BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006812
(630 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3CEQ|A Chain A, The Tpr Domain Of Human Kinesin Light Chain 2 (Hklc2)
pdb|3CEQ|B Chain B, The Tpr Domain Of Human Kinesin Light Chain 2 (Hklc2)
Length = 283
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 466 GKVPQ--AIPYLESAAERLKESFGPKHFGVGYIYNNLGAAYLELDRPQSAAQVFAFAKDI 523
G VP+ A+P + A E L+++ G H V + N L Y + ++ + AA + A I
Sbjct: 13 GLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAI 72
Query: 524 MDVSLGPHHADSIEACQNLSKAYSSMGSYTLAIEFQQRAIDAWE 567
+ +LG H NL+ Y G Y A +RA++ E
Sbjct: 73 REKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIRE 116
>pdb|3EDT|B Chain B, Crystal Structure Of The Mutated S328n Hklc2 Tpr Domain
pdb|3EDT|D Chain D, Crystal Structure Of The Mutated S328n Hklc2 Tpr Domain
pdb|3EDT|F Chain F, Crystal Structure Of The Mutated S328n Hklc2 Tpr Domain
pdb|3EDT|H Chain H, Crystal Structure Of The Mutated S328n Hklc2 Tpr Domain
Length = 283
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 466 GKVPQ--AIPYLESAAERLKESFGPKHFGVGYIYNNLGAAYLELDRPQSAAQVFAFAKDI 523
G VP+ A+P + A E L+++ G H V + N L Y + ++ + AA + A I
Sbjct: 13 GLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAI 72
Query: 524 MDVSLGPHHADSIEACQNLSKAYSSMGSYTLAIEFQQRAIDAWE 567
+ +LG H NL+ Y G Y A +RA++ E
Sbjct: 73 REKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIRE 116
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 46/117 (39%), Gaps = 7/117 (5%)
Query: 453 SVSARIGWLLLL---TGKVPQAIPYLESAAERLKESFGPKHFGVGYIYNNLGAAYLELDR 509
+V+A + L +L GK +A P + A E ++ G H V NNL +
Sbjct: 83 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGK 142
Query: 510 PQSAAQVFAFAKDIMDVSLGPHHADSIEACQNLSKAYSSMGSY----TLAIEFQQRA 562
+ + A +I LGP + + NL+ Y G Y TL E RA
Sbjct: 143 AEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRA 199
>pdb|3NF1|A Chain A, Crystal Structure Of The Tpr Domain Of Kinesin Light Chain
1
Length = 311
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%)
Query: 466 GKVPQAIPYLESAAERLKESFGPKHFGVGYIYNNLGAAYLELDRPQSAAQVFAFAKDIMD 525
G+ A+P + A E L+++ G H V + N L Y + ++ + AA + A I +
Sbjct: 41 GRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIRE 100
Query: 526 VSLGPHHADSIEACQNLSKAYSSMGSYTLAIEFQQRAIDAWE 567
+LG H NL+ Y G Y A +RA++ E
Sbjct: 101 KTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIRE 142
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 62/160 (38%), Gaps = 6/160 (3%)
Query: 417 ISMQYESMNEFETAISXXXXXXXXXXXXPQAQHSEGSVSARIGWLLLL---TGKVPQAIP 473
+ +QY S +E A+ + H V+ + L L+ K A
Sbjct: 33 LVIQYASQGRYEVAVPLCKQALEDLEKT--SGHDHPDVATMLNILALVYRDQNKYKDAAN 90
