Query 006814
Match_columns 630
No_of_seqs 418 out of 2160
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 09:41:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006814.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006814hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fbk_A DNA repair and telomere 100.0 3.8E-81 1.3E-85 684.8 40.6 390 6-404 70-472 (472)
2 4fbw_A DNA repair protein RAD3 100.0 1.6E-81 5.4E-86 682.4 37.3 391 6-405 7-410 (417)
3 3t1i_A Double-strand break rep 100.0 2.3E-80 7.9E-85 675.8 38.3 393 5-406 25-424 (431)
4 1ii7_A MRE11 nuclease; RAD50, 100.0 1.3E-33 4.3E-38 297.8 28.9 294 13-386 1-320 (333)
5 3av0_A DNA double-strand break 100.0 7.1E-33 2.4E-37 298.3 34.2 279 7-371 15-301 (386)
6 2q8u_A Exonuclease, putative; 100.0 6.9E-31 2.4E-35 276.8 26.8 259 9-321 15-290 (336)
7 3tho_B Exonuclease, putative; 100.0 8.5E-31 2.9E-35 281.8 26.3 250 13-320 1-271 (379)
8 3d03_A Phosphohydrolase; glyce 99.8 2.6E-19 9E-24 180.2 14.3 242 13-316 1-264 (274)
9 3ib7_A ICC protein; metallopho 99.8 2.1E-18 7.3E-23 178.5 18.8 243 8-313 21-282 (330)
10 1uf3_A Hypothetical protein TT 99.8 5.6E-18 1.9E-22 165.6 15.4 202 11-309 4-227 (228)
11 2yvt_A Hypothetical protein AQ 99.7 2.3E-17 8E-22 165.4 14.3 44 11-66 4-47 (260)
12 2a22_A Vacuolar protein sortin 99.7 3.2E-16 1.1E-20 155.3 16.0 99 217-322 112-213 (215)
13 1z2w_A Vacuolar protein sortin 99.7 1.8E-16 6.1E-21 154.1 13.0 73 244-322 116-189 (192)
14 2xmo_A LMO2642 protein; phosph 99.7 2.8E-15 9.6E-20 162.8 19.6 249 8-310 35-333 (443)
15 2kkn_A Uncharacterized protein 99.6 2.8E-15 9.7E-20 144.8 12.5 52 244-309 127-178 (178)
16 1s3l_A Hypothetical protein MJ 99.6 7.2E-15 2.5E-19 143.3 12.4 162 12-304 25-187 (190)
17 2nxf_A Putative dimetal phosph 99.6 4.8E-14 1.7E-18 144.0 16.1 87 10-131 3-100 (322)
18 1ute_A Protein (II purple acid 99.5 3.9E-13 1.3E-17 137.0 18.8 257 10-323 4-301 (313)
19 1su1_A Hypothetical protein YF 99.5 9.6E-13 3.3E-17 129.8 17.7 176 10-317 23-202 (208)
20 3qfm_A SAPH, putative uncharac 99.5 8.6E-13 2.9E-17 135.4 16.5 215 1-310 1-230 (270)
21 3ck2_A Conserved uncharacteriz 99.4 7.3E-13 2.5E-17 126.6 12.4 89 219-316 78-168 (176)
22 1nnw_A Hypothetical protein; s 99.4 1.1E-12 3.6E-17 131.6 12.1 71 12-131 1-76 (252)
23 3rqz_A Metallophosphoesterase; 99.3 2.5E-12 8.5E-17 129.4 8.3 54 11-82 2-55 (246)
24 3rl5_A Metallophosphoesterase 99.3 1.4E-11 4.7E-16 128.3 13.8 70 8-132 55-124 (296)
25 3tgh_A Glideosome-associated p 99.2 1E-10 3.5E-15 124.2 15.6 260 11-320 2-304 (342)
26 1xm7_A Hypothetical protein AQ 99.2 1.7E-11 5.8E-16 118.9 7.2 81 12-131 1-84 (195)
27 1xzw_A Purple acid phosphatase 99.0 5.4E-09 1.9E-13 113.2 18.3 78 9-132 123-205 (426)
28 2qfp_A Purple acid phosphatase 99.0 3.9E-09 1.3E-13 114.2 14.9 78 9-132 116-198 (424)
29 3ive_A Nucleotidase; structura 98.8 1.6E-08 5.3E-13 112.6 12.4 217 11-276 5-254 (509)
30 2z1a_A 5'-nucleotidase; metal- 98.8 1.8E-08 6.3E-13 113.1 12.8 203 9-259 26-244 (552)
31 2wdc_A SOXB, sulfur oxidation 98.8 1.6E-08 5.4E-13 114.0 12.2 185 39-276 106-307 (562)
32 1hp1_A 5'-nucleotidase; metall 98.8 1.6E-08 5.6E-13 112.4 11.1 205 9-259 5-233 (516)
33 3qfk_A Uncharacterized protein 98.6 1.4E-07 4.8E-12 105.3 12.4 216 10-276 17-266 (527)
34 4h2g_A 5'-nucleotidase; dimer, 98.6 1.8E-07 6.1E-12 105.0 11.3 203 8-258 21-245 (546)
35 3ztv_A NAD nucleotidase, NADN; 98.5 4.8E-07 1.6E-11 102.2 11.4 57 9-65 9-75 (579)
36 3jyf_A 2',3'-cyclic nucleotide 98.4 6.6E-06 2.2E-10 87.1 18.5 54 11-64 7-65 (339)
37 3gve_A YFKN protein; alpha-bet 98.3 3.7E-06 1.3E-10 89.0 14.0 55 11-65 10-69 (341)
38 1g5b_A Serine/threonine protei 98.0 1.7E-06 5.7E-11 85.2 3.4 45 10-66 10-55 (221)
39 2qjc_A Diadenosine tetraphosph 97.9 4.5E-06 1.5E-10 84.9 4.3 42 13-66 19-61 (262)
40 3c9f_A 5'-nucleotidase; 2',3'- 97.9 1.5E-05 5.1E-10 89.7 8.8 59 6-64 9-73 (557)
41 1t71_A Phosphatase, conserved 97.8 8.6E-05 3E-09 76.6 11.0 191 11-273 3-203 (281)
42 2dfj_A Diadenosinetetraphospha 97.8 1.3E-05 4.3E-10 82.6 4.3 68 13-131 1-69 (280)
43 4h1s_A 5'-nucleotidase; hydrol 97.6 0.00018 6.2E-09 80.1 11.3 54 12-65 3-65 (530)
44 3e0j_A DNA polymerase subunit 97.5 0.00097 3.3E-08 73.3 14.1 54 9-65 197-258 (476)
45 1t70_A Phosphatase; crystal, X 97.5 0.00057 1.9E-08 69.5 11.1 186 13-273 1-193 (255)
46 2z72_A Protein-tyrosine-phosph 97.4 0.00017 5.7E-09 76.2 6.5 55 11-81 69-131 (342)
47 2z06_A Putative uncharacterize 97.2 0.0031 1.1E-07 63.9 13.2 182 13-273 1-190 (252)
48 2ie4_C PP2A-alpha;, serine/thr 97.2 0.00058 2E-08 71.3 7.4 74 12-132 49-122 (309)
49 1wao_1 Serine/threonine protei 97.1 0.00095 3.3E-08 73.0 8.3 51 11-73 211-262 (477)
50 1fjm_A Protein serine/threonin 97.0 0.00098 3.4E-08 70.2 7.2 72 13-131 57-128 (330)
51 3h63_A Serine/threonine-protei 96.9 0.0019 6.6E-08 67.5 8.7 51 10-72 57-108 (315)
52 3icf_A PPT, serine/threonine-p 96.8 0.0025 8.6E-08 67.2 8.8 51 11-73 62-113 (335)
53 3e7a_A PP-1A, serine/threonine 96.8 0.0017 5.8E-08 67.5 7.2 48 13-72 56-103 (299)
54 3ll8_A Serine/threonine-protei 96.6 0.003 1E-07 67.1 7.2 48 13-72 70-117 (357)
55 1aui_A Calcineurin, serine/thr 96.6 0.0029 1E-07 70.1 7.2 49 12-72 82-130 (521)
56 1b34_A Protein (small nuclear 96.4 0.00058 2E-08 61.6 0.1 17 584-600 101-117 (119)
57 2yeq_A Apased, PHOD, alkaline 94.6 0.042 1.4E-06 61.2 6.8 44 10-66 114-157 (527)
58 1b34_A Protein (small nuclear 94.5 0.0066 2.3E-07 54.7 0.1 16 584-599 97-112 (119)
59 3flo_A DNA polymerase alpha su 93.5 0.14 4.9E-06 56.0 8.0 51 10-67 145-196 (460)
60 1g5b_A Serine/threonine protei 67.2 2.5 8.6E-05 40.6 2.5 30 244-277 177-206 (221)
61 3w01_A Heptaprenylglyceryl pho 50.4 32 0.0011 34.1 7.1 47 45-130 30-76 (235)
62 4e7p_A Response regulator; DNA 45.0 9.6 0.00033 33.3 2.2 57 7-63 15-78 (150)
63 3tnj_A Universal stress protei 43.5 41 0.0014 29.2 6.1 19 40-58 98-116 (150)
64 3vzx_A Heptaprenylglyceryl pho 43.3 31 0.001 34.1 5.7 48 44-130 24-71 (228)
65 2pjk_A 178AA long hypothetical 42.5 33 0.0011 32.3 5.6 28 34-61 63-91 (178)
66 1mjh_A Protein (ATP-binding do 40.8 60 0.002 28.5 6.9 12 117-128 150-161 (162)
67 1jmv_A USPA, universal stress 38.3 49 0.0017 28.3 5.8 21 40-60 91-111 (141)
68 3fdx_A Putative filament prote 33.1 50 0.0017 28.3 4.9 21 39-59 94-114 (143)
69 3pzy_A MOG; ssgcid, seattle st 32.9 86 0.003 28.9 6.8 24 38-61 53-76 (164)
70 2lpm_A Two-component response 28.6 36 0.0012 29.9 3.2 66 10-81 6-77 (123)
71 3men_A Acetylpolyamine aminohy 26.3 1.4E+02 0.0049 31.3 7.8 48 34-81 274-328 (362)
72 2dum_A Hypothetical protein PH 26.2 80 0.0027 28.0 5.2 16 116-131 146-161 (170)
73 2pbq_A Molybdenum cofactor bio 25.6 1.7E+02 0.0057 27.2 7.5 27 35-61 51-78 (178)
74 3hdg_A Uncharacterized protein 25.4 1.3E+02 0.0046 24.9 6.3 54 10-63 5-63 (137)
75 3n53_A Response regulator rece 25.1 1.2E+02 0.0042 25.3 6.0 25 39-63 34-58 (140)
76 3cqj_A L-ribulose-5-phosphate 24.9 2.3E+02 0.0078 27.5 8.8 55 28-83 98-153 (295)
77 1qv9_A F420-dependent methylen 23.9 4.2E+02 0.014 26.5 9.9 66 36-148 49-114 (283)
78 2g2c_A Putative molybdenum cof 23.8 1.2E+02 0.0042 27.8 6.0 27 35-61 53-79 (167)
79 3eod_A Protein HNR; response r 23.6 1.6E+02 0.0053 24.2 6.3 54 10-63 5-63 (130)
80 3rfq_A Pterin-4-alpha-carbinol 22.9 98 0.0033 29.3 5.2 27 35-61 73-99 (185)
81 3s3t_A Nucleotide-binding prot 22.5 1.1E+02 0.0038 26.1 5.2 19 40-58 96-115 (146)
82 4gqb_C Histone H4 peptide; TIM 22.0 37 0.0013 21.5 1.3 6 583-588 2-7 (26)
83 1ub1_A MECP2, attachment regio 22.0 64 0.0022 29.3 3.5 8 583-590 120-127 (133)
84 3bbo_N Ribosomal protein L15; 21.8 91 0.0031 31.3 4.9 11 547-557 63-73 (257)
85 1iv0_A Hypothetical protein; r 21.5 1.9E+02 0.0065 24.4 6.3 25 34-58 34-58 (98)
86 3hv2_A Response regulator/HD d 21.3 2E+02 0.0068 24.5 6.7 57 6-63 8-70 (153)
87 3cpq_A 50S ribosomal protein L 21.1 93 0.0032 26.7 4.3 22 40-61 26-47 (110)
88 2qjc_A Diadenosine tetraphosph 21.0 83 0.0028 31.0 4.5 31 245-277 196-226 (262)
89 3ngf_A AP endonuclease, family 20.8 1.2E+02 0.004 29.4 5.5 53 29-83 84-137 (269)
90 3f6p_A Transcriptional regulat 20.7 1.8E+02 0.006 23.7 6.0 19 40-58 35-53 (120)
91 3q9b_A Acetylpolyamine amidohy 20.5 1.5E+02 0.0052 30.8 6.5 48 34-81 256-310 (341)
92 3cz5_A Two-component response 20.4 2.2E+02 0.0074 24.2 6.8 53 11-63 4-63 (153)
No 1
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=100.00 E-value=3.8e-81 Score=684.80 Aligned_cols=390 Identities=45% Similarity=0.823 Sum_probs=346.7
Q ss_pred CCCCCCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccC
Q 006814 6 REDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLN 85 (630)
Q Consensus 6 ~~~~~~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g 85 (630)
..++.++|||||+||+|||+...+..++.|.+.+|+++++.|.+++||+||++|||||...|+..++..+++.|+++|+|
T Consensus 70 ~~~~~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g 149 (472)
T 4fbk_A 70 SAGSENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLG 149 (472)
T ss_dssp ---CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBS
T ss_pred CCCCCCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhccc
Confidence 34568899999999999999888888999999999999999999999999999999999999999999999999999999
Q ss_pred CCccceeeechhhhhc-ccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhhCCceeEccceeecCCCccc
Q 006814 86 DRPVQFQVVSDQAVNF-QNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGE 164 (630)
Q Consensus 86 ~~p~~~~~lsd~~~~f-~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~~glVn~fg~~~l~~~~~~~ 164 (630)
|+||+||+|||+..+| .+.|++|||||||++++||||+|+||||.+.+.+..+++++|..+|++++||... ..++
T Consensus 150 ~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~~~~~s~~~LL~~~g~v~l~g~~~----~~d~ 225 (472)
T 4fbk_A 150 DKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVP----ENDN 225 (472)
T ss_dssp SCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC--CCCHHHHHHHTTSCEECCCCS----CSSS
T ss_pred CCcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCccccccccHHHHhccCCcEEEeCCcc----cCCc
Confidence 9999999999999999 5789999999999999999999999999998876678999999999999999853 3467
Q ss_pred eeEEEEEEeeCCeeEEEEecCCCChHHHHhhhcChhHHhhcChhhhhhhcCCCceEEEEEccCCCCCCCccccccccCCC
Q 006814 165 ITVYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPR 244 (630)
Q Consensus 165 i~~~Pi~l~kg~~~valyGl~~i~derl~~~f~~~~~v~~l~p~~~~~~~~~~~fnIlvlHq~~~~~~~~~~i~e~~l~~ 244 (630)
+.+.|+++++|.++++|||+||++++++.+++.+ +.+.++.|... .++||||+|+|+++.++++.+++++.+++.
T Consensus 226 i~~~pv~l~kg~~~valyGl~y~~d~rl~r~~~e-~~v~~~~p~~~----~~~~~nIlvlH~~~~~~~~~~yipe~ll~~ 300 (472)
T 4fbk_A 226 IVVSPILLQKGFTKLALYGISNVRDERLYHSFRE-NKVKFLRPDLY----RDEWFNLLTVHQNHSAHTPTSYLPESFIQD 300 (472)
T ss_dssp EEECCEEEEETTEEEEEEECCCCCHHHHHHHHHT-TCEEEEEESTT----GGGEEEEEEEESCSCCSSTTSSCCGGGSCT
T ss_pred eeEEEEEEEeCCceEEEEecCCCchhhhhhhhhh-hhhhhhCcccc----cCCceEEEEecCCccCCCccccCChhhhhc
Confidence 8899999999999999999999999999888876 46777766421 257999999999999887778899999999
Q ss_pred CCcEEEeCcccccccCCeecCCCCceEEcCCCCcccccccCccCCcEEEEEEEeCCceEEEEEECCCCCcEEEEEEEeec
Q 006814 245 FLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPLTSVRPFEYTEIILKD 324 (630)
Q Consensus 245 ~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS~~~ts~~egE~~~Kgv~lleI~~~~~~~e~IpL~tvRpf~~~ei~L~~ 324 (630)
++|||+|||+|.+++.+...+..+.+++||||+++++++++|.++|+|+||+|+++.+++++|||.++|||++.+|+|++
T Consensus 301 g~DyValGH~H~~~~~~~~~~~~g~~ivyPGS~~~~s~~e~E~~~kg~~lveI~~~~v~ve~I~L~t~Rpf~~~~i~L~~ 380 (472)
T 4fbk_A 301 FYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATSLSPGETAPKHCGILNITGKDFHLEKIRLRTVRPFIMKDIILSE 380 (472)
T ss_dssp TCSEEEEESCCSCEEEEEEETTTTEEEEECCCSSCSSCCGGGCSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEEGGG
T ss_pred CCCEEEecCcccceeeecccCCCCeEEEECCCccccccCccCCCCCEEEEEEEECCEEEEEEEECCCcccEEEEEEEEec
Confidence 99999999999998765444555689999999999999988889999999999999999999999999999999999999
Q ss_pred CCCCCC--CCHhHHHHHHHHHHHHHHHHhhhccc---------ccccCCCCEEEEEEeecc-ccccChhhHhhHhhhccc
Q 006814 325 EADIDP--DDQNSILEHLDKVVRNLIERSSKKTV---------NRSELKLPLVRIKVDYSG-FMTINPQRFGQKYVGKVA 392 (630)
Q Consensus 325 ~~~~~~--~~~~~v~~~l~~~v~~li~~a~~~~~---------~~~~~~~PLiRLrV~~~g-~~~~n~~rfg~~f~~~va 392 (630)
..++.+ ++.++|.++|.+.|++||++|+++|. ...++++|||||||+||| |+++||+||||+|+|+||
T Consensus 381 ~~~~~~~~~~~~~v~~~l~~~v~~~i~~a~~~~~~~~~~~~~~~~~~~~~plirl~v~~~~~~~~~n~~rf~~~f~~~va 460 (472)
T 4fbk_A 381 VSSIPPMVENKKEVLTYLISKVEEAITEANAQWYEAQGTVPVVENEKPPLPLIRLRVDYTGGYQTENPQRFSNRFVGRVA 460 (472)
T ss_dssp CSSCCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCTTSCCCCCCEEEEEEECTTTCCCCCHHHHHGGGTTTCS
T ss_pred ccccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCcEEEEEEEecCCCcccCHhHHhhhhCCccc
Confidence 876664 36889999999999999999988653 234688999999999996 999999999999999999
Q ss_pred CccceEEEEecc
Q 006814 393 NPQDILIFSKSS 404 (630)
Q Consensus 393 Np~dil~f~k~~ 404 (630)
||+|||+|+|||
T Consensus 461 np~d~~~f~~~~ 472 (472)
T 4fbk_A 461 NATDVVQFYLKK 472 (472)
T ss_dssp CSSCSEEEECCC
T ss_pred ChhheeEEEeCc
Confidence 999999999763
No 2
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=100.00 E-value=1.6e-81 Score=682.41 Aligned_cols=391 Identities=45% Similarity=0.817 Sum_probs=336.2
Q ss_pred CCCCCCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccC
Q 006814 6 REDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLN 85 (630)
Q Consensus 6 ~~~~~~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g 85 (630)
...+.++|||+|+||+|||+...+..++.|.+.+|+++++.|++++||+||++|||||...|+.+++..+++.|+++|+|
T Consensus 7 ~~~~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g 86 (417)
T 4fbw_A 7 ELHNENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLG 86 (417)
T ss_dssp ---CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBS
T ss_pred CCCCCCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhccc
Confidence 34567899999999999999988888999999999999999999999999999999999999999999999999999999
Q ss_pred CCccceeeechhhhhc-ccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhhCCceeEccceeecCCCccc
Q 006814 86 DRPVQFQVVSDQAVNF-QNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGE 164 (630)
Q Consensus 86 ~~p~~~~~lsd~~~~f-~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~~glVn~fg~~~l~~~~~~~ 164 (630)
|+||+||+|||++.+| .+.|+++||||||++++||||+|+||||.+.+.+..+++++|..+|++++||... ..++
T Consensus 87 ~~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~~~s~~~lL~~~g~v~l~g~~~----~~~~ 162 (417)
T 4fbw_A 87 DKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVP----ENDN 162 (417)
T ss_dssp SCCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-----CCCHHHHHHHTTSCEECCCCC-------C
T ss_pred CCcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCccccccccHHHHhccCCeEEEeCCcc----cCCc
Confidence 9999999999999999 5789999999999999999999999999998876678999999999999999853 2467
Q ss_pred eeEEEEEEeeCCeeEEEEecCCCChHHHHhhhcChhHHhhcChhhhhhhcCCCceEEEEEccCCCCCCCccccccccCCC
Q 006814 165 ITVYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPR 244 (630)
Q Consensus 165 i~~~Pi~l~kg~~~valyGl~~i~derl~~~f~~~~~v~~l~p~~~~~~~~~~~fnIlvlHq~~~~~~~~~~i~e~~l~~ 244 (630)
+.+.|+++++|.++++|||+||++++++.+.+.+ +.+.++.|... .++||||+|+||++.++++.+++++.+++.
