf~~~~~a~~l~~P~~~a~~pdG--~l~V~e~~gg~I~~~~-~~~g~~--------~~~~~~~~~~~~~~g~~Gll 80 (454)
T 1cru_A 12 AKSENFDKKVILSNLNKPHALLWGPDN--QIWLTERATGKILRVN-PESGSV--------KTVFQVPEIVNDADGQNGLL 80 (454)
T ss_dssp CCCTTSCEEEEECCCSSEEEEEECTTS--CEEEEETTTCEEEEEC-TTTCCE--------EEEEECTTCCCCTTSSCSEE
T ss_pred CCCCCeEEEEEECCCCCceEEEEcCCC--cEEEEEcCCCEEEEEE-CCCCcE--------eEEecCCccccccCCCCcee
Confidence 5678999999999998 999999999 899999986 799885 333321 22344432221 24799999
Q ss_pred eeeeCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCC
Q 006811 211 GMAFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKP 290 (630)
Q Consensus 211 GiAfhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~ 290 (630)
||||||+|++|++|||+|+....... + .. .....+|+||+.+... .++
T Consensus 81 gia~~Pdf~~~g~lYv~~s~~~~~~~---------------------~-~~--~~~~~~v~r~~~~~~~--------~~~ 128 (454)
T 1cru_A 81 GFAFHPDFKNNPYIYISGTFKNPKST---------------------D-KE--LPNQTIIRRYTYNKST--------DTL 128 (454)
T ss_dssp EEEECTTTTTSCEEEEEEEEECTTC------------------------CC--SCEEEEEEEEEEETTT--------TEE
T ss_pred EEEECCCcCcCCEEEEEEeccccCCC---------------------c-cc--cccccEEEEEEECCCC--------CCc
Confidence 99999999999999999996322110 0 00 0124699999986432 122
Q ss_pred CCcEEEEEeccCC-CCccceeeEEcCCCCeEEEEeCCCCCCC-----Ccc----------cccccCCCCCeeEEEEecCC
Q 006811 291 SEVRRIFTMGLSF-NGHHGGQLLFGPTDGYMYFMMGDGGGTA-----DPY----------NFSQNKKSLLGKITRLDVDN 354 (630)
Q Consensus 291 ~~~~~Il~~~~P~-~~H~GG~L~FGp~DG~LYv~~GDgg~~~-----DP~----------~~aQn~~sl~GKILRIdvDg 354 (630)
.+.++|++ .+|. ..|++++|+|+| ||+|||++||+++.. +|. .++|++.+++||||||++||
T Consensus 129 ~~~~~i~~-~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG 206 (454)
T 1cru_A 129 EKPVDLLA-GLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDG 206 (454)
T ss_dssp EEEEEEEE-EECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTS
T ss_pred CCcEEEEE-cCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCC
Confidence 34567775 4564 579999999999 999999999987531 111 14899999999999999999
Q ss_pred CCchhhhhhcccCCCccCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeeEEEeccCCCceeEEEeccCCCCCcc
Q 006811 355 IPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWR 434 (630)
Q Consensus 355 ~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn~I~~G~NYGWp 434 (630)
+||+||||++ ++++||||+|||||+||+||+ +| +||++|+|++..||||+|++|+|||||
T Consensus 207 ----------------~ip~~Npf~~--~~~~ei~a~G~RNp~gla~dp-~G-~L~~~d~g~~~~dein~i~~G~nYGWP 266 (454)
T 1cru_A 207 ----------------SIPKDNPSFN--GVVSHIYTLGHRNPQGLAFTP-NG-KLLQSEQGPNSDDEINLIVKGGNYGWP 266 (454)
T ss_dssp ----------------CCCTTCCEET--TEECSEEEBCCSEEEEEEECT-TS-CEEEEEECSSSCEEEEECCTTCBCCTT
T ss_pred ----------------CCCCCCCCCC--CCcceEEEECCCCcceEEECC-CC-CEEEEecCCCCCeEEEEecCCCCCCCC
Confidence 7999999985 578999999999999999999 57 599999999999999999999999999
Q ss_pred cccCCC---------------------cCCCCCCCCCCC-----CCCCCCCCCceeecc-------CCccC------CCC
Q 006811 435 LYEGPY---------------------LFTPLETPGGIT-----PLNSVSPIFPVLGYN-------HSEVN------KKE 475 (630)
Q Consensus 435 ~~eG~~---------------------~~~p~~~p~~~~-----~~~~~~~i~Pi~~y~-------H~~~~------~~~ 475 (630)
.++|.. .|++...+.+.. ......++.|++.|. |.+.. -..
T Consensus 267 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~y~~~~i~~~~p~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~G~~~~~~~ 346 (454)
T 1cru_A 267 NVAGYKDDSGYAYANYSAAANKSIKDLAQNGVKVAAGVPVTKESEWTGKNFVPPLKTLYTVQDTYNYNDPTCGEMTYICW 346 (454)
T ss_dssp TCSSSSSCSSCCEECGGGSSCTTCCCCCSTTSSCCTTCCEECGGGCCCSSBCCCSEEECCCCTTCCSCCGGGTTCGGGGS
T ss_pred ceecCcccCccccccccccccccccccccCCcccCccccccccccccCCCcCCCceeccccccccccccccccccccccc
Confidence 999742 112111110000 000124678988652 22100 013
Q ss_pred CCccccceeeecCC--CCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccccccCCcCCCCCCccc
Q 006811 476 GSASITGGYFYRSM--TDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGNDLPSLGYIY 553 (630)
Q Consensus 476 gs~S~tGg~vYrG~--~fP~l~G~ylfgD~~sg~lw~~~~~p~~sG~~~~~~i~f~c~~~~p~~c~~~~g~~~~~~gri~ 553 (630)
++.|++|+.||+|. .+|+|+|.+|++++..++|+.+..++++. .++.....| +. .++||+
T Consensus 347 ~~~ap~G~~fy~g~~~~~~~~~g~lfv~~~~~~~i~~v~l~~~g~-~~~~~~~~~------------~~-----~~~R~~ 408 (454)
T 1cru_A 347 PTVAPSSAYVYKGGKKAITGWENTLLVPSLKRGVIFRIKLDPTYS-TTYDDAVPM------------FK-----SNNRYR 408 (454)
T ss_dssp SCCCBCCCEECCCCTTCCTTCTTEEEEEBSSSCCEEEEEECTTSS-SEEEEEEEE------------SC-----CSSCEE
T ss_pred CccCcceeEEeCCCCccCcccCCcEEEeecCCCEEEEEEECCCCC-eeeeeeeee------------cc-----cCCCce
Confidence 57899999999998 56789999999999999999998764321 243222221 11 257999
Q ss_pred eEEEcCCCc-EEEEeCC--eEEE
Q 006811 554 SFGEDNRKD-IFILTSD--GVYR 573 (630)
Q Consensus 554 sf~ed~dGe-LYvlts~--gIyR 573 (630)
++.+++||. |||++++ .|||
T Consensus 409 dv~~gpDG~~Lyv~~d~~G~i~~ 431 (454)
T 1cru_A 409 DVIASPDGNVLYVLTDTAGNVQK 431 (454)
T ss_dssp EEEECTTSSCEEEEECSSCCEEC
T ss_pred eEEECCCCCEEEEEECCCCCCcc
Confidence 999999998 9999973 3554
No 4
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=100.00 E-value=6.4e-54 Score=456.25 Aligned_cols=311 Identities=24% Similarity=0.413 Sum_probs=246.0
Q ss_pred CCcEEEEEeeCce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeee
Q 006811 138 QGLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAF 214 (630)
Q Consensus 138 ~G~~le~va~Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAf 214 (630)
....+|+|++||. |.|+++||| ||||+|| .|+|++++ ++++.. .++..+ +.|...+|+|||||||
T Consensus 20 ~~~~~~~va~gL~~P~~ia~~pdG--~llVter~~G~I~~v~-~~~g~~--------~~v~~~-~~v~~~g~~GllGia~ 87 (347)
T 3das_A 20 SVKVLRTVATGLNSPWGLAPLPGG--DLLVSSRDEATITRVD-AKTGRK--------TELGEV-PGVSPSGEGGLLGIAL 87 (347)
T ss_dssp CEEEEEEEECCCSSEEEEEECTTS--CEEEEETTTCEEEEEC-TTTCCE--------EEEEEC-TTCCCBTTBSEEEEEE
T ss_pred CCceeEEeecCCCCceEEEEcCCC--cEEEEEecCCEEEEEE-CCCCcE--------eeeccc-CceeecCCCCceeeEe
Confidence 3589999999998 999999999 7999999 99999985 333321 112223 3567789999999999
Q ss_pred CCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcE
Q 006811 215 HPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVR 294 (630)
Q Consensus 215 hPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~ 294 (630)
||+|++|++|||+|+... ..+|+||+.++... ......+.+
T Consensus 88 ~Pdf~~~g~lYv~yt~~~----------------------------------~~~v~R~~~~~~~~-----~~~~~~~~~ 128 (347)
T 3das_A 88 SPDYASDHMVYAYFTSAS----------------------------------DNRIVRMLYDEKKP-----SGEQLGAPD 128 (347)
T ss_dssp CTTHHHHCEEEEEEECSS----------------------------------SEEEEEEEBCTTSC-----TTCCBCCCE
T ss_pred ccccccCCEEEEEEecCC----------------------------------CCEEEEEEeCCCCc-----ccccCCCcE
Confidence 999999999999998531 14899999865311 012344667
Q ss_pred EEEEeccCC-CCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCC
Q 006811 295 RIFTMGLSF-NGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIP 373 (630)
Q Consensus 295 ~Il~~~~P~-~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP 373 (630)
+|++ ++|. ..|++++|+|+| ||+|||++||.++. ..+|+++++.||||||++|| +||
T Consensus 129 ~i~~-~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~----~~~qd~~~~~G~IlRi~~dG----------------~ip 186 (347)
T 3das_A 129 TVFR-GIPKGVIHNGGRIAFGP-DKMLYAGTGESGDT----GLSQDRKSLGGKILRMTPDG----------------EPA 186 (347)
T ss_dssp EEEE-EECCCSSCCCCCEEECT-TSCEEEECBCTTCG----GGTTCTTCSTTCEEEECTTS----------------SBC
T ss_pred EEEE-cCCCCCCccCccccCCC-CCCEEEEECCCCCC----ccccCCCCCCCEEEEEeCCC----------------Ccc
Confidence 7885 4564 579999999999 99999999998764 46899999999999999999 799
Q ss_pred CCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeeEEEeccCCCceeEEEeccCCCCCcccccCCCcCCCCCCCCCCCC
Q 006811 374 KDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLETPGGITP 453 (630)
Q Consensus 374 ~DNPF~~~~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn~I~~G~NYGWp~~eG~~~~~p~~~p~~~~~ 453 (630)
+||||.+ .||||+|||||+|++||+ +| .||++|+|++..||||+|++|+|||||+++|...
T Consensus 187 ~~nPf~~-----~~i~a~G~RNp~Gla~dp-~G-~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~------------ 247 (347)
T 3das_A 187 PGNPFPG-----SPVYSYGHRNVQGLAWDD-KQ-RLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGG------------ 247 (347)
T ss_dssp TTCSSTT-----CCEEEBCCSBCCEEEECT-TC-CEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCC------------
T ss_pred CCCCCCC-----CeEEeeCCCCcceEEECC-CC-CEEEEecCCCCCceeeEEcCCCEecCCcccCCCC------------
Confidence 9999974 589999999999999999 56 5999999999999999999999999999988521
Q ss_pred CCCCCCCCceeeccCCccCCCCCCccccceeeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCC
Q 006811 454 LNSVSPIFPVLGYNHSEVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARD 533 (630)
Q Consensus 454 ~~~~~~i~Pi~~y~H~~~~~~~gs~S~tGg~vYrG~~fP~l~G~ylfgD~~sg~lw~~~~~p~~sG~~~~~~i~f~c~~~ 533 (630)
...++.|++.|.|+ +.|++|+.||+| ..|++++..++||.+..+.. + . + .
T Consensus 248 --~~~~~~P~~~~~~~-------~~ap~G~~~~~g--------~~~~~~l~~~~l~~v~~~~~--~-~----~-----~- 297 (347)
T 3das_A 248 --GSGFHDPVAQWSTD-------EASPSGIAYAEG--------SVWMAGLRGERLWRIPLKGT--A-A----A-----A- 297 (347)
T ss_dssp --CTTCCCCSEEECTT-------TCCEEEEEEETT--------EEEEEESTTCSEEEEEEETT--E-E----S-----S-
T ss_pred --CccccCCcEecCCC-------CCCCcceEEEcC--------ceeeccccCCEEEEEEecCC--c-e----e-----c-
Confidence 01378899999753 369999999975 56667777788888876432 1 0 0 0
Q ss_pred CcccccccCCcCCCCCCccceEEEcCCCcEEEEeCC------------eEEEEec
Q 006811 534 SPIQCKVLPGNDLPSLGYIYSFGEDNRKDIFILTSD------------GVYRVVR 576 (630)
Q Consensus 534 ~p~~c~~~~g~~~~~~gri~sf~ed~dGeLYvlts~------------gIyRiv~ 576 (630)
. ...++.+ .++||+++.+++||.|||++++ +|+||+.
T Consensus 298 ~--~e~~l~~----~~gR~~dv~~~pDG~lyv~td~~~g~g~p~~~ddri~r~~~ 346 (347)
T 3das_A 298 D--PQAFLEG----EYGRLRTVAPAGGDKLWLVTSNTDGRGDAKGGDDRILELEV 346 (347)
T ss_dssp C--CEEESTT----TSSCEEEEEEEETTEEEEEECTTSSSSCCCTTCSCEEEEEE
T ss_pred c--eEEeecC----CCCCccEEEECCCCcEEEEEcCCCCCCCCCCCCCEEEEEeC
Confidence 0 0012233 3789999999999999999862 5999974
No 5
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=100.00 E-value=5.4e-52 Score=440.23 Aligned_cols=323 Identities=26% Similarity=0.411 Sum_probs=257.3
Q ss_pred CCCCCcEEEEEeeCce--eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeee
Q 006811 135 NPPQGLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGM 212 (630)
Q Consensus 135 ~~p~G~~le~va~Gl~--~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGi 212 (630)
+.+.+|++|+|++||. +.|++.||| ||||+|+.|+|++++ .+|. + ++.++. |...++.|++||
T Consensus 14 ~~~~~~~~~~va~~l~~P~~ia~~pdG--~l~V~e~~g~I~~~d--~~G~-~--------~~~~~~--v~~~g~~g~~gi 78 (354)
T 3a9g_A 14 SEEWKFKISEVASDLEVPWSIAPLGGG--RYLVTERPGRLVLIS--PSGK-K--------LVASFD--VANVGEAGLLGL 78 (354)
T ss_dssp --CCCEEEEEEECSCSCEEEEEEEETT--EEEEEETTTEEEEEC--SSCE-E--------EEEECC--CCCSTTCSEEEE
T ss_pred CCCCCeEEEEEeCCCCCCeEEEEcCCC--eEEEEeCCCEEEEEe--CCCc-e--------Eeeccc--eeecCCCceeeE
Confidence 4467999999999998 999999999 899999999999984 2332 2 233442 556678999999
Q ss_pred eeCCCCCCCCEEEEEEee-cCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCC
Q 006811 213 AFHPNFAKNGRFFASFNC-DKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPS 291 (630)
Q Consensus 213 AfhPdF~~Ng~~YvsYs~-~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~ 291 (630)
||||+|++|++|||+|+. .... ....+|.||+.++.. ....
T Consensus 79 a~~pdf~~~g~lyv~~~~~~~~~------------------------------~~~~~v~r~~~~~~~--------~~~~ 120 (354)
T 3a9g_A 79 ALHPEFPKKSWVYLYASYFAEGG------------------------------HIRNRVIRGRLDGST--------FKLK 120 (354)
T ss_dssp EECTTTTTSCEEEEEEEEECGGG------------------------------CEEEEEEEEEECSSS--------CCEE
T ss_pred EeCCCCCcCCEEEEEEeccCCCC------------------------------CcceEEEEEEECCCC--------cCcC
Confidence 999999999999999985 2110 013589999986431 1223
Q ss_pred CcEEEEEeccCC-CCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCc
Q 006811 292 EVRRIFTMGLSF-NGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSY 370 (630)
Q Consensus 292 ~~~~Il~~~~P~-~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~Y 370 (630)
+.++|++ ++|. ..|++++|+|+| ||+|||++||.++. ..+|++.++.|||+||++||
T Consensus 121 ~~~~l~~-~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~----~~~~d~~~~~G~I~ri~~dG---------------- 178 (354)
T 3a9g_A 121 EVKTLID-GIPGAYIHNGGRIRFGP-DGMLYITTGDAADP----RLAQDLSSLAGKILRVDEEG---------------- 178 (354)
T ss_dssp EEEEEEE-EEECCSSCCCCCEEECT-TSCEEEECCCTTCG----GGGTCTTCCSSEEEEECTTS----------------
T ss_pred ccEEEEE-cCCCCCCcCCceEEECC-CCcEEEEECCCCCC----ccccCCCCCCeEEEEEcCCC----------------
Confidence 4566665 4453 579999999999 99999999997643 46899999999999999999
Q ss_pred cCCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeeEEEeccCCCceeEEEeccCCCCCcccccCCCcCCCCCCCCC
Q 006811 371 SIPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLETPGG 450 (630)
Q Consensus 371 sIP~DNPF~~~~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn~I~~G~NYGWp~~eG~~~~~p~~~p~~ 450 (630)
+||+||||. ..||||+|||||+|++||+.++ +||++|+|++..||||+|++|+|||||.++|....
T Consensus 179 ~~p~~npf~-----~~~i~a~G~rnp~Gla~d~~~g-~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~-------- 244 (354)
T 3a9g_A 179 RPPADNPFP-----NSPIWSYGHRNPQGIDWHRASG-VMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGR-------- 244 (354)
T ss_dssp CCCTTSSST-----TCCEEEECCSCCCEEEECTTTC-CEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCC--------
T ss_pred CCCCCCCCC-----CCcEEEEccCCcceEEEeCCCC-CEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCC--------
Confidence 799999995 4799999999999999999777 59999999999999999999999999999885221
Q ss_pred CCCCCCCCCCCceeeccCCccCCCCCCccccceeeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeec
Q 006811 451 ITPLNSVSPIFPVLGYNHSEVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSC 530 (630)
Q Consensus 451 ~~~~~~~~~i~Pi~~y~H~~~~~~~gs~S~tGg~vYrG~~fP~l~G~ylfgD~~sg~lw~~~~~p~~sG~~~~~~i~f~c 530 (630)
..++.|++.|++ ++.|++|+.||+|++||+++|.+|++|+..++||.+..+.. |..... ..
T Consensus 245 ------~~~~~p~~~~~~-------~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~--g~~~~~-~~--- 305 (354)
T 3a9g_A 245 ------GEFVDPVIDTGS-------ETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDN--MEVRKI-ST--- 305 (354)
T ss_dssp ------TTSCCCSEECTT-------CCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGG--GCEEEE-EE---
T ss_pred ------CCCcCCEeecCC-------CCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCC--Ccccce-ee---
Confidence 125689999953 34799999999999999999999999999999999987542 322111 11
Q ss_pred CCCCcccccccCCcCCCCCCccceEEEcCCCcEEEEeC---C---------eEEEEecCC
Q 006811 531 ARDSPIQCKVLPGNDLPSLGYIYSFGEDNRKDIFILTS---D---------GVYRVVRPS 578 (630)
Q Consensus 531 ~~~~p~~c~~~~g~~~~~~gri~sf~ed~dGeLYvlts---~---------gIyRiv~ps 578 (630)
++.+ ..+||+++++++||+|||+++ + +||||.+..
T Consensus 306 ---------~~~~----~~~rp~~v~~~pDG~lyv~~~~~~G~g~~~~~~g~i~ri~~~g 352 (354)
T 3a9g_A 306 ---------FFKN----VFGRLRDVVIDDDGGILISTSNRDGRGSLRAGDDKILKIVSEQ 352 (354)
T ss_dssp ---------ECTT----TSCCEEEEEECTTSCEEEEECTTSSSSCCCTTCSCEEEEEETT
T ss_pred ---------eccC----CCCCeeEEEECCCCcEEEEEeCCCCCcCCCCCCCEEEEEecCC
Confidence 1111 257999999999999999985 3 699999754
No 6
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=1.9e-47 Score=404.09 Aligned_cols=311 Identities=27% Similarity=0.435 Sum_probs=245.7
Q ss_pred CCcEEEEEeeCce--eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeC
Q 006811 138 QGLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFH 215 (630)
Q Consensus 138 ~G~~le~va~Gl~--~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfh 215 (630)
..+++|+|++||. +.|++.||| ||||+|+.|+|++++ ++.. +++.++. |...++.|++|||||
T Consensus 19 ~~~~~~~va~~l~~P~~ia~~pdG--~l~V~e~~g~I~~i~---~g~~--------~~~~~~~--v~~~g~~~p~gia~~ 83 (352)
T 2ism_A 19 QGLRVEEVVGGLEVPWALAFLPDG--GMLIAERPGRIRLFR---EGRL--------STYAELS--VYHRGESGLLGLALH 83 (352)
T ss_dssp -CCCEEEEECCCSCEEEEEECTTS--CEEEEETTTEEEEEE---TTEE--------EEEEECC--CCCSTTCSEEEEEEC
T ss_pred CCcEEEEEECCCCCceEEEEcCCC--eEEEEeCCCeEEEEE---CCCc--------cEeecce--EeecCCCCceeEEEC
Confidence 4689999999997 999999999 799999999999986 3432 2334443 556788999999999
Q ss_pred CCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEE
Q 006811 216 PNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRR 295 (630)
Q Consensus 216 PdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~ 295 (630)
|+|++|++|||+|+.... ....+|.||+.++. ...+.++
T Consensus 84 pdf~~~g~lYv~~~~~~~-------------------------------~~~~~v~r~~~~~~----------~~~~~~~ 122 (352)
T 2ism_A 84 PRFPQEPYVYAYRTVAEG-------------------------------GLRNQVVRLRHLGE----------RGVLDRV 122 (352)
T ss_dssp TTTTTSCEEEEEEEECTT-------------------------------SSEEEEEEEEECSS----------CEEEEEE
T ss_pred CCCCCCCEEEEEEecCCC-------------------------------CCccEEEEEEeCCC----------CcCceEE
Confidence 999999999999986321 01358999987532 1224456
Q ss_pred EEEeccC---CCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccC
Q 006811 296 IFTMGLS---FNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSI 372 (630)
Q Consensus 296 Il~~~~P---~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsI 372 (630)
|++ ++| ...|++++|+|+| ||+|||++||.++. ..+|+..++.|||+||++|| +|
T Consensus 123 l~~-~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~----~~~~d~~~~~g~I~ri~~dG----------------~~ 180 (352)
T 2ism_A 123 VLD-GIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYER----ELAQDLASLGGKILRLTPEG----------------EP 180 (352)
T ss_dssp EEE-EECCCTTCCCCCCCEEECT-TSCEEEECCCTTCG----GGGGCTTCSSSEEEEECTTS----------------SB
T ss_pred EEE-eCCCCCCCCcCCceEEECC-CCCEEEEECCCCCC----ccccCCCCCceEEEEEcCCC----------------CC
Confidence 665 455 4579999999999 99999999997653 46899999999999999998 79
Q ss_pred CCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeeEEEeccCCC-----ceeEEEeccCCCCCcccccCCCcCCCCCC
Q 006811 373 PKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDV-----YEEVDIITRGGNYGWRLYEGPYLFTPLET 447 (630)
Q Consensus 373 P~DNPF~~~~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~-----~EEIn~I~~G~NYGWp~~eG~~~~~p~~~ 447 (630)
|+||||++..+.++||||+|||||++++||+.++ +||++|+|++. .||||+|.+|+|||||.++|....
T Consensus 181 p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g-~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~----- 254 (352)
T 2ism_A 181 APGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTG-ELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGND----- 254 (352)
T ss_dssp CTTCTTTTCTTSCTTEEEECCSEECCCEECTTTC-CEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCC-----
T ss_pred CCCCcccCCCCCCccEEEEcCCCcccEEEECCCC-CEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCC-----
Confidence 9999999988889999999999999999999777 59999999998 899999999999999999884210
Q ss_pred CCCCCCCCCCCCCCceeeccCCccCCCCCCccccceeeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEE-e
Q 006811 448 PGGITPLNSVSPIFPVLGYNHSEVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSK-I 526 (630)
Q Consensus 448 p~~~~~~~~~~~i~Pi~~y~H~~~~~~~gs~S~tGg~vYrG~~fP~l~G~ylfgD~~sg~lw~~~~~p~~sG~~~~~~-i 526 (630)
..++.|++.|++ +.+|+|+.||+ |.+|++|+..++||.+..+... ..|+... .
T Consensus 255 ---------~~~~~p~~~~~~--------~~ap~G~~~~~--------G~l~v~~~~~~~v~~v~~~~~~-~~~~~~~~~ 308 (352)
T 2ism_A 255 ---------PRYRDPLYFWPQ--------GFPPGNLAFFR--------GDLYVAGLRGQALLRLVLEGER-GRWRVLRVE 308 (352)
T ss_dssp ---------TTSCCCSEECTT--------CCCEEEEEEET--------TEEEEEETTTTEEEEEEEEEET-TEEEEEEEE
T ss_pred ---------CCCcCCeEecCC--------CCCCcceEEEC--------CEEEEEECCCCEEEEEEECCCC-cceeecchh
Confidence 025689999953 37999999965 4678999999999998865432 1221111 1
Q ss_pred eeecCCCCcccccccCCcCCCCCCccceEEEcCCCcEEEEeC---C---------eEEEEe
Q 006811 527 PFSCARDSPIQCKVLPGNDLPSLGYIYSFGEDNRKDIFILTS---D---------GVYRVV 575 (630)
Q Consensus 527 ~f~c~~~~p~~c~~~~g~~~~~~gri~sf~ed~dGeLYvlts---~---------gIyRiv 575 (630)
. ++ ..++||+++++++||+|||+++ + +||||+
T Consensus 309 ~------------~~-----~~~~rp~~v~~~pdG~lyv~~~~~~g~g~~~~~~~~i~ri~ 352 (352)
T 2ism_A 309 T------------AL-----SGFGRLREVQVGPDGALYVTTSNRDGRGQVRPGDDRVLRLL 352 (352)
T ss_dssp E------------EE-----ESSCCEEEEEECTTSCEEEEECSTTTTSCCCTTCSCEEEEC
T ss_pred e------------ec-----ccCCCeeEEEECCCCcEEEEEeCCCCCCCCCCCCCEEEEeC
Confidence 1 11 1257999999999999999985 3 599985
No 7
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.53 E-value=7.6e-05 Score=74.17 Aligned_cols=176 Identities=15% Similarity=0.185 Sum_probs=102.0
Q ss_pred CCCcEEEEEeeCce--eeEEEcCCCCceEEEEe-cCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeee
Q 006811 137 PQGLCLEKIGNGSY--LNMVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMA 213 (630)
Q Consensus 137 p~G~~le~va~Gl~--~~ma~~pDGs~RlfV~e-q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiA 213 (630)
.++..+++++.++. .++++.|||. ++|+++ ..|.|++++ ++.+ ++ +.........+|+
T Consensus 15 ~~~~~~~~l~~~~~~~eg~~~d~~g~-~l~~~~~~~~~i~~~~-~~~~----~~-------------~~~~~~~~~~~l~ 75 (296)
T 3e5z_A 15 PAGAEARRLADGFTWTEGPVYVPARS-AVIFSDVRQNRTWAWS-DDGQ----LS-------------PEMHPSHHQNGHC 75 (296)
T ss_dssp CTTCCCEEEECCCSSEEEEEEEGGGT-EEEEEEGGGTEEEEEE-TTSC----EE-------------EEESSCSSEEEEE
T ss_pred CCCCcEEEEecCCccccCCeEeCCCC-EEEEEeCCCCEEEEEE-CCCC----eE-------------EEECCCCCcceee
Confidence 34667788888876 7899999994 477666 578999886 3322 11 1112334578999
Q ss_pred eCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCc
Q 006811 214 FHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEV 293 (630)
Q Consensus 214 fhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~ 293 (630)
++| +|.+|+.-... ..|.+|.... .+.
T Consensus 76 ~~~----dg~l~v~~~~~------------------------------------~~i~~~d~~~-------------g~~ 102 (296)
T 3e5z_A 76 LNK----QGHLIACSHGL------------------------------------RRLERQREPG-------------GEW 102 (296)
T ss_dssp ECT----TCCEEEEETTT------------------------------------TEEEEECSTT-------------CCE
T ss_pred ECC----CCcEEEEecCC------------------------------------CeEEEEcCCC-------------CcE
Confidence 997 67888753210 1566664311 122
Q ss_pred EEEEEeccCC-CCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccC
Q 006811 294 RRIFTMGLSF-NGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSI 372 (630)
Q Consensus 294 ~~Il~~~~P~-~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsI 372 (630)
+.+... ... ....-..|.|+| ||.||++....+...+............|+|+|++.++.
T Consensus 103 ~~~~~~-~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~----------------- 163 (296)
T 3e5z_A 103 ESIADS-FEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT----------------- 163 (296)
T ss_dssp EEEECE-ETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC-----------------
T ss_pred EEEeec-cCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCCCC-----------------
Confidence 333211 111 112234699999 999999753211000000000111223578999998762
Q ss_pred CCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeeEEEeccCCC
Q 006811 373 PKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDV 418 (630)
Q Consensus 373 P~DNPF~~~~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~ 418 (630)
.+.+.-++..|.+++|++.. ..| ++|.+.+.
T Consensus 164 -------------~~~~~~~~~~~~gi~~s~dg-~~l-v~~~~~~~ 194 (296)
T 3e5z_A 164 -------------LSAPIRDRVKPNGLAFLPSG-NLL-VSDTGDNA 194 (296)
T ss_dssp -------------EEEEECCCSSEEEEEECTTS-CEE-EEETTTTE
T ss_pred -------------EEEeecCCCCCccEEECCCC-CEE-EEeCCCCe
Confidence 24456678889999999975 345 88876543
No 8
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.50 E-value=0.00011 Score=72.70 Aligned_cols=269 Identities=12% Similarity=0.070 Sum_probs=146.0
Q ss_pred EEEEeeCce--eeEEEcCCCCceEEEE--------ecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceee
Q 006811 142 LEKIGNGSY--LNMVAHPDGSNRAFFS--------NQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMG 211 (630)
Q Consensus 142 le~va~Gl~--~~ma~~pDGs~RlfV~--------eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLG 211 (630)
.++|+.++. ..+++.+|| ++||+ ...|.|++++ ++.+. ... +.. +.. ........+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~g--~l~~~~~~~~~~~~~~~~i~~~d-~~~g~--~~~------~~~--~~~-~~~~~~~~~ 75 (314)
T 1pjx_A 10 FTKVTEDIPGAEGPVFDKNG--DFYIVAPEVEVNGKPAGEILRID-LKTGK--KTV------ICK--PEV-NGYGGIPAG 75 (314)
T ss_dssp CEEEECCCTTCEEEEECTTS--CEEEEETTCEETTEECCEEEEEC-TTTCC--EEE------EEC--CEE-TTEECCEEE
T ss_pred HhhhhccCCCccCceECCCC--CEEEEEeccccCCCCCCEEEEEe-CCCCc--EEE------EEe--ccc-CCCCCCCce
Confidence 466788876 789999998 79999 4678999885 33332 111 100 000 001235789
Q ss_pred eeeCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCC
Q 006811 212 MAFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPS 291 (630)
Q Consensus 212 iAfhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~ 291 (630)
++++|+ +|++||.-.. ..|.+|..+ .
T Consensus 76 i~~~~~---~g~l~v~~~~-------------------------------------~~l~~~d~~-g------------- 101 (314)
T 1pjx_A 76 CQCDRD---ANQLFVADMR-------------------------------------LGLLVVQTD-G------------- 101 (314)
T ss_dssp EEECSS---SSEEEEEETT-------------------------------------TEEEEEETT-S-------------
T ss_pred EEEecC---CCcEEEEECC-------------------------------------CCEEEEeCC-C-------------
Confidence 999973 3888885421 145556532 1
Q ss_pred CcEEE-EEeccCCCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCc
Q 006811 292 EVRRI-FTMGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSY 370 (630)
Q Consensus 292 ~~~~I-l~~~~P~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~Y 370 (630)
+.+.+ ...........-..|.|++ ||.|||+....+.. +.+.........+.|+|++.++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~g~--------------- 163 (314)
T 1pjx_A 102 TFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVA--PADYTRSMQEKFGSIYCFTTDGQ--------------- 163 (314)
T ss_dssp CEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCT--TSCCCBTTSSSCEEEEEECTTSC---------------
T ss_pred CEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccc--cccccccccCCCCeEEEECCCCC---------------
Confidence 12222 1100000112234799999 99999987543211 10111122345689999987752
Q ss_pred cCCCCCCCCCCCCCCCeEEEeccccceeeeec----CCCCCeeEEEeccCCCceeEEEeccCCCCCcccccCCCcCCCCC
Q 006811 371 SIPKDNPFSEDSGLQPEIWALGLRNPWRCSFD----SDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLE 446 (630)
Q Consensus 371 sIP~DNPF~~~~~~~pEI~A~GlRNP~r~afD----~~~g~~l~~~DvG~d~~EEIn~I~~G~NYGWp~~eG~~~~~p~~ 446 (630)
.+.+..++..|.+++|+ +.. ..||++|.+.+..-.++.-..|. +.
T Consensus 164 ---------------~~~~~~~~~~~~~i~~~~~~d~dg-~~l~v~~~~~~~i~~~~~~~~g~---~~------------ 212 (314)
T 1pjx_A 164 ---------------MIQVDTAFQFPNGIAVRHMNDGRP-YQLIVAETPTKKLWSYDIKGPAK---IE------------ 212 (314)
T ss_dssp ---------------EEEEEEEESSEEEEEEEECTTSCE-EEEEEEETTTTEEEEEEEEETTE---EE------------
T ss_pred ---------------EEEeccCCCCcceEEEecccCCCC-CEEEEEECCCCeEEEEECCCCCc---cc------------
Confidence 13345567788999999 864 36999987654322222111110 00
Q ss_pred CCCCCCCCCCCCCCCceeeccCCccCCCCCC-ccccceeeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEE
Q 006811 447 TPGGITPLNSVSPIFPVLGYNHSEVNKKEGS-ASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSK 525 (630)
Q Consensus 447 ~p~~~~~~~~~~~i~Pi~~y~H~~~~~~~gs-~S~tGg~vYrG~~fP~l~G~ylfgD~~sg~lw~~~~~p~~sG~~~~~~ 525 (630)
....+..++. .. ..+.++.+- -.|.+++++...+.|..+. ++ +|... ..
T Consensus 213 ------------~~~~~~~~~~-------~~~~~p~~i~~d-------~~G~l~v~~~~~~~i~~~d--~~-~g~~~-~~ 262 (314)
T 1pjx_A 213 ------------NKKVWGHIPG-------THEGGADGMDFD-------EDNNLLVANWGSSHIEVFG--PD-GGQPK-MR 262 (314)
T ss_dssp ------------EEEEEEECCC-------CSSCEEEEEEEB-------TTCCEEEEEETTTEEEEEC--TT-CBSCS-EE
T ss_pred ------------cceEEEECCC-------CCCCCCCceEEC-------CCCCEEEEEcCCCEEEEEc--CC-CCcEe-EE
Confidence 0001111110 00 133343331 1477888888777777764 32 13221 11
Q ss_pred eeeecCCCCcccccccCCcCCCCCCccceEEEcCCCc-EEEEeCC--eEEEEec
Q 006811 526 IPFSCARDSPIQCKVLPGNDLPSLGYIYSFGEDNRKD-IFILTSD--GVYRVVR 576 (630)
Q Consensus 526 i~f~c~~~~p~~c~~~~g~~~~~~gri~sf~ed~dGe-LYvlts~--gIyRiv~ 576 (630)
+. . ....+.++..++||. ||+.+.+ +|+++..
T Consensus 263 ~~--------~-----------~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 263 IR--------C-----------PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp EE--------C-----------SSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred Ee--------C-----------CCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 10 0 024678899999998 9999865 8999864
No 9
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.48 E-value=1.2e-05 Score=82.06 Aligned_cols=28 Identities=7% Similarity=0.161 Sum_probs=22.5
Q ss_pred CCccceEEEcCCCcEEEEeC--CeEEEEec
Q 006811 549 LGYIYSFGEDNRKDIFILTS--DGVYRVVR 576 (630)
Q Consensus 549 ~gri~sf~ed~dGeLYvlts--~gIyRiv~ 576 (630)
+..+.+++.++||.|||++. +.|+++..
T Consensus 291 ~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 291 FDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp CSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred cCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 45789999999999999986 45777653
No 10
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.45 E-value=0.00014 Score=71.00 Aligned_cols=233 Identities=12% Similarity=0.133 Sum_probs=134.5
Q ss_pred eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..|+..++| ++||++. .+.|++++ ++ +. ...+ .+ ........+|+++| +|.+|+.-.
T Consensus 65 ~~i~~~~~g--~l~v~~~~~~~v~~~d-~~-g~--~~~~-------~~-----~~~~~~~~~i~~~~----~g~l~v~~~ 122 (300)
T 2qc5_A 65 MCLIVSSLG--DIWFTENGANKIGKLS-KK-GG--FTEY-------PL-----PQPDSGPYGITEGL----NGDIWFTQL 122 (300)
T ss_dssp EEEEECTTS--CEEEEETTTTEEEEEC-TT-SC--EEEE-------EC-----SSTTCCEEEEEECS----TTCEEEEET
T ss_pred eeEEECCCC--CEEEEecCCCeEEEEC-CC-CC--eEEe-------cC-----CCCCCCCccceECC----CCCEEEEcc
Confidence 778888998 6999987 68898875 33 32 1110 00 11235678999986 678888532
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCCCCccce
Q 006811 230 CDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGG 309 (630)
Q Consensus 230 ~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~~~H~GG 309 (630)
.. ..|.++..+ .+.+.+ .++.....-.
T Consensus 123 ~~------------------------------------~~i~~~~~~--------------g~~~~~---~~~~~~~~~~ 149 (300)
T 2qc5_A 123 NG------------------------------------DRIGKLTAD--------------GTIYEY---DLPNKGSYPA 149 (300)
T ss_dssp TT------------------------------------TEEEEECTT--------------SCEEEE---ECSSTTCCEE
T ss_pred CC------------------------------------CeEEEECCC--------------CCEEEc---cCCCCCCCce
Confidence 10 155555422 112211 2333334456
Q ss_pred eeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCeEE
Q 006811 310 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 389 (630)
Q Consensus 310 ~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI~ 389 (630)
.|.+++ ||.||++.-. .++|.|++.++.. ..+.+|
T Consensus 150 ~i~~d~-~g~l~v~~~~-----------------~~~i~~~~~~g~~-----------~~~~~~---------------- 184 (300)
T 2qc5_A 150 FITLGS-DNALWFTENQ-----------------NNSIGRITNTGKL-----------EEYPLP---------------- 184 (300)
T ss_dssp EEEECT-TSSEEEEETT-----------------TTEEEEECTTCCE-----------EEEECS----------------
T ss_pred eEEECC-CCCEEEEecC-----------------CCeEEEECCCCcE-----------EEeeCC----------------
Confidence 799999 9999997643 2458888876520 001111
Q ss_pred EeccccceeeeecCCCCCeeEEEeccCCCceeEEEeccCCCCCcccccCCCcCCCCCCCCCCCCCCCCCCCCceeeccCC
Q 006811 390 ALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLETPGGITPLNSVSPIFPVLGYNHS 469 (630)
Q Consensus 390 A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn~I~~G~NYGWp~~eG~~~~~p~~~p~~~~~~~~~~~i~Pi~~y~H~ 469 (630)
.++..|.++++|+. + .||+++.+.+ .|.++...+. +. .+..+
T Consensus 185 -~~~~~~~~i~~d~~-g-~l~v~~~~~~---~i~~~~~~g~--~~----------------------------~~~~~-- 226 (300)
T 2qc5_A 185 -TNAAAPVGITSGND-G-ALWFVEIMGN---KIGRITTTGE--IS----------------------------EYDIP-- 226 (300)
T ss_dssp -STTCCEEEEEECTT-S-SEEEEETTTT---EEEEECTTCC--EE----------------------------EEECS--
T ss_pred -CCCCCcceEEECCC-C-CEEEEccCCC---EEEEEcCCCc--EE----------------------------EEECC--
Confidence 13467899999985 4 5999997654 3443322100 00 00000
Q ss_pred ccCCCCCCccccceeeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccccccCCcCCCCC
Q 006811 470 EVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGNDLPSL 549 (630)
Q Consensus 470 ~~~~~~gs~S~tGg~vYrG~~fP~l~G~ylfgD~~sg~lw~~~~~p~~sG~~~~~~i~f~c~~~~p~~c~~~~g~~~~~~ 549 (630)
.+...|.++.+- | .|.+++++...++|..+.. .|... .+.+ + ...
T Consensus 227 -----~~~~~~~~i~~d-----~--~g~l~v~~~~~~~i~~~~~----~g~~~--~~~~-------------~----~~~ 271 (300)
T 2qc5_A 227 -----TPNARPHAITAG-----K--NSEIWFTEWGANQIGRITN----DNTIQ--EYQL-------------Q----TEN 271 (300)
T ss_dssp -----STTCCEEEEEEC-----S--TTCEEEEETTTTEEEEECT----TSCEE--EEEC-------------C----STT
T ss_pred -----CCCCCceEEEEC-----C--CCCEEEeccCCCeEEEECC----CCcEE--EEEC-------------C----ccC
Confidence 011345555442 2 3678888887788877653 24433 1211 0 012
Q ss_pred CccceEEEcCCCcEEEEeCCeEEEEec
Q 006811 550 GYIYSFGEDNRKDIFILTSDGVYRVVR 576 (630)
Q Consensus 550 gri~sf~ed~dGeLYvlts~gIyRiv~ 576 (630)
..|.++.+|++|.||+.+.++|+|+.+
T Consensus 272 ~~~~~i~~~~~g~l~v~~~~~i~~~~p 298 (300)
T 2qc5_A 272 AEPHGITFGKDGSVWFALKCKIGKLNL 298 (300)
T ss_dssp CCCCCEEECTTSCEEEECSSEEEEEEE
T ss_pred CccceeEeCCCCCEEEEccCceEEeCC
Confidence 457899999999999998658998865
No 11
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.43 E-value=0.00013 Score=73.44 Aligned_cols=169 Identities=13% Similarity=0.118 Sum_probs=100.5
Q ss_pred CcEEEEEeeCce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeC
Q 006811 139 GLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFH 215 (630)
Q Consensus 139 G~~le~va~Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfh 215 (630)
+-.+|++++|.. .++++.|||. +||+++. .|+|++++ + ++. + .+.........+++++
T Consensus 34 ~~~~~~l~~~~~~~egp~~~~~g~-~l~~~d~~~~~i~~~~-~-~g~---~-------------~~~~~~~~~~~gl~~d 94 (305)
T 3dr2_A 34 DARLLTLYDQATWSEGPAWWEAQR-TLVWSDLVGRRVLGWR-E-DGT---V-------------DVLLDATAFTNGNAVD 94 (305)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGT-EEEEEETTTTEEEEEE-T-TSC---E-------------EEEEESCSCEEEEEEC
T ss_pred CCceEEEecCCcCccCCeEeCCCC-EEEEEECCCCEEEEEe-C-CCC---E-------------EEEeCCCCccceeeEC
Confidence 346788998887 6789999994 5777775 68999885 3 232 1 1111223446789999
Q ss_pred CCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEE
Q 006811 216 PNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRR 295 (630)
Q Consensus 216 PdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~ 295 (630)
| +|++|+.-... .+|.+|..++ +.++
T Consensus 95 ~----dG~l~v~~~~~------------------------------------~~v~~~~~~g--------------~~~~ 120 (305)
T 3dr2_A 95 A----QQRLVHCEHGR------------------------------------RAITRSDADG--------------QAHL 120 (305)
T ss_dssp T----TSCEEEEETTT------------------------------------TEEEEECTTS--------------CEEE
T ss_pred C----CCCEEEEECCC------------------------------------CEEEEECCCC--------------CEEE
Confidence 7 67888753210 1566664321 2233
Q ss_pred EEEeccCC-CCccceeeEEcCCCCeEEEEe---CCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcc
Q 006811 296 IFTMGLSF-NGHHGGQLLFGPTDGYMYFMM---GDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYS 371 (630)
Q Consensus 296 Il~~~~P~-~~H~GG~L~FGp~DG~LYv~~---GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~Ys 371 (630)
+.. .... ....-..|.+++ ||.||++- |... +............+.|+|+|+++.
T Consensus 121 ~~~-~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~---~~~~~~~~~~~~~~~v~~~d~~~g---------------- 179 (305)
T 3dr2_A 121 LVG-RYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRK---PSQGCPADPELAHHSVYRLPPDGS---------------- 179 (305)
T ss_dssp EEC-EETTEECSCCCCEEECT-TSCEEEECCSGGGSC---GGGSCCCCCSSSCEEEEEECSSSC----------------
T ss_pred EEe-ccCCCccCCCCCEEECC-CCCEEEeCcCCCccc---cccccccccccCCCeEEEEcCCCC----------------
Confidence 321 1111 112234599999 99999963 2210 000001111223588999998541
Q ss_pred CCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeeEEEeccC
Q 006811 372 IPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQ 416 (630)
Q Consensus 372 IP~DNPF~~~~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~ 416 (630)
..+.++ ++..|.+++|++.. ..||++|...
T Consensus 180 -------------~~~~~~-~~~~p~gl~~spdg-~~lyv~~~~~ 209 (305)
T 3dr2_A 180 -------------PLQRMA-DLDHPNGLAFSPDE-QTLYVSQTPE 209 (305)
T ss_dssp -------------CCEEEE-EESSEEEEEECTTS-SEEEEEECCC
T ss_pred -------------cEEEEe-cCCCCcceEEcCCC-CEEEEEecCC
Confidence 124456 88999999999975 4699998753
No 12
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.40 E-value=0.00042 Score=69.57 Aligned_cols=156 Identities=10% Similarity=0.001 Sum_probs=94.1
Q ss_pred eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
-+.++.|++. ++|+++. .++|++++ ++.+. . + +. .......+|+++| +|.+|+..
T Consensus 16 Egp~w~~~~~-~l~~~d~~~~~i~~~d-~~~~~--~-~-------------~~-~~~~~~~~i~~~~----dG~l~v~~- 71 (297)
T 3g4e_A 16 ESPVWEEVSN-SLLFVDIPAKKVCRWD-SFTKQ--V-Q-------------RV-TMDAPVSSVALRQ----SGGYVATI- 71 (297)
T ss_dssp EEEEEETTTT-EEEEEETTTTEEEEEE-TTTCC--E-E-------------EE-ECSSCEEEEEEBT----TSSEEEEE-
T ss_pred cCCeEECCCC-EEEEEECCCCEEEEEE-CCCCc--E-E-------------EE-eCCCceEEEEECC----CCCEEEEE-
Confidence 5678888653 7888885 68999886 33221 1 1 00 1123467889987 56787753
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCCCCccce
Q 006811 230 CDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGG 309 (630)
Q Consensus 230 ~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~~~H~GG 309 (630)
. ..|.+|.... .+.+.+...........-.
T Consensus 72 -~------------------------------------~~l~~~d~~~-------------g~~~~~~~~~~~~~~~~~~ 101 (297)
T 3g4e_A 72 -G------------------------------------TKFCALNWKE-------------QSAVVLATVDNDKKNNRFN 101 (297)
T ss_dssp -T------------------------------------TEEEEEETTT-------------TEEEEEEECCTTCSSEEEE
T ss_pred -C------------------------------------CeEEEEECCC-------------CcEEEEEecCCCCCCCCCC
Confidence 1 1466665421 1233343221101122234
Q ss_pred eeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCeEE
Q 006811 310 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 389 (630)
Q Consensus 310 ~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI~ 389 (630)
.|.++| ||.||+++-.... .........|+|+|++.++. ....
T Consensus 102 di~~d~-dG~l~~~~~~~~~------~~~~~~~~~~~l~~~d~~g~------------------------------~~~~ 144 (297)
T 3g4e_A 102 DGKVDP-AGRYFAGTMAEET------APAVLERHQGALYSLFPDHH------------------------------VKKY 144 (297)
T ss_dssp EEEECT-TSCEEEEEEECCS------BTTBCCTTCEEEEEECTTSC------------------------------EEEE
T ss_pred CEEECC-CCCEEEecCCccc------ccccccCCCcEEEEEECCCC------------------------------EEEE
Confidence 699999 9999997532211 11123346789999998772 2345
Q ss_pred EeccccceeeeecCCCCCeeEEEeccCCC
Q 006811 390 ALGLRNPWRCSFDSDRPSYFMCADVGQDV 418 (630)
Q Consensus 390 A~GlRNP~r~afD~~~g~~l~~~DvG~d~ 418 (630)
.-++..|.+++|++.. ..||++|...+.
T Consensus 145 ~~~~~~pngi~~spdg-~~lyv~~~~~~~ 172 (297)
T 3g4e_A 145 FDQVDISNGLDWSLDH-KIFYYIDSLSYS 172 (297)
T ss_dssp EEEESBEEEEEECTTS-CEEEEEEGGGTE
T ss_pred eeccccccceEEcCCC-CEEEEecCCCCc
Confidence 6678889999999975 469999987654
No 13
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.37 E-value=0.0004 Score=67.62 Aligned_cols=233 Identities=14% Similarity=0.200 Sum_probs=134.7
Q ss_pred eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..|+..+|| ++||++. .|.|.+++ ++ +. ...+ .+ ........+|+++| +|.+|+.-.
T Consensus 23 ~~i~~d~~g--~l~v~~~~~~~v~~~~-~~-~~--~~~~-------~~-----~~~~~~~~~i~~~~----~g~l~v~~~ 80 (300)
T 2qc5_A 23 YGITSSEDG--KVWFTQHKANKISSLD-QS-GR--IKEF-------EV-----PTPDAKVMCLIVSS----LGDIWFTEN 80 (300)
T ss_dssp EEEEECTTS--CEEEEETTTTEEEEEC-TT-SC--EEEE-------EC-----SSTTCCEEEEEECT----TSCEEEEET
T ss_pred ceeeECCCC--CEEEEcCCCCeEEEEC-CC-Cc--eEEE-------EC-----CCCCCcceeEEECC----CCCEEEEec
Confidence 788999998 6999996 68898875 33 22 1110 01 01234578999985 678888632
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCCCCccce
Q 006811 230 CDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGG 309 (630)
Q Consensus 230 ~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~~~H~GG 309 (630)
.. .+|.+|..+ .+.+. + ..|...+.-.
T Consensus 81 ~~------------------------------------~~v~~~d~~--------------g~~~~-~--~~~~~~~~~~ 107 (300)
T 2qc5_A 81 GA------------------------------------NKIGKLSKK--------------GGFTE-Y--PLPQPDSGPY 107 (300)
T ss_dssp TT------------------------------------TEEEEECTT--------------SCEEE-E--ECSSTTCCEE
T ss_pred CC------------------------------------CeEEEECCC--------------CCeEE-e--cCCCCCCCCc
Confidence 10 156666432 11222 1 2333334556
Q ss_pred eeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCeEE
Q 006811 310 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 389 (630)
Q Consensus 310 ~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI~ 389 (630)
.|.+++ ||.|||+... .++|+|++.++.-. .+.+|
T Consensus 108 ~i~~~~-~g~l~v~~~~-----------------~~~i~~~~~~g~~~-----------~~~~~---------------- 142 (300)
T 2qc5_A 108 GITEGL-NGDIWFTQLN-----------------GDRIGKLTADGTIY-----------EYDLP---------------- 142 (300)
T ss_dssp EEEECS-TTCEEEEETT-----------------TTEEEEECTTSCEE-----------EEECS----------------
T ss_pred cceECC-CCCEEEEccC-----------------CCeEEEECCCCCEE-----------EccCC----------------
Confidence 799999 9999998542 24688888775200 01111
Q ss_pred EeccccceeeeecCCCCCeeEEEeccCCCceeEEEeccCCCCCcccccCCCcCCCCCCCCCCCCCCCCCCCCceeeccCC
Q 006811 390 ALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLETPGGITPLNSVSPIFPVLGYNHS 469 (630)
Q Consensus 390 A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn~I~~G~NYGWp~~eG~~~~~p~~~p~~~~~~~~~~~i~Pi~~y~H~ 469 (630)
.....|.++++|+. + +||+++.+.. .|.++...+. .. .+..+.
T Consensus 143 -~~~~~~~~i~~d~~-g-~l~v~~~~~~---~i~~~~~~g~----------------------------~~--~~~~~~- 185 (300)
T 2qc5_A 143 -NKGSYPAFITLGSD-N-ALWFTENQNN---SIGRITNTGK----------------------------LE--EYPLPT- 185 (300)
T ss_dssp -STTCCEEEEEECTT-S-SEEEEETTTT---EEEEECTTCC----------------------------EE--EEECSS-
T ss_pred -CCCCCceeEEECCC-C-CEEEEecCCC---eEEEECCCCc----------------------------EE--EeeCCC-
Confidence 13457889999986 4 4999987653 3433322100 00 000110
Q ss_pred ccCCCCCCccccceeeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccccccCCcCCCCC
Q 006811 470 EVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGNDLPSL 549 (630)
Q Consensus 470 ~~~~~~gs~S~tGg~vYrG~~fP~l~G~ylfgD~~sg~lw~~~~~p~~sG~~~~~~i~f~c~~~~p~~c~~~~g~~~~~~ 549 (630)
....+.++.+- | .|.+++++...++|+.+.. .|.+.. +.+ + ...
T Consensus 186 ------~~~~~~~i~~d-----~--~g~l~v~~~~~~~i~~~~~----~g~~~~--~~~-------------~----~~~ 229 (300)
T 2qc5_A 186 ------NAAAPVGITSG-----N--DGALWFVEIMGNKIGRITT----TGEISE--YDI-------------P----TPN 229 (300)
T ss_dssp ------TTCCEEEEEEC-----T--TSSEEEEETTTTEEEEECT----TCCEEE--EEC-------------S----STT
T ss_pred ------CCCCcceEEEC-----C--CCCEEEEccCCCEEEEEcC----CCcEEE--EEC-------------C----CCC
Confidence 11234454442 1 3678888887777877653 344322 111 1 013
Q ss_pred CccceEEEcCCCcEEEEe--CCeEEEEec
Q 006811 550 GYIYSFGEDNRKDIFILT--SDGVYRVVR 576 (630)
Q Consensus 550 gri~sf~ed~dGeLYvlt--s~gIyRiv~ 576 (630)
.++.++.+|++|.||+.+ +++|+|+..