Query: 474 YLESAAERLKESFGPKHFGVGYIYNNLGAAYLELDRPQSAAQVFAFAKDIMDVSLGPHHA 533
L A +++ G H V NNL Y + + + A + A +I + LG H
Sbjct: 91 LLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHP 150
Query: 534 DSIEACQNLSKAYSSMGSYTLAIEFQQRAIDAWESH-GPS 572
D + NL+ + G Y + QRA++ +++ GP
Sbjct: 151 DVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPD 190
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 85/228 (37%), Gaps = 25/228 (10%)
Query: 345 GKFEEAINTLKGVVRQTEKESETRALVFISMGKALC----NQEKFADAKRCLEIACGILD 400
G++E A+ K + EK S +M L +Q K+ DA L A I +
Sbjct: 41 GRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIRE 100
Query: 401 KKETISPEEVADAYSEISMQYESMNEFETAISXXXXXXXXXXXXPQAQHSEGSVSARIGW 460
K VA + +++ Y +++ A H + V+ ++
Sbjct: 101 KTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPD--VAKQLNN 158
Query: 461 LLLLT---GKVPQAIPYLESAAERLKESFGPKHFGVGYIYNNLGAAYLELDRPQSAAQVF 517
L LL GK + Y + A E + GP V NNL + YL+ + + A ++
Sbjct: 159 LALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLY 218
Query: 518 AFAKDIM-----------DVSLGP--HHADSIEACQNLSKAYSSMGSY 552
K+I+ D P HA+ E C+ K +S G Y
Sbjct: 219 ---KEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEY 263
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 61/161 (37%), Gaps = 9/161 (5%)
Query: 409 EVADAYSEISMQYESMNEFETAISXXXXXXXXXXXXPQAQHSEGSVSARIGWLLLL---T 465
+VA + +++ Y N+++ A + H +V+A + L +L
Sbjct: 67 DVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHP--AVAATLNNLAVLYGKR 124
Query: 466 GKVPQAIPYLESAAERLKESFGPKHFGVGYIYNNLGAAYLELDRPQSAAQVFAFAKDIMD 525
GK +A P + A E ++ G H V NNL + + + A +I
Sbjct: 125 GKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQ 184
Query: 526 VSLGPHHADSIEACQNLSKAYSSMGSY----TLAIEFQQRA 562
LGP + + NL+ Y G + TL E RA
Sbjct: 185 TKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRA 225
>pdb|3SF4|A Chain A, Crystal Structure Of The Complex Between The Conserved
Cell Polarity Proteins Inscuteable And Lgn
pdb|3SF4|B Chain B, Crystal Structure Of The Complex Between The Conserved
Cell Polarity Proteins Inscuteable And Lgn
pdb|3SF4|C Chain C, Crystal Structure Of The Complex Between The Conserved
Cell Polarity Proteins Inscuteable And Lgn
Length = 406
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 107/277 (38%), Gaps = 53/277 (19%)
Query: 297 LGVIYSGLEEHQKALEQNELSQKVLKTWGLSSELLRAEIDAANMQIALGKFEEAINTLK- 355
LG Y L ++ KALE + + +T G +A + N LG F+EAI +
Sbjct: 53 LGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQR 112
Query: 356 --GVVRQ-TEKESETRAL-----VFISMGKALCNQEKFADAKRCLEIAC-GILDKKETIS 406
+ R+ +K E RAL V+ + GK+ C G D E