T Consensus 163 i~~~pv~l~~g~~~valyG~~~~~d~rl~r~~~~-~~v~~~~p~~~----~~~~~nIlvlH~~~~~~~~~~yip~~l~~~ 237 (417)
T 4fbw_A 163 IVVSPILLQKGFTKLALYGISNVRDERLYHSFRE-NKVKFLRPDLY----RDEWFNLLTVHQNHSAHTPTSYLPESFIQD 237 (417)
T ss_dssp EEECCEEEEETTEEEEEEEECCCCHHHHHHHHHT-TCEEEEEESTT----TTTSEEEEEEESCSSCSSSSSSCCGGGSCT
T ss_pred eeEEeEEEEecCceEEEEeccCCchhhhhhhhhh-hhhhhcCcccc----cCCceEEEEecCCccCCCCcccCchhHhhc
Confidence 8899999999999999999999999999888876 46777766421 358999999999999887778899999999
Q ss_pred CCcEEEeCcccccccCCeecCCCCceEEcCCCCcccccccCccCCcEEEEEEEeCCceEEEEEECCCCCcEEEEEEEeec
Q 006814 245 FLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPLTSVRPFEYTEIILKD 324 (630)
Q Consensus 245 ~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS~~~ts~~egE~~~Kgv~lleI~~~~~~~e~IpL~tvRpf~~~ei~L~~ 324 (630)
++|||+|||+|.+++.+...+..+.+++||||+++++++++|.++|+|++|+|+++.+++++|||.++|||++.+|+|++
T Consensus 238 ~~DyvalGH~H~~~~~~~~~~~~g~~i~~PGS~~~~s~~e~E~~~kg~~lvei~~~~~~~e~i~l~~~Rpf~~~~v~L~~ 317 (417)
T 4fbw_A 238 FYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATSLSPGETAPKHCGILNITGKDFHLEKIRLRTVRPFIMKDIILSE 317 (417)
T ss_dssp TCSEEEEESCCSCEEEEEEETTTTEEEEECCCSSCSSCCHHHHSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEEGGG
T ss_pred CCCEEEecCccccceeccccCCCCEEEEECCCCCcCCCccccCCCCEEEEEEEECCEEEEEEEECCCcccEEEEEEEeec
Confidence 99999999999998765444555689999999999999987788999999999999999999999999999999999999
Q ss_pred CCCCCC--CCHhHHHHHHHHHHHHHHHHhhhccc---------ccccCCCCEEEEEEeecc-ccccChhhHhhHhhhccc
Q 006814 325 EADIDP--DDQNSILEHLDKVVRNLIERSSKKTV---------NRSELKLPLVRIKVDYSG-FMTINPQRFGQKYVGKVA 392 (630)
Q Consensus 325 ~~~~~~--~~~~~v~~~l~~~v~~li~~a~~~~~---------~~~~~~~PLiRLrV~~~g-~~~~n~~rfg~~f~~~va 392 (630)
..++.+ .+.++|.++|.+.|++||++|++++. ...++++|||||||+||| |+++||+||||+|+||||
T Consensus 318 ~~~~~~~~~~~~~~~~~l~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~plirl~v~~~~~~~~~n~~~f~~~~~~~va 397 (417)
T 4fbw_A 318 VSSIPPMVENKKEVLTYLISKVEEAITEANAQWYEAQGTVPVVENEKPPLPLIRLRVDYTGGYQTENPQRFSNRFVGRVA 397 (417)
T ss_dssp CTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCTTSCCCCCCEEEEEEECTTTCCCCCHHHHHHTTTTTCS
T ss_pred ccccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCceeEEEEEecCCccccCHHHHHHhhccccc
Confidence 866654 36889999999999999999988653 234688999999999996 999999999999999999
Q ss_pred CccceEEEEeccc
Q 006814 393 NPQDILIFSKSSK 405 (630)
Q Consensus 393 Np~dil~f~k~~~ 405 (630)
||+|||+|+|+++
T Consensus 398 n~~d~~~~~~~~~ 410 (417)
T 4fbw_A 398 NATDVVQFYLKKV 410 (417)
T ss_dssp CTTCSEEEECC--
T ss_pred ChHHeeeeeeccC
Confidence 9999999997643
No 3
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-80 Score=675.76 Aligned_cols=393 Identities=50% Similarity=0.860 Sum_probs=334.6
Q ss_pred CCCCCCCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhcc
Q 006814 5 PREDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCL 84 (630)
Q Consensus 5 ~~~~~~~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~ 84 (630)
...+..++|||||+||+|||+...+..++.|.+.+|+++++.+.+++||+||++|||||...|+..++..++++|++||+
T Consensus 25 ~~~~~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~ 104 (431)
T 3t1i_A 25 DALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCM 104 (431)
T ss_dssp --CCGGGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHB
T ss_pred cCCCCCCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhc
Confidence 34467789999999999999998888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCccceeeechhhhhcc-cccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhhCCceeEccceeecCCCcc
Q 006814 85 NDRPVQFQVVSDQAVNFQ-NKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVG 163 (630)
Q Consensus 85 g~~p~~~~~lsd~~~~f~-~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~~glVn~fg~~~l~~~~~~ 163 (630)
||+||+||+|||++++|. +.|+.+||+|||++++||||+|+||||++.+.+.++++++|+.+|+++|||+.. .++
T Consensus 105 ~~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g~~~l~~~~lL~~~glv~~fg~~~----~~e 180 (431)
T 3t1i_A 105 GDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTGADALCALDILSCAGFVNHFGRSM----SVE 180 (431)
T ss_dssp CSSCCCCEECSCC------------------CCBCSCEEECCCSSSCCBTTTTBCHHHHHHHHTSEEECCCCC----CSS
T ss_pred cCCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcccccccCHHHHhccCCcEEEECCcC----ccc
Confidence 999999999999999998 579999999999999999999999999999888889999999999999999742 356
Q ss_pred ceeEEEEEEeeCCeeEEEEecCCCChHHHHhhhcChhHHhhcChhhhhhhcCCCceEEEEEccCCCCCCCccccccccCC
Q 006814 164 EITVYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLP 243 (630)
Q Consensus 164 ~i~~~Pi~l~kg~~~valyGl~~i~derl~~~f~~~~~v~~l~p~~~~~~~~~~~fnIlvlHq~~~~~~~~~~i~e~~l~ 243 (630)
.+.+.|+++++|+++++|||+||.+++++.+++.+ ..+.++.|... .++|+||+++|+++...+...++++.+++
T Consensus 181 ~i~~~Pv~l~~g~~~valyGl~~~~~~~l~~~~~~-~~v~~~~p~~~----~~~~~~Ilv~H~~~~~~g~~~~ip~~l~~ 255 (431)
T 3t1i_A 181 KIDISPVLLQKGSTKIALYGLGSIPDERLYRMFVN-KKVTMLRPKED----ENSWFNLFVIHQNRSKHGSTNFIPEQFLD 255 (431)
T ss_dssp CEEECCEEEEETTEEEEEEEECCCCHHHHHHHHHT-TCEEECCCSSC----GGGEEEEEEECSCCSCSSSSSSCCGGGSC
T ss_pred ceeeEEEEEecCCEeEEEEeCCCCCHHHHhhhhcc-ccceeeccccc----CCCceEEEEECCCccCCCccccCCHhHhh
Confidence 78889999999999999999999999999988865 35667776421 25799999999998776677889999999
Q ss_pred CCCcEEEeCcccccccCCeecCCCCceEEcCCCCcccccccCccCCcEEEEEEEeCCceEEEEEECCCCCcEEEEEEEee
Q 006814 244 RFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPLTSVRPFEYTEIILK 323 (630)
Q Consensus 244 ~~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS~~~ts~~egE~~~Kgv~lleI~~~~~~~e~IpL~tvRpf~~~ei~L~ 323 (630)
.++|||+|||+|.+++.+...+..+++++||||++++|++++|.++|+|++|+|+++.+++++|||.++|||++.+|+|+
T Consensus 256 ~~~Dyv~lGH~H~~~~~~~~~~~~~~~i~yPGS~~~~s~~e~E~~~k~~~lvei~~~~~~ve~i~l~~~R~f~~~~v~l~ 335 (431)
T 3t1i_A 256 DFIDLVIWGHEHECKIAPTKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIPLHTVRQFFMEDIVLA 335 (431)
T ss_dssp TTCCEEEECSCCSCEEEEEECTTTCCEEEECCCSSCCSCCHHHHSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEEGG
T ss_pred CCCCEEEecccccccccccccCCCCEEEEeCCCCcccCcCcccCCCCEEEEEEEECCEEEEEEEECCCcceEEEEEEEEe
Confidence 99999999999999876544444568999999999999998778999999999999999999999999999999999999
Q ss_pred cCCCC----CCCCHhHHHHHHHHHHHHHHHHhhhccc-ccccCCCCEEEEEEeecc-ccccChhhHhhHhhhcccCccce
Q 006814 324 DEADI----DPDDQNSILEHLDKVVRNLIERSSKKTV-NRSELKLPLVRIKVDYSG-FMTINPQRFGQKYVGKVANPQDI 397 (630)
Q Consensus 324 ~~~~~----~~~~~~~v~~~l~~~v~~li~~a~~~~~-~~~~~~~PLiRLrV~~~g-~~~~n~~rfg~~f~~~vaNp~di 397 (630)
+..+. .+++.++|.++|.++|++||++|++++. ...++++|||||||+|+| |+++||+||||+|+|+||||+||
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~plirl~v~~~~~~~~~n~~rf~~~~~~~van~~d~ 415 (431)
T 3t1i_A 336 NHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQPEKPLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKDI 415 (431)
T ss_dssp GCTTTCCSSCTTHHHHHHHHHHHHHHHHHHHHHHHTTTCSSSCSSCEEEEEEECTTTCCCCCSHHHHHHHTTTCSCSSSS
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEEEecCCCCccCHHHHHHhhCCcccChHHe
Confidence 87542 2456789999999999999999987653 456789999999999997 99999999999999999999999
Q ss_pred EEEEecccc
Q 006814 398 LIFSKSSKK 406 (630)
Q Consensus 398 l~f~k~~~~ 406 (630)
|+|+|++++
T Consensus 416 ~~~~~~~~~ 424 (431)
T 3t1i_A 416 IHFFRHREQ 424 (431)
T ss_dssp EEEEC----
T ss_pred EEEEEecch
Confidence 999976543
No 4
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=100.00 E-value=1.3e-33 Score=297.81 Aligned_cols=294 Identities=26% Similarity=0.335 Sum_probs=201.2
Q ss_pred cEEEEEcCCCCCCCC-CchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccCCCccce
Q 006814 13 VRILVATDCHLGYME-KDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQF 91 (630)
Q Consensus 13 mKILh~SD~HLG~~~-~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g~~p~~~ 91 (630)
|||+|+||+|+|+.. ..+.|.++.+.+|+++++.|++++||+||++|||||...|+..++..+.++|+++.
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~-------- 72 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPK-------- 72 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHH--------
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHH--------
Confidence 899999999999854 34567788899999999999999999999999999999899888888888888762
Q ss_pred eeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhhCCceeEccceeecCCCccceeE----
Q 006814 92 QVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITV---- 167 (630)
Q Consensus 92 ~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~~glVn~fg~~~l~~~~~~~i~~---- 167 (630)
+.++|||+|+||||.+.+. .+++++|...|+|++++...-.- ....+..
T Consensus 73 ------------------------~~~~~v~~v~GNHD~~~~~--~~~~~~l~~~g~v~vl~~~~~~~-~~~~~~~~~~~ 125 (333)
T 1ii7_A 73 ------------------------EHSIPVFAIEGNHDRTQRG--PSVLNLLEDFGLVYVIGMRKEKV-ENEYLTSERLG 125 (333)
T ss_dssp ------------------------TTTCCEEEECCTTTCCSSS--CCHHHHHHHTTSCEECEEESSCC-CSSSEEEEECT
T ss_pred ------------------------HCCCcEEEeCCcCCCccCC--cCHHHHHHHcCCcEEeccccccc-ccceeeecccC
Confidence 3478999999999987543 35678899999888887321000 0001111
Q ss_pred -EEEEEeeCCeeEEEEecCCCChHHHHhhhcChhHHh-hcChhhhhhhcCCCceEEEEEccCCCCCC---C--ccccccc
Q 006814 168 -YPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQ-WMRPEAQEECQVSDWFNILVLHQNRVKTN---P--KNAINEH 240 (630)
Q Consensus 168 -~Pi~l~kg~~~valyGl~~i~derl~~~f~~~~~v~-~l~p~~~~~~~~~~~fnIlvlHq~~~~~~---~--~~~i~e~ 240 (630)
.++++......++|||++|.....+.... ..+. .+. .+..||+++|+++.+.. . ...+...
T Consensus 126 ~~~~~~~~~~~~v~i~g~~~~~~~~~~~~~---~~l~~~~~---------~~~~~Ill~H~~~~~~~~~~~~~~~~~~~~ 193 (333)
T 1ii7_A 126 NGEYLVKGVYKDLEIHGMKYMSSAWFEANK---EILKRLFR---------PTDNAILMLHQGVREVSEARGEDYFEIGLG 193 (333)
T ss_dssp TSCEEEEEEETTEEEEEECCCCHHHHHSST---THHHHHCC---------CCSSEEEEEECCBHHHHHTTTCCCCSBCGG
T ss_pred CCceeeccCcCCEEEEecCCcCHHHHHHHH---HHHHHhhC---------CCCCeEEEEcCChhhcccccccccceecHH
Confidence 12222111146899999998765543210 0011 111 12359999999875321 1 1223344
Q ss_pred cCCCCCcEEEeCcccccccCCeecCCCCceEEcCCCCcccccccC--------------ccCCcEEEEEEEeCCceEEEE
Q 006814 241 FLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEG--------------ESKPKHVLLLEIKENQYRPTK 306 (630)
Q Consensus 241 ~l~~~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS~~~ts~~eg--------------E~~~Kgv~lleI~~~~~~~e~ 306 (630)
.++.++|||||||+|.++. +...+..++||||+.+++++|. +..+|||++|+ ..++++
T Consensus 194 ~l~~~~dyvalGH~H~~q~----~~~~~~~i~ypGS~~~~~~~E~~~~~~~~G~~~~p~~~~~kg~~lv~----~~~~~~ 265 (333)
T 1ii7_A 194 DLPEGYLYYALGHIHKRYE----TSYSGSPVVYPGSLERWDFGDYEVRYEWDGIKFKERYGVNKGFYIVE----DFKPRF 265 (333)
T ss_dssp GSCTTCSEEEEESCSSCEE----EEETTEEEEECCCSSCCSGGGCSEEEEECSSSEEEEECCCCEEEEEE----TTEEEE
T ss_pred HCCccCCEEEcccccccee----cCCCCceEEEcCCCeecccchhccccccccccccccccCCCeEEEEe----cCceeE
Confidence 5567899999999999864 3322468999999999999873 23489999999 478999
Q ss_pred EECCCCCcEEEEEEEeecCCCCCCCCHhHHHHHHHHHHHHHHHHhhhcccccccCCCCEEEEEEeeccccccChhhHhhH
Q 006814 307 IPLTSVRPFEYTEIILKDEADIDPDDQNSILEHLDKVVRNLIERSSKKTVNRSELKLPLVRIKVDYSGFMTINPQRFGQK 386 (630)
Q Consensus 307 IpL~tvRpf~~~ei~L~~~~~~~~~~~~~v~~~l~~~v~~li~~a~~~~~~~~~~~~PLiRLrV~~~g~~~~n~~rfg~~ 386 (630)
+||.+ |||+..++... .+++ .+.+++++.. ..+.+++||+|.+.. .++...+-+.
T Consensus 266 i~l~~-r~~~~~~i~~~---------~~~l----~~~~~~~~~~---------~~~~~~v~v~l~~~~--~~~~~~i~~~ 320 (333)
T 1ii7_A 266 VEIKV-RPFIDVKIKGS---------EEEI----RKAIKRLIPL---------IPKNAYVRLNIGWRK--PFDLTEIKEL 320 (333)
T ss_dssp EECCC-CCEEEEEEEEC---------HHHH----HHHHHHHGGG---------SCTTCEEEEEEEESS--CCCCHHHHHH
T ss_pred EECCC-CceEEEEecCC---------HHHH----HHHHHHHhhc---------CCCCcEEEEEEEecC--ccCHHHHHHH
Confidence 99998 99986665411 2223 3334333321 124689999999764 4555444433
No 5
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=100.00 E-value=7.1e-33 Score=298.27 Aligned_cols=279 Identities=21% Similarity=0.306 Sum_probs=193.0
Q ss_pred CCCCCccEEEEEcCCCCCCCCCc-hhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccC
Q 006814 7 EDIANTVRILVATDCHLGYMEKD-EIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLN 85 (630)
Q Consensus 7 ~~~~~~mKILh~SD~HLG~~~~d-~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g 85 (630)
+....+|||+|+||+|+|....+ ..|..+.+.+|+++++.|++++||+||++|||||...|+..++..++++|+++.
T Consensus 15 ~~~~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~-- 92 (386)
T 3av0_A 15 VPRGSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLH-- 92 (386)
T ss_dssp ---CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHH--
T ss_pred ccCCCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHH--
Confidence 44567899999999999976433 346677889999999999999999999999999999999888888888888763
Q ss_pred CCccceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhhCCceeEccceeecCCCccce
Q 006814 86 DRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEI 165 (630)
Q Consensus 86 ~~p~~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~~glVn~fg~~~l~~~~~~~i 165 (630)
..++|||+|+||||.+......+++.+|... +++|+..
T Consensus 93 ------------------------------~~~~pv~~v~GNHD~~~~~~~~~~~~~l~~~--v~~l~~~---------- 130 (386)
T 3av0_A 93 ------------------------------ENNIKVYIVAGNHEMPRRLGEESPLALLKDY--VKILDGK---------- 130 (386)
T ss_dssp ------------------------------HTTCEEEECCCGGGSCSSTTSCCGGGGGTTT--CEECSEE----------
T ss_pred ------------------------------hcCCcEEEEcCCCCCCccccccCHHHHHHHH--eEEcCCC----------
Confidence 3468999999999998754433444555443 5555431
Q ss_pred eEEEEEEeeCCeeEEEEecCCCChHHHHhhhcChhHHhhcChhhhhhhcCCCceEEEEEccCCCCCCCcc-ccccccCCC
Q 006814 166 TVYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKN-AINEHFLPR 244 (630)
Q Consensus 166 ~~~Pi~l~kg~~~valyGl~~i~derl~~~f~~~~~v~~l~p~~~~~~~~~~~fnIlvlHq~~~~~~~~~-~i~e~~l~~ 244 (630)
++.+. ++..+.|+|++|........+. ..+.++.+.. ..+.++|+++|++..+..+.. .+....++.
T Consensus 131 ---~v~~~-~~~~v~i~gl~~~~~~~~~~~~---~~l~~l~~~~-----~~~~~~Ill~H~~~~~~~~~~~~~~~~~l~~ 198 (386)
T 3av0_A 131 ---DVINV-NGEEIFICGTYYHKKSKREEML---DKLKNFESEA-----KNYKKKILMLHQGINPYIPLDYELEHFDLPK 198 (386)
T ss_dssp ---EEEEE-TTEEEEEEEECCCCSTTHHHHH---HHHHHHHHHH-----HTCSSEEEEECCCCTTTSSSSCSSCGGGSCC
T ss_pred ---cEEEe-CCCCEEEEeCCCCCHHHHHHHH---HHHHHhhhhc-----ccCCCEEEEECcCccccCCCCcccCHHHhhh
Confidence 23332 3467999999998654322221 1122232211 136799999999875432211 133334555
Q ss_pred CCcEEEeCcccccccCCeecCCCCceEEcCCCCcccccccCcc---CCcEEEEEEEeC---CceEEEEEECCCCCcEEEE
Q 006814 245 FLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGES---KPKHVLLLEIKE---NQYRPTKIPLTSVRPFEYT 318 (630)
Q Consensus 245 ~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS~~~ts~~egE~---~~Kgv~lleI~~---~~~~~e~IpL~tvRpf~~~ 318 (630)
+|||++||+|.++. .+..+..++||||+.++++.|.+. .+|+|++|++++ +.++++++|+ ..||| .