T Consensus 230 ~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 230 ARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 468899999999999999 467998865
No 14
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.26 E-value=0.0012 Score=64.24 Aligned_cols=233 Identities=14% Similarity=0.199 Sum_probs=133.6
Q ss_pred eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..|++.+|| ++||++. .|.|++++ ++ +. ...+ .+ ........+|+++| +|.+|+.-.
T Consensus 18 ~~i~~d~~g--~l~v~~~~~~~v~~~d-~~-~~--~~~~-------~~-----~~~~~~~~~i~~~~----~g~l~v~~~ 75 (299)
T 2z2n_A 18 YGITVSDKG--KVWITQHKANMISCIN-LD-GK--ITEY-------PL-----PTPDAKVMCLTISS----DGEVWFTEN 75 (299)
T ss_dssp EEEEECTTS--CEEEEETTTTEEEEEC-TT-CC--EEEE-------EC-----SSTTCCEEEEEECT----TSCEEEEET
T ss_pred cceEECCCC--CEEEEecCCCcEEEEc-CC-CC--eEEe-------cC-----CcccCceeeEEECC----CCCEEEeCC
Confidence 788999998 6999997 68898875 33 32 1110 00 01235688999996 678888632
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCCCCccce
Q 006811 230 CDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGG 309 (630)
Q Consensus 230 ~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~~~H~GG 309 (630)
.. .+|.+|..+ .+.+. + .+|...+.-.
T Consensus 76 ~~------------------------------------~~i~~~~~~--------------g~~~~-~--~~~~~~~~~~ 102 (299)
T 2z2n_A 76 AA------------------------------------NKIGRITKK--------------GIIKE-Y--TLPNPDSAPY 102 (299)
T ss_dssp TT------------------------------------TEEEEECTT--------------SCEEE-E--ECSSTTCCEE
T ss_pred CC------------------------------------CeEEEECCC--------------CcEEE-E--eCCCcCCCce
Confidence 10 156666421 11222 2 2343334556
Q ss_pred eeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCeEE
Q 006811 310 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 389 (630)
Q Consensus 310 ~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI~ 389 (630)
.|.+++ ||.||++... .++|.++|+++.. ..+.+|
T Consensus 103 ~i~~~~-~g~l~v~~~~-----------------~~~i~~~d~~g~~-----------~~~~~~---------------- 137 (299)
T 2z2n_A 103 GITEGP-NGDIWFTEMN-----------------GNRIGRITDDGKI-----------REYELP---------------- 137 (299)
T ss_dssp EEEECT-TSCEEEEETT-----------------TTEEEEECTTCCE-----------EEEECS----------------
T ss_pred eeEECC-CCCEEEEecC-----------------CceEEEECCCCCE-----------EEecCC----------------
Confidence 799999 9999998643 2458888876520 011111
Q ss_pred EeccccceeeeecCCCCCeeEEEeccCCCceeEEEeccCCCCCcccccCCCcCCCCCCCCCCCCCCCCCCCCceeeccCC
Q 006811 390 ALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLETPGGITPLNSVSPIFPVLGYNHS 469 (630)
Q Consensus 390 A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn~I~~G~NYGWp~~eG~~~~~p~~~p~~~~~~~~~~~i~Pi~~y~H~ 469 (630)
....+|.++++|+. + ++|+++.+.. .|.++...+.. . .+..+.
T Consensus 138 -~~~~~~~~i~~~~~-g-~l~v~~~~~~---~i~~~~~~g~~-----------------------------~-~~~~~~- 180 (299)
T 2z2n_A 138 -NKGSYPSFITLGSD-N-ALWFTENQNN---AIGRITESGDI-----------------------------T-EFKIPT- 180 (299)
T ss_dssp -STTCCEEEEEECTT-S-CEEEEETTTT---EEEEECTTCCE-----------------------------E-EEECSS-
T ss_pred -CCCCCCceEEEcCC-C-CEEEEeCCCC---EEEEEcCCCcE-----------------------------E-EeeCCC-
Confidence 12457889999986 4 5999886543 33333221000 0 000000
Q ss_pred ccCCCCCCccccceeeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccccccCCcCCCCC
Q 006811 470 EVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGNDLPSL 549 (630)
Q Consensus 470 ~~~~~~gs~S~tGg~vYrG~~fP~l~G~ylfgD~~sg~lw~~~~~p~~sG~~~~~~i~f~c~~~~p~~c~~~~g~~~~~~ 549 (630)
+...+.++.+- | .|.+++++...+.|+.+.. .|.+. .+.+ + ...
T Consensus 181 ------~~~~~~~i~~~-----~--~g~l~v~~~~~~~i~~~~~----~g~~~--~~~~-------------~----~~~ 224 (299)
T 2z2n_A 181 ------PASGPVGITKG-----N--DDALWFVEIIGNKIGRITT----SGEIT--EFKI-------------P----TPN 224 (299)
T ss_dssp ------TTCCEEEEEEC-----T--TSSEEEEETTTTEEEEECT----TCCEE--EEEC-------------S----STT
T ss_pred ------CCCcceeEEEC-----C--CCCEEEEccCCceEEEECC----CCcEE--EEEC-------------C----CCC
Confidence 11234444442 2 3678888877777777653 34432 1211 0 013
Q ss_pred CccceEEEcCCCcEEEEe--CCeEEEEec
Q 006811 550 GYIYSFGEDNRKDIFILT--SDGVYRVVR 576 (630)
Q Consensus 550 gri~sf~ed~dGeLYvlt--s~gIyRiv~ 576 (630)
.+|.++.+|++|.||+.+ +++|+++..
T Consensus 225 ~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 225 ARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CCceeEEECCCCCEEEeccCCceEEEECC
Confidence 468899999999999997 357998875
No 15
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.22 E-value=7.3e-05 Score=78.20 Aligned_cols=169 Identities=15% Similarity=0.129 Sum_probs=109.0
Q ss_pred CCCcEEEEEeeCce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeee
Q 006811 137 PQGLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMA 213 (630)
Q Consensus 137 p~G~~le~va~Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiA 213 (630)
+.|-..+.++.++. .+|++.+++. +||+++. .++|++++. + ++.. ..+...+....-|||
T Consensus 60 ~~g~~~~~~~~~~~~~~~l~~d~~~~-~ly~~D~~~~~I~r~~~-~-g~~~--------------~~~~~~~~~~p~gla 122 (349)
T 3v64_C 60 PHRSEYTLLLNNLENAIALDFHHRRE-LVFWSDVTLDRILRANL-N-GSNV--------------EEVVSTGLESPGGLA 122 (349)
T ss_dssp TTSCCEEEEECSCSCEEEEEEETTTT-EEEEEETTTTEEEEEET-T-SCSC--------------EEEECSSCSCCCEEE
T ss_pred CCCCeeEEeecCCCceEEEEEecccc-EEEEEeccCCceEEEec-C-CCCc--------------eEEEeCCCCCccEEE
Confidence 34555677777776 8889987543 8999996 688998863 3 3211 112223334568999
Q ss_pred eCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCc
Q 006811 214 FHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEV 293 (630)
Q Consensus 214 fhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~ 293 (630)
+|| .++.+|+.-... .+|.++..++. ..
T Consensus 123 vd~---~~g~ly~~d~~~------------------------------------~~I~~~~~dG~-------------~~ 150 (349)
T 3v64_C 123 VDW---VHDKLYWTDSGT------------------------------------SRIEVANLDGA-------------HR 150 (349)
T ss_dssp EET---TTTEEEEEETTT------------------------------------TEEEEEETTSC-------------SC
T ss_pred Eec---CCCeEEEEcCCC------------------------------------CeEEEEcCCCC-------------ce
Confidence 986 478898754310 26766665432 22
Q ss_pred EEEEEeccCCCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCC
Q 006811 294 RRIFTMGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIP 373 (630)
Q Consensus 294 ~~Il~~~~P~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP 373 (630)
++++.. ....-..|+++|.+|+||++--. ..++|.|++.||..
T Consensus 151 ~~l~~~----~l~~P~~iavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~----------------- 193 (349)
T 3v64_C 151 KVLLWQ----SLEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGSG----------------- 193 (349)
T ss_dssp EEEECT----TCSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCS-----------------
T ss_pred EEEEeC----CCCCcceEEEecCcCeEEEeccC----------------CCCEEEEEeCCCCC-----------------
Confidence 333321 12334579999867999998421 04789999999830
Q ss_pred CCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeeEEEeccCCCceeEE
Q 006811 374 KDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 423 (630)
Q Consensus 374 ~DNPF~~~~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn 423 (630)
+..+...++..|.++++|+..+ +||++|.+.+..+.++
T Consensus 194 -----------~~~~~~~~~~~PnGla~d~~~~-~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 194 -----------RRIIADTHLFWPNGLTIDYAGR-RMYWVDAKHHVIERAN 231 (349)
T ss_dssp -----------CEESCCSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEE
T ss_pred -----------cEEEEECCCCCcceEEEeCCCC-EEEEEECCCCEEEEEe
Confidence 1123345789999999998776 7999999886555554
No 16
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.21 E-value=0.0013 Score=63.87 Aligned_cols=234 Identities=15% Similarity=0.165 Sum_probs=133.7
Q ss_pred eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..|++.+|| ++||+.. .|.|++++ ++ +. ...+ .+ ........+|+++| +|++|+.-.
T Consensus 60 ~~i~~~~~g--~l~v~~~~~~~i~~~~-~~-g~--~~~~-------~~-----~~~~~~~~~i~~~~----~g~l~v~~~ 117 (299)
T 2z2n_A 60 MCLTISSDG--EVWFTENAANKIGRIT-KK-GI--IKEY-------TL-----PNPDSAPYGITEGP----NGDIWFTEM 117 (299)
T ss_dssp EEEEECTTS--CEEEEETTTTEEEEEC-TT-SC--EEEE-------EC-----SSTTCCEEEEEECT----TSCEEEEET
T ss_pred eeEEECCCC--CEEEeCCCCCeEEEEC-CC-Cc--EEEE-------eC-----CCcCCCceeeEECC----CCCEEEEec
Confidence 678889998 6999987 68898875 32 22 1110 01 01234678999996 578888532
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCCCCccce
Q 006811 230 CDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGG 309 (630)
Q Consensus 230 ~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~~~H~GG 309 (630)
.. ..|.++..++ +.+.+ ..+...+...
T Consensus 118 ~~------------------------------------~~i~~~d~~g--------------~~~~~---~~~~~~~~~~ 144 (299)
T 2z2n_A 118 NG------------------------------------NRIGRITDDG--------------KIREY---ELPNKGSYPS 144 (299)
T ss_dssp TT------------------------------------TEEEEECTTC--------------CEEEE---ECSSTTCCEE
T ss_pred CC------------------------------------ceEEEECCCC--------------CEEEe---cCCCCCCCCc
Confidence 10 1555554311 11221 1233334456
Q ss_pred eeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCeEE
Q 006811 310 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 389 (630)
Q Consensus 310 ~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI~ 389 (630)
.|.+++ ||.||++.-. .++|.|+|.++.. ..+.+
T Consensus 145 ~i~~~~-~g~l~v~~~~-----------------~~~i~~~~~~g~~-----------~~~~~----------------- 178 (299)
T 2z2n_A 145 FITLGS-DNALWFTENQ-----------------NNAIGRITESGDI-----------TEFKI----------------- 178 (299)
T ss_dssp EEEECT-TSCEEEEETT-----------------TTEEEEECTTCCE-----------EEEEC-----------------
T ss_pred eEEEcC-CCCEEEEeCC-----------------CCEEEEEcCCCcE-----------EEeeC-----------------
Confidence 799999 9999997532 2458888875420 00111
Q ss_pred EeccccceeeeecCCCCCeeEEEeccCCCceeEEEeccCCCCCcccccCCCcCCCCCCCCCCCCCCCCCCCCceeeccCC
Q 006811 390 ALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLETPGGITPLNSVSPIFPVLGYNHS 469 (630)
Q Consensus 390 A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn~I~~G~NYGWp~~eG~~~~~p~~~p~~~~~~~~~~~i~Pi~~y~H~ 469 (630)
..++..|.++++|+. + +||+++.+.+ .|.++.+.+. +. .+..+
T Consensus 179 ~~~~~~~~~i~~~~~-g-~l~v~~~~~~---~i~~~~~~g~--~~----------------------------~~~~~-- 221 (299)
T 2z2n_A 179 PTPASGPVGITKGND-D-ALWFVEIIGN---KIGRITTSGE--IT----------------------------EFKIP-- 221 (299)
T ss_dssp SSTTCCEEEEEECTT-S-SEEEEETTTT---EEEEECTTCC--EE----------------------------EEECS--
T ss_pred CCCCCcceeEEECCC-C-CEEEEccCCc---eEEEECCCCc--EE----------------------------EEECC--
Confidence 124567889999987 4 5999987654 3444332100 00 00000
Q ss_pred ccCCCCCCccccceeeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccccccCCcCCCCC
Q 006811 470 EVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGNDLPSL 549 (630)
Q Consensus 470 ~~~~~~gs~S~tGg~vYrG~~fP~l~G~ylfgD~~sg~lw~~~~~p~~sG~~~~~~i~f~c~~~~p~~c~~~~g~~~~~~ 549 (630)
.+...+.++.+- | .|.+++++...+.|+.+.. .|.+. .+.+ ++ ..
T Consensus 222 -----~~~~~~~~i~~~-----~--~g~l~v~~~~~~~i~~~d~----~g~~~--~~~~-------------~~----~~ 266 (299)
T 2z2n_A 222 -----TPNARPHAITAG-----A--GIDLWFTEWGANKIGRLTS----NNIIE--EYPI-------------QI----KS 266 (299)
T ss_dssp -----STTCCEEEEEEC-----S--TTCEEEEETTTTEEEEEET----TTEEE--EEEC-------------SS----SS
T ss_pred -----CCCCCceeEEEC-----C--CCCEEEeccCCceEEEECC----CCceE--EEeC-------------CC----CC
Confidence 011345555442 2 3678888887788888763 24322 2211 10 12
Q ss_pred CccceEEEcCCCcEEEEe-CCeEEEEecCC
Q 006811 550 GYIYSFGEDNRKDIFILT-SDGVYRVVRPS 578 (630)
Q Consensus 550 gri~sf~ed~dGeLYvlt-s~gIyRiv~ps 578 (630)
..|.++.+ ++|.||+.+ .++|+|+.+.+
T Consensus 267 ~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~ 295 (299)
T 2z2n_A 267 AEPHGICF-DGETIWFAMECDKIGKLTLIK 295 (299)
T ss_dssp CCEEEEEE-CSSCEEEEETTTEEEEEEEC-
T ss_pred CccceEEe-cCCCEEEEecCCcEEEEEcCc
Confidence 46888999 999999997 47899987654
No 17
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.20 E-value=0.00082 Score=72.64 Aligned_cols=278 Identities=12% Similarity=0.087 Sum_probs=143.8
Q ss_pred eeEEEcCC-CCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPD-GSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pD-Gs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..|++.|| ..++|||++..++|++++ ++++. ... .........+||++| +|.+||.-.
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~~~I~~id-~~~g~--v~~--------------~~~~~~~P~giavd~----dG~lyVad~ 200 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQRDAFRHVD-FVNQY--VDI--------------KTTNIGQCADVNFTL----NGDMVVVDD 200 (433)
T ss_dssp CEEEECTTTTTCEEEEECBTSCEEEEE-TTTTE--EEE--------------ECCCCSCEEEEEECT----TCCEEEEEC
T ss_pred ceEEEccccCCCEEEEEeCCCCEEEEE-CCCCE--EEE--------------eecCCCCccEEEECC----CCCEEEEcC
Confidence 68899986 333899999888999886 33332 111 112334578999997 566887643
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCCCCccce
Q 006811 230 CDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGG 309 (630)
Q Consensus 230 ~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~~~H~GG 309 (630)
.... ....|..+..... ... ...+. . ..+-.
T Consensus 201 ~~~~--------------------------------~~~gv~~~~~~~~-----------~~~-~~~~~----~-~~~P~ 231 (433)
T 4hw6_A 201 QSSD--------------------------------TNTGIYLFTRASG-----------FTE-RLSLC----N-ARGAK 231 (433)
T ss_dssp CSCT--------------------------------TSEEEEEECGGGT-----------TCC-EEEEE----E-CSSBC
T ss_pred CCCc--------------------------------ccceEEEEECCCC-----------eec-ccccc----c-cCCCC
Confidence 2100 0123333332111 111 12221 1 12223
Q ss_pred eeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCeEE
Q 006811 310 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 389 (630)
Q Consensus 310 ~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI~ 389 (630)
.|+++|.+|.|||+.-. .+.|+||+.++. .+ ...++
T Consensus 232 giavd~~~G~lyv~d~~-----------------~~~V~~~d~~~g---------------~~------------~~~~~ 267 (433)
T 4hw6_A 232 TCAVHPQNGKIYYTRYH-----------------HAMISSYDPATG---------------TL------------TEEEV 267 (433)
T ss_dssp CCEECTTTCCEEECBTT-----------------CSEEEEECTTTC---------------CE------------EEEEE
T ss_pred EEEEeCCCCeEEEEECC-----------------CCEEEEEECCCC---------------eE------------EEEEe
Confidence 48899878999997432 356999998731 00 00122
Q ss_pred Eecc-ccceeeeecCCCCCeeEEEeccCCCceeEEEeccCCCCCcccc-cCCCcCCCCCCCCCCCCCCCCCCCCceeecc
Q 006811 390 ALGL-RNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLY-EGPYLFTPLETPGGITPLNSVSPIFPVLGYN 467 (630)
Q Consensus 390 A~Gl-RNP~r~afD~~~g~~l~~~DvG~d~~EEIn~I~~G~NYGWp~~-eG~~~~~p~~~p~~~~~~~~~~~i~Pi~~y~ 467 (630)
..|- ..+.+++||+... +||++|.+.+..-.++.=...+.++.+.. .|... . .+.. ++ ..-...+
T Consensus 268 ~~~~~~~~~~ia~dpdG~-~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g-~-----~g~~--dg---~~~~a~~- 334 (433)
T 4hw6_A 268 MMDTKGSNFHIVWHPTGD-WAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHS-S-----PGWV--DG---MGTGARL- 334 (433)
T ss_dssp ECSCCSSCEEEEECTTSS-EEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTT-C-----CCCB--CE---EGGGSBC-
T ss_pred ccCCCCCcccEEEeCCCC-EEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCC-C-----CccC--CC---cccceEE-
Confidence 2221 2345699999854 69999998865444332112222222211 11000 0 0000 00 0000001
Q ss_pred CCccCCCCCCccccceeeecCCCC-C-cccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccc--cccCC
Q 006811 468 HSEVNKKEGSASITGGYFYRSMTD-P-CMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQC--KVLPG 543 (630)
Q Consensus 468 H~~~~~~~gs~S~tGg~vYrG~~f-P-~l~G~ylfgD~~sg~lw~~~~~p~~sG~~~~~~i~f~c~~~~p~~c--~~~~g 543 (630)
..|.|+.|..-.++ + .-.|.++++|..+++|+.+. | .|.. ..+ . +.. ..| -+..|
T Consensus 335 ----------~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~--~--~G~v--~t~--~--G~g-~~~~~G~~dG 393 (433)
T 4hw6_A 335 ----------WGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT--P--EGRV--TTY--A--GRG-NSREWGYVDG 393 (433)
T ss_dssp ----------SSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC--T--TSEE--EEE--E--CCC-TTCSSCCBCE
T ss_pred ----------cCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC--C--CCCE--EEE--E--eCC-CCCccccCCC
Confidence 24667777221110 0 23578999999999998875 3 3522 222 1 111 111 11122
Q ss_pred -cC-CCCCCccceEEEc-CCCcEEEEeC--CeEEEEec
Q 006811 544 -ND-LPSLGYIYSFGED-NRKDIFILTS--DGVYRVVR 576 (630)
Q Consensus 544 -~~-~~~~gri~sf~ed-~dGeLYvlts--~gIyRiv~ 576 (630)
.. ...+.+|.+++.| ++|.|||++. +.|.||..
T Consensus 394 ~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 394 ELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp ETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred ccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 11 1236689999999 8999999996 46888764
No 18
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.18 E-value=4.5e-05 Score=80.91 Aligned_cols=168 Identities=14% Similarity=0.116 Sum_probs=107.5
Q ss_pred CCcEEEEEeeCce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeee
Q 006811 138 QGLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAF 214 (630)
Q Consensus 138 ~G~~le~va~Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAf 214 (630)
.+-.++.++.++. .+|++.+++. +||+++. .++|++++. + |+. . ..+...+.....|||+
T Consensus 104 ~~~~~~~~~~~~~~~~gl~~d~~~~-~ly~~D~~~~~I~r~~~-~-g~~--~------------~~~~~~~~~~p~glav 166 (386)
T 3v65_B 104 HRSEYTLLLNNLENAIALDFHHRRE-LVFWSDVTLDRILRANL-N-GSN--V------------EEVVSTGLESPGGLAV 166 (386)
T ss_dssp TSCCCEEEECSCSCEEEEEEETTTT-EEEEEETTTTEEEEEET-T-SCC--E------------EEEECSSCSCCCCEEE
T ss_pred CCCcEEEEecCCCccEEEEEecCCC-eEEEEeCCCCcEEEEec-C-CCC--c------------EEEEeCCCCCccEEEE
Confidence 3434566777776 8899987543 8999996 688998863 2 321 1 0122233445689999
Q ss_pred CCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcE
Q 006811 215 HPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVR 294 (630)
Q Consensus 215 hPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~ 294 (630)
+| .++.||+.-... .+|.++..++. ..+
T Consensus 167 d~---~~g~lY~~d~~~------------------------------------~~I~~~~~dg~-------------~~~ 194 (386)
T 3v65_B 167 DW---VHDKLYWTDSGT------------------------------------SRIEVANLDGA-------------HRK 194 (386)
T ss_dssp ET---TTTEEEEEETTT------------------------------------TEEEECBTTSC-------------SCE
T ss_pred Ee---CCCeEEEEcCCC------------------------------------CeEEEEeCCCC-------------ceE
Confidence 97 478898854311 15655543321 223
Q ss_pred EEEEeccCCCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCC
Q 006811 295 RIFTMGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPK 374 (630)
Q Consensus 295 ~Il~~~~P~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~ 374 (630)
+++.. ....-..|+++|.+|+||++--. ..++|.|++.||.
T Consensus 195 ~l~~~----~l~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~------------------- 235 (386)
T 3v65_B 195 VLLWQ----SLEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGS------------------- 235 (386)
T ss_dssp EEECS----SCSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSC-------------------
T ss_pred EeecC----CCCCCcEEEEEcCCCeEEEeccC----------------CCCEEEEEeCCCC-------------------
Confidence 33321 12334579999867899998321 1478999999983
Q ss_pred CCCCCCCCCCCCeEEEeccccceeeeecCCCCCeeEEEeccCCCceeEE
Q 006811 375 DNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 423 (630)
Q Consensus 375 DNPF~~~~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn 423 (630)
.+..+...++..|.+++||+..+ +||++|.+.+..+.++
T Consensus 236 ---------~~~~~~~~~~~~PnGlavd~~~~-~lY~aD~~~~~I~~~d 274 (386)
T 3v65_B 236 ---------GRRIIADTHLFWPNGLTIDYAGR-RMYWVDAKHHVIERAN 274 (386)
T ss_dssp ---------SCEEEECSSCSCEEEEEEEGGGT-EEEEEETTTTEEEEEC
T ss_pred ---------CcEEEEECCCCCeeeEEEeCCCC-EEEEEECCCCEEEEEe
Confidence 12345567899999999998766 7999998876444433
No 19
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.18 E-value=0.00049 Score=66.54 Aligned_cols=232 Identities=13% Similarity=0.173 Sum_probs=128.7
Q ss_pred eeEEEcCCCCceEEE-Ee-cCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 006811 151 LNMVAHPDGSNRAFF-SN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 228 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV-~e-q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsY 228 (630)
..|++.+|| ++|| ++ ..|.|++++ ++ ... .. ...........+|+++| +|.+||.-
T Consensus 27 ~~i~~~~~g--~l~v~~~~~~~~i~~~~-~~--~~~-~~------------~~~~~~~~~p~~i~~~~----~g~l~v~~ 84 (270)
T 1rwi_B 27 SGVAVDSAG--NVYVTSEGMYGRVVKLA-TG--STG-TT------------VLPFNGLYQPQGLAVDG----AGTVYVTD 84 (270)
T ss_dssp EEEEECTTC--CEEEEECSSSCEEEEEC-C--------E------------ECCCCSCCSCCCEEECT----TCCEEEEE
T ss_pred cceEECCCC--CEEEEccCCCCcEEEec-CC--Ccc-cc------------eEeeCCcCCcceeEECC----CCCEEEEc
Confidence 678999999 6999 85 468898875 22 111 10 00012234578899997 57788864
Q ss_pred eecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCCCCccc
Q 006811 229 NCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHG 308 (630)
Q Consensus 229 s~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~~~H~G 308 (630)
. . .+|.+|..++. ..+. + ... ....-
T Consensus 85 ~-~------------------------------------~~i~~~d~~~~-------------~~~~-~--~~~-~~~~p 110 (270)
T 1rwi_B 85 F-N------------------------------------NRVVTLAAGSN-------------NQTV-L--PFD-GLNYP 110 (270)
T ss_dssp T-T------------------------------------TEEEEECTTCS-------------CCEE-C--CCC-SCSSE
T ss_pred C-C------------------------------------CEEEEEeCCCc-------------eEee-e--ecC-CcCCC
Confidence 3 1 15666643221 1111 1 111 11234
Q ss_pred eeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCeE
Q 006811 309 GQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEI 388 (630)
Q Consensus 309 G~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI 388 (630)
..|.|++ ||.|||+... .++|.+++.... . ....
T Consensus 111 ~~i~~~~-~g~l~v~~~~-----------------~~~i~~~~~~~~---------------~-------------~~~~ 144 (270)
T 1rwi_B 111 EGLAVDT-QGAVYVADRG-----------------NNRVVKLAAGSK---------------T-------------QTVL 144 (270)
T ss_dssp EEEEECT-TCCEEEEEGG-----------------GTEEEEECTTCC---------------S-------------CEEC
T ss_pred cceEECC-CCCEEEEECC-----------------CCEEEEEECCCc---------------e-------------eEee
Confidence 5799999 9999998542 346888854331 0 0000
Q ss_pred EEeccccceeeeecCCCCCeeEEEeccCCCceeEEEeccCCCCCcccccCCCcCCCCCCCCCCCCCCCCCCCCceeeccC
Q 006811 389 WALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRLYEGPYLFTPLETPGGITPLNSVSPIFPVLGYNH 468 (630)
Q Consensus 389 ~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn~I~~G~NYGWp~~eG~~~~~p~~~p~~~~~~~~~~~i~Pi~~y~H 468 (630)
...++.+|.++++|+. + +||++|.+.+ .|.++...+..-+ .....
T Consensus 145 ~~~~~~~p~~i~~~~~-g-~l~v~~~~~~---~i~~~~~~~~~~~-----------------------------~~~~~- 189 (270)
T 1rwi_B 145 PFTGLNDPDGVAVDNS-G-NVYVTDTDNN---RVVKLEAESNNQV-----------------------------VLPFT- 189 (270)
T ss_dssp CCCSCCSCCCEEECTT-C-CEEEEEGGGT---EEEEECTTTCCEE-----------------------------ECCCS-
T ss_pred ccccCCCceeEEEeCC-C-CEEEEECCCC---EEEEEecCCCceE-----------------------------eeccc-
Confidence 1235678999999995 4 5999997653 3444432211000 00000
Q ss_pred CccCCCCCCccccceeeecCCCCCcccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccccccCCcCCCC
Q 006811 469 SEVNKKEGSASITGGYFYRSMTDPCMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGNDLPS 548 (630)
Q Consensus 469 ~~~~~~~gs~S~tGg~vYrG~~fP~l~G~ylfgD~~sg~lw~~~~~p~~sG~~~~~~i~f~c~~~~p~~c~~~~g~~~~~ 548 (630)
+...+.++.+- | .|.+++++...++|+.+.. + +.... .+. ...
T Consensus 190 -------~~~~p~~i~~d-----~--~g~l~v~~~~~~~v~~~~~--~--~~~~~-~~~------------------~~~ 232 (270)
T 1rwi_B 190 -------DITAPWGIAVD-----E--AGTVYVTEHNTNQVVKLLA--G--STTST-VLP------------------FTG 232 (270)
T ss_dssp -------SCCSEEEEEEC-----T--TCCEEEEETTTSCEEEECT--T--CSCCE-ECC------------------CCS
T ss_pred -------CCCCceEEEEC-----C--CCCEEEEECCCCcEEEEcC--C--CCcce-eec------------------cCC
Confidence 00234454442 1 4678888887778777653 2 22110 000 011
Q ss_pred CCccceEEEcCCCcEEEEeC--CeEEEEec
Q 006811 549 LGYIYSFGEDNRKDIFILTS--DGVYRVVR 576 (630)
Q Consensus 549 ~gri~sf~ed~dGeLYvlts--~gIyRiv~ 576 (630)
...+.++.+|++|.||+.+. +.|+++..
T Consensus 233 ~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 233 LNTPLAVAVDSDRTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp CSCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred CCCceeEEECCCCCEEEEECCCCEEEEEcC
Confidence 34688999999999999985 45666553
No 20
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.15 E-value=0.00035 Score=74.61 Aligned_cols=180 Identities=13% Similarity=0.091 Sum_probs=96.7
Q ss_pred CCCcEEEEEeeCce-eeEEEcCCCCceEEEEecCc--eEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeee
Q 006811 137 PQGLCLEKIGNGSY-LNMVAHPDGSNRAFFSNQEG--KIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMA 213 (630)
Q Consensus 137 p~G~~le~va~Gl~-~~ma~~pDGs~RlfV~eq~G--~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiA 213 (630)
+++-.++.+..+.. ..+++.|||. +||+++..| +|++++. +.+. .+.. + ..+......+..++|
T Consensus 159 ~~~g~~~~~~~~~~~~~ia~~~~g~-~l~~~d~~~~~~I~~~d~-~~~~--~~~~------~---g~~~~~~~~~p~~ia 225 (409)
T 3hrp_A 159 VDDNKVTTVHPGFKGGKPAVTKDKQ-RVYSIGWEGTHTVYVYMK-ASGW--APTR------I---GQLGSTFSGKIGAVA 225 (409)
T ss_dssp TTTTEEEEEEETCCBCBCEECTTSS-EEEEEBSSTTCEEEEEEG-GGTT--CEEE------E---EECCTTSCSCCCBCE
T ss_pred CCCCEEEEeeccCCCCceeEecCCC-cEEEEecCCCceEEEEEc-CCCc--eeEE------e---eeccchhcCCcEEEE
Confidence 34334455554433 2289999985 799999865 8998863 2211 1100 0 001111345678999
Q ss_pred eCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCc
Q 006811 214 FHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEV 293 (630)
Q Consensus 214 fhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~ 293 (630)
+||+ +|+||+... . .+|.+|..+.. .
T Consensus 226 v~p~---~g~lyv~d~---~----------------------------------~~I~~~d~~~~-------------~- 251 (409)
T 3hrp_A 226 LDET---EEWLYFVDS---N----------------------------------KNFGRFNVKTQ-------------E- 251 (409)
T ss_dssp ECTT---SSEEEEECT---T----------------------------------CEEEEEETTTC-------------C-
T ss_pred EeCC---CCeEEEEEC---C----------------------------------CcEEEEECCCC-------------C-
Confidence 9984 899998321 0 26777765321 1
Q ss_pred EEEEE-eccCCCCccc-e-eeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCc
Q 006811 294 RRIFT-MGLSFNGHHG-G-QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSY 370 (630)
Q Consensus 294 ~~Il~-~~~P~~~H~G-G-~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~Y 370 (630)
..++. .+........ . .|.|+|.+|.|||+--. .++|+|++.|+.-. ..
T Consensus 252 ~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~-----------------~~~I~~~~~~g~~~-----~~------ 303 (409)
T 3hrp_A 252 VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN-----------------LSSVYKITPDGECE-----WF------ 303 (409)
T ss_dssp EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT-----------------TTEEEEECTTCCEE-----EE------
T ss_pred EEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC-----------------CCEEEEEecCCCEE-----EE------
Confidence 22321 1111111111 2 79999955999998322 34699998887300 00
Q ss_pred cCCCCCCCCCCCCCCCe-EEEeccccceeeeecCCCCCeeEEEec-cCCC
Q 006811 371 SIPKDNPFSEDSGLQPE-IWALGLRNPWRCSFDSDRPSYFMCADV-GQDV 418 (630)
Q Consensus 371 sIP~DNPF~~~~~~~pE-I~A~GlRNP~r~afD~~~g~~l~~~Dv-G~d~ 418 (630)
...+. ..+.... .-..-|..|.++++|+. | +||++|. +.+.
T Consensus 304 ---~g~~~--~~g~~dg~~~~~~~~~P~gia~d~d-G-~lyvad~~~~~~ 346 (409)
T 3hrp_A 304 ---CGSAT--QKTVQDGLREEALFAQPNGMTVDED-G-NFYIVDGFKGYC 346 (409)
T ss_dssp ---EECTT--CCSCBCEEGGGCBCSSEEEEEECTT-C-CEEEEETTTTCE
T ss_pred ---EeCCC--CCCcCCCcccccEeCCCeEEEEeCC-C-CEEEEeCCCCCE
Confidence 00000 0000000 00012678999999997 4 4999998 7654
No 21
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.09 E-value=0.00017 Score=77.01 Aligned_cols=167 Identities=13% Similarity=0.149 Sum_probs=105.7
Q ss_pred EEEeeCce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCC
Q 006811 143 EKIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFA 219 (630)
Q Consensus 143 e~va~Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~ 219 (630)
+.++.++. .+|++.+++. +||+++. .++|+.+.+ + +... .... ..+...+....-|||+|+
T Consensus 105 ~~~~~~~~~~~~l~~d~~~~-~lywsD~~~~~I~~~~~-~-g~~~---------~~~~-~~~~~~~~~~p~glavD~--- 168 (400)
T 3p5b_L 105 TSLIPNLRNVVALDTEVASN-RIYWSDLSQRMICSTQL-D-RAHG---------VSSY-DTVISRDIQAPDGLAVDW--- 168 (400)
T ss_dssp EEEECSCSCEEEEEEETTTT-EEEEEETTTTEEEEEEC-----------------CCC-EEEECSSCSCEEEEEEET---
T ss_pred eEeccccCcceEEeeeeccC-ceEEEecCCCeEEEEEc-c-cCCC---------CCcc-eEEEeCCCCCcccEEEEe---
Confidence 44566665 8899998653 8999996 688988763 2 2110 0000 122233456778999996
Q ss_pred CCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEe
Q 006811 220 KNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTM 299 (630)
Q Consensus 220 ~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~ 299 (630)
.++.||+.-... .+|.++..++. ..++++..
T Consensus 169 ~~~~lY~~d~~~------------------------------------~~I~~~~~~g~-------------~~~~l~~~ 199 (400)
T 3p5b_L 169 IHSNIYWTDSVL------------------------------------GTVSVADTKGV-------------KRKTLFRE 199 (400)
T ss_dssp TTTEEEEEETTT------------------------------------TEEEEECTTTC-------------SEEEEEEC
T ss_pred cCCceEEEECCC------------------------------------CeEEEEeCCCC-------------ceEEEEeC
Confidence 478898864311 15655544321 23344432
Q ss_pred ccCCCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCC
Q 006811 300 GLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFS 379 (630)
Q Consensus 300 ~~P~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~ 379 (630)
+ ...--.|+++|.+|+||++--. ..++|.|++.||.
T Consensus 200 ~----~~~P~~iavdp~~g~ly~td~~----------------~~~~I~~~~~dG~------------------------ 235 (400)
T 3p5b_L 200 N----GSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGV------------------------ 235 (400)
T ss_dssp S----SCCEEEEEEETTTTEEEEEECS----------------SSCCEEEEETTSC------------------------
T ss_pred C----CCCcceEEEecccCeEEEEeCC----------------CCCEEEEEeCCCC------------------------
Confidence 1 2334579999877999998521 0257999999983
Q ss_pred CCCCCCCeEEEeccccceeeeecCCCCCeeEEEeccCCCceeEE
Q 006811 380 EDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 423 (630)
Q Consensus 380 ~~~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn 423 (630)
.+..+..-++..|.++++|+..+ +||++|.+.+..+.++
T Consensus 236 ----~~~~~~~~~l~~P~glavd~~~~-~lY~aD~~~~~I~~~d 274 (400)
T 3p5b_L 236 ----DIYSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSID 274 (400)
T ss_dssp ----SCEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEE
T ss_pred ----ccEEEEECCCCceEEEEEEeCCC-EEEEEECCCCEEEEEe
Confidence 12245566889999999999876 7999999876655555
No 22
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.08 E-value=0.00016 Score=74.98 Aligned_cols=164 Identities=13% Similarity=0.124 Sum_probs=104.6
Q ss_pred EEEeeCce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCC
Q 006811 143 EKIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFA 219 (630)
Q Consensus 143 e~va~Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~ 219 (630)
+.+..++. ++|++.+.+. +||+++. .++|+++.. + ++.. ...+...+....-|||+++
T Consensus 28 ~~~~~~~~~~~~ld~d~~~~-~lyw~D~~~~~I~r~~~-~-g~~~-------------~~~~~~~~l~~p~glavd~--- 88 (318)
T 3sov_A 28 TIVVGGLEDAAAVDFVFSHG-LIYWSDVSEEAIKRTEF-N-KTES-------------VQNVVVSGLLSPDGLACDW--- 88 (318)
T ss_dssp EEEEEEEEEEEEEEEEGGGT-EEEEEETTTTEEEEEET-T-SSSC-------------CCEEEEECCSCCCEEEEET---
T ss_pred EEEecCCCccEEEEEEeCCC-EEEEEECCCCcEEEEEc-c-CCCc-------------eEEEEcCCCCCccEEEEEc---
Confidence 44555665 7889988543 8999996 578988863 2 3210 0112223345678999986
Q ss_pred CCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEe
Q 006811 220 KNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTM 299 (630)
Q Consensus 220 ~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~ 299 (630)
.++.+|+.-... .+|.++..++. ..++++..
T Consensus 89 ~~g~ly~~d~~~------------------------------------~~I~~~~~dG~-------------~~~~l~~~ 119 (318)
T 3sov_A 89 LGEKLYWTDSET------------------------------------NRIEVSNLDGS-------------LRKVLFWQ 119 (318)
T ss_dssp TTTEEEEEETTT------------------------------------TEEEEEETTSC-------------SCEEEECS
T ss_pred CCCeEEEEECCC------------------------------------CEEEEEECCCC-------------cEEEEEeC
Confidence 478898853210 26666665332 22333321
Q ss_pred ccCCCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCC
Q 006811 300 GLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFS 379 (630)
Q Consensus 300 ~~P~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~ 379 (630)
....-..|+++|..|+||++--. ..++|.|++.||.
T Consensus 120 ----~~~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~------------------------ 155 (318)
T 3sov_A 120 ----ELDQPRAIALDPSSGFMYWTDWG----------------EVPKIERAGMDGS------------------------ 155 (318)
T ss_dssp ----SCSSEEEEEEEGGGTEEEEEECS----------------SSCEEEEEETTSC------------------------
T ss_pred ----CCCCccEEEEeCCCCEEEEEecC----------------CCCEEEEEEcCCC------------------------
Confidence 12233569999856999998411 1367999999983
Q ss_pred CCCCCCCeEEEeccccceeeeecCCCCCeeEEEeccCCCceeEE
Q 006811 380 EDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 423 (630)
Q Consensus 380 ~~~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn 423 (630)
.+..+..-++..|.++++|+..+ +||.+|.+.+..+.++
T Consensus 156 ----~~~~~~~~~l~~Pnglavd~~~~-~lY~aD~~~~~I~~~d 194 (318)
T 3sov_A 156 ----SRFIIINSEIYWPNGLTLDYEEQ-KLYWADAKLNFIHKSN 194 (318)
T ss_dssp ----SCEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEE
T ss_pred ----CeEEEEECCCCCccEEEEeccCC-EEEEEECCCCEEEEEc
Confidence 12234456899999999999766 7999998876555444
No 23
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.04 E-value=0.0021 Score=69.24 Aligned_cols=280 Identities=11% Similarity=0.083 Sum_probs=142.7
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEee
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFNC 230 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs~ 230 (630)
..|++.|+..++|||+++.++|++++. +.+ .+. ..........+|||+|+ .+++||+-..
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~-~~~---~v~-------------~~~~~~~~P~~ia~d~~---G~~lyvad~~ 199 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDF-EKE---YVS-------------TVYSGLSKVRTICWTHE---ADSMIITNDQ 199 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEET-TTT---EEE-------------EEECCCSCEEEEEECTT---SSEEEEEECC
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEEC-CCC---EEE-------------EEecCCCCcceEEEeCC---CCEEEEEeCC
Confidence 678899831138999998888988863 221 111 11123456889999973 3358886542
Q ss_pred cCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCCCCcccee
Q 006811 231 DKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGGQ 310 (630)
Q Consensus 231 ~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~~~H~GG~ 310 (630)
... ...+|..+..++. ....+.+-. .++-..
T Consensus 200 ~~~--------------------------------~~~~v~~~~~~g~-----------~~~~~~l~~------~~~p~g 230 (430)
T 3tc9_A 200 NNN--------------------------------DRPNNYILTRESG-----------FKVITELTK------GQNCNG 230 (430)
T ss_dssp SCT--------------------------------TSEEEEEEEGGGT-----------SCSEEEEEE------CSSCCC
T ss_pred CCc--------------------------------ccceEEEEeCCCc-----------eeeeeeecc------CCCceE
Confidence 110 0124444443221 111122221 223456
Q ss_pred eEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCeEEE
Q 006811 311 LLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIWA 390 (630)
Q Consensus 311 L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI~A 390 (630)
|.+.|.+|+|||+--. .++|+|++.++.. ..+++.
T Consensus 231 iavdp~~g~lyv~d~~-----------------~~~V~~~~~~~~~----------------------------~~~~~~ 265 (430)
T 3tc9_A 231 AETHPINGELYFNSWN-----------------AGQVFRYDFTTQE----------------------------TTPLFT 265 (430)
T ss_dssp EEECTTTCCEEEEETT-----------------TTEEEEEETTTTE----------------------------EEEEEE
T ss_pred EEEeCCCCEEEEEECC-----------------CCEEEEEECCCCc----------------------------EEEEEE
Confidence 8899877999998532 2479999998720 012333
Q ss_pred ec-cccceeeeecCCCCCeeEEEeccCCCceeEEEeccCCCCCccc-ccCCCcCCCCCCCCCCCCCCCCCCCCceeeccC
Q 006811 391 LG-LRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWRL-YEGPYLFTPLETPGGITPLNSVSPIFPVLGYNH 468 (630)
Q Consensus 391 ~G-lRNP~r~afD~~~g~~l~~~DvG~d~~EEIn~I~~G~NYGWp~-~eG~~~~~p~~~p~~~~~~~~~~~i~Pi~~y~H 468 (630)
.+ ...|.+++||+... +||++|.+.+....++.=...+.++.+. ..|.. .. .+.. ++ ....- .+
T Consensus 266 ~~~~~~P~gia~~pdG~-~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~--g~----~g~~--dg-~~~~a--~~-- 331 (430)
T 3tc9_A 266 IQDSGWEFHIQFHPSGN-YAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQ--GA----KDWV--DG-VGKKA--RM-- 331 (430)
T ss_dssp CSSSSCCEEEEECTTSS-EEEEEETTTTEEEEEEEETTTTEECCCEEEEECT--TC----BCCB--CE-EGGGC--BB--
T ss_pred cCCCCcceeEEEcCCCC-EEEEEECCCCEEEEEeCCcccccccceEEEeccC--CC----CCCC--CC-CCcce--Ee--
Confidence 32 24588999999753 6999998876543333211111111111 00000 00 0000 00 00000 01
Q ss_pred CccCCCCCCccccceeeecCCCC-C-cccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccccccCC-cC
Q 006811 469 SEVNKKEGSASITGGYFYRSMTD-P-CMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPG-ND 545 (630)
Q Consensus 469 ~~~~~~~gs~S~tGg~vYrG~~f-P-~l~G~ylfgD~~sg~lw~~~~~p~~sG~~~~~~i~f~c~~~~p~~c~~~~g-~~ 545 (630)
..|.+|.+....++ . .-.|.++++|..+++|..+. | .|... .+ . -.+..... .+..| ..
T Consensus 332 ---------~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~--~--~G~v~--~~-~-g~g~~~~~-G~~dG~~~ 393 (430)
T 3tc9_A 332 ---------HAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT--P--QGRVT--TF-A-GRGSNGTS-GYNDGDLR 393 (430)
T ss_dssp ---------SSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC--T--TSEEE--EE-E-ECCTTSSS-SCBCEETT
T ss_pred ---------CCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC--C--CCcEE--EE-E-eCCCCCCC-cccCCCch
Confidence 24453333221100 0 12478999999999988875 3 35322 22 1 11100000 00011 11
Q ss_pred -CCCCCccceEEEcC-CCcEEEEeC--CeEEEEec
Q 006811 546 -LPSLGYIYSFGEDN-RKDIFILTS--DGVYRVVR 576 (630)
Q Consensus 546 -~~~~gri~sf~ed~-dGeLYvlts--~gIyRiv~ 576 (630)
...+.+|.+|+.|+ +|.|||++. +.|.||..
T Consensus 394 ~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 394 QEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp TTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred hhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 12356899999999 699999986 46888764
No 24
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.03 E-value=0.00017 Score=84.23 Aligned_cols=167 Identities=13% Similarity=0.155 Sum_probs=105.5
Q ss_pred EEEeeCce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCC
Q 006811 143 EKIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFA 219 (630)
Q Consensus 143 e~va~Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~ 219 (630)
+.++.++. .+|++.+.+. +||+++. .++|+++.+. +.... -.. ..+...+.....|||+|+
T Consensus 417 ~~l~~~~~~~~gl~~d~~~~-~lY~sD~~~~~I~~~~l~--g~~~~---------~~~-~~vi~~~l~~P~GLAvD~--- 480 (791)
T 3m0c_C 417 TSLIPNLRNVVALDTEVASN-RIYWSDLSQRMICSTQLD--RAHGV---------SSY-DTVISRDIQAPDGLAVDW--- 480 (791)
T ss_dssp EEEECSCSSEEEEEEETTTT-EEEEEETTTTEEEEEEC-------------------C-EEEECSSCSCCCEEEEET---
T ss_pred eeeecCCCceEEEeecccCC-eeEEeeccceeEEEEecc--CCCCC---------cce-eEEEecCCCCcceeeeee---
Confidence 44555665 7888888543 8999997 5789887642 21100 000 122223456678999997
Q ss_pred CCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEe
Q 006811 220 KNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTM 299 (630)
Q Consensus 220 ~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~ 299 (630)
..+.||++-+.. .+|.++..++. ..++|+..
T Consensus 481 ~~~~LY~tD~~~------------------------------------~~I~v~~ldG~-------------~~~~l~~~ 511 (791)
T 3m0c_C 481 IHSNIYWTDSVL------------------------------------GTVSVADTKGV-------------KRKTLFRE 511 (791)
T ss_dssp TTTEEEEEETTT------------------------------------TEEEEEETTSS-------------SEEEEEEC
T ss_pred cCCcEEEEecCC------------------------------------CeEEEEeCCCC-------------eEEEEEeC
Confidence 367888854310 26766665432 23444432
Q ss_pred ccCCCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCC
Q 006811 300 GLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFS 379 (630)
Q Consensus 300 ~~P~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~ 379 (630)
. ...--.|+++|..|+|||+-- + ..++|.|++.||.
T Consensus 512 ~----l~~P~gIaVDp~~g~LYwtD~--g--------------~~~~I~~~~~dG~------------------------ 547 (791)
T 3m0c_C 512 N----GSKPRAIVVDPVHGFMYWTDW--G--------------TPAKIKKGGLNGV------------------------ 547 (791)
T ss_dssp T----TCCEEEEEEETTTTEEEEEEC--S--------------SSCEEEEEETTSC------------------------
T ss_pred C----CCCcceEEEecCCCCEEEecC--C--------------CCCeEEEEecCCC------------------------
Confidence 2 233457999995699999851 1 0267999999983
Q ss_pred CCCCCCCeEEEeccccceeeeecCCCCCeeEEEeccCCCceeEE
Q 006811 380 EDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 423 (630)
Q Consensus 380 ~~~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn 423 (630)
.+..+..-++..|.++++|+..+ +||++|.+.+..+.++
T Consensus 548 ----~~~~lv~~~l~~P~GLavD~~~~-~LYwaD~~~~~I~~~d 586 (791)
T 3m0c_C 548 ----DIYSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSID 586 (791)
T ss_dssp ----CEEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEE
T ss_pred ----ceEEEEeCCCCCceEEEEecCCC-eEEEEeCCCCcEEEEe
Confidence 12345667899999999998876 7999998876555554
No 25
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.98 E-value=0.00052 Score=70.41 Aligned_cols=164 Identities=13% Similarity=0.156 Sum_probs=101.0
Q ss_pred EEeeCce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCC--CceeeecCCCCCcCCccceeeCCCCceeeeeeCCCC
Q 006811 144 KIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGL--GETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNF 218 (630)
Q Consensus 144 ~va~Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gs--g~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF 218 (630)
.+..++. .++++.+++. ++|+++. .++|++++. + +. +... ..+...+.....|||+++
T Consensus 24 ~~~~~~~~p~g~~~d~~~~-~ly~~D~~~~~I~~~~~-~-g~~~~~~~------------~~~~~~~~~~p~glavd~-- 86 (316)
T 1ijq_A 24 SLIPNLRNVVALDTEVASN-RIYWSDLSQRMICSTQL-D-RAHGVSSY------------DTVISRDIQAPDGLAVDW-- 86 (316)
T ss_dssp EEECSCSSEEEEEEETTTT-EEEEEETTTTEEEEEEC----------C------------EEEECSSCSCCCEEEEET--
T ss_pred ehhcCCCceEEEEEEeCCC-EEEEEECCCCcEEEEEC-C-CCCCCccc------------EEEEeCCCCCcCEEEEee--
Confidence 3444444 7899988653 8999997 589998863 2 21 0000 011112234568999986
Q ss_pred CCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEE
Q 006811 219 AKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFT 298 (630)
Q Consensus 219 ~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~ 298 (630)
.++.+|+.-... .+|.++..++. ..++++.
T Consensus 87 -~~~~ly~~d~~~------------------------------------~~I~~~~~~g~-------------~~~~~~~ 116 (316)
T 1ijq_A 87 -IHSNIYWTDSVL------------------------------------GTVSVADTKGV-------------KRKTLFR 116 (316)
T ss_dssp -TTTEEEEEETTT------------------------------------TEEEEEETTSS-------------SEEEEEE
T ss_pred -cCCeEEEEECCC------------------------------------CEEEEEeCCCC-------------ceEEEEE
Confidence 378898854310 25666654321 2334443
Q ss_pred eccCCCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCC
Q 006811 299 MGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPF 378 (630)
Q Consensus 299 ~~~P~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF 378 (630)
.. ...-..|+++|.+|+||++--. ..++|.|++.||..
T Consensus 117 ~~----~~~P~~iavdp~~g~ly~~d~~----------------~~~~I~~~~~dG~~---------------------- 154 (316)
T 1ijq_A 117 EN----GSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVD---------------------- 154 (316)
T ss_dssp CT----TCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCC----------------------
T ss_pred CC----CCCcceEEeCCCCCEEEEEccC----------------CCCeEEEEcCCCCC----------------------
Confidence 11 2334579999867999997421 03689999999830
Q ss_pred CCCCCCCCeEEEeccccceeeeecCCCCCeeEEEeccCCCceeEE
Q 006811 379 SEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 423 (630)
Q Consensus 379 ~~~~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn 423 (630)
+..+...++..|.++++|+..+ +||++|.+.+..+.++
T Consensus 155 ------~~~~~~~~~~~P~gla~d~~~~-~lY~~D~~~~~I~~~d 192 (316)
T 1ijq_A 155 ------IYSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSID 192 (316)
T ss_dssp ------EEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEE
T ss_pred ------eEEEEECCCCCceEEEEeccCC-EEEEEECCCCeEEEEe
Confidence 1123345788999999999766 7999998876555544
No 26
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.93 E-value=0.00038 Score=79.03 Aligned_cols=149 Identities=14% Similarity=0.133 Sum_probs=99.9
Q ss_pred eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
.+|++.+++. +||+++. .++|+.+.+ +|+... .+...+.....|||+|+ .++.+|+.-.
T Consensus 40 ~~l~~d~~~~-~lywtD~~~~~I~r~~~--~g~~~~--------------~v~~~g~~~P~GlAvD~---~~~~LY~tD~ 99 (628)
T 4a0p_A 40 SALDFDVTDN-RIYWTDISLKTISRAFM--NGSALE--------------HVVEFGLDYPEGMAVDW---LGKNLYWADT 99 (628)
T ss_dssp EEEEEETTTT-EEEEEETTTTEEEEEET--TSCSCE--------------EEECSSCSCCCEEEEET---TTTEEEEEET
T ss_pred EEEEEECCCC-EEEEEECCCCeEEEEEC--CCCCcE--------------EEEeCCCCCcceEEEEe---CCCEEEEEEC
Confidence 7889998653 8999996 689998863 233110 12222334578999996 4788988532
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCCCCccce
Q 006811 230 CDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGG 309 (630)
Q Consensus 230 ~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~~~H~GG 309 (630)
. ..+|.++..++. ..++++.. .....-
T Consensus 100 ~------------------------------------~~~I~v~~~dG~-------------~~~~l~~~----~l~~P~ 126 (628)
T 4a0p_A 100 G------------------------------------TNRIEVSKLDGQ-------------HRQVLVWK----DLDSPR 126 (628)
T ss_dssp T------------------------------------TTEEEEEETTST-------------TCEEEECS----SCCCEE
T ss_pred C------------------------------------CCEEEEEecCCC-------------cEEEEEeC----CCCCcc
Confidence 1 026777665432 22334321 123346
Q ss_pred eeEEcCCCCeEEEEe-CCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCeE
Q 006811 310 QLLFGPTDGYMYFMM-GDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEI 388 (630)
Q Consensus 310 ~L~FGp~DG~LYv~~-GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI 388 (630)
.|+++|.+|+||++- |+ .++|.|++.||. ..++
T Consensus 127 ~iavdp~~G~lY~tD~g~-----------------~~~I~r~~~dG~-----------------------------~~~~ 160 (628)
T 4a0p_A 127 ALALDPAEGFMYWTEWGG-----------------KPKIDRAAMDGS-----------------------------ERTT 160 (628)
T ss_dssp EEEEETTTTEEEEEECSS-----------------SCEEEEEETTSC-----------------------------SCEE
T ss_pred cEEEccCCCeEEEeCCCC-----------------CCEEEEEeCCCC-----------------------------ceEE
Confidence 799998789999984 21 458999999983 2355
Q ss_pred EEeccccceeeeecCCCCCeeEEEeccCCCc
Q 006811 389 WALGLRNPWRCSFDSDRPSYFMCADVGQDVY 419 (630)
Q Consensus 389 ~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~ 419 (630)
..-++..|.++++|+..+ +||.+|.+.+..