Sbjct: 113 HLDISRELNDKVGEARALYNLGNVYHAKGKSF---------------GCPGPQDVGEF-- 155
Query: 407 PEEVADAYSEISMQYESMNEFETAISXXXXXXXXXXXXPQAQHSEGSVSARIGWLLLLTG 466
PEEV DA YE TA+ + ++G +G L G
Sbjct: 156 PEEVRDALQAAVDFYEENLSLVTALGD--------------RAAQGRAFGNLGNTHYLLG 201
Query: 467 KVPQAIPYLESAAERLKESFGPKHFGVGYIYNNLGAAYLELDRPQSAAQVFA----FAKD 522
A+ E KE FG K Y+NLG AY+ L ++A++ + A+
Sbjct: 202 NFRDAVIAHEQRLLIAKE-FGDKA-AERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQ 259
Query: 523 IMDVSLGPHHADSIEACQNLSKAYSSMGSYTLAIEFQ 559
+ D ++ ++C +L Y+ + Y AI++
Sbjct: 260 LKDRAV------EAQSCYSLGNTYTLLQDYEKAIDYH 290
>pdb|2WQH|A Chain A, Crystal Structure Of Ctpr3y3
Length = 125
Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 16/110 (14%)
Query: 466 GKVPQAIPYLESAAERLKESFGPKHFGVGYIYNNLGAAYLELDRPQSAAQVFAFAKDIMD 525
G +AI Y + A E P + Y NLG AY + A + + A
Sbjct: 23 GDYDEAIEYYQKALE-----LYPNNAEAWY---NLGNAYYKQGDYDEAIEYYQKA----- 69
Query: 526 VSLGPHHADSIEACQNLSKAYSSMGSYTLAIEFQQRAIDAWESHGPSAQD 575
+ L P++A EA NL AY G Y AIE+ Q+A++ + ++ + Q+
Sbjct: 70 LELYPNNA---EAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAKQN 116
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 533 ADSIEACQNLSKAYSSMGSYTLAIEFQQRAIDAWESHG 570
+S EA NL AY G Y AIE+ Q+A++ + ++
Sbjct: 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNA 43
>pdb|2FO7|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
(Trigonal Crystal Form)
pdb|2HYZ|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
(Orthorombic Crystal Form)
Length = 136
Score = 33.9 bits (76), Expect = 0.28, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 23/154 (14%)
Query: 411 ADAYSEISMQYESMNEFETAISXXXXXXXXXXXXPQAQHSEGSVSARIGWLLLLTGKVPQ 470
A+A+ + Y +++ AI +A ++ G+ + G +
Sbjct: 1 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-------QGDYDE 53
Query: 471 AIPYLESAAERLKESFGPKHFGVGYIYNNLGAAYLELDRPQSAAQVFAFAKDIMDVSLGP 530
AI Y + A E P+ Y NLG AY + A + + A + L P
Sbjct: 54 AIEYYQKALE-----LDPRSAEAWY---NLGNAYYKQGDYDEAIEYYQKA-----LELDP 100
Query: 531 HHADSIEACQNLSKAYSSMGSYTLAIEFQQRAID 564
A EA NL AY G Y AIE+ Q+A++
Sbjct: 101 RSA---EAWYNLGNAYYKQGDYDEAIEYYQKALE 131
>pdb|3A0F|A Chain A, The Crystal Structure Of Geotrichum Sp. M128 Xyloglucanase
Length = 763
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 133 LSFANRALNVLDKDERNNRPSLLVAMCLQ 161
L FA RA NVL + RN+ P VA C Q
Sbjct: 492 LDFAGRAANVLARVGRNDHPDAGVAGCTQ 520
>pdb|1NA0|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
pdb|1NA0|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
Length = 125
Score = 33.1 bits (74), Expect = 0.52, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Query: 466 GKVPQAIPYLESAAERLKESFGPKHFGVGYIYNNLGAAYLELDRPQSAAQVFAFAKDIMD 525