T Consensus 199 -~d~v~~GH~H~~~~----~~~~~~~i~ypGS~~~~~~~e~~~~~~~~kg~~lv~i~~~~~~~~~v~~i~l-~~r~~--~ 270 (386)
T 3av0_A 199 -FSYYALGHIHKRIL----ERFNDGILAYSGSTEIIYRNEYEDYKKEGKGFYLVDFSGNDLDISDIEKIDI-ECREF--V 270 (386)
T ss_dssp -CSEEEECSCCSCEE----EECSSSEEEECCCSSCCSGGGTHHHHHHCSEEEEEECCSSSCCGGGEEEEEC-CCCCE--E
T ss_pred -CCeEEccCCCCCcc----ccCCCceEEECCcccccCcchhccccCCCCEEEEEEEecCcCCCceEEEEEC-Cccee--E
Confidence 99999999999743 222346899999999999975321 579999999998 7789999999 47998 5
Q ss_pred EEEeecCCCCCCCCHhHHHHHHHHHHHHHHHHhhhcccccccCCCCEEEEEEe
Q 006814 319 EIILKDEADIDPDDQNSILEHLDKVVRNLIERSSKKTVNRSELKLPLVRIKVD 371 (630)
Q Consensus 319 ei~L~~~~~~~~~~~~~v~~~l~~~v~~li~~a~~~~~~~~~~~~PLiRLrV~ 371 (630)
++.+.+. +++. + ++++... ..+.++|||+|.
T Consensus 271 ~~~~~~~--------~~~~----~----~~~~~~~------~~~~~~v~l~l~ 301 (386)
T 3av0_A 271 EVNIKDK--------KSFN----E----AVNKIER------CKNKPVVFGKIK 301 (386)
T ss_dssp EEEECSH--------HHHH----H----HHHHHTS------SSSCCEEEEEEE
T ss_pred EEeCCCh--------hhHH----H----HHHHHHh------CCCCcEEEEEEE
Confidence 6655432 2232 2 2222221 245789999999
No 6
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.98 E-value=6.9e-31 Score=276.80 Aligned_cols=259 Identities=22% Similarity=0.262 Sum_probs=174.2
Q ss_pred CCCccEEEEEcCCCCC----CCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCC-CCCCCCCChHHHHHHHHHHHhhc
Q 006814 9 IANTVRILVATDCHLG----YMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGD-LFHENKPSRSTLVKAIEILRRHC 83 (630)
Q Consensus 9 ~~~~mKILh~SD~HLG----~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGD-LFd~~~Ps~~tl~~~~~~Lr~l~ 83 (630)
..++|||||+|||||| ....+..|..+...+|+++++.|++++||+||++|| |||...|+..++..+.++|+++.
T Consensus 15 ~~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~ 94 (336)
T 2q8u_A 15 NLKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMM 94 (336)
T ss_dssp TCCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHH
Confidence 4578999999999999 444455677888899999999999999999999999 99999999888878888888762
Q ss_pred cCCCccceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhhCC-ceeEccceeecCCCc
Q 006814 84 LNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACN-LVNYFGKMVLGGSGV 162 (630)
Q Consensus 84 ~g~~p~~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~~g-lVn~fg~~~l~~~~~ 162 (630)
.. +|||+|+||||.+. .. ....++...| ++++++...
T Consensus 95 --------------------------------~~-~pv~~i~GNHD~~~-~~--~~~~~l~~~g~nv~v~~~~~------ 132 (336)
T 2q8u_A 95 --------------------------------RT-APVVVLPGNHDWKG-LK--LFGNFVTSISSDITFVMSFE------ 132 (336)
T ss_dssp --------------------------------HH-SCEEECCC-------CH--HHHHHHHHHCSSEEECCSSS------
T ss_pred --------------------------------hc-CCEEEECCCCCccc-cc--cHHHHHHhcCCEEEEEeccc------
Confidence 22 89999999999876 32 2334555544 466665421
Q ss_pred cceeEEEEEEeeCCeeEEEEecCCCChHHHHhhhcCh--hHHhhcChhhhhhhcCCCceEEEEEccCCCCCCC---c---
Q 006814 163 GEITVYPILIRKGSTAVALYGLGNIRDERLNRMFQTP--HAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNP---K--- 234 (630)
Q Consensus 163 ~~i~~~Pi~l~kg~~~valyGl~~i~derl~~~f~~~--~~v~~l~p~~~~~~~~~~~fnIlvlHq~~~~~~~---~--- 234 (630)
.+ .|+.+. ...+.+||++|.....+...+... ..+.++...........+.++|+++|++..+... .
T Consensus 133 -~~--~~~~~~--~~~v~i~glp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~~~~~~ 207 (336)
T 2q8u_A 133 -PV--DVEAKR--GQKVRILPFPYPDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIEQG 207 (336)
T ss_dssp -CE--EEECTT--SCEEEEEEECCC-------CCSSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC--------
T ss_pred -cc--CceEEe--CCCEEEEECCCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCCCCccch
Confidence 11 133332 346999999998764432211100 0122221111000001467999999999765321 1
Q ss_pred --cccccccCCCCCcEEEeCcccccccCCeecCCCCceEEcCCCCcccccccCccCCcEEEEEEEeCC-ceEEEEEECCC
Q 006814 235 --NAINEHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKEN-QYRPTKIPLTS 311 (630)
Q Consensus 235 --~~i~e~~l~~~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS~~~ts~~egE~~~Kgv~lleI~~~-~~~~e~IpL~t 311 (630)
..++..+++.++|||++||+|.++.. .+ +..++||||+.+++++|. ..+|+|++|+++++ .++++++|+..
T Consensus 208 ~~~~v~~~l~~~~~d~v~~GH~H~~~~~----~~-~~~i~y~GS~~~~s~~e~-~~~~~~~lv~i~~~~~~~v~~i~~~~ 281 (336)
T 2q8u_A 208 REIIINRALIPSVVDYAALGHIHSFREI----QK-QPLTIYPGSLIRIDFGEE-ADEKGAVFVELKRGEPPRYERIDASP 281 (336)
T ss_dssp CCCEECGGGSCTTSSEEEEESCSSCEEE----EE-TTEEEECCCSSCCSGGGT-TCCCEEEEEEEETTSCCEEEEEECCC
T ss_pred hhcccCHHHccccCCEEEEccccCceEe----CC-CccEEECCCCcCCCcccc-CCCCEEEEEEEeCCCccEEEEEECCC
Confidence 12445667778999999999997643 22 248999999999999752 34899999999976 48999999998
Q ss_pred CCcEEEEEEE
Q 006814 312 VRPFEYTEII 321 (630)
Q Consensus 312 vRpf~~~ei~ 321 (630)
|||...++.
T Consensus 282 -r~~~~~~~~ 290 (336)
T 2q8u_A 282 -LPLKTLYYK 290 (336)
T ss_dssp -CCEEEEEEE
T ss_pred -EEEEEeecc
Confidence 999877663
No 7
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=99.97 E-value=8.5e-31 Score=281.77 Aligned_cols=250 Identities=23% Similarity=0.326 Sum_probs=175.2
Q ss_pred cEEEEEcCCCCCCC----CCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCC-CCCCCChHHHHHHHHHHHhhccCCC
Q 006814 13 VRILVATDCHLGYM----EKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLF-HENKPSRSTLVKAIEILRRHCLNDR 87 (630)
Q Consensus 13 mKILh~SD~HLG~~----~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLF-d~~~Ps~~tl~~~~~~Lr~l~~g~~ 87 (630)
|||||+||+|+|.. ..+..+..+...+|+++++.+.+++||+||++|||| |...|+..++..+.+.|.++.
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~---- 76 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMM---- 76 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHH----
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHH----
Confidence 89999999999997 555567778889999999999999999999999999 788899888877888887762
Q ss_pred ccceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhh--CCceeEccceeecCCCccce
Q 006814 88 PVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSA--CNLVNYFGKMVLGGSGVGEI 165 (630)
Q Consensus 88 p~~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~--~glVn~fg~~~l~~~~~~~i 165 (630)
.. +|||+|+||||... +.....+.. +..+.++..
T Consensus 77 ----------------------------~~-~~v~~i~GNHD~~~----~~~~~~~~~~~~~~~~~~~~----------- 112 (379)
T 3tho_B 77 ----------------------------RT-APVVVLPGNQDWKG----LKLFGNFVTSISSDITFVMS----------- 112 (379)
T ss_dssp ----------------------------HH-SCEEECCCTTSCTT----HHHHHHHHHTTCSSEEECCS-----------
T ss_pred ----------------------------hC-CCEEEEcCCCcccc----CccccccccccCCcceeecc-----------
Confidence 23 89999999999532 221222211 233333321
Q ss_pred eEEEEEEe-eCCeeEEEEecCCCChHHHHhhhcChhHHhhcChhhh----hhhcCCCceEEEEEccCCCCCCC-c-----
Q 006814 166 TVYPILIR-KGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQ----EECQVSDWFNILVLHQNRVKTNP-K----- 234 (630)
Q Consensus 166 ~~~Pi~l~-kg~~~valyGl~~i~derl~~~f~~~~~v~~l~p~~~----~~~~~~~~fnIlvlHq~~~~~~~-~----- 234 (630)
..|+.+. ..+..+.|||++|.........+.. ....|+..... ... ..+.++|+++|+.+.+..+ .
T Consensus 113 -~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~-~~~~~~I~l~H~~v~g~~~~~~se~~ 189 (379)
T 3tho_B 113 -FEPVDVEAKRGQKVRILPFPYPDESEALRKNEG-DFRFFLESRLNKLYEEAL-KKEDFAIFMGHFTVEGLAGYAGIEQG 189 (379)
T ss_dssp -SCCEEEECTTCCEEEEEEECCCCCC----CHHH-HHHHHHHHHHHHHHHHHH-TCSSEEEEEEESCBSCCCC-------
T ss_pred -cceEEEEcCCCCEEEEEECCCCCHHHHhhhhcc-chHHHHHHHHHHHHHHhc-CCCCCeEEEEeccccCCccCCCCccc
Confidence 1345554 2335899999999865332211111 11122211110 000 2578999999999876433 1
Q ss_pred --cccccccCCCCCcEEEeCcccccccCCeecCCCCceEEcCCCCcccccccCccCCcEEEEEEEeCCc-eEEEEEECCC
Q 006814 235 --NAINEHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQ-YRPTKIPLTS 311 (630)
Q Consensus 235 --~~i~e~~l~~~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS~~~ts~~egE~~~Kgv~lleI~~~~-~~~e~IpL~t 311 (630)
..++..+++.++||||+||+|.++ .+.+ +.+++||||+++++|+|. ..+|+|++|++++++ +++++|| ..
T Consensus 190 ~~~~v~~~~~~~~~dyvalGH~H~~q----~~~~-~~~i~y~GS~~~~~f~E~-~~~k~~~lv~~~~~~~~~v~~i~-~~ 262 (379)
T 3tho_B 190 REIIINRALIPSVVDYAALGHIHSFR----EIQK-QPLTIYPGSLIRIDFGEE-ADEKGAVFVELKRGEPPRYERID-AS 262 (379)
T ss_dssp CSCCBCGGGSCTTSSEEEEESCSSCE----EEEE-TTEEEECCCSSCCSGGGS-SSCCEEEEEECCSSSCCEEEEEE-CC
T ss_pred cccccCHHHcCcCCCEEEcccccCCe----EeCC-CCcEEecCCCCCCCcccc-cCCCEEEEEEEcCCCcceEEEeC-CC
Confidence 234567777889999999999964 4433 258999999999999862 457999999998654 7999999 77
Q ss_pred CCcEEEEEE
Q 006814 312 VRPFEYTEI 320 (630)
Q Consensus 312 vRpf~~~ei 320 (630)
.|||...++
T Consensus 263 ~r~~~~~~~ 271 (379)
T 3tho_B 263 PLPLKTLYY 271 (379)
T ss_dssp CCCEEEEEC
T ss_pred CeeeEEEEc
Confidence 899986664
No 8
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.80 E-value=2.6e-19 Score=180.23 Aligned_cols=242 Identities=17% Similarity=0.217 Sum_probs=140.5
Q ss_pred cEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhc--CCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccCCCccc
Q 006814 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK--EVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQ 90 (630)
Q Consensus 13 mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~--~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g~~p~~ 90 (630)
|||+|+||+|++..........+...+|+++++.+++. ++|+||++|||++...+ ..+..+.++|++
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~l~~--------- 69 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRP--EEYQVARQILGS--------- 69 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCH--HHHHHHHHHHTT---------
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCH--HHHHHHHHHHHh---------
Confidence 79999999999964322222256778899999999886 68999999999987543 333444444432
Q ss_pred eeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhhCCceeEccceeecCCCccceeEEEE
Q 006814 91 FQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPI 170 (630)
Q Consensus 91 ~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~~glVn~fg~~~l~~~~~~~i~~~Pi 170 (630)
.++|+++|+||||.... ....|... |+... .. .+... .
T Consensus 70 --------------------------l~~p~~~v~GNHD~~~~-----~~~~~~~~----~~~~~---~~-~~~~~---~ 107 (274)
T 3d03_A 70 --------------------------LNYPLYLIPGNHDDKAL-----FLEYLQPL----CPQLG---SD-ANNMR---C 107 (274)
T ss_dssp --------------------------CSSCEEEECCTTSCHHH-----HHHHHGGG----SGGGC---SC-GGGCC---E
T ss_pred --------------------------cCCCEEEECCCCCCHHH-----HHHHhhhh----hcCcc---cC-CCceE---E
Confidence 25899999999997531 11222221 11000 00 00000 1
Q ss_pred EEeeCCeeEEEEecCCCChHHHHhhhcChhHHhhcChhhhhhhcCCCceEEEEEccCCCCCCCc--c--cc-c----ccc
Q 006814 171 LIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPK--N--AI-N----EHF 241 (630)
Q Consensus 171 ~l~kg~~~valyGl~~i~derl~~~f~~~~~v~~l~p~~~~~~~~~~~fnIlvlHq~~~~~~~~--~--~i-~----e~~ 241 (630)
.+.. ..+.++|+...........+. ...++|+...... ..+...|+++|++....+.. + .+ . ..+
T Consensus 108 ~~~~--~~~~~i~ld~~~~~~~~~~~~-~~~~~wl~~~l~~---~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~ 181 (274)
T 3d03_A 108 AVDD--FATRLLFIDSSRAGTSKGWLT-DETISWLEAQLFE---GGDKPATIFMHHPPLPLGNAQMDPIACENGHRLLAL 181 (274)
T ss_dssp EECS--SSSEEEECCCCCTTCSSBCCC-HHHHHHHHHHHHH---HTTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHH
T ss_pred EEEe--CCEEEEEEeCCCCCCCCCeeC-HHHHHHHHHHHHh---CCCCCEEEEECCCCcccCCcccCcccCcCHHHHHHH
Confidence 1122 246677776542111000011 1234455432211 13567999999986543210 0 00 0 123
Q ss_pred CC-C-CCcEEEeCcccccccCCeecCCCCceEEcCCCCccccccc------CccCCcEEEEEEEeCCceEEEEEEC---C
Q 006814 242 LP-R-FLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIE------GESKPKHVLLLEIKENQYRPTKIPL---T 310 (630)
Q Consensus 242 l~-~-~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS~~~ts~~e------gE~~~Kgv~lleI~~~~~~~e~IpL---~ 310 (630)
+. . .+|+|++||+|..+.. ...+ ...+++|||.....+.. ....+++|.+++++++.+.++.+++ .
T Consensus 182 l~~~~~v~~vl~GH~H~~~~~--~~~g-~~~~~~pg~~~~~~~~~~~~~~~~~~~~~gy~i~~i~~~~~~~~~~~~~~~~ 258 (274)
T 3d03_A 182 VERFPSLTRIFCGHNHSLTMT--QYRQ-ALISTLPGTVHQVPYCHADTDPYYDLSPASCLMHRQVGEQWVSYQHSLAHYA 258 (274)
T ss_dssp HHHCTTEEEEEECSSSSCEEE--EETT-EEEEECCCSSCBCCCCSSCCSCEEBCCCCEEEEEEEETTEEEEEEEECSCCS
T ss_pred HHhCCCceEEEeCCCCCchhh--eECC-EEEEEcCCcceeeccCCCccccccccCCCceEEEEEeCCcEEEEEEecCCCC
Confidence 32 2 5899999999997642 2222 25788999986544321 1235789999999998888888777 3
Q ss_pred CCCcEE
Q 006814 311 SVRPFE 316 (630)
Q Consensus 311 tvRpf~ 316 (630)
.++||.
T Consensus 259 ~~~~f~ 264 (274)
T 3d03_A 259 GPWLYD 264 (274)
T ss_dssp CCEECC
T ss_pred CCCCcc
Confidence 345554
No 9
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.79 E-value=2.1e-18 Score=178.49 Aligned_cols=243 Identities=16% Similarity=0.159 Sum_probs=141.2
Q ss_pred CCCCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHh--cCCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccC
Q 006814 8 DIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQ--KEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLN 85 (630)
Q Consensus 8 ~~~~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~--~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g 85 (630)
.....|||+|+||+|++..........+....|+++++.+.+ .++|+||++|||++...+ ..+..+.++|+++.
T Consensus 21 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~l~~l~-- 96 (330)
T 3ib7_A 21 HPRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEP--AAYRKLRGLVEPFA-- 96 (330)
T ss_dssp SCCCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCH--HHHHHHHHHHHHHH--
T ss_pred CCCCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCH--HHHHHHHHHHHHHH--
Confidence 345689999999999987654433344678899999999998 899999999999997654 44445556665541
Q ss_pred CCccceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhhCCceeEccceeecCCCccce
Q 006814 86 DRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEI 165 (630)
Q Consensus 86 ~~p~~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~~glVn~fg~~~l~~~~~~~i 165 (630)
...++|||+|+||||.... ....+..... .++..
T Consensus 97 -----------------------------~~~~~pv~~v~GNHD~~~~-----~~~~~~~~~~--~~~~~---------- 130 (330)
T 3ib7_A 97 -----------------------------AQLGAELVWVMGNHDDRAE-----LRKFLLDEAP--SMAPL---------- 130 (330)
T ss_dssp -----------------------------HHHTCEEEECCCTTSCHHH-----HHHHHHCCCC--CCSCC----------
T ss_pred -----------------------------hhcCCCEEEeCCCCCCHHH-----HHHHhccccc--ccCCc----------
Confidence 0236899999999997321 1112211110 00000
Q ss_pred eEEEEEEeeCCeeEEEEecCCCChHHHHhhhcChhHHhhcChhhhhhhcCCCceEEEEEccCCCCCCCc--cc-------
Q 006814 166 TVYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPK--NA------- 236 (630)
Q Consensus 166 ~~~Pi~l~kg~~~valyGl~~i~derl~~~f~~~~~v~~l~p~~~~~~~~~~~fnIlvlHq~~~~~~~~--~~------- 236 (630)
...+..++ +.++++...........+ ....++|+...... ......|+++|+........ ..
T Consensus 131 ---~~~~~~~~--~~~i~lds~~~~~~~~~~-~~~q~~wl~~~l~~---~~~~~~iv~~Hh~p~~~~~~~~~~~~~~~~~ 201 (330)
T 3ib7_A 131 ---DRVCMIDG--LRIIVLDTSVPGHHHGEI-RASQLGWLAEELAT---PAPDGTILALHHPPIPSVLDMAVTVELRDQA 201 (330)
T ss_dssp ---CEEEEETT--EEEEECCCCCTTCCSBCC-CHHHHHHHHHHTTS---CCTTCEEEECSSCSSCCSSGGGGGGSBSCHH
T ss_pred ---ceEEEeCC--EEEEEecCCCCCCCCCcc-CHHHHHHHHHHHHh---cccCCeEEEEECCCCCCCccccccccccCHH
Confidence 00112222 333344322100000000 01234454332211 12334899999976543211 00
Q ss_pred -cccccCCCCCcEEEeCcccccccCCeecCCCCceEEcCCCCccccc-------ccCccCCcEEEEEEEeCCceEEEEEE
Q 006814 237 -INEHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSL-------IEGESKPKHVLLLEIKENQYRPTKIP 308 (630)
Q Consensus 237 -i~e~~l~~~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS~~~ts~-------~egE~~~Kgv~lleI~~~~~~~e~Ip 308 (630)
+.+-+....+|+|++||+|..... ... +..+++|||+....- ..++..+++|.+|+++++++.+++++
T Consensus 202 ~l~~~l~~~~v~~v~~GH~H~~~~~--~~~--g~~~~~~gs~~~~~~~~~~~g~~~~~~~~~gy~iv~i~~~~~~~~~v~ 277 (330)
T 3ib7_A 202 ALGRVLRGTDVRAILAGHLHYSTNA--TFV--GIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYPDTVVHSVIP 277 (330)
T ss_dssp HHHHHHTTSSEEEEEECSSSSCEEE--EET--TEEEEECCCSSCEECTTSCTTCCCEESCSCEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHhccCceEEEECCCCCcccc--eEC--CEEEEecCcceeccCCCCCCcceeccCCCCceEEEEEECCCeEEEEec
Confidence 111122347999999999997642 232 467788888853111 11134578999999999999999999
Q ss_pred CCCCC
Q 006814 309 LTSVR 313 (630)
Q Consensus 309 L~tvR 313 (630)
+....