T Consensus 161 l~~~~~~P~GlalD~~~~-~LY~aD~~~~~I 190 (628)
T 4a0p_A 161 LVPNVGRANGLTIDYAKR-RLYWTDLDTNLI 190 (628)
T ss_dssp EECSCSSEEEEEEETTTT-EEEEEETTTTEE
T ss_pred EECCCCCcceEEEccccC-EEEEEECCCCEE
Confidence 566899999999999866 799999877643
No 27
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.91 E-value=0.0011 Score=65.27 Aligned_cols=152 Identities=15% Similarity=0.124 Sum_probs=96.8
Q ss_pred eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
.++++.+++. +||+++. .++|++++. + +.. . ..+...+..+..+||+||+ ++++|++-.
T Consensus 39 ~gi~~d~~~~-~ly~~d~~~~~I~~~~~-~-g~~--~------------~~~~~~~~~~p~~ia~d~~---~~~lyv~d~ 98 (267)
T 1npe_A 39 IGLAFDCVDK-VVYWTDISEPSIGRASL-H-GGE--P------------TTIIRQDLGSPEGIALDHL---GRTIFWTDS 98 (267)
T ss_dssp EEEEEETTTT-EEEEEETTTTEEEEEES-S-SCC--C------------EEEECTTCCCEEEEEEETT---TTEEEEEET
T ss_pred EEEEEecCCC-EEEEEECCCCEEEEEec-C-CCC--c------------EEEEECCCCCccEEEEEec---CCeEEEEEC
Confidence 6788898753 8999996 689998863 2 321 0 0111122356789999974 788988542
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCCCCccce
Q 006811 230 CDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGG 309 (630)
Q Consensus 230 ~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~~~H~GG 309 (630)
. ..+|.++..++. ..+.++.. ....-.
T Consensus 99 ~------------------------------------~~~I~~~~~~g~-------------~~~~~~~~----~~~~P~ 125 (267)
T 1npe_A 99 Q------------------------------------LDRIEVAKMDGT-------------QRRVLFDT----GLVNPR 125 (267)
T ss_dssp T------------------------------------TTEEEEEETTSC-------------SCEEEECS----SCSSEE
T ss_pred C------------------------------------CCEEEEEEcCCC-------------CEEEEEEC----CCCCcc
Confidence 1 026777765322 22333321 123345
Q ss_pred eeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCeEE
Q 006811 310 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 389 (630)
Q Consensus 310 ~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI~ 389 (630)
.|.|+|.+|+||++-... ..++|.|++.|+.. ...+.
T Consensus 126 ~i~vd~~~g~lyv~~~~~---------------~~~~I~~~~~dg~~----------------------------~~~~~ 162 (267)
T 1npe_A 126 GIVTDPVRGNLYWTDWNR---------------DNPKIETSHMDGTN----------------------------RRILA 162 (267)
T ss_dssp EEEEETTTTEEEEEECCS---------------SSCEEEEEETTSCC----------------------------CEEEE
T ss_pred EEEEeeCCCEEEEEECCC---------------CCcEEEEEecCCCC----------------------------cEEEE
Confidence 799999458999985220 14679999998830 11233
Q ss_pred EeccccceeeeecCCCCCeeEEEeccCCCc
Q 006811 390 ALGLRNPWRCSFDSDRPSYFMCADVGQDVY 419 (630)
Q Consensus 390 A~GlRNP~r~afD~~~g~~l~~~DvG~d~~ 419 (630)
..++..|.++++|+..+ +||++|.+.+..
T Consensus 163 ~~~~~~P~gia~d~~~~-~lyv~d~~~~~I 191 (267)
T 1npe_A 163 QDNLGLPNGLTFDAFSS-QLCWVDAGTHRA 191 (267)
T ss_dssp CTTCSCEEEEEEETTTT-EEEEEETTTTEE
T ss_pred ECCCCCCcEEEEcCCCC-EEEEEECCCCEE
Confidence 35788999999999755 799999987543
No 28
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.87 E-value=0.00056 Score=73.04 Aligned_cols=60 Identities=8% Similarity=0.112 Sum_probs=37.5
Q ss_pred eeEEEcC-CCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCce--e-eeeeCCCCCCCCEEEE
Q 006811 151 LNMVAHP-DGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGL--M-GMAFHPNFAKNGRFFA 226 (630)
Q Consensus 151 ~~ma~~p-DGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GL--L-GiAfhPdF~~Ng~~Yv 226 (630)
..+++.| +| +|||++..|+|++++. +.+. +. .+..+ ...+..|. . +|||||+ ++++|+
T Consensus 222 ~~iav~p~~g--~lyv~d~~~~I~~~d~-~~~~---~~-----~~~~~----~~~g~~~~~P~~~ia~~p~---~g~lyv 283 (409)
T 3hrp_A 222 GAVALDETEE--WLYFVDSNKNFGRFNV-KTQE---VT-----LIKQL----ELSGSLGTNPGPYLIYYFV---DSNFYM 283 (409)
T ss_dssp CBCEECTTSS--EEEEECTTCEEEEEET-TTCC---EE-----EEEEC----CCCSCCCCSSCCEEEEETT---TTEEEE
T ss_pred EEEEEeCCCC--eEEEEECCCcEEEEEC-CCCC---EE-----EEecc----cccCCCCCCccccEEEeCC---CCEEEE
Confidence 7889999 55 8999999999999873 3221 11 00000 01112233 3 9999983 589998
Q ss_pred EE
Q 006811 227 SF 228 (630)
Q Consensus 227 sY 228 (630)
+-
T Consensus 284 ~d 285 (409)
T 3hrp_A 284 SD 285 (409)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 29
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.82 E-value=0.00055 Score=77.59 Aligned_cols=160 Identities=14% Similarity=0.148 Sum_probs=102.0
Q ss_pred EeeCce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCC
Q 006811 145 IGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKN 221 (630)
Q Consensus 145 va~Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~N 221 (630)
+..++. ++|++.+++. +||+++. .++|+.+.. + |+... ..+...+....-|||+|+ .+
T Consensus 35 ~~~~~~~~~~ld~~~~~~-~ly~sD~~~~~I~r~~~-~-g~~~~-------------~~v~~~~~~~P~GlAvD~---~~ 95 (619)
T 3s94_A 35 VVGGLEDAAAVDFVFSHG-LIYWSDVSEEAIKRTEF-N-KTESV-------------QNVVVSGLLSPDGLACDW---LG 95 (619)
T ss_dssp -CBCCSCEEEEEEETTTT-EEEEEETTTTEEEEEEC-------C-------------EEEECSSCSCEEEEEEET---TT
T ss_pred EEcCCCceEEEEEEeCCC-EEEEEECCCCeEEEEEc-c-CCCce-------------EEEEeCCCCCcCeEEEEe---cC
Confidence 444554 7899998653 8999997 588988763 2 32100 112233445678999997 37
Q ss_pred CEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEecc
Q 006811 222 GRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGL 301 (630)
Q Consensus 222 g~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~ 301 (630)
+.+|+.-+.. .+|.++..++. ..++++.
T Consensus 96 ~~ly~~d~~~------------------------------------~~I~v~~~dG~-------------~~~~l~~--- 123 (619)
T 3s94_A 96 EKLYWTDSET------------------------------------NRIEVSNLDGS-------------LRKVLFW--- 123 (619)
T ss_dssp TEEEEEETTT------------------------------------TEEEEEETTSC-------------SCEEEEC---
T ss_pred CEEEEEeCCC------------------------------------CEEEEEECCCC-------------CEEEEEe---
Confidence 8898864210 26777665432 2334442
Q ss_pred CCCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCC
Q 006811 302 SFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSED 381 (630)
Q Consensus 302 P~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~ 381 (630)
....+--.|+++|.+|+||++- -+ + .++|.|++.||.
T Consensus 124 -~~l~~P~~Iavdp~~g~ly~tD--~g---------~-----~~~I~r~~~dG~-------------------------- 160 (619)
T 3s94_A 124 -QELDQPRAIALDPSSGFMYWTD--WG---------E-----VPKIERAGMDGS-------------------------- 160 (619)
T ss_dssp -SSCSCCCCEEEETTTTEEEEEE--CS---------S-----SCEEEEEETTSC--------------------------
T ss_pred -CCCCCCceEEEecCCCeEEEec--cC---------C-----CCEEEEEECCCC--------------------------
Confidence 1223345799999679999994 11 1 368999999983
Q ss_pred CCCCCeEEEeccccceeeeecCCCCCeeEEEeccCCCcee
Q 006811 382 SGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEE 421 (630)
Q Consensus 382 ~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EE 421 (630)
.+..+..-.+..|.++++|+..+ +||++|.+.+..+.
T Consensus 161 --~~~~l~~~~~~~P~Glald~~~~-~LY~aD~~~~~I~~ 197 (619)
T 3s94_A 161 --SRFIIINSEIYWPNGLTLDYEEQ-KLYWADAKLNFIHK 197 (619)
T ss_dssp --SCEEEECSSCSSEEEEEEETTTT-EEEEEETTTCCEEE
T ss_pred --ceEEEEeCCCCCCcEEEEEccCC-EEEEEeCCCCeEEE
Confidence 12234445788999999999876 79999988765433
No 30
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.76 E-value=0.018 Score=63.76 Aligned_cols=202 Identities=12% Similarity=0.125 Sum_probs=103.3
Q ss_pred eeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecC-------CCCchhhhhhcccCCCccCCCCCCCCCC
Q 006811 309 GQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVD-------NIPSAAEIEKLGLWGSYSIPKDNPFSED 381 (630)
Q Consensus 309 G~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvD-------g~p~~~~~~~~~~~g~YsIP~DNPF~~~ 381 (630)
..|.+.|.+|+||++--. .|+|+|+|++ +. ..|.+|..-.
T Consensus 250 ~giavdp~~g~LYvtd~~-----------------~g~V~r~d~~~~~~~~~tg---------~~~tp~~~~~------- 296 (496)
T 3kya_A 250 NGATIHPINGELYFNSYE-----------------KGQVFRLDLVDYFKTIKNG---------GSWDPIVKNN------- 296 (496)
T ss_dssp CCEEECTTTCCEEEEETT-----------------TTEEEEECHHHHHHHHHTT---------CCCCCBGGGC-------
T ss_pred eEEEEcCCCCeEEEEECC-----------------CCEEEEEecccccccccCc---------eeeccccccc-------
Confidence 457888877899998642 3579999987 21 1112221000
Q ss_pred CCCCCeEEEeccc-cceeeeecCCCCCeeEEEeccCCCceeEEEeccCCCCCcc----cccCCCcCCCCCCCCCCCCCCC
Q 006811 382 SGLQPEIWALGLR-NPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRGGNYGWR----LYEGPYLFTPLETPGGITPLNS 456 (630)
Q Consensus 382 ~~~~pEI~A~GlR-NP~r~afD~~~g~~l~~~DvG~d~~EEIn~I~~G~NYGWp----~~eG~~~~~p~~~p~~~~~~~~ 456 (630)
.+...++++.+-. -|++++|||... .||++|.+....-.++. -+.-||- .+-|... ...+. .+.
T Consensus 297 ~g~~~~l~~~~~~~~p~~ia~~p~G~-~lYvaD~~~h~I~kid~---dg~~~~~~~~~~~aG~~g-~~G~~-DG~----- 365 (496)
T 3kya_A 297 PNTFKQLFTIADPSWEFQIFIHPTGK-YAYFGVINNHYFMRSDY---DEIKKEFITPYNFVGGYK-QSGYR-DDV----- 365 (496)
T ss_dssp TTTEEEEEECSSSSCCEEEEECTTSS-EEEEEETTTTEEEEEEE---ETTTTEECCCEEEEEBTT-BCCCB-CCB-----
T ss_pred ccccceeEecCCCCCceEEEEcCCCC-EEEEEeCCCCEEEEEec---CCCcceecccEEecCCCC-CCccc-CCc-----
Confidence 0011245555533 378999999854 69999998875444332 1111210 0001000 00000 000
Q ss_pred CCCCCceeeccCCccCCCCCCccccceeeecCCCCC-cccCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCC-
Q 006811 457 VSPIFPVLGYNHSEVNKKEGSASITGGYFYRSMTDP-CMFGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDS- 534 (630)
Q Consensus 457 ~~~i~Pi~~y~H~~~~~~~gs~S~tGg~vYrG~~fP-~l~G~ylfgD~~sg~lw~~~~~p~~sG~~~~~~i~f~c~~~~- 534 (630)
.. -..+ ..|.+|.+..-.++- .-.|.++++|....+|+.+. | .|. +..+ .-.+..
T Consensus 366 --~~--~a~f-----------~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~--~--~G~--v~Ti--aG~g~~~ 422 (496)
T 3kya_A 366 --GT--EARM-----------NNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT--P--EGI--VSTY--AGRGAST 422 (496)
T ss_dssp --GG--GCBC-----------SSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC--T--TCB--EEEE--EESCTTH
T ss_pred --cc--cccc-----------CCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe--C--CCC--EEEE--ecccccc
Confidence 00 0011 245534443211110 13578999999999999886 3 353 2222 111110
Q ss_pred ---c-ccccccCC-cC-CCCCCccceEEEcCC-CcEEEEeCC--eEEEEecC
Q 006811 535 ---P-IQCKVLPG-ND-LPSLGYIYSFGEDNR-KDIFILTSD--GVYRVVRP 577 (630)
Q Consensus 535 ---p-~~c~~~~g-~~-~~~~gri~sf~ed~d-GeLYvlts~--gIyRiv~p 577 (630)
+ ..|-+..| .. ...+.+|.+++.|++ |.|||++.+ .|.||...
T Consensus 423 ~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 423 SLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp HHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred cccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECC
Confidence 0 00111122 11 123668999999997 999999974 68888753
No 31
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.69 E-value=0.00074 Score=65.31 Aligned_cols=149 Identities=13% Similarity=0.187 Sum_probs=90.4
Q ss_pred eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..|++.+|| ++||++. .|.|++++ .++.... + ..........+|+++| +|++|+.-.
T Consensus 111 ~~i~~~~~g--~l~v~~~~~~~i~~~~---~~~~~~~-------~------~~~~~~~~p~~i~~~~----~g~l~v~~~ 168 (270)
T 1rwi_B 111 EGLAVDTQG--AVYVADRGNNRVVKLA---AGSKTQT-------V------LPFTGLNDPDGVAVDN----SGNVYVTDT 168 (270)
T ss_dssp EEEEECTTC--CEEEEEGGGTEEEEEC---TTCCSCE-------E------CCCCSCCSCCCEEECT----TCCEEEEEG
T ss_pred cceEECCCC--CEEEEECCCCEEEEEE---CCCceeE-------e------eccccCCCceeEEEeC----CCCEEEEEC
Confidence 789999998 6999986 68898874 2321110 0 0112234568899997 577888643
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCCCCccce
Q 006811 230 CDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGG 309 (630)
Q Consensus 230 ~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~~~H~GG 309 (630)
.. .+|.+|..++. .. ... . ........
T Consensus 169 ~~------------------------------------~~i~~~~~~~~-------------~~-~~~--~-~~~~~~p~ 195 (270)
T 1rwi_B 169 DN------------------------------------NRVVKLEAESN-------------NQ-VVL--P-FTDITAPW 195 (270)
T ss_dssp GG------------------------------------TEEEEECTTTC-------------CE-EEC--C-CSSCCSEE
T ss_pred CC------------------------------------CEEEEEecCCC-------------ce-Eee--c-ccCCCCce
Confidence 21 15666653211 11 111 0 11113345
Q ss_pred eeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCeEE
Q 006811 310 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 389 (630)
Q Consensus 310 ~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI~ 389 (630)
.|.+++ ||.|||+.... ++|.+++.++.. + ..+-
T Consensus 196 ~i~~d~-~g~l~v~~~~~-----------------~~v~~~~~~~~~---------------~-------------~~~~ 229 (270)
T 1rwi_B 196 GIAVDE-AGTVYVTEHNT-----------------NQVVKLLAGSTT---------------S-------------TVLP 229 (270)
T ss_dssp EEEECT-TCCEEEEETTT-----------------SCEEEECTTCSC---------------C-------------EECC
T ss_pred EEEECC-CCCEEEEECCC-----------------CcEEEEcCCCCc---------------c-------------eeec
Confidence 799999 99999987532 348999887720 0 0011
Q ss_pred EeccccceeeeecCCCCCeeEEEeccCCCceeE
Q 006811 390 ALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEV 422 (630)
Q Consensus 390 A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEI 422 (630)
.-|+.+|.++++|+. | +||++|.+.+....+
T Consensus 230 ~~~~~~p~~i~~~~~-g-~l~v~~~~~~~v~~~ 260 (270)
T 1rwi_B 230 FTGLNTPLAVAVDSD-R-TVYVADRGNDRVVKL 260 (270)
T ss_dssp CCSCSCEEEEEECTT-C-CEEEEEGGGTEEEEE
T ss_pred cCCCCCceeEEECCC-C-CEEEEECCCCEEEEE
Confidence 135688999999986 4 599999987654333
No 32
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.67 E-value=0.002 Score=68.24 Aligned_cols=158 Identities=14% Similarity=0.195 Sum_probs=99.0
Q ss_pred EeeCce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCC
Q 006811 145 IGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKN 221 (630)
Q Consensus 145 va~Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~N 221 (630)
+..++. .+|++.+.+. +||+++. .++|+++++ +|+... .+...+....-|||+|| .+
T Consensus 154 ~~~~~~~p~glavd~~~g-~lY~~d~~~~~I~~~~~--dg~~~~--------------~l~~~~l~~P~giavdp---~~ 213 (386)
T 3v65_B 154 VSTGLESPGGLAVDWVHD-KLYWTDSGTSRIEVANL--DGAHRK--------------VLLWQSLEKPRAIALHP---ME 213 (386)
T ss_dssp ECSSCSCCCCEEEETTTT-EEEEEETTTTEEEECBT--TSCSCE--------------EEECSSCSCEEEEEEET---TT
T ss_pred EeCCCCCccEEEEEeCCC-eEEEEcCCCCeEEEEeC--CCCceE--------------EeecCCCCCCcEEEEEc---CC
Confidence 334554 6788887553 7999986 577887653 232111 11112334578999998 47
Q ss_pred CEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEecc
Q 006811 222 GRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGL 301 (630)
Q Consensus 222 g~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~ 301 (630)
|++|++-... ..+|.|+..++. ..+++...
T Consensus 214 g~ly~td~~~-----------------------------------~~~I~r~~~dG~-------------~~~~~~~~-- 243 (386)
T 3v65_B 214 GTIYWTDWGN-----------------------------------TPRIEASSMDGS-------------GRRIIADT-- 243 (386)
T ss_dssp TEEEEEECSS-----------------------------------SCEEEEEETTSC-------------SCEEEECS--
T ss_pred CeEEEeccCC-----------------------------------CCEEEEEeCCCC-------------CcEEEEEC--
Confidence 8888753210 127877775432 23344321
Q ss_pred CCCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCC
Q 006811 302 SFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSED 381 (630)
Q Consensus 302 P~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~ 381 (630)
..+.-..|+|+|.+++|||+-. ..++|.|++.||.
T Consensus 244 --~~~~PnGlavd~~~~~lY~aD~-----------------~~~~I~~~d~dG~-------------------------- 278 (386)
T 3v65_B 244 --HLFWPNGLTIDYAGRRMYWVDA-----------------KHHVIERANLDGS-------------------------- 278 (386)
T ss_dssp --SCSCEEEEEEEGGGTEEEEEET-----------------TTTEEEEECTTSC--------------------------
T ss_pred --CCCCeeeEEEeCCCCEEEEEEC-----------------CCCEEEEEeCCCC--------------------------
Confidence 2344557999975789999832 2357999999882
Q ss_pred CCCCCeEEEeccccceeeeecCCCCCeeEEEeccCCCceeE
Q 006811 382 SGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEV 422 (630)
Q Consensus 382 ~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEI 422 (630)
.+..+...++..|.+++++.+ .||++|.+.+....+
T Consensus 279 --~~~~~~~~~~~~P~giav~~~---~ly~td~~~~~V~~~ 314 (386)
T 3v65_B 279 --HRKAVISQGLPHPFAITVFED---SLYWTDWHTKSINSA 314 (386)
T ss_dssp --SCEEEECSSCSSEEEEEEETT---EEEEEETTTTEEEEE
T ss_pred --eeEEEEECCCCCceEEEEECC---EEEEeeCCCCeEEEE
Confidence 123566678899999999643 699999876543333
No 33
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.65 E-value=0.0077 Score=60.23 Aligned_cols=166 Identities=16% Similarity=0.193 Sum_probs=97.6
Q ss_pred EEEEEeeCce--eeEEEcCCCCceEEEEe-cCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 141 CLEKIGNGSY--LNMVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 141 ~le~va~Gl~--~~ma~~pDGs~RlfV~e-q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
.++.+..+.. ..+++.||| ++|++. ..|.|++++ ++.+. .. .+.........+|+++|
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~g--~l~~~~~~~~~i~~~d-~~~~~--~~-------------~~~~~~~~~~~~i~~~~- 96 (333)
T 2dg1_A 36 PWLEISKKGLQLEGLNFDRQG--QLFLLDVFEGNIFKIN-PETKE--IK-------------RPFVSHKANPAAIKIHK- 96 (333)
T ss_dssp EEEEEESSCCCEEEEEECTTS--CEEEEETTTCEEEEEC-TTTCC--EE-------------EEEECSSSSEEEEEECT-
T ss_pred eeEEEeccCccccCcEECCCC--CEEEEECCCCEEEEEe-CCCCc--EE-------------EEeeCCCCCcceEEECC-
Confidence 3444544433 678889998 699876 478899986 33221 11 11112235678999997
Q ss_pred CCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEE
Q 006811 218 FAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIF 297 (630)
Q Consensus 218 F~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il 297 (630)
+|++|+.-..+.. ....|.+|..+.. ..+.++
T Consensus 97 ---dg~l~v~~~~~~~--------------------------------~~~~i~~~d~~~~-------------~~~~~~ 128 (333)
T 2dg1_A 97 ---DGRLFVCYLGDFK--------------------------------STGGIFAATENGD-------------NLQDII 128 (333)
T ss_dssp ---TSCEEEEECTTSS--------------------------------SCCEEEEECTTSC-------------SCEEEE
T ss_pred ---CCcEEEEeCCCCC--------------------------------CCceEEEEeCCCC-------------EEEEEE
Confidence 4778886532100 0125666643211 223333
Q ss_pred EeccCCCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCC
Q 006811 298 TMGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNP 377 (630)
Q Consensus 298 ~~~~P~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNP 377 (630)
.. . .....-..|.|+| ||.||++...+.. ....++|+|++.++.
T Consensus 129 ~~-~-~~~~~~~~i~~d~-~g~l~v~~~~~~~-----------~~~~~~l~~~~~~~~---------------------- 172 (333)
T 2dg1_A 129 ED-L-STAYCIDDMVFDS-KGGFYFTDFRGYS-----------TNPLGGVYYVSPDFR---------------------- 172 (333)
T ss_dssp CS-S-SSCCCEEEEEECT-TSCEEEEECCCBT-----------TBCCEEEEEECTTSC----------------------
T ss_pred cc-C-ccCCcccceEECC-CCCEEEEeccccc-----------cCCCceEEEEeCCCC----------------------
Confidence 21 1 1122334689999 9999998754211 124678999998762
Q ss_pred CCCCCCCCCeEEEeccccceeeeecCCCCCeeEEEeccCC
Q 006811 378 FSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQD 417 (630)
Q Consensus 378 F~~~~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d 417 (630)
..+.+..++..|.+++|++.. ..||+++.+.+
T Consensus 173 -------~~~~~~~~~~~~~~i~~~~dg-~~l~v~~~~~~ 204 (333)
T 2dg1_A 173 -------TVTPIIQNISVANGIALSTDE-KVLWVTETTAN 204 (333)
T ss_dssp -------CEEEEEEEESSEEEEEECTTS-SEEEEEEGGGT
T ss_pred -------EEEEeecCCCcccceEECCCC-CEEEEEeCCCC
Confidence 113344567788999999974 36999886543
No 34
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.64 E-value=0.0028 Score=66.07 Aligned_cols=159 Identities=13% Similarity=0.184 Sum_probs=100.3
Q ss_pred EeeCce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCC
Q 006811 145 IGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKN 221 (630)
Q Consensus 145 va~Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~N 221 (630)
+..++. .+|++.+.+. +||+++. .++|+++++ +|+... .+...+....-|||+|| .+
T Consensus 111 ~~~~~~~p~glavd~~~g-~ly~~d~~~~~I~~~~~--dG~~~~--------------~l~~~~l~~P~~iavdp---~~ 170 (349)
T 3v64_C 111 VSTGLESPGGLAVDWVHD-KLYWTDSGTSRIEVANL--DGAHRK--------------VLLWQSLEKPRAIALHP---ME 170 (349)
T ss_dssp ECSSCSCCCEEEEETTTT-EEEEEETTTTEEEEEET--TSCSCE--------------EEECTTCSCEEEEEEET---TT
T ss_pred EeCCCCCccEEEEecCCC-eEEEEcCCCCeEEEEcC--CCCceE--------------EEEeCCCCCcceEEEec---Cc
Confidence 334554 6788887553 7999997 578988863 233111 11112234568999998 46
Q ss_pred CEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEecc
Q 006811 222 GRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGL 301 (630)
Q Consensus 222 g~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~ 301 (630)
|++|++-... ..+|.|+..++. ..++++.
T Consensus 171 g~ly~td~~~-----------------------------------~~~I~r~~~dG~-------------~~~~~~~--- 199 (349)
T 3v64_C 171 GTIYWTDWGN-----------------------------------TPRIEASSMDGS-------------GRRIIAD--- 199 (349)
T ss_dssp TEEEEEECSS-----------------------------------SCEEEEEETTSC-------------SCEESCC---
T ss_pred CeEEEeccCC-----------------------------------CCEEEEEeCCCC-------------CcEEEEE---
Confidence 8888763211 027878776442 1222221
Q ss_pred CCCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCC
Q 006811 302 SFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSED 381 (630)
Q Consensus 302 P~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~ 381 (630)
...+.-..|.|+|.++.||++-. ..++|.|++.||.
T Consensus 200 -~~~~~PnGla~d~~~~~lY~aD~-----------------~~~~I~~~~~dG~-------------------------- 235 (349)
T 3v64_C 200 -THLFWPNGLTIDYAGRRMYWVDA-----------------KHHVIERANLDGS-------------------------- 235 (349)
T ss_dssp -SSCSCEEEEEEETTTTEEEEEET-----------------TTTEEEEEETTSC--------------------------
T ss_pred -CCCCCcceEEEeCCCCEEEEEEC-----------------CCCEEEEEeCCCC--------------------------
Confidence 12334457999975789999832 1357999999982
Q ss_pred CCCCCeEEEeccccceeeeecCCCCCeeEEEeccCCCceeEE
Q 006811 382 SGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 423 (630)
Q Consensus 382 ~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn 423 (630)
.+..+...++..|.+++++. + +||++|-+.+....++
T Consensus 236 --~~~~~~~~~~~~P~giav~~--~-~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 236 --HRKAVISQGLPHPFAITVFE--D-SLYWTDWHTKSINSAN 272 (349)
T ss_dssp --SCEEEECSSCSSEEEEEEET--T-EEEEEETTTTEEEEEE
T ss_pred --ceEEEEeCCCCCceEEEEEC--C-EEEEecCCCCeEEEEE
Confidence 12345666789999999964 3 6999998876544443
No 35
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.61 E-value=0.0033 Score=73.39 Aligned_cols=156 Identities=13% Similarity=0.183 Sum_probs=97.9
Q ss_pred Cce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEE
Q 006811 148 GSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRF 224 (630)
Q Consensus 148 Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~ 224 (630)
++. .+||+.+.+. +||+++. .++|+++++ +|.... .+.........|||+|| .+|+|
T Consensus 469 ~l~~P~GLAvD~~~~-~LY~tD~~~~~I~v~~l--dG~~~~--------------~l~~~~l~~P~gIaVDp---~~g~L 528 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHS-NIYWTDSVLGTVSVADT--KGVKRK--------------TLFRENGSKPRAIVVDP---VHGFM 528 (791)
T ss_dssp SCSCCCEEEEETTTT-EEEEEETTTTEEEEEET--TSSSEE--------------EEEECTTCCEEEEEEET---TTTEE
T ss_pred CCCCcceeeeeecCC-cEEEEecCCCeEEEEeC--CCCeEE--------------EEEeCCCCCcceEEEec---CCCCE
Confidence 554 6788887764 7999997 688988864 233111 11122334578999998 47888
Q ss_pred EEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCCC
Q 006811 225 FASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFN 304 (630)
Q Consensus 225 YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~~ 304 (630)
|++-... ..+|.++..++. ..++|+.. .
T Consensus 529 YwtD~g~-----------------------------------~~~I~~~~~dG~-------------~~~~lv~~----~ 556 (791)
T 3m0c_C 529 YWTDWGT-----------------------------------PAKIKKGGLNGV-------------DIYSLVTE----N 556 (791)
T ss_dssp EEEECSS-----------------------------------SCEEEEEETTSC-------------CEEEEECS----S
T ss_pred EEecCCC-----------------------------------CCeEEEEecCCC-------------ceEEEEeC----C
Confidence 8753210 026777765432 23444431 2
Q ss_pred CccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCC
Q 006811 305 GHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGL 384 (630)
Q Consensus 305 ~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~ 384 (630)
..+-..|++++.+|.|||+-.. ..+|.|++.||. .
T Consensus 557 l~~P~GLavD~~~~~LYwaD~~-----------------~~~I~~~d~dG~----------------------------~ 591 (791)
T 3m0c_C 557 IQWPNGITLDLLSGRLYWVDSK-----------------LHSISSIDVNGG----------------------------N 591 (791)
T ss_dssp CSCEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSC----------------------------S
T ss_pred CCCceEEEEecCCCeEEEEeCC-----------------CCcEEEEecCCC----------------------------c
Confidence 2445679999768999998321 247999999983 0
Q ss_pred CCeEEEe--ccccceeeeecCCCCCeeEEEeccCCCceeEE
Q 006811 385 QPEIWAL--GLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 423 (630)
Q Consensus 385 ~pEI~A~--GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn 423 (630)
+..|... .+.+|++++++.. +||++|.+.+....+|
T Consensus 592 ~~~v~~~~~~l~~P~glav~~~---~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 592 RKTILEDEKRLAHPFSLAVFED---KVFWTDIINEAIFSAN 629 (791)
T ss_dssp CEEEEECTTTTSSEEEEEEETT---EEEEEETTTTEEEEEE
T ss_pred eEEEecCCCccCCCCEEEEeCC---EEEEEECCCCEEEEEe
Confidence 1223332 4789999999653 6999998776544444
No 36
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.58 E-value=0.0057 Score=60.01 Aligned_cols=152 Identities=13% Similarity=0.116 Sum_probs=95.3
Q ss_pred eCce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCE
Q 006811 147 NGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGR 223 (630)
Q Consensus 147 ~Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~ 223 (630)
.++. ..|++.+++. +|||++. .++|++++. + |.... .+...+.....+||+||+ +++
T Consensus 76 ~~~~~p~~ia~d~~~~-~lyv~d~~~~~I~~~~~-~-g~~~~--------------~~~~~~~~~P~~i~vd~~---~g~ 135 (267)
T 1npe_A 76 QDLGSPEGIALDHLGR-TIFWTDSQLDRIEVAKM-D-GTQRR--------------VLFDTGLVNPRGIVTDPV---RGN 135 (267)
T ss_dssp TTCCCEEEEEEETTTT-EEEEEETTTTEEEEEET-T-SCSCE--------------EEECSSCSSEEEEEEETT---TTE
T ss_pred CCCCCccEEEEEecCC-eEEEEECCCCEEEEEEc-C-CCCEE--------------EEEECCCCCccEEEEeeC---CCE
Confidence 4443 7899999754 8999997 588998863 2 32110 111122356789999984 689
Q ss_pred EEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCC
Q 006811 224 FFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSF 303 (630)
Q Consensus 224 ~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~ 303 (630)
+|+.-.... ..+|.++..++. ..+++...
T Consensus 136 lyv~~~~~~----------------------------------~~~I~~~~~dg~-------------~~~~~~~~---- 164 (267)
T 1npe_A 136 LYWTDWNRD----------------------------------NPKIETSHMDGT-------------NRRILAQD---- 164 (267)
T ss_dssp EEEEECCSS----------------------------------SCEEEEEETTSC-------------CCEEEECT----
T ss_pred EEEEECCCC----------------------------------CcEEEEEecCCC-------------CcEEEEEC----
Confidence 998642100 126777765432 12333321
Q ss_pred CCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCC
Q 006811 304 NGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSG 383 (630)
Q Consensus 304 ~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~ 383 (630)
.......|.|++..++||++--. .++|.+++.++.
T Consensus 165 ~~~~P~gia~d~~~~~lyv~d~~-----------------~~~I~~~~~~g~---------------------------- 199 (267)
T 1npe_A 165 NLGLPNGLTFDAFSSQLCWVDAG-----------------THRAECLNPAQP---------------------------- 199 (267)
T ss_dssp TCSCEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTEE----------------------------
T ss_pred CCCCCcEEEEcCCCCEEEEEECC-----------------CCEEEEEecCCC----------------------------
Confidence 12345679999933689998643 246999998872
Q ss_pred CCCeEEEeccccceeeeecCCCCCeeEEEeccCCC
Q 006811 384 LQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDV 418 (630)
Q Consensus 384 ~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~ 418 (630)
..+.+.-++..|.++++|. + +||++|.+.+.
T Consensus 200 -~~~~~~~~~~~P~gi~~d~--~-~lyva~~~~~~ 230 (267)
T 1npe_A 200 -GRRKVLEGLQYPFAVTSYG--K-NLYYTDWKTNS 230 (267)
T ss_dssp -EEEEEEECCCSEEEEEEET--T-EEEEEETTTTE
T ss_pred -ceEEEecCCCCceEEEEeC--C-EEEEEECCCCe
Confidence 1133445789999999983 3 69999988754
No 37
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.56 E-value=0.0028 Score=71.77 Aligned_cols=159 Identities=18% Similarity=0.203 Sum_probs=103.7
Q ss_pred eCce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCE
Q 006811 147 NGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGR 223 (630)
Q Consensus 147 ~Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~ 223 (630)
.++. ++|++.+.+. +||+++. .++|+.+.. + |+... .+...+-...-|||+|+ .++.
T Consensus 346 ~~l~~~~~ld~d~~~~-~ly~sD~~~~~I~r~~~-~-g~~~~--------------~v~~~~~~~p~GlAvD~---~~~~ 405 (619)
T 3s94_A 346 EDIRHAIAIDYDPVEG-YIYWTDDEVRAIRRSFI-D-GSGSQ--------------FVVTAQIAHPDGIAVDW---VARN 405 (619)
T ss_dssp SCCSSEEEEEEETTTT-EEEEEETTTTEEEEEET-T-SCSCE--------------EEECSSCSCCCEEEEET---TTTE
T ss_pred cccCccEEEEEEcCCC-eEEEEeCCCCeEEEEEc-C-CCccE--------------EEEECCCCCcCceEEec---ccCc
Confidence 4554 7889988442 8999996 688998863 2 43211 12222334567999985 3678
Q ss_pred EEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCC
Q 006811 224 FFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSF 303 (630)
Q Consensus 224 ~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~ 303 (630)
+|++=+. . .+|.+.+.++. ..++++..
T Consensus 406 lY~tD~~---~---------------------------------~~I~v~~~~G~-------------~~~~l~~~---- 432 (619)
T 3s94_A 406 LYWTDTG---T---------------------------------DRIEVTRLNGT-------------MRKILISE---- 432 (619)
T ss_dssp EEEEETT---T---------------------------------TEEEEEETTSC-------------SCEEEECT----
T ss_pred EEEEeCC---C---------------------------------CcEEEEeCCCC-------------eEEEEEEC----
Confidence 8875321 0 15665554332 22344321
Q ss_pred CCccceeeEEcCCCCeEEEEe-CCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCC
Q 006811 304 NGHHGGQLLFGPTDGYMYFMM-GDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDS 382 (630)
Q Consensus 304 ~~H~GG~L~FGp~DG~LYv~~-GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~ 382 (630)
....--.|++.|..|+||++- |. .++|.|++.||.
T Consensus 433 ~l~~P~~iavdp~~G~ly~tD~g~-----------------~~~I~r~~~dG~--------------------------- 468 (619)
T 3s94_A 433 DLEEPRAIVLDPMVGYMYWTDWGE-----------------IPKIERAALDGS--------------------------- 468 (619)
T ss_dssp TCCSEEEEEEETTTTEEEEEECSS-----------------SCEEEEEETTSC---------------------------
T ss_pred CCCCeeeEEEEcCCCcEEEecCCC-----------------CCEEEEEccCCC---------------------------
Confidence 234456799999569999984 21 367999999983
Q ss_pred CCCCeEEEeccccceeeeecCCCCCeeEEEeccCCCceeEEE
Q 006811 383 GLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDI 424 (630)
Q Consensus 383 ~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn~ 424 (630)
.+..+..-++..|.++++|+..+ +||.+|.+.+..+.+++
T Consensus 469 -~~~~l~~~~l~~P~GlalD~~~~-~LY~aD~~~~~I~~~~~ 508 (619)
T 3s94_A 469 -DRVVLVNTSLGWPNGLALDYDEG-KIYWGDAKTDKIEVMNT 508 (619)
T ss_dssp -SCEEEECSSCSCEEEEEEETTTT-EEEEEETTTTEEEEEES
T ss_pred -ccEEEEeCCCCCCeeeEEcccCC-EEEEEECCCCEEEEEec
Confidence 02234455799999999999776 79999999877666664
No 38
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.54 E-value=0.0069 Score=62.62 Aligned_cols=158 Identities=11% Similarity=0.145 Sum_probs=98.7
Q ss_pred EEeeCce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCC
Q 006811 144 KIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAK 220 (630)
Q Consensus 144 ~va~Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~ 220 (630)
.+..++. .++++.+.+. +||+++. .++|++++. +|.... .+.........|||+||.
T Consensus 73 ~~~~~l~~p~glavd~~~g-~ly~~d~~~~~I~~~~~--dG~~~~--------------~l~~~~~~~P~giavdp~--- 132 (318)
T 3sov_A 73 VVVSGLLSPDGLACDWLGE-KLYWTDSETNRIEVSNL--DGSLRK--------------VLFWQELDQPRAIALDPS--- 132 (318)
T ss_dssp EEEECCSCCCEEEEETTTT-EEEEEETTTTEEEEEET--TSCSCE--------------EEECSSCSSEEEEEEEGG---
T ss_pred EEcCCCCCccEEEEEcCCC-eEEEEECCCCEEEEEEC--CCCcEE--------------EEEeCCCCCccEEEEeCC---
Confidence 3445554 6788887543 7999996 578988863 233111 111123345689999984
Q ss_pred CCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEec
Q 006811 221 NGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMG 300 (630)
Q Consensus 221 Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~ 300 (630)
+|++|++-... ..+|.|+..++. ..++++..+
T Consensus 133 ~g~ly~td~~~-----------------------------------~~~I~r~~~dG~-------------~~~~~~~~~ 164 (318)
T 3sov_A 133 SGFMYWTDWGE-----------------------------------VPKIERAGMDGS-------------SRFIIINSE 164 (318)
T ss_dssp GTEEEEEECSS-----------------------------------SCEEEEEETTSC-------------SCEEEECSS
T ss_pred CCEEEEEecCC-----------------------------------CCEEEEEEcCCC-------------CeEEEEECC
Confidence 68888753210 127877765432 233444321
Q ss_pred cCCCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCC
Q 006811 301 LSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSE 380 (630)
Q Consensus 301 ~P~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~ 380 (630)
...-..|.|++.++.||++-. ..++|.|++.||.
T Consensus 165 ----l~~Pnglavd~~~~~lY~aD~-----------------~~~~I~~~d~dG~------------------------- 198 (318)
T 3sov_A 165 ----IYWPNGLTLDYEEQKLYWADA-----------------KLNFIHKSNLDGT------------------------- 198 (318)
T ss_dssp ----CSCEEEEEEETTTTEEEEEET-----------------TTTEEEEEETTSC-------------------------
T ss_pred ----CCCccEEEEeccCCEEEEEEC-----------------CCCEEEEEcCCCC-------------------------
Confidence 234457999985689999832 2457999999982
Q ss_pred CCCCCCeEEEe-ccccceeeeecCCCCCeeEEEeccCCCceeE
Q 006811 381 DSGLQPEIWAL-GLRNPWRCSFDSDRPSYFMCADVGQDVYEEV 422 (630)
Q Consensus 381 ~~~~~pEI~A~-GlRNP~r~afD~~~g~~l~~~DvG~d~~EEI 422 (630)
..+++.. ++..|.++++|.+ .+|.+|.+......+
T Consensus 199 ----~~~~~~~~~~~~P~glav~~~---~lywtd~~~~~V~~~ 234 (318)
T 3sov_A 199 ----NRQAVVKGSLPHPFALTLFED---ILYWTDWSTHSILAC 234 (318)
T ss_dssp ----SCEEEECSCCSCEEEEEEETT---EEEEEETTTTEEEEE
T ss_pred ----ceEEEecCCCCCceEEEEeCC---EEEEEecCCCeEEEE
Confidence 1233433 7899999999853 589999877543333
No 39
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.54 E-value=0.0051 Score=69.79 Aligned_cols=156 Identities=14% Similarity=0.184 Sum_probs=102.5
Q ss_pred eeCce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCC
Q 006811 146 GNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNG 222 (630)
Q Consensus 146 a~Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng 222 (630)
..|+. .+||..+.+. +||+++. .++|+++++ +|+... .+.........+||+|| .+|
T Consensus 76 ~~g~~~P~GlAvD~~~~-~LY~tD~~~~~I~v~~~--dG~~~~--------------~l~~~~l~~P~~iavdp---~~G 135 (628)
T 4a0p_A 76 EFGLDYPEGMAVDWLGK-NLYWADTGTNRIEVSKL--DGQHRQ--------------VLVWKDLDSPRALALDP---AEG 135 (628)
T ss_dssp CSSCSCCCEEEEETTTT-EEEEEETTTTEEEEEET--TSTTCE--------------EEECSSCCCEEEEEEET---TTT
T ss_pred eCCCCCcceEEEEeCCC-EEEEEECCCCEEEEEec--CCCcEE--------------EEEeCCCCCcccEEEcc---CCC
Confidence 34554 6788877653 7999997 688998874 243211 01112334578999998 488
Q ss_pred EEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccC
Q 006811 223 RFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLS 302 (630)
Q Consensus 223 ~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P 302 (630)
++|++-... ..+|.|+..++. +.++|++
T Consensus 136 ~lY~tD~g~-----------------------------------~~~I~r~~~dG~-------------~~~~l~~---- 163 (628)
T 4a0p_A 136 FMYWTEWGG-----------------------------------KPKIDRAAMDGS-------------ERTTLVP---- 163 (628)
T ss_dssp EEEEEECSS-----------------------------------SCEEEEEETTSC-------------SCEEEEC----
T ss_pred eEEEeCCCC-----------------------------------CCEEEEEeCCCC-------------ceEEEEC----
Confidence 888753210 127877776443 3344442
Q ss_pred CCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCC
Q 006811 303 FNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDS 382 (630)
Q Consensus 303 ~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~ 382 (630)
...+-..|.+++..+.||++-.. .++|.+++.||.
T Consensus 164 -~~~~P~GlalD~~~~~LY~aD~~-----------------~~~I~~~d~dG~--------------------------- 198 (628)
T 4a0p_A 164 -NVGRANGLTIDYAKRRLYWTDLD-----------------TNLIESSNMLGL--------------------------- 198 (628)
T ss_dssp -SCSSEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSC---------------------------
T ss_pred -CCCCcceEEEccccCEEEEEECC-----------------CCEEEEEcCCCC---------------------------
Confidence 22344579999845899998532 346999999982
Q ss_pred CCCCeEEEeccccceeeeecCCCCCeeEEEeccCCCceeEE
Q 006811 383 GLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 423 (630)
Q Consensus 383 ~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn 423 (630)
..++.+-++..|++++++. + +||.+|-+.+....+|
T Consensus 199 --~~~v~~~~l~~P~glav~~--~-~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 199 --NREVIADDLPHPFGLTQYQ--D-YIYWTDWSRRSIERAN 234 (628)
T ss_dssp --SCEEEEECCSCEEEEEEET--T-EEEEEETTTTEEEEEE
T ss_pred --ceEEeeccCCCceEEEEEC--C-EEEEecCCCCEEEEEE
Confidence 2278888999999999986 2 6999997665444443
No 40
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.48 E-value=0.0026 Score=63.70 Aligned_cols=151 Identities=15% Similarity=0.232 Sum_probs=90.9
Q ss_pred eeEEEcCCCCceEEEEe------------cCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCC
Q 006811 151 LNMVAHPDGSNRAFFSN------------QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNF 218 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~e------------q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF 218 (630)
..+++.||| |+||++ ..|.||.++ + ++. .. .........-||+|+|+
T Consensus 101 ~di~~d~dG--~l~~~~~~~~~~~~~~~~~~~~l~~~d-~-~g~--~~--------------~~~~~~~~pngi~~spd- 159 (297)
T 3g4e_A 101 NDGKVDPAG--RYFAGTMAEETAPAVLERHQGALYSLF-P-DHH--VK--------------KYFDQVDISNGLDWSLD- 159 (297)
T ss_dssp EEEEECTTS--CEEEEEEECCSBTTBCCTTCEEEEEEC-T-TSC--EE--------------EEEEEESBEEEEEECTT-
T ss_pred CCEEECCCC--CEEEecCCcccccccccCCCcEEEEEE-C-CCC--EE--------------EEeeccccccceEEcCC-
Confidence 568899999 799987 346788764 2 222 11 01111223468999984
Q ss_pred CCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEE
Q 006811 219 AKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFT 298 (630)
Q Consensus 219 ~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~ 298 (630)
..++|+.-+.. .+|.+|..+... ......+.+.+
T Consensus 160 --g~~lyv~~~~~------------------------------------~~i~~~~~d~~~--------G~~~~~~~~~~ 193 (297)
T 3g4e_A 160 --HKIFYYIDSLS------------------------------------YSVDAFDYDLQT--------GQISNRRSVYK 193 (297)
T ss_dssp --SCEEEEEEGGG------------------------------------TEEEEEEECTTT--------CCEEEEEEEEE
T ss_pred --CCEEEEecCCC------------------------------------CcEEEEeccCCC--------CcccCcEEEEE
Confidence 44687765421 267788764211 11112233333
Q ss_pred eccCCCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecC-CCCchhhhhhcccCCCccCCCCCC
Q 006811 299 MGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVD-NIPSAAEIEKLGLWGSYSIPKDNP 377 (630)
Q Consensus 299 ~~~P~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvD-g~p~~~~~~~~~~~g~YsIP~DNP 377 (630)
. +.....--.|.+++ ||.|||+.-.+ |+|.|+|++ |.
T Consensus 194 ~--~~~~~~p~g~~~d~-~G~lwva~~~~-----------------~~v~~~d~~tG~---------------------- 231 (297)
T 3g4e_A 194 L--EKEEQIPDGMCIDA-EGKLWVACYNG-----------------GRVIRLDPVTGK---------------------- 231 (297)
T ss_dssp C--CGGGCEEEEEEEBT-TSCEEEEEETT-----------------TEEEEECTTTCC----------------------
T ss_pred C--CCCCCCCCeeEECC-CCCEEEEEcCC-----------------CEEEEEcCCCce----------------------
Confidence 2 21112233699999 99999997542 359999987 42
Q ss_pred CCCCCCCCCeEEEeccccceeeeec-CCCCCeeEEEeccCCC
Q 006811 378 FSEDSGLQPEIWALGLRNPWRCSFD-SDRPSYFMCADVGQDV 418 (630)
Q Consensus 378 F~~~~~~~pEI~A~GlRNP~r~afD-~~~g~~l~~~DvG~d~ 418 (630)
.-..+..+.++|..|+|. +. +++||++......
T Consensus 232 -------~~~~i~~p~~~~t~~~f~g~d-~~~L~vt~~~~~~ 265 (297)
T 3g4e_A 232 -------RLQTVKLPVDKTTSCCFGGKN-YSEMYVTCARDGM 265 (297)
T ss_dssp -------EEEEEECSSSBEEEEEEESGG-GCEEEEEEBCTTC
T ss_pred -------EEEEEECCCCCceEEEEeCCC-CCEEEEEcCCcCC
Confidence 124556667889999998 54 3479999876543
No 41
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.44 E-value=0.081 Score=54.08 Aligned_cols=71 Identities=28% Similarity=0.293 Sum_probs=44.3
Q ss_pred EEEEEeeCc-e-eeEEEcCCCCceEEEEe-c--Cc--eEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeee
Q 006811 141 CLEKIGNGS-Y-LNMVAHPDGSNRAFFSN-Q--EG--KIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMA 213 (630)
Q Consensus 141 ~le~va~Gl-~-~~ma~~pDGs~RlfV~e-q--~G--~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiA 213 (630)
.+|+|++.. . .++++.||| |+||+. + .| +||.++ +| + + .+|-+.... .........||+
T Consensus 8 ~~~~v~~~~~~p~~va~~~~g--~~~v~~~~~~~~~~~l~~~~---~g--~-~-----~~~p~~~~~-~~~~~~~p~gv~ 73 (343)
T 2qe8_A 8 RLEVVAELSLAPGNITLTPDG--RLFLSLHQFYQPEMQVAELT---QD--G-L-----IPFPPQSGN-AIITFDTVLGIK 73 (343)
T ss_dssp CCEEEEEESSCEEEEEECTTS--CEEEEECGGGCCSCSEEEEE---TT--E-E-----EESCCCCSS-CCCCCSCEEEEE
T ss_pred eeEEEEEcCCCcceEEECCCC--CEEEEeCCCCCCceEEEEEC---CC--C-e-----ecCCCcccC-cccceeEeeEEE
Confidence 457777655 2 889999999 899996 3 35 677764 23 2 2 133332110 112234678999
Q ss_pred eCCCCCCCCEEEEEEe
Q 006811 214 FHPNFAKNGRFFASFN 229 (630)
Q Consensus 214 fhPdF~~Ng~~YvsYs 229 (630)
++| +|++||.-+
T Consensus 74 ~d~----~g~L~v~D~ 85 (343)
T 2qe8_A 74 SDG----NGIVWMLDN 85 (343)
T ss_dssp ECS----SSEEEEEEC
T ss_pred EcC----CCcEEEEcC
Confidence 997 588998654
No 42
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.43 E-value=0.014 Score=62.06 Aligned_cols=156 Identities=13% Similarity=0.171 Sum_probs=96.2
Q ss_pred eCce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCE
Q 006811 147 NGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGR 223 (630)
Q Consensus 147 ~Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~ 223 (630)
.++. .+|++.+.+. +||+++. .++|+++++ + |.... .+...+.....|||+||. +|+
T Consensus 156 ~~~~~p~glavD~~~~-~lY~~d~~~~~I~~~~~-~-g~~~~--------------~l~~~~~~~P~~iavdp~---~g~ 215 (400)
T 3p5b_L 156 RDIQAPDGLAVDWIHS-NIYWTDSVLGTVSVADT-K-GVKRK--------------TLFRENGSKPRAIVVDPV---HGF 215 (400)
T ss_dssp SSCSCEEEEEEETTTT-EEEEEETTTTEEEEECT-T-TCSEE--------------EEEECSSCCEEEEEEETT---TTE
T ss_pred CCCCCcccEEEEecCC-ceEEEECCCCeEEEEeC-C-CCceE--------------EEEeCCCCCcceEEEecc---cCe
Confidence 3554 6788887443 7999996 688988763 2 32111 111223345789999984 788
Q ss_pred EEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCC
Q 006811 224 FFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSF 303 (630)
Q Consensus 224 ~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~ 303 (630)
+|++-... ..+|.++..++. ..++++..
T Consensus 216 ly~td~~~-----------------------------------~~~I~~~~~dG~-------------~~~~~~~~---- 243 (400)
T 3p5b_L 216 MYWTDWGT-----------------------------------PAKIKKGGLNGV-------------DIYSLVTE---- 243 (400)
T ss_dssp EEEEECSS-----------------------------------SCCEEEEETTSC-------------SCEEEECS----
T ss_pred EEEEeCCC-----------------------------------CCEEEEEeCCCC-------------ccEEEEEC----
Confidence 88753210 025666665432 23344321
Q ss_pred CCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCC
Q 006811 304 NGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSG 383 (630)
Q Consensus 304 ~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~ 383 (630)
....-..|.|++.++.||++-. ...+|.|+|.||.
T Consensus 244 ~l~~P~glavd~~~~~lY~aD~-----------------~~~~I~~~d~dG~---------------------------- 278 (400)
T 3p5b_L 244 NIQWPNGITLDLLSGRLYWVDS-----------------KLHSISSIDVNGG---------------------------- 278 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEET-----------------TTTEEEEEETTSC----------------------------
T ss_pred CCCceEEEEEEeCCCEEEEEEC-----------------CCCEEEEEeCCCC----------------------------
Confidence 2234456999975789999822 1357999999983
Q ss_pred CCCeEEEe---ccccceeeeecCCCCCeeEEEeccCCCceeEE
Q 006811 384 LQPEIWAL---GLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 423 (630)
Q Consensus 384 ~~pEI~A~---GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn 423 (630)
..+++.. .+..|++++++.+ +||++|.+.+....++
T Consensus 279 -~~~~~~~~~~~l~~P~gl~v~~~---~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 279 -NRKTILEDEKRLAHPFSLAVFED---KVFWTDIINEAIFSAN 317 (400)
T ss_dssp -CCEEEEECSSTTSSEEEEEEETT---EEEEEESSSCSEEEEE
T ss_pred -ccEEEEeCCCCCCCCEEEEEeCC---EEEEecCCCCeEEEEE
Confidence 1233433 4789999999653 6999997765544444
No 43
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.40 E-value=0.0068 Score=65.41 Aligned_cols=30 Identities=17% Similarity=0.371 Sum_probs=24.0
Q ss_pred cccceeeeecCCCCCeeEEEeccCCCceeEE
Q 006811 393 LRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 423 (630)
Q Consensus 393 lRNP~r~afD~~~g~~l~~~DvG~d~~EEIn 423 (630)
|..|+++++|+.++ .||++|.+-+....|.