G +AI Y + A E P + Y NLG AY + A + + A
Sbjct: 23 GDYDEAIEYYQKALE-----LDPNNAEAWY---NLGNAYYKQGDYDEAIEYYQKA----- 69
Query: 526 VSLGPHHADSIEACQNLSKAYSSMGSYTLAIEFQQRAIDAWESHGPSAQD 575
+ L P++A EA NL AY G Y AIE+ Q+A++ ++ + Q+
Sbjct: 70 LELDPNNA---EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQN 116
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 533 ADSIEACQNLSKAYSSMGSYTLAIEFQQRAID 564
+S EA NL AY G Y AIE+ Q+A++
Sbjct: 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 37
>pdb|3KD7|A Chain A, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
pdb|3KD7|B Chain B, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
pdb|3KD7|C Chain C, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
pdb|3KD7|D Chain D, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
pdb|3KD7|E Chain E, Designed Tpr Module (Ctpr390) In Complex With Its
Peptide-Ligand (Hsp90 Peptide)
Length = 125
Score = 32.3 bits (72), Expect = 0.75, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 497 YNNLGAAYLELDRPQSAAQVFAFAKDIMDVSLGPHHADSIEACQNLSKAYSSMGSYTLAI 556
+ NLG AY + Q A + + A + L P++A A NL AY G Y AI
Sbjct: 12 WKNLGNAYYKQGDYQKAIEYYQKA-----LELDPNNA---SAWYNLGNAYYKQGDYQKAI 63
Query: 557 EFQQRAID 564
E+ Q+A++
Sbjct: 64 EYYQKALE 71
Score = 30.8 bits (68), Expect = 2.1, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 533 ADSIEACQNLSKAYSSMGSYTLAIEFQQRAID 564
+S EA +NL AY G Y AIE+ Q+A++
Sbjct: 6 GNSAEAWKNLGNAYYKQGDYQKAIEYYQKALE 37
>pdb|3CV0|A Chain A, Structure Of Peroxisomal Targeting Signal 1 (Pts1) Binding
Domain Of Trypanosoma Brucei Peroxin 5 (Tbpex5)complexed
To T. Brucei Phosphoglucoisomerase (Pgi) Pts1 Peptide
pdb|3CVL|A Chain A, Structure Of Peroxisomal Targeting Signal 1 (Pts1) Binding
Domain Of Trypanosoma Brucei Peroxin 5 (Tbpex5)complexed
To T. Brucei Phosphofructokinase (Pfk) Pts1 Peptide
pdb|3CVN|A Chain A, Structure Of Peroxisomal Targeting Signal 1 (Pts1) Binding
Domain Of Trypanosoma Brucei Peroxin 5 (Tbpex5)complexed
To T. Brucei Glyceraldehyde-3-Phosphate Dehydrogenase
(Gapdh) Pts1 Peptide
pdb|3CVP|A Chain A, Structure Of Peroxisomal Targeting Signal 1 (Pts1) Binding
Domain Of Trypanosoma Brucei Peroxin 5 (Tbpex5)complexed
To Pts1 Peptide (10-Skl)
Length = 327
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 496 IYNNLGAAYLELDRPQSAAQVFAFAKDIMDVSLGPHHADSIEACQNLSKAYSSMGSYTLA 555
++N LGA +RPQ A + A DI P + + N++ +YS+M Y LA
Sbjct: 208 LWNKLGATLANGNRPQEALDAYNRALDI-----NPGY---VRVMYNMAVSYSNMSQYDLA 259
Query: 556 IEFQQRAI 563
+ RAI
Sbjct: 260 AKQLVRAI 267
>pdb|3CVQ|A Chain A, Structure Of Peroxisomal Targeting Signal 1 (pts1) Binding