T Consensus 278 ~~~~~ 282 (330)
T 3ib7_A 278 LGGGE 282 (330)
T ss_dssp CSCCC
T ss_pred cCCCC
Confidence 87533
No 10
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.76 E-value=5.6e-18 Score=165.65 Aligned_cols=202 Identities=16% Similarity=0.210 Sum_probs=116.3
Q ss_pred CccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccCCCccc
Q 006814 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQ 90 (630)
Q Consensus 11 ~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g~~p~~ 90 (630)
.+|||+|+||+|+++ ..|+++++.+.++++|+||++|||++...+ ...+..+++.|++
T Consensus 4 ~~mri~~iSD~H~~~------------~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~-~~~~~~~~~~l~~--------- 61 (228)
T 1uf3_A 4 TVRYILATSNPMGDL------------EALEKFVKLAPDTGADAIALIGNLMPKAAK-SRDYAAFFRILSE--------- 61 (228)
T ss_dssp CCCEEEEEECCTTCH------------HHHHHHHTHHHHHTCSEEEEESCSSCTTCC-HHHHHHHHHHHGG---------
T ss_pred ceEEEEEEeeccCCH------------HHHHHHHHHHhhcCCCEEEECCCCCCCCCC-HHHHHHHHHHHHh---------
Confidence 369999999999973 457888998888899999999999987643 3333344444432
Q ss_pred eeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhh--------CCceeEccceeecCCCc
Q 006814 91 FQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSA--------CNLVNYFGKMVLGGSGV 162 (630)
Q Consensus 91 ~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~--------~glVn~fg~~~l~~~~~ 162 (630)
.++|||+|+||||.+.. +.+.. ++.....+.
T Consensus 62 --------------------------~~~pv~~v~GNHD~~~~-------~~~~~~~~~~~~~~~~~~l~~~-------- 100 (228)
T 1uf3_A 62 --------------------------AHLPTAYVPGPQDAPIW-------EYLREAANVELVHPEMRNVHET-------- 100 (228)
T ss_dssp --------------------------GCSCEEEECCTTSCSHH-------HHHHHHHHHHHHCTTEEECBTS--------
T ss_pred --------------------------cCCcEEEECCCCCchhH-------HHHHhhhhhhccCcceEEcccc--------
Confidence 35799999999998642 12221 122211111
Q ss_pred cceeEEEEEEeeCCeeEEEEecCCCC-------hHHHHhh--hcChhHHhhcChhhhhhhcCCCceEEEEEccCCCCCCC
Q 006814 163 GEITVYPILIRKGSTAVALYGLGNIR-------DERLNRM--FQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNP 233 (630)
Q Consensus 163 ~~i~~~Pi~l~kg~~~valyGl~~i~-------derl~~~--f~~~~~v~~l~p~~~~~~~~~~~fnIlvlHq~~~~~~~ 233 (630)
.+.+ + ..+.++|+++.. ++.+.+. +......+++.. ..+..+|+++|++......
T Consensus 101 ------~~~~--~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~il~~H~p~~~~~~ 164 (228)
T 1uf3_A 101 ------FTFW--R-GPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWE-------LKDYPKIFLFHTMPYHKGL 164 (228)
T ss_dssp ------EEEE--T-TTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGG-------SCSCCEEEEESSCBCBTTT
T ss_pred ------eEee--C-CCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHHHh-------CCCCCeEEEEccCcccCCc
Confidence 1111 1 135666765321 1111000 000000122221 1234799999998643211
Q ss_pred c----cccccccC-CCCCcEEEeCcccccccCCeecCCCCceEEcCCCCcccccccCccCCcEEEEEEEeCCceEEEEEE
Q 006814 234 K----NAINEHFL-PRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIP 308 (630)
Q Consensus 234 ~----~~i~e~~l-~~~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS~~~ts~~egE~~~Kgv~lleI~~~~~~~e~Ip 308 (630)
. ..+ ..++ ...+|+|++||+|..+ ... + +..+++|||.. +.+++++++++ .++++++
T Consensus 165 ~~~~~~~~-~~~~~~~~~~~~~~GH~H~~~---~~~-~-~~~~in~Gs~~----------~~~~~i~~~~~--~~~~~~~ 226 (228)
T 1uf3_A 165 NEQGSHEV-AHLIKTHNPLLVLVAGKGQKH---EML-G-ASWVVVPGDLS----------EGEYSLLDLRA--RKLETGN 226 (228)
T ss_dssp BTTSBHHH-HHHHHHHCCSEEEECCSSCEE---EEE-T-TEEEEECCBGG----------GTEEEEEETTT--TEEEEEE
T ss_pred cccCHHHH-HHHHHHhCCCEEEEcccccCc---ccc-C-CceEEEecccC----------CCceEEEEecc--eEeeecc
Confidence 0 011 1122 2468999999999332 222 2 46889999873 45899999875 5666655
Q ss_pred C
Q 006814 309 L 309 (630)
Q Consensus 309 L 309 (630)
+
T Consensus 227 v 227 (228)
T 1uf3_A 227 V 227 (228)
T ss_dssp C
T ss_pred c
Confidence 4
No 11
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.73 E-value=2.3e-17 Score=165.44 Aligned_cols=44 Identities=9% Similarity=0.331 Sum_probs=37.9
Q ss_pred CccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC
Q 006814 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENK 66 (630)
Q Consensus 11 ~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~ 66 (630)
.+|||+|+||+|+++ ..|+++++.+.+.++|+||++|||++...
T Consensus 4 ~~mri~~iSDlH~~~------------~~~~~~l~~~~~~~~D~vi~~GDl~~~~~ 47 (260)
T 2yvt_A 4 MPRKVLAIKNFKERF------------DLLPKLKGVIAEKQPDILVVVGNILKNEA 47 (260)
T ss_dssp CCCEEEEEECCTTCG------------GGHHHHHHHHHHHCCSEEEEESCCCCCHH
T ss_pred ceEEEEEEeecCCCh------------HHHHHHHHHHHhcCCCEEEECCCCCCccC
Confidence 469999999999984 24788888888899999999999999753
No 12
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.69 E-value=3.2e-16 Score=155.29 Aligned_cols=99 Identities=19% Similarity=0.231 Sum_probs=63.6
Q ss_pred CceEEEEEccCCCCCC-CccccccccC-CCCCcEEEeCcccccccCCeecCCCCceEEcCCCCcc-cccccCccCCcEEE
Q 006814 217 DWFNILVLHQNRVKTN-PKNAINEHFL-PRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVA-TSLIEGESKPKHVL 293 (630)
Q Consensus 217 ~~fnIlvlHq~~~~~~-~~~~i~e~~l-~~~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS~~~-ts~~egE~~~Kgv~ 293 (630)
+.++|+++|+...... ....+. .++ ...+|++++||+|.+... .. .+..+++|||... ....+ ...+++|+
T Consensus 112 ~~~~i~l~Hg~~~~~~~~~~~l~-~~~~~~~~d~vl~GHtH~~~~~--~~--~~~~~inpGS~~~~~~~~~-~~~~~~y~ 185 (215)
T 2a22_A 112 GEFKIGLMHGNQVLPWDDPGSLE-QWQRRLDCDILVTGHTHKLRVF--EK--NGKLFLNPGTATGAFSALT-PDAPPSFM 185 (215)
T ss_dssp TTEEEEEECSTTSSSTTCHHHHH-HHHHHHTCSEEEECSSCCCEEE--EE--TTEEEEECCCSSCCCCTTS-TTCCCEEE
T ss_pred CCeEEEEEcCCccCCCCCHHHHH-HHHhhcCCCEEEECCcCCCccE--ee--CCEEEEECCcccccCCCCC-CCCCCcEE
Confidence 3478999997542210 001111 112 246899999999997542 22 2478999999843 22112 23468999
Q ss_pred EEEEeCCceEEEEEECCCCCcEEEEEEEe
Q 006814 294 LLEIKENQYRPTKIPLTSVRPFEYTEIIL 322 (630)
Q Consensus 294 lleI~~~~~~~e~IpL~tvRpf~~~ei~L 322 (630)
+++++++.++++.+++.. ..+.+..++.
T Consensus 186 il~i~~~~i~~~~~~~~~-~~~~v~~~~~ 213 (215)
T 2a22_A 186 LMALQGNKVVLYVYDLRD-GKTNVAMSEF 213 (215)
T ss_dssp EEEEETTEEEEEEEEEET-TEEEEEEEEE
T ss_pred EEEEeCCcEEEEEEEecC-CeEEEEEEEe
Confidence 999999999999999986 3455555543
No 13
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.68 E-value=1.8e-16 Score=154.07 Aligned_cols=73 Identities=18% Similarity=0.180 Sum_probs=51.8
Q ss_pred CCCcEEEeCcccccccCCeecCCCCceEEcCCCCcc-cccccCccCCcEEEEEEEeCCceEEEEEECCCCCcEEEEEEEe
Q 006814 244 RFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVA-TSLIEGESKPKHVLLLEIKENQYRPTKIPLTSVRPFEYTEIIL 322 (630)
Q Consensus 244 ~~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS~~~-ts~~egE~~~Kgv~lleI~~~~~~~e~IpL~tvRpf~~~ei~L 322 (630)
..+|++++||+|..... .. .+..+++|||+.. ....+ ...+++|++++++++.++++.+++...+ +....++.
T Consensus 116 ~~~d~vi~GHtH~~~~~--~~--~~~~~inpGS~~~~~~~~~-~~~~~~y~il~~~~~~~~~~~~~~~~~~-~~v~~~~~ 189 (192)
T 1z2w_A 116 FDVDILISGHTHKFEAF--EH--ENKFYINPGSATGAYNALE-TNIIPSFVLMDIQASTVVTYVYQLIGDD-VKVERIEY 189 (192)
T ss_dssp HSSSEEECCSSCCCEEE--EE--TTEEEEECCCTTCCCCSSC-SCCCCEEEEEEEETTEEEEEEEEEETTE-EEEEEEEE
T ss_pred cCCCEEEECCcCcCccE--eE--CCEEEEECCcccccCCCCC-cCCCCcEEEEEEECCEEEEEEEEccCCE-EEEEEEEE
Confidence 46899999999997542 22 3578999999843 22111 2346899999999989999999997644 44444443
No 14
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.65 E-value=2.8e-15 Score=162.79 Aligned_cols=249 Identities=19% Similarity=0.172 Sum_probs=135.4
Q ss_pred CCCCccEEEEEcCCCCCCCCC---c-----------hhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHHH
Q 006814 8 DIANTVRILVATDCHLGYMEK---D-----------EIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLV 73 (630)
Q Consensus 8 ~~~~~mKILh~SD~HLG~~~~---d-----------~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl~ 73 (630)
....+|||+|+||+|++.... + ..........|+.+++.+.+.+||+||++||+++...+ ....
T Consensus 35 ~~~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~--~~~~ 112 (443)
T 2xmo_A 35 EKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEK--TSHE 112 (443)
T ss_dssp CSCCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCCH--HHHH
T ss_pred cCCCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCH--HHHH
Confidence 345689999999999985421 0 00112357789999999999999999999999987653 2334
Q ss_pred HHHHHHHhhccCCCccceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCc------------chH--
Q 006814 74 KAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDN------------LSA-- 139 (630)
Q Consensus 74 ~~~~~Lr~l~~g~~p~~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~------------ls~-- 139 (630)
.+.+.|+.+. ..++||++|+||||....... +++
T Consensus 113 ~~~~~l~~l~--------------------------------~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~ 160 (443)
T 2xmo_A 113 ELAKKLTQVE--------------------------------KNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTD 160 (443)
T ss_dssp HHHHHHHHHH--------------------------------HTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHH
T ss_pred HHHHHHHHHH--------------------------------hCCCeEEEECCcCCCCCccccccCCcccccccccCHHH
Confidence 4555665541 236899999999998653211 001
Q ss_pred -HHhhhhCCceeEccceeecCCCccceeEEEEEEeeCCeeEEEEecCCCChH--HH------HhhhcChhHHhhcChhhh
Q 006814 140 -VDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLGNIRDE--RL------NRMFQTPHAVQWMRPEAQ 210 (630)
Q Consensus 140 -ldiL~~~glVn~fg~~~l~~~~~~~i~~~Pi~l~kg~~~valyGl~~i~de--rl------~~~f~~~~~v~~l~p~~~ 210 (630)
..++...|+...+... .... +..+. ....+.|+|++..... .. ...+. ...++|+.....
T Consensus 161 ~~~~~~~~~~~~~~~~~------~~~~---~y~~~-~~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~-~~ql~wL~~~L~ 229 (443)
T 2xmo_A 161 FSKIYSDFGYEDAISSD------EFSL---SYLAA-PSSKVWLLMLDTAIYKTNMQQGNPTTEGGLT-AGTLDWIKESSA 229 (443)
T ss_dssp HHHHTCCCCCTTCSEEC------SSSS---CEEEC-SBSSEEEEECCCBCCTTHHHHTSCCCCBCCC-HHHHHHHHHHHH
T ss_pred HHHHhhhcChhhhhccC------CCCc---eEEEe-cCCCEEEEEeeCCCcCcccccCCCCcCCccC-HHHHHHHHHHHH
Confidence 1111111111100000 0000 11111 1123555555432100 00 00000 123445533211
Q ss_pred hhhcCCCceEEEEEccCCCCCCCc---cc-cc-----cccC-CCCCcEEEeCcccccccCCee-cCCCCceEEcCCCCcc
Q 006814 211 EECQVSDWFNILVLHQNRVKTNPK---NA-IN-----EHFL-PRFLDFVVWGHEHECLIDPQE-VPGMGFHLTQPGSSVA 279 (630)
Q Consensus 211 ~~~~~~~~fnIlvlHq~~~~~~~~---~~-i~-----e~~l-~~~~DyVa~GH~H~~~i~p~~-~~~~~~~I~yPGS~~~ 279 (630)
. .+..+...|+++|++....... .+ +. ..++ ..++|+|++||+|........ ..+.+...+.+||...
T Consensus 230 ~-~~~~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~~ 308 (443)
T 2xmo_A 230 L-AKKNGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSV 308 (443)
T ss_dssp H-HHHTTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHTTCCEEEECSSCSCEEEEEECTTSCEEEEEECCCTTS
T ss_pred H-HHHcCCeEEEEECCCCcccccccccccccccHHHHHHHHHHcCCeEEEECCcccCchhhcccCCCCceEEEEcCcccc
Confidence 1 1113567899999987543210 00 10 1122 236999999999997653211 1222367788888532
Q ss_pred cccccCccCCcEEEEEEEeCCc--eEEEEEECC
Q 006814 280 TSLIEGESKPKHVLLLEIKENQ--YRPTKIPLT 310 (630)
Q Consensus 280 ts~~egE~~~Kgv~lleI~~~~--~~~e~IpL~ 310 (630)
.+.++.+++++++. ++++.+.+.
T Consensus 309 --------~p~~y~il~i~~~~~~~~~~~~~l~ 333 (443)
T 2xmo_A 309 --------FPHKYGNITYSAKNKNFTYQSQKLD 333 (443)
T ss_dssp --------TTCEEEEEEEETTTTEEEEEEEECC
T ss_pred --------CCCCeEEEEEeCCCceEEEEEEEEe
Confidence 36799999999876 666666554
No 15
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=99.61 E-value=2.8e-15 Score=144.76 Aligned_cols=52 Identities=23% Similarity=0.293 Sum_probs=42.4
Q ss_pred CCCcEEEeCcccccccCCeecCCCCceEEcCCCCcccccccCccCCcEEEEEEEeCCceEEEEEEC
Q 006814 244 RFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPL 309 (630)
Q Consensus 244 ~~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS~~~ts~~egE~~~Kgv~lleI~~~~~~~e~IpL 309 (630)
..+|++++||+|.+... .. .+..+++|||... .+|++++++++.+++++++|
T Consensus 127 ~~~d~vi~GHtH~~~~~--~~--~~~~~iNpGS~~~----------~sy~il~~~~~~~~~~~~~l 178 (178)
T 2kkn_A 127 EKPQVILFGHTHEPEDT--VK--AGVRFLNPGSLAE----------GSYAVLELDGGEVRFELKTL 178 (178)
T ss_dssp SCCSEEECCSCSSCCEE--EE--TTEEEECCCCTTT----------TEEEEEEEETTEEEEEEEEC
T ss_pred cCCCEEEECccCCCCeE--Ee--CCEEEEECCCCCC----------CeEEEEEECCCEEEEEEEeC
Confidence 56899999999997642 22 2578999999742 78999999998899998876
No 16
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.58 E-value=7.2e-15 Score=143.28 Aligned_cols=162 Identities=18% Similarity=0.289 Sum_probs=102.8
Q ss_pred ccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccCCCccce
Q 006814 12 TVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQF 91 (630)
Q Consensus 12 ~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g~~p~~~ 91 (630)
||||+++||+|.. +.+|+++++.+.+.++|+|+++||+++ | .+++.|++
T Consensus 25 ~m~i~~iSD~Hg~------------~~~l~~~l~~~~~~~~D~ii~~GDl~~---~------~~~~~l~~---------- 73 (190)
T 1s3l_A 25 HMKIGIMSDTHDH------------LPNIRKAIEIFNDENVETVIHCGDFVS---L------FVIKEFEN---------- 73 (190)
T ss_dssp -CEEEEECCCTTC------------HHHHHHHHHHHHHSCCSEEEECSCCCS---T------HHHHHGGG----------
T ss_pred CeEEEEEeeCCCC------------HHHHHHHHHHHhhcCCCEEEECCCCCC---H------HHHHHHHh----------
Confidence 5999999999932 457889999988899999999999996 2 23444432
Q ss_pred eeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhhCCceeEccceeecCCCccceeEEEEE
Q 006814 92 QVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPIL 171 (630)
Q Consensus 92 ~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~~glVn~fg~~~l~~~~~~~i~~~Pi~ 171 (630)
.++||++|+||||.... ....+ |... +++.+
T Consensus 74 -------------------------l~~~~~~V~GNhD~~~~----~~~~~---------~~~~-----~~~~l------ 104 (190)
T 1s3l_A 74 -------------------------LNANIIATYGNNDGERC----KLKEW---------LKDI-----NEENI------ 104 (190)
T ss_dssp -------------------------CSSEEEEECCTTCCCHH----HHHHH---------HHHH-----CTTCE------
T ss_pred -------------------------cCCCEEEEeCCCcchHH----HHHHH---------hccc-----Chhhh------
Confidence 25799999999997531 00011 1110 00000
Q ss_pred EeeCCeeEEEEecCCCChHHHHhhhcChhHHhhcChhhhhhhcCCCceEEEEEccCCCCCCCccccccccCCC-CCcEEE
Q 006814 172 IRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPR-FLDFVV 250 (630)
Q Consensus 172 l~kg~~~valyGl~~i~derl~~~f~~~~~v~~l~p~~~~~~~~~~~fnIlvlHq~~~~~~~~~~i~e~~l~~-~~DyVa 250 (630)
...+ ..+. .+.++|+++|++... +.+.+... .+|+++
T Consensus 105 ----------~~~~-----------------~~~~---------~~~~~ill~Hg~~~~------l~~~~~~~~~~d~vl 142 (190)
T 1s3l_A 105 ----------IDDF-----------------ISVE---------IDDLKFFITHGHHQS------VLEMAIKSGLYDVVI 142 (190)
T ss_dssp ----------EESE-----------------EEEE---------ETTEEEEEEESCCHH------HHHHHHHHSCCSEEE
T ss_pred ----------cccc-----------------eEEe---------eCCcEEEEECCChHH------HHHHHHhcCCCCEEE
Confidence 0000 0000 135799999986321 22222223 699999
Q ss_pred eCcccccccCCeecCCCCceEEcCCCCcccccccCccCCcEEEEEEEeCCceEE
Q 006814 251 WGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRP 304 (630)
Q Consensus 251 ~GH~H~~~i~p~~~~~~~~~I~yPGS~~~ts~~egE~~~Kgv~lleI~~~~~~~ 304 (630)
+||+|.+++. .. .+..+++|||... . . ..+.+|++++++++.+++
T Consensus 143 ~GHtH~~~~~--~~--~~~~~iNpGs~~~--r-~--~~~~~y~il~~~~~~v~~ 187 (190)
T 1s3l_A 143 YGHTHERVFE--EV--DDVLVINPGECCG--Y-L--TGIPTIGILDTEKKEYRE 187 (190)
T ss_dssp EECSSCCEEE--EE--TTEEEEECCCSSC--T-T--TSCCEEEEEETTTTEEEE
T ss_pred ECCCCCcceE--EE--CCEEEEECCcccc--c-C--CCCCEEEEEEcCCCcEEE
Confidence 9999997653 22 2578999999865 2 1 246899999998765443
No 17
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.55 E-value=4.8e-14 Score=144.05 Aligned_cols=87 Identities=17% Similarity=0.195 Sum_probs=63.3
Q ss_pred CCccEEEEEcCCCCCCCCCch-------hchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCC----ChHHHHHHHHH
Q 006814 10 ANTVRILVATDCHLGYMEKDE-------IRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKP----SRSTLVKAIEI 78 (630)
Q Consensus 10 ~~~mKILh~SD~HLG~~~~d~-------~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~P----s~~tl~~~~~~ 78 (630)
...|||+|+||+|++...... ....+....++++++.+.+.++|+||++|||++...+ ....+..+++.