T Consensus 401 ~~~P~giavd~~~g-~lyVaD~~n~rIr~i~ 430 (433)
T 4hw6_A 401 FNHPTSIAYDMKRK-CFYIGDCDNHRVRKIA 430 (433)
T ss_dssp CSSEEEEEEETTTT-EEEEEEGGGTEEEEEE
T ss_pred eCCCcEEEEECCCC-EEEEEeCCCCEEEEEe
Confidence 78899999997666 6999999977654444
No 44
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.40 E-value=0.0099 Score=63.08 Aligned_cols=78 Identities=13% Similarity=0.037 Sum_probs=54.5
Q ss_pred cceeeEEcCCCCeEEEEeCCCCCCCCcccc-ccc-CCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCC
Q 006811 307 HGGQLLFGPTDGYMYFMMGDGGGTADPYNF-SQN-KKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGL 384 (630)
Q Consensus 307 ~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~-aQn-~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~ 384 (630)
.-..+.+.+ ||.+|++.--- ..||... .+. .....|.|+|++++.
T Consensus 166 ~pND~~v~~-~G~fyvt~~~~--ftd~~~~~~e~~~~~~~g~vyr~d~~~------------------------------ 212 (355)
T 3sre_A 166 SVNDIVAVG-PEHFYATNDHY--FIDPYLKSWEMHLGLAWSFVTYYSPND------------------------------ 212 (355)
T ss_dssp SEEEEEEEE-TTEEEEEESCS--CSSHHHHHHHHHTTCCCEEEEEECTTC------------------------------
T ss_pred CCceEEEeC-CCCEEecCCcE--eCCcccccchhhccCCccEEEEEECCe------------------------------
Confidence 445799999 99999965422 2343211 111 234579999998632
Q ss_pred CCeEEEeccccceeeeecCCCCCeeEEEeccCCCc
Q 006811 385 QPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVY 419 (630)
Q Consensus 385 ~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~ 419 (630)
.++.+-|+..|-|++|+|.. ++||++|.+....
T Consensus 213 -~~~~~~~l~~pNGia~spDg-~~lYvadt~~~~I 245 (355)
T 3sre_A 213 -VRVVAEGFDFANGINISPDG-KYVYIAELLAHKI 245 (355)
T ss_dssp -CEEEEEEESSEEEEEECTTS-SEEEEEEGGGTEE
T ss_pred -EEEeecCCcccCcceECCCC-CEEEEEeCCCCeE
Confidence 36789999999999999974 4799999987643
No 45
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.38 E-value=0.017 Score=59.11 Aligned_cols=147 Identities=13% Similarity=0.186 Sum_probs=92.5
Q ss_pred eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
.+|++.+.+. +||+++. .++|.+++. + |.. .+ .+.........|||+|| .+|++|++-.
T Consensus 80 ~glavd~~~~-~ly~~d~~~~~I~~~~~-~-g~~--~~------------~~~~~~~~~P~~iavdp---~~g~ly~~d~ 139 (316)
T 1ijq_A 80 DGLAVDWIHS-NIYWTDSVLGTVSVADT-K-GVK--RK------------TLFRENGSKPRAIVVDP---VHGFMYWTDW 139 (316)
T ss_dssp CEEEEETTTT-EEEEEETTTTEEEEEET-T-SSS--EE------------EEEECTTCCEEEEEEET---TTTEEEEEEC
T ss_pred CEEEEeecCC-eEEEEECCCCEEEEEeC-C-CCc--eE------------EEEECCCCCcceEEeCC---CCCEEEEEcc
Confidence 6788876553 7999986 688988863 2 321 10 11112334678999998 4788887532
Q ss_pred ecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCCCCccce
Q 006811 230 CDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGG 309 (630)
Q Consensus 230 ~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~~~H~GG 309 (630)
.. ..+|.++..++. ..+++... ..+.-.
T Consensus 140 ~~-----------------------------------~~~I~~~~~dG~-------------~~~~~~~~----~~~~P~ 167 (316)
T 1ijq_A 140 GT-----------------------------------PAKIKKGGLNGV-------------DIYSLVTE----NIQWPN 167 (316)
T ss_dssp SS-----------------------------------SCEEEEEETTSC-------------CEEEEECS----SCSCEE
T ss_pred CC-----------------------------------CCeEEEEcCCCC-------------CeEEEEEC----CCCCce
Confidence 10 026777765432 22333321 234556
Q ss_pred eeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCeEE
Q 006811 310 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 389 (630)
Q Consensus 310 ~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI~ 389 (630)
.|.+++.++.||++-.. .++|.++|.||. ..+++
T Consensus 168 gla~d~~~~~lY~~D~~-----------------~~~I~~~d~dg~-----------------------------~~~~~ 201 (316)
T 1ijq_A 168 GITLDLLSGRLYWVDSK-----------------LHSISSIDVNGG-----------------------------NRKTI 201 (316)
T ss_dssp EEEEETTTTEEEEEETT-----------------TTEEEEEETTSC-----------------------------SCEEE
T ss_pred EEEEeccCCEEEEEECC-----------------CCeEEEEecCCC-----------------------------ceEEE
Confidence 79999846899998422 357999999882 12344
Q ss_pred Ee---ccccceeeeecCCCCCeeEEEeccCCC
Q 006811 390 AL---GLRNPWRCSFDSDRPSYFMCADVGQDV 418 (630)
Q Consensus 390 A~---GlRNP~r~afD~~~g~~l~~~DvG~d~ 418 (630)
+. ++.+|.++++|. + +||++|-+.+.
T Consensus 202 ~~~~~~~~~P~giav~~--~-~ly~~d~~~~~ 230 (316)
T 1ijq_A 202 LEDEKRLAHPFSLAVFE--D-KVFWTDIINEA 230 (316)
T ss_dssp EECTTTTSSEEEEEEET--T-EEEEEETTTTE
T ss_pred eecCCccCCcEEEEEEC--C-EEEEEECCCCe
Confidence 33 478999999984 3 69999977643
No 46
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.37 E-value=0.022 Score=55.71 Aligned_cols=156 Identities=12% Similarity=0.066 Sum_probs=91.1
Q ss_pred CCCcEEEEEeeC-ce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceee-CCCCceee
Q 006811 137 PQGLCLEKIGNG-SY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHF-DTEFGLMG 211 (630)
Q Consensus 137 p~G~~le~va~G-l~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~-~~e~GLLG 211 (630)
+.|-.++.+..+ +. ..|++.||| ++||++. .++|++++ ++ + +.+. .+.. .......+
T Consensus 107 ~~g~~~~~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~~-~~-g--~~~~------------~~~~~~~~~~p~~ 168 (286)
T 1q7f_A 107 QYGQFVRKFGATILQHPRGVTVDNKG--RIIVVECKVMRVIIFD-QN-G--NVLH------------KFGCSKHLEFPNG 168 (286)
T ss_dssp TTSCEEEEECTTTCSCEEEEEECTTS--CEEEEETTTTEEEEEC-TT-S--CEEE------------EEECTTTCSSEEE
T ss_pred CCCcEEEEecCccCCCceEEEEeCCC--CEEEEECCCCEEEEEc-CC-C--CEEE------------EeCCCCccCCcEE
Confidence 345445555432 22 789999998 7999986 68899885 22 2 2221 0100 12245789
Q ss_pred eeeCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCC
Q 006811 212 MAFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPS 291 (630)
Q Consensus 212 iAfhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~ 291 (630)
|+++| +|.+||+-+.+ .+|.+|..++
T Consensus 169 i~~~~----~g~l~v~~~~~------------------------------------~~i~~~~~~g-------------- 194 (286)
T 1q7f_A 169 VVVND----KQEIFISDNRA------------------------------------HCVKVFNYEG-------------- 194 (286)
T ss_dssp EEECS----SSEEEEEEGGG------------------------------------TEEEEEETTC--------------
T ss_pred EEECC----CCCEEEEECCC------------------------------------CEEEEEcCCC--------------
Confidence 99997 57888864321 2666775321
Q ss_pred CcEEEEEeccCCCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcc
Q 006811 292 EVRRIFTMGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYS 371 (630)
Q Consensus 292 ~~~~Il~~~~P~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~Ys 371 (630)
+ .+.+...+......-.|.|++ ||.|||+..... +.|.+++.++.
T Consensus 195 ~--~~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~~~----------------~~i~~~~~~g~---------------- 239 (286)
T 1q7f_A 195 Q--YLRQIGGEGITNYPIGVGINS-NGEILIADNHNN----------------FNLTIFTQDGQ---------------- 239 (286)
T ss_dssp C--EEEEESCTTTSCSEEEEEECT-TCCEEEEECSSS----------------CEEEEECTTSC----------------
T ss_pred C--EEEEEccCCccCCCcEEEECC-CCCEEEEeCCCC----------------EEEEEECCCCC----------------
Confidence 1 111222211112344699999 999999875321 25778877662
Q ss_pred CCCCCCCCCCCCCCCeEEEec--cccceeeeecCCCCCeeEEEec
Q 006811 372 IPKDNPFSEDSGLQPEIWALG--LRNPWRCSFDSDRPSYFMCADV 414 (630)
Q Consensus 372 IP~DNPF~~~~~~~pEI~A~G--lRNP~r~afD~~~g~~l~~~Dv 414 (630)
.-..+..+ ..+|+++++++. | +||+++.
T Consensus 240 -------------~~~~~~~~~~~~~~~~i~~~~~-g-~l~vs~~ 269 (286)
T 1q7f_A 240 -------------LISALESKVKHAQCFDVALMDD-G-SVVLASK 269 (286)
T ss_dssp -------------EEEEEEESSCCSCEEEEEEETT-T-EEEEEET
T ss_pred -------------EEEEEcccCCCCcceeEEECCC-C-cEEEECC
Confidence 01223322 345889999996 5 6999963
No 47
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.32 E-value=0.0087 Score=64.39 Aligned_cols=30 Identities=17% Similarity=0.363 Sum_probs=23.9
Q ss_pred cccceeeeecCCCCCeeEEEeccCCCceeEE
Q 006811 393 LRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 423 (630)
Q Consensus 393 lRNP~r~afD~~~g~~l~~~DvG~d~~EEIn 423 (630)
|..|+++++|+.++ .||++|.+-+....|.
T Consensus 398 ~~~P~giavd~~~g-~lyVaD~~n~rIr~i~ 427 (430)
T 3tc9_A 398 FNHPEGIVYDEERE-CFFIGDRENRRIRKIG 427 (430)
T ss_dssp CSSEEEEEEETTTT-EEEEEEGGGTEEEEEE
T ss_pred eCCCcEEEEECCCC-EEEEEECCCCeEEEEc
Confidence 67999999999666 6999999887644443
No 48
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.28 E-value=0.00051 Score=78.84 Aligned_cols=167 Identities=13% Similarity=0.155 Sum_probs=95.5
Q ss_pred EEEEeeCce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCC
Q 006811 142 LEKIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNF 218 (630)
Q Consensus 142 le~va~Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF 218 (630)
++.+..++. .+|++.+++. +||+++. .++|+++++ + +..... ... .+...+.....|||+++
T Consensus 398 ~~~~~~~~~~p~gla~d~~~~-~Ly~sD~~~~~I~~~~~-~-g~~~~~---~~~-------~~i~~~~~~P~glavD~-- 462 (699)
T 1n7d_A 398 YTSLIPNLRNVVALDTEVASN-RIYWSDLSQRMICSTQL-D-RAHGVS---SYD-------TVISRDIQAPDGLAVDW-- 462 (699)
T ss_dssp EECCSCCCTTCCCCEEETTTT-EEEECCTTTTSBEEEES-C-CCCC-C---CCC-------CBCCSCC--CCCEECCC--
T ss_pred ceeeeccCcceEEEccccccC-eEEEEecCCCeEEEEec-C-CCCCCc---ceE-------EEEeCCCCCcceEEEEe--
Confidence 344444444 7888888653 8999986 578988864 2 210000 000 11111223467899986
Q ss_pred CCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEE
Q 006811 219 AKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFT 298 (630)
Q Consensus 219 ~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~ 298 (630)
..+.||++-. . ..+|.++..++. ..++++.
T Consensus 463 -~~g~LY~tD~---~---------------------------------~~~I~v~d~dg~-------------~~~~l~~ 492 (699)
T 1n7d_A 463 -IHSNIYWTDS---V---------------------------------LGTVSVADTKGV-------------KRKTLFR 492 (699)
T ss_dssp -SSSBCEECCT---T---------------------------------TSCEEEEBSSSC-------------CEEEECC
T ss_pred -eCCcEEEEec---c---------------------------------CCeEEEEecCCC-------------ceEEEEe
Confidence 3677887321 1 014544443221 2233322
Q ss_pred eccCCCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCC
Q 006811 299 MGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPF 378 (630)
Q Consensus 299 ~~~P~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF 378 (630)
. ..+.-..|+++|.+|+||++-- + ..++|.|++.||..
T Consensus 493 ~----~~~~P~giavDp~~g~ly~td~--~--------------~~~~I~~~~~dG~~---------------------- 530 (699)
T 1n7d_A 493 E----QGSKPRAIVVDPVHGFMYWTDW--G--------------TPAKIKKGGLNGVD---------------------- 530 (699)
T ss_dssp C----SSCCCCCEECCSSSSCCEECCC--S--------------SSCCEEBCCSSSCC----------------------
T ss_pred C----CCCCcceEEEccCCCcEEEccc--C--------------CCCeEEEEeCCCCC----------------------
Confidence 1 1233356899986689998741 1 13789999998830
Q ss_pred CCCCCCCCeEEEeccccceeeeecCCCCCeeEEEeccCCCceeE
Q 006811 379 SEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEV 422 (630)
Q Consensus 379 ~~~~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEI 422 (630)
+..+...++..|.+++||+..+ +||++|.+.+..+.+
T Consensus 531 ------~~~l~~~~l~~PnGlavd~~~~-~LY~aD~~~~~I~~~ 567 (699)
T 1n7d_A 531 ------IYSLVTENIQWPNGITLDLLSG-RLYWVDSKLHSISSI 567 (699)
T ss_dssp ------CCEESCSSCSSCCCEEECTTTC-CEEEEETTTTEEEEE
T ss_pred ------eeEEEeCCCCCccEEEEeccCC-EEEEEecCCCeEEEE
Confidence 1123345788999999999876 699999877544433
No 49
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.18 E-value=0.017 Score=56.53 Aligned_cols=142 Identities=13% Similarity=0.143 Sum_probs=85.1
Q ss_pred eeEEE-cCCCCceEEEEec--CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 006811 151 LNMVA-HPDGSNRAFFSNQ--EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 227 (630)
Q Consensus 151 ~~ma~-~pDGs~RlfV~eq--~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Yvs 227 (630)
..+++ .++| ++||++. .+.|++++ + ++ +.+. .+.........+|+++| +|++||.
T Consensus 80 ~~i~~~~~~g--~l~v~~~~~~~~i~~~d-~-~g--~~~~------------~~~~~~~~~~~~i~~~~----~g~l~v~ 137 (286)
T 1q7f_A 80 NRVAVVRNSG--DIIVTERSPTHQIQIYN-Q-YG--QFVR------------KFGATILQHPRGVTVDN----KGRIIVV 137 (286)
T ss_dssp EEEEEETTTT--EEEEEECGGGCEEEEEC-T-TS--CEEE------------EECTTTCSCEEEEEECT----TSCEEEE
T ss_pred eEEEEEcCCC--eEEEEcCCCCCEEEEEC-C-CC--cEEE------------EecCccCCCceEEEEeC----CCCEEEE
Confidence 67788 5777 7999995 78898875 2 22 2221 01111224578999997 5778885
Q ss_pred EeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCCCCcc
Q 006811 228 FNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHH 307 (630)
Q Consensus 228 Ys~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~~~H~ 307 (630)
-... .+|.+|..++ +....+ ..+.....
T Consensus 138 ~~~~------------------------------------~~i~~~~~~g--------------~~~~~~--~~~~~~~~ 165 (286)
T 1q7f_A 138 ECKV------------------------------------MRVIIFDQNG--------------NVLHKF--GCSKHLEF 165 (286)
T ss_dssp ETTT------------------------------------TEEEEECTTS--------------CEEEEE--ECTTTCSS
T ss_pred ECCC------------------------------------CEEEEEcCCC--------------CEEEEe--CCCCccCC
Confidence 3210 1566664211 111122 22222223
Q ss_pred ceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCe
Q 006811 308 GGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPE 387 (630)
Q Consensus 308 GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pE 387 (630)
-..|.|++ ||.||++... .++|.+++.++. .
T Consensus 166 p~~i~~~~-~g~l~v~~~~-----------------~~~i~~~~~~g~-------------------------------~ 196 (286)
T 1q7f_A 166 PNGVVVND-KQEIFISDNR-----------------AHCVKVFNYEGQ-------------------------------Y 196 (286)
T ss_dssp EEEEEECS-SSEEEEEEGG-----------------GTEEEEEETTCC-------------------------------E
T ss_pred cEEEEECC-CCCEEEEECC-----------------CCEEEEEcCCCC-------------------------------E
Confidence 45799999 9999997532 245888887762 1
Q ss_pred EEEe---c-cccceeeeecCCCCCeeEEEeccCC
Q 006811 388 IWAL---G-LRNPWRCSFDSDRPSYFMCADVGQD 417 (630)
Q Consensus 388 I~A~---G-lRNP~r~afD~~~g~~l~~~DvG~d 417 (630)
+..+ | +..|.++++|+. | +||+++.+.+
T Consensus 197 ~~~~~~~g~~~~p~~i~~d~~-G-~l~v~~~~~~ 228 (286)
T 1q7f_A 197 LRQIGGEGITNYPIGVGINSN-G-EILIADNHNN 228 (286)
T ss_dssp EEEESCTTTSCSEEEEEECTT-C-CEEEEECSSS
T ss_pred EEEEccCCccCCCcEEEECCC-C-CEEEEeCCCC
Confidence 1111 2 467899999996 4 5999997653
No 50
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.18 E-value=0.014 Score=59.03 Aligned_cols=163 Identities=8% Similarity=0.048 Sum_probs=93.2
Q ss_pred eeEEEcC-CCCceEEEEecC------------------ceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceee
Q 006811 151 LNMVAHP-DGSNRAFFSNQE------------------GKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMG 211 (630)
Q Consensus 151 ~~ma~~p-DGs~RlfV~eq~------------------G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLG 211 (630)
-.|+..+ || ++||++.. |.|++++ ++.+. + .+........-|
T Consensus 129 ~~i~~d~~~G--~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d-~~~~~---~-------------~~~~~~~~~p~g 189 (322)
T 2fp8_A 129 YAVTVDQRTG--IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD-PSTKE---T-------------TLLLKELHVPGG 189 (322)
T ss_dssp EEEEECTTTC--CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE-TTTTE---E-------------EEEEEEESCCCE
T ss_pred ceEEEecCCC--EEEEECCcccccccccceehcccCCCceEEEEe-CCCCE---E-------------EEeccCCccCcc
Confidence 5688899 88 79999853 7788875 33221 1 111122345678
Q ss_pred eeeCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCC
Q 006811 212 MAFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPS 291 (630)
Q Consensus 212 iAfhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~ 291 (630)
||++|+ ..++||+-+.. .+|.+|..++.. ..
T Consensus 190 ia~~~d---g~~lyv~d~~~------------------------------------~~I~~~~~~~~~----------~~ 220 (322)
T 2fp8_A 190 AEVSAD---SSFVLVAEFLS------------------------------------HQIVKYWLEGPK----------KG 220 (322)
T ss_dssp EEECTT---SSEEEEEEGGG------------------------------------TEEEEEESSSTT----------TT
T ss_pred eEECCC---CCEEEEEeCCC------------------------------------CeEEEEECCCCc----------CC
Confidence 999974 34688865421 278888764321 11
Q ss_pred CcEEEEEeccCCCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCcc
Q 006811 292 EVRRIFTMGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYS 371 (630)
Q Consensus 292 ~~~~Il~~~~P~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~Ys 371 (630)
+.+ ++. .++. .-.|.+++ ||.|||+.......- | .....++|+|+|++|... ..|.
T Consensus 221 ~~~-~~~-~~~g----P~gi~~d~-~G~l~va~~~~~~~~-~------~~~~~~~v~~~d~~G~~~----------~~~~ 276 (322)
T 2fp8_A 221 TAE-VLV-KIPN----PGNIKRNA-DGHFWVSSSEELDGN-M------HGRVDPKGIKFDEFGNIL----------EVIP 276 (322)
T ss_dssp CEE-EEE-ECSS----EEEEEECT-TSCEEEEEEEETTSS-T------TSCEEEEEEEECTTSCEE----------EEEE
T ss_pred ccc-eEE-eCCC----CCCeEECC-CCCEEEEecCccccc-c------cCCCccEEEEECCCCCEE----------EEEE
Confidence 223 332 2332 44599999 999999986522110 1 112357899999987310 1122
Q ss_pred CCCCCCCCCCCCCCCeEEEeccccceeeeecCCCCCeeEEEeccCCCceeEE
Q 006811 372 IPKDNPFSEDSGLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 423 (630)
Q Consensus 372 IP~DNPF~~~~~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn 423 (630)
.|...+ ++.|..++++ .+ +||+++...+..-.++
T Consensus 277 ~~~g~~---------------~~~~~~~~~~--~g-~L~v~~~~~~~i~~~~ 310 (322)
T 2fp8_A 277 LPPPFA---------------GEHFEQIQEH--DG-LLYIGTLFHGSVGILV 310 (322)
T ss_dssp CCTTTT---------------TSCCCEEEEE--TT-EEEEECSSCSEEEEEE
T ss_pred CCCCCc---------------cccceEEEEe--CC-EEEEeecCCCceEEEe
Confidence 221110 5667777774 34 6999987775443333
No 51
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.09 E-value=0.0092 Score=60.30 Aligned_cols=81 Identities=11% Similarity=0.107 Sum_probs=51.6
Q ss_pred ceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCe
Q 006811 308 GGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPE 387 (630)
Q Consensus 308 GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pE 387 (630)
-..|.+++.||.|||+..........+...-......|.|+|+|+++. ..+
T Consensus 128 p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~-----------------------------~~~ 178 (322)
T 2fp8_A 128 LYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK-----------------------------ETT 178 (322)
T ss_dssp EEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT-----------------------------EEE
T ss_pred cceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC-----------------------------EEE
Confidence 345888875799999874421100000000001234589999998751 225
Q ss_pred EEEeccccceeeeecCCCCCeeEEEeccCCC
Q 006811 388 IWALGLRNPWRCSFDSDRPSYFMCADVGQDV 418 (630)
Q Consensus 388 I~A~GlRNP~r~afD~~~g~~l~~~DvG~d~ 418 (630)
+++-++..|.+++|++... .||++|.+.+.
T Consensus 179 ~~~~~~~~p~gia~~~dg~-~lyv~d~~~~~ 208 (322)
T 2fp8_A 179 LLLKELHVPGGAEVSADSS-FVLVAEFLSHQ 208 (322)
T ss_dssp EEEEEESCCCEEEECTTSS-EEEEEEGGGTE
T ss_pred EeccCCccCcceEECCCCC-EEEEEeCCCCe
Confidence 6777899999999999743 69999987643
No 52
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.00 E-value=0.052 Score=54.96 Aligned_cols=167 Identities=11% Similarity=0.125 Sum_probs=93.3
Q ss_pred eeEEEcC-CCCceEEEEec--CceEEEEEccCCCCCceeeecCCCCCcCCccc--eeeCCCCceeeeeeCCCCCCCCEEE
Q 006811 151 LNMVAHP-DGSNRAFFSNQ--EGKIWLATIPEQGLGETMELDASSPFADLTDE--VHFDTEFGLMGMAFHPNFAKNGRFF 225 (630)
Q Consensus 151 ~~ma~~p-DGs~RlfV~eq--~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~--V~~~~e~GLLGiAfhPdF~~Ng~~Y 225 (630)
..+++.| +| ++||++. .++|++++ + +| +.+.. +-..... ..........|||++|+ +|.+|
T Consensus 146 ~~ia~~~~~g--~lyv~d~~~~~~I~~~~-~-~g--~~~~~-----~~~~g~~~~~~~~~~~~p~gia~d~~---~g~l~ 211 (329)
T 3fvz_A 146 TDVAVEPSTG--AVFVSDGYCNSRIVQFS-P-SG--KFVTQ-----WGEESSGSSPRPGQFSVPHSLALVPH---LDQLC 211 (329)
T ss_dssp EEEEECTTTC--CEEEEECSSCCEEEEEC-T-TS--CEEEE-----ECEECCSSSCCTTEESCEEEEEEETT---TTEEE
T ss_pred cEEEEeCCCC--eEEEEeCCCCCeEEEEc-C-CC--CEEEE-----eccCCCCCCCCCcccCCCcEEEEECC---CCEEE
Confidence 7899999 67 7999993 78999886 3 23 22210 0000000 00001123689999973 58999
Q ss_pred EEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCCCC
Q 006811 226 ASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNG 305 (630)
Q Consensus 226 vsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~~~ 305 (630)
|+-... .+|.+|..+.. +.... +..+...
T Consensus 212 v~d~~~------------------------------------~~I~~~~~~~G-------------~~~~~--~~~~~~~ 240 (329)
T 3fvz_A 212 VADREN------------------------------------GRIQCFKTDTK-------------EFVRE--IKHASFG 240 (329)
T ss_dssp EEETTT------------------------------------TEEEEEETTTC-------------CEEEE--ECCTTTT
T ss_pred EEECCC------------------------------------CEEEEEECCCC-------------cEEEE--EeccccC
Confidence 864311 27777875311 11112 2222211
Q ss_pred ccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCC
Q 006811 306 HHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQ 385 (630)
Q Consensus 306 H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~ 385 (630)
..--.+.|.| |.+|..-|...-. | ....+|..++..... .
T Consensus 241 ~~~~~~~~~p--g~~~~~~g~~~v~-~---------~~~~~v~~~~~~~g~----------------------------~ 280 (329)
T 3fvz_A 241 RNVFAISYIP--GFLFAVNGKPYFG-D---------QEPVQGFVMNFSSGE----------------------------I 280 (329)
T ss_dssp TCEEEEEEET--TEEEEEECCCCTT-C---------SCCCCEEEEETTTCC----------------------------E
T ss_pred CCcceeeecC--CEEEEeCCCEEec-c---------CCCcEEEEEEcCCCe----------------------------E
Confidence 2223588888 8999987763221 1 123457777744310 0
Q ss_pred CeEE---EeccccceeeeecCCCCCeeEEEeccCCCceeEEE
Q 006811 386 PEIW---ALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDI 424 (630)
Q Consensus 386 pEI~---A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn~ 424 (630)
-..+ .-.+..|+++++|+. | .||++|.+.+..-.+++
T Consensus 281 ~~~~~~~~~~~~~p~~ia~~~d-G-~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 281 IDVFKPVRKHFDMPHDIVASED-G-TVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp EEEECCSSSCCSSEEEEEECTT-S-EEEEEESSSCCEEEEEE
T ss_pred EEEEcCCCCccCCeeEEEECCC-C-CEEEEECCCCEEEEEeC
Confidence 0111 135678999999996 4 69999998876544443
No 53
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.85 E-value=0.031 Score=54.84 Aligned_cols=63 Identities=10% Similarity=0.094 Sum_probs=44.6
Q ss_pred ceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecC-CCCchhhhhhcccCCCccCCCCCCCCCCCCCCC
Q 006811 308 GGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVD-NIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQP 386 (630)
Q Consensus 308 GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvD-g~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~p 386 (630)
-..|.+++ ||.|||+... .+.|.|+|++ +. .-
T Consensus 228 p~~i~~d~-~G~l~v~~~~-----------------~~~i~~~d~~~g~-----------------------------~~ 260 (314)
T 1pjx_A 228 ADGMDFDE-DNNLLVANWG-----------------SSHIEVFGPDGGQ-----------------------------PK 260 (314)
T ss_dssp EEEEEEBT-TCCEEEEEET-----------------TTEEEEECTTCBS-----------------------------CS
T ss_pred CCceEECC-CCCEEEEEcC-----------------CCEEEEEcCCCCc-----------------------------Ee
Confidence 34699999 9999998743 1468999887 41 11
Q ss_pred eEEEeccccceeeeecCCCCCeeEEEeccCCC
Q 006811 387 EIWALGLRNPWRCSFDSDRPSYFMCADVGQDV 418 (630)
Q Consensus 387 EI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~ 418 (630)
+.+..+...|..++|++.. .+||+++.+.+.
T Consensus 261 ~~~~~~~~~~~~i~~~~dg-~~l~v~~~~~~~ 291 (314)
T 1pjx_A 261 MRIRCPFEKPSNLHFKPQT-KTIFVTEHENNA 291 (314)
T ss_dssp EEEECSSSCEEEEEECTTS-SEEEEEETTTTE
T ss_pred EEEeCCCCCceeEEECCCC-CEEEEEeCCCCe
Confidence 3344555788999998864 359999876543
No 54
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.84 E-value=0.093 Score=51.96 Aligned_cols=59 Identities=12% Similarity=0.293 Sum_probs=39.2
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceee---CCCCceeeeeeCCCCCCCCEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHF---DTEFGLMGMAFHPNFAKNGRFFAS 227 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~---~~e~GLLGiAfhPdF~~Ng~~Yvs 227 (630)
..+++.|||. ++|++...|.|++++. .. ++.+. .+.. ..+....+++|+|+ .+++|+.
T Consensus 188 ~~~~~s~dg~-~l~~~~~~~~i~~~d~-~~--~~~~~------------~~~~~~~~~~~~~~~~~~s~d---g~~l~~~ 248 (353)
T 3vgz_A 188 TGLALDSEGK-RLYTTNADGELITIDT-AD--NKILS------------RKKLLDDGKEHFFINISLDTA---RQRAFIT 248 (353)
T ss_dssp CCCEEETTTT-EEEEECTTSEEEEEET-TT--TEEEE------------EEECCCSSSCCCEEEEEEETT---TTEEEEE
T ss_pred ceEEECCCCC-EEEEEcCCCeEEEEEC-CC--CeEEE------------EEEcCCCCCCcccceEEECCC---CCEEEEE
Confidence 6789999996 7999999999999874 22 22221 1111 12344678999984 5567775
Q ss_pred E
Q 006811 228 F 228 (630)
Q Consensus 228 Y 228 (630)
-
T Consensus 249 ~ 249 (353)
T 3vgz_A 249 D 249 (353)
T ss_dssp E
T ss_pred e
Confidence 4
No 55
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.82 E-value=0.086 Score=52.20 Aligned_cols=57 Identities=18% Similarity=0.285 Sum_probs=35.8
Q ss_pred eeEEEcCCCCceEEEEec--CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQ--EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 227 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq--~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Yvs 227 (630)
..++++|||. ++|++.. .+.|++++. +. ++.+. .+ ........+++|+|+ ..++|+.
T Consensus 144 ~~~~~s~dg~-~l~~~~~~~~~~i~~~d~-~~--~~~~~------------~~-~~~~~~~~~~~~s~d---g~~l~~~ 202 (353)
T 3vgz_A 144 RELVADDATN-TVYISGIGKESVIWVVDG-GN--IKLKT------------AI-QNTGKMSTGLALDSE---GKRLYTT 202 (353)
T ss_dssp EEEEEETTTT-EEEEEEESSSCEEEEEET-TT--TEEEE------------EE-CCCCTTCCCCEEETT---TTEEEEE
T ss_pred ceEEECCCCC-EEEEEecCCCceEEEEcC-CC--CceEE------------Ee-cCCCCccceEEECCC---CCEEEEE
Confidence 5689999996 7999983 788999874 22 22211 11 111233678899884 4567764
No 56
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.81 E-value=0.071 Score=53.45 Aligned_cols=60 Identities=18% Similarity=0.333 Sum_probs=36.7
Q ss_pred eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 227 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Yvs 227 (630)
..+++.||| ++|++.. .++|+++++..+|. ...+ ..+......+..+++|+|+ ..++|+.
T Consensus 144 ~~~~~spdg--~l~v~~~~~~~v~~~~~~~~g~--~~~~----------~~~~~~~g~~p~~~~~spd---g~~l~v~ 204 (347)
T 3hfq_A 144 HYTDLTPDN--RLAVIDLGSDKVYVYNVSDAGQ--LSEQ----------SVLTMEAGFGPRHLVFSPD---GQYAFLA 204 (347)
T ss_dssp EEEEECTTS--CEEEEETTTTEEEEEEECTTSC--EEEE----------EEEECCTTCCEEEEEECTT---SSEEEEE
T ss_pred eEEEECCCC--cEEEEeCCCCEEEEEEECCCCc--EEEe----------eeEEcCCCCCCceEEECCC---CCEEEEE
Confidence 458999999 4999886 67899887632222 1100 1112223346778999984 2347764
No 57
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.79 E-value=0.037 Score=55.64 Aligned_cols=59 Identities=17% Similarity=0.232 Sum_probs=42.5
Q ss_pred eeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCeE
Q 006811 309 GQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEI 388 (630)
Q Consensus 309 G~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI 388 (630)
-.|.+++ ||.|||+.-. .++|.||+++|.. .++
T Consensus 215 ~gi~vd~-dG~l~va~~~-----------------~~~V~~~~~~G~~-----------------------------~~~ 247 (306)
T 2p4o_A 215 DDFAFDV-EGNLYGATHI-----------------YNSVVRIAPDRST-----------------------------TII 247 (306)
T ss_dssp SSEEEBT-TCCEEEECBT-----------------TCCEEEECTTCCE-----------------------------EEE
T ss_pred CCeEECC-CCCEEEEeCC-----------------CCeEEEECCCCCE-----------------------------EEE
Confidence 4599999 9999998753 2458999887720 011
Q ss_pred --EEeccccceeeeec---CCCCCeeEEEecc
Q 006811 389 --WALGLRNPWRCSFD---SDRPSYFMCADVG 415 (630)
Q Consensus 389 --~A~GlRNP~r~afD---~~~g~~l~~~DvG 415 (630)
+..+++.|..++|+ +.. ++||+++.+
T Consensus 248 ~~~~~~~~~p~~~a~~g~~~d~-~~LyVt~~~ 278 (306)
T 2p4o_A 248 AQAEQGVIGSTAVAFGQTEGDC-TAIYVVTNG 278 (306)
T ss_dssp ECGGGTCTTEEEEEECCSTTTT-TEEEEEECT
T ss_pred eecccccCCceEEEEecccCCC-CEEEEECCC
Confidence 23467889999998 553 479999986
No 58
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.66 E-value=0.14 Score=52.06 Aligned_cols=164 Identities=11% Similarity=0.097 Sum_probs=93.0
Q ss_pred CcEEEEEeeCce-eeEEEcCCCCceEEEEe-cCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCC----CCceeee
Q 006811 139 GLCLEKIGNGSY-LNMVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDT----EFGLMGM 212 (630)
Q Consensus 139 G~~le~va~Gl~-~~ma~~pDGs~RlfV~e-q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~----e~GLLGi 212 (630)
+=.+.++..+-. ..|++.+|| ++||+. ..+.|++++. +. ++.. ..+..+. .....+|
T Consensus 74 ~~~~~~i~~~~~p~~i~~~~~g--~lyv~~~~~~~v~~iD~-~t--~~~~------------~~i~~g~~~~~~~~p~~i 136 (328)
T 3dsm_A 74 FKEVGRITGFTSPRYIHFLSDE--KAYVTQIWDYRIFIINP-KT--YEIT------------GYIECPDMDMESGSTEQM 136 (328)
T ss_dssp CCEEEEEECCSSEEEEEEEETT--EEEEEEBSCSEEEEEET-TT--TEEE------------EEEECTTCCTTTCBCCCE
T ss_pred cEEEEEcCCCCCCcEEEEeCCC--eEEEEECCCCeEEEEEC-CC--CeEE------------EEEEcCCccccCCCcceE
Confidence 434455643333 888998998 899999 6899999873 32 2221 1111111 1256788
Q ss_pred eeCCCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCC
Q 006811 213 AFHPNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSE 292 (630)
Q Consensus 213 AfhPdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~ 292 (630)
++ .++++||.-... ...|..+..... +
T Consensus 137 ~~-----~~~~lyv~~~~~-----------------------------------~~~v~viD~~t~-------------~ 163 (328)
T 3dsm_A 137 VQ-----YGKYVYVNCWSY-----------------------------------QNRILKIDTETD-------------K 163 (328)
T ss_dssp EE-----ETTEEEEEECTT-----------------------------------CCEEEEEETTTT-------------E
T ss_pred EE-----ECCEEEEEcCCC-----------------------------------CCEEEEEECCCC-------------e
Confidence 88 378999973100 025666653211 1
Q ss_pred cEEEEEeccCCCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccC
Q 006811 293 VRRIFTMGLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSI 372 (630)
Q Consensus 293 ~~~Il~~~~P~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsI 372 (630)
+...+. .. .....|.|.| ||.||++.-... ...|+ .+ ..++|.+||.+.. .
T Consensus 164 ~~~~i~--~g---~~p~~i~~~~-dG~l~v~~~~~~-~~~~~--~~----~~~~v~~id~~t~---------------~- 214 (328)
T 3dsm_A 164 VVDELT--IG---IQPTSLVMDK-YNKMWTITDGGY-EGSPY--GY----EAPSLYRIDAETF---------------T- 214 (328)
T ss_dssp EEEEEE--CS---SCBCCCEECT-TSEEEEEBCCBC-TTCSS--CB----CCCEEEEEETTTT---------------E-
T ss_pred EEEEEE--cC---CCccceEEcC-CCCEEEEECCCc-cCCcc--cc----CCceEEEEECCCC---------------e-
Confidence 111122 11 1224699999 999999874321 11222 11 2588999998751 0
Q ss_pred CCCCCCCCCCCCCCeEEEec-cccceeeeecCCCCCeeEEEec
Q 006811 373 PKDNPFSEDSGLQPEIWALG-LRNPWRCSFDSDRPSYFMCADV 414 (630)
Q Consensus 373 P~DNPF~~~~~~~pEI~A~G-lRNP~r~afD~~~g~~l~~~Dv 414 (630)
..+.+..+ -..|.+++|++... +||+++.
T Consensus 215 ------------v~~~~~~~~g~~p~~la~~~d~~-~lyv~~~ 244 (328)
T 3dsm_A 215 ------------VEKQFKFKLGDWPSEVQLNGTRD-TLYWINN 244 (328)
T ss_dssp ------------EEEEEECCTTCCCEEEEECTTSC-EEEEESS
T ss_pred ------------EEEEEecCCCCCceeEEEecCCC-EEEEEcc
Confidence 01123331 14799999999754 7999864
No 59
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.66 E-value=0.084 Score=51.97 Aligned_cols=56 Identities=9% Similarity=-0.015 Sum_probs=37.1
Q ss_pred eeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCeEE
Q 006811 310 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 389 (630)
Q Consensus 310 ~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI~ 389 (630)
.|.|++ ||.||++. + +.|.|++++|. .-+.+
T Consensus 222 ~i~~d~-~G~l~v~~-~------------------~~v~~~~~~g~-----------------------------~~~~~ 252 (296)
T 3e5z_A 222 GLRVDA-GGLIWASA-G------------------DGVHVLTPDGD-----------------------------ELGRV 252 (296)
T ss_dssp SEEEBT-TSCEEEEE-T------------------TEEEEECTTSC-----------------------------EEEEE
T ss_pred eEEECC-CCCEEEEc-C------------------CeEEEECCCCC-----------------------------EEEEE
Confidence 599999 99999998 2 23788887762 11334
Q ss_pred EeccccceeeeecCCCCCeeEEEecc
Q 006811 390 ALGLRNPWRCSFDSDRPSYFMCADVG 415 (630)
Q Consensus 390 A~GlRNP~r~afD~~~g~~l~~~DvG 415 (630)
...-+ |..++|+..++..||++..+
T Consensus 253 ~~~~~-~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 253 LTPQT-TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp ECSSC-CCEEEEESTTSCEEEEEETT
T ss_pred ECCCC-ceeEEEECCCCCEEEEEcCC
Confidence 44445 77888853334468987653
No 60
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.65 E-value=0.14 Score=52.08 Aligned_cols=62 Identities=13% Similarity=0.162 Sum_probs=43.6
Q ss_pred eeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCeE
Q 006811 309 GQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEI 388 (630)
Q Consensus 309 G~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI 388 (630)
-.|.+++ ||.|||++-. .++|.|+++++. .-+.
T Consensus 233 ~gi~~d~-~G~lwva~~~-----------------~~~v~~~d~~g~-----------------------------~~~~ 265 (326)
T 2ghs_A 233 DGSVCDA-EGHIWNARWG-----------------EGAVDRYDTDGN-----------------------------HIAR 265 (326)
T ss_dssp EEEEECT-TSCEEEEEET-----------------TTEEEEECTTCC-----------------------------EEEE
T ss_pred CeeEECC-CCCEEEEEeC-----------------CCEEEEECCCCC-----------------------------EEEE
Confidence 4699999 9999998732 146889988662 1134
Q ss_pred EEeccccceeeeec-CCCCCeeEEEeccCCC
Q 006811 389 WALGLRNPWRCSFD-SDRPSYFMCADVGQDV 418 (630)
Q Consensus 389 ~A~GlRNP~r~afD-~~~g~~l~~~DvG~d~ 418 (630)
+....++|..++|+ +.. ++||++......
T Consensus 266 i~~~~~~~~~~af~g~d~-~~L~vt~~~~~~ 295 (326)
T 2ghs_A 266 YEVPGKQTTCPAFIGPDA-SRLLVTSAREHL 295 (326)
T ss_dssp EECSCSBEEEEEEESTTS-CEEEEEEBCTTC
T ss_pred EECCCCCcEEEEEecCCC-CEEEEEecCCCC
Confidence 55556778999998 553 479998876643
No 61
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.64 E-value=0.063 Score=56.16 Aligned_cols=66 Identities=23% Similarity=0.333 Sum_probs=48.2
Q ss_pred eeEEEcCCCCceEEEEec--------------CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCC
Q 006811 151 LNMVAHPDGSNRAFFSNQ--------------EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHP 216 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq--------------~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhP 216 (630)
-.|++.||| +|||+.- .|+|++++ ++ |+ +....||.. .++.+.+.|...||+|||
T Consensus 138 ~~l~~~pDG--~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~-~d-G~-----~p~~npf~~--~~i~a~G~rnp~Gla~d~ 206 (354)
T 3a9g_A 138 GRIRFGPDG--MLYITTGDAADPRLAQDLSSLAGKILRVD-EE-GR-----PPADNPFPN--SPIWSYGHRNPQGIDWHR 206 (354)
T ss_dssp CCEEECTTS--CEEEECCCTTCGGGGTCTTCCSSEEEEEC-TT-SC-----CCTTSSSTT--CCEEEECCSCCCEEEECT
T ss_pred ceEEECCCC--cEEEEECCCCCCccccCCCCCCeEEEEEc-CC-CC-----CCCCCCCCC--CcEEEEccCCcceEEEeC
Confidence 569999999 6999952 48999885 33 43 123566754 477888888899999998
Q ss_pred CCCCCCEEEEEEee
Q 006811 217 NFAKNGRFFASFNC 230 (630)
Q Consensus 217 dF~~Ng~~YvsYs~ 230 (630)
+ +|.+|+.-+.
T Consensus 207 ~---~g~l~v~d~g 217 (354)
T 3a9g_A 207 A---SGVMVATEHG 217 (354)
T ss_dssp T---TCCEEEEECC
T ss_pred C---CCCEEEEecC
Confidence 4 6889987653
No 62
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.54 E-value=0.13 Score=52.35 Aligned_cols=60 Identities=17% Similarity=0.289 Sum_probs=40.1
Q ss_pred cceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCC
Q 006811 307 HGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQP 386 (630)
Q Consensus 307 ~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~p 386 (630)
+...|.|.|.+++||++.+ +|.+||.++. .+. .-+|.
T Consensus 226 ~p~~la~~~d~~~lyv~~~--------------------~v~~~d~~t~---------------~~~-~~~~~------- 262 (328)
T 3dsm_A 226 WPSEVQLNGTRDTLYWINN--------------------DIWRMPVEAD---------------RVP-VRPFL------- 262 (328)
T ss_dssp CCEEEEECTTSCEEEEESS--------------------SEEEEETTCS---------------SCC-SSCSB-------
T ss_pred CceeEEEecCCCEEEEEcc--------------------EEEEEECCCC---------------cee-eeeee-------
Confidence 4567999993356888532 5899998752 110 11121
Q ss_pred eEEEeccccceeeeecCCCCCeeEEEe
Q 006811 387 EIWALGLRNPWRCSFDSDRPSYFMCAD 413 (630)
Q Consensus 387 EI~A~GlRNP~r~afD~~~g~~l~~~D 413 (630)
..+.+.|+++++||.++ +||+++
T Consensus 263 ---~~~~~~p~gi~vdp~~g-~lyva~ 285 (328)
T 3dsm_A 263 ---EFRDTKYYGLTVNPNNG-EVYVAD 285 (328)
T ss_dssp ---CCCSSCEEEEEECTTTC-CEEEEE
T ss_pred ---cCCCCceEEEEEcCCCC-eEEEEc
Confidence 12368899999999776 699998
No 63
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.54 E-value=0.076 Score=58.83 Aligned_cols=31 Identities=13% Similarity=0.187 Sum_probs=24.6
Q ss_pred ccccceeeeecCCCCCeeEEEeccCCCceeEE
Q 006811 392 GLRNPWRCSFDSDRPSYFMCADVGQDVYEEVD 423 (630)
Q Consensus 392 GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn 423 (630)
-|..|+++++|+.++ .||++|.+-+..-.|.
T Consensus 442 ~f~~P~gIavd~~~g-~lyVaD~~N~rIrki~ 472 (496)
T 3kya_A 442 RFRDVSGLVYDDVKE-MFYVHDQVGHTIRTIS 472 (496)
T ss_dssp CCSSEEEEEEETTTT-EEEEEETTTTEEEEEE
T ss_pred hcCCCcEEEEECCCC-EEEEEeCCCCEEEEEE
Confidence 378999999999766 6999999987644443
No 64
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.51 E-value=0.16 Score=51.64 Aligned_cols=64 Identities=13% Similarity=0.074 Sum_probs=44.3
Q ss_pred eeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCeE
Q 006811 309 GQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEI 388 (630)
Q Consensus 309 G~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI 388 (630)
..+.++| ||.||+++-+.. .....++|+|++ ++. .+.
T Consensus 137 ~~i~~d~-~G~l~v~~~~~~-----------~~~~~~~l~~~~-~g~------------------------------~~~ 173 (326)
T 2ghs_A 137 NDGRMHP-SGALWIGTMGRK-----------AETGAGSIYHVA-KGK------------------------------VTK 173 (326)
T ss_dssp EEEEECT-TSCEEEEEEETT-----------CCTTCEEEEEEE-TTE------------------------------EEE
T ss_pred CCEEECC-CCCEEEEeCCCc-----------CCCCceEEEEEe-CCc------------------------------EEE
Confidence 4689999 999999764211 123568899999 651 123
Q ss_pred EEeccccceeeeecCCCCCeeEEEeccC
Q 006811 389 WALGLRNPWRCSFDSDRPSYFMCADVGQ 416 (630)
Q Consensus 389 ~A~GlRNP~r~afD~~~g~~l~~~DvG~ 416 (630)
+..++..|.+++|++.. ..||++|...
T Consensus 174 ~~~~~~~~~~i~~s~dg-~~lyv~~~~~ 200 (326)
T 2ghs_A 174 LFADISIPNSICFSPDG-TTGYFVDTKV 200 (326)
T ss_dssp EEEEESSEEEEEECTTS-CEEEEEETTT
T ss_pred eeCCCcccCCeEEcCCC-CEEEEEECCC
Confidence 34466678899999875 4689988654
No 65
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.39 E-value=0.061 Score=53.75 Aligned_cols=54 Identities=13% Similarity=0.198 Sum_probs=35.5
Q ss_pred eeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCeEE
Q 006811 310 QLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEIW 389 (630)
Q Consensus 310 ~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI~ 389 (630)
.|.+++ ||.||+++++ .|.+++++|.. -+.+
T Consensus 243 gi~~d~-~G~lwv~~~~-------------------gv~~~~~~g~~-----------------------------~~~~ 273 (305)
T 3dr2_A 243 GFCVDR-GGWLWSSSGT-------------------GVCVFDSDGQL-----------------------------LGHI 273 (305)
T ss_dssp SEEECT-TSCEEECCSS-------------------EEEEECTTSCE-----------------------------EEEE
T ss_pred eEEECC-CCCEEEecCC-------------------cEEEECCCCCE-----------------------------EEEE
Confidence 589999 9999998632 28888887731 1222
Q ss_pred EeccccceeeeecCCCCCeeEEEec
Q 006811 390 ALGLRNPWRCSFDSDRPSYFMCADV 414 (630)
Q Consensus 390 A~GlRNP~r~afD~~~g~~l~~~Dv 414 (630)
...- +|..++|++.. .+||++-.
T Consensus 274 ~~~~-~~~~~~f~~d~-~~L~it~~ 296 (305)
T 3dr2_A 274 PTPG-TASNCTFDQAQ-QRLFITGG 296 (305)
T ss_dssp ECSS-CCCEEEECTTS-CEEEEEET
T ss_pred ECCC-ceeEEEEeCCC-CEEEEEcC
Confidence 2222 46778888654 37898764
No 66
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.38 E-value=0.041 Score=58.15 Aligned_cols=64 Identities=27% Similarity=0.323 Sum_probs=49.1
Q ss_pred eeEEEcCCCCceEEEEe--------------cCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCC
Q 006811 151 LNMVAHPDGSNRAFFSN--------------QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHP 216 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~e--------------q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhP 216 (630)
-.|+|.||| .|||+. ..|+|++++ ++ |+ +....||.+. +|++.+.|...||||||
T Consensus 143 ~~l~fgpDG--~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~-~d-G~-----ip~~nPf~~~--~i~a~G~RNp~Gla~dp 211 (347)
T 3das_A 143 GRIAFGPDK--MLYAGTGESGDTGLSQDRKSLGGKILRMT-PD-GE-----PAPGNPFPGS--PVYSYGHRNVQGLAWDD 211 (347)
T ss_dssp CCEEECTTS--CEEEECBCTTCGGGTTCTTCSTTCEEEEC-TT-SS-----BCTTCSSTTC--CEEEBCCSBCCEEEECT
T ss_pred ccccCCCCC--CEEEEECCCCCCccccCCCCCCCEEEEEe-CC-CC-----ccCCCCCCCC--eEEeeCCCCcceEEECC
Confidence 459999999 699994 369999986 33 43 2246788763 78888999999999998
Q ss_pred CCCCCCEEEEEEe
Q 006811 217 NFAKNGRFFASFN 229 (630)
Q Consensus 217 dF~~Ng~~YvsYs 229 (630)
+|.+|+.-.
T Consensus 212 ----~G~L~~~d~ 220 (347)
T 3das_A 212 ----KQRLFASEF 220 (347)
T ss_dssp ----TCCEEEEEC
T ss_pred ----CCCEEEEec
Confidence 377887665
No 67
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.38 E-value=0.15 Score=50.63 Aligned_cols=24 Identities=21% Similarity=0.458 Sum_probs=19.4
Q ss_pred eeEEEcCCCCceEEEEec-------CceEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQ-------EGKIWLAT 176 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq-------~G~V~~~~ 176 (630)
..+++.||| ++||+.. .+.||+++
T Consensus 138 ~~i~~d~~g--~l~v~~~~~~~~~~~~~l~~~~ 168 (333)
T 2dg1_A 138 DDMVFDSKG--GFYFTDFRGYSTNPLGGVYYVS 168 (333)
T ss_dssp EEEEECTTS--CEEEEECCCBTTBCCEEEEEEC
T ss_pred cceEECCCC--CEEEEeccccccCCCceEEEEe
Confidence 678999998 7999876 37888875
No 68
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.36 E-value=0.37 Score=47.12 Aligned_cols=63 Identities=22% Similarity=0.329 Sum_probs=38.6
Q ss_pred eeEEEcCCCCceEEEEe-cCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 227 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~e-q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Yvs 227 (630)
..+++.|||. ++|++. ..|.|+++++..++. ...+ . ..........+..+++|+|+ ..++|+.
T Consensus 132 ~~~~~s~dg~-~l~~~~~~~~~v~~~d~~~~~~--~~~~------~--~~~~~~~~~~~~~~~~~~pd---g~~l~~~ 195 (343)
T 1ri6_A 132 HSANISPDNR-TLWVPALKQDRICLFTVSDDGH--LVAQ------D--PAEVTTVEGAGPRHMVFHPN---EQYAYCV 195 (343)
T ss_dssp CCCEECTTSS-EEEEEEGGGTEEEEEEECTTSC--EEEE------E--EEEEECSTTCCEEEEEECTT---SSEEEEE
T ss_pred eEEEECCCCC-EEEEecCCCCEEEEEEecCCCc--eeee------c--ccccccCCCCCcceEEECCC---CCEEEEE
Confidence 6789999995 689998 789999987633232 1100 0 00111222346778999985 3457664
No 69
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.32 E-value=0.012 Score=67.52 Aligned_cols=63 Identities=16% Similarity=0.261 Sum_probs=43.7
Q ss_pred cceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCC
Q 006811 307 HGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQP 386 (630)
Q Consensus 307 ~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~p 386 (630)
.-..|+|+|..++|||+-.. .++|.+++.||. ..
T Consensus 541 ~PnGlavd~~~~~LY~aD~~-----------------~~~I~~~d~dG~-----------------------------~~ 574 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSK-----------------LHSISSIDVNGG-----------------------------NR 574 (699)
T ss_dssp SCCCEEECTTTCCEEEEETT-----------------TTEEEEECSSSS-----------------------------CC
T ss_pred CccEEEEeccCCEEEEEecC-----------------CCeEEEEccCCC-----------------------------ce
Confidence 34569999845899997532 256999999872 11
Q ss_pred eEEE---eccccceeeeecCCCCCeeEEEeccCCC
Q 006811 387 EIWA---LGLRNPWRCSFDSDRPSYFMCADVGQDV 418 (630)
Q Consensus 387 EI~A---~GlRNP~r~afD~~~g~~l~~~DvG~d~ 418 (630)
+++. -.+.+|.++++|.. +||++|.+.+.