Domain Of Trypanosoma Brucei Peroxin 5 (tbpex5)complexed
To Pts1 Peptide (7- Skl)
Length = 327
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 496 IYNNLGAAYLELDRPQSAAQVFAFAKDIMDVSLGPHHADSIEACQNLSKAYSSMGSYTLA 555
++N LGA +RPQ A + A DI P + + N++ +YS+M Y LA
Sbjct: 208 LWNKLGATLANGNRPQEALDAYNRALDI-----NPGY---VRVMYNMAVSYSNMSQYDLA 259
Query: 556 IEFQQRAI 563
+ RAI
Sbjct: 260 AKQLVRAI 267
>pdb|4G2V|A Chain A, Structure Complex Of Lgn Binding With Frmpd1
Length = 340
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 106/277 (38%), Gaps = 53/277 (19%)
Query: 297 LGVIYSGLEEHQKALEQNELSQKVLKTWGLSSELLRAEIDAANMQIALGKFEEAINTLK- 355
LG Y L ++ KALE + + +T G +A + N LG F+EAI +
Sbjct: 51 LGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQR 110
Query: 356 --GVVRQ-TEKESETRAL-----VFISMGKALCNQEKFADAKRCLEIAC-GILDKKETIS 406
+ R+ +K E RAL V+ + GK+ C G D E
Sbjct: 111 HLDISRELNDKVGEARALYNLGNVYHAKGKSF---------------GCPGPQDTGEF-- 153
Query: 407 PEEVADAYSEISMQYESMNEFETAISXXXXXXXXXXXXPQAQHSEGSVSARIGWLLLLTG 466
PE+V +A YE TA+ ++G +G L G
Sbjct: 154 PEDVRNALQAAVDLYEENLSLVTALGDRA--------------AQGRAFGNLGNTHYLLG 199
Query: 467 KVPQAIPYLESAAERLKESFGPKHFGVGYIYNNLGAAYLELDRPQSAAQVFA----FAKD 522
A+ E KE FG K Y+NLG AY+ L ++A++ + A+
Sbjct: 200 NFRDAVIAHEQRLLIAKE-FGDK-AAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQ 257
Query: 523 IMDVSLGPHHADSIEACQNLSKAYSSMGSYTLAIEFQ 559
+ D ++ ++C +L Y+ + Y AI++
Sbjct: 258 LKDRAV------EAQSCYSLGNTYTLLQDYEKAIDYH 288
>pdb|3RO2|A Chain A, Structures Of The LgnNUMA COMPLEX
Length = 338
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 106/277 (38%), Gaps = 53/277 (19%)
Query: 297 LGVIYSGLEEHQKALEQNELSQKVLKTWGLSSELLRAEIDAANMQIALGKFEEAINTLK- 355
LG Y L ++ KALE + + +T G +A + N LG F+EAI +
Sbjct: 49 LGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQR 108
Query: 356 --GVVRQ-TEKESETRAL-----VFISMGKALCNQEKFADAKRCLEIAC-GILDKKETIS 406
+ R+ +K E RAL V+ + GK+ C G D E
Sbjct: 109 HLDISRELNDKVGEARALYNLGNVYHAKGKSF---------------GCPGPQDTGEF-- 151
Query: 407 PEEVADAYSEISMQYESMNEFETAISXXXXXXXXXXXXPQAQHSEGSVSARIGWLLLLTG 466
PE+V +A YE TA+ ++G +G L G
Sbjct: 152 PEDVRNALQAAVDLYEENLSLVTALGDRA--------------AQGRAFGNLGNTHYLLG 197
Query: 467 KVPQAIPYLESAAERLKESFGPKHFGVGYIYNNLGAAYLELDRPQSAAQVFA----FAKD 522
A+ E KE FG K Y+NLG AY+ L ++A++ + A+
Sbjct: 198 NFRDAVIAHEQRLLIAKE-FGDK-AAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQ 255
Query: 523 IMDVSLGPHHADSIEACQNLSKAYSSMGSYTLAIEFQ 559
+ D ++ ++C +L Y+ + Y AI++
Sbjct: 256 LKDRAV------EAQSCYSLGNTYTLLQDYEKAIDYH 286
>pdb|1W3B|A Chain A, The Superhelical Tpr Domain Of O-Linked Glcnac Transferase
Reveals Structural Similarities To Importin Alpha.