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~ 82 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAE 82 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHH
Confidence 356999999999999753211 2234567789999999988999999999999987431 12333444444
Q ss_pred HHhhccCCCccceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 006814 79 LRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (630)
Q Consensus 79 Lr~l~~g~~p~~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p 131 (630)
|++ .++||++|+||||..
T Consensus 83 l~~-----------------------------------~~~p~~~v~GNHD~~ 100 (322)
T 2nxf_A 83 LDA-----------------------------------CSVDVHHVWGNHEFY 100 (322)
T ss_dssp HHT-----------------------------------TCSEEEECCCHHHHH
T ss_pred HHh-----------------------------------cCCcEEEecCCCCcc
Confidence 432 367999999999973
No 18
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=99.51 E-value=3.9e-13 Score=137.01 Aligned_cols=257 Identities=15% Similarity=0.176 Sum_probs=130.1
Q ss_pred CCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccCCCcc
Q 006814 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPV 89 (630)
Q Consensus 10 ~~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g~~p~ 89 (630)
.+.|||+|+||+|++....-. ........+.+.+.+.+.++|+||++||++.........-....+.+.++
T Consensus 4 ~~~~~~~~isD~h~~~~~~~~--~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~------- 74 (313)
T 1ute_A 4 TPILRFVAVGDWGGVPNAPFH--TAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDV------- 74 (313)
T ss_dssp CCCEEEEEECSCCCCSSTTSS--CHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTT-------
T ss_pred CCceEEEEEcccCCCCCcccc--CchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHH-------
Confidence 467999999999998532100 01112233444455667899999999999765321110001222233221
Q ss_pred ceeeechhhhhcccccCccccCCCCCCC-CCcEEEEcCCCCCCCCCCcchHHHhhhhCCceeEccceeecCCCccceeEE
Q 006814 90 QFQVVSDQAVNFQNKFGHVNYEDPHFNV-GLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVY 168 (630)
Q Consensus 90 ~~~~lsd~~~~f~~~~~~lny~d~n~~~-~iPVf~I~GNHD~p~~~~~ls~ldiL~~~glVn~fg~~~l~~~~~~~i~~~ 168 (630)
+.. ... ++|+++|+||||...... ..+.......... +.. ......+
T Consensus 75 ---------------~~~-------~~l~~~p~~~v~GNHD~~~~~~--~~~~~~~~~~~~~-~~~------~~y~~~~- 122 (313)
T 1ute_A 75 ---------------FSD-------PSLRNVPWHVLAGNHDHLGNVS--AQIAYSKISKRWN-FPS------PYYRLRF- 122 (313)
T ss_dssp ---------------SCS-------GGGTTCCEEECCCHHHHHSCHH--HHHHGGGTSTTEE-CCS------SSEEEEE-
T ss_pred ---------------cCc-------hhhcCCCEEEECCCCccCCCcc--ccccccccCCCcc-Ccc------cceEEEE-
Confidence 000 013 689999999999754211 1111111100000 000 0000000
Q ss_pred EEEEeeCCeeEEEEecCCCC-----------------hHHHHhhhcChhHHhhcChhhhhhhcCCCceEEEEEccCCCCC
Q 006814 169 PILIRKGSTAVALYGLGNIR-----------------DERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKT 231 (630)
Q Consensus 169 Pi~l~kg~~~valyGl~~i~-----------------derl~~~f~~~~~v~~l~p~~~~~~~~~~~fnIlvlHq~~~~~ 231 (630)
.+..++..+.+++|.... ...+. ...++|+...... .....+|+++|.+....
T Consensus 123 --~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~-----~~q~~wL~~~L~~---~~~~~~iv~~H~p~~~~ 192 (313)
T 1ute_A 123 --KIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALA-----RTQLAWIKKQLAA---AKEDYVLVAGHYPVWSI 192 (313)
T ss_dssp --ECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCSCSCHHHH-----HHHHHHHHHHHHH---CCCSEEEEECSSCSSCC
T ss_pred --ecCCCCceEEEEEEEChHHhCcCccccccccCCccccchH-----HHHHHHHHHHHHh---CCCCeEEEEECCCCccC
Confidence 001112356666664211 01111 1345666543221 23467999999987653
Q ss_pred CCc---cccccc---cC-CCCCcEEEeCcccccccCCeecCCCCceEEcCCCCccccc---------------ccCc-cC
Q 006814 232 NPK---NAINEH---FL-PRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSL---------------IEGE-SK 288 (630)
Q Consensus 232 ~~~---~~i~e~---~l-~~~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS~~~ts~---------------~egE-~~ 288 (630)
... ..+... ++ ...+|+|++||+|..... . ...+..++.+||.-...- ..++ ..
T Consensus 193 ~~~~~~~~~~~~l~~~l~~~~v~~~l~GH~H~~~~~--~-~~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (313)
T 1ute_A 193 AEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYL--Q-DENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENS 269 (313)
T ss_dssp SSSCCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEE--E-CTTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTS
T ss_pred CCCCCcHHHHHHHHHHHHHcCCcEEEECChhhhhhc--c-CCCCceEEEECCCcCcCccccccccCCCcccceeccCcCC
Confidence 221 111111 12 246999999999975432 1 123456777887642211 0011 12
Q ss_pred CcEEEEEEEeCCceEEEEEECCCCCcEEEEEEEee
Q 006814 289 PKHVLLLEIKENQYRPTKIPLTSVRPFEYTEIILK 323 (630)
Q Consensus 289 ~Kgv~lleI~~~~~~~e~IpL~tvRpf~~~ei~L~ 323 (630)
..||.+|+++++.+.++++.+. -+++. ++.|.
T Consensus 270 ~~gy~~l~v~~~~~~~~~~~~~-g~~~~--~~~l~ 301 (313)
T 1ute_A 270 LGGFAYVEITPKEMSVTYIEAS-GKSLF--KTKLP 301 (313)
T ss_dssp CCEEEEEEECSSCEEEEEEETT-SCEEE--EEEEC
T ss_pred CCceEEEEEEcCEEEEEEEcCC-CcEEE--EEEec
Confidence 3799999999989999999985 46544 44444
No 19
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=99.48 E-value=9.6e-13 Score=129.80 Aligned_cols=176 Identities=18% Similarity=0.253 Sum_probs=108.2
Q ss_pred CCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCC--hH--HHHHHHHHHHhhccC
Q 006814 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPS--RS--TLVKAIEILRRHCLN 85 (630)
Q Consensus 10 ~~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps--~~--tl~~~~~~Lr~l~~g 85 (630)
..||||+++||+|++ +..|+++++.+.+.++|+|+++||+++..... .. ....++++|+++
T Consensus 23 ~~mmki~~iSD~H~~------------~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~--- 87 (208)
T 1su1_A 23 NAMMKLMFASDIHGS------------LPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEV--- 87 (208)
T ss_dssp --CCEEEEECCCTTB------------HHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT---
T ss_pred cccEEEEEEEcCCCC------------HHHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhc---
Confidence 447999999999975 35788899988888999999999999864211 00 123466666643
Q ss_pred CCccceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhhCCceeEccceeecCCCccce
Q 006814 86 DRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEI 165 (630)
Q Consensus 86 ~~p~~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~~glVn~fg~~~l~~~~~~~i 165 (630)
++||++|.||||... ..++.. |...
T Consensus 88 --------------------------------~~~v~~V~GNHD~~~-------~~~~~~------~~~~---------- 112 (208)
T 1su1_A 88 --------------------------------AHKVIAVRGNCDSEV-------DQMLLH------FPIT---------- 112 (208)
T ss_dssp --------------------------------GGGEEECCCTTCCHH-------HHHHSS------SCCC----------
T ss_pred --------------------------------CCceEEEECCCchHH-------HHhhhh------cccc----------
Confidence 369999999999632 011110 1000
Q ss_pred eEEEEEEeeCCeeEEEEecCCCChHHHHhhhcChhHHhhcChhhhhhhcCCCceEEEEEccCCCCCCCccccccccCCCC
Q 006814 166 TVYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRF 245 (630)
Q Consensus 166 ~~~Pi~l~kg~~~valyGl~~i~derl~~~f~~~~~v~~l~p~~~~~~~~~~~fnIlvlHq~~~~~~~~~~i~e~~l~~~ 245 (630)
+ . .. ++. -+..+|+++|+..... ..++ . +. .
T Consensus 113 ---~------~--~~-----------------------~~~---------~~g~~i~l~Hg~~~~~---~~l~-~-~~-~ 143 (208)
T 1su1_A 113 ---A------P--WQ-----------------------QVL---------LEKQRLFLTHGHLFGP---ENLP-A-LN-Q 143 (208)
T ss_dssp ---C------S--EE-----------------------EEE---------CSSCEEEEECSSSSBT---TBCC-C-CC-T
T ss_pred ---C------c--eE-----------------------EEE---------ECCcEEEEECCCCCCc---chhh-h-hc-C
Confidence 0 0 00 000 1346899999875421 1111 1 12 3
Q ss_pred CcEEEeCcccccccCCeecCCCCceEEcCCCCcccccccCccCCcEEEEEEEeCCceEEEEEECCCCCcEEE
Q 006814 246 LDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPLTSVRPFEY 317 (630)
Q Consensus 246 ~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS~~~ts~~egE~~~Kgv~lleI~~~~~~~e~IpL~tvRpf~~ 317 (630)
.|++++||+|.+... .. .+..+++|||...-. ...+.+|++++. + .++.+.+.. .++..
T Consensus 144 ~d~vi~GHtH~~~~~--~~--~~~~~iNpGs~~~pr----~~~~~sy~il~~--~--~~~~~~~~~-~~~~~ 202 (208)
T 1su1_A 144 NDVLVYGHTHLPVAE--QR--GEIFHFNPGSVSIPK----GGNPASYGMLDN--D--VLSVIALND-QSIIA 202 (208)
T ss_dssp TCEEECCSSCCCEEE--EE--TTEEEEECCCSSCCC----TTCCCEEEEEET--T--EEEEEETTT-CCEEE
T ss_pred CCEEEECCcccCccE--Ee--CCEEEEECCCCcCCC----CCCCCEEEEEEC--C--eEEEEEeCC-CEEEE
Confidence 499999999997642 22 247899999975321 123678999984 3 466677753 35543
No 20
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.46 E-value=8.6e-13 Score=135.36 Aligned_cols=215 Identities=18% Similarity=0.199 Sum_probs=114.1
Q ss_pred CCCCCCCCCCCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHHHHHHHHHH
Q 006814 1 MGQQPREDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILR 80 (630)
Q Consensus 1 ~~~~~~~~~~~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr 80 (630)
||.++. ...+++||+++||+|.. +.+|+++++.+...++|.|+++|||++....+. .++++|+
T Consensus 1 ~~~~~~-~~~~~~~i~~iSDiHg~------------~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~~----~~~~~l~ 63 (270)
T 3qfm_A 1 MGHHHH-HHMDMTKIALLSDIHGN------------TTALEAVLADARQLGVDEYWLLGDILMPGTGRR----RILDLLD 63 (270)
T ss_dssp -----------CEEEEEECCCTTC------------HHHHHHHHHHHHHTTCCEEEECSCCSSSSSCSH----HHHHHHH
T ss_pred CCcccc-ccccccEEEEEecCCCC------------HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHH----HHHHHHH
Confidence 344333 45789999999999954 467899999999999999999999998653232 4566666
Q ss_pred hhccCCCccceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhhCCceeEccceeecCC
Q 006814 81 RHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGS 160 (630)
Q Consensus 81 ~l~~g~~p~~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~~glVn~fg~~~l~~~ 160 (630)
++ -|+++|.||||.... ..+.. .. .|....
T Consensus 64 ~~------------------------------------~~~~~v~GNhD~~~~-------~~~~~--~~-~~~~~~---- 93 (270)
T 3qfm_A 64 QL------------------------------------PITARVLGNWEDSLW-------HGVRK--EL-DSTRPS---- 93 (270)
T ss_dssp TS------------------------------------CEEEECCCHHHHHHH-------HHHTT--CS-CTTSHH----
T ss_pred cc------------------------------------CCEEEEcCChHHHHH-------Hhhcc--cc-CCCcHH----
Confidence 42 279999999996321 11100 00 000000
Q ss_pred CccceeEEEEEEeeCCeeEEEEecCCCChHHHHhhhcChhHHhhcC--hhhhhhhcCCCceEEEEEccCCCCCCCcccc-
Q 006814 161 GVGEITVYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMR--PEAQEECQVSDWFNILVLHQNRVKTNPKNAI- 237 (630)
Q Consensus 161 ~~~~i~~~Pi~l~kg~~~valyGl~~i~derl~~~f~~~~~v~~l~--p~~~~~~~~~~~fnIlvlHq~~~~~~~~~~i- 237 (630)
... +. ...-|-.....++ .++|+. |.... -.-+.+.|+++|+...... ..++
T Consensus 94 ---~~~-----~~----~~~~~~~~~L~~~----------~~~~L~~LP~~~~--~~~~g~~i~lvHg~p~~~~-~~~~~ 148 (270)
T 3qfm_A 94 ---QRY-----LL----RQCQYVLEEISLE----------EIEVLHNQPLQIH--RQFGDLTVGISHHLPDKNW-GRELI 148 (270)
T ss_dssp ---HHH-----HH----HHHHHHHTTSCHH----------HHHHHHSCCSEEE--EEETTEEEEEESSBTTBSS-SSTTS
T ss_pred ---HHH-----HH----HHHHHHHHHcCHH----------HHHHHHhCCCceE--EEECCcEEEEEECCCCCCC-Cceec
Confidence 000 00 0000001111122 223332 21100 0114578999997532210 0111
Q ss_pred c-------cccC-CCCCcEEEeCcccccccCCeecCCCCceEEcCCCCcccccccC---ccCCcEEEEEEEeCCc-eEEE
Q 006814 238 N-------EHFL-PRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEG---ESKPKHVLLLEIKENQ-YRPT 305 (630)
Q Consensus 238 ~-------e~~l-~~~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS~~~ts~~eg---E~~~Kgv~lleI~~~~-~~~e 305 (630)
+ ..++ ...+|++++||+|.+... .. ..+..+++|||.-.-..... ......|+|+++++++ ++++
T Consensus 149 ~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~--~~-~~~~~~iNpGSvg~pr~~~~~~~~~~~asyaild~~~~~~~~v~ 225 (270)
T 3qfm_A 149 HTGKQEEFDRLVTHPPCDIAVYGHIHQQLLR--YG-TGGQLIVNPGSIGQPFFLDAQLRKDLRAQYMILEFDDKGLVDMD 225 (270)
T ss_dssp TTCCHHHHHHTTTTTTCSEEECCSSCSEEEE--EC-TTSCEEEEECCSSSCCCSSTTGGGCCCEEEEEEEEETTEEEEEE
T ss_pred CCCcHHHHHHHhcccCCCEEEECCcCchHhe--ec-cCCEEEEECCCccCCCCCCccccCCCCCEEEEEEecCCCceEEE
Confidence 0 1122 357999999999986532 22 23578999999843221100 0125689999998875 5677
Q ss_pred EEECC
Q 006814 306 KIPLT 310 (630)
Q Consensus 306 ~IpL~ 310 (630)
++.+.
T Consensus 226 ~~rv~ 230 (270)
T 3qfm_A 226 FRRVD 230 (270)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 66543
No 21
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.43 E-value=7.3e-13 Score=126.63 Aligned_cols=89 Identities=12% Similarity=0.075 Sum_probs=57.3
Q ss_pred eEEEEEccCCCCCC-CccccccccCCCCCcEEEeCcccccccCCeecCCCCceEEcCCCCcccccccCccCC-cEEEEEE
Q 006814 219 FNILVLHQNRVKTN-PKNAINEHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKP-KHVLLLE 296 (630)
Q Consensus 219 fnIlvlHq~~~~~~-~~~~i~e~~l~~~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS~~~ts~~egE~~~-Kgv~lle 296 (630)
.+|+++|++..... ....+.+.+....+|++++||+|..... .. .+..+++|||..... + ..+ .+|++++
T Consensus 78 ~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~d~vi~GHtH~~~~~--~~--~~~~~inpGs~~~~~--~--~~~~~~y~il~ 149 (176)
T 3ck2_A 78 TKIIQTHGHLFDINFNFQKLDYWAQEEEAAICLYGHLHVPSAW--LE--GKILFLNPGSISQPR--G--TIRECLYARVE 149 (176)
T ss_dssp EEEEEECSGGGTTTTCSHHHHHHHHHTTCSEEECCSSCCEEEE--EE--TTEEEEEECCSSSCC--T--TCCSCCEEEEE
T ss_pred eEEEEECCCccCCCCCHHHHHHHHHhcCCCEEEECCcCCCCcE--EE--CCEEEEECCCCCcCC--C--CCCCCeEEEEE
Confidence 57888887643211 1111111122356899999999997642 22 246899999975321 1 234 7899999
Q ss_pred EeCCceEEEEEECCCCCcEE
Q 006814 297 IKENQYRPTKIPLTSVRPFE 316 (630)
Q Consensus 297 I~~~~~~~e~IpL~tvRpf~ 316 (630)
++++.++++.+++.. +++.
T Consensus 150 ~~~~~~~v~~~~~~~-~~~~ 168 (176)
T 3ck2_A 150 IDDSYFKVDFLTRDH-EVYP 168 (176)
T ss_dssp ECSSEEEEEEECTTS-CBCT
T ss_pred EcCCEEEEEEEEECC-EEcc
Confidence 998889999999873 4443
No 22
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.40 E-value=1.1e-12 Score=131.56 Aligned_cols=71 Identities=20% Similarity=0.204 Sum_probs=52.4
Q ss_pred ccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHH---hc--CCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccCC
Q 006814 12 TVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAE---QK--EVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLND 86 (630)
Q Consensus 12 ~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~---~~--~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g~ 86 (630)
||||+++||+|.. +..|+++++.+. .. ++|+|+++|||++.. |... .++++|+++.
T Consensus 1 mm~i~~isD~H~~------------~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g-~~~~---~~~~~l~~l~--- 61 (252)
T 1nnw_A 1 MVYVAVLANIAGN------------LPALTAALSRIEEMREEGYEIEKYYILGNIVGLF-PYPK---EVIEVIKDLT--- 61 (252)
T ss_dssp -CEEEEEECCTTC------------HHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSS-SCHH---HHHHHHHHHH---
T ss_pred CcEEEEEeecCCC------------HHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCC-CCHH---HHHHHHHhhH---
Confidence 6999999999964 346778887777 76 899999999999865 3322 3555666541
Q ss_pred CccceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 006814 87 RPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (630)
Q Consensus 87 ~p~~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p 131 (630)
...||++|+||||..