T Consensus 575 ~~~~~~~~~~~~P~glavd~~---~lywtd~~~~~ 606 (699)
T 1n7d_A 575 KTILEDEKRLAHPFSLAVFED---KVFWTDIINEA 606 (699)
T ss_dssp EEECCCSSSCSSCCCCEEETT---EEEEECSTTTC
T ss_pred EEEEecCCcCCCceEeEEECC---EEEEEeCCCCe
Confidence 2222 24689999999874 59999966543
No 70
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.30 E-value=0.51 Score=47.50 Aligned_cols=66 Identities=12% Similarity=0.124 Sum_probs=37.7
Q ss_pred eeEEEcCCCCceEEEEec-CceEEEEEccCCCCC----ceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLG----ETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFF 225 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg----~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Y 225 (630)
..++++|||. ++|++.. .+.|+++.+... .+ +.+.. .............+..+++|+|+ ..++|
T Consensus 158 ~~~~~spdg~-~l~~~~~~~~~v~v~~~~~~-~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~spd---g~~l~ 226 (361)
T 3scy_A 158 HCVRITPDGK-YLLADDLGTDQIHKFNINPN-ANADNKEKFLT------KGTPEAFKVAPGSGPRHLIFNSD---GKFAY 226 (361)
T ss_dssp EEEEECTTSS-EEEEEETTTTEEEEEEECTT-CCTTTCCCCEE------EEEEEEEECCTTCCEEEEEECTT---SSEEE
T ss_pred eEEEECCCCC-EEEEEeCCCCEEEEEEEcCC-CCcccccceee------cccccceecCCCCCCeEEEEcCC---CCEEE
Confidence 4589999995 6888886 688988875322 11 10100 00001122234566789999984 23566
Q ss_pred EE
Q 006811 226 AS 227 (630)
Q Consensus 226 vs 227 (630)
+.
T Consensus 227 v~ 228 (361)
T 3scy_A 227 LI 228 (361)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 71
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.23 E-value=0.35 Score=48.28 Aligned_cols=30 Identities=13% Similarity=0.225 Sum_probs=23.4
Q ss_pred eeEEEcCCCCceEEEEe-cCceEEEEEccCCC
Q 006811 151 LNMVAHPDGSNRAFFSN-QEGKIWLATIPEQG 181 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~e-q~G~V~~~~~p~~g 181 (630)
..+++.|||. +||++. ..|.|.++++..+|
T Consensus 89 ~~~a~spdg~-~l~~~~~~~~~v~v~~~~~~g 119 (347)
T 3hfq_A 89 AYVAVDEARQ-LVYSANYHKGTAEVMKIAADG 119 (347)
T ss_dssp SEEEEETTTT-EEEEEETTTTEEEEEEECTTS
T ss_pred EEEEECCCCC-EEEEEeCCCCEEEEEEeCCCC
Confidence 6799999995 688888 57889888764333
No 72
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.22 E-value=0.044 Score=55.13 Aligned_cols=121 Identities=15% Similarity=0.186 Sum_probs=70.8
Q ss_pred cCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEeecCCC
Q 006811 156 HPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFNCDKVK 234 (630)
Q Consensus 156 ~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs~~~~~ 234 (630)
.|||. +|||++. .++|+++++..+|. +. . .++... ....-||+++| +|.+||.-...
T Consensus 175 s~dg~-~lyv~d~~~~~I~~~~~~~~g~---~~--~--------~~~~~~-~~~P~gi~vd~----dG~l~va~~~~--- 232 (306)
T 2p4o_A 175 KRFGN-FLYVSNTEKMLLLRIPVDSTDK---PG--E--------PEIFVE-QTNIDDFAFDV----EGNLYGATHIY--- 232 (306)
T ss_dssp EEETT-EEEEEETTTTEEEEEEBCTTSC---BC--C--------CEEEEE-SCCCSSEEEBT----TCCEEEECBTT---
T ss_pred CcCCC-EEEEEeCCCCEEEEEEeCCCCC---CC--c--------cEEEec-cCCCCCeEECC----CCCEEEEeCCC---
Confidence 77874 7999997 58899987532121 10 0 122221 14578899997 58888864311
Q ss_pred CCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCCCCccceeeEEc
Q 006811 235 WPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGHHGGQLLFG 314 (630)
Q Consensus 235 ~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~~~H~GG~L~FG 314 (630)
.+|.+|..++ +..++..+..| ...-..+.|+
T Consensus 233 ---------------------------------~~V~~~~~~G--------------~~~~~~~~~~~--~~~p~~~a~~ 263 (306)
T 2p4o_A 233 ---------------------------------NSVVRIAPDR--------------STTIIAQAEQG--VIGSTAVAFG 263 (306)
T ss_dssp ---------------------------------CCEEEECTTC--------------CEEEEECGGGT--CTTEEEEEEC
T ss_pred ---------------------------------CeEEEECCCC--------------CEEEEeecccc--cCCceEEEEe
Confidence 2566664211 22223222222 3445679998
Q ss_pred ---CCC-CeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCC
Q 006811 315 ---PTD-GYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDN 354 (630)
Q Consensus 315 ---p~D-G~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg 354 (630)
| | +.|||+...+.. .+ .+.....|+|+||++..
T Consensus 264 g~~~-d~~~LyVt~~~~~~--~~----~~~~~~~g~v~~i~~~~ 300 (306)
T 2p4o_A 264 QTEG-DCTAIYVVTNGGMF--LP----PPTGVVPANVVRLEVGK 300 (306)
T ss_dssp CSTT-TTTEEEEEECTTSS--SC----CTTCCCCEEEEEEECSS
T ss_pred cccC-CCCEEEEECCCCcc--cC----CCcccccceEEEEecCC
Confidence 8 7 689999985322 11 22346789999998754
No 73
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.10 E-value=0.41 Score=47.13 Aligned_cols=74 Identities=14% Similarity=0.220 Sum_probs=44.8
Q ss_pred CcEEEEEeeCce-eeEEEcCCCCceEEEEecC-ce-EEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeC
Q 006811 139 GLCLEKIGNGSY-LNMVAHPDGSNRAFFSNQE-GK-IWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFH 215 (630)
Q Consensus 139 G~~le~va~Gl~-~~ma~~pDGs~RlfV~eq~-G~-V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfh 215 (630)
+-.+..+..+-. ..++++|||. ++|++... +. |+++++..++ ... +....+ .....+..+++|+
T Consensus 118 ~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~i~~~~~~~~g--~~~---------~~~~~~-~~~~~~~~~~~~s 184 (331)
T 3u4y_A 118 NKFISTIPIPYDAVGIAISPNGN-GLILIDRSSANTVRRFKIDADG--VLF---------DTGQEF-ISGGTRPFNITFT 184 (331)
T ss_dssp TEEEEEEECCTTEEEEEECTTSS-CEEEEEETTTTEEEEEEECTTC--CEE---------EEEEEE-ECSSSSEEEEEEC
T ss_pred CCeEEEEECCCCccceEECCCCC-EEEEEecCCCceEEEEEECCCC--cEe---------ecCCcc-ccCCCCccceEEC
Confidence 444555554444 7899999995 69999874 77 8888764322 111 111111 1334567899999
Q ss_pred CCCCCCCEEEEEE
Q 006811 216 PNFAKNGRFFASF 228 (630)
Q Consensus 216 PdF~~Ng~~YvsY 228 (630)
|+ ..++|+.-
T Consensus 185 pd---g~~l~v~~ 194 (331)
T 3u4y_A 185 PD---GNFAFVAN 194 (331)
T ss_dssp TT---SSEEEEEE
T ss_pred CC---CCEEEEEe
Confidence 85 33577754
No 74
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.03 E-value=0.017 Score=57.98 Aligned_cols=71 Identities=20% Similarity=0.229 Sum_probs=49.7
Q ss_pred EEEEEee-Cce--eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 141 CLEKIGN-GSY--LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 141 ~le~va~-Gl~--~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
++.++.. |+. ..|+|+||| +||.+ ..|++|..+.+ .+. ...++.....|-..+..|+..+.|||
T Consensus 31 ~a~~iG~~gw~~~~~laf~P~G--~LYaV-~~G~Ly~~~~~-t~~--------~~~W~~s~t~IG~~Gw~~F~a~~fD~- 97 (236)
T 1tl2_A 31 RATLIGKGGWSNFKFLFLSPGG--ELYGV-LNDKIYKGTPP-THD--------NDNWMGRAKKIGNGGWNQFQFLFFDP- 97 (236)
T ss_dssp HSEEEESSSCTTCSEEEECTTS--CEEEE-ETTEEEEESCC-CST--------TCCHHHHCEEEECSCGGGCSEEEECT-
T ss_pred hccccCccccccceeEEECCCc--cEEEE-eCCeEEEECCC-CCC--------cccccccccEecccccccceEEEECC-
Confidence 5566665 444 689999999 79999 99999987632 221 22333332344445677789999997
Q ss_pred CCCCCEEEEE
Q 006811 218 FAKNGRFFAS 227 (630)
Q Consensus 218 F~~Ng~~Yvs 227 (630)
||.||+.
T Consensus 98 ---~G~LYav 104 (236)
T 1tl2_A 98 ---NGYLYAV 104 (236)
T ss_dssp ---TSCEEEE
T ss_pred ---CCCEEEe
Confidence 8999998
No 75
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=95.96 E-value=0.48 Score=48.31 Aligned_cols=61 Identities=20% Similarity=0.261 Sum_probs=38.4
Q ss_pred eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeC-CCCceeeeeeCCCCCCCCEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFD-TEFGLMGMAFHPNFAKNGRFFAS 227 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~-~e~GLLGiAfhPdF~~Ng~~Yvs 227 (630)
..+++.|||. ++|+++. .+.|+++++..+| +...+ ..+... ...+..+++|+|+ ..++|+.
T Consensus 148 ~~~~~spdG~-~l~~~~~~~~~v~~~~~~~~g--~~~~~----------~~~~~~~~g~~p~~~~~spd---g~~l~v~ 210 (365)
T 1jof_A 148 HGMVFDPTET-YLYSADLTANKLWTHRKLASG--EVELV----------GSVDAPDPGDHPRWVAMHPT---GNYLYAL 210 (365)
T ss_dssp EEEEECTTSS-EEEEEETTTTEEEEEEECTTS--CEEEE----------EEEECSSTTCCEEEEEECTT---SSEEEEE
T ss_pred eEEEECCCCC-EEEEEcCCCCEEEEEEECCCC--CEEEe----------eeEecCCCCCCCCEeEECCC---CCEEEEE
Confidence 7899999995 6888886 5799998753122 21100 011111 2467899999985 3367765
No 76
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.95 E-value=0.19 Score=52.97 Aligned_cols=68 Identities=18% Similarity=0.142 Sum_probs=45.0
Q ss_pred ceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCC-eeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCC
Q 006811 308 GGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLL-GKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQP 386 (630)
Q Consensus 308 GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~-GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~p 386 (630)
...|+.++ +|..||+-- .. ++|+|+++||+. .
T Consensus 139 ~nDvavD~-~GnaYVt~s-----------------~~~~~I~rV~pdG~~-----------------------------~ 171 (334)
T 2p9w_A 139 VVQSAQDR-DGNSYVAFA-----------------LGMPAIARVSADGKT-----------------------------V 171 (334)
T ss_dssp EEEEEECT-TSCEEEEEE-----------------ESSCEEEEECTTSCC-----------------------------E
T ss_pred CceeEECC-CCCEEEeCC-----------------CCCCeEEEEeCCCCE-----------------------------E
Confidence 44799999 999999721 22 779999999941 1
Q ss_pred eEEEecc------ccceeeeecCCCCCeeEEEeccCCCceeEEE
Q 006811 387 EIWALGL------RNPWRCSFDSDRPSYFMCADVGQDVYEEVDI 424 (630)
Q Consensus 387 EI~A~Gl------RNP~r~afD~~~g~~l~~~DvG~d~~EEIn~ 424 (630)
.+|..-. ..+-|++++|... .|++.|. ....-.+++
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~pdg~-~Liv~~~-~g~L~~fD~ 213 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFDPHSN-KLIAFGG-PRALTAFDV 213 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEETTTT-EEEEESS-SSSEEEEEC
T ss_pred eeeeecCCCcccccCcceEEEeCCCC-EEEEEcC-CCeEEEEcC
Confidence 2232222 2355999999754 6888887 444455553
No 77
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=95.85 E-value=0.066 Score=54.76 Aligned_cols=136 Identities=14% Similarity=0.145 Sum_probs=79.4
Q ss_pred eeEEEcCCCCceEEEEecCc-eEEEEEcc--CCCCCceeeecCCCCCcCCccceeeCCCC-ceeeeeeCCCCCCCCEEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQEG-KIWLATIP--EQGLGETMELDASSPFADLTDEVHFDTEF-GLMGMAFHPNFAKNGRFFA 226 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G-~V~~~~~p--~~gsg~~l~~~~~~pflDi~~~V~~~~e~-GLLGiAfhPdF~~Ng~~Yv 226 (630)
-+|++.|||. +||+++..| +||.++.. .++. +. ..+.+. .+...++. ..-|||++| +|.+|+
T Consensus 198 ~gia~s~dg~-~ly~~~~~~~~l~~~~~~~~~~~~---~~--~~~~~~----~~~~~g~~g~pdgia~d~----~G~l~v 263 (343)
T 2qe8_A 198 NGIVLDAENE-WLYLSPMHSTSMYRIKSADLSNLQ---LT--DAELGS----KIERYSEKPICDGISIDK----DHNIYV 263 (343)
T ss_dssp EEEEECTTSC-EEEEEESSCSEEEEEEHHHHTCTT---CC--HHHHHT----TCEEEEECCSCSCEEECT----TCCEEE
T ss_pred ceeEeccCCC-EEEEEeCCCCeEEEEEHHHhcCCC---CC--hhhhhc----ceEecccCCCCceEEECC----CCCEEE
Confidence 4699999995 799999866 88887521 0110 00 000011 11111223 356899997 588998
Q ss_pred EEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCCCCc
Q 006811 227 SFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNGH 306 (630)
Q Consensus 227 sYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~~~H 306 (630)
.-... .+|.+|.... .+.+++.. .| ...
T Consensus 264 a~~~~------------------------------------~~V~~~d~~~-------------G~~~~~~~--~~-~~~ 291 (343)
T 2qe8_A 264 GDLAH------------------------------------SAIGVITSAD-------------RAYKLLVT--DE-KLS 291 (343)
T ss_dssp EEGGG------------------------------------TEEEEEETTT-------------TEEEEEEE--CG-GGS
T ss_pred EccCC------------------------------------CeEEEEECCC-------------CCEEEEEE--CC-cee
Confidence 75421 2777886411 12344443 22 223
Q ss_pred cceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCC
Q 006811 307 HGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDN 354 (630)
Q Consensus 307 ~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg 354 (630)
+--.|.|++ ||.|||+....... -.|+...++....+.|+|++++.
T Consensus 292 ~p~~va~~~-~g~l~v~~~~~~~~-~~f~~~~~~~~~~~~i~~~~~~~ 337 (343)
T 2qe8_A 292 WTDSFNFGS-DGYLYFDCNQLHHS-APLNAGENISAPPYYIFRLKPLA 337 (343)
T ss_dssp CEEEEEECT-TSCEEEEECCGGGS-GGGBTTCCCCCSCEEEEEECCSS
T ss_pred cCCeeEECC-CCcEEEEeCccccc-cccccCCCcCcCCeEEEEEECCC
Confidence 456799999 99999998764221 12333455666678999998764
No 78
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.18 E-value=1.3 Score=43.56 Aligned_cols=67 Identities=13% Similarity=0.200 Sum_probs=39.0
Q ss_pred EEEEeeCce-ee-EEEcCCCCceEEEEecCc---eEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCC
Q 006811 142 LEKIGNGSY-LN-MVAHPDGSNRAFFSNQEG---KIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHP 216 (630)
Q Consensus 142 le~va~Gl~-~~-ma~~pDGs~RlfV~eq~G---~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhP 216 (630)
+..+..+.. .. ++++|||. ++++....| .|+++++ +. ++.++ .+ ....+..+++|+|
T Consensus 76 ~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~i~v~d~-~~--~~~~~------------~~--~~~~~~~~~~~sp 137 (331)
T 3u4y_A 76 VVAIQEGQSSMADVDITPDDQ-FAVTVTGLNHPFNMQSYSF-LK--NKFIS------------TI--PIPYDAVGIAISP 137 (331)
T ss_dssp EEEEEECSSCCCCEEECTTSS-EEEECCCSSSSCEEEEEET-TT--TEEEE------------EE--ECCTTEEEEEECT
T ss_pred EEecccCCCCccceEECCCCC-EEEEecCCCCcccEEEEEC-CC--CCeEE------------EE--ECCCCccceEECC
Confidence 444444444 56 99999995 577555553 8999874 22 22221 11 1233467999998
Q ss_pred CCCCCCEEEEEEe
Q 006811 217 NFAKNGRFFASFN 229 (630)
Q Consensus 217 dF~~Ng~~YvsYs 229 (630)
+ ..++|+.-.
T Consensus 138 d---g~~l~~~~~ 147 (331)
T 3u4y_A 138 N---GNGLILIDR 147 (331)
T ss_dssp T---SSCEEEEEE
T ss_pred C---CCEEEEEec
Confidence 4 335776543
No 79
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.16 E-value=0.21 Score=51.94 Aligned_cols=27 Identities=26% Similarity=0.297 Sum_probs=22.7
Q ss_pred EEEEEeeCce--eeEEEcC-CCCceEEEEecC
Q 006811 141 CLEKIGNGSY--LNMVAHP-DGSNRAFFSNQE 169 (630)
Q Consensus 141 ~le~va~Gl~--~~ma~~p-DGs~RlfV~eq~ 169 (630)
..|.++.|++ +.|++.| +| +||++|..
T Consensus 193 ~~~i~a~G~rnp~g~a~d~~~g--~l~v~d~g 222 (352)
T 2ism_A 193 RPEVYSLGHRNPQGLAWHPKTG--ELFSSEHG 222 (352)
T ss_dssp CTTEEEECCSEECCCEECTTTC--CEEEEEEC
T ss_pred CccEEEEcCCCcccEEEECCCC--CEEEEEcC
Confidence 5678899998 9999999 55 79999963
No 80
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.00 E-value=2.6 Score=40.96 Aligned_cols=59 Identities=14% Similarity=0.276 Sum_probs=36.9
Q ss_pred eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 227 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Yvs 227 (630)
..++++|||. ++|++.. .|.|+++++. ++. ..++ ...........+++|+|+ ..++|+.
T Consensus 87 ~~~~~s~dg~-~l~~~~~~~~~i~~~d~~-~~~--~~~~-----------~~~~~~~~~~~~~~~s~d---g~~l~~~ 146 (343)
T 1ri6_A 87 THISTDHQGQ-FVFVGSYNAGNVSVTRLE-DGL--PVGV-----------VDVVEGLDGCHSANISPD---NRTLWVP 146 (343)
T ss_dssp SEEEECTTSS-EEEEEETTTTEEEEEEEE-TTE--EEEE-----------EEEECCCTTBCCCEECTT---SSEEEEE
T ss_pred cEEEEcCCCC-EEEEEecCCCeEEEEECC-CCc--cccc-----------cccccCCCCceEEEECCC---CCEEEEe
Confidence 7899999995 6888876 7889988753 222 1110 001123345788999984 3357664
No 81
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.89 E-value=3.8 Score=45.01 Aligned_cols=75 Identities=8% Similarity=-0.009 Sum_probs=47.9
Q ss_pred CCcEEEEEeeCce-eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCC
Q 006811 138 QGLCLEKIGNGSY-LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHP 216 (630)
Q Consensus 138 ~G~~le~va~Gl~-~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhP 216 (630)
.|=++.++..|.. ..++++|||. ++|++.++|.|+++++. ..+++.+ ..+. ...+..++||+|
T Consensus 168 t~~~~~~i~~g~~~~~v~~spdg~-~l~v~~~d~~V~v~D~~-~~t~~~~------------~~i~--~g~~p~~va~sp 231 (543)
T 1nir_A 168 SKKIVKVIDTGYAVHISRMSASGR-YLLVIGRDARIDMIDLW-AKEPTKV------------AEIK--IGIEARSVESSK 231 (543)
T ss_dssp TCCEEEEEECSTTEEEEEECTTSC-EEEEEETTSEEEEEETT-SSSCEEE------------EEEE--CCSEEEEEEECC
T ss_pred CceEEEEEecCcccceEEECCCCC-EEEEECCCCeEEEEECc-CCCCcEE------------EEEe--cCCCcceEEeCC
Confidence 3445666665655 6788999996 89999999999999751 1122221 1222 234678999998
Q ss_pred CCC-CCCEEEEEE
Q 006811 217 NFA-KNGRFFASF 228 (630)
Q Consensus 217 dF~-~Ng~~YvsY 228 (630)
-=. ...++|+.-
T Consensus 232 ~~~~dg~~l~v~~ 244 (543)
T 1nir_A 232 FKGYEDRYTIAGA 244 (543)
T ss_dssp STTCTTTEEEEEE
T ss_pred CcCCCCCEEEEEE
Confidence 101 145688754
No 82
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.78 E-value=3.8 Score=41.09 Aligned_cols=66 Identities=18% Similarity=0.386 Sum_probs=40.9
Q ss_pred EEEEEeeCce-eeEEEcCCCCceEEEEe-cCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCC
Q 006811 141 CLEKIGNGSY-LNMVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNF 218 (630)
Q Consensus 141 ~le~va~Gl~-~~ma~~pDGs~RlfV~e-q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF 218 (630)
++..+..+-. ..|+++|||. ++|++. .+|.|+++++ +. ++.+. .+. ......+++|+|+
T Consensus 24 ~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~d~~i~v~d~-~~--~~~~~------------~~~--~~~~v~~~~~spd- 84 (391)
T 1l0q_A 24 VTATIPVGSNPMGAVISPDGT-KVYVANAHSNDVSIIDT-AT--NNVIA------------TVP--AGSSPQGVAVSPD- 84 (391)
T ss_dssp EEEEEECSSSEEEEEECTTSS-EEEEEEGGGTEEEEEET-TT--TEEEE------------EEE--CSSSEEEEEECTT-
T ss_pred EEEEeecCCCcceEEECCCCC-EEEEECCCCCeEEEEEC-CC--CeEEE------------EEE--CCCCccceEECCC-
Confidence 3444443333 7899999995 677776 6899999974 22 22221 111 1237889999984
Q ss_pred CCCCEEEEE
Q 006811 219 AKNGRFFAS 227 (630)
Q Consensus 219 ~~Ng~~Yvs 227 (630)
..++|+.
T Consensus 85 --g~~l~~~ 91 (391)
T 1l0q_A 85 --GKQVYVT 91 (391)
T ss_dssp --SSEEEEE
T ss_pred --CCEEEEE
Confidence 4456664
No 83
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=94.72 E-value=4 Score=41.02 Aligned_cols=56 Identities=18% Similarity=0.239 Sum_probs=36.9
Q ss_pred eeEEEcCCCCceEEE-EecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 006811 151 LNMVAHPDGSNRAFF-SNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 227 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV-~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Yvs 227 (630)
-+|++.||+ ++||+ .++.++|+.++. + ++.++ .+...+..-+=|||+. .++++||+
T Consensus 30 SGla~~~~~-~~L~aV~d~~~~I~~ld~-~---g~v~~------------~i~l~g~~D~EGIa~~----~~g~~~vs 86 (255)
T 3qqz_A 30 SSLTWSAQS-NTLFSTINKPAAIVEMTT-N---GDLIR------------TIPLDFVKDLETIEYI----GDNQFVIS 86 (255)
T ss_dssp EEEEEETTT-TEEEEEEETTEEEEEEET-T---CCEEE------------EEECSSCSSEEEEEEC----STTEEEEE
T ss_pred ceeEEeCCC-CEEEEEECCCCeEEEEeC-C---CCEEE------------EEecCCCCChHHeEEe----CCCEEEEE
Confidence 679999986 48996 667899998873 2 33332 2222333456788887 47787776
No 84
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.72 E-value=0.52 Score=49.04 Aligned_cols=38 Identities=21% Similarity=0.320 Sum_probs=30.8
Q ss_pred CCCeEEEeccccceeeeecCCCCCe-eEEEeccCCCceeEEEecc
Q 006811 384 LQPEIWALGLRNPWRCSFDSDRPSY-FMCADVGQDVYEEVDIITR 427 (630)
Q Consensus 384 ~~pEI~A~GlRNP~r~afD~~~g~~-l~~~DvG~d~~EEIn~I~~ 427 (630)
..-|++|.||.+|+.++|++. | + ||++|.. -+|.+|..
T Consensus 8 ~~~~~va~~l~~P~~i~~~pd-G-~~l~V~e~~----G~i~~~~~ 46 (353)
T 2g8s_A 8 VNVEVLQDKLDHPWALAFLPD-N-HGMLITLRG----GELRHWQA 46 (353)
T ss_dssp SEEEEEEEEESSEEEEEECST-T-CCEEEEETT----TEEEEEET
T ss_pred cEEEEEECCCCCcEEEEEcCC-C-CEEEEEeCC----ceEEEEeC
Confidence 356899999999999999997 4 6 9999974 36777753
No 85
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.31 E-value=4.9 Score=40.30 Aligned_cols=68 Identities=15% Similarity=0.355 Sum_probs=42.1
Q ss_pred CcEEEEEeeCce-eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCC
Q 006811 139 GLCLEKIGNGSY-LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHP 216 (630)
Q Consensus 139 G~~le~va~Gl~-~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhP 216 (630)
|-.+..+..+-. ..+++.|||. +++++.. .|.|+++++ +. ++.+. ......+..+++|+|
T Consensus 64 ~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~v~v~d~-~~--~~~~~--------------~~~~~~~~~~~~~s~ 125 (391)
T 1l0q_A 64 NNVIATVPAGSSPQGVAVSPDGK-QVYVTNMASSTLSVIDT-TS--NTVAG--------------TVKTGKSPLGLALSP 125 (391)
T ss_dssp TEEEEEEECSSSEEEEEECTTSS-EEEEEETTTTEEEEEET-TT--TEEEE--------------EEECSSSEEEEEECT
T ss_pred CeEEEEEECCCCccceEECCCCC-EEEEEECCCCEEEEEEC-CC--CeEEE--------------EEeCCCCcceEEECC
Confidence 334444443334 7899999996 6888775 599999974 22 22211 111234678999998
Q ss_pred CCCCCCEEEEE
Q 006811 217 NFAKNGRFFAS 227 (630)
Q Consensus 217 dF~~Ng~~Yvs 227 (630)
+ ..++|++
T Consensus 126 d---g~~l~~~ 133 (391)
T 1l0q_A 126 D---GKKLYVT 133 (391)
T ss_dssp T---SSEEEEE
T ss_pred C---CCEEEEE
Confidence 5 4457665
No 86
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.19 E-value=0.72 Score=50.00 Aligned_cols=40 Identities=8% Similarity=0.138 Sum_probs=31.3
Q ss_pred CCCCeEEEeccccceeeeecCCCCCeeEEEeccCCCceeEEEecc
Q 006811 383 GLQPEIWALGLRNPWRCSFDSDRPSYFMCADVGQDVYEEVDIITR 427 (630)
Q Consensus 383 ~~~pEI~A~GlRNP~r~afD~~~g~~l~~~DvG~d~~EEIn~I~~ 427 (630)
+...|++|-||.+||+++|+|. | +||++|... .+|.+|..
T Consensus 16 gf~~~~~a~~l~~P~~~a~~pd-G-~l~V~e~~g---g~I~~~~~ 55 (454)
T 1cru_A 16 NFDKKVILSNLNKPHALLWGPD-N-QIWLTERAT---GKILRVNP 55 (454)
T ss_dssp TSCEEEEECCCSSEEEEEECTT-S-CEEEEETTT---CEEEEECT
T ss_pred CeEEEEEECCCCCceEEEEcCC-C-cEEEEEcCC---CEEEEEEC
Confidence 3467999999999999999997 4 699998743 35666653
No 87
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.05 E-value=2.5 Score=42.80 Aligned_cols=33 Identities=6% Similarity=-0.081 Sum_probs=28.2
Q ss_pred cceeeeecCCCCCeeEEEeccCCCceeEEEeccC
Q 006811 395 NPWRCSFDSDRPSYFMCADVGQDVYEEVDIITRG 428 (630)
Q Consensus 395 NP~r~afD~~~g~~l~~~DvG~d~~EEIn~I~~G 428 (630)
-|.|++||+.+. +||++.-.++..=||+++.+.
T Consensus 207 v~nGIa~~~~~~-~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 207 VLNGIAWDQENK-RIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp CEEEEEEETTTT-EEEEEETTCSEEEEEEEEECC
T ss_pred ceEEEEEcCCCC-EEEEECCCCCeEEEEEEeccc
Confidence 357999999865 899999999998999988764
No 88
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=93.37 E-value=1.5 Score=43.98 Aligned_cols=63 Identities=16% Similarity=0.284 Sum_probs=38.1
Q ss_pred eeEEEcCCCCceEEEEe-cCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 228 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~e-q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsY 228 (630)
..|+++|||. ++||+. ..+.|+++++. .+.-+.++ .+ ........+..+++|+|| ..++|++-
T Consensus 214 ~~~~~spdg~-~l~v~~~~~~~v~v~~~~-~g~~~~~~--------~~--~~~~~~~~~~~~i~~spd---g~~l~v~~ 277 (361)
T 3scy_A 214 RHLIFNSDGK-FAYLINEIGGTVIAFRYA-DGMLDEIQ--------TV--AADTVNAQGSGDIHLSPD---GKYLYASN 277 (361)
T ss_dssp EEEEECTTSS-EEEEEETTTCEEEEEEEE-TTEEEEEE--------EE--ESCSSCCCCEEEEEECTT---SSEEEEEE
T ss_pred eEEEEcCCCC-EEEEEcCCCCeEEEEEec-CCceEEeE--------EE--ecCCCCCCCcccEEECCC---CCEEEEEC
Confidence 6899999995 688888 48999998753 23211110 00 001122356689999985 33566643
No 89
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=91.70 E-value=5.8 Score=43.48 Aligned_cols=60 Identities=12% Similarity=0.212 Sum_probs=37.0
Q ss_pred eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..++++|||. +++|+.+ .|+|++++..+ + +.+. + ..+ .....+.+++|+|+ ..+||+.-.
T Consensus 283 ~~i~~s~~~~-~~~vs~~~~g~i~vvd~~~-~--~~l~---------~-~~i--~~~~~~~~~~~spd---g~~l~va~~ 343 (543)
T 1nir_A 283 AAIIASHEHP-EFIVNVKETGKVLLVNYKD-I--DNLT---------V-TSI--GAAPFLHDGGWDSS---HRYFMTAAN 343 (543)
T ss_dssp EEEEECSSSS-EEEEEETTTTEEEEEECTT-S--SSCE---------E-EEE--ECCSSCCCEEECTT---SCEEEEEEG
T ss_pred EEEEECCCCC-EEEEEECCCCeEEEEEecC-C--Ccce---------e-EEe--ccCcCccCceECCC---CCEEEEEec
Confidence 5688999885 6777765 69999987422 1 1111 0 011 22456889999984 345776543
No 90
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=91.39 E-value=13 Score=37.58 Aligned_cols=57 Identities=7% Similarity=0.191 Sum_probs=36.2
Q ss_pred eeEEEcCCCCceEEEEec--------CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQ--------EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNG 222 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq--------~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng 222 (630)
..+++.|||. +++++.. +|.|+++++. . ++.+. .+ .......+++|+|+ ..
T Consensus 257 ~~~~~~~~g~-~l~~~~~~~~~~~~~dg~i~~~d~~-~--~~~~~------------~~--~~~~~~~~~~~~~~---g~ 315 (433)
T 3bws_A 257 RGLLLSKDGK-ELYIAQFSASNQESGGGRLGIYSMD-K--EKLID------------TI--GPPGNKRHIVSGNT---EN 315 (433)
T ss_dssp EEEEECTTSS-EEEEEEEESCTTCSCCEEEEEEETT-T--TEEEE------------EE--EEEECEEEEEECSS---TT
T ss_pred eEEEEcCCCC-EEEEEECCCCccccCCCeEEEEECC-C--CcEEe------------ec--cCCCCcceEEECCC---CC
Confidence 7899999996 7888873 7899998742 2 22221 11 11225678999984 34
Q ss_pred EEEEEE
Q 006811 223 RFFASF 228 (630)
Q Consensus 223 ~~YvsY 228 (630)
++|+.-
T Consensus 316 ~l~~~~ 321 (433)
T 3bws_A 316 KIYVSD 321 (433)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 677754
No 91
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=91.05 E-value=10 Score=39.41 Aligned_cols=26 Identities=23% Similarity=0.406 Sum_probs=19.6
Q ss_pred eeEEEcCCCCceEEEEecC---ceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQE---GKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~---G~V~~~~~ 177 (630)
..++++|||. ++..+..+ ..|+++++
T Consensus 182 ~~~~~Spdg~-~la~~s~~~~~~~i~~~d~ 210 (415)
T 2hqs_A 182 MSPAWSPDGS-KLAYVTFESGRSALVIQTL 210 (415)
T ss_dssp EEEEECTTSS-EEEEEECTTSSCEEEEEET
T ss_pred eeeEEcCCCC-EEEEEEecCCCcEEEEEEC
Confidence 7899999996 56555544 38999875
No 92
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=89.90 E-value=1.7 Score=43.79 Aligned_cols=64 Identities=9% Similarity=0.158 Sum_probs=36.3
Q ss_pred eeEEEcCCCCceEEEEecCc--eEEEEEccCCCC--CceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQEG--KIWLATIPEQGL--GETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFA 226 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G--~V~~~~~p~~gs--g~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Yv 226 (630)
-+|++.|++. |||++.+.. .||.++ |. ...+++ ++.........-+.+-++++|| .++++||
T Consensus 124 EGLA~d~~~~-~L~va~E~~p~~i~~~~----g~~~~~~l~i------~~~~~~~~~~~~~d~S~l~~dp---~tg~lli 189 (255)
T 3qqz_A 124 EGLAYSRQDH-TFWFFKEKNPIEVYKVN----GLLSSNELHI------SKDKALQRQFTLDDVSGAEFNQ---QKNTLLV 189 (255)
T ss_dssp EEEEEETTTT-EEEEEEESSSEEEEEEE----STTCSSCCEE------EECHHHHHTCCSSCCCEEEEET---TTTEEEE
T ss_pred ceEEEeCCCC-EEEEEECcCCceEEEEc----ccccCCceee------ecchhhccccccCCceeEEEcC---CCCeEEE
Confidence 5789999874 899988754 455543 21 011111 1110000001235688999998 5789998
Q ss_pred EE
Q 006811 227 SF 228 (630)
Q Consensus 227 sY 228 (630)
.-
T Consensus 190 LS 191 (255)
T 3qqz_A 190 LS 191 (255)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 93
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=89.89 E-value=9.9 Score=38.69 Aligned_cols=27 Identities=7% Similarity=-0.187 Sum_probs=18.5
Q ss_pred cceeeeecCCCCCeeEEEeccCCCceeE
Q 006811 395 NPWRCSFDSDRPSYFMCADVGQDVYEEV 422 (630)
Q Consensus 395 NP~r~afD~~~g~~l~~~DvG~d~~EEI 422 (630)
.+-|+|||+++. +||++.=-+...=||
T Consensus 236 vlNGIA~dp~~~-rlfVTGK~Wp~~~ev 262 (268)
T 3nok_A 236 VLNGIAVEPGSG-RIFMTGKLWPRLFEV 262 (268)
T ss_dssp CEEEEEECTTTC-CEEEEETTCSEEEEE
T ss_pred ceEEEEEcCCCC-EEEEeCCCCCceEEE
Confidence 467999999876 799975544433333
No 94
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=89.21 E-value=18 Score=35.65 Aligned_cols=68 Identities=13% Similarity=0.110 Sum_probs=38.8
Q ss_pred cCcEEEEEeccceeEEeecCCCCCCCeeEEEeeeecCCCCcccccccCCcCCCCCCccceEEEcCCCcEEEEeCC-----
Q 006811 495 FGRYLYADLYATALWAASESPENSGNFTTSKIPFSCARDSPIQCKVLPGNDLPSLGYIYSFGEDNRKDIFILTSD----- 569 (630)
Q Consensus 495 ~G~ylfgD~~sg~lw~~~~~p~~sG~~~~~~i~f~c~~~~p~~c~~~~g~~~~~~gri~sf~ed~dGeLYvlts~----- 569 (630)
.|.+++++...+++..+. |+ +|+.. .++. .. ..++. .+..+.++...++|.+||.+.+
T Consensus 175 ~g~~~v~~~~~~~v~~~d--~~-tG~~~-w~~~-----~~-----~~~~~---~l~~~~~~~~~~~G~i~v~~~~g~~~~ 237 (276)
T 3no2_A 175 NGDCLVACGDAHCFVQLN--LE-SNRIV-RRVN-----AN-----DIEGV---QLFFVAQLFPLQNGGLYICNWQGHDRE 237 (276)
T ss_dssp TSCEEEECBTTSEEEEEC--TT-TCCEE-EEEE-----GG-----GSBSC---CCSEEEEEEECTTSCEEEEEECTTCTT
T ss_pred CCCEEEEeCCCCeEEEEe--Cc-CCcEE-EEec-----CC-----CCCCc---cccccccceEcCCCCEEEEeccCcccc
Confidence 467777777666766654 32 25331 1111 00 00111 1346788999999999999841
Q ss_pred -------eEEEEecCCC
Q 006811 570 -------GVYRVVRPSR 579 (630)
Q Consensus 570 -------gIyRiv~ps~ 579 (630)
.+++|.+...
T Consensus 238 ~~~~~~~~~~~~~~~g~ 254 (276)
T 3no2_A 238 AGKGKHPQLVEIDSEGK 254 (276)
T ss_dssp GGGSCCCSEEEECTTSB
T ss_pred ccccCCceEEEECCCCC
Confidence 3888765443
No 95
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=89.11 E-value=10 Score=38.45 Aligned_cols=31 Identities=6% Similarity=-0.033 Sum_probs=24.1
Q ss_pred cceeeeecCCCCCeeEEEeccCCCceeEEEec
Q 006811 395 NPWRCSFDSDRPSYFMCADVGQDVYEEVDIIT 426 (630)
Q Consensus 395 NP~r~afD~~~g~~l~~~DvG~d~~EEIn~I~ 426 (630)
-|-|+||||.+. +||++-=-+...=||.++.
T Consensus 226 vlNGIA~dp~~~-~lfVTGK~Wp~~~ev~~~~ 256 (262)
T 3nol_A 226 VLNGIAWDKEHH-RLFVTGKLWPKVFEITLTQ 256 (262)
T ss_dssp CEEEEEEETTTT-EEEEEETTCSEEEEEEEEE
T ss_pred ceEEEEEcCCCC-EEEEECCCCCceEEEEEec
Confidence 467999999876 7999877777666776654
No 96
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=89.01 E-value=3.3 Score=43.49 Aligned_cols=20 Identities=25% Similarity=0.529 Sum_probs=16.5
Q ss_pred CceeeeeeCCCCCCCCEEEEEEee
Q 006811 207 FGLMGMAFHPNFAKNGRFFASFNC 230 (630)
Q Consensus 207 ~GLLGiAfhPdF~~Ng~~YvsYs~ 230 (630)
.|.-|||+|| +|..||.-+.
T Consensus 137 ~~~nDvavD~----~GnaYVt~s~ 156 (334)
T 2p9w_A 137 FGVVQSAQDR----DGNSYVAFAL 156 (334)
T ss_dssp EEEEEEEECT----TSCEEEEEEE
T ss_pred cCCceeEECC----CCCEEEeCCC
Confidence 4689999996 7999998764
No 97
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=88.71 E-value=8.9 Score=37.38 Aligned_cols=76 Identities=11% Similarity=0.077 Sum_probs=47.5
Q ss_pred EEEeeCce---eeEEEcCC---CCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCC
Q 006811 143 EKIGNGSY---LNMVAHPD---GSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHP 216 (630)
Q Consensus 143 e~va~Gl~---~~ma~~pD---Gs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhP 216 (630)
..+..|-. ..++|+|+ +...++++...|.|+++++.. ++.+. -+........+..+..++|+|
T Consensus 11 ~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~---~~~~~--------~~~~~~~~~~~~~v~~~~~~~ 79 (366)
T 3k26_A 11 NSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHS---QGEIR--------LLQSYVDADADENFYTCAWTY 79 (366)
T ss_dssp EEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECG---GGCEE--------EEEEEECSCTTCCEEEEEEEE
T ss_pred EEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCC---CcEEE--------eeeeccccCCCCcEEEEEecc
Confidence 34554543 78999985 666788888899999987532 12111 010000112356789999999
Q ss_pred CCCCCCEEEEEEe
Q 006811 217 NFAKNGRFFASFN 229 (630)
Q Consensus 217 dF~~Ng~~YvsYs 229 (630)
+-..++.+.++-+
T Consensus 80 ~~~~~~~~l~~~~ 92 (366)
T 3k26_A 80 DSNTSHPLLAVAG 92 (366)
T ss_dssp CTTTCCEEEEEEE
T ss_pred CCCCCCCEEEEec
Confidence 8877677666543
No 98
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=88.67 E-value=10 Score=38.36 Aligned_cols=60 Identities=17% Similarity=0.223 Sum_probs=36.5
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 227 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Yvs 227 (630)
..+++.|++...+.....+|.|+++++. .+ +.+ ..+. ....+.....++|+|+ ++.++++
T Consensus 185 ~~v~~s~~~~~~~~s~~~dg~v~~wd~~-~~--~~~------~~~~-----~~~~~~~v~~v~~sp~---~~~~la~ 244 (357)
T 4g56_B 185 NCVAACPGKDTIFLSCGEDGRILLWDTR-KP--KPA------TRID-----FCASDTIPTSVTWHPE---KDDTFAC 244 (357)
T ss_dssp EEEEECTTCSSCEEEEETTSCEEECCTT-SS--SCB------CBCC-----CTTCCSCEEEEEECTT---STTEEEE
T ss_pred EEEEEccCCCceeeeeccCCceEEEECC-CC--cee------eeee-----eccccccccchhhhhc---ccceEEE
Confidence 6789999986566677789999998642 22 211 0011 1123445788999985 4445443
No 99
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=88.65 E-value=13 Score=35.96 Aligned_cols=62 Identities=15% Similarity=0.141 Sum_probs=42.0
Q ss_pred CcEEEEEeeCce---eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeC
Q 006811 139 GLCLEKIGNGSY---LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFH 215 (630)
Q Consensus 139 G~~le~va~Gl~---~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfh 215 (630)
.+.++....|-. ..++++|||. +++.+..+|.|++++.. ++ +.. ........+...++|+
T Consensus 12 ~~~~~~~~~gh~~~v~~~~~s~~~~-~l~s~~~dg~i~iw~~~-~~--~~~-------------~~~~~h~~~v~~~~~~ 74 (312)
T 4ery_A 12 NYALKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAY-DG--KFE-------------KTISGHKLGISDVAWS 74 (312)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETT-TC--CEE-------------EEECCCSSCEEEEEEC
T ss_pred CceeEEEEcccCCcEEEEEECCCCC-EEEEeeCCCeEEEEeCC-Cc--ccc-------------hhhccCCCceEEEEEc
Confidence 466666655543 7899999995 67777889999998742 22 111 1223345678999999
Q ss_pred CC
Q 006811 216 PN 217 (630)
Q Consensus 216 Pd 217 (630)
|+
T Consensus 75 ~~ 76 (312)
T 4ery_A 75 SD 76 (312)
T ss_dssp TT
T ss_pred CC
Confidence 84
No 100
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=88.20 E-value=24 Score=35.72 Aligned_cols=57 Identities=11% Similarity=0.060 Sum_probs=37.2
Q ss_pred eeEEEcCCCCceEEEEe-cCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 228 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~e-q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsY 228 (630)
..+++.|||. ++|++. .+|.|+++++ .. ++.+. ......+..+++++|+ ..++|+.-
T Consensus 215 ~~~~~~~~~~-~l~~~~~~~~~i~~~d~-~~--~~~~~--------------~~~~~~~~~~~~~~~~---g~~l~~~~ 272 (433)
T 3bws_A 215 KILLYDPIRD-LVYCSNWISEDISVIDR-KT--KLEIR--------------KTDKIGLPRGLLLSKD---GKELYIAQ 272 (433)
T ss_dssp EEEEEETTTT-EEEEEETTTTEEEEEET-TT--TEEEE--------------ECCCCSEEEEEEECTT---SSEEEEEE
T ss_pred eEEEEcCCCC-EEEEEecCCCcEEEEEC-CC--CcEEE--------------EecCCCCceEEEEcCC---CCEEEEEE
Confidence 7889999996 687887 6899999874 22 22211 0112345789999984 34666544
No 101
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=87.17 E-value=7.6 Score=41.18 Aligned_cols=55 Identities=22% Similarity=0.355 Sum_probs=36.6
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 227 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Yvs 227 (630)
..|+|+|||. +|..+..+|.|++++. + ++.+ ....+-+.....|+|+|+ +++.++
T Consensus 20 ~~~a~spdg~-~las~~~d~~v~iWd~--~--~~~~-------------~~l~gh~~~V~~l~fspd----g~~las 74 (577)
T 2ymu_A 20 RGVAFSPDGQ-TIASASDDKTVKLWNR--N--GQLL-------------QTLTGHSSSVWGVAFSPD----GQTIAS 74 (577)
T ss_dssp EEEEECTTSS-CEEEEETTSEEEEECT--T--SCEE-------------EEEECCSSCEEEEEECTT----SSEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEEC--C--CCEE-------------EEEeCCCCCEEEEEECCC----CCEEEE
Confidence 6899999995 5666678899999862 2 2222 122334567889999984 554444
No 102
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=86.84 E-value=2.2 Score=43.42 Aligned_cols=58 Identities=21% Similarity=0.367 Sum_probs=34.4
Q ss_pred eeEEEcCCCCceEEEEe-c------CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCE
Q 006811 151 LNMVAHPDGSNRAFFSN-Q------EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGR 223 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~e-q------~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~ 223 (630)
..++|.||| +++++- . +|.||++..++ +. .. ..++ ......+.+..+++|+|+ ++
T Consensus 46 ~~v~fSpDG--~~las~s~d~~~~wd~~v~~~~~~~-~~--~~-----~~~~----~~~~~~~~~V~~~~~s~d----~~ 107 (357)
T 4g56_B 46 GAVRYRRDG--ALLLAASSLSSRTWGGSIWVFKDPE-GA--PN-----ESLC----TAGVQTEAGVTDVAWVSE----KG 107 (357)
T ss_dssp EEEEECSSS--CEEEEEECSSSSSCCEEEEEESSCC------C-----GGGC----SEEEECSSCEEEEEEETT----TE
T ss_pred EEEEECCCC--CEEEEEcCCCCccccCeEEEEECCC-CC--cc-----eeEe----cccCCCCCCEEEEEEcCC----CC
Confidence 578999999 466554 3 68899886432 21 10 0010 112345678999999984 55
Q ss_pred EEE
Q 006811 224 FFA 226 (630)
Q Consensus 224 ~Yv 226 (630)
+.+
T Consensus 108 ~l~ 110 (357)
T 4g56_B 108 ILV 110 (357)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 103
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=86.59 E-value=11 Score=39.53 Aligned_cols=70 Identities=13% Similarity=0.185 Sum_probs=47.4
Q ss_pred EEEEEeeCce--eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 141 CLEKIGNGSY--LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 141 ~le~va~Gl~--~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
.+++++.++. =++++.|||+ +|||+|. .++||++++.++|+ +. .. ++. .-....=||++|+
T Consensus 212 ~~~~~~~~l~~pNGia~spDg~-~lYvadt~~~~I~~~~~~~~g~---l~--~~--------~~~-~~~g~PDGi~vD~- 275 (355)
T 3sre_A 212 DVRVVAEGFDFANGINISPDGK-YVYIAELLAHKIHVYEKHANWT---LT--PL--------RVL-SFDTLVDNISVDP- 275 (355)
T ss_dssp CCEEEEEEESSEEEEEECTTSS-EEEEEEGGGTEEEEEEECTTSC---EE--EE--------EEE-ECSSEEEEEEECT-
T ss_pred eEEEeecCCcccCcceECCCCC-EEEEEeCCCCeEEEEEECCCCc---Ee--cC--------EEE-eCCCCCceEEEeC-
Confidence 4567888876 6799999996 7999996 68999988643332 21 01 122 1134566899984
Q ss_pred CCCCCEEEEEE
Q 006811 218 FAKNGRFFASF 228 (630)
Q Consensus 218 F~~Ng~~YvsY 228 (630)
++|.+|+.-
T Consensus 276 --e~G~lwva~ 284 (355)
T 3sre_A 276 --VTGDLWVGC 284 (355)
T ss_dssp --TTCCEEEEE
T ss_pred --CCCcEEEEe
Confidence 268999843
No 104
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=86.49 E-value=25 Score=35.10 Aligned_cols=30 Identities=10% Similarity=0.116 Sum_probs=22.2
Q ss_pred cceeeeecCCCCCeeEEEeccCCCceeEEEe
Q 006811 395 NPWRCSFDSDRPSYFMCADVGQDVYEEVDII 425 (630)
Q Consensus 395 NP~r~afD~~~g~~l~~~DvG~d~~EEIn~I 425 (630)
-+-|+|||+.+. +||++-=-+...=||.++
T Consensus 205 vlNGIA~d~~~~-~lfVTGK~wp~~~~v~~~ 234 (243)
T 3mbr_X 205 VLNGIAFDAEHD-RLFVTGKRWPMLYEIRLT 234 (243)
T ss_dssp CEEEEEEETTTT-EEEEEETTCSEEEEEEEC
T ss_pred ceEEEEEcCCCC-EEEEECCCCCcEEEEEEe
Confidence 457999999876 799986666555566654
No 105
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=85.92 E-value=7.7 Score=38.69 Aligned_cols=50 Identities=14% Similarity=0.217 Sum_probs=33.3
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..+++.|||. .|+.+..+|.|+++++.. + +.+ .....-......++|+|+
T Consensus 210 ~~l~~spd~~-~l~s~s~dg~i~iwd~~~-~--~~~-------------~~~~~h~~~v~~~~~sp~ 259 (321)
T 3ow8_A 210 RSLTFSPDSQ-LLVTASDDGYIKIYDVQH-A--NLA-------------GTLSGHASWVLNVAFCPD 259 (321)
T ss_dssp CEEEECTTSC-EEEEECTTSCEEEEETTT-C--CEE-------------EEECCCSSCEEEEEECTT
T ss_pred eEEEEcCCCC-EEEEEcCCCeEEEEECCC-c--cee-------------EEEcCCCCceEEEEECCC
Confidence 6899999994 566667899999997532 1 111 112233455789999984
No 106
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=85.89 E-value=11 Score=37.71 Aligned_cols=53 Identities=15% Similarity=0.279 Sum_probs=33.7
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..++++|||. .|+.+..+|.|+++++........+ .+..........++|+|+
T Consensus 109 ~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~-------------~~~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 109 KSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECV-------------SVLNSHTQDVKHVVWHPS 161 (345)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEEECTTSCEEEE-------------EEECCCCSCEEEEEECSS
T ss_pred eEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeEEE-------------EEecCcCCCeEEEEECCC
Confidence 7899999995 5666778999999876321110000 112233455788999985
No 107
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=85.85 E-value=8.7 Score=37.35 Aligned_cols=26 Identities=23% Similarity=0.359 Sum_probs=21.2
Q ss_pred eeEEEcCCCCceEEEEec-CceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQ-EGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq-~G~V~~~~~ 177 (630)
..+++.|||. ++|++.. .|.|+++++
T Consensus 46 ~~~~~s~dg~-~~~v~~~~~~~i~~~d~ 72 (349)
T 1jmx_B 46 GTAMMAPDNR-TAYVLNNHYGDIYGIDL 72 (349)
T ss_dssp CEEEECTTSS-EEEEEETTTTEEEEEET
T ss_pred ceeEECCCCC-EEEEEeCCCCcEEEEeC
Confidence 6789999994 6888874 789999874
No 108
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=85.63 E-value=13 Score=37.01 Aligned_cols=39 Identities=18% Similarity=0.294 Sum_probs=28.7
Q ss_pred CCcEEEEEeeCce--eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 138 QGLCLEKIGNGSY--LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 138 ~G~~le~va~Gl~--~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
.|-++..+..+-. +.+++.|||. .++....+|.|+++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~spdg~-~l~~g~~dg~v~i~~~ 151 (321)
T 3ow8_A 111 NGKQIKSIDAGPVDAWTLAFSPDSQ-YLATGTHVGKVNIFGV 151 (321)
T ss_dssp TTEEEEEEECCTTCCCCEEECTTSS-EEEEECTTSEEEEEET
T ss_pred CCCEEEEEeCCCccEEEEEECCCCC-EEEEEcCCCcEEEEEc
Confidence 3556666654433 7899999995 6777778999999975
No 109
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=85.59 E-value=32 Score=34.58 Aligned_cols=25 Identities=12% Similarity=0.155 Sum_probs=20.3
Q ss_pred eeEEEcCCCCceEEEEec---CceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQ---EGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq---~G~V~~~~~ 177 (630)
-+|++.||| +||++.- .+.|++++.