pdb|1W3B|B Chain B, The Superhelical Tpr Domain Of O-Linked Glcnac Transferase
Reveals Structural Similarities To Importin Alpha
Length = 388
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 47/113 (41%), Gaps = 12/113 (10%)
Query: 499 NLGAAYLELDRPQSAAQVF--AFAKDIMDVSLGPHHADSIEACQNLSKAYSSMGSYTLAI 556
N AY+ L A++F A A + +SL P+HA NL+ Y G LAI
Sbjct: 201 NFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHA---VVHGNLACVYYEQGLIDLAI 257
Query: 557 EFQQRAIDAWESHGPSAQDXXXXXXXXXXQLKIKASGASINQLPTKALPLPPT 609
+ +RAI+ + H P A LK K S A AL L PT
Sbjct: 258 DTYRRAIE-LQPHFPDA------YCNLANALKEKGSVAEAEDCYNTALRLCPT 303
>pdb|1NA3|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
pdb|1NA3|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
Length = 91
Score = 31.2 bits (69), Expect = 1.6, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 497 YNNLGAAYLELDRPQSAAQVFAFAKDIMDVSLGPHHADSIEACQNLSKAYSSMGSYTLAI 556
+ NLG AY + A + + A + L P++A EA NL AY G Y AI
Sbjct: 12 WYNLGNAYYKQGDYDEAIEYYQKA-----LELDPNNA---EAWYNLGNAYYKQGDYDEAI 63
Query: 557 EFQQRAIDAWESHGPSAQD 575
E+ Q+A++ ++ + Q+
Sbjct: 64 EYYQKALELDPNNAEAKQN 82
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 533 ADSIEACQNLSKAYSSMGSYTLAIEFQQRAID 564
+S EA NL AY G Y AIE+ Q+A++
Sbjct: 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 37
>pdb|2AVP|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
Length = 70
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 492 GVGYIYNNLGAAYLELDRPQSAAQVFAFAKDIMDVSLGPHHADSIEACQNLSKAYSSMGS 551
G + NLG AY + A + + A + L P A EA NL AY G
Sbjct: 1 GSAEAWYNLGNAYYKQGDYDEAIEYYQKA-----LELDPRSA---EAWYNLGNAYYKQGD 52
Query: 552 YTLAIEFQQRAID 564
Y AIE+ Q+A++
Sbjct: 53 YDEAIEYYQKALE 65
>pdb|1Z7X|W Chain W, X-Ray Structure Of Human Ribonuclease Inhibitor Complexed
With Ribonuclease I
pdb|1Z7X|Y Chain Y, X-Ray Structure Of Human Ribonuclease Inhibitor Complexed
With Ribonuclease I
pdb|2Q4G|W Chain W, Ensemble Refinement Of The Protein Crystal Structure Of
Human Ribonuclease Inhibitor Complexed With Ribonuclease
I
pdb|2Q4G|Y Chain Y, Ensemble Refinement Of The Protein Crystal Structure Of
Human Ribonuclease Inhibitor Complexed With Ribonuclease
I
Length = 461
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 244 DSRELGVANRDLAEAFVAVL--NFKEALPFGLKALEIHKKGLGHNSVEVAHDRRLLGVIY 301
D +EL V+N D+ EA V VL K++ P L+AL++ G+ ++ R L G++
Sbjct: 171 DFKELTVSNNDINEAGVRVLCQGLKDS-PCQLEALKLESCGVTSDNC-----RDLCGIVA 224
Query: 302 SGLEEHQKALEQNEL 316
S + AL N+L
Sbjct: 225 SKASLRELALGSNKL 239
>pdb|1A4Y|A Chain A, Ribonuclease Inhibitor-Angiogenin Complex
pdb|1A4Y|D Chain D, Ribonuclease Inhibitor-Angiogenin Complex
pdb|2BEX|A Chain A, Crystal Structure Of Placental Ribonuclease Inhibitor In
Complex With Human Eosinophil Derived Neurotoxin At 2a
Resolution