T Consensus 62 ------------------------------~~~~~~~v~GNhD~~ 76 (252)
T 1nnw_A 62 ------------------------------KKENVKIIRGKYDQI 76 (252)
T ss_dssp ------------------------------HHSCEEEECCHHHHH
T ss_pred ------------------------------hhcCeeEEecchHHH
Confidence 125799999999964
No 23
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.31 E-value=2.5e-12 Score=129.39 Aligned_cols=54 Identities=31% Similarity=0.449 Sum_probs=40.8
Q ss_pred CccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHHHHHHHHHHhh
Q 006814 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRH 82 (630)
Q Consensus 11 ~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l 82 (630)
++|||+++||+|.. +.+|+++++.+. ++|.|+++|||++.. |... .+++.|+.+
T Consensus 2 ~~mri~~isDiHg~------------~~~l~~~l~~~~--~~d~ii~~GDl~~~g-~~~~---~~~~~l~~~ 55 (246)
T 3rqz_A 2 NAMRILIISDVHAN------------LVALEAVLSDAG--RVDDIWSLGDIVGYG-PRPR---ECVELVRVL 55 (246)
T ss_dssp CCCCEEEECCCTTC------------HHHHHHHHHHHC--SCSEEEECSCCSSSS-SCHH---HHHHHHHHH
T ss_pred CCcEEEEEeecCCC------------HHHHHHHHHhcc--CCCEEEECCCcCCCC-CCHH---HHHHHHHhc
Confidence 67999999999943 356778887765 899999999999865 3322 456666654
No 24
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.30 E-value=1.4e-11 Score=128.34 Aligned_cols=70 Identities=20% Similarity=0.096 Sum_probs=52.4
Q ss_pred CCCCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccCCC
Q 006814 8 DIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDR 87 (630)
Q Consensus 8 ~~~~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g~~ 87 (630)
...+.|||+++||+|..... + .-.++|+||++|||++... ...+..++++|+++
T Consensus 55 ~~~~~mri~~iSD~H~~~~~------------l-------~i~~~D~vi~aGDl~~~g~--~~e~~~~~~~L~~l----- 108 (296)
T 3rl5_A 55 KPAGHTRFVCISDTRSRTDG------------I-------QMPYGDILLHTGDFTELGL--PSEVKKFNDWLGNL----- 108 (296)
T ss_dssp CCTTEEEEEEEBCCTTCCTT------------C-------CCCSCSEEEECSCCSSSCC--HHHHHHHHHHHHTS-----
T ss_pred CCCCCeEEEEEeeCCCCcch------------h-------ccCCCCEEEECCcccCCCC--HHHHHHHHHHHHhC-----
Confidence 45678999999999998532 1 1147999999999999764 44566677777653
Q ss_pred ccceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCC
Q 006814 88 PVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPA 132 (630)
Q Consensus 88 p~~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~ 132 (630)
...++|+|+||||...
T Consensus 109 -----------------------------~~~~v~~V~GNHD~~~ 124 (296)
T 3rl5_A 109 -----------------------------PYEYKIVIAGNHELTF 124 (296)
T ss_dssp -----------------------------CCSEEEECCCTTCGGG
T ss_pred -----------------------------CCCeEEEEcCCccccc
Confidence 1246999999999753
No 25
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=99.22 E-value=1e-10 Score=124.16 Aligned_cols=260 Identities=12% Similarity=0.063 Sum_probs=131.4
Q ss_pred CccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccCCCccc
Q 006814 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQ 90 (630)
Q Consensus 11 ~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g~~p~~ 90 (630)
..+||++++|+|.|+.. .....+.+.+.+.++++||||++||+|+....+.. -.+..+.+.+.
T Consensus 2 ~~l~f~~igD~g~g~~~--------q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~-d~~~~~~f~~~-------- 64 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKG--------QILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLN-DPAWKNLYEDV-------- 64 (342)
T ss_dssp CCEEEEECCSCBSCCHH--------HHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTT-CTHHHHHTTTT--------
T ss_pred ceEEEEEEecCCCCCch--------HHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCc-cHHHHHHHHHH--------
Confidence 36899999999998532 23455677888889999999999999987332211 01122222221
Q ss_pred eeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhh---CCc---------ee-Eccceee
Q 006814 91 FQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSA---CNL---------VN-YFGKMVL 157 (630)
Q Consensus 91 ~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~---~gl---------Vn-~fg~~~l 157 (630)
+. .++...++|+|+|.||||..... ...++.-.. .+- .. ...+..+
T Consensus 65 --------------~~-----~~~~~~~~P~~~vlGNHD~~~~~--~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~ 123 (342)
T 3tgh_A 65 --------------YS-----EEKGDMYMPFFTVLGTRDWTGNY--NAQLLKGQGIYIEKNGETSIEKDADATNYPKWIM 123 (342)
T ss_dssp --------------SC-----CGGGTTCSEEEECCCHHHHTSCH--HHHHHHHHC---------------CCCSSCEEEC
T ss_pred --------------hh-----hhhhhhCCCEEEeCCCCccCCCc--hHhhhhhhcccccccccccccccccccCCCCccC
Confidence 11 11113579999999999986431 111111110 000 00 0011111
Q ss_pred cCCCccce----eE--EEEEEeeC--CeeEEEEecCCCCh-------HHHHhhhcChhHHhhcChhhhhhhcCCCceEEE
Q 006814 158 GGSGVGEI----TV--YPILIRKG--STAVALYGLGNIRD-------ERLNRMFQTPHAVQWMRPEAQEECQVSDWFNIL 222 (630)
Q Consensus 158 ~~~~~~~i----~~--~Pi~l~kg--~~~valyGl~~i~d-------erl~~~f~~~~~v~~l~p~~~~~~~~~~~fnIl 222 (630)
++ -+..+ .+ .|+....| +..+.++.|....- ..-..... ...+||..... ...+.|+
T Consensus 124 P~-~yY~~~~~f~~~~~~~~~~~g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~--~Ql~WLe~~L~-----~~~~~IV 195 (342)
T 3tgh_A 124 PN-YWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWN--DLKSQLSVAKK-----IADFIIV 195 (342)
T ss_dssp SS-SSEEEEEEEEEC---------CEEEEEEEEECCTTTTSTTCSCHHHHHHHHH--HHHHHHHHHHH-----HCSEEEE
T ss_pred Cc-ceEEEEEEeeccccccccccCCCCceEEEEEEeCcccccCCcccccchHHHH--HHHHHHHHhhc-----cCCcEEE
Confidence 11 00100 00 01111122 23566676654210 00111111 35667755431 2357899
Q ss_pred EEccCCCCCCCc---cccccc---cC-CCCCcEEEeCcccccccCCeecCCCCceEEcCCCCcc-cc--cccC-----cc
Q 006814 223 VLHQNRVKTNPK---NAINEH---FL-PRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVA-TS--LIEG-----ES 287 (630)
Q Consensus 223 vlHq~~~~~~~~---~~i~e~---~l-~~~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS~~~-ts--~~eg-----E~ 287 (630)
+.|.+....+.. ..+... +| ..++|++++||.|..+.. ... +...+..|+.-. .. .... ..
T Consensus 196 ~~HhP~~~~~~~~~~~~l~~~l~~ll~~~~VdlvlsGH~H~~~~~--~~~--g~~~iv~Ga~g~~~~~~~~~~~~s~f~~ 271 (342)
T 3tgh_A 196 VGDQPIYSSGYSRGSSYLAYYLLPLLKDAEVDLYISGHDNNMEVI--EDN--DMAHITCGSGSMSQGKSGMKNSKSLFFS 271 (342)
T ss_dssp ECSSCSSCSSTTCCCHHHHHHTHHHHHHTTCCEEEECSSSSEEEE--EET--TEEEEEECCSSCCCCCCSSCCTTEEEEE
T ss_pred EECCCCCCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCcceeEE--eeC--CcEEEEeCccccccccCCCCCCcceeec
Confidence 999997653321 111111 22 257999999999987532 112 233333333211 10 0000 02
Q ss_pred CCcEEEEEEEeCCceEEEEEECCCCCcEEEEEE
Q 006814 288 KPKHVLLLEIKENQYRPTKIPLTSVRPFEYTEI 320 (630)
Q Consensus 288 ~~Kgv~lleI~~~~~~~e~IpL~tvRpf~~~ei 320 (630)
.+.|+.++++.++.+.++.+....-+.+...+|
T Consensus 272 ~~~Gf~~l~v~~~~l~~~~~~~~~G~vld~~~i 304 (342)
T 3tgh_A 272 SDIGFCVHELSNNGIVTKFVSSKKGEVIYTHKL 304 (342)
T ss_dssp CSSEEEEEEEETTEEEEEEEETTTTEEEEEEEE
T ss_pred CCCcEEEEEEECCEEEEEEEECCCCcEEEEEEE
Confidence 578999999999999999998444565443333
No 26
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=99.19 E-value=1.7e-11 Score=118.91 Aligned_cols=81 Identities=15% Similarity=0.049 Sum_probs=54.5
Q ss_pred ccEEEEEcCCCCCCCCCchhch-hcHHHHHHHHHHHHHh--cCCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccCCCc
Q 006814 12 TVRILVATDCHLGYMEKDEIRR-HDSFEAFEEICSIAEQ--KEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRP 88 (630)
Q Consensus 12 ~mKILh~SD~HLG~~~~d~~r~-~Ds~~tFeeil~~A~~--~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g~~p 88 (630)
.|||+++||+|+|.......+. .+....++.+++.+.+ .++|+|+++||+++.. +... .++++|+++
T Consensus 1 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~-~~~~---~~~~~l~~l------ 70 (195)
T 1xm7_A 1 NAMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF-NDKN---EYLRIWKAL------ 70 (195)
T ss_dssp CCCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS-CCTT---SHHHHHHHS------
T ss_pred CcEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc-hhHH---HHHHHHHHC------
Confidence 4899999999999753111110 1111235666777776 4899999999999874 3322 355666653
Q ss_pred cceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 006814 89 VQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (630)
Q Consensus 89 ~~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p 131 (630)
..|+++|+||||..
T Consensus 71 -----------------------------~~~~~~v~GNhD~~ 84 (195)
T 1xm7_A 71 -----------------------------PGRKILVMGNHDKD 84 (195)
T ss_dssp -----------------------------SSEEEEECCTTCCC
T ss_pred -----------------------------CCCEEEEeCCCCCc
Confidence 24899999999974
No 27
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=99.03 E-value=5.4e-09 Score=113.20 Aligned_cols=78 Identities=19% Similarity=0.015 Sum_probs=51.8
Q ss_pred CCCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhc--CCCEEEEcCCCCCCCCCC---hHHHHHHHHHHHhhc
Q 006814 9 IANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK--EVDFVLLGGDLFHENKPS---RSTLVKAIEILRRHC 83 (630)
Q Consensus 9 ~~~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~--~VD~VLlaGDLFd~~~Ps---~~tl~~~~~~Lr~l~ 83 (630)
....+||++++|+|.++. ...++ +.+.+. ++|+||++||++...... ......+.+.|+.+
T Consensus 123 ~~~~~~f~~~gD~~~~~~---------~~~~l----~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l- 188 (426)
T 1xzw_A 123 PDVPYVFGLIGDIGQTHD---------SNTTL----THYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERS- 188 (426)
T ss_dssp TTCCEEEEEECSCTTBHH---------HHHHH----HHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHH-
T ss_pred CCCCeEEEEEEeCCCCCc---------hHHHH----HHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHH-
Confidence 467899999999998731 12333 333444 899999999999754321 22222334444443
Q ss_pred cCCCccceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCC
Q 006814 84 LNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPA 132 (630)
Q Consensus 84 ~g~~p~~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~ 132 (630)
...+|++++.||||...
T Consensus 189 --------------------------------~~~~P~~~v~GNHD~~~ 205 (426)
T 1xzw_A 189 --------------------------------VAYQPWIWTAGNHEIDY 205 (426)
T ss_dssp --------------------------------HTTSCEECCCCGGGCCC
T ss_pred --------------------------------HhcCCEEEecccccccc
Confidence 24689999999999864
No 28
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=98.98 E-value=3.9e-09 Score=114.15 Aligned_cols=78 Identities=18% Similarity=0.040 Sum_probs=51.5
Q ss_pred CCCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhc--CCCEEEEcCCCCCCCCCC---hHHHHHHHHHHHhhc
Q 006814 9 IANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK--EVDFVLLGGDLFHENKPS---RSTLVKAIEILRRHC 83 (630)
Q Consensus 9 ~~~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~--~VD~VLlaGDLFd~~~Ps---~~tl~~~~~~Lr~l~ 83 (630)
....|||++++|+|+++. ... +++.+.+. ++|+||++||+++..... ........++++.+
T Consensus 116 ~~~~~~f~~igD~~~~~~---------~~~----~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~- 181 (424)
T 2qfp_A 116 LDVPYTFGLIGDLGQSFD---------SNT----TLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERS- 181 (424)
T ss_dssp TTCCEEEEEECSCTTBHH---------HHH----HHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHH-
T ss_pred CCCCeEEEEEEeCCCCCC---------hHH----HHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHH-
Confidence 457899999999999741 122 33444444 899999999999864321 11222333444432
Q ss_pred cCCCccceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCC
Q 006814 84 LNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPA 132 (630)
Q Consensus 84 ~g~~p~~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~ 132 (630)
...+|++++.||||...
T Consensus 182 --------------------------------~~~~P~~~v~GNHD~~~ 198 (424)
T 2qfp_A 182 --------------------------------VAYQPWIWTAGNHEIEF 198 (424)
T ss_dssp --------------------------------HTTSCEEECCCHHHHCC
T ss_pred --------------------------------HhcCCeEeecCCccccc
Confidence 23589999999999753
No 29
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=98.81 E-value=1.6e-08 Score=112.60 Aligned_cols=217 Identities=18% Similarity=0.209 Sum_probs=110.4
Q ss_pred CccEEEEEcCCCCCCCCCch------hchhcHHHHHHHHHHHHHhcCCCEEEE-cCCCCCCCCCChHHH---HHHHHHHH
Q 006814 11 NTVRILVATDCHLGYMEKDE------IRRHDSFEAFEEICSIAEQKEVDFVLL-GGDLFHENKPSRSTL---VKAIEILR 80 (630)
Q Consensus 11 ~~mKILh~SD~HLG~~~~d~------~r~~Ds~~tFeeil~~A~~~~VD~VLl-aGDLFd~~~Ps~~tl---~~~~~~Lr 80 (630)
..++|||++|+|-.....+. ....-.+..+..+++.++++++|.|++ +||+|+.. ....+ ...+++|.
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~--~~~~~~~g~~~~~~ln 82 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGP--YISSLTKGKAIIDIMN 82 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSS--HHHHTTTTHHHHHHHT
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCc--hhhhhcCChHHHHHHH
Confidence 46999999999944332210 011112667788888889999999888 99999853 11111 12233332
Q ss_pred hhccCCCccceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhhCCceeEccceee-cC
Q 006814 81 RHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVL-GG 159 (630)
Q Consensus 81 ~l~~g~~p~~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~~glVn~fg~~~l-~~ 159 (630)
. .+.. +++.||||...+...+ .+.+...+. .+++.... ..
T Consensus 83 ~-----------------------------------lg~D-~~tlGNHEfd~G~~~l--~~~l~~~~~-p~l~aNv~~~~ 123 (509)
T 3ive_A 83 T-----------------------------------MPFD-AVTIGNHEFDHGWDNT--LLQLSQAKF-PIVQGNIFYQN 123 (509)
T ss_dssp T-----------------------------------SCCS-EECCCGGGGTTCHHHH--HHHHTTCSS-CBCCCSEEETT
T ss_pred h-----------------------------------cCCc-EEeecccccccCHHHH--HHHHhhCCC-CEEEEEEEECC
Confidence 2 2333 4567999976553322 234444332 11111000 00
Q ss_pred CCccceeEEE-EEEeeCCeeEEEEecCCCC-------hHH-HHhhhcCh-hHHhhcChhhhhhhcCCCceEEEEEccCCC
Q 006814 160 SGVGEITVYP-ILIRKGSTAVALYGLGNIR-------DER-LNRMFQTP-HAVQWMRPEAQEECQVSDWFNILVLHQNRV 229 (630)
Q Consensus 160 ~~~~~i~~~P-i~l~kg~~~valyGl~~i~-------der-l~~~f~~~-~~v~~l~p~~~~~~~~~~~fnIlvlHq~~~ 229 (630)
.+ ..+-..| ..+.+++.+|+|.|+-... ... ..-.|.++ ..++...+.. ...-.+-|++.|....
T Consensus 124 ~~-~p~~~~py~i~e~~G~kIgiiG~t~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~L----k~~~D~iIvl~H~G~~ 198 (509)
T 3ive_A 124 SS-KSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDEL----KGKVDLTVALIHEGVP 198 (509)
T ss_dssp SC-CBSSSCSEEEEEETTEEEEEEEEECHHHHHHHSCGGGCTTEEECCHHHHHHHHHHHH----TTTCSEEEEEEECSSC
T ss_pred CC-CccCcCCeEEEEECCEEEEEEecccCcccccccccccCCCCEEcCHHHHHHHHHHHH----HhcCCEEEEEeccCcC
Confidence 00 0110123 2456788999999983210 000 00011111 0111111111 1124588999999754
Q ss_pred CCCCc----cc---c--c---cccCCCCCcEEEeCcccccccCCeecCCCCceEEcCCC
Q 006814 230 KTNPK----NA---I--N---EHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGS 276 (630)
Q Consensus 230 ~~~~~----~~---i--~---e~~l~~~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS 276 (630)
..... +. . . ...+ .++|+|+.||.|.....|..+. +..++|||+
T Consensus 199 ~~~~~~~~~~~~~~~~~d~~la~~~-~giDlIlgGHtH~~~~~~~~~~--~~~ivqag~ 254 (509)
T 3ive_A 199 ARQSSMGGTDVRRALDKDIQTASQV-KGLDILITGHAHVGTPEPIKVG--NTLILSTDS 254 (509)
T ss_dssp CCCCCC---CCCCCCHHHHHHHHHC-SSCCEEEEESSCCCCSSCEEET--TEEEECCCS
T ss_pred CccccccccccccccchHHHHHhcC-CCCcEEEeCCcCccCCCCeeeC--CEEEEecCh
Confidence 32110 00 0 0 1122 3599999999998765555543 467888875
No 30
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=98.81 E-value=1.8e-08 Score=113.10 Aligned_cols=203 Identities=15% Similarity=0.120 Sum_probs=103.5
Q ss_pred CCCccEEEEEcCCCCCCCCCch-hch----hcHHHHHHHHHHHHHhcCCC-EEEEcCCCCCCCCCCh-HHHHHHHHHHHh
Q 006814 9 IANTVRILVATDCHLGYMEKDE-IRR----HDSFEAFEEICSIAEQKEVD-FVLLGGDLFHENKPSR-STLVKAIEILRR 81 (630)
Q Consensus 9 ~~~~mKILh~SD~HLG~~~~d~-~r~----~Ds~~tFeeil~~A~~~~VD-~VLlaGDLFd~~~Ps~-~tl~~~~~~Lr~ 81 (630)
....++|||++|+|........ .+. .-.+..+..+++.++++++| ++|.+||+|+....+. ..-...+++|..
T Consensus 26 ~~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~ 105 (552)
T 2z1a_A 26 GGFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHR 105 (552)
T ss_dssp --CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHH
T ss_pred CCeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHh
Confidence 4567999999999965432200 000 01255678888888888898 8899999998642110 001123344443
Q ss_pred hccCCCccceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhhCCceeEccc-eeecCC
Q 006814 82 HCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGK-MVLGGS 160 (630)
Q Consensus 82 l~~g~~p~~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~~glVn~fg~-~~l~~~ 160 (630)
+ +. .+++.||||...+... ..+.+...+. .+++. ....+.
T Consensus 106 l-----------------------------------g~-d~~~lGNHEfd~g~~~--l~~~l~~~~~-~~L~aNv~~~~~ 146 (552)
T 2z1a_A 106 L-----------------------------------RY-RAMALGNHEFDLGPGP--LADFLKGARF-KVVSANVDASRE 146 (552)
T ss_dssp T-----------------------------------TC-CEEECCGGGGTTCHHH--HHHHHTTCCS-EEECTTEECTTC
T ss_pred c-----------------------------------CC-CccccccccccCCHHH--HHHHHhhCCC-CEEEEEEecCCC
Confidence 2 22 3678899998765322 2234554443 22221 100000
Q ss_pred C-ccceeEEE-EEEeeCCeeEEEEecCCCChHHHHh-----hhcCh-hHHhhcChhhhhhhcCCCceEEEEEccCCCCCC
Q 006814 161 G-VGEITVYP-ILIRKGSTAVALYGLGNIRDERLNR-----MFQTP-HAVQWMRPEAQEECQVSDWFNILVLHQNRVKTN 232 (630)
Q Consensus 161 ~-~~~i~~~P-i~l~kg~~~valyGl~~i~derl~~-----~f~~~-~~v~~l~p~~~~~~~~~~~fnIlvlHq~~~~~~ 232 (630)
. ... .+.| +.+..++.+|+|.|+-...-..... .|.++ ..++...+... .....+.|++.|.+....