T Consensus 24 ~Gl~~~~dg--~Lyvstg~~~~s~v~~iD~ 51 (266)
T 2iwa_A 24 QGLVYAEND--TLFESTGLYGRSSVRQVAL 51 (266)
T ss_dssp EEEEECSTT--EEEEEECSTTTCEEEEEET
T ss_pred ccEEEeCCC--eEEEECCCCCCCEEEEEEC
Confidence 578999997 8999863 578999874
No 110
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=85.32 E-value=2.2 Score=48.21 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=47.8
Q ss_pred EEEEeeCce-eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCC--CceeeeeeCCC
Q 006811 142 LEKIGNGSY-LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTE--FGLMGMAFHPN 217 (630)
Q Consensus 142 le~va~Gl~-~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e--~GLLGiAfhPd 217 (630)
+..|..|.. -.+.++|||. ++||+.+ ..+|.+++... .+.+ ++ --|+..+.|...-+ .|.+.+||||
T Consensus 270 ~~~Ipvg~~PhGv~~sPDGk-~v~V~~~~s~~VsVid~~~---~~~~-~~---~~l~~~~~v~~~v~vG~gP~h~aF~~- 340 (595)
T 1fwx_A 270 TRYIPIANNPHGCNMAPDKK-HLCVAGKLSPTVTVLDVTR---FDAV-FY---ENADPRSAVVAEPELGLGPLHTAFDG- 340 (595)
T ss_dssp EEEEEEESSCCCEEECTTSS-EEEEECTTSSBEEEEEGGG---HHHH-HH---SCCCGGGGEEECCBCCSCEEEEEECT-
T ss_pred EEEEecCCCceEEEEcCCCC-EEEEeCCCCCeEEEEECcc---cccc-cc---cccCcccceEEEcCCCCCcceEEECC-
Confidence 344544544 7799999996 7999997 68999987521 1100 00 11444455544333 6789999998
Q ss_pred CCCCCEEEEEE
Q 006811 218 FAKNGRFFASF 228 (630)
Q Consensus 218 F~~Ng~~YvsY 228 (630)
+|++|++-
T Consensus 341 ---dG~aY~t~ 348 (595)
T 1fwx_A 341 ---RGNAYTSL 348 (595)
T ss_dssp ---TSEEEEEE
T ss_pred ---CCeEEEEE
Confidence 67777754
No 111
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=85.05 E-value=45 Score=35.77 Aligned_cols=69 Identities=14% Similarity=0.017 Sum_probs=43.9
Q ss_pred EEEEEeeCceeeEEEcCCCCceEEEEe----------cCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCC-----
Q 006811 141 CLEKIGNGSYLNMVAHPDGSNRAFFSN----------QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDT----- 205 (630)
Q Consensus 141 ~le~va~Gl~~~ma~~pDGs~RlfV~e----------q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~----- 205 (630)
.+.+|..|..-+|+++|||. ++||++ +.+.|.+++. . +++.+ .++...+
T Consensus 111 vv~~I~vG~~Pgia~SpDgk-~lyVan~~~~~~~~G~~~~~VsviD~-~--t~~vv------------~~I~v~g~~r~~ 174 (426)
T 3c75_H 111 ILGMTDGGFLPHPVAAEDGS-FFAQASTVFERIARGKRTDYVEVFDP-V--TFLPI------------ADIELPDAPRFL 174 (426)
T ss_dssp EEEEEEECSSCEEEECTTSS-CEEEEEEEEEETTEEEEEEEEEEECT-T--TCCEE------------EEEEETTCCCCC
T ss_pred EEEEEECCCCCceEECCCCC-EEEEEeccccccccCCCCCEEEEEEC-C--CCcEE------------EEEECCCccccc
Confidence 34555555544899999996 899997 4678888862 2 22222 1222221
Q ss_pred -CCceeeeeeCCCCCCCCEEEEEE
Q 006811 206 -EFGLMGMAFHPNFAKNGRFFASF 228 (630)
Q Consensus 206 -e~GLLGiAfhPdF~~Ng~~YvsY 228 (630)
.....+++|+|| ..++||+-
T Consensus 175 ~g~~P~~~~~spD---Gk~lyV~n 195 (426)
T 3c75_H 175 VGTYQWMNALTPD---NKNLLFYQ 195 (426)
T ss_dssp BSCCGGGSEECTT---SSEEEEEE
T ss_pred cCCCcceEEEcCC---CCEEEEEe
Confidence 134678999985 45799974
No 112
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=85.03 E-value=13 Score=36.35 Aligned_cols=50 Identities=14% Similarity=0.046 Sum_probs=33.7
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..++|+|||. .++.+..+|.|+++++. . ++.+ ......+.....++|+|+
T Consensus 17 ~~~~fsp~~~-~l~s~~~dg~v~lWd~~-~--~~~~-------------~~~~~~~~~v~~~~~~~~ 66 (304)
T 2ynn_A 17 KGIDFHPTEP-WVLTTLYSGRVELWNYE-T--QVEV-------------RSIQVTETPVRAGKFIAR 66 (304)
T ss_dssp EEEEECSSSS-EEEEEETTSEEEEEETT-T--TEEE-------------EEEECCSSCEEEEEEEGG
T ss_pred EEEEECCCCC-EEEEEcCCCcEEEEECC-C--Ccee-------------EEeeccCCcEEEEEEeCC
Confidence 7899999995 67777789999999752 2 2221 112233455778888874
No 113
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=84.94 E-value=15 Score=36.54 Aligned_cols=58 Identities=21% Similarity=0.268 Sum_probs=36.4
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..++++|||. .++.+..+|.|+++++.. + +.+ .....-+.....++|+| ++.++++-+
T Consensus 188 ~~~~~~~~~~-~l~sg~~d~~v~~wd~~~-~--~~~-------------~~~~~h~~~v~~v~~~p----~~~~l~s~s 245 (340)
T 1got_B 188 MSLSLAPDTR-LFVSGACDASAKLWDVRE-G--MCR-------------QTFTGHESDINAICFFP----NGNAFATGS 245 (340)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETTT-C--SEE-------------EEECCCSSCEEEEEECT----TSSEEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCcEEEEECCC-C--eeE-------------EEEcCCcCCEEEEEEcC----CCCEEEEEc
Confidence 7899999984 445556799999997532 2 111 11223345678999998 455555443
No 114
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=84.79 E-value=7.9 Score=37.63 Aligned_cols=58 Identities=7% Similarity=0.113 Sum_probs=33.7
Q ss_pred eeEEEcCCCCceEEEEe-cCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 228 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~e-q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsY 228 (630)
+++++.+++ ++||+. ..|.|++++. +. ++.++ .+......+..+++|+|+ ..++|++-
T Consensus 3 ~g~~~~~~~--~~~v~~~~~~~v~~~d~-~~--~~~~~------------~~~~~~~~~~~~~~~s~d---g~~~~v~~ 61 (349)
T 1jmx_B 3 TGPALKAGH--EYMIVTNYPNNLHVVDV-AS--DTVYK------------SCVMPDKFGPGTAMMAPD---NRTAYVLN 61 (349)
T ss_dssp -CCCCCTTC--EEEEEEETTTEEEEEET-TT--TEEEE------------EEECSSCCSSCEEEECTT---SSEEEEEE
T ss_pred ccccccCCC--EEEEEeCCCCeEEEEEC-CC--CcEEE------------EEecCCCCCCceeEECCC---CCEEEEEe
Confidence 345667776 788876 4799999874 22 22221 111222235778999874 34577753
No 115
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=84.60 E-value=25 Score=38.80 Aligned_cols=19 Identities=16% Similarity=0.165 Sum_probs=13.9
Q ss_pred eeEEEcCCCCceEEEEecCc
Q 006811 151 LNMVAHPDGSNRAFFSNQEG 170 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G 170 (630)
..++++|||. +|+++..++
T Consensus 212 ~~~~~SpDg~-~l~~~~~d~ 230 (741)
T 2ecf_A 212 TGYWWAPDDS-AIAYARIDE 230 (741)
T ss_dssp CSEEECTTSS-CEEEEEEEC
T ss_pred cceEECCCCC-EEEEEEEcC
Confidence 5689999996 677765543
No 116
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=84.18 E-value=12 Score=38.07 Aligned_cols=26 Identities=23% Similarity=0.291 Sum_probs=21.3
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
..++++|||. .+..+..+|.|+++++
T Consensus 253 ~~v~~~p~~~-~l~s~s~D~~i~lwd~ 278 (380)
T 3iz6_a 253 NSVKFFPDGQ-RFGTGSDDGTCRLFDM 278 (380)
T ss_dssp CEEEECTTSS-EEEEECSSSCEEEEET
T ss_pred EEEEEecCCC-eEEEEcCCCeEEEEEC
Confidence 6799999995 5666678999999985
No 117
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=83.96 E-value=20 Score=34.03 Aligned_cols=54 Identities=9% Similarity=0.128 Sum_probs=35.2
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..|++.|||. .|+.+..+|.|+++++.. +... .+ + .............++|+|.
T Consensus 15 ~~~~~~~~~~-~l~~~~~dg~i~iw~~~~-~~~~-~~---------~-~~~~~~~~~~v~~~~~~~~ 68 (351)
T 3f3f_A 15 HDVVYDFYGR-HVATCSSDQHIKVFKLDK-DTSN-WE---------L-SDSWRAHDSSIVAIDWASP 68 (351)
T ss_dssp EEEEECSSSS-EEEEEETTSEEEEEEECS-SSCC-EE---------E-EEEEECCSSCEEEEEECCG
T ss_pred eEEEEcCCCC-EEEEeeCCCeEEEEECCC-CCCc-ce---------e-cceeccCCCcEEEEEEcCC
Confidence 6799999995 677777899999998632 2111 00 0 0122344567899999984
No 118
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=83.51 E-value=7.4 Score=41.45 Aligned_cols=57 Identities=9% Similarity=0.084 Sum_probs=36.6
Q ss_pred eeEEEcCCCCceEEEEec-----CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQ-----EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFF 225 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq-----~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Y 225 (630)
+..++.|||. |+||++. .+.|++++. + +++.+ .++..+.. . +|+++|| ..++|
T Consensus 36 ~~~~~~pd~~-~vyV~~~~~~~~~~~V~ViD~-~--t~~v~------------~~I~vG~~--P-~va~spD---G~~ly 93 (386)
T 3sjl_D 36 ILEAPAPDAR-RVYVNDPAHFAAVTQQFVIDG-E--AGRVI------------GMIDGGFL--P-NPVVADD---GSFIA 93 (386)
T ss_dssp BCCCCCCCTT-EEEEEECGGGCSSEEEEEEET-T--TTEEE------------EEEEECSS--C-EEEECTT---SSCEE
T ss_pred eeeccCCCCC-EEEEEcCcccCCCCEEEEEEC-C--CCeEE------------EEEECCCC--C-cEEECCC---CCEEE
Confidence 3456689985 9999997 589999863 2 23322 23433333 2 5999995 45699
Q ss_pred EEEe
Q 006811 226 ASFN 229 (630)
Q Consensus 226 vsYs 229 (630)
|.-+
T Consensus 94 Van~ 97 (386)
T 3sjl_D 94 HAST 97 (386)
T ss_dssp EEEE
T ss_pred EEcc
Confidence 8754
No 119
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=83.18 E-value=61 Score=35.85 Aligned_cols=71 Identities=11% Similarity=0.019 Sum_probs=46.2
Q ss_pred cEEEEEeeCce-eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeC---
Q 006811 140 LCLEKIGNGSY-LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFH--- 215 (630)
Q Consensus 140 ~~le~va~Gl~-~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfh--- 215 (630)
=.+.+|..|.. ..++++|||. ++||+.++|.|.++++. ..+.+.+ .++.. ..+..+|+|+
T Consensus 188 ~v~~~i~~g~~p~~v~~SpDGr-~lyv~~~dg~V~viD~~-~~t~~~v------------~~i~~--G~~P~~ia~s~~~ 251 (567)
T 1qks_A 188 EIKTVLDTGYAVHISRLSASGR-YLFVIGRDGKVNMIDLW-MKEPTTV------------AEIKI--GSEARSIETSKME 251 (567)
T ss_dssp CEEEEEECSSCEEEEEECTTSC-EEEEEETTSEEEEEETT-SSSCCEE------------EEEEC--CSEEEEEEECCST
T ss_pred eEEEEEeCCCCccceEECCCCC-EEEEEcCCCeEEEEECC-CCCCcEe------------EEEec--CCCCceeEEcccc
Confidence 34555666655 6789999996 79999999999998742 1122211 12322 2357899999
Q ss_pred -CCCCCCCEEEEEEe
Q 006811 216 -PNFAKNGRFFASFN 229 (630)
Q Consensus 216 -PdF~~Ng~~YvsYs 229 (630)
|| ..++||.-.
T Consensus 252 ~pD---Gk~l~v~n~ 263 (567)
T 1qks_A 252 GWE---DKYAIAGAY 263 (567)
T ss_dssp TCT---TTEEEEEEE
T ss_pred CCC---CCEEEEEEc
Confidence 43 457888643
No 120
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=82.80 E-value=17 Score=38.40 Aligned_cols=49 Identities=18% Similarity=0.315 Sum_probs=32.7
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..|+++|||. .|..+..+|.|++++. ++ +.++ ...........++|+|+
T Consensus 471 ~~~~~spd~~-~las~~~d~~i~iw~~--~~--~~~~-------------~~~~h~~~v~~l~~s~d 519 (577)
T 2ymu_A 471 RGVAFSPDGQ-TIASASDDKTVKLWNR--NG--QLLQ-------------TLTGHSSSVRGVAFSPD 519 (577)
T ss_dssp EEEEECTTSC-EEEEEETTSEEEEEET--TS--CEEE-------------EEECCSSCEEEEEECTT
T ss_pred EEEEEcCCCC-EEEEEeCCCEEEEEcC--CC--CEEE-------------EEeCCCCCEEEEEEcCC
Confidence 6799999995 5556678999999863 22 2221 12233456789999984
No 121
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=82.71 E-value=14 Score=37.45 Aligned_cols=61 Identities=8% Similarity=0.058 Sum_probs=38.9
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..++|.||+ +++++..+|.|+++++. .+. .+.+ + .....+-+.....++|+| +|.+.++-+
T Consensus 86 ~~~~~s~d~--~l~~~s~dg~v~lWd~~-~~~--~~~~--------~-~~~~~~H~~~V~~v~~sp----dg~~l~sgs 146 (344)
T 4gqb_B 86 ADLTWVGER--GILVASDSGAVELWELD-ENE--TLIV--------S-KFCKYEHDDIVSTVSVLS----SGTQAVSGS 146 (344)
T ss_dssp EEEEEETTT--EEEEEETTSEEEEEEEC-TTS--SCEE--------E-EEEEECCSSCEEEEEECT----TSSEEEEEE
T ss_pred EEEEEeCCC--eEEEEECCCEEEEEecc-CCC--ceeE--------e-eccccCCCCCEEEEEECC----CCCEEEEEe
Confidence 678999997 79999999999999863 222 1110 0 111223355688999998 455545433
No 122
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=82.42 E-value=24 Score=34.98 Aligned_cols=26 Identities=12% Similarity=0.181 Sum_probs=21.8
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
..++++|||. .++.+..+|.|+++++
T Consensus 230 ~~v~~~p~~~-~l~s~s~d~~v~iwd~ 255 (340)
T 1got_B 230 NAICFFPNGN-AFATGSDDATCRLFDL 255 (340)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEET
T ss_pred EEEEEcCCCC-EEEEEcCCCcEEEEEC
Confidence 6799999995 6777778999999975
No 123
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=82.03 E-value=30 Score=35.06 Aligned_cols=74 Identities=11% Similarity=0.125 Sum_probs=41.0
Q ss_pred CCcEEEEEeeCce-eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCC
Q 006811 138 QGLCLEKIGNGSY-LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHP 216 (630)
Q Consensus 138 ~G~~le~va~Gl~-~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhP 216 (630)
.+-++.++...-. ..++|.||| +++++--.+.+.++... .+. .+. ..+.......+..++|+|
T Consensus 166 ~~~~~~~~~~~~~V~~v~fspdg--~~l~s~s~~~~~~~~~~-~~~--~~~-----------~~~~~~~~~~v~~v~fsp 229 (365)
T 4h5i_A 166 DLTEKFEIETRGEVKDLHFSTDG--KVVAYITGSSLEVISTV-TGS--CIA-----------RKTDFDKNWSLSKINFIA 229 (365)
T ss_dssp TTEEEEEEECSSCCCEEEECTTS--SEEEEECSSCEEEEETT-TCC--EEE-----------EECCCCTTEEEEEEEEEE
T ss_pred CCcEEEEeCCCCceEEEEEccCC--ceEEeccceeEEEEEec-cCc--cee-----------eeecCCCCCCEEEEEEcC
Confidence 3445555543333 789999999 46666556666666532 222 110 001111233467899998
Q ss_pred CCCCCCEEEEEEeec
Q 006811 217 NFAKNGRFFASFNCD 231 (630)
Q Consensus 217 dF~~Ng~~YvsYs~~ 231 (630)
++.+.++-+.+
T Consensus 230 ----dg~~l~~~s~d 240 (365)
T 4h5i_A 230 ----DDTVLIAASLK 240 (365)
T ss_dssp ----TTEEEEEEEES
T ss_pred ----CCCEEEEEecC
Confidence 57777766654
No 124
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=81.28 E-value=31 Score=33.94 Aligned_cols=49 Identities=24% Similarity=0.430 Sum_probs=32.7
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..++++|||. .|..+..+|.|+++++. +++.+. . ...+.....++|+|+
T Consensus 200 ~~~~~sp~g~-~l~s~~~dg~i~iwd~~---~~~~~~------------~--~~~~~~v~~~~~sp~ 248 (319)
T 3frx_A 200 NTLTASPDGT-LIASAGKDGEIMLWNLA---AKKAMY------------T--LSAQDEVFSLAFSPN 248 (319)
T ss_dssp EEEEECTTSS-EEEEEETTCEEEEEETT---TTEEEE------------E--EECCSCEEEEEECSS
T ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEECC---CCcEEE------------E--ecCCCcEEEEEEcCC
Confidence 6799999995 56666789999999752 122221 1 112345789999984
No 125
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=81.00 E-value=15 Score=37.28 Aligned_cols=59 Identities=14% Similarity=0.106 Sum_probs=38.2
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..++|+|||. +|+.+..+|.|+++++. . ++.+. ...+-......++|+|+ +..++++-+
T Consensus 131 ~~v~~spdg~-~l~sgs~d~~i~iwd~~-~--~~~~~-------------~~~~h~~~V~~~~~~~~---~~~~l~s~s 189 (344)
T 4gqb_B 131 STVSVLSSGT-QAVSGSKDICIKVWDLA-Q--QVVLS-------------SYRAHAAQVTCVAASPH---KDSVFLSCS 189 (344)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETT-T--TEEEE-------------EECCCSSCEEEEEECSS---CTTEEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCeEEEEECC-C--CcEEE-------------EEcCcCCceEEEEecCC---CCCceeeec
Confidence 7899999995 67777789999999752 2 22221 12223456788999984 234555544
No 126
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=80.51 E-value=36 Score=33.71 Aligned_cols=27 Identities=22% Similarity=0.212 Sum_probs=22.0
Q ss_pred eeEEEcCCCCceEEEEecC---ceEEEEEcc
Q 006811 151 LNMVAHPDGSNRAFFSNQE---GKIWLATIP 178 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~---G~V~~~~~p 178 (630)
..+++.|||. .++++..+ |.|+++++.
T Consensus 237 ~~i~~~~~~~-~l~~~~~d~~~g~i~i~d~~ 266 (397)
T 1sq9_A 237 RSVKFSPQGS-LLAIAHDSNSFGCITLYETE 266 (397)
T ss_dssp EEEEECSSTT-EEEEEEEETTEEEEEEEETT
T ss_pred ceEEECCCCC-EEEEEecCCCCceEEEEECC
Confidence 7899999985 57777778 999999853
No 127
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=80.46 E-value=40 Score=32.21 Aligned_cols=26 Identities=12% Similarity=0.202 Sum_probs=21.1
Q ss_pred eeEEEcCCCCceEEEEec-CceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQ-EGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq-~G~V~~~~~ 177 (630)
..+++.|||. ++|++.. .+.|+++++
T Consensus 37 ~~~~~s~dg~-~l~v~~~~~~~v~~~d~ 63 (337)
T 1pby_B 37 MVPMVAPGGR-IAYATVNKSESLVKIDL 63 (337)
T ss_dssp CCEEECTTSS-EEEEEETTTTEEEEEET
T ss_pred cceEEcCCCC-EEEEEeCCCCeEEEEEC
Confidence 6789999995 6788775 689999874
No 128
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=80.04 E-value=52 Score=32.98 Aligned_cols=25 Identities=8% Similarity=-0.061 Sum_probs=20.4
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
..++++|||. +||++... .|.++++
T Consensus 43 ~~~a~spdg~-~l~~~~~~-~v~~~~~ 67 (365)
T 1jof_A 43 SWMTFDHERK-NIYGAAMK-KWSSFAV 67 (365)
T ss_dssp SEEEECTTSS-EEEEEEBT-EEEEEEE
T ss_pred cEEEECCCCC-EEEEEccc-eEEEEEE
Confidence 6789999995 68888876 8888875
No 129
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=79.99 E-value=27 Score=35.06 Aligned_cols=59 Identities=14% Similarity=0.172 Sum_probs=37.3
Q ss_pred eeEEEcCCCCceEEEEecCce-EEEEEccCCCCCceeeecCCCCCcCCccceeeC-CCCceeeeeeCCCCCCCCEEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQEGK-IWLATIPEQGLGETMELDASSPFADLTDEVHFD-TEFGLMGMAFHPNFAKNGRFFASF 228 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~-V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~-~e~GLLGiAfhPdF~~Ng~~YvsY 228 (630)
..++++|||. .|..+..+|. |+++++. . ++.+. .+..+ .......++|+|+ |.+.++-
T Consensus 199 ~~~~~s~~g~-~l~s~s~d~~~v~iwd~~-~--~~~~~------------~~~~g~h~~~v~~~~~s~~----~~~l~s~ 258 (355)
T 3vu4_A 199 KMVRLNRKSD-MVATCSQDGTIIRVFKTE-D--GVLVR------------EFRRGLDRADVVDMKWSTD----GSKLAVV 258 (355)
T ss_dssp EEEEECTTSS-EEEEEETTCSEEEEEETT-T--CCEEE------------EEECTTCCSCEEEEEECTT----SCEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCCEEEEEECC-C--CcEEE------------EEEcCCCCCcEEEEEECCC----CCEEEEE
Confidence 7899999995 5666678998 9999753 2 22221 11112 3456889999984 5554444
Q ss_pred e
Q 006811 229 N 229 (630)
Q Consensus 229 s 229 (630)
+
T Consensus 259 s 259 (355)
T 3vu4_A 259 S 259 (355)
T ss_dssp E
T ss_pred E
Confidence 3
No 130
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=79.91 E-value=28 Score=35.93 Aligned_cols=63 Identities=10% Similarity=0.002 Sum_probs=38.4
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..++++|++.+.++....+|.|+++++...... .+. ........+...|+|+|+ ..+++++-+
T Consensus 235 ~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~--------~~~-----~~~~~~~~~v~~i~~~p~---~~~~l~tg~ 297 (430)
T 2xyi_A 235 EDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS--------KPS-----HTVDAHTAEVNCLSFNPY---SEFILATGS 297 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCSCSS--------SCS-----EEEECCSSCEEEEEECSS---CTTEEEEEE
T ss_pred eeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC--------cce-----eEeecCCCCeEEEEeCCC---CCCEEEEEe
Confidence 678999966545556667999999985321100 111 112234567899999984 334665544
No 131
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=79.85 E-value=38 Score=33.68 Aligned_cols=60 Identities=15% Similarity=0.117 Sum_probs=37.1
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..++|+|||. .|+.+..+|.|+++++. .+..+.+ ....+-+.....++|+|+ +.+.++-+
T Consensus 65 ~~~~~sp~g~-~l~s~s~D~~v~iw~~~-~~~~~~~-------------~~~~~h~~~v~~v~~sp~----~~~l~s~s 124 (345)
T 3fm0_A 65 RKVAWSPCGN-YLASASFDATTCIWKKN-QDDFECV-------------TTLEGHENEVKSVAWAPS----GNLLATCS 124 (345)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEEEC-CC-EEEE-------------EEECCCSSCEEEEEECTT----SSEEEEEE
T ss_pred EEEEECCCCC-EEEEEECCCcEEEEEcc-CCCeEEE-------------EEccCCCCCceEEEEeCC----CCEEEEEE
Confidence 6789999995 67777789999888642 2211111 112233456889999984 55544433
No 132
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=79.73 E-value=35 Score=34.18 Aligned_cols=27 Identities=7% Similarity=0.137 Sum_probs=23.1
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
..+++.|||...++.+..+|.|+++++
T Consensus 294 ~~~~~~~~~~~~l~~g~~dg~i~vwd~ 320 (420)
T 3vl1_A 294 NSLTVDGNNANYIYAGYENGMLAQWDL 320 (420)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred eeEEEeCCCCCEEEEEeCCCeEEEEEc
Confidence 789999999656777788999999985
No 133
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=79.51 E-value=38 Score=36.79 Aligned_cols=26 Identities=19% Similarity=0.266 Sum_probs=18.8
Q ss_pred eeEEEcCCCCceEEEEecC--------ceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQE--------GKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~--------G~V~~~~~ 177 (630)
...+++|||. +|+++... ..||++++
T Consensus 191 ~~~~~SpDG~-~la~~~~~~~~~~~~~~~i~~~d~ 224 (662)
T 3azo_A 191 TGPRLSPDGR-QAVWLAWDHPRMPWEGTELKTARV 224 (662)
T ss_dssp CCCEECTTSS-EEEEEEECTTCCTTTCEEEEEEEE
T ss_pred cCceECCCCC-EEEEEECCCCCCCCCCcEEEEEEE
Confidence 6688999996 56555533 47999875
No 134
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=78.98 E-value=26 Score=34.16 Aligned_cols=52 Identities=6% Similarity=0.024 Sum_probs=33.6
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..|++.|||. .++++..+|.|+++++. .+..+.+ ............++|+|+
T Consensus 12 ~~~~~s~~~~-~l~~~~~d~~v~i~~~~-~~~~~~~-------------~~~~~h~~~v~~~~~~~~ 63 (372)
T 1k8k_C 12 SCHAWNKDRT-QIAICPNNHEVHIYEKS-GNKWVQV-------------HELKEHNGQVTGVDWAPD 63 (372)
T ss_dssp CEEEECTTSS-EEEEECSSSEEEEEEEE-TTEEEEE-------------EEEECCSSCEEEEEEETT
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEeCC-CCcEEee-------------eeecCCCCcccEEEEeCC
Confidence 6789999994 56666689999999753 2210011 112234567889999983
No 135
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=78.80 E-value=30 Score=37.67 Aligned_cols=26 Identities=12% Similarity=0.158 Sum_probs=19.0
Q ss_pred eeEEEcCCCCceEEEEecC----------ceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQE----------GKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~----------G~V~~~~~ 177 (630)
..++++|||. +|+++..+ ..||++++
T Consensus 133 ~~~~~spDg~-~l~~~~~~~~~~~~~~~~~~i~~~~~ 168 (662)
T 3azo_A 133 ADPVLLPERG-EVWCMAEEFTGEGPSDVRRFLAAVPL 168 (662)
T ss_dssp EEEEEETTTT-EEEEEEEEECSSSTTCEEEEEEEEET
T ss_pred cCcEECCCCC-EEEEEEecccCCCCCCceeEEEEEEC
Confidence 6789999996 66655543 57888864
No 136
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=78.58 E-value=46 Score=31.49 Aligned_cols=72 Identities=10% Similarity=0.063 Sum_probs=39.6
Q ss_pred eeEEEcCC--CCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEE
Q 006811 151 LNMVAHPD--GSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFA 226 (630)
Q Consensus 151 ~~ma~~pD--Gs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Yv 226 (630)
..++++|+ |. .++++..+|.|+++++........+.+......+.+ ...........++++|+.....++.+
T Consensus 114 ~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~l~~ 187 (351)
T 3f3f_A 114 YSVKFAPAHLGL-KLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSI---PPANHLQSDFCLSWCPSRFSPEKLAV 187 (351)
T ss_dssp EEEEECCGGGCS-EEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSC---CCSSCSCCCEEEEECCCSSSCCEEEE
T ss_pred eEEEEcCCCCCc-EEEEecCCCcEEEecCCChHHhcccccccccccccc---ccCCcccceeEEEeccCCCCCcEEEE
Confidence 78999999 74 577778899999998633111111100000000000 01134567789999997544444444
No 137
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=78.17 E-value=30 Score=32.68 Aligned_cols=49 Identities=18% Similarity=0.253 Sum_probs=34.2
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..+++.|+| ++++...+|.|+++++.. ++.+ ............++|+|+
T Consensus 188 ~~~~~~~~~--~~~~~~~dg~i~i~d~~~---~~~~-------------~~~~~~~~~i~~~~~~~~ 236 (313)
T 3odt_A 188 RHLAVVDDG--HFISCSNDGLIKLVDMHT---GDVL-------------RTYEGHESFVYCIKLLPN 236 (313)
T ss_dssp EEEEEEETT--EEEEEETTSEEEEEETTT---CCEE-------------EEEECCSSCEEEEEECTT
T ss_pred EEEEEcCCC--eEEEccCCCeEEEEECCc---hhhh-------------hhhhcCCceEEEEEEecC
Confidence 678899999 588888999999997532 2221 112234556889999984
No 138
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=78.09 E-value=21 Score=36.90 Aligned_cols=60 Identities=20% Similarity=0.269 Sum_probs=36.6
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 227 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Yvs 227 (630)
..|+|+|...+-|.+...+|.|+++++. .+.... ++. ..+-.....+|+|+|. ++.+.++
T Consensus 123 ~~l~~~P~~~~~lasGs~dg~i~lWd~~-~~~~~~--------~~~-----~~gH~~~V~~l~f~p~---~~~~l~s 182 (435)
T 4e54_B 123 TSLAWHPTHPSTVAVGSKGGDIMLWNFG-IKDKPT--------FIK-----GIGAGGSITGLKFNPL---NTNQFYA 182 (435)
T ss_dssp EEEEECSSCTTCEEEEETTSCEEEECSS-CCSCCE--------EEC-----CCSSSCCCCEEEECSS---CTTEEEE
T ss_pred EEEEEeCCCCCEEEEEeCCCEEEEEECC-CCCcee--------EEE-----ccCCCCCEEEEEEeCC---CCCEEEE
Confidence 6799999665456677889999999752 222111 011 1122456789999983 4544443
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=78.07 E-value=49 Score=31.58 Aligned_cols=48 Identities=10% Similarity=0.038 Sum_probs=26.8
Q ss_pred EEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCc-eeeeeeCCCCCCCCEEEEEE
Q 006811 163 AFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFG-LMGMAFHPNFAKNGRFFASF 228 (630)
Q Consensus 163 lfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~G-LLGiAfhPdF~~Ng~~YvsY 228 (630)
++.....|.|++++. +. ++.+. .+......+ ..+++|+|+ ..++|+.-
T Consensus 4 ~v~~~~~~~v~~~d~-~~--~~~~~------------~~~~~~~~~~~~~~~~s~d---g~~l~v~~ 52 (337)
T 1pby_B 4 ILAPARPDKLVVIDT-EK--MAVDK------------VITIADAGPTPMVPMVAPG---GRIAYATV 52 (337)
T ss_dssp EEEEETTTEEEEEET-TT--TEEEE------------EEECTTCTTCCCCEEECTT---SSEEEEEE
T ss_pred EEEcCCCCeEEEEEC-CC--CcEEE------------EEEcCCCCCCccceEEcCC---CCEEEEEe
Confidence 444456899999874 22 22221 122223333 788999984 33677754
No 140
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=77.90 E-value=30 Score=34.22 Aligned_cols=64 Identities=17% Similarity=0.187 Sum_probs=34.4
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 228 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsY 228 (630)
..++|+|||. .|..+..+|.|+++++.+ ...... . ... ..+..+-+.....++|+|+ |.+.++=
T Consensus 62 ~~v~~sp~~~-~las~s~D~~v~iw~~~~-~~~~~~------~-~~~-~~~~~~h~~~V~~v~~sp~----g~~las~ 125 (330)
T 2hes_X 62 RSVAWRPHTS-LLAAGSFDSTVSIWAKEE-SADRTF------E-MDL-LAIIEGHENEVKGVAWSND----GYYLATC 125 (330)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEEC--------C------C-CEE-EEEEC----CEEEEEECTT----SCEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCcEEEEEccc-CcCccc------c-cee-EEEEcCCCCcEEEEEECCC----CCEEEEE
Confidence 6799999995 566677899999987522 110000 0 000 0122233456889999984 5544443
No 141
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=77.82 E-value=53 Score=31.86 Aligned_cols=52 Identities=13% Similarity=0.222 Sum_probs=35.0
Q ss_pred eeEEEcCC--CCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPD--GSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pD--Gs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..++++|+ |. .++++..+|.|+++++.. +... ..............++|+|.
T Consensus 105 ~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~-~~~~-------------~~~~~~~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 105 NSVQWAPHEYGP-LLLVASSDGKVSVVEFKE-NGTT-------------SPIIIDAHAIGVNSASWAPA 158 (379)
T ss_dssp EEEEECCGGGCS-EEEEEETTSEEEEEECCT-TSCC-------------CEEEEECCTTCEEEEEECCC
T ss_pred EEEEeCCCCCCC-EEEEecCCCcEEEEecCC-CCce-------------eeEEecCCCCceEEEEEcCc
Confidence 78999999 64 678888899999997532 2100 01122344567899999985
No 142
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=77.53 E-value=16 Score=40.16 Aligned_cols=25 Identities=16% Similarity=0.205 Sum_probs=19.7
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
..++|+|||. ++++..+|.|+++++
T Consensus 20 ~~~~~spdg~--~~~~~~dg~i~~~d~ 44 (723)
T 1xfd_A 20 PEAKWISDTE--FIYREQKGTVRLWNV 44 (723)
T ss_dssp CCCCBSSSSC--BCCCCSSSCEEEBCG
T ss_pred cccEEcCCCc--EEEEeCCCCEEEEEC
Confidence 5678999994 555678899999864
No 143
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=77.40 E-value=52 Score=32.56 Aligned_cols=25 Identities=24% Similarity=0.327 Sum_probs=17.2
Q ss_pred EEEcCCCCceEEEEecCc--eEEEEEc
Q 006811 153 MVAHPDGSNRAFFSNQEG--KIWLATI 177 (630)
Q Consensus 153 ma~~pDGs~RlfV~eq~G--~V~~~~~ 177 (630)
.+++|||..-+|+.++.| .||++++
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~ 67 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDL 67 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEET
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeC
Confidence 678999963344454467 5998874
No 144
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=77.29 E-value=6.6 Score=42.70 Aligned_cols=73 Identities=14% Similarity=0.044 Sum_probs=50.1
Q ss_pred eeEEEcCCCCceEEEEec------------------CceEEEEEccCCCC--CceeeecCCCCCcCC---ccceeeCCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQ------------------EGKIWLATIPEQGL--GETMELDASSPFADL---TDEVHFDTEF 207 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq------------------~G~V~~~~~p~~gs--g~~l~~~~~~pflDi---~~~V~~~~e~ 207 (630)
-.|+|.||| .|||+-- .|+|++++ ++ |+ +....|....||.+- ..+|++.+-|
T Consensus 142 ~~l~fgpDG--~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~-~d-g~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~R 217 (463)
T 2wg3_C 142 GQLLFGPDG--FLYIILGDGMITLDDMEEMDGLSDFTGSVLRLD-VD-TDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLH 217 (463)
T ss_dssp EEEEECTTS--CEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEB-CC-CCCSSCSCBCCTTSTTTTCSSSCTTEEEECCS
T ss_pred CcEeECCCC--cEEEEeCCCCCCCCccccccCcCCCCeeEEEEE-CC-CCcccccCcCCCCCCCcCCCCCcccEEEECCC
Confidence 679999999 6999831 48899886 33 32 111123356788764 4589999999
Q ss_pred ceeeeeeCCCCC-CCCEEEEE
Q 006811 208 GLMGMAFHPNFA-KNGRFFAS 227 (630)
Q Consensus 208 GLLGiAfhPdF~-~Ng~~Yvs 227 (630)
-..||||||.=. -||.++++
T Consensus 218 Np~gla~dp~tg~~~G~l~~~ 238 (463)
T 2wg3_C 218 DPGRCAVDRHPTDININLTIL 238 (463)
T ss_dssp SCCBEEEESSCSSTTCSEEEE
T ss_pred CcceEEECCCCCCcccceEEE
Confidence 999999999532 14655554
No 145
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=77.13 E-value=37 Score=36.03 Aligned_cols=69 Identities=12% Similarity=0.027 Sum_probs=43.5
Q ss_pred EEEEEeeCceeeEEEcCCCCceEEEEe----------cCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCC-----
Q 006811 141 CLEKIGNGSYLNMVAHPDGSNRAFFSN----------QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDT----- 205 (630)
Q Consensus 141 ~le~va~Gl~~~ma~~pDGs~RlfV~e----------q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~----- 205 (630)
.+.+|..|..-.|+++|||. ++||++ +.+.|.+++. . +.+.+ ..+....
T Consensus 71 v~~~I~vG~~P~va~spDG~-~lyVan~~~~r~~~G~~~~~VsviD~-~--t~~v~------------~~I~v~~g~r~~ 134 (386)
T 3sjl_D 71 VIGMIDGGFLPNPVVADDGS-FIAHASTVFSRIARGERTDYVEVFDP-V--TLLPT------------ADIELPDAPRFL 134 (386)
T ss_dssp EEEEEEECSSCEEEECTTSS-CEEEEEEEEEETTEEEEEEEEEEECT-T--TCCEE------------EEEEETTCCCCC
T ss_pred EEEEEECCCCCcEEECCCCC-EEEEEcccccccccCCCCCEEEEEEC-C--CCeEE------------EEEECCCccccc
Confidence 45566667664599999996 799997 3567888752 2 22221 1222221
Q ss_pred -CCceeeeeeCCCCCCCCEEEEEE
Q 006811 206 -EFGLMGMAFHPNFAKNGRFFASF 228 (630)
Q Consensus 206 -e~GLLGiAfhPdF~~Ng~~YvsY 228 (630)
....-+++|+|| ..++||+-
T Consensus 135 ~g~~P~~~a~spD---Gk~lyVan 155 (386)
T 3sjl_D 135 VGTYPWMTSLTPD---GKTLLFYQ 155 (386)
T ss_dssp BSCCGGGEEECTT---SSEEEEEE
T ss_pred cCCCCceEEEcCC---CCEEEEEE
Confidence 124678999985 45788863
No 146
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=76.87 E-value=21 Score=38.94 Aligned_cols=59 Identities=14% Similarity=0.154 Sum_probs=39.3
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..++|+||+..++..+..+|.|++++.+ . ++.+ ....+-+.....++|+|+ |.+.++-+
T Consensus 151 ~~v~f~p~~~~~l~s~s~D~~v~lwd~~-~--~~~~-------------~~l~~H~~~V~~v~fspd----g~~las~s 209 (611)
T 1nr0_A 151 NSVDFKPSRPFRIISGSDDNTVAIFEGP-P--FKFK-------------STFGEHTKFVHSVRYNPD----GSLFASTG 209 (611)
T ss_dssp EEEEECSSSSCEEEEEETTSCEEEEETT-T--BEEE-------------EEECCCSSCEEEEEECTT----SSEEEEEE
T ss_pred eEEEECCCCCeEEEEEeCCCeEEEEECC-C--CeEe-------------eeeccccCceEEEEECCC----CCEEEEEE
Confidence 6789999997667778889999998742 1 1111 112233456889999994 55655444
No 147
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=76.82 E-value=23 Score=35.99 Aligned_cols=58 Identities=16% Similarity=0.355 Sum_probs=38.3
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..+++.|||. +++.+..+|.|+++++. .+ +.. .....+.+...++++|. ++.+.++-+
T Consensus 169 ~~~~~~p~~~-~l~s~s~d~~v~iwd~~-~~--~~~--------------~~~~~~~~v~~~~~~~~---~~~~l~~~s 226 (393)
T 1erj_A 169 YSLDYFPSGD-KLVSGSGDRTVRIWDLR-TG--QCS--------------LTLSIEDGVTTVAVSPG---DGKYIAAGS 226 (393)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETT-TT--EEE--------------EEEECSSCEEEEEECST---TCCEEEEEE
T ss_pred EEEEEcCCCC-EEEEecCCCcEEEEECC-CC--eeE--------------EEEEcCCCcEEEEEECC---CCCEEEEEc
Confidence 7899999995 67777889999999752 22 211 11123456888999983 555555443
No 148
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=76.76 E-value=70 Score=36.06 Aligned_cols=71 Identities=14% Similarity=0.134 Sum_probs=43.7
Q ss_pred eeEEcCCCCeEEEEe-CCCCCCCCcccccccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCCCCeE
Q 006811 310 QLLFGPTDGYMYFMM-GDGGGTADPYNFSQNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGLQPEI 388 (630)
Q Consensus 310 ~L~FGp~DG~LYv~~-GDgg~~~DP~~~aQn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~~pEI 388 (630)
.|.|.+ +|.|||.+ +..+.. ..-.......|+|++++.. ....
T Consensus 480 nL~fd~-~G~LWf~TD~~~~~~------g~~~~~gnn~v~~~dp~tG-----------------------------el~~ 523 (592)
T 4a9v_A 480 GLGFDK-AGRLWILTDGDSSNA------GDFAGMGNNQMLCADPATG-----------------------------EIRR 523 (592)
T ss_dssp EEEECT-TCCEEEEECCCCCCS------GGGTTCCSCEEEEECTTTC-----------------------------CEEE
T ss_pred ceEECC-CCCEEEEeCCCcCcc------ccccccCCceEEEEeCCCC-----------------------------eEEE
Confidence 599999 99999965 332211 1111122347999988541 1234
Q ss_pred EEeccc--cceeeeecCCCCCeeEEEeccCC
Q 006811 389 WALGLR--NPWRCSFDSDRPSYFMCADVGQD 417 (630)
Q Consensus 389 ~A~GlR--NP~r~afD~~~g~~l~~~DvG~d 417 (630)
++.|.. -|-|++|.|+. .+||++-.-+.
T Consensus 524 fl~~P~~aEpnGiafSPD~-ktLfV~vQHPG 553 (592)
T 4a9v_A 524 FMVGPIGCEVTGISFSPDQ-KTLFVGIQHPG 553 (592)
T ss_dssp EEECCTTCEEEEEEECTTS-SEEEEEEESTT
T ss_pred EEeCCCCccccCCEECCCC-CEEEEEEeCCC
Confidence 555432 36899999975 47999876553
No 149
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=76.45 E-value=54 Score=31.20 Aligned_cols=54 Identities=11% Similarity=0.155 Sum_probs=32.7
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..|++.|||. ++++-.+|.|+++++.. +. . ..++..+ .....+.....++|+|+
T Consensus 55 ~~~~~~~~~~--~l~~~~dg~i~iw~~~~-~~--~-----~~~~~~~---~~~~~~~~v~~~~~~~~ 108 (337)
T 1gxr_A 55 CAVTISNPTR--HVYTGGKGCVKVWDISH-PG--N-----KSPVSQL---DCLNRDNYIRSCKLLPD 108 (337)
T ss_dssp CEEEECSSSS--EEEEECBSEEEEEETTS-TT--C-----CSCSEEE---ECSCTTSBEEEEEECTT
T ss_pred EEEEEecCCc--EEEEcCCCeEEEEECCC-CC--c-----eeeeecc---cccCCCCcEEEEEEcCC
Confidence 7899999994 55444499999998632 21 1 1111111 01134566889999984
No 150
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=75.84 E-value=46 Score=32.04 Aligned_cols=52 Identities=8% Similarity=0.072 Sum_probs=35.0
Q ss_pred eeEEEcCCC--CceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCC
Q 006811 151 LNMVAHPDG--SNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHP 216 (630)
Q Consensus 151 ~~ma~~pDG--s~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhP 216 (630)
..|+++||+ .+.|+.+..+|.|+++++...+ ..+ .......+.....++|+|
T Consensus 43 ~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~--~~~------------~~~~~~h~~~v~~~~~~~ 96 (368)
T 3mmy_A 43 GCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG--QTI------------PKAQQMHTGPVLDVCWSD 96 (368)
T ss_dssp EEEEECCTTSSSEEEEEEETTSEEEEEEECTTS--CEE------------EEEEEECSSCEEEEEECT
T ss_pred EEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC--cee------------EEEeccccCCEEEEEECc
Confidence 678999994 3467777889999999864212 111 012233466789999998
No 151
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=75.73 E-value=70 Score=32.15 Aligned_cols=57 Identities=19% Similarity=0.221 Sum_probs=35.7
Q ss_pred eeEEEcC-CCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHP-DGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~p-DGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..|++.| |+ +.|+.+..+|.|++++++..+.... ...+ .............++|||+
T Consensus 85 ~~~~~~p~~~-~~l~s~s~dg~v~vw~~~~~~~~~~----~~~~-----~~~~~~h~~~v~~~~~~p~ 142 (402)
T 2aq5_A 85 LDIAWCPHND-NVIASGSEDCTVMVWEIPDGGLVLP----LREP-----VITLEGHTKRVGIVAWHPT 142 (402)
T ss_dssp EEEEECTTCT-TEEEEEETTSEEEEEECCTTCCSSC----BCSC-----SEEEECCSSCEEEEEECSS
T ss_pred EEEEeCCCCC-CEEEEEeCCCeEEEEEccCCCCccc----cCCc-----eEEecCCCCeEEEEEECcC
Confidence 6789999 66 4777778899999998643211000 0011 1222344567899999985
No 152
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=75.67 E-value=50 Score=30.47 Aligned_cols=25 Identities=24% Similarity=0.363 Sum_probs=19.9
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
..++++|||. .++....|.|+++++
T Consensus 45 ~~~~~spdg~--~l~~~~~~~i~~~d~ 69 (297)
T 2ojh_A 45 EAPNWSPDGK--YLLLNSEGLLYRLSL 69 (297)
T ss_dssp EEEEECTTSS--EEEEEETTEEEEEES
T ss_pred EeeEECCCCC--EEEEEcCCeEEEEeC
Confidence 7899999994 555556899999875
No 153
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=75.41 E-value=24 Score=35.18 Aligned_cols=61 Identities=11% Similarity=0.179 Sum_probs=38.5
Q ss_pred eeEEEcCCCCceEEEEecCc---eEEEEEccCCCCCceeeecCCCCCcCCccceee-CCCCceeeeeeCCCCCCCCEEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQEG---KIWLATIPEQGLGETMELDASSPFADLTDEVHF-DTEFGLMGMAFHPNFAKNGRFFA 226 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G---~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~-~~e~GLLGiAfhPdF~~Ng~~Yv 226 (630)
..|+++|||...+++...+| .|+++++.. +. ..+ .... ........++|+|+ ++.+++
T Consensus 218 ~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~-~~-~~~-------------~~~~~~~~~~v~~~~~s~~---~~~~l~ 279 (416)
T 2pm9_A 218 SVVEWHPKNSTRVATATGSDNDPSILIWDLRN-AN-TPL-------------QTLNQGHQKGILSLDWCHQ---DEHLLL 279 (416)
T ss_dssp EEEEECSSCTTEEEEEECCSSSCCCCEEETTS-TT-SCS-------------BCCCSCCSSCEEEEEECSS---CSSCEE
T ss_pred EEEEECCCCCCEEEEEECCCCCceEEEEeCCC-CC-CCc-------------EEeecCccCceeEEEeCCC---CCCeEE
Confidence 78999999875677777787 999987532 11 111 1111 33567899999983 444554
Q ss_pred EEe
Q 006811 227 SFN 229 (630)
Q Consensus 227 sYs 229 (630)
+-+
T Consensus 280 s~~ 282 (416)
T 2pm9_A 280 SSG 282 (416)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 154
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=75.38 E-value=79 Score=32.61 Aligned_cols=26 Identities=19% Similarity=0.346 Sum_probs=18.6
Q ss_pred eeEEEcCCCCceEE-EEecCc--eEEEEEc
Q 006811 151 LNMVAHPDGSNRAF-FSNQEG--KIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~Rlf-V~eq~G--~V~~~~~ 177 (630)
..++|+|||. +|+ ...++| .||++++
T Consensus 226 ~~~~~spdg~-~la~~~~~~g~~~i~~~d~ 254 (415)
T 2hqs_A 226 GAPAFSPDGS-KLAFALSKTGSLNLYVMDL 254 (415)
T ss_dssp EEEEECTTSS-EEEEEECTTSSCEEEEEET
T ss_pred cCEEEcCCCC-EEEEEEecCCCceEEEEEC
Confidence 7899999995 455 445554 4998874
No 155
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=75.30 E-value=61 Score=35.49 Aligned_cols=16 Identities=25% Similarity=0.223 Sum_probs=12.0
Q ss_pred eeEEEcCCCCceEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSN 167 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~e 167 (630)
..++++|||. +|+++.
T Consensus 184 ~~~~~SpDg~-~la~~~ 199 (706)
T 2z3z_A 184 KGTFWSPKGS-CLAFYR 199 (706)
T ss_dssp CSEEECTTSS-EEEEEE
T ss_pred ceEEECCCCC-EEEEEE
Confidence 5789999996 566654
No 156
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=75.09 E-value=52 Score=32.48 Aligned_cols=25 Identities=8% Similarity=0.112 Sum_probs=22.4
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
..|++.||| .+++...+|.|+++++
T Consensus 190 ~~~~~~~~~--~l~~~~~dg~i~i~d~ 214 (397)
T 1sq9_A 190 TSVDISERG--LIATGFNNGTVQISEL 214 (397)
T ss_dssp CEEEECTTS--EEEEECTTSEEEEEET
T ss_pred eEEEECCCc--eEEEEeCCCcEEEEEC
Confidence 789999999 7888889999999985
No 157
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=74.12 E-value=65 Score=31.88 Aligned_cols=60 Identities=15% Similarity=0.130 Sum_probs=38.7
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCcccee-eCCCCceeeeeeCCCCCCCCEEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVH-FDTEFGLMGMAFHPNFAKNGRFFASF 228 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~-~~~e~GLLGiAfhPdF~~Ng~~YvsY 228 (630)
..+++.|||.+.++.+..+|.|+++++.. +. ... ... ........+++|+|+ ++.+.++-
T Consensus 77 ~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~--~~~------------~~~~~~h~~~v~~~~~~~~---~~~~l~s~ 137 (383)
T 3ei3_B 77 TSLEWHPTHPTTVAVGSKGGDIILWDYDV-QN--KTS------------FIQGMGPGDAITGMKFNQF---NTNQLFVS 137 (383)
T ss_dssp EEEEECSSCTTEEEEEEBTSCEEEEETTS-TT--CEE------------EECCCSTTCBEEEEEEETT---EEEEEEEE
T ss_pred EEEEECCCCCCEEEEEcCCCeEEEEeCCC-cc--cce------------eeecCCcCCceeEEEeCCC---CCCEEEEE
Confidence 78999999955788888899999998532 21 110 111 134567889999983 34444433
No 158
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=73.72 E-value=27 Score=34.52 Aligned_cols=54 Identities=9% Similarity=0.110 Sum_probs=33.5
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..++++|||. .++++..+|.|+++++.. +. .. .+...+....+.....++|+|+
T Consensus 104 ~~~~~~~~~~-~l~~~~~d~~i~iwd~~~-~~--~~---------~~~~~~~~~h~~~v~~~~~~~~ 157 (377)
T 3dwl_C 104 TFVRWSPNED-KFAVGSGARVISVCYFEQ-EN--DW---------WVSKHLKRPLRSTILSLDWHPN 157 (377)
T ss_dssp EEEECCTTSS-CCEEEESSSCEEECCC--------C---------CCCEEECSSCCSCEEEEEECTT
T ss_pred EEEEECCCCC-EEEEEecCCeEEEEEECC-cc--cc---------eeeeEeecccCCCeEEEEEcCC
Confidence 7889999985 688888899999986422 21 10 0001111113567889999984
No 159
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=73.71 E-value=66 Score=30.94 Aligned_cols=50 Identities=8% Similarity=0.006 Sum_probs=34.2
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..|+++|||. .++++..+|.|+++++. ++ +.+ ............++|+|+
T Consensus 36 ~~~~~s~~~~-~l~~~~~dg~i~vwd~~-~~--~~~-------------~~~~~h~~~v~~~~~~~~ 85 (369)
T 3zwl_B 36 TQVKYNKEGD-LLFSCSKDSSASVWYSL-NG--ERL-------------GTLDGHTGTIWSIDVDCF 85 (369)
T ss_dssp EEEEECTTSC-EEEEEESSSCEEEEETT-TC--CEE-------------EEECCCSSCEEEEEECTT
T ss_pred EEEEEcCCCC-EEEEEeCCCEEEEEeCC-Cc--hhh-------------hhhhhcCCcEEEEEEcCC
Confidence 7899999995 57777789999999753 22 221 111233556889999983
No 160
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=73.69 E-value=22 Score=34.45 Aligned_cols=55 Identities=7% Similarity=0.062 Sum_probs=34.6
Q ss_pred eeEEEcC---CCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHP---DGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~p---DGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..+++.| +|. .++++..+|.|+++++.. + +.+ ..+...........+..++|+|+
T Consensus 213 ~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~--~~~--------~~~~~~~~~~~~~~v~~~~~~~~ 270 (357)
T 3i2n_A 213 CSLEFDRKDISMN-KLVATSLEGKFHVFDMRT-Q--HPT--------KGFASVSEKAHKSTVWQVRHLPQ 270 (357)
T ss_dssp EEEEESCSSSSCC-EEEEEESTTEEEEEEEEE-E--ETT--------TEEEEEEEECCSSCEEEEEEETT
T ss_pred EEEEcCCCCCCCC-EEEEECCCCeEEEEeCcC-C--Ccc--------cceeeeccCCCcCCEEEEEECCC
Confidence 7889999 775 688888899999987532 1 110 00000111244567899999984
No 161
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=73.69 E-value=23 Score=35.11 Aligned_cols=57 Identities=11% Similarity=0.192 Sum_probs=34.5
Q ss_pred eeEEEcC--CCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 006811 151 LNMVAHP--DGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 227 (630)
Q Consensus 151 ~~ma~~p--DGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Yvs 227 (630)
..|+++| +|. .++.+..+|.|+++++. .+ +.+.+ ........+..++|||+ |.+.++
T Consensus 129 ~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~-~~--~~~~~------------~~~~~~~~i~~~~~~pd----g~~las 187 (343)
T 3lrv_A 129 IYMYGHNEVNTE-YFIWADNRGTIGFQSYE-DD--SQYIV------------HSAKSDVEYSSGVLHKD----SLLLAL 187 (343)
T ss_dssp EEEECCC---CC-EEEEEETTCCEEEEESS-SS--CEEEE------------ECCCSSCCCCEEEECTT----SCEEEE
T ss_pred EEEEcCCCCCCC-EEEEEeCCCcEEEEECC-CC--cEEEE------------EecCCCCceEEEEECCC----CCEEEE
Confidence 7799999 884 44557789999999853 22 22110 01122345889999984 555544
No 162
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=73.38 E-value=1.1e+02 Score=33.36 Aligned_cols=16 Identities=25% Similarity=0.465 Sum_probs=11.6
Q ss_pred eeEEEcCCCCceEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSN 167 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~e 167 (630)
..++++|||. +|+++.