pdb|2BEX|B Chain B, Crystal Structure Of Placental Ribonuclease Inhibitor In
Complex With Human Eosinophil Derived Neurotoxin At 2a
Resolution
Length = 460
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 244 DSRELGVANRDLAEAFVAVL--NFKEALPFGLKALEIHKKGLGHNSVEVAHDRRLLGVIY 301
D +EL V+N D+ EA V VL K++ P L+AL++ G+ ++ R L G++
Sbjct: 170 DFKELTVSNNDINEAGVRVLCQGLKDS-PCQLEALKLESCGVTSDNC-----RDLCGIVA 223
Query: 302 SGLEEHQKALEQNEL 316
S + AL N+L
Sbjct: 224 SKASLRELALGSNKL 238
>pdb|4A1S|A Chain A, Crystallographic Structure Of The Pins:insc Complex
pdb|4A1S|B Chain B, Crystallographic Structure Of The Pins:insc Complex
Length = 411
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 297 LGVIYSGLEEHQKALEQNELSQKVLKTWGLSSELLRAEIDAANMQIALGKFEEAI----N 352
LG Y L + Q A+E ++ ++ + +G + RA + N I LG+FE+A
Sbjct: 229 LGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKR 288
Query: 353 TLKGVVRQTEKESETRA 369
TL V E+E E ++
Sbjct: 289 TLALAVELGEREVEAQS 305
>pdb|2XY9|A Chain A, Human Angiotensin Converting Enzyme In Complex With
Phosphinic Tripeptide
Length = 585
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 27 NYIHDLTSSSSPL---KSCTKA-HGLEFRTHQPSHTINTLVGNPPQTSTRQRKIKEKSDL 82
NY ++T+ +S + K+ A H L++ T +N L Q +T +R IK+ DL
Sbjct: 29 NYNTNITTETSKILLQKNMQIANHTLKYGTQARKFDVNQL-----QNTTIKRIIKKVQDL 83
Query: 83 EEAFESAKTSEEMLQIFKQMESSF 106
E A A+ EE +I ME+++
Sbjct: 84 ERAALPAQELEEYNKILLDMETTY 107
>pdb|1O8A|A Chain A, Crystal Structure Of Human Angiotensin Converting Enzyme
(Native).
pdb|1UZF|A Chain A, Complex Of The Anti-Hypertensive Drug Captopril An The
Human Testicular Angiotensin I-Converting Enzyme
pdb|4APH|A Chain A, Human Angiotensin-Converting Enzyme In Complex With
Angiotensin-Ii
pdb|4APJ|A Chain A, Human Angiotensin-Converting Enzyme In Complex With Bppb
pdb|1O86|A Chain A, Crystal Structure Of Human Angiotensin Converting Enzyme
In Complex With Lisinopril.
pdb|1UZE|A Chain A, Complex Of The Anti-hypertensive Drug Enalaprilat And The
Human Testicular Angiotensin I-converting Enzyme
Length = 589
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 27 NYIHDLTSSSSPL---KSCTKA-HGLEFRTHQPSHTINTLVGNPPQTSTRQRKIKEKSDL 82
NY ++T+ +S + K+ A H L++ T +N L Q +T +R IK+ DL
Sbjct: 32 NYNTNITTETSKILLQKNMQIANHTLKYGTQARKFDVNQL-----QNTTIKRIIKKVQDL 86
Query: 83 EEAFESAKTSEEMLQIFKQMESSF 106
E A A+ EE +I ME+++
Sbjct: 87 ERAALPAQELEEYNKILLDMETTY 110
>pdb|2YDM|A Chain A, Structural Characterization Of Angiotensin-I Converting
Enzyme In Complex With A Selenium Analogue Of Captopril
Length = 589
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 27 NYIHDLTSSSSPL---KSCTKA-HGLEFRTHQPSHTINTLVGNPPQTSTRQRKIKEKSDL 82
NY ++T+ +S + K+ A H L++ T +N L Q +T +R IK+ DL
Sbjct: 32 NYNTNITTETSKILLQKNMQIANHTLKYGTQARKFDVNQL-----QNTTIKRIIKKVQDL 86
Query: 83 EEAFESAKTSEEMLQIFKQMESSF 106
E A A+ EE +I ME+++