T Consensus 147 ~~~~~-~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~---~~~~d~iIvL~H~g~~~d- 221 (552)
T 2z1a_A 147 PRLKG-LFAPYAVVVVGGERVGIIGLTTPDTREISNPGPTVAFLDPYESAQKAVYELL---AKGVNKIVVLSHLGYGED- 221 (552)
T ss_dssp GGGTT-SCBSEEEEEETTEEEEEEEEECTTHHHHSCCCTTCEECCHHHHHHHHHHHHH---HTTCCCEEEEEESCHHHH-
T ss_pred ccccc-ccCCeEEEEECCEEEEEEEecccchhhccCCCCCcEECCHHHHHHHHHHHHH---hcCCCEEEEEeCCCcchH-
Confidence 0 000 0233 2356678999999985432111000 01110 01111111111 013568899999964210
Q ss_pred CccccccccCCCCCcEEEeCccccccc
Q 006814 233 PKNAINEHFLPRFLDFVVWGHEHECLI 259 (630)
Q Consensus 233 ~~~~i~e~~l~~~~DyVa~GH~H~~~i 259 (630)
..+... + .++|+|+.||.|..+.
T Consensus 222 --~~la~~-~-~gvDlIlgGHtH~~~~ 244 (552)
T 2z1a_A 222 --LKLARR-L-VGVQVIVGGHSHTLLG 244 (552)
T ss_dssp --HHHHTT-C-SSCCEEEECSSCCCBS
T ss_pred --HHHHHh-C-CCccEEEeCCcCcccc
Confidence 011111 2 4699999999999764
No 31
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=98.80 E-value=1.6e-08 Score=114.00 Aligned_cols=185 Identities=17% Similarity=0.208 Sum_probs=95.1
Q ss_pred HHHHHHHHHHhc--C--CC-EEEEcCCCCCCCCCChHHH---HHHHHHHHhhccCCCccceeeechhhhhcccccCcccc
Q 006814 39 AFEEICSIAEQK--E--VD-FVLLGGDLFHENKPSRSTL---VKAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNY 110 (630)
Q Consensus 39 tFeeil~~A~~~--~--VD-~VLlaGDLFd~~~Ps~~tl---~~~~~~Lr~l~~g~~p~~~~~lsd~~~~f~~~~~~lny 110 (630)
.+..+++.++++ + +| ++|.+||+|+.+. ...+ ...+++|+.+
T Consensus 106 rla~~v~~~r~~~~~~gpd~Lll~~GD~~~gs~--~~~~~~g~~~~~~ln~l---------------------------- 155 (562)
T 2wdc_A 106 ALTALIRDQKARVEAEGGKALVLDGGDTWTNSG--LSLLTRGEAVVRWQNLV---------------------------- 155 (562)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEECSCCSSSSH--HHHHHTTHHHHHHHHHH----------------------------
T ss_pred HHHHHHHHHHhhhhcCCCCEEEEeCCCCCCcch--hhhhhCCHHHHHHHHhh----------------------------
Confidence 455667777665 4 89 9999999998642 1111 2345555543
Q ss_pred CCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhhCCceeEccceeecCCCccceeEEEE-EEeeCCeeEEEEecCCCCh
Q 006814 111 EDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPI-LIRKGSTAVALYGLGNIRD 189 (630)
Q Consensus 111 ~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~~glVn~fg~~~l~~~~~~~i~~~Pi-~l~kg~~~valyGl~~i~d 189 (630)
+.+++ + ||||...+... ...++...+. .+++..... ...+.-.+.|. .+.+++.+|+|.|+-...-
T Consensus 156 -------g~d~~-~-GNHEfd~G~~~--l~~~l~~~~~-p~L~aNv~~-~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~ 222 (562)
T 2wdc_A 156 -------GVDHM-V-SHWEWTLGRER--VEELLGLFRG-EFLSYNIVD-DLFGDPLFPAYRIHRVGPYALAVVGASYPYV 222 (562)
T ss_dssp -------TCCEE-C-CSGGGGGCHHH--HHHHHHHCCS-EECCSSCEE-TTTCCBSSCSEEEEEETTEEEEEEEECCTTH
T ss_pred -------CCcEE-e-cchhcccCHHH--HHHHHHhCCC-CEEEEEEEe-cCCCCcccCCeEEEEECCeEEEEEeeccCcc
Confidence 45665 6 99997554322 2234444442 222210000 00000012342 4467889999999854321
Q ss_pred HHHH-------hhhcCh-hHHhhcChhhhhhhcCCCceEEEEEccCCCCCCCccccccccCCCCCcEEEeCcccccccCC
Q 006814 190 ERLN-------RMFQTP-HAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRFLDFVVWGHEHECLIDP 261 (630)
Q Consensus 190 erl~-------~~f~~~-~~v~~l~p~~~~~~~~~~~fnIlvlHq~~~~~~~~~~i~e~~l~~~~DyVa~GH~H~~~i~p 261 (630)
.... -.|.++ ..++...+.... ....+.|++.|...... ..+... + .++|+|+.||.|.....|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~iIvLsH~g~~~d---~~la~~-~-~giDlIlgGHtH~~~~~~ 294 (562)
T 2wdc_A 223 KVSHPESFTEGLSFALDERRLQEAVDKARA---EGANAVVLLSHNGMQLD---AALAER-I-RGIDLILSGHTHDLTPRP 294 (562)
T ss_dssp HHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSEEEEEECSCHHHH---HHHHTT-S-SSCCEEEECSSCCCCSSC
T ss_pred cccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCEEEEEeCCCCcch---HHHHhc-C-CCCcEEEeCCCCCCCccC
Confidence 1000 001110 011111111110 13468999999863210 011111 2 469999999999987655
Q ss_pred eecCCCCceEEcCCC
Q 006814 262 QEVPGMGFHLTQPGS 276 (630)
Q Consensus 262 ~~~~~~~~~I~yPGS 276 (630)
..+ + +..++++|+
T Consensus 295 ~~~-~-~t~vvqag~ 307 (562)
T 2wdc_A 295 WRV-G-KTWIVAGSA 307 (562)
T ss_dssp EEE-T-TEEEEECCS
T ss_pred EEE-C-CEEEEecCc
Confidence 444 2 467888886
No 32
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=98.78 E-value=1.6e-08 Score=112.38 Aligned_cols=205 Identities=17% Similarity=0.197 Sum_probs=98.4
Q ss_pred CCCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHh----cCC-CEEEEcCCCCCCCCCChHH---HHHHHHHHH
Q 006814 9 IANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQ----KEV-DFVLLGGDLFHENKPSRST---LVKAIEILR 80 (630)
Q Consensus 9 ~~~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~----~~V-D~VLlaGDLFd~~~Ps~~t---l~~~~~~Lr 80 (630)
....|+|||++|+|......+. ..-.+..+..+++.+++ .++ |+||.+||+|+.. | ... ....+++|.
T Consensus 5 ~~~~l~Il~~~D~H~~~~~~~~--~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~-~-~~~~~~~~~~~~~ln 80 (516)
T 1hp1_A 5 KTYKITVLHTNDHHGHFWRNEY--GEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGV-P-ESDLQDAEPDFRGMN 80 (516)
T ss_dssp CCEEEEEEEECCCTTCCSCCTT--SCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSC-H-HHHTTTTHHHHHHHH
T ss_pred CceEEEEEEecccccCccCCCC--CCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCc-c-hhhhcCCcHHHHHHh
Confidence 3456999999999987543211 01113334445544443 356 7999999999753 2 111 123445555
Q ss_pred hhccCCCccceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhhCCceeEccceeecCC
Q 006814 81 RHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGS 160 (630)
Q Consensus 81 ~l~~g~~p~~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~~glVn~fg~~~l~~~ 160 (630)
.+ + +.+++.||||...+...+ ...+...+. .+++......
T Consensus 81 ~l-----------------------------------g-~d~~~~GNHEfd~g~~~l--~~~~~~~~~-~~l~aNv~~~- 120 (516)
T 1hp1_A 81 LV-----------------------------------G-YDAMAIGNHEFDNPLTVL--RQQEKWAKF-PLLSANIYQK- 120 (516)
T ss_dssp HH-----------------------------------T-CCEEECCGGGGSSCHHHH--HHHHHHCSS-CEECSSEEET-
T ss_pred cc-----------------------------------C-CCEEeeccccccCCHHHH--HHHHhhCCC-CEEEeEEEEC-
Confidence 43 2 236789999986653221 233444332 1111100000
Q ss_pred CccceeEEE-EEEeeCCeeEEEEecCCCChHHHH-------hhhcCh-hHHhhcChhhhhhhcCCCceEEEEEccCCCCC
Q 006814 161 GVGEITVYP-ILIRKGSTAVALYGLGNIRDERLN-------RMFQTP-HAVQWMRPEAQEECQVSDWFNILVLHQNRVKT 231 (630)
Q Consensus 161 ~~~~i~~~P-i~l~kg~~~valyGl~~i~derl~-------~~f~~~-~~v~~l~p~~~~~~~~~~~fnIlvlHq~~~~~ 231 (630)
....-.+.| ..+..++.+|++.|+....-.... -.|.++ ..++...+.... .....+.|++.|.+....
T Consensus 121 ~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~v~~l~~--~~~~d~iI~l~H~g~~~~ 198 (516)
T 1hp1_A 121 STGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQ--TEKPDIIIAATHMGHYDN 198 (516)
T ss_dssp TTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCSCTTEEECCHHHHHHHHHHHHHH--HTCCSEEEEEEESCCCGG
T ss_pred CCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCccCCcEEeCHHHHHHHHHHHHHh--cCCCCEEEEEecCCccCC
Confidence 000001123 245678899999998432100000 001110 001111111110 013468999999986421
Q ss_pred CC--cc-ccc---cccCC-CCCcEEEeCccccccc
Q 006814 232 NP--KN-AIN---EHFLP-RFLDFVVWGHEHECLI 259 (630)
Q Consensus 232 ~~--~~-~i~---e~~l~-~~~DyVa~GH~H~~~i 259 (630)
.. .+ ... ...++ ..+|+|+.||.|....
T Consensus 199 ~~~~~~~~~~~~la~~~~~~~iDlilgGHtH~~~~ 233 (516)
T 1hp1_A 199 GEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVC 233 (516)
T ss_dssp GCCTTSCCCHHHHHHHSCTTSSSEEECCSSCCBCC
T ss_pred CcccccCchHHHHHHhCCCCceeEEECCCCCcccc
Confidence 10 00 000 11233 3599999999998653
No 33
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=98.62 E-value=1.4e-07 Score=105.26 Aligned_cols=216 Identities=19% Similarity=0.268 Sum_probs=110.4
Q ss_pred CCccEEEEEcCCCCCCCCCchh----chhcHHHHHHHHHHHHHhcCCC-EEEEcCCCCCCCCCChHHH-------HHHHH
Q 006814 10 ANTVRILVATDCHLGYMEKDEI----RRHDSFEAFEEICSIAEQKEVD-FVLLGGDLFHENKPSRSTL-------VKAIE 77 (630)
Q Consensus 10 ~~~mKILh~SD~HLG~~~~d~~----r~~Ds~~tFeeil~~A~~~~VD-~VLlaGDLFd~~~Ps~~tl-------~~~~~ 77 (630)
...++|||++|+|-.....+-. ...-.+..+..+++.++++.++ ++|.+||+|+.. |....+ ...++
T Consensus 17 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs-~~~~~~~~~~~~~~~~~~ 95 (527)
T 3qfk_A 17 GSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGS-PFCNYLIAHSGSSQPLVD 95 (527)
T ss_dssp -CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSS-HHHHHHHHTTCSSHHHHH
T ss_pred CCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCc-HHHHHHhhcccCcchHHH
Confidence 4679999999999654322110 0111255677888888888887 667799999854 221111 23445
Q ss_pred HHHhhccCCCccceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhhCCceeEccceee
Q 006814 78 ILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVL 157 (630)
Q Consensus 78 ~Lr~l~~g~~p~~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~~glVn~fg~~~l 157 (630)
+|..+ ++. +++.||||...+...+ .+++...+. .+++....
T Consensus 96 ~ln~l-----------------------------------g~D-~~t~GNHefd~G~~~l--~~~~~~~~~-p~l~aNv~ 136 (527)
T 3qfk_A 96 FYNRM-----------------------------------AFD-FGTLGNHEFNYGLPYL--KDTLRRLNY-PVLCANIY 136 (527)
T ss_dssp HHHHT-----------------------------------CCC-EECCCGGGGTTCHHHH--HHHHHHCSS-CBCCSSEE
T ss_pred HHHhc-----------------------------------CCc-EEeccccccccCHHHH--HHHHHhCCC-CEEEeEee
Confidence 55432 444 4568999976553322 234444332 11111000
Q ss_pred cCCCccceeEEE-EEEeeCCeeEEEEecCCCC------hHHHH-hhhcCh-hHHhhcChhhhhhhcCCCceEEEEEccCC
Q 006814 158 GGSGVGEITVYP-ILIRKGSTAVALYGLGNIR------DERLN-RMFQTP-HAVQWMRPEAQEECQVSDWFNILVLHQNR 228 (630)
Q Consensus 158 ~~~~~~~i~~~P-i~l~kg~~~valyGl~~i~------derl~-~~f~~~-~~v~~l~p~~~~~~~~~~~fnIlvlHq~~ 228 (630)
.. + ..+...| ..+..++.+|++.|+-... ..... -.|.++ ..++...+.... .-.+-|++.|...
T Consensus 137 ~~-g-~p~~~~py~i~e~~G~kIgviG~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~~----~~D~iIvl~H~G~ 210 (527)
T 3qfk_A 137 EN-D-STLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMKR----HADIIVVCYHGGF 210 (527)
T ss_dssp ET-T-EESSSCSEEEEEETTEEEEEEEEECTTGGGTSCHHHHTTEEECCHHHHHHHHHHHHHH----HCSEEEEEEECCC
T ss_pred eC-C-CCccCCCEEEEEECCEEEEEEEeccCCcccccCccccCCcEEcCHHHHHHHHHHHHHh----CCCEEEEEeCcCc
Confidence 00 0 0000122 3456788999999984321 11000 011111 011111111111 2357899999875
Q ss_pred CCCC----Ccc---------ccccccCCCCCcEEEeCcccccccCCeecCCCCceEEcCCC
Q 006814 229 VKTN----PKN---------AINEHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGS 276 (630)
Q Consensus 229 ~~~~----~~~---------~i~e~~l~~~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS 276 (630)
.... +.. .+... +..++|+|+.||.|..+. ..+. +..|++||+
T Consensus 211 ~~d~~~~~~~~~~~~e~~~~~la~~-~~~giDlIlgGHtH~~~~--~~v~--~~~ivqag~ 266 (527)
T 3qfk_A 211 EKDLESGTPTEVLTGENEGYAMLEA-FSKDIDIFITGHQHRQIA--ERFK--QTAVIQPGT 266 (527)
T ss_dssp SBCTTTCCBSSCCSSSCCHHHHHHH-HGGGCSEEECCSSCCEEE--EEET--TEEEEEECS
T ss_pred ccccccCccccccccchHHHHHHHh-cCCCCcEEEECCCCcccc--eEEC--CEEEeccCh
Confidence 4321 000 11111 225799999999999763 3343 468889886
No 34
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=98.56 E-value=1.8e-07 Score=104.98 Aligned_cols=203 Identities=17% Similarity=0.161 Sum_probs=101.1
Q ss_pred CCCCccEEEEEcCCCCCCCCCchhc--------hhcHHHHHHHHHHHHHhcCC-CEEEEcCCCCCCCCCCh-HHHHHHHH
Q 006814 8 DIANTVRILVATDCHLGYMEKDEIR--------RHDSFEAFEEICSIAEQKEV-DFVLLGGDLFHENKPSR-STLVKAIE 77 (630)
Q Consensus 8 ~~~~~mKILh~SD~HLG~~~~d~~r--------~~Ds~~tFeeil~~A~~~~V-D~VLlaGDLFd~~~Ps~-~tl~~~~~ 77 (630)
...-.++|||++|+|..+...+... ..-.+..+..+++.++++.+ +++|.+||+|+....+. ..-...++
T Consensus 21 ~~~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~ 100 (546)
T 4h2g_A 21 PDPWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAH 100 (546)
T ss_dssp --CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHH
T ss_pred CCceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHH
Confidence 3445799999999996554322100 01125667788888888777 59999999998652211 00123444
Q ss_pred HHHhhccCCCccceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHH-HhhhhCCceeEcccee
Q 006814 78 ILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAV-DILSACNLVNYFGKMV 156 (630)
Q Consensus 78 ~Lr~l~~g~~p~~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~l-diL~~~glVn~fg~~~ 156 (630)
+|..+ ++. +++.||||...+... .. .++...+. .+++...
T Consensus 101 ~ln~l-----------------------------------g~d-~~~~GNHEfd~g~~~--l~~~~~~~~~~-~~l~aNv 141 (546)
T 4h2g_A 101 FMNAL-----------------------------------RYD-AMALGNHEFDNGVEG--LIEPLLKEAKF-PILSANI 141 (546)
T ss_dssp HHHHH-----------------------------------TCS-EEECCGGGGTTHHHH--HHTTTTTTCSS-CEECSSE
T ss_pred HHHhc-----------------------------------CCc-EEeccCcccccCHHH--HHHHHHhhcCC-CEEEEEe
Confidence 55443 333 567899997544221 11 23333331 1111100
Q ss_pred ecCCC--ccce--eEEE-EEEeeCCeeEEEEecCCCChHHHH-----hhhcCh-hHHhhcChhhhhhhcCCCceEEEEEc
Q 006814 157 LGGSG--VGEI--TVYP-ILIRKGSTAVALYGLGNIRDERLN-----RMFQTP-HAVQWMRPEAQEECQVSDWFNILVLH 225 (630)
Q Consensus 157 l~~~~--~~~i--~~~P-i~l~kg~~~valyGl~~i~derl~-----~~f~~~-~~v~~l~p~~~~~~~~~~~fnIlvlH 225 (630)
.. .+ ...+ .+.| ..+.+++.+|+|.|+-...-.... -.|.++ ..++...+.... ..-.+.|++.|
T Consensus 142 ~~-~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~g~D~iI~l~H 217 (546)
T 4h2g_A 142 KA-KGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGH 217 (546)
T ss_dssp EE-CHHHHHHHBTTBBSEEEEEETTEEEEEEEEECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHH---TTCCCEEEEEE
T ss_pred ec-CCCCCccccccCCCeEEEEECCEEEEEEEecccccccccCCCCCcEEccHHHHHHHHHHHHHh---cCCCEEEEEec
Confidence 00 00 0000 0122 345678899999998543211110 011110 011111111110 12468999999
Q ss_pred cCCCCCCCccccccccCCCCCcEEEeCcccccc
Q 006814 226 QNRVKTNPKNAINEHFLPRFLDFVVWGHEHECL 258 (630)
Q Consensus 226 q~~~~~~~~~~i~e~~l~~~~DyVa~GH~H~~~ 258 (630)
..... ...+. ..+ .++|+|+.||.|...
T Consensus 218 ~g~~~---d~~la-~~~-~giDlIlgGHtH~~~ 245 (546)
T 4h2g_A 218 SGFEM---DKLIA-QKV-RGVDVVVGGHSNTFL 245 (546)
T ss_dssp SCHHH---HHHHH-HHS-TTCCEEECCSSCCCC
T ss_pred cCccc---hHHHH-HhC-CCCcEEEeCCcCccc
Confidence 86421 01111 122 469999999999864
No 35
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=98.46 E-value=4.8e-07 Score=102.24 Aligned_cols=57 Identities=21% Similarity=0.215 Sum_probs=38.9
Q ss_pred CCCccEEEEEcCCCCCCCCCch---hc------hhcHHHHHHHHHHHHHhcCCC-EEEEcCCCCCCC
Q 006814 9 IANTVRILVATDCHLGYMEKDE---IR------RHDSFEAFEEICSIAEQKEVD-FVLLGGDLFHEN 65 (630)
Q Consensus 9 ~~~~mKILh~SD~HLG~~~~d~---~r------~~Ds~~tFeeil~~A~~~~VD-~VLlaGDLFd~~ 65 (630)
..-.++|||++|+|-.+...+. .. ..-.+..+..+++.++++.++ ++|.+||+|+..