T Consensus 176 ~~~~~SpDg~-~la~~~ 191 (723)
T 1xfd_A 176 IAHWWSPDGT-RLAYAA 191 (723)
T ss_dssp EEEEECTTSS-EEEEEE
T ss_pred ceEEECCCCC-EEEEEE
Confidence 4699999996 555554
No 163
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=73.26 E-value=26 Score=34.96 Aligned_cols=27 Identities=11% Similarity=0.156 Sum_probs=22.6
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
..+++.||+.+.++.+..+|.|+++++
T Consensus 117 ~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 117 KTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred EEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 789999995557788888999999875
No 164
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=73.21 E-value=15 Score=37.29 Aligned_cols=57 Identities=16% Similarity=0.218 Sum_probs=34.2
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..++++|||. +|++-.+|.|+++++.. .++.+. .+++.+............++|+|+
T Consensus 181 ~~~~~~~~~~--~l~s~~d~~i~iwd~~~--~~~~~~------~~~~~~~~~~~~~~~v~~~~~~p~ 237 (447)
T 3dw8_B 181 NSISINSDYE--TYLSADDLRINLWHLEI--TDRSFN------IVDIKPANMEELTEVITAAEFHPN 237 (447)
T ss_dssp CEEEECTTSS--EEEEECSSEEEEEETTE--EEEEEE------EEECCCSSGGGCCCCEEEEEECSS
T ss_pred EEEEEcCCCC--EEEEeCCCeEEEEECCC--CCceee------eeecccccccccCcceEEEEECCC
Confidence 7899999984 55555899999998531 112221 112221112233456889999984
No 165
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=72.88 E-value=70 Score=31.00 Aligned_cols=64 Identities=11% Similarity=0.074 Sum_probs=37.0
Q ss_pred eeEEEcC-------------CCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHP-------------DGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~p-------------DGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..+++.| |+. .++++..+|.|+++++.. +.. ... + .............++|+|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~-~~~---------~-~~~~~~h~~~v~~~~~sp~ 217 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNS-DAQ-TYV---------L-ESTLEGHSDWVRDVAWSPT 217 (379)
T ss_dssp EEEEECCCC----------CTTC-EEEEEETTSCEEEEEEET-TTT-EEE---------E-EEEECCCSSCEEEEEECCC
T ss_pred EEEEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecC-CCc-cee---------e-EEEEecccCcEeEEEECCC
Confidence 6788999 563 677777899999987532 211 100 0 0111223456889999985
Q ss_pred CCCCCEEEEEE
Q 006811 218 FAKNGRFFASF 228 (630)
Q Consensus 218 F~~Ng~~YvsY 228 (630)
... +.+.++-
T Consensus 218 ~~~-~~~l~s~ 227 (379)
T 3jrp_A 218 VLL-RSYLASV 227 (379)
T ss_dssp CSS-SEEEEEE
T ss_pred CCC-CCeEEEE
Confidence 311 4444443
No 166
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=72.74 E-value=59 Score=29.96 Aligned_cols=40 Identities=18% Similarity=0.151 Sum_probs=23.1
Q ss_pred cceeeEEcCCCCe-EEEEeCCCCCCCCcccccccCCCCCeeEEEEecCC
Q 006811 307 HGGQLLFGPTDGY-MYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDN 354 (630)
Q Consensus 307 ~GG~L~FGp~DG~-LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg 354 (630)
....+.|.| ||. |++...+++... ......+.|..+|.++
T Consensus 218 ~~~~~~~s~-dg~~l~~~~~~~~~~~-------~~~~~~~~l~~~d~~~ 258 (297)
T 2ojh_A 218 GDWFPHPSP-SGDKVVFVSYDADVFD-------HPRDLDVRVQLMDMDG 258 (297)
T ss_dssp EEEEEEECT-TSSEEEEEEEETTCCS-------CCSSEEEEEEEEETTS
T ss_pred ccCCeEECC-CCCEEEEEEcCCCCCc-------ccccCceEEEEEecCC
Confidence 344689999 886 555554443211 1112346788888776
No 167
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=72.57 E-value=35 Score=37.80 Aligned_cols=50 Identities=12% Similarity=0.038 Sum_probs=34.8
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..++++|||. .+.++..+|.|+++++. . ++.+ ......+.....++|+|+
T Consensus 17 ~~i~~sp~~~-~la~~~~~g~v~iwd~~-~--~~~~-------------~~~~~~~~~v~~~~~s~~ 66 (814)
T 3mkq_A 17 KGIDFHPTEP-WVLTTLYSGRVEIWNYE-T--QVEV-------------RSIQVTETPVRAGKFIAR 66 (814)
T ss_dssp EEEEECSSSS-EEEEEETTSEEEEEETT-T--TEEE-------------EEEECCSSCEEEEEEEGG
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEECC-C--CceE-------------EEEecCCCcEEEEEEeCC
Confidence 7899999995 67777789999999752 2 2222 112234556789999984
No 168
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=71.96 E-value=54 Score=37.27 Aligned_cols=38 Identities=21% Similarity=0.514 Sum_probs=27.0
Q ss_pred ceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCC
Q 006811 308 GGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDN 354 (630)
Q Consensus 308 GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg 354 (630)
...+++.| ++.||+..+|+.. |+. + +..|.|+|.+..|
T Consensus 246 ~~~~~~~~-~~~l~~~~~d~~g---~y~--~---~~~g~v~~s~d~G 283 (737)
T 2cn3_A 246 PHHGVLAS-NGMLYITYGDTCG---PYD--G---NGKGQVWKFNTRT 283 (737)
T ss_dssp EEEEEECT-TSEEEEEEESSCC---SSC--C---SCCEEEEEEETTT
T ss_pred ceEEEECC-CCeEEEEecCCCC---ccc--c---ccCceEEEEeCCC
Confidence 34577899 9999999998642 221 1 3568899998665
No 169
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=71.52 E-value=87 Score=31.40 Aligned_cols=51 Identities=10% Similarity=0.053 Sum_probs=34.8
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCcccee-eCCCCceeeeeeCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVH-FDTEFGLMGMAFHP 216 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~-~~~e~GLLGiAfhP 216 (630)
..++++|||.+.++.+..+|.|+++++. . ++.+. .+. .........++|+|
T Consensus 135 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~--~~~~~------------~~~~~~~~~~v~~~~~~~ 186 (402)
T 2aq5_A 135 GIVAWHPTAQNVLLSAGCDNVILVWDVG-T--GAAVL------------TLGPDVHPDTIYSVDWSR 186 (402)
T ss_dssp EEEEECSSBTTEEEEEETTSCEEEEETT-T--TEEEE------------EECTTTCCSCEEEEEECT
T ss_pred EEEEECcCCCCEEEEEcCCCEEEEEECC-C--CCccE------------EEecCCCCCceEEEEECC
Confidence 7899999986567778889999999853 2 22211 110 12345678999998
No 170
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=71.34 E-value=80 Score=31.04 Aligned_cols=61 Identities=18% Similarity=0.282 Sum_probs=37.5
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCC-ceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLG-ETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg-~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..++|+|||. .|+.+..+|.|+++++.+.+.. +.+ .+...-......++|+|+ +.+.++-+
T Consensus 111 ~~v~~sp~g~-~las~s~D~~v~iwd~~~~~~~~~~~-------------~~~~~h~~~v~~v~~~p~----~~~l~s~s 172 (330)
T 2hes_X 111 KGVAWSNDGY-YLATCSRDKSVWIWETDESGEEYECI-------------SVLQEHSQDVKHVIWHPS----EALLASSS 172 (330)
T ss_dssp EEEEECTTSC-EEEEEETTSCEEEEECCTTCCCCEEE-------------EEECCCSSCEEEEEECSS----SSEEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEeccCCCCCeEEE-------------EEeccCCCceEEEEECCC----CCEEEEEc
Confidence 6899999995 5666678999999975322110 110 112233456889999994 44444433
No 171
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=71.08 E-value=72 Score=30.26 Aligned_cols=49 Identities=8% Similarity=0.089 Sum_probs=33.8
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..++++|||. .++++..+|.|+++++.. + +.. .....+.....++|+|+
T Consensus 228 ~~~~~s~~~~-~l~~~~~~~~i~~~~~~~-~--~~~--------------~~~~~~~~v~~~~~~~~ 276 (337)
T 1gxr_A 228 FSLGYCPTGE-WLAVGMESSNVEVLHVNK-P--DKY--------------QLHLHESCVLSLKFAYC 276 (337)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETTS-S--CEE--------------EECCCSSCEEEEEECTT
T ss_pred EEEEECCCCC-EEEEEcCCCcEEEEECCC-C--CeE--------------EEcCCccceeEEEECCC
Confidence 7789999995 677788899999987532 1 111 11233556889999984
No 172
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=71.00 E-value=68 Score=35.30 Aligned_cols=76 Identities=12% Similarity=0.152 Sum_probs=45.3
Q ss_pred CcEEEEEeeCce---eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeC
Q 006811 139 GLCLEKIGNGSY---LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFH 215 (630)
Q Consensus 139 G~~le~va~Gl~---~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfh 215 (630)
++.+.....|-. ..+++.|++.+.|+.+..+|.|+++++..... . + ........+-......++|+
T Consensus 371 ~l~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~--~--------~-~~~~~~~~~h~~~v~~v~~s 439 (694)
T 3dm0_A 371 GLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDK--A--------Y-GVAQRRLTGHSHFVEDVVLS 439 (694)
T ss_dssp SSEEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTT--C--------S-CEEEEEEECCSSCEEEEEEC
T ss_pred ccchhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCc--c--------c-ccccceecCCCCcEEEEEEC
Confidence 566665555543 77889998875566677899999997632111 0 0 00012223445667899999
Q ss_pred CCCCCCCEEEEEEe
Q 006811 216 PNFAKNGRFFASFN 229 (630)
Q Consensus 216 PdF~~Ng~~YvsYs 229 (630)
|+ +.+.++-+
T Consensus 440 ~~----g~~l~sgs 449 (694)
T 3dm0_A 440 SD----GQFALSGS 449 (694)
T ss_dssp TT----SSEEEEEE
T ss_pred CC----CCEEEEEe
Confidence 84 55544433
No 173
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=70.71 E-value=52 Score=31.72 Aligned_cols=60 Identities=12% Similarity=0.125 Sum_probs=37.2
Q ss_pred eeEEEcCCCC---ceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 006811 151 LNMVAHPDGS---NRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 227 (630)
Q Consensus 151 ~~ma~~pDGs---~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Yvs 227 (630)
..+++.||+. ..++++..+|.|+++++. .+ +.+ ............++|+|+ ++.+.++
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~-~~--~~~-------------~~~~~~~~~i~~~~~~~~---~~~~l~s 133 (366)
T 3k26_A 73 YTCAWTYDSNTSHPLLAVAGSRGIIRIINPI-TM--QCI-------------KHYVGHGNAINELKFHPR---DPNLLLS 133 (366)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCEEEEECTT-TC--CEE-------------EEEESCCSCEEEEEECSS---CTTEEEE
T ss_pred EEEEeccCCCCCCCEEEEecCCCEEEEEEch-hc--eEe-------------eeecCCCCcEEEEEECCC---CCCEEEE
Confidence 6788999843 256667789999998742 22 221 112234567899999982 4445444
Q ss_pred Ee
Q 006811 228 FN 229 (630)
Q Consensus 228 Ys 229 (630)
-+
T Consensus 134 ~~ 135 (366)
T 3k26_A 134 VS 135 (366)
T ss_dssp EE
T ss_pred Ee
Confidence 33
No 174
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=70.38 E-value=74 Score=32.17 Aligned_cols=50 Identities=14% Similarity=0.221 Sum_probs=34.2
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..++|.|||. +++.+..+|.|+++++. . ++.+ .+...-+.....++|+|+
T Consensus 127 ~~v~~s~dg~-~l~s~~~d~~i~iwd~~-~--~~~~-------------~~~~~h~~~v~~~~~~p~ 176 (393)
T 1erj_A 127 RSVCFSPDGK-FLATGAEDRLIRIWDIE-N--RKIV-------------MILQGHEQDIYSLDYFPS 176 (393)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETT-T--TEEE-------------EEECCCSSCEEEEEECTT
T ss_pred EEEEECCCCC-EEEEEcCCCeEEEEECC-C--CcEE-------------EEEccCCCCEEEEEEcCC
Confidence 5789999995 67777789999999752 2 2221 112233556789999985
No 175
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=70.24 E-value=84 Score=30.70 Aligned_cols=28 Identities=14% Similarity=0.173 Sum_probs=17.4
Q ss_pred eEEEeccc-cceeeeecCCCCCeeEEEeccC
Q 006811 387 EIWALGLR-NPWRCSFDSDRPSYFMCADVGQ 416 (630)
Q Consensus 387 EI~A~GlR-NP~r~afD~~~g~~l~~~DvG~ 416 (630)
++|.++.. .|+...+++.. .+++++.+.
T Consensus 157 ~~w~~~~~~~~~~~~~~~~g--~~~v~~~~~ 185 (276)
T 3no2_A 157 LLNSVKLSGTPFSSAFLDNG--DCLVACGDA 185 (276)
T ss_dssp EEEEEECSSCCCEEEECTTS--CEEEECBTT
T ss_pred EEEEEECCCCccceeEcCCC--CEEEEeCCC
Confidence 57777764 46777777653 366665543
No 176
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=69.94 E-value=89 Score=30.87 Aligned_cols=39 Identities=10% Similarity=0.142 Sum_probs=27.6
Q ss_pred CcEEEEEeeCce-eeEEEcC-CCCceEEEEecCceEEEEEcc
Q 006811 139 GLCLEKIGNGSY-LNMVAHP-DGSNRAFFSNQEGKIWLATIP 178 (630)
Q Consensus 139 G~~le~va~Gl~-~~ma~~p-DGs~RlfV~eq~G~V~~~~~p 178 (630)
+-++..+...-. ..+++.| ||. .++++..+|.|+++++.
T Consensus 241 ~~~~~~~~~~~~v~~~~~s~~~~~-~l~~~~~d~~i~iwd~~ 281 (383)
T 3ei3_B 241 NSYIAEMPHEKPVNAAYFNPTDST-KLLTTDQRNEIRVYSSY 281 (383)
T ss_dssp TCEEEEEECSSCEEEEEECTTTSC-EEEEEESSSEEEEEETT
T ss_pred cceEEEecCCCceEEEEEcCCCCC-EEEEEcCCCcEEEEECC
Confidence 445555542222 7899999 885 67777789999999863
No 177
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=69.59 E-value=19 Score=38.81 Aligned_cols=26 Identities=8% Similarity=0.011 Sum_probs=18.0
Q ss_pred eeEEEcCCCCceEEEEecC----ceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQE----GKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~----G~V~~~~~ 177 (630)
+..+++|||. +++.+..+ +.||++++
T Consensus 153 ~~~~~spDG~-~la~~~~~~~~~~~i~~~d~ 182 (582)
T 3o4h_A 153 FGFVSDIRGD-LIAGLGFFGGGRVSLFTSNL 182 (582)
T ss_dssp CEEEEEEETT-EEEEEEEEETTEEEEEEEET
T ss_pred ceEEECCCCC-EEEEEEEcCCCCeEEEEEcC
Confidence 7788999995 44434433 67888874
No 178
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=69.47 E-value=17 Score=36.94 Aligned_cols=61 Identities=16% Similarity=0.274 Sum_probs=39.6
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEee
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFNC 230 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs~ 230 (630)
..|+|.|||. .|.++..+|.|+++++. +++.+. .++. .-.....++||+| +|++.++-+.
T Consensus 273 ~~~~~Spdg~-~lasgs~D~~V~iwd~~---~~~~~~-----~~~~-------gH~~~V~~v~fSp----dg~~laS~S~ 332 (365)
T 4h5i_A 273 TSMDVDMKGE-LAVLASNDNSIALVKLK---DLSMSK-----IFKQ-------AHSFAITEVTISP----DSTYVASVSA 332 (365)
T ss_dssp EEEEECTTSC-EEEEEETTSCEEEEETT---TTEEEE-----EETT-------SSSSCEEEEEECT----TSCEEEEEET
T ss_pred EeEEECCCCC-ceEEEcCCCEEEEEECC---CCcEEE-----EecC-------cccCCEEEEEECC----CCCEEEEEeC
Confidence 5789999994 45566789999999752 233321 1111 1245578999999 5777676554
Q ss_pred c
Q 006811 231 D 231 (630)
Q Consensus 231 ~ 231 (630)
|
T Consensus 333 D 333 (365)
T 4h5i_A 333 A 333 (365)
T ss_dssp T
T ss_pred C
Confidence 3
No 179
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=69.02 E-value=79 Score=31.58 Aligned_cols=60 Identities=12% Similarity=0.160 Sum_probs=37.8
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..++|.||+. +++.+..+|.|+++++. .+ +.+ ............++|+|+- +|.++++-+
T Consensus 158 ~~~~~~~~~~-~l~t~s~D~~v~lwd~~-~~--~~~-------------~~~~~h~~~v~~~~~~~~~--~g~~l~sgs 217 (354)
T 2pbi_B 158 SACSFTNSDM-QILTASGDGTCALWDVE-SG--QLL-------------QSFHGHGADVLCLDLAPSE--TGNTFVSGG 217 (354)
T ss_dssp EEEEECSSSS-EEEEEETTSEEEEEETT-TC--CEE-------------EEEECCSSCEEEEEECCCS--SCCEEEEEE
T ss_pred EEEEEeCCCC-EEEEEeCCCcEEEEeCC-CC--eEE-------------EEEcCCCCCeEEEEEEeCC--CCCEEEEEe
Confidence 6789999985 68888889999999852 22 222 1122334557788888742 344444433
No 180
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=68.39 E-value=52 Score=32.49 Aligned_cols=26 Identities=15% Similarity=0.268 Sum_probs=21.3
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
..++++|||. .|..+..+|.|+++++
T Consensus 217 ~~~~~s~~g~-~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 217 NHLSISPNGK-YIATGGKDKKLLIWDI 242 (343)
T ss_dssp EEEEECTTSS-EEEEEETTCEEEEEES
T ss_pred eEEEECCCCC-EEEEEcCCCeEEEEEC
Confidence 6789999995 5666678999999975
No 181
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=68.04 E-value=59 Score=32.03 Aligned_cols=49 Identities=8% Similarity=0.139 Sum_probs=34.5
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..+++.||| ++++...+|.|+++++. . ++.+ ......+.....++|+|+
T Consensus 293 ~~~~~~~~~--~l~~~~~d~~i~i~d~~-~--~~~~-------------~~~~~~~~~i~~~~~s~~ 341 (425)
T 1r5m_A 293 VSASWVGDD--KVISCSMDGSVRLWSLK-Q--NTLL-------------ALSIVDGVPIFAGRISQD 341 (425)
T ss_dssp EEEEEETTT--EEEEEETTSEEEEEETT-T--TEEE-------------EEEECTTCCEEEEEECTT
T ss_pred EEEEECCCC--EEEEEeCCCcEEEEECC-C--CcEe-------------EecccCCccEEEEEEcCC
Confidence 778999999 78888899999999752 2 2221 112233556789999984
No 182
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=67.48 E-value=53 Score=33.78 Aligned_cols=66 Identities=14% Similarity=0.142 Sum_probs=40.8
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 228 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsY 228 (630)
..|++.|++.+.|+.+..+|.|+++++....... ..+.. ............+++|+|+ ++.++++-
T Consensus 185 ~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~--------~~~~~-~~~~~~h~~~v~~v~~~p~---~~~~l~s~ 250 (430)
T 2xyi_A 185 YGLSWNPNLNGYLLSASDDHTICLWDINATPKEH--------RVIDA-KNIFTGHTAVVEDVAWHLL---HESLFGSV 250 (430)
T ss_dssp CCEEECTTSTTEEEEECTTSCEEEEETTSCCBGG--------GEEEC-SEEECCCSSCEEEEEECSS---CTTEEEEE
T ss_pred EEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCC--------ceecc-ceeecCCCCCEeeeEEeCC---CCCEEEEE
Confidence 7899999997677778889999999863311110 01111 1122234566899999984 44555543
No 183
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=67.27 E-value=89 Score=29.82 Aligned_cols=26 Identities=23% Similarity=0.358 Sum_probs=21.2
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
..++++|||. .++.+..+|.|+++++
T Consensus 219 ~~~~~s~~~~-~l~s~s~Dg~i~iwd~ 244 (340)
T 4aow_A 219 NTVTVSPDGS-LCASGGKDGQAMLWDL 244 (340)
T ss_dssp EEEEECTTSS-EEEEEETTCEEEEEET
T ss_pred EEEEECCCCC-EEEEEeCCCeEEEEEe
Confidence 6789999995 5666678999999975
No 184
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=66.86 E-value=63 Score=31.21 Aligned_cols=62 Identities=15% Similarity=0.103 Sum_probs=37.1
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..++|.|||. +|+.+..+|.|+++++.. +..+.+ .+..+-+.....++|.|+ .++.+.++-+
T Consensus 13 ~~~~~s~~g~-~las~s~D~~v~iw~~~~-~~~~~~-------------~~l~gH~~~V~~v~~s~~--~~g~~l~s~s 74 (297)
T 2pm7_B 13 HDAVMDYYGK-RMATCSSDKTIKIFEVEG-ETHKLI-------------DTLTGHEGPVWRVDWAHP--KFGTILASCS 74 (297)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEEBCS-SCBCCC-------------EEECCCSSCEEEEEECCG--GGCSEEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEecCC-CCcEEE-------------EEEccccCCeEEEEecCC--CcCCEEEEEc
Confidence 6789999995 677777899999997532 211111 122233456788999653 2244444433
No 185
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=66.75 E-value=36 Score=35.94 Aligned_cols=50 Identities=14% Similarity=0.133 Sum_probs=33.5
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHP 216 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhP 216 (630)
..|++.|||. .|+++..+|.|+++++. . ++.+. . ...........++|+|
T Consensus 492 ~~~~~s~~g~-~l~~~~~dg~i~iw~~~-~--~~~~~-----~-------~~~~h~~~v~~~~~sp 541 (615)
T 1pgu_A 492 SYISISPSET-YIAAGDVMGKILLYDLQ-S--REVKT-----S-------RWAFRTSKINAISWKP 541 (615)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETT-T--TEEEE-----C-------CSCCCSSCEEEEEECC
T ss_pred EEEEECCCCC-EEEEcCCCCeEEEeeCC-C--Cccee-----E-------eecCCCCceeEEEEcC
Confidence 7899999995 56667789999999853 2 22221 0 0011345688999998
No 186
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=66.58 E-value=83 Score=30.51 Aligned_cols=52 Identities=13% Similarity=0.121 Sum_probs=33.7
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..|++.|||. .++.+..+|.|+++++. .+ +... .............++|+|+
T Consensus 56 ~~~~~~~~~~-~l~~~~~dg~i~vwd~~-~~--~~~~-----------~~~~~~~~~~v~~~~~~~~ 107 (372)
T 1k8k_C 56 TGVDWAPDSN-RIVTCGTDRNAYVWTLK-GR--TWKP-----------TLVILRINRAARCVRWAPN 107 (372)
T ss_dssp EEEEEETTTT-EEEEEETTSCEEEEEEE-TT--EEEE-----------EEECCCCSSCEEEEEECTT
T ss_pred cEEEEeCCCC-EEEEEcCCCeEEEEECC-CC--eeee-----------eEEeecCCCceeEEEECCC
Confidence 7899999985 67777789999998753 22 1110 0011223456889999985
No 187
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=65.76 E-value=1.1e+02 Score=30.54 Aligned_cols=27 Identities=26% Similarity=0.457 Sum_probs=23.2
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
..++++|||.+.++.+..+|.|+++++
T Consensus 230 ~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 230 TAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred EEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 689999998557888889999999985
No 188
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=65.15 E-value=80 Score=31.05 Aligned_cols=50 Identities=4% Similarity=0.118 Sum_probs=33.4
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..|++.|||. .++++..+|.|+++++.. ++.+ ............++|+|+
T Consensus 251 ~~~~~~~~~~-~l~~~~~d~~i~i~d~~~---~~~~-------------~~~~~~~~~i~~~~~~~~ 300 (425)
T 1r5m_A 251 SVLEFNDTNK-LLLSASDDGTLRIWHGGN---GNSQ-------------NCFYGHSQSIVSASWVGD 300 (425)
T ss_dssp EEEEEETTTT-EEEEEETTSCEEEECSSS---BSCS-------------EEECCCSSCEEEEEEETT
T ss_pred EEEEECCCCC-EEEEEcCCCEEEEEECCC---Cccc-------------eEecCCCccEEEEEECCC
Confidence 6789999985 677777899999987421 1111 111223456789999983
No 189
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=65.09 E-value=1.4e+02 Score=31.36 Aligned_cols=25 Identities=16% Similarity=0.235 Sum_probs=18.4
Q ss_pred cceeeeecCCC-CC-eeEEEeccCCCc
Q 006811 395 NPWRCSFDSDR-PS-YFMCADVGQDVY 419 (630)
Q Consensus 395 NP~r~afD~~~-g~-~l~~~DvG~d~~ 419 (630)
.+-+|++.+.. +. +|++++.|.+.+
T Consensus 230 DvEGLai~~~~~g~gyLivSsQG~~s~ 256 (355)
T 3amr_A 230 DIEGLTIYYAADGKGYLMASSQGNSSY 256 (355)
T ss_dssp CEEEEEEEECGGGCEEEEEEEGGGTEE
T ss_pred CcceEEEEecCCCCEEEEEEcCCCCEE
Confidence 78899996432 22 799999998764
No 190
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=65.08 E-value=1e+02 Score=32.62 Aligned_cols=136 Identities=14% Similarity=0.212 Sum_probs=81.0
Q ss_pred eeEEEcCC---CCceEEEEecCc-eEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCc----eeeeeeCCCCCCCC
Q 006811 151 LNMVAHPD---GSNRAFFSNQEG-KIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFG----LMGMAFHPNFAKNG 222 (630)
Q Consensus 151 ~~ma~~pD---Gs~RlfV~eq~G-~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~G----LLGiAfhPdF~~Ng 222 (630)
-+|+.+|| |...||..-..| +++.+.. +.|+ ... +...|..-+++| -+++|.|+ ++|
T Consensus 223 ~gIaLsp~~~~~~~~LYf~plss~~ly~V~T------~~L~--~~~----~~~~v~~~G~kg~~s~~~~~~~D~---~~G 287 (381)
T 3q6k_A 223 FGITLGDRDSEGNRPAYYLAGSAIKVYSVNT------KELK--QKG----GKLNPELLGNRGKYNDAIALAYDP---KTK 287 (381)
T ss_dssp EEEEECCCCTTSCCEEEEEESSCSEEEEEEH------HHHS--STT----CCCCCEEEEECCTTCCEEEEEECT---TTC
T ss_pred eEEEecCCcCCCCeEEEEEECCCCcEEEEEH------HHhh--Ccc----hhhceEEeeecCCCCCcceEEEeC---CCC
Confidence 46777877 233688877777 5776531 1221 111 123444445555 35678875 489
Q ss_pred EEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccC
Q 006811 223 RFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLS 302 (630)
Q Consensus 223 ~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P 302 (630)
.+|+..... ..|.+|..+.. .-.+...++|... |
T Consensus 288 ~ly~~~~~~------------------------------------~aI~~w~~~~~--------~~~~~n~~~l~~d--~ 321 (381)
T 3q6k_A 288 VIFFAEANT------------------------------------KQVSCWNTQKM--------PLRMKNTDVVYTS--S 321 (381)
T ss_dssp EEEEEESSS------------------------------------SEEEEEETTSC--------SBCGGGEEEEEEC--T
T ss_pred eEEEEeccC------------------------------------CeEEEEeCCCC--------ccccCceEEEEEC--C
Confidence 988866431 36788864320 0112344555542 3
Q ss_pred CCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccc--cCCCCCeeEEEE-ecC
Q 006811 303 FNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQ--NKKSLLGKITRL-DVD 353 (630)
Q Consensus 303 ~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQ--n~~sl~GKILRI-dvD 353 (630)
.-.+.-.|.++. ||+|||.+---- .|...+ +.....=.|+|+ +++
T Consensus 322 -~l~~pd~~~i~~-~g~Lwv~sn~l~----~~~~g~l~d~~~~nfrI~r~~~~~ 369 (381)
T 3q6k_A 322 -RFVFGTDISVDS-KGGLWFMSNGFP----PIRKSEKFKYDFPRYRLMRIMDTQ 369 (381)
T ss_dssp -TCCSEEEEEECT-TSCEEEEECSCC----SSTTGGGCCCSSCSEEEEEESCHH
T ss_pred -CccccCeEEECC-CCeEEEEECcch----HhhcCCcCCCCcCCEEEEEecCHH
Confidence 456777899998 999999996532 234444 677778889999 664
No 191
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=64.97 E-value=1.1e+02 Score=29.93 Aligned_cols=74 Identities=9% Similarity=0.096 Sum_probs=42.3
Q ss_pred cEEEEEeeCce---eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCC
Q 006811 140 LCLEKIGNGSY---LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHP 216 (630)
Q Consensus 140 ~~le~va~Gl~---~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhP 216 (630)
+.++....|-. ..+++.|++.+.|+.+..+|.|+++++..... ... .+ -....+-......++|+|
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~--~~~----~~-----~~~~~~h~~~v~~~~~s~ 75 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ--KFG----VP-----VRSFKGHSHIVQDCTLTA 75 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT--EEE----EE-----EEEEECCSSCEEEEEECT
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc--ccc----cc-----ceEEeCCcccEEEEEECC
Confidence 34444444433 67899998765677777899999887532110 000 00 012234456678899997
Q ss_pred CCCCCCEEEEEE
Q 006811 217 NFAKNGRFFASF 228 (630)
Q Consensus 217 dF~~Ng~~YvsY 228 (630)
+ +.+.++-
T Consensus 76 d----g~~l~s~ 83 (319)
T 3frx_A 76 D----GAYALSA 83 (319)
T ss_dssp T----SSEEEEE
T ss_pred C----CCEEEEE
Confidence 3 5444433
No 192
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=64.09 E-value=46 Score=32.83 Aligned_cols=26 Identities=15% Similarity=0.211 Sum_probs=21.8
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
..++++|||. .++.+..+|.|+++++
T Consensus 150 ~~~~~~~~~~-~l~~~~~d~~i~iwd~ 175 (377)
T 3dwl_C 150 LSLDWHPNNV-LLAAGCADRKAYVLSA 175 (377)
T ss_dssp EEEEECTTSS-EEEEEESSSCEEEEEE
T ss_pred EEEEEcCCCC-EEEEEeCCCEEEEEEE
Confidence 7899999985 6777778999999875
No 193
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=63.48 E-value=1.2e+02 Score=30.38 Aligned_cols=49 Identities=14% Similarity=0.213 Sum_probs=32.0
Q ss_pred eeEEEcCCCCceEEEEe---cCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSN---QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~e---q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..++++|+|. .++++- .+|.|+++++. . ++.+. .+ ........++|+|+
T Consensus 263 ~~~~~~p~~~-~ll~~~~gs~d~~i~i~d~~-~--~~~~~------------~~--~~~~~v~~~~~s~~ 314 (401)
T 4aez_A 263 KAVAWCPWQS-NLLATGGGTMDKQIHFWNAA-T--GARVN------------TV--DAGSQVTSLIWSPH 314 (401)
T ss_dssp CEEEECTTST-TEEEEECCTTTCEEEEEETT-T--CCEEE------------EE--ECSSCEEEEEECSS
T ss_pred EEEEECCCCC-CEEEEecCCCCCEEEEEECC-C--CCEEE------------EE--eCCCcEEEEEECCC
Confidence 6799999986 466653 58999999753 2 22221 11 23456889999984
No 194
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=63.31 E-value=16 Score=37.15 Aligned_cols=63 Identities=10% Similarity=0.062 Sum_probs=44.0
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..|++.|||. .++++..+|.|+++++.. ++.+. ............++++|.|..++.+.++-+
T Consensus 218 ~~~~~s~~~~-~l~s~~~dg~i~iwd~~~---~~~~~------------~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~ 280 (437)
T 3gre_A 218 SSICIDEECC-VLILGTTRGIIDIWDIRF---NVLIR------------SWSFGDHAPITHVEVCQFYGKNSVIVVGGS 280 (437)
T ss_dssp EEEEECTTSC-EEEEEETTSCEEEEETTT---TEEEE------------EEBCTTCEEEEEEEECTTTCTTEEEEEEES
T ss_pred EEEEECCCCC-EEEEEcCCCeEEEEEcCC---ccEEE------------EEecCCCCceEEEEeccccCCCccEEEEEc
Confidence 7899999984 677788899999998532 22221 111134456889999999998887666543
No 195
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=63.15 E-value=14 Score=41.54 Aligned_cols=96 Identities=20% Similarity=0.284 Sum_probs=54.1
Q ss_pred eeEEcCCCCeEEEEeCCCCCCC---CcccccccC--CCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCCC
Q 006811 310 QLLFGPTDGYMYFMMGDGGGTA---DPYNFSQNK--KSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSGL 384 (630)
Q Consensus 310 ~L~FGp~DG~LYv~~GDgg~~~---DP~~~aQn~--~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~~ 384 (630)
.|.+.|.+|.+|+++=.....+ .| ..+.|+ ....|.|+|+..++.. ..++...|..|-+ ..+|-..+.
T Consensus 388 di~v~p~~g~vY~alTnn~~rg~~~~~-~~~~Npr~~n~~G~I~r~~e~~~d---~~a~~f~W~i~l~-~G~p~~~~~-- 460 (592)
T 4a9v_A 388 WIVVSPKDGQVYCTLTNNAKRGEDGQP-VGGPNPREKNVYGQILRWRTDRDD---HASKTFAWDLFVV-AGNPSVHAG-- 460 (592)
T ss_dssp EEEECTTTCCEEEEECCBTTTTSTTSC-CBTTBCCSSBSSCEEEEEEEGGGC---TTCSEEEEEEEEE-CCCTTTSTT--
T ss_pred ceeEcCCCCEEEEEEeCCCCCCCcCcc-ccCCCCccCCCCCeEEEEeeCCCC---cccceeeEEEEEE-ccCCccccc--
Confidence 4778887899999974433221 12 123333 3578999999886521 1122334555533 222311110
Q ss_pred CCeEEE--------eccccceeeeecCCCCCeeEE-EeccC
Q 006811 385 QPEIWA--------LGLRNPWRCSFDSDRPSYFMC-ADVGQ 416 (630)
Q Consensus 385 ~pEI~A--------~GlRNP~r~afD~~~g~~l~~-~DvG~ 416 (630)
..|+ -.|.+|=.++||+. | .||+ +|-+.
T Consensus 461 --~~~~g~~~~~~~~~fnsPDnL~fd~~-G-~LWf~TD~~~ 497 (592)
T 4a9v_A 461 --TPKGGSSNITPQNMFNSPDGLGFDKA-G-RLWILTDGDS 497 (592)
T ss_dssp --SGGGCCTTCCTTTCCCCEEEEEECTT-C-CEEEEECCCC
T ss_pred --ccccCccCccccCccCCCCceEECCC-C-CEEEEeCCCc
Confidence 0011 14789999999997 5 4888 88543
No 196
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=63.13 E-value=58 Score=33.32 Aligned_cols=58 Identities=16% Similarity=0.158 Sum_probs=37.2
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..|+|+||+. .++.+..+|.|+++++. .+. .+ ....+-......++|+| ++.+.++-+
T Consensus 112 ~~~~~~p~~~-~l~s~s~Dg~i~vwd~~-~~~--~~-------------~~l~~h~~~V~~v~~~~----~~~~l~sgs 169 (410)
T 1vyh_C 112 TRVIFHPVFS-VMVSASEDATIKVWDYE-TGD--FE-------------RTLKGHTDSVQDISFDH----SGKLLASCS 169 (410)
T ss_dssp EEEEECSSSS-EEEEEESSSCEEEEETT-TCC--CC-------------EEECCCSSCEEEEEECT----TSSEEEEEE
T ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEECC-CCc--EE-------------EEEeccCCcEEEEEEcC----CCCEEEEEe
Confidence 7899999995 56666689999999753 221 11 12223345678999998 355555443
No 197
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=62.97 E-value=52 Score=33.33 Aligned_cols=26 Identities=15% Similarity=0.263 Sum_probs=22.2
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
..|+++||+. .++++..+|.|+++++
T Consensus 115 ~~~~~~~~~~-~l~s~s~dg~i~vwd~ 140 (437)
T 3gre_A 115 TQITMIPNFD-AFAVSSKDGQIIVLKV 140 (437)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEEE
T ss_pred EEEEEeCCCC-EEEEEeCCCEEEEEEe
Confidence 7899999985 6788888999999875
No 198
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=62.18 E-value=79 Score=32.30 Aligned_cols=50 Identities=12% Similarity=0.105 Sum_probs=33.5
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..++|+|||. .++.+..+|.|+++++. . ++.+. ....-+.....++|+|+
T Consensus 154 ~~v~~~~~~~-~l~sgs~D~~i~iwd~~-~--~~~~~-------------~~~~h~~~V~~v~~~p~ 203 (410)
T 1vyh_C 154 QDISFDHSGK-LLASCSADMTIKLWDFQ-G--FECIR-------------TMHGHDHNVSSVSIMPN 203 (410)
T ss_dssp EEEEECTTSS-EEEEEETTSCCCEEETT-S--SCEEE-------------CCCCCSSCEEEEEECSS
T ss_pred EEEEEcCCCC-EEEEEeCCCeEEEEeCC-C--CceeE-------------EEcCCCCCEEEEEEeCC
Confidence 6789999985 56677789999998752 1 22211 11223456889999984
No 199
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=62.06 E-value=41 Score=36.64 Aligned_cols=60 Identities=13% Similarity=0.156 Sum_probs=35.7
Q ss_pred CceeeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 006811 148 GSYLNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 227 (630)
Q Consensus 148 Gl~~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Yvs 227 (630)
|-.+.++|.|||. .+++-..+.|+++++. ++. .+ .+..+-......++|+| +|.+-++
T Consensus 19 g~~~~~~~spdg~--~l~~~~~~~v~l~~~~-~~~--~~-------------~~~~~h~~~v~~~~~sp----dg~~las 76 (611)
T 1nr0_A 19 GTAVVLGNTPAGD--KIQYCNGTSVYTVPVG-SLT--DT-------------EIYTEHSHQTTVAKTSP----SGYYCAS 76 (611)
T ss_dssp TCCCCCEECTTSS--EEEEEETTEEEEEETT-CSS--CC-------------EEECCCSSCEEEEEECT----TSSEEEE
T ss_pred CceeEEeeCCCCC--EEEeCCCCEEEEecCC-Ccc--cC-------------eEecCCCCceEEEEECC----CCcEEEE
Confidence 3336789999994 5554446788887642 221 11 22233345678899998 4665554
Q ss_pred Ee
Q 006811 228 FN 229 (630)
Q Consensus 228 Ys 229 (630)
-+
T Consensus 77 g~ 78 (611)
T 1nr0_A 77 GD 78 (611)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 200
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=61.84 E-value=1.1e+02 Score=34.30 Aligned_cols=25 Identities=8% Similarity=0.005 Sum_probs=22.6
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLAT 176 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~ 176 (630)
+.++|.|||. ++-++..+|.|++++
T Consensus 89 ~~vawSPdG~-~LAs~s~dg~V~iwd 113 (588)
T 2j04_A 89 RVCKPSPIDD-WMAVLSNNGNVSVFK 113 (588)
T ss_dssp EEEEECSSSS-CEEEEETTSCEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCcEEEEe
Confidence 7899999996 788899999999986
No 201
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=61.66 E-value=76 Score=31.63 Aligned_cols=49 Identities=16% Similarity=0.129 Sum_probs=31.8
Q ss_pred eEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 152 NMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 152 ~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..++.|||. +++++..+|.|+++++. . ++.+ .+...-......++|+|+
T Consensus 102 ~~~~~~~~~-~l~~~~~dg~i~iwd~~-~--~~~~-------------~~~~~h~~~v~~~~~~~~ 150 (420)
T 3vl1_A 102 VDTAKLQMR-RFILGTTEGDIKVLDSN-F--NLQR-------------EIDQAHVSEITKLKFFPS 150 (420)
T ss_dssp EEEECSSSC-EEEEEETTSCEEEECTT-S--CEEE-------------EETTSSSSCEEEEEECTT
T ss_pred EEEEecCCC-EEEEEECCCCEEEEeCC-C--ccee-------------eecccccCccEEEEECCC
Confidence 346788985 67777789999998742 1 2221 111233566899999984
No 202
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=61.48 E-value=1.1e+02 Score=29.10 Aligned_cols=50 Identities=8% Similarity=0.141 Sum_probs=33.3
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..+++.|||. .++.+..+|.|+++++.. + +.+ ............++|+|+
T Consensus 69 ~~~~~~~~~~-~l~s~~~d~~i~vwd~~~-~--~~~-------------~~~~~~~~~v~~~~~~~~ 118 (312)
T 4ery_A 69 SDVAWSSDSN-LLVSASDDKTLKIWDVSS-G--KCL-------------KTLKGHSNYVFCCNFNPQ 118 (312)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETTT-C--CEE-------------EEEECCSSCEEEEEECSS
T ss_pred EEEEEcCCCC-EEEEECCCCEEEEEECCC-C--cEE-------------EEEcCCCCCEEEEEEcCC
Confidence 6789999994 677777899999997532 2 221 111223445788999984
No 203
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=61.29 E-value=1.2e+02 Score=29.12 Aligned_cols=51 Identities=18% Similarity=0.146 Sum_probs=34.7
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..+++.|||. .++++..+|.|+++++... .+.+ ...........+++|+|+
T Consensus 179 ~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~--~~~~-------------~~~~~~~~~v~~~~~~~~ 229 (369)
T 3zwl_B 179 TVAGWSTKGK-YIIAGHKDGKISKYDVSNN--YEYV-------------DSIDLHEKSISDMQFSPD 229 (369)
T ss_dssp EEEEECGGGC-EEEEEETTSEEEEEETTTT--TEEE-------------EEEECCSSCEEEEEECTT
T ss_pred eEEEEcCCCC-EEEEEcCCCEEEEEECCCC--cEeE-------------EEEecCCCceeEEEECCC
Confidence 7789999985 6777888999999975321 1111 112234567889999984
No 204
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=60.89 E-value=58 Score=36.68 Aligned_cols=62 Identities=15% Similarity=0.097 Sum_probs=39.0
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..|+++|||. .++.+..+|.|+++++. .++++.+ ...........+++|+|+ .++.+.++-+
T Consensus 13 ~~l~~s~dg~-~latg~~dg~I~vwd~~-~~~~~~~-------------~~l~~h~~~V~~l~~s~~--~~~~~l~s~s 74 (753)
T 3jro_A 13 HDAVLDYYGK-RLATCSSDKTIKIFEVE-GETHKLI-------------DTLTGHEGPVWRVDWAHP--KFGTILASCS 74 (753)
T ss_dssp EEECCCSSSC-CEEEEETTTEEEEEEEE-TTEEEEE-------------EEECCCSSCEEEEEECCT--TSCSEEEEEE
T ss_pred EEEEECCCCC-eEEEEECCCcEEEEecC-CCCCccc-------------eeccCCcCceEEEEecCC--CCCCEEEEEe
Confidence 6789999995 68888889999998753 2222211 112233566889999875 2344444443
No 205
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=60.75 E-value=39 Score=33.32 Aligned_cols=58 Identities=17% Similarity=0.162 Sum_probs=35.4
Q ss_pred eeEEEcCCCCceEEEE-ecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 006811 151 LNMVAHPDGSNRAFFS-NQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 228 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~-eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsY 228 (630)
..++++||| +++++ ..+|.|+++++. .+. .+. . .....-+.....++|+| +|.+.++-
T Consensus 174 ~~~~~~pdg--~~lasg~~dg~i~iwd~~-~~~--~~~----~-------~~~~~h~~~v~~l~fs~----~g~~l~s~ 232 (343)
T 3lrv_A 174 SSGVLHKDS--LLLALYSPDGILDVYNLS-SPD--QAS----S-------RFPVDEEAKIKEVKFAD----NGYWMVVE 232 (343)
T ss_dssp CEEEECTTS--CEEEEECTTSCEEEEESS-CTT--SCC----E-------ECCCCTTSCEEEEEECT----TSSEEEEE
T ss_pred EEEEECCCC--CEEEEEcCCCEEEEEECC-CCC--CCc----c-------EEeccCCCCEEEEEEeC----CCCEEEEE
Confidence 688999999 45554 789999999853 221 110 0 01111245788999998 45544433
No 206
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=59.84 E-value=34 Score=34.79 Aligned_cols=72 Identities=4% Similarity=-0.120 Sum_probs=41.4
Q ss_pred EEEeeCceeeEEEcCCCCceEEEEe----------cCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeee
Q 006811 143 EKIGNGSYLNMVAHPDGSNRAFFSN----------QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGM 212 (630)
Q Consensus 143 e~va~Gl~~~ma~~pDGs~RlfV~e----------q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGi 212 (630)
.++..|..-.|+++|||. ++||+. +.+.|.+++. + +.+.++ . +.+... .........+|
T Consensus 45 ~~i~~g~~p~i~~spdg~-~lyv~~~~~~~~~~g~~~~~v~v~d~-~--t~~~~~---~---i~~~~~-~~~~g~~p~~i 113 (361)
T 2oiz_A 45 GMVPTAFNGHVQVSNDGK-KIYTMTTYHERITRGKRSDVVEVWDA-D--KLTFEK---E---ISLPPK-RVQGLNYDGLF 113 (361)
T ss_dssp EEEECCEEEEEEECTTSS-EEEEEEEEETTSSSSCEEEEEEEEET-T--TCCEEE---E---EEECTT-BCCBCCCGGGE
T ss_pred EEecCCCCCceEECCCCC-EEEEEEecccccccCCCCCEEEEEEC-c--CCcEEE---E---EEcCcc-ccccCCCcceE
Confidence 444445445899999996 899997 3567888863 2 222221 0 000000 00112356789
Q ss_pred eeCCCCCCCCEEEEEE
Q 006811 213 AFHPNFAKNGRFFASF 228 (630)
Q Consensus 213 AfhPdF~~Ng~~YvsY 228 (630)
+|+|+ ..++|++-
T Consensus 114 ~~spd---g~~l~v~n 126 (361)
T 2oiz_A 114 RQTTD---GKFIVLQN 126 (361)
T ss_dssp EECTT---SSEEEEEE
T ss_pred EECCC---CCEEEEEC
Confidence 99986 45788863
No 207
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=59.81 E-value=15 Score=37.22 Aligned_cols=63 Identities=24% Similarity=0.273 Sum_probs=38.3
Q ss_pred EEEcCCCCceEEEEe-cCceEEEEEccCCCCCceeeecCCCCCcCCccce--eeCCCCceeeeeeCCCCCCCCEEEEE
Q 006811 153 MVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTDEV--HFDTEFGLMGMAFHPNFAKNGRFFAS 227 (630)
Q Consensus 153 ma~~pDGs~RlfV~e-q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V--~~~~e~GLLGiAfhPdF~~Ng~~Yvs 227 (630)
|.+. || ++|+.. +...|.+++ |+. ++.+. ...+-.+.+.. ....+..|-|||++|+ ..+|||.
T Consensus 177 Le~~-~G--~lyan~w~~~~I~vID-p~t--G~V~~---~Id~~~L~~~~~~~~~~~~vlNGIA~dp~---~~~lfVT 242 (262)
T 3nol_A 177 LEWV-DG--EIFANVWQTNKIVRID-PET--GKVTG---IIDLNGILAEAGPLPSPIDVLNGIAWDKE---HHRLFVT 242 (262)
T ss_dssp EEEE-TT--EEEEEETTSSEEEEEC-TTT--CBEEE---EEECTTGGGGSCSCCSSCCCEEEEEEETT---TTEEEEE
T ss_pred eEEE-CC--EEEEEEccCCeEEEEE-CCC--CcEEE---EEECCcCccccccccCcCCceEEEEEcCC---CCEEEEE
Confidence 5555 77 899988 578898886 544 34332 11111222222 1233567899999984 6789985
No 208
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=59.47 E-value=2.1e+02 Score=31.47 Aligned_cols=35 Identities=11% Similarity=0.023 Sum_probs=26.7
Q ss_pred EEEEEeeCce-eeEEEc----CCCCceEEEEec-CceEEEEE
Q 006811 141 CLEKIGNGSY-LNMVAH----PDGSNRAFFSNQ-EGKIWLAT 176 (630)
Q Consensus 141 ~le~va~Gl~-~~ma~~----pDGs~RlfV~eq-~G~V~~~~ 176 (630)
.+.+|..|.. ..|+++ |||. ++||+.. .+.|.+++
T Consensus 232 ~v~~i~~G~~P~~ia~s~~~~pDGk-~l~v~n~~~~~v~ViD 272 (567)
T 1qks_A 232 TVAEIKIGSEARSIETSKMEGWEDK-YAIAGAYWPPQYVIMD 272 (567)
T ss_dssp EEEEEECCSEEEEEEECCSTTCTTT-EEEEEEEETTEEEEEE
T ss_pred EeEEEecCCCCceeEEccccCCCCC-EEEEEEccCCeEEEEE
Confidence 4456666766 889999 6996 7888876 58888876
No 209
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=58.98 E-value=1.4e+02 Score=29.99 Aligned_cols=57 Identities=9% Similarity=0.102 Sum_probs=37.1
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 227 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Yvs 227 (630)
..|+++|||. .++++..+|.|+++++.. ++.+ ............++|+|+ +..++++
T Consensus 221 ~~~~~~~~~~-~l~s~~~d~~v~iwd~~~---~~~~-------------~~~~~~~~~v~~~~~~p~---~~~ll~~ 277 (401)
T 4aez_A 221 CGLAWRSDGL-QLASGGNDNVVQIWDARS---SIPK-------------FTKTNHNAAVKAVAWCPW---QSNLLAT 277 (401)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETTC---SSEE-------------EEECCCSSCCCEEEECTT---STTEEEE
T ss_pred eEEEEcCCCC-EEEEEeCCCeEEEccCCC---CCcc-------------EEecCCcceEEEEEECCC---CCCEEEE
Confidence 7799999985 677778899999997532 1111 111233556789999984 3345543
No 210
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=58.50 E-value=1.4e+02 Score=29.19 Aligned_cols=28 Identities=11% Similarity=0.057 Sum_probs=22.4
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEcc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIP 178 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p 178 (630)
..++++|+|...++++..+|.|+++++.
T Consensus 190 ~~~~~~~~~~~ll~~~~~dg~i~i~d~~ 217 (408)
T 4a11_B 190 LAVSWSPRYDYILATASADSRVKLWDVR 217 (408)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred EEEEECCCCCcEEEEEcCCCcEEEEECC
Confidence 7899999996336677789999999863
No 211
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=58.41 E-value=1.1e+02 Score=31.38 Aligned_cols=63 Identities=10% Similarity=0.064 Sum_probs=39.0
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFAS 227 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Yvs 227 (630)
..+++.|||. .|+++.++|.|+++++.+ +. .. ..+. .....-......++|+|+. ..+.+.++
T Consensus 153 ~~~~~sp~~~-~l~~~~~~g~v~~~~~~~-~~--~~----~~~~-----~~~~~h~~~v~~~~~sp~~-~~~~~l~s 215 (450)
T 2vdu_B 153 NAISIAEDDT-TVIIADKFGDVYSIDINS-IP--EE----KFTQ-----EPILGHVSMLTDVHLIKDS-DGHQFIIT 215 (450)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETTS-CC--CS----SCCC-----CCSEECSSCEEEEEEEECT-TSCEEEEE
T ss_pred eEEEEcCCCC-EEEEEeCCCcEEEEecCC-cc--cc----cccc-----eeeecccCceEEEEEcCCC-CCCcEEEE
Confidence 7899999995 788888999999987532 21 10 0000 1122334678899999853 12544443
No 212
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=57.26 E-value=1.4e+02 Score=28.69 Aligned_cols=53 Identities=17% Similarity=0.278 Sum_probs=34.6
Q ss_pred eeEEEcCC--CCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCC
Q 006811 151 LNMVAHPD--GSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNF 218 (630)
Q Consensus 151 ~~ma~~pD--Gs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF 218 (630)
..++++|+ |. .++++..+|.|+++++..... . . ..+......+...++|+|+-
T Consensus 103 ~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~---~-----~------~~~~~~h~~~v~~~~~~p~~ 157 (297)
T 2pm7_B 103 NSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGT---T-----S------PIIIDAHAIGVNSASWAPAT 157 (297)
T ss_dssp EEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSC---B-----C------CEEEECCSSCEEEEEECCCC
T ss_pred eEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCc---e-----e------eeeeecccCccceEeecCCc
Confidence 67899998 53 677778899999987532111 0 0 11223345678899999974
No 213
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=56.31 E-value=11 Score=37.74 Aligned_cols=30 Identities=10% Similarity=0.174 Sum_probs=26.5
Q ss_pred CCccceEEEcCCCcEEEEeCCeEEEEecCC
Q 006811 549 LGYIYSFGEDNRKDIFILTSDGVYRVVRPS 578 (630)
Q Consensus 549 ~gri~sf~ed~dGeLYvlts~gIyRiv~ps 578 (630)
+..+.+|+.+|+|.||.+.++.|||+.+++
T Consensus 40 w~~~~~laf~P~G~LYaV~~G~Ly~~~~~t 69 (236)
T 1tl2_A 40 WSNFKFLFLSPGGELYGVLNDKIYKGTPPT 69 (236)
T ss_dssp CTTCSEEEECTTSCEEEEETTEEEEESCCC
T ss_pred cccceeEEECCCccEEEEeCCeEEEECCCC
Confidence 457889999999999999778899998776
No 214
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=55.42 E-value=26 Score=36.72 Aligned_cols=71 Identities=8% Similarity=-0.024 Sum_probs=45.3
Q ss_pred CcEEEEEeeCceeeEEEcCCCCceEEEEe----------cCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCC--
Q 006811 139 GLCLEKIGNGSYLNMVAHPDGSNRAFFSN----------QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTE-- 206 (630)
Q Consensus 139 G~~le~va~Gl~~~ma~~pDGs~RlfV~e----------q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e-- 206 (630)
+=.+.+|..|..-.+++.|||. ++||+. +.+.|.+++. . +++.+ .++...+.
T Consensus 56 ~~v~~~i~vG~~P~i~~spDg~-~lyVan~~~~r~~~G~~~~~VsviD~-~--T~~vv------------~~I~v~~~~~ 119 (368)
T 1mda_H 56 GVTLGHSLGAFLSLAVAGHSGS-DFALASTSFARSAKGKRTDYVEVFDP-V--TFLPI------------ADIELPDAPR 119 (368)
T ss_dssp TEEEEEEEECTTCEEEECTTSS-CEEEEEEEETTTTSSSEEEEEEEECT-T--TCCEE------------EEEEETTSCS
T ss_pred CeEEEEEeCCCCCceEECCCCC-EEEEEcccccccccCCCCCEEEEEEC-C--CCCEE------------EEEECCCccc
Confidence 3345556666545899999996 899996 5788998863 2 22222 12222211
Q ss_pred ----CceeeeeeCCCCCCCCEEEEEE
Q 006811 207 ----FGLMGMAFHPNFAKNGRFFASF 228 (630)
Q Consensus 207 ----~GLLGiAfhPdF~~Ng~~YvsY 228 (630)
....+|+|+|| ..++||..