Sbjct: 87 ERAALPAQELEEYNKILLDMETTY 110
>pdb|3BKK|A Chain A, Tesis Ace Co-Crystal Structure With Ketone Ace Inhibitor
Kaf
pdb|3BKL|A Chain A, Testis Ace Co-Crystal Structure With Ketone Ace Inhibitor
Kaw
pdb|3L3N|A Chain A, Testis Ace Co-Crystal Structure With Novel Inhibitor Lisw
Length = 591
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 27 NYIHDLTSSSSPL---KSCTKA-HGLEFRTHQPSHTINTLVGNPPQTSTRQRKIKEKSDL 82
NY ++T+ +S + K+ A H L++ T +N L Q +T +R IK+ DL
Sbjct: 32 NYNTNITTETSKILLQKNMQIAQHTLKYGTQARKFDVNQL-----QNTTIKRIIKKVQDL 86
Query: 83 EEAFESAKTSEEMLQIFKQMESSF 106
E A A+ EE +I ME+++
Sbjct: 87 ERAALPAQELEEYNKILLDMETTY 110
>pdb|2OC2|A Chain A, Structure Of Testis Ace With Rxpa380
Length = 591
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 27 NYIHDLTSSSSPL---KSCTKA-HGLEFRTHQPSHTINTLVGNPPQTSTRQRKIKEKSDL 82
NY ++T+ +S + K+ A H L++ T +N L Q +T +R IK+ DL
Sbjct: 32 NYNTNITTETSKILLQKNMQIANHTLKYGTQARKFDVNQL-----QNTTIKRIIKKVQDL 86
Query: 83 EEAFESAKTSEEMLQIFKQMESSF 106
E A A+ EE +I ME+++
Sbjct: 87 ERAALPAQELEEYNKILLDMETTY 110
>pdb|2IUX|A Chain A, Human Tace Mutant G1234
Length = 591
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 27 NYIHDLTSSSSPL---KSCTKA-HGLEFRTHQPSHTINTLVGNPPQTSTRQRKIKEKSDL 82
NY ++T+ +S + K+ A H L++ T +N L Q +T +R IK+ DL
Sbjct: 32 NYNTNITTETSKILLQKNMQIANHTLKYGTQARKFDVNQL-----QNTTIKRIIKKVQDL 86
Query: 83 EEAFESAKTSEEMLQIFKQMESSF 106
E A A+ EE +I ME+++
Sbjct: 87 ERAALPAQELEEYNKILLDMETTY 110
>pdb|2IUL|A Chain A, Human Tace G13 Mutant
Length = 591
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 27 NYIHDLTSSSSPL---KSCTKA-HGLEFRTHQPSHTINTLVGNPPQTSTRQRKIKEKSDL 82
NY ++T+ +S + K+ A H L++ T +N L Q +T +R IK+ DL
Sbjct: 32 NYNTNITTETSKILLQKNMQIAQHTLKYGTQARKFDVNQL-----QNTTIKRIIKKVQDL 86
Query: 83 EEAFESAKTSEEMLQIFKQMESSF 106
E A A+ EE +I ME+++
Sbjct: 87 ERAALPAQELEEYNKILLDMETTY 110
>pdb|1RN7|A Chain A, Structure Of Human Cystatin D
pdb|1ROA|A Chain A, Structure Of Human Cystatin D
Length = 122
Score = 28.9 bits (63), Expect = 8.2, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 130 EMTLSFANRALN-VLDKDERNNRPSLLVAMCLQVMGSANYSF 170
+ L FA N V++KDE +RP ++A Q++G NY F
Sbjct: 25 QRALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVGGVNYYF 66
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.129 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,211,593
Number of Sequences: 62578
Number of extensions: 542506
Number of successful extensions: 1218
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1158
Number of HSP's gapped (non-prelim): 76
length of query: 630
length of database: 14,973,337
effective HSP length: 105
effective length of query: 525
effective length of database: 8,402,647
effective search space: 4411389675
effective search space used: 4411389675
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 54 (25.4 bits)