T Consensus 120 ~~~g~~P~~ia~SpD---Gk~lyVan 142 (368)
T 1mda_H 120 FSVGPRVHIIGNCAS---SACLLFFL 142 (368)
T ss_dssp CCBSCCTTSEEECTT---SSCEEEEE
T ss_pred cccCCCcceEEEcCC---CCEEEEEc
Confidence 23578999985 45799874
No 215
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=55.24 E-value=1.6e+02 Score=28.83 Aligned_cols=57 Identities=9% Similarity=0.132 Sum_probs=31.9
Q ss_pred eeEEE-----cC-CCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVA-----HP-DGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~-----~p-DGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..+++ .+ ||. .|+.+..+|.|+++++...... ........+..+-......++|+|+
T Consensus 25 ~~~~~~~s~~~~~d~~-~l~sgs~D~~v~iWd~~~~~~~---------~~~~~~~~~l~~h~~~V~~~~~~~~ 87 (343)
T 2xzm_R 25 TSIVAGFSQKENEDSP-VLISGSRDKTVMIWKLYEEEQN---------GYFGIPHKALTGHNHFVSDLALSQE 87 (343)
T ss_dssp EEEEECCCSSTTCCCC-EEEEEETTSCEEEEEECSSCCS---------SBSEEEEEEECCCSSCEEEEEECSS
T ss_pred hheeeEEEeecCCCCC-EEEEEcCCCEEEEEECCcCCcc---------cccccccchhccCCCceEEEEECCC
Confidence 66777 66 773 5666667999999875321100 0000001122334556789999984
No 216
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=54.92 E-value=1.4e+02 Score=29.06 Aligned_cols=59 Identities=12% Similarity=-0.002 Sum_probs=37.0
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEE
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFA 226 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Yv 226 (630)
..|++.|++.+.++.+..+|.|+++++. . ++.+. ..........++++|.-.....+++
T Consensus 103 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~--~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (408)
T 4a11_B 103 ETVQWYPHDTGMFTSSSFDKTLKVWDTN-T--LQTAD--------------VFNFEETVYSHHMSPVSTKHCLVAV 161 (408)
T ss_dssp EEEEECTTCTTCEEEEETTSEEEEEETT-T--TEEEE--------------EEECSSCEEEEEECSSCSSCCEEEE
T ss_pred EEEEEccCCCcEEEEEeCCCeEEEeeCC-C--Cccce--------------eccCCCceeeeEeecCCCCCcEEEE
Confidence 7889999665567777889999999753 2 22211 1123445678888886544444433
No 217
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=54.54 E-value=74 Score=31.07 Aligned_cols=26 Identities=8% Similarity=0.069 Sum_probs=21.5
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
..++|.|||. +|..+..+|.|+++++
T Consensus 17 ~~v~~s~~g~-~lasgs~D~~v~lwd~ 42 (316)
T 3bg1_A 17 HDAQMDYYGT-RLATCSSDRSVKIFDV 42 (316)
T ss_dssp EEEEECGGGC-EEEEEETTTEEEEEEE
T ss_pred EEeeEcCCCC-EEEEEeCCCeEEEEEe
Confidence 6789999995 6777778999999875
No 218
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=54.26 E-value=77 Score=30.29 Aligned_cols=70 Identities=6% Similarity=0.083 Sum_probs=40.3
Q ss_pred CCCcEEEEEeeCce---eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeee
Q 006811 137 PQGLCLEKIGNGSY---LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMA 213 (630)
Q Consensus 137 p~G~~le~va~Gl~---~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiA 213 (630)
++-+.++....|=. ..++++||+.+.|+-+..+|.|+++++.. +.... .+...+..+-......++
T Consensus 25 ~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~-~~~~~----------~~~~~~l~~h~~~V~~~~ 93 (340)
T 4aow_A 25 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTR-DETNY----------GIPQRALRGHSHFVSDVV 93 (340)
T ss_dssp -CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECC-SSSCS----------EEEEEEECCCSSCEEEEE
T ss_pred CCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC-CCccc----------ceeeEEEeCCCCCEEEEE
Confidence 34455554444533 78999999654455567899999987632 21100 000112223356688999
Q ss_pred eCCC
Q 006811 214 FHPN 217 (630)
Q Consensus 214 fhPd 217 (630)
|+|+
T Consensus 94 ~s~d 97 (340)
T 4aow_A 94 ISSD 97 (340)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 9984
No 219
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=53.74 E-value=1.1e+02 Score=36.13 Aligned_cols=50 Identities=16% Similarity=0.146 Sum_probs=34.7
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
+.++++|||. ++..+..+|.|+++++. .+ +.+ ............++|+|+
T Consensus 619 ~~~~~s~~~~-~l~s~~~d~~i~vw~~~-~~--~~~-------------~~~~~h~~~v~~~~~s~~ 668 (1249)
T 3sfz_A 619 YHACFSQDGQ-RIASCGADKTLQVFKAE-TG--EKL-------------LDIKAHEDEVLCCAFSSD 668 (1249)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEETT-TC--CEE-------------EEECCCSSCEEEEEECTT
T ss_pred EEEEECCCCC-EEEEEeCCCeEEEEECC-CC--CEE-------------EEeccCCCCEEEEEEecC
Confidence 7899999995 67777889999999752 22 221 111234567899999984
No 220
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=53.72 E-value=2.5e+02 Score=30.58 Aligned_cols=18 Identities=11% Similarity=0.137 Sum_probs=14.1
Q ss_pred cceeeeecCCCCCeeEEEe
Q 006811 395 NPWRCSFDSDRPSYFMCAD 413 (630)
Q Consensus 395 NP~r~afD~~~g~~l~~~D 413 (630)
-|+.+++++.. .+||++.
T Consensus 382 gPr~~~lSpDG-k~LyVaN 399 (462)
T 2ece_A 382 APQMLEISRDG-RRVYVTN 399 (462)
T ss_dssp CCCCEEECTTS-SEEEEEC
T ss_pred CCCEEEEcCCC-CEEEEEc
Confidence 48889999874 5788875
No 221
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=53.38 E-value=1.6e+02 Score=28.30 Aligned_cols=39 Identities=10% Similarity=0.109 Sum_probs=26.3
Q ss_pred CcEEEEEeeCce---eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 139 GLCLEKIGNGSY---LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 139 G~~le~va~Gl~---~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
+.+++....|-. ..++|.|++...+..+..+|.|+++++
T Consensus 129 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~ 170 (304)
T 2ynn_A 129 NWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL 170 (304)
T ss_dssp TTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEET
T ss_pred CcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 334444444432 778999954446777778999999975
No 222
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=52.85 E-value=20 Score=36.53 Aligned_cols=61 Identities=15% Similarity=0.185 Sum_probs=38.6
Q ss_pred EEEEEeeCceeeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 141 CLEKIGNGSYLNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 141 ~le~va~Gl~~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
.+..+..|-.++|++.|||. +||++.+ +.|.+++. +.+.-+.+ ..+ ..-..+..+|+|+|+
T Consensus 298 ~v~~i~~~~p~~ia~spdg~-~l~v~n~-~~v~v~D~-~t~~l~~~------------~~i-~~~G~~P~~~~~~p~ 358 (361)
T 2oiz_A 298 RVARIPGRDALSMTIDQQRN-LMLTLDG-GNVNVYDI-SQPEPKLL------------RTI-EGAAEASLQVQFHPV 358 (361)
T ss_dssp EEEEEECTTCCEEEEETTTT-EEEEECS-SCEEEEEC-SSSSCEEE------------EEE-TTSCSSEEEEEECCC
T ss_pred EEEEEecCCeeEEEECCCCC-EEEEeCC-CeEEEEEC-CCCcceee------------EEe-ccCCCCcEEEEecCC
Confidence 34444433268999999997 8999998 99999863 22210222 111 122356789999995
No 223
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=52.62 E-value=94 Score=36.35 Aligned_cols=26 Identities=19% Similarity=0.225 Sum_probs=21.8
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
..++++|||. +|.++...+.|+++++
T Consensus 382 ~~~~~SpDG~-~la~~~~~~~v~~~d~ 407 (1045)
T 1k32_A 382 FAMGVDRNGK-FAVVANDRFEIMTVDL 407 (1045)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEET
T ss_pred eeeEECCCCC-EEEEECCCCeEEEEEC
Confidence 6789999995 6777788899999875
No 224
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=52.54 E-value=36 Score=32.88 Aligned_cols=59 Identities=14% Similarity=0.170 Sum_probs=38.6
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEee
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFNC 230 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs~ 230 (630)
..|+++|||. .|+.+..+|.|+++++. . ++.+. ..........+++|+|+ |.+.++-+.
T Consensus 277 ~~~~~sp~~~-~l~s~~~dg~i~iwd~~-~--~~~~~-------------~~~~~~~~v~~~~~s~~----g~~l~~~s~ 335 (368)
T 3mmy_A 277 NGIAFHPVHG-TLATVGSDGRFSFWDKD-A--RTKLK-------------TSEQLDQPISACCFNHN----GNIFAYASS 335 (368)
T ss_dssp EEEEECTTTC-CEEEEETTSCEEEEETT-T--TEEEE-------------ECCCCSSCEEEEEECTT----SSCEEEEEC
T ss_pred EEEEEecCCC-EEEEEccCCeEEEEECC-C--CcEEE-------------EecCCCCCceEEEECCC----CCeEEEEec
Confidence 5789999995 67777789999999853 2 22221 11123556889999984 554444443
No 225
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=51.80 E-value=1.2e+02 Score=29.14 Aligned_cols=54 Identities=11% Similarity=0.096 Sum_probs=32.2
Q ss_pred EcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEE
Q 006811 155 AHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFA 226 (630)
Q Consensus 155 ~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Yv 226 (630)
+.|||. .++++..+|.|+++++. .+ +.+ .....+.....++|+|.-....+|++
T Consensus 176 ~~~~~~-~l~~~~~d~~i~i~d~~-~~--~~~--------------~~~~~~~~v~~~~~~~~~~~~~~l~~ 229 (357)
T 3i2n_A 176 YNQEER-VVCAGYDNGDIKLFDLR-NM--ALR--------------WETNIKNGVCSLEFDRKDISMNKLVA 229 (357)
T ss_dssp CC-CCC-EEEEEETTSEEEEEETT-TT--EEE--------------EEEECSSCEEEEEESCSSSSCCEEEE
T ss_pred cCCCCC-EEEEEccCCeEEEEECc-cC--cee--------------eecCCCCceEEEEcCCCCCCCCEEEE
Confidence 778885 56667788999999752 11 111 11223556889999984323444444
No 226
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=49.74 E-value=1.3e+02 Score=32.86 Aligned_cols=26 Identities=31% Similarity=0.603 Sum_probs=20.6
Q ss_pred eeEEEcCCCCceEEEEec-Cc-----eEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQ-EG-----KIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq-~G-----~V~~~~~ 177 (630)
..++++|||. +|+.+.. +| .||++++
T Consensus 40 ~~~~~SpdG~-~la~~~~~d~~~~~~~i~~~d~ 71 (741)
T 2ecf_A 40 MKPKVAPDGS-RVTFLRGKDSDRNQLDLWSYDI 71 (741)
T ss_dssp EEEEECTTSS-EEEEEECCSSCTTEEEEEEEET
T ss_pred CCceEecCCC-EEEEEeccCCCCcccEEEEEEC
Confidence 6789999996 5666665 77 8999875
No 227
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=49.49 E-value=1.5e+02 Score=34.82 Aligned_cols=50 Identities=12% Similarity=0.030 Sum_probs=34.6
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..++|+|||. .+..+..+|.|+++++. . ++.+ ............++|+|+
T Consensus 661 ~~~~~s~~~~-~l~s~~~d~~v~vwd~~-~--~~~~-------------~~~~~~~~~v~~~~~~~~ 710 (1249)
T 3sfz_A 661 LCCAFSSDDS-YIATCSADKKVKIWDSA-T--GKLV-------------HTYDEHSEQVNCCHFTNK 710 (1249)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETT-T--CCEE-------------EEEECCSSCEEEEEECSS
T ss_pred EEEEEecCCC-EEEEEeCCCeEEEEECC-C--CceE-------------EEEcCCCCcEEEEEEecC
Confidence 7899999995 66677789999999752 2 2222 112234567889999984
No 228
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=49.31 E-value=1.1e+02 Score=29.83 Aligned_cols=55 Identities=16% Similarity=0.006 Sum_probs=29.9
Q ss_pred eEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 162 RAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 162 RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
++..+..+|.|+++++...+..+.+ .....-.....+++|+|+...++.+.++-+
T Consensus 181 ~l~sgs~D~~v~lWd~~~~~~~~~~-------------~~l~~h~~~V~~v~~sp~~~~~~~~las~s 235 (316)
T 3bg1_A 181 RFASGGCDNLIKLWKEEEDGQWKEE-------------QKLEAHSDWVRDVAWAPSIGLPTSTIASCS 235 (316)
T ss_dssp BEECCBTTSBCCEEEECTTSCEEEE-------------ECCBCCSSCEEEEECCCCSSCSCCEEEEEE
T ss_pred eEEEecCCCeEEEEEeCCCCcccee-------------eecccCCCceEEEEecCCCCCCCceEEEEc
Confidence 4555567899888875221110111 011122345789999998654445555544
No 229
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=49.19 E-value=2.9e+02 Score=29.98 Aligned_cols=26 Identities=15% Similarity=0.161 Sum_probs=19.2
Q ss_pred eeEEEcCCCCceEEEEecC-----ceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQE-----GKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~-----G~V~~~~~ 177 (630)
..++++|||. +++++..+ ..|+++++
T Consensus 261 ~~~~~spdg~-~l~~~~~~~~~~~~~v~~~d~ 291 (706)
T 2z3z_A 261 TNLSWSPDEN-ILYVAEVNRAQNECKVNAYDA 291 (706)
T ss_dssp EEEEECTTSS-EEEEEEECTTSCEEEEEEEET
T ss_pred eeEEEECCCC-EEEEEEeCCCCCeeEEEEEEC
Confidence 5789999995 57775544 38888874
No 230
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=49.15 E-value=41 Score=32.40 Aligned_cols=53 Identities=11% Similarity=0.097 Sum_probs=34.6
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..+++.|||. .++++..+|.|+++++.. +.... . .............++|+|+
T Consensus 15 ~~~~~s~~~~-~l~~~~~d~~v~iw~~~~-~~~~~-~-----------~~~~~~~~~~v~~~~~~~~ 67 (342)
T 1yfq_A 15 SDIKIIPSKS-LLLITSWDGSLTVYKFDI-QAKNV-D-----------LLQSLRYKHPLLCCNFIDN 67 (342)
T ss_dssp EEEEEEGGGT-EEEEEETTSEEEEEEEET-TTTEE-E-----------EEEEEECSSCEEEEEEEES
T ss_pred EEEEEcCCCC-EEEEEcCCCeEEEEEeCC-CCccc-c-----------ceeeeecCCceEEEEECCC
Confidence 6789999985 677778899999987632 21100 0 0112234567888999985
No 231
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=48.88 E-value=2e+02 Score=32.18 Aligned_cols=52 Identities=13% Similarity=0.219 Sum_probs=35.2
Q ss_pred eeEEEcCC--CCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPD--GSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pD--Gs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..++++|+ |. .++++..+|.|+++++.. +.. . ..............++|+|.
T Consensus 103 ~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~-~~~--~-----------~~~~~~~~~~~v~~l~~~p~ 156 (753)
T 3jro_A 103 NSVQWAPHEYGP-LLLVASSDGKVSVVEFKE-NGT--T-----------SPIIIDAHAIGVNSASWAPA 156 (753)
T ss_dssp EEEEECCGGGCS-EEEEEETTSEEEEEECCS-SSC--C-----------CCEEEECCSSCEEEEEECCC
T ss_pred EEEEECCCCCCC-EEEEEeCCCcEEEEEeec-CCC--c-----------ceeEeecCCCceEEEEecCc
Confidence 78999999 64 678888899999998532 210 0 01122344567899999985
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=48.52 E-value=46 Score=36.34 Aligned_cols=62 Identities=10% Similarity=0.010 Sum_probs=42.2
Q ss_pred eeEEEcCCCCceEEEEec-CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCC-------------CceeeeeeCC
Q 006811 151 LNMVAHPDGSNRAFFSNQ-EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTE-------------FGLMGMAFHP 216 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq-~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e-------------~GLLGiAfhP 216 (630)
..+..+|||. +|||+.+ .+.|.++++.+.+..+.+ ..|..++. .|.-+|++.|
T Consensus 324 a~I~lS~DGr-fLYVSnrg~d~VavfdV~d~~~~~lv------------~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSp 390 (462)
T 2ece_A 324 TDIDISLDDK-FLYLSLWGIGEVRQYDISNPFKPVLT------------GKVKLGGIFHRADHPAGHKLTGAPQMLEISR 390 (462)
T ss_dssp CCEEECTTSC-EEEEEETTTTEEEEEECSSTTSCEEE------------EEEECBTTTTCBCCTTSCCCCSCCCCEEECT
T ss_pred eEEEECCCCC-EEEEEeCCCCEEEEEEecCCCCcEEE------------EEEEeCCeeccccccccccCCCCCCEEEEcC
Confidence 6788999996 7999998 689999886433322211 23333322 3678899998
Q ss_pred CCCCCCEEEEEE
Q 006811 217 NFAKNGRFFASF 228 (630)
Q Consensus 217 dF~~Ng~~YvsY 228 (630)
| ..++||.-
T Consensus 391 D---Gk~LyVaN 399 (462)
T 2ece_A 391 D---GRRVYVTN 399 (462)
T ss_dssp T---SSEEEEEC
T ss_pred C---CCEEEEEc
Confidence 5 45788865
No 233
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=48.27 E-value=2.2e+02 Score=28.26 Aligned_cols=51 Identities=14% Similarity=0.192 Sum_probs=30.9
Q ss_pred eeEEEcCCCC-ceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGS-NRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs-~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..+.++|+.. +.++.+..+|.|+++++. . ++.+ .....-+.....++|+|+
T Consensus 200 ~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~-~--~~~~-------------~~~~~h~~~v~~v~~~p~ 251 (354)
T 2pbi_B 200 LCLDLAPSETGNTFVSGGCDKKAMVWDMR-S--GQCV-------------QAFETHESDVNSVRYYPS 251 (354)
T ss_dssp EEEEECCCSSCCEEEEEETTSCEEEEETT-T--CCEE-------------EEECCCSSCEEEEEECTT
T ss_pred EEEEEEeCCCCCEEEEEeCCCeEEEEECC-C--CcEE-------------EEecCCCCCeEEEEEeCC
Confidence 4566776432 356667789999999752 2 2221 112223456789999984
No 234
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=48.19 E-value=3.1e+02 Score=30.06 Aligned_cols=50 Identities=12% Similarity=0.026 Sum_probs=35.0
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..++|+|||. ++.++..+|.|+++++. .+ +.+ ............++|+|+
T Consensus 59 ~~~~~s~~~~-~l~~~~~dg~i~vw~~~-~~--~~~-------------~~~~~~~~~v~~~~~s~~ 108 (814)
T 3mkq_A 59 RAGKFIARKN-WIIVGSDDFRIRVFNYN-TG--EKV-------------VDFEAHPDYIRSIAVHPT 108 (814)
T ss_dssp EEEEEEGGGT-EEEEEETTSEEEEEETT-TC--CEE-------------EEEECCSSCEEEEEECSS
T ss_pred EEEEEeCCCC-EEEEEeCCCeEEEEECC-CC--cEE-------------EEEecCCCCEEEEEEeCC
Confidence 7899999995 67778889999999753 22 221 112234456889999985
No 235
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=46.45 E-value=2.4e+02 Score=29.38 Aligned_cols=27 Identities=7% Similarity=0.020 Sum_probs=23.2
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
..++|.|||..+++.+..+|.|+++++
T Consensus 164 ~~~~~~~~~~~~l~~~~~d~~v~vwd~ 190 (615)
T 1pgu_A 164 NACHLKQSRPMRSMTVGDDGSVVFYQG 190 (615)
T ss_dssp EEEEECSSSSCEEEEEETTTEEEEEET
T ss_pred EEEEECCCCCcEEEEEeCCCcEEEEeC
Confidence 789999999766888888999999974
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=46.44 E-value=1.6e+02 Score=28.02 Aligned_cols=20 Identities=20% Similarity=0.383 Sum_probs=15.7
Q ss_pred ceeeEEcCCCCeEEEEeCCCC
Q 006811 308 GGQLLFGPTDGYMYFMMGDGG 328 (630)
Q Consensus 308 GG~L~FGp~DG~LYv~~GDgg 328 (630)
...+.+++ ||.|||++-+|.
T Consensus 297 ~~~~~~d~-~g~l~~gt~~G~ 316 (330)
T 3hxj_A 297 IATPVIDE-NGTIYFGTRNGK 316 (330)
T ss_dssp CSCCEECT-TCCEEEECTTSC
T ss_pred ccceEEcC-CCEEEEEcCCCe
Confidence 44678888 999999887764
No 237
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=46.00 E-value=1.9e+02 Score=26.95 Aligned_cols=61 Identities=18% Similarity=0.153 Sum_probs=39.1
Q ss_pred CcEEEEEeeCce---eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeC
Q 006811 139 GLCLEKIGNGSY---LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFH 215 (630)
Q Consensus 139 G~~le~va~Gl~---~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfh 215 (630)
++.+.....|-. ..|++ |||. +++.+..+|.|+++++. .+ +.+ .+....+.....++|+
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~~~-~l~s~~~dg~v~vw~~~-~~--~~~-------------~~~~~~~~~v~~~~~~ 68 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VDDS-KVASVSRDGTVRLWSKD-DQ--WLG-------------TVVYTGQGFLNSVCYD 68 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EETT-EEEEEETTSEEEEEEES-SS--EEE-------------EEEEECSSCEEEEEEE
T ss_pred cHHHHHHhhCCCCCcEEEEe-cCCC-EEEEEEcCCcEEEEECC-CC--EEE-------------EEeecCCccEEEEEEC
Confidence 445555444433 67888 8885 78888899999999752 21 111 1222346678899999
Q ss_pred CC
Q 006811 216 PN 217 (630)
Q Consensus 216 Pd 217 (630)
|+
T Consensus 69 ~~ 70 (313)
T 3odt_A 69 SE 70 (313)
T ss_dssp TT
T ss_pred CC
Confidence 83
No 238
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=44.59 E-value=58 Score=33.59 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=24.2
Q ss_pred EEEEeeCceeeEEEcCCCCceEEEEe----------cCceEEEEE
Q 006811 142 LEKIGNGSYLNMVAHPDGSNRAFFSN----------QEGKIWLAT 176 (630)
Q Consensus 142 le~va~Gl~~~ma~~pDGs~RlfV~e----------q~G~V~~~~ 176 (630)
+.+|..|..-.++++|||. ++||+. +.+.|.+++
T Consensus 60 ~~~i~~g~~p~i~~spDg~-~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 60 LGHVNGGFLPNPVAAHSGS-EFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred EEEecCCCCCCeEECCCCC-EEEEEeccccccccCCCCCeEEEEE
Confidence 3445445445899999996 899996 356687776
No 239
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=43.36 E-value=3.3e+02 Score=29.70 Aligned_cols=50 Identities=18% Similarity=0.289 Sum_probs=34.2
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..++++|||. +|+.+..+|.|+++++. . ++.+ .....-......++|+|+
T Consensus 434 ~~v~~s~~g~-~l~sgs~Dg~v~vwd~~-~--~~~~-------------~~~~~h~~~v~~~~~s~~ 483 (694)
T 3dm0_A 434 EDVVLSSDGQ-FALSGSWDGELRLWDLA-A--GVST-------------RRFVGHTKDVLSVAFSLD 483 (694)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETT-T--TEEE-------------EEEECCSSCEEEEEECTT
T ss_pred EEEEECCCCC-EEEEEeCCCcEEEEECC-C--Ccce-------------eEEeCCCCCEEEEEEeCC
Confidence 6799999995 56667789999999853 2 2211 122234456889999984
No 240
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=42.45 E-value=25 Score=35.70 Aligned_cols=60 Identities=22% Similarity=0.389 Sum_probs=37.1
Q ss_pred EEEcCCCCceEEEEe-cCceEEEEEccCCCCCceeeecCCCCCcCCcc---ce---eeCCCCceeeeeeCCCCCCCCEEE
Q 006811 153 MVAHPDGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLTD---EV---HFDTEFGLMGMAFHPNFAKNGRFF 225 (630)
Q Consensus 153 ma~~pDGs~RlfV~e-q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~---~V---~~~~e~GLLGiAfhPdF~~Ng~~Y 225 (630)
|.+. || ++|+.. +...|.+++ |+. ++.+. .+|++. .. ....+.-|-|||++|+ .++||
T Consensus 186 Le~~-dG--~lyanvw~s~~I~vID-p~T--G~V~~------~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~---~~rlf 250 (268)
T 3nok_A 186 LECA-NG--VIYANIWHSSDVLEID-PAT--GTVVG------VIDASALTRAVAGQVTNPEAVLNGIAVEPG---SGRIF 250 (268)
T ss_dssp EEEE-TT--EEEEEETTCSEEEEEC-TTT--CBEEE------EEECHHHHHHHTTTCCCTTCCEEEEEECTT---TCCEE
T ss_pred cEEe-CC--EEEEEECCCCeEEEEe-CCC--CcEEE------EEECCCCcccccccccCcCCceEEEEEcCC---CCEEE
Confidence 4444 77 799888 578888886 544 33332 133321 11 1223457899999984 67899
Q ss_pred EE
Q 006811 226 AS 227 (630)
Q Consensus 226 vs 227 (630)
|.
T Consensus 251 VT 252 (268)
T 3nok_A 251 MT 252 (268)
T ss_dssp EE
T ss_pred Ee
Confidence 84
No 241
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=42.03 E-value=2.5e+02 Score=28.57 Aligned_cols=27 Identities=15% Similarity=0.177 Sum_probs=21.3
Q ss_pred eeEEEcCC---CCceEEEEecCceEEEEEcc
Q 006811 151 LNMVAHPD---GSNRAFFSNQEGKIWLATIP 178 (630)
Q Consensus 151 ~~ma~~pD---Gs~RlfV~eq~G~V~~~~~p 178 (630)
..|+++|| |. .|+.+..+|.|+++++.
T Consensus 199 ~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 199 TDVHLIKDSDGHQ-FIITSDRDEHIKISHYP 228 (450)
T ss_dssp EEEEEEECTTSCE-EEEEEETTSCEEEEEES
T ss_pred EEEEEcCCCCCCc-EEEEEcCCCcEEEEECC
Confidence 67899999 63 56667789999999863
No 242
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=40.71 E-value=2.2e+02 Score=30.03 Aligned_cols=22 Identities=14% Similarity=0.221 Sum_probs=15.5
Q ss_pred CceeeeeeCCCCCC-CCEEEEEE
Q 006811 207 FGLMGMAFHPNFAK-NGRFFASF 228 (630)
Q Consensus 207 ~GLLGiAfhPdF~~-Ng~~YvsY 228 (630)
.|..|||++|+-.. ++++|...
T Consensus 220 ~Gi~gIaLsp~~~~~~~~LYf~p 242 (381)
T 3q6k_A 220 AGIFGITLGDRDSEGNRPAYYLA 242 (381)
T ss_dssp CCEEEEEECCCCTTSCCEEEEEE
T ss_pred cCceEEEecCCcCCCCeEEEEEE
Confidence 59999999998554 34555433
No 243
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=40.31 E-value=2.9e+02 Score=27.48 Aligned_cols=59 Identities=14% Similarity=0.215 Sum_probs=34.9
Q ss_pred eeEEEcC-CCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEEe
Q 006811 151 LNMVAHP-DGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASFN 229 (630)
Q Consensus 151 ~~ma~~p-DGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsYs 229 (630)
..+++.+ ++ +.++....+|.|+++++...+ +.+ ....+-+.....++|+|+ +..+++-+
T Consensus 209 ~~~~~~~~~~-~~l~sgs~D~~v~~wd~~~~~--~~~-------------~~~~~h~~~v~~v~~~p~----~~~l~s~s 268 (380)
T 3iz6_a 209 LSLSINSLNA-NMFISGSCDTTVRLWDLRITS--RAV-------------RTYHGHEGDINSVKFFPD----GQRFGTGS 268 (380)
T ss_dssp EEEEECSSSC-CEEEEEETTSCEEEEETTTTC--CCC-------------EEECCCSSCCCEEEECTT----SSEEEEEC
T ss_pred EEEEeecCCC-CEEEEEECCCeEEEEECCCCC--cce-------------EEECCcCCCeEEEEEecC----CCeEEEEc
Confidence 5677776 55 345556679999999753111 111 122234556789999984 55555443
No 244
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=40.05 E-value=65 Score=36.22 Aligned_cols=101 Identities=20% Similarity=0.288 Sum_probs=50.4
Q ss_pred eeEEcCCCCeEEEEeCCCCCCC---Cccccc-ccCCCCCeeEEEEecCCCCchhhhhhcccCCCccCCCCCCCCCCCC--
Q 006811 310 QLLFGPTDGYMYFMMGDGGGTA---DPYNFS-QNKKSLLGKITRLDVDNIPSAAEIEKLGLWGSYSIPKDNPFSEDSG-- 383 (630)
Q Consensus 310 ~L~FGp~DG~LYv~~GDgg~~~---DP~~~a-Qn~~sl~GKILRIdvDg~p~~~~~~~~~~~g~YsIP~DNPF~~~~~-- 383 (630)
.|.+.|.||.+|+++=+++..+ .+...+ .......|.|+|+++++.... .....|-.+-+ ..+|-.....
T Consensus 388 gi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~---a~~f~w~~~v~-~g~p~~~~~~~~ 463 (592)
T 3zwu_A 388 WIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHA---SKTFAWDLFVV-AGNPSVHAGTPK 463 (592)
T ss_dssp EEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTT---CSEEEEEEEEE-CCCTTTSTTSGG
T ss_pred eeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccc---cceeEEEEEEe-ccCccccccccc
Confidence 4778887999999975544321 111111 112346899999988752111 01112222211 1222111000
Q ss_pred -CCCeEE-EeccccceeeeecCCCCCeeEEEeccC
Q 006811 384 -LQPEIW-ALGLRNPWRCSFDSDRPSYFMCADVGQ 416 (630)
Q Consensus 384 -~~pEI~-A~GlRNP~r~afD~~~g~~l~~~DvG~ 416 (630)
...++. .-+|.||=.++||+. | +||+.+=|.
T Consensus 464 ~~~~~~~~~~~f~~PDNL~fd~~-G-~LwI~eDg~ 496 (592)
T 3zwu_A 464 GGSSNITPQNMFNSPDGLGFDKA-G-RLWILTDGD 496 (592)
T ss_dssp GCCTTCCTTTCCCCEEEEEECTT-C-CEEEEECCC
T ss_pred ccccccCCCCCccCCcceEECCC-C-CEEEEecCC
Confidence 000000 124789999999997 4 487766543
No 245
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=39.19 E-value=3e+02 Score=27.29 Aligned_cols=17 Identities=12% Similarity=0.204 Sum_probs=12.0
Q ss_pred eeeEEcCCCCeEEEEeCC
Q 006811 309 GQLLFGPTDGYMYFMMGD 326 (630)
Q Consensus 309 G~L~FGp~DG~LYv~~GD 326 (630)
-.|.|.+ ++.+|+..++
T Consensus 253 ~~v~~~~-~~~~~~~g~~ 269 (327)
T 2xbg_A 253 LDLAYRT-PNEVWLAGGA 269 (327)
T ss_dssp EEEEESS-SSCEEEEEST
T ss_pred EEEEecC-CCEEEEEeCC
Confidence 3577887 7888887553
No 246
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=38.93 E-value=56 Score=34.16 Aligned_cols=59 Identities=15% Similarity=0.205 Sum_probs=37.6
Q ss_pred EEEEEeeCce-eeEEEcCCCCceEEEEec--CceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 141 CLEKIGNGSY-LNMVAHPDGSNRAFFSNQ--EGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 141 ~le~va~Gl~-~~ma~~pDGs~RlfV~eq--~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
.+.+|..|-. ++|++.|||. ++||+.+ .+.|.+++. .+++.++ .+ .-.++..+|++|++
T Consensus 306 vv~~i~vg~~p~gi~~s~Dg~-~l~va~~~~~~~VsVID~---~t~kvv~------------~I--~vg~~P~~i~~~~~ 367 (368)
T 1mda_H 306 TSGPISNGHDSDAIIAAQDGA-SDNYANSAGTEVLDIYDA---ASDQDQS------------SV--ELDKGPESLSVQNE 367 (368)
T ss_dssp EEECCEEEEEECEEEECCSSS-CEEEEEETTTTEEEEEES---SSCEEEE------------EC--CCCSCCCEEECCCC
T ss_pred EEEEEECCCCcceEEECCCCC-EEEEEccCCCCeEEEEEC---CCCcEEE------------EE--ECCCCCCEEEeecC
Confidence 3444444544 9999999996 5777776 799999874 2233221 12 12356778888864
No 247
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=37.55 E-value=2.6e+02 Score=32.42 Aligned_cols=26 Identities=4% Similarity=-0.009 Sum_probs=21.5
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
..|+|+|||. .|.++..+|.|++++.
T Consensus 21 ~~lafspdg~-~lAsgs~Dg~I~lw~~ 46 (902)
T 2oaj_A 21 IAAAFDFTQN-LLAIATVTGEVHIYGQ 46 (902)
T ss_dssp EEEEEETTTT-EEEEEETTSEEEEECS
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEeC
Confidence 7899999995 5666778999999863
No 248
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=37.12 E-value=3e+02 Score=31.83 Aligned_cols=26 Identities=12% Similarity=0.024 Sum_probs=22.0
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
+.++|.|||. .|-++..+|.|+++++
T Consensus 492 ~svafspdg~-~LAsgs~DgtV~lwd~ 517 (902)
T 2oaj_A 492 DKISFAAETL-ELAVSIETGDVVLFKY 517 (902)
T ss_dssp EEEEEETTTT-EEEEEETTSCEEEEEE
T ss_pred eEEEecCCCC-eEEEEecCcEEEEEEe
Confidence 7899999995 5677778999999876
No 249
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=37.02 E-value=49 Score=35.47 Aligned_cols=26 Identities=4% Similarity=-0.146 Sum_probs=21.4
Q ss_pred eeEEEcCCCCceEEEEecCc--eEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEG--KIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G--~V~~~~~ 177 (630)
..++|+|||. +|+..++.| +||++++
T Consensus 198 ~~~~~SpDG~-~l~~~~~~~~~~i~~~d~ 225 (582)
T 3o4h_A 198 SSASISPGMK-VTAGLETAREARLVTVDP 225 (582)
T ss_dssp EEEEECTTSC-EEEEEECSSCEEEEEECT
T ss_pred ccceECCCCC-EEEEccCCCeeEEEEEcC
Confidence 7899999996 677777888 8998864
No 250
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=35.25 E-value=2.5e+02 Score=31.40 Aligned_cols=22 Identities=14% Similarity=0.354 Sum_probs=17.3
Q ss_pred eeeeeeCCCCCCCCEEEEEEeecCC
Q 006811 209 LMGMAFHPNFAKNGRFFASFNCDKV 233 (630)
Q Consensus 209 LLGiAfhPdF~~Ng~~YvsYs~~~~ 233 (630)
.=|+++|| .+|.+|+..|....
T Consensus 386 pEgi~~~p---~~g~vY~a~Tn~~~ 407 (592)
T 3zwu_A 386 PEWIVVSP---KDGQVYCTLTNNAK 407 (592)
T ss_dssp EEEEEECT---TTCCEEEEECCBTT
T ss_pred cceeEEcC---CCCEEEEEecCCcc
Confidence 46899998 58999999986543
No 251
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=32.92 E-value=1.9e+02 Score=32.25 Aligned_cols=26 Identities=15% Similarity=0.214 Sum_probs=18.2
Q ss_pred eeEEEcCCCCceE-EEEecCc----eEEEEEc
Q 006811 151 LNMVAHPDGSNRA-FFSNQEG----KIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~Rl-fV~eq~G----~V~~~~~ 177 (630)
..++++|||. +| |..++.| .||++++
T Consensus 166 ~~~~~SPDG~-~la~~~~~~G~e~~~i~v~dl 196 (741)
T 1yr2_A 166 DAWAASDDGR-LLAYSVQDGGSDWRTVKFVGV 196 (741)
T ss_dssp EEEEECTTSS-EEEEEEEETTCSEEEEEEEET
T ss_pred EeEEECCCCC-EEEEEEcCCCCceEEEEEEEC
Confidence 5689999996 44 4445555 4888875
No 252
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=32.22 E-value=1.8e+02 Score=29.47 Aligned_cols=70 Identities=14% Similarity=0.230 Sum_probs=41.4
Q ss_pred CcEEEEEeeCce-eeEEEcCCCCceEEEEe--cCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeC
Q 006811 139 GLCLEKIGNGSY-LNMVAHPDGSNRAFFSN--QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFH 215 (630)
Q Consensus 139 G~~le~va~Gl~-~~ma~~pDGs~RlfV~e--q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfh 215 (630)
|-++..+..+.. ..+++.|++. .++++. .+|.|++++.+. ++.+. ...+-+...++++|+
T Consensus 311 ~~~~~~~~~~~~v~~~~~~~~~~-~lv~~sg~~d~~I~iwd~~~---~~~v~-------------~l~gH~~~V~~l~~s 373 (420)
T 4gga_A 311 GACLSAVDAHSQVCSILWSPHYK-ELISGHGFAQNQLVIWKYPT---MAKVA-------------ELKGHTSRVLSLTMS 373 (420)
T ss_dssp TEEEEEEECSSCEEEEEEETTTT-EEEEEECTTTCCEEEEETTT---CCEEE-------------EECCCSSCEEEEEEC
T ss_pred cccceeeccccceeeeeecCCCC-eEEEEEecCCCEEEEEECCC---CcEEE-------------EEcCCCCCEEEEEEc
Confidence 334444444433 7788999985 455554 589999998642 22221 111224568999999
Q ss_pred CCCCCCCEEEEEEe
Q 006811 216 PNFAKNGRFFASFN 229 (630)
Q Consensus 216 PdF~~Ng~~YvsYs 229 (630)
|+ |.+.++-+
T Consensus 374 pd----g~~l~S~s 383 (420)
T 4gga_A 374 PD----GATVASAA 383 (420)
T ss_dssp TT----SSCEEEEE
T ss_pred CC----CCEEEEEe
Confidence 84 55555443
No 253
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=31.79 E-value=2e+02 Score=32.32 Aligned_cols=54 Identities=15% Similarity=0.123 Sum_probs=31.2
Q ss_pred ccCCCCccceeeEEcCCCCeEEEEeCCCCCCCCcccccccCCCCCeeEEEEecCC
Q 006811 300 GLSFNGHHGGQLLFGPTDGYMYFMMGDGGGTADPYNFSQNKKSLLGKITRLDVDN 354 (630)
Q Consensus 300 ~~P~~~H~GG~L~FGp~DG~LYv~~GDgg~~~DP~~~aQn~~sl~GKILRIdvDg 354 (630)
+++...-+.+.+...+ ||.||+++-+|-..-||.....+.....=.|-+|.+++
T Consensus 622 Gl~~~~f~~~~~~~~~-~G~l~~g~~~Gl~~f~p~~~~~~~~~~~v~it~~~v~~ 675 (781)
T 3v9f_A 622 NIPQGSFISGCVTKDH-NGLIYFGSINGLCFFNPDIAINSPQIPPVVITKVRIPG 675 (781)
T ss_dssp TCCSSCEEEEEEEECT-TSCEEEEETTEEEEECSCCGGGSSCCCCCEEEEEECCC
T ss_pred CccccccccCceEECC-CCEEEEECCCceEEEChhhccccCCCCCEEEEEEEECC
Confidence 3444433456778888 99999999887544455332222222233355666666
No 254
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=31.29 E-value=3.4e+02 Score=25.64 Aligned_cols=51 Identities=8% Similarity=0.086 Sum_probs=33.1
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCC-C
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHP-N 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhP-d 217 (630)
..|++.|++ ++++..+|.|+++++...+.. .. .............++|+| +
T Consensus 154 ~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~-~~------------~~~~~~~~~~i~~i~~~~~~ 205 (342)
T 1yfq_A 154 FTMDTNSSR---LIVGMNNSQVQWFRLPLCEDD-NG------------TIEESGLKYQIRDVALLPKE 205 (342)
T ss_dssp EEEEECSSE---EEEEESTTEEEEEESSCCTTC-CC------------EEEECSCSSCEEEEEECSGG
T ss_pred EEEEecCCc---EEEEeCCCeEEEEECCccccc-cc------------eeeecCCCCceeEEEECCCC
Confidence 678889886 999999999999985320210 00 011223345678999998 5
No 255
>2b4w_A Hypothetical protein, conserved; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.98A {Leishmania major} SCOP: b.67.2.5
Probab=30.54 E-value=2.3e+02 Score=29.23 Aligned_cols=22 Identities=23% Similarity=0.437 Sum_probs=17.9
Q ss_pred ccceeeEEcCCCCe--EEEEeCCCC
Q 006811 306 HHGGQLLFGPTDGY--MYFMMGDGG 328 (630)
Q Consensus 306 H~GG~L~FGp~DG~--LYv~~GDgg 328 (630)
-..|.|+.-+ ||+ ||-.+||..
T Consensus 264 vFsgGlv~r~-DG~~~LYaGi~Dae 287 (315)
T 2b4w_A 264 VFASGIVMRS-DGKVDLYSGVGDSH 287 (315)
T ss_dssp EEEEEEEECT-TSCEEEEEEETTTE
T ss_pred ecccceEECC-CCCEEEEeecchhh
Confidence 3457899988 996 999999953
No 256
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=30.35 E-value=1.2e+02 Score=33.09 Aligned_cols=26 Identities=12% Similarity=0.278 Sum_probs=19.4
Q ss_pred eeEEEcCCCCceEEEEec---------CceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQ---------EGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq---------~G~V~~~~~ 177 (630)
..++++|||. +|.++.. .+.||++++
T Consensus 63 ~~~~~SpDg~-~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 63 SNYGLSPDRQ-FVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp SEEEECTTSS-EEEEEEEEEECSSSCEEEEEEEEET
T ss_pred eeEEECCCCC-eEEEEecCceeEEeecceEEEEEEC
Confidence 6789999995 5555543 589999875
No 257
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=29.97 E-value=4.8e+02 Score=30.27 Aligned_cols=25 Identities=8% Similarity=0.170 Sum_probs=15.9
Q ss_pred ccceEEEcCCCcEEEEe-CCeEEEEe
Q 006811 551 YIYSFGEDNRKDIFILT-SDGVYRVV 575 (630)
Q Consensus 551 ri~sf~ed~dGeLYvlt-s~gIyRiv 575 (630)
.+.+|...+||..++.. .++|..+-
T Consensus 609 ~v~~~~~S~DG~~l~~~~~~~i~~~d 634 (1045)
T 1k32_A 609 NLTDLRLSADRKTVMVRKDDGKIYTF 634 (1045)
T ss_dssp EEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred CcceEEECCCCCEEEEEcCCcEEEEe
Confidence 46688999999754444 45544433
No 258
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=29.00 E-value=1.4e+02 Score=29.60 Aligned_cols=56 Identities=23% Similarity=0.397 Sum_probs=34.5
Q ss_pred CCCceEEEEe-cCceEEEEEccCCCCCceeeecCCCCCcCCc---ccee---eCCCCceeeeeeCCCCCCCCEEEEE
Q 006811 158 DGSNRAFFSN-QEGKIWLATIPEQGLGETMELDASSPFADLT---DEVH---FDTEFGLMGMAFHPNFAKNGRFFAS 227 (630)
Q Consensus 158 DGs~RlfV~e-q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~---~~V~---~~~e~GLLGiAfhPdF~~Ng~~Yvs 227 (630)
|| ++|+.. +...|.+++ |..| +.+. .+|++ +... ...+.-|-|||+||+ .++|||.
T Consensus 159 ~G--~lyanvw~s~~I~vID-p~tG--~V~~------~idl~~l~~~~~~~~~~~~~vlNGIA~d~~---~~~lfVT 221 (243)
T 3mbr_X 159 NG--ELLANVWLTSRIARID-PASG--KVVA------WIDLQALVPDADALTDSTNDVLNGIAFDAE---HDRLFVT 221 (243)
T ss_dssp TT--EEEEEETTTTEEEEEC-TTTC--BEEE------EEECGGGSTTTTSCCCTTSSCEEEEEEETT---TTEEEEE
T ss_pred CC--EEEEEECCCCeEEEEE-CCCC--CEEE------EEECCcCccccccccCCcCCceEEEEEcCC---CCEEEEE
Confidence 66 899888 577888876 5443 3332 12222 1111 123457899999984 6789985
No 259
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=26.35 E-value=5.1e+02 Score=26.02 Aligned_cols=26 Identities=8% Similarity=0.166 Sum_probs=22.0
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
..+++.|||. .++++..+|.|+++++
T Consensus 314 ~~~~~~~~~~-~l~sg~~dg~i~vwd~ 339 (464)
T 3v7d_B 314 YSTIYDHERK-RCISASMDTTIRIWDL 339 (464)
T ss_dssp EEEEEETTTT-EEEEEETTSCEEEEET
T ss_pred EEEEEcCCCC-EEEEEeCCCcEEEEEC
Confidence 6789999985 6788888999999975
No 260
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=24.43 E-value=2e+02 Score=30.16 Aligned_cols=26 Identities=19% Similarity=0.445 Sum_probs=19.1
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEc
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~ 177 (630)
-+|+..+. +++|||+|++-.||.++.
T Consensus 183 EgcvvDd~-~g~Lyv~eEd~GIw~~da 208 (355)
T 3amr_A 183 EGMAADDE-YGRLYIAEEDEAIWKFSA 208 (355)
T ss_dssp EEEEEETT-TTEEEEEETTTEEEEEEC
T ss_pred ceEEEcCC-CCeEEEecccceEEEEeC
Confidence 45666654 459999999755999874
No 261
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=23.31 E-value=70 Score=35.75 Aligned_cols=131 Identities=14% Similarity=0.171 Sum_probs=0.0
Q ss_pred cEEEEEeeCce----eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeC
Q 006811 140 LCLEKIGNGSY----LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFH 215 (630)
Q Consensus 140 ~~le~va~Gl~----~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfh 215 (630)
|.+|.+.+|-. ..+++.||| ++++.+ +|.|++++ .+.|....+ +..........-.-+++|+
T Consensus 5 ~tl~~~~~~~~~~~~~~~~w~~dg--~~~~~~-~~~i~~~~-~~~~~~~~~----------~~~~~~~~~~~~~~~~~~S 70 (740)
T 4a5s_A 5 YTLTDYLKNTYRLKLYSLRWISDH--EYLYKQ-ENNILVFN-AEYGNSSVF----------LENSTFDEFGHSINDYSIS 70 (740)
T ss_dssp CCHHHHHHTCSCCCCCCEEECSSS--EEEEEE-TTEEEEEE-TTTCCEEEE----------ECTTTTTTCCSCCCEEEEC
T ss_pred eeHHHHhcCcccccccccEECCCC--cEEEEc-CCcEEEEE-CCCCceEEE----------EechhhhhhcccccceEEC
Q ss_pred CCCCCCCEEEEEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEE
Q 006811 216 PNFAKNGRFFASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRR 295 (630)
Q Consensus 216 PdF~~Ng~~YvsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~ 295 (630)
| +|+.-++-+.+...+. ..+...+..|.+... +.+.
T Consensus 71 p----dg~~l~~~~~~~~~~r---------------------------~~~~~~~~~~d~~~~-------------~~~~ 106 (740)
T 4a5s_A 71 P----DGQFILLEYNYVKQWR---------------------------HSYTASYDIYDLNKR-------------QLIT 106 (740)
T ss_dssp T----TSSEEEEEEEEEECSS---------------------------SCEEEEEEEEETTTT-------------EECC
T ss_pred C----CCCEEEEEECCeeeEE---------------------------EccceEEEEEECCCC-------------cEEE
Q ss_pred EEE----eccCCCCccceeeEEcCCCCeEEEEeCCCCC
Q 006811 296 IFT----MGLSFNGHHGGQLLFGPTDGYMYFMMGDGGG 329 (630)
Q Consensus 296 Il~----~~~P~~~H~GG~L~FGp~DG~LYv~~GDgg~ 329 (630)
|.. +..|.-...|.+|+|.- |+.||+.--+++.
T Consensus 107 l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~ 143 (740)
T 4a5s_A 107 EERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLP 143 (740)
T ss_dssp SSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSC
T ss_pred cccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCc
No 262
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=23.16 E-value=4.1e+02 Score=24.64 Aligned_cols=58 Identities=10% Similarity=0.147 Sum_probs=35.6
Q ss_pred eeEEEcCCCCceEEEEe--cCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEEEEE
Q 006811 151 LNMVAHPDGSNRAFFSN--QEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFFASF 228 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~e--q~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~YvsY 228 (630)
..+.+.|++. .++++. .+|.|+++++.. ++.+. ...+-+....+|+|+|+ |.+.++-
T Consensus 244 ~~~~~~~~~~-~~~~~sg~~d~~i~iwd~~~---~~~~~-------------~l~gH~~~V~~l~~spd----g~~l~S~ 302 (318)
T 4ggc_A 244 CSILWSPHYK-ELISGHGFAQNQLVIWKYPT---MAKVA-------------ELKGHTSRVLSLTMSPD----GATVASA 302 (318)
T ss_dssp EEEEEETTTT-EEEEEECTTTCCEEEEETTT---CCEEE-------------EECCCSSCEEEEEECTT----SSCEEEE
T ss_pred eeeeeccccc-ceEEEEEcCCCEEEEEECCC---CcEEE-------------EEcCCCCCEEEEEEcCC----CCEEEEE
Confidence 6678889885 455544 689999997532 22221 11122456889999984 5555544
Q ss_pred e
Q 006811 229 N 229 (630)
Q Consensus 229 s 229 (630)
+
T Consensus 303 s 303 (318)
T 4ggc_A 303 A 303 (318)
T ss_dssp E
T ss_pred e
Confidence 3
No 263
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=22.84 E-value=1.6e+02 Score=30.09 Aligned_cols=54 Identities=9% Similarity=0.116 Sum_probs=32.6
Q ss_pred eeEEEcCCCCceEEEEecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCC
Q 006811 151 LNMVAHPDGSNRAFFSNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPN 217 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPd 217 (630)
..++++|++.+.+..+..+|.|+++++.. +.. ...++. ...-......++|+|+
T Consensus 254 ~~v~~~p~~~~~~~s~s~d~~v~iwd~~~-~~~-------~~~~~~-----~~~h~~~v~~~~~spd 307 (435)
T 4e54_B 254 THVALNPCCDWFLATASVDQTVKIWDLRQ-VRG-------KASFLY-----SLPHRHPVNAACFSPD 307 (435)
T ss_dssp EEEEECTTCSSEEEEEETTSBCCEEETTT-CCS-------SSCCSB-----CCBCSSCEEECCBCTT
T ss_pred EeeeecCCCceEEEEecCcceeeEEeccc-ccc-------cceEEE-----eeeccccccceeECCC
Confidence 57899999964444566789999887532 211 111111 1123456789999984
No 264
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=21.36 E-value=7.7e+02 Score=26.36 Aligned_cols=113 Identities=13% Similarity=0.069 Sum_probs=0.0
Q ss_pred eeEEEcCC----CCceEEE-EecCceEEEEEccCCCCCceeeecCCCCCcCCccceeeCCCCceeeeeeCCCCCCCCEEE
Q 006811 151 LNMVAHPD----GSNRAFF-SNQEGKIWLATIPEQGLGETMELDASSPFADLTDEVHFDTEFGLMGMAFHPNFAKNGRFF 225 (630)
Q Consensus 151 ~~ma~~pD----Gs~RlfV-~eq~G~V~~~~~p~~gsg~~l~~~~~~pflDi~~~V~~~~e~GLLGiAfhPdF~~Ng~~Y 225 (630)
+.++|+|+ +..++++ +..+|.|+++++..........+....|...+ ...+.....++|+|+ +.|.
T Consensus 211 ~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l-----~~h~~~v~sv~~s~~----~~la 281 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTL-----SLADSLITTFDFLSP----TTVV 281 (524)
T ss_dssp EEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEE-----CCTTTCEEEEEESSS----SEEE
T ss_pred EEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEE-----EcCCCCEEEEEecCC----CeEE
Q ss_pred EEEeecCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCcceeEEEEEEecCCCCCcchhccCCCCCcEEEEEeccCCCC
Q 006811 226 ASFNCDKVKWPGCAGRCSCNSDVNCDPSKLRGDNGAQPCQYQTVVAEYTVNGTASEPSLAKRAKPSEVRRIFTMGLSFNG 305 (630)
Q Consensus 226 vsYs~~~~~~~~~~g~~~~ns~~~~~p~~~~~dnG~~~~~~~~~I~r~~~~~~~~~~~~~~~~~~~~~~~Il~~~~P~~~ 305 (630)
...... .|.-|.+... ......+. .
T Consensus 282 sgs~Dg-------------------------------------tV~lWD~~~~------------~~~~~~~~------~ 306 (524)
T 2j04_B 282 CGFKNG-------------------------------------FVAEFDLTDP------------EVPSFYDQ------V 306 (524)
T ss_dssp EEETTS-------------------------------------EEEEEETTBC------------SSCSEEEE------C
T ss_pred EEeCCC-------------------------------------EEEEEECCCC------------CCceEEee------c
Q ss_pred ccce--ee--EEcCCCC-eEEEEeCCCC
Q 006811 306 HHGG--QL--LFGPTDG-YMYFMMGDGG 328 (630)
Q Consensus 306 H~GG--~L--~FGp~DG-~LYv~~GDgg 328 (630)
|.+. .| .|.| || .+.++.+.-+
T Consensus 307 H~~~V~sv~~~~s~-~g~~~laS~S~D~ 333 (524)
T 2j04_B 307 HDSYILSVSTAYSD-FEDTVVSTVAVDG 333 (524)
T ss_dssp SSSCEEEEEEECCT-TSCCEEEEEETTS
T ss_pred ccccEEEEEEEcCC-CCCeEEEEeccCC
No 265
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=20.08 E-value=5.7e+02 Score=24.33 Aligned_cols=26 Identities=31% Similarity=0.588 Sum_probs=17.2
Q ss_pred eeEEEcCCCCceEEE-EecC--c--eEEEEEc
Q 006811 151 LNMVAHPDGSNRAFF-SNQE--G--KIWLATI 177 (630)
Q Consensus 151 ~~ma~~pDGs~RlfV-~eq~--G--~V~~~~~ 177 (630)
..++++|||. +|++ .++. | .||++++
T Consensus 62 ~~~~~SpDg~-~la~~~~~~~~~~~~l~~~~~ 92 (347)
T 2gop_A 62 TMPRISPDGK-KIAFMRANEEKKVSEIWVADL 92 (347)
T ss_dssp EEEEECTTSS-EEEEEEEETTTTEEEEEEEET
T ss_pred CCeEECCCCC-EEEEEEeccCCCcceEEEEEC
Confidence 5689999996 4544 4433 3 4888764
Done!