T Consensus 9 ~~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs 75 (579)
T 3ztv_A 9 KAVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGT 75 (579)
T ss_dssp CCEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSS
T ss_pred CceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCc
Confidence 3456999999999954433210 00 001266677888888888887 889999999864
No 36
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=98.43 E-value=6.6e-06 Score=87.09 Aligned_cols=54 Identities=19% Similarity=0.223 Sum_probs=37.1
Q ss_pred CccEEEEEcCCCCCCCCCchh----chhcHHHHHHHHHHHHHhcCCC-EEEEcCCCCCC
Q 006814 11 NTVRILVATDCHLGYMEKDEI----RRHDSFEAFEEICSIAEQKEVD-FVLLGGDLFHE 64 (630)
Q Consensus 11 ~~mKILh~SD~HLG~~~~d~~----r~~Ds~~tFeeil~~A~~~~VD-~VLlaGDLFd~ 64 (630)
-.++|||++|+|-.....+.. ...-.+..+..+++.++++.++ ++|.+||+|+.
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qG 65 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQG 65 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSS
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCC
Confidence 368999999999765432210 0111355667778888888777 66889999964
No 37
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=98.34 E-value=3.7e-06 Score=89.00 Aligned_cols=55 Identities=20% Similarity=0.292 Sum_probs=36.3
Q ss_pred CccEEEEEcCCCCCCCCCchh----chhcHHHHHHHHHHHHHhcCCC-EEEEcCCCCCCC
Q 006814 11 NTVRILVATDCHLGYMEKDEI----RRHDSFEAFEEICSIAEQKEVD-FVLLGGDLFHEN 65 (630)
Q Consensus 11 ~~mKILh~SD~HLG~~~~d~~----r~~Ds~~tFeeil~~A~~~~VD-~VLlaGDLFd~~ 65 (630)
-.++|||++|+|-.....+.. ...-.+..+..+++.++++.++ ++|.+||+|..+
T Consensus 10 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qGs 69 (341)
T 3gve_A 10 VHLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGN 69 (341)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSS
T ss_pred eEEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCCc
Confidence 368999999999665432210 0111245667777778877777 556799999753
No 38
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=98.05 E-value=1.7e-06 Score=85.21 Aligned_cols=45 Identities=18% Similarity=0.199 Sum_probs=36.2
Q ss_pred CCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhc-CCCEEEEcCCCCCCCC
Q 006814 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK-EVDFVLLGGDLFHENK 66 (630)
Q Consensus 10 ~~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~-~VD~VLlaGDLFd~~~ 66 (630)
..+|||+++||+|-. +..|+++++.+... ++|.|+++||+++...
T Consensus 10 ~~~~~i~visDiHg~------------~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~ 55 (221)
T 1g5b_A 10 SKYRNIWVVGDLHGC------------YTNLMNKLDTIGFDNKKDLLISVGDLVDRGA 55 (221)
T ss_dssp GGCSCEEEECCCTTC------------HHHHHHHHHHHTCCTTTCEEEECSCCSSSSS
T ss_pred CCCceEEEEEcCCCC------------HHHHHHHHHHccCCCCCCEEEEeCCccCCCC
Confidence 457999999999942 45688888877653 7999999999998653
No 39
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=97.94 E-value=4.5e-06 Score=84.95 Aligned_cols=42 Identities=24% Similarity=0.389 Sum_probs=34.3
Q ss_pred cEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCC-CEEEEcCCCCCCCC
Q 006814 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEV-DFVLLGGDLFHENK 66 (630)
Q Consensus 13 mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~V-D~VLlaGDLFd~~~ 66 (630)
+||+++||+| |. +..|+++++.+....+ |.||++||++|...
T Consensus 19 ~~i~visDiH-g~-----------~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~ 61 (262)
T 2qjc_A 19 GRVIIVGDIH-GC-----------RAQLEDLLRAVSFKQGSDTLVAVGDLVNKGP 61 (262)
T ss_dssp SCEEEECCCT-TC-----------HHHHHHHHHHHTCCTTTSEEEECSCCSSSSS
T ss_pred CeEEEEeCCC-CC-----------HHHHHHHHHHHhccCCCCEEEEecCCCCCCC
Confidence 4999999999 42 4568888888876664 99999999999753
No 40
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=97.93 E-value=1.5e-05 Score=89.72 Aligned_cols=59 Identities=20% Similarity=0.256 Sum_probs=35.8
Q ss_pred CCCCCCccEEEEEcCCCCCCCCCch--h-c-hhcHHHHHHHHHHH-HHhcCCC-EEEEcCCCCCC
Q 006814 6 REDIANTVRILVATDCHLGYMEKDE--I-R-RHDSFEAFEEICSI-AEQKEVD-FVLLGGDLFHE 64 (630)
Q Consensus 6 ~~~~~~~mKILh~SD~HLG~~~~d~--~-r-~~Ds~~tFeeil~~-A~~~~VD-~VLlaGDLFd~ 64 (630)
++.....++|||++|+|-....... . . ..-.+..+-..++. +.++++| ++|.+||+|+.
T Consensus 9 ~~~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~G 73 (557)
T 3c9f_A 9 RNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDG 73 (557)
T ss_dssp CCCCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSS
T ss_pred CCCCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCC
Confidence 3445678999999999987543210 0 0 00013444444443 3357788 47999999975
No 41
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=97.80 E-value=8.6e-05 Score=76.57 Aligned_cols=191 Identities=14% Similarity=0.139 Sum_probs=102.0
Q ss_pred CccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhc-CCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccCCCcc
Q 006814 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK-EVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPV 89 (630)
Q Consensus 11 ~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~-~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g~~p~ 89 (630)
..||||+++|+| |+. -+..+...+...+++ ++|++++-||-+-...+-.. ...+.|..+
T Consensus 3 ~~m~ilf~GDv~-G~~---------G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~~---~~~~~ln~~------- 62 (281)
T 1t71_A 3 NSIKFIFLGDVY-GKA---------GRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSL---KHYEFLKEA------- 62 (281)
T ss_dssp CCCEEEEECEEB-HHH---------HHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCH---HHHHHHHHH-------
T ss_pred ceEEEEEECCcC-ChH---------HHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcCH---HHHHHHHhc-------
Confidence 459999999999 542 234455566666554 68999998888765544332 344555443
Q ss_pred ceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhhCCce---eEccceeecCCCcccee
Q 006814 90 QFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLV---NYFGKMVLGGSGVGEIT 166 (630)
Q Consensus 90 ~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~~glV---n~fg~~~l~~~~~~~i~ 166 (630)
++-+.++ |||+.-.+.+ .+++|.....+ || .. ...... .
T Consensus 63 ----------------------------G~Da~Tl-GNHefD~g~~---~~~~l~~~~~v~~aN~-p~---~~~~~~--~ 104 (281)
T 1t71_A 63 ----------------------------GVNYITM-GNHTWFQKLD---LAVVINKKDLVRPLNL-DT---SFAFHN--L 104 (281)
T ss_dssp ----------------------------TCCEEEC-CTTTTCCGGG---HHHHTTCTTEECBSCB-CT---TSTTTT--S
T ss_pred ----------------------------CCCEEEE-ccCcccCCcc---HHHHhhhcCEEeeccC-Cc---cccccc--C
Confidence 5566655 8999877622 22333321111 11 00 000000 0
Q ss_pred EEE-EEEeeCCeeEEEEecC----CCChHHHHhhhcChh-HHhhcChhhhhhhcCCCceEEEEEccCCCCCCCccccccc
Q 006814 167 VYP-ILIRKGSTAVALYGLG----NIRDERLNRMFQTPH-AVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEH 240 (630)
Q Consensus 167 ~~P-i~l~kg~~~valyGl~----~i~derl~~~f~~~~-~v~~l~p~~~~~~~~~~~fnIlvlHq~~~~~~~~~~i~e~ 240 (630)
..| ..+..++.+|++.|+- ++. -.+.++- .++.+... ..-.+-|++.|..... ....-..
T Consensus 105 g~g~~I~e~~G~kIgVIgl~g~~~f~~-----~~~~~pf~~a~~~v~~------~~~diIIv~~H~g~t~---Ek~~la~ 170 (281)
T 1t71_A 105 GQGSLVFEFNKAKIRITNLLGTSVPLP-----FKTTNPFKVLKELILK------RDCDLHIVDFHAETTS---EKNAFCM 170 (281)
T ss_dssp SBSEEEEECSSCEEEEEEEECTTSCCS-----SCBCCHHHHHHHHHTT------CCCSEEEEEEECSCHH---HHHHHHH
T ss_pred CCCeEEEEECCEEEEEEEeeccccccC-----ccccCHHHHHHHHHhh------cCCCEEEEEeCCCchH---HHHHHHH
Confidence 012 3456678899998862 221 0122210 11111111 1235789999974311 1001112
Q ss_pred cCCCCCcEEEeCcccccccCCeecCCCCceEEc
Q 006814 241 FLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQ 273 (630)
Q Consensus 241 ~l~~~~DyVa~GH~H~~~i~p~~~~~~~~~I~y 273 (630)
.++..+|+|+-||.|....+++.+++...++.+
T Consensus 171 ~~dg~VD~VvGgHTHv~t~d~~il~~gt~~i~d 203 (281)
T 1t71_A 171 AFDGYVTTIFGTHTHVPSADLRITPKGSAYITD 203 (281)
T ss_dssp HHTTTSSEEEEESSSSCCTTCEECTTSCEEESC
T ss_pred hCCCCeEEEEeCCCCcCCCceEEecCCcEEEec
Confidence 355679999999999998877666543333443
No 42
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=97.77 E-value=1.3e-05 Score=82.64 Aligned_cols=68 Identities=22% Similarity=0.258 Sum_probs=50.5
Q ss_pred cEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHh-cCCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccCCCccce
Q 006814 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQ-KEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQF 91 (630)
Q Consensus 13 mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~-~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g~~p~~~ 91 (630)
|||++++|+|.. +..|+++++.+.. .++|.++++||++|....+. .++++|..+
T Consensus 1 M~i~vigDiHG~------------~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~----~~l~~l~~l--------- 55 (280)
T 2dfj_A 1 MATYLIGDVHGC------------YDELIALLHKVEFTPGKDTLWLTGDLVARGPGSL----DVLRYVKSL--------- 55 (280)
T ss_dssp -CEEEECCCCSC------------HHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHH----HHHHHHHHT---------
T ss_pred CeEEEEecCCCC------------HHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccH----HHHHHHHhC---------
Confidence 789999999964 4567888877765 47899999999999764333 355566543
Q ss_pred eeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 006814 92 QVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (630)
Q Consensus 92 ~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p 131 (630)
..+|++|.||||..
T Consensus 56 --------------------------~~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 56 --------------------------GDSVRLVLGNHDLH 69 (280)
T ss_dssp --------------------------GGGEEECCCHHHHH
T ss_pred --------------------------CCceEEEECCCcHH
Confidence 12799999999953
No 43
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=97.63 E-value=0.00018 Score=80.11 Aligned_cols=54 Identities=19% Similarity=0.239 Sum_probs=35.0
Q ss_pred ccEEEEEcCCCCCCCCCch--------hchhcHHHHHHHHHHHHHhcCCC-EEEEcCCCCCCC
Q 006814 12 TVRILVATDCHLGYMEKDE--------IRRHDSFEAFEEICSIAEQKEVD-FVLLGGDLFHEN 65 (630)
Q Consensus 12 ~mKILh~SD~HLG~~~~d~--------~r~~Ds~~tFeeil~~A~~~~VD-~VLlaGDLFd~~ 65 (630)
.++|||++|+|--....+. ....-.+..+..+++.+++++++ ++|.+||+|..+
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs 65 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGT 65 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSS
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccch
Confidence 3789999999954432211 00011255667777888888877 455699999864
No 44
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=97.48 E-value=0.00097 Score=73.30 Aligned_cols=54 Identities=15% Similarity=0.212 Sum_probs=35.4
Q ss_pred CCCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHH--------HHHHhcCCCEEEEcCCCCCCC
Q 006814 9 IANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEIC--------SIAEQKEVDFVLLGGDLFHEN 65 (630)
Q Consensus 9 ~~~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil--------~~A~~~~VD~VLlaGDLFd~~ 65 (630)
....-+|+++||+|+|..... ..+.++.|-+.| +.....++..||+|||+++..
T Consensus 197 ~~~~~~ialVSGL~igs~~~~---~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~ 258 (476)
T 3e0j_A 197 LDTDRFVLLVSGLGLGGGGGE---SLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHS 258 (476)
T ss_dssp CSSCCEEEEECCCCBTSSCHH---HHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-
T ss_pred CCCCCEEEEECCcccCCCccc---chHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccc
Confidence 345679999999999975311 122344443322 133456899999999999985
No 45
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=97.46 E-value=0.00057 Score=69.53 Aligned_cols=186 Identities=16% Similarity=0.116 Sum_probs=99.6
Q ss_pred cEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccCCCcccee
Q 006814 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQFQ 92 (630)
Q Consensus 13 mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g~~p~~~~ 92 (630)
||||++.|+= |.. -+.++...+...+++. |+||+-|+-+-...+-.. ...+.|.+
T Consensus 1 m~ilf~GDv~-g~~---------G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~~---~~~~~l~~----------- 55 (255)
T 1t70_A 1 MRVLFIGDVF-GQP---------GRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMHR---DAARGALE----------- 55 (255)
T ss_dssp CEEEEECCBB-HHH---------HHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCCH---HHHHHHHH-----------
T ss_pred CEEEEEeccC-ChH---------HHHHHHHHHHHHHhhC-CEEEECCCCccCCcCCCH---HHHHHHHh-----------
Confidence 8999999985 422 1456777888888777 988887665544333322 23444443
Q ss_pred eechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhhCC--ce---eEccceeecCCCccceeE
Q 006814 93 VVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACN--LV---NYFGKMVLGGSGVGEITV 167 (630)
Q Consensus 93 ~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~~g--lV---n~fg~~~l~~~~~~~i~~ 167 (630)
.++-++++ |||+...+ + .++.|.... .+ ||--... . .
T Consensus 56 ------------------------~G~Da~Tl-GNHefD~~-~---l~~~l~~~~~~~~~~aN~~~~~~---p--g---- 97 (255)
T 1t70_A 56 ------------------------AGAGCLTL-GNHAWHHK-D---IYPMLSEDTYPIVRPLNYADPGT---P--G---- 97 (255)
T ss_dssp ------------------------HTCSEEEC-CTTTTSST-T---HHHHHHTTCSCEECCSCCCCTTC---S--S----
T ss_pred ------------------------CCCCEEEe-ccccccCc-h---HHHHHhhCCCcEEEEeccCCCCC---C--C----
Confidence 25666666 99998754 2 234444433 11 2210000 0 0
Q ss_pred EE-EEEeeCCeeEEEEecCCCChHHHHhhhcChh-HHhhcChhhhhhhcCCCceEEEEEccCCCCCCCccccccccCCCC
Q 006814 168 YP-ILIRKGSTAVALYGLGNIRDERLNRMFQTPH-AVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRF 245 (630)
Q Consensus 168 ~P-i~l~kg~~~valyGl~~i~derl~~~f~~~~-~v~~l~p~~~~~~~~~~~fnIlvlHq~~~~~~~~~~i~e~~l~~~ 245 (630)
.| ..+++++.+|++.|+--. ..+ ..|.++- .++.+.+.. .-.+-|++.|..... ....-...++..
T Consensus 98 ~g~~I~~~~G~kIgVigl~g~--~~~-~~~~~p~~~~~~~v~~l------~~d~IIv~~H~e~t~---Ek~~la~~~dg~ 165 (255)
T 1t70_A 98 VGWRTFDVNGEKLTVVNLLGR--VFM-EAVDNPFRTMDALLERD------DLGTVFVDFHAEATS---EKEAMGWHLAGR 165 (255)
T ss_dssp CSEEEEECSSSEEEEEEEECC--TTS-CCCSCHHHHHHHHTTCS------SCCEEEEEEECSCHH---HHHHHHHHHTTS
T ss_pred CCeEEEEECCEEEEEEEeecC--cCc-ccccCHHHHHHHHHHHh------CCCEEEEEeCCCChH---HHHHHHHhCCCC
Confidence 12 345667889999886211 000 0122221 112221111 234789999964211 100011245567
Q ss_pred CcEEEeCcccccccCCeecCCCCceEEc
Q 006814 246 LDFVVWGHEHECLIDPQEVPGMGFHLTQ 273 (630)
Q Consensus 246 ~DyVa~GH~H~~~i~p~~~~~~~~~I~y 273 (630)
+|+|+-||.|....+++.+++...++.+
T Consensus 166 vd~VvGgHTHv~~~d~~il~~gt~~i~d 193 (255)
T 1t70_A 166 VAAVIGTHTHVPTADTRILKGGTAYQTD 193 (255)
T ss_dssp SSEEEEESSCSCBSCCEEETTTEEEESC
T ss_pred eEEEEeCCCCcCCCceEEcCCCeEEEEc
Confidence 9999999999988777666543233443
No 46
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=97.39 E-value=0.00017 Score=76.22 Aligned_cols=55 Identities=9% Similarity=0.245 Sum_probs=39.1
Q ss_pred CccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHh--------cCCCEEEEcCCCCCCCCCChHHHHHHHHHHHh
Q 006814 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQ--------KEVDFVLLGGDLFHENKPSRSTLVKAIEILRR 81 (630)
Q Consensus 11 ~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~--------~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~ 81 (630)
..|||++++|+|.. +..|.++++.+.. .++|.+++.||++|...-+.. ++++|..
T Consensus 69 ~~~~i~vigDiHG~------------~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~e----vl~~l~~ 131 (342)
T 2z72_A 69 GIKKVVALSDVHGQ------------YDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNE----VLWFMYQ 131 (342)
T ss_dssp CCCEEEEECCCTTC------------HHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHH----HHHHHHH
T ss_pred CCCCEEEEECCCCC------------HHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHH----HHHHHHH
Confidence 46899999999954 3557777776542 158999999999997654444 4444444
No 47
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=97.21 E-value=0.0031 Score=63.94 Aligned_cols=182 Identities=18% Similarity=0.222 Sum_probs=99.6
Q ss_pred cEEEEEcCC--CCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEc-CCCCCCCCCChHHHHHHHHHHHhhccCCCcc
Q 006814 13 VRILVATDC--HLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLG-GDLFHENKPSRSTLVKAIEILRRHCLNDRPV 89 (630)
Q Consensus 13 mKILh~SD~--HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLla-GDLFd~~~Ps~~tl~~~~~~Lr~l~~g~~p~ 89 (630)
||||++.|+ |-| +..+...+...+++. |+||+- ||.|+..-.+. ...+.|.+
T Consensus 1 m~ilfiGDi~g~~G------------~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~~----~~~~~l~~-------- 55 (252)
T 2z06_A 1 MRVLFIGDVMAEPG------------LRAVGLHLPDIRDRY-DLVIANGENAARGKGLDR----RSYRLLRE-------- 55 (252)
T ss_dssp CEEEEECCBCHHHH------------HHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCCH----HHHHHHHH--------
T ss_pred CEEEEEEecCCccc------------HHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcCH----HHHHHHHh--------
Confidence 899999998 443 456788888888887 988774 56666543332 23444443
Q ss_pred ceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCcchHHHhhhhCCce---eEccceeecCCCcccee
Q 006814 90 QFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLV---NYFGKMVLGGSGVGEIT 166 (630)
Q Consensus 90 ~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~~glV---n~fg~~~l~~~~~~~i~ 166 (630)
.++-++ ..|||..-.+ + .++.|....++ ||- . +..
T Consensus 56 ---------------------------~G~D~~-T~GNHefD~~-~---l~~~l~~~~~vrpaN~~-~----~~p----- 93 (252)
T 2z06_A 56 ---------------------------AGVDLV-SLGNHAWDHK-E---VYALLESEPVVRPLNYP-P----GTP----- 93 (252)
T ss_dssp ---------------------------HTCCEE-ECCTTTTSCT-T---HHHHHHHSSEECCTTSC-S----SCS-----
T ss_pred ---------------------------CCCCEE-EeccEeeECc-h---HHHHhccCCceEeecCC-C----CCC-----
Confidence 356666 4599998765 2 23344332211 110 0 000
Q ss_pred EEE-EEEeeCCeeEEEEecCCCChHHHHhhhcChh-HHhhcChhhhhhhcCCCceEEEEEccCCCCCCCccccccccCCC
Q 006814 167 VYP-ILIRKGSTAVALYGLGNIRDERLNRMFQTPH-AVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPR 244 (630)
Q Consensus 167 ~~P-i~l~kg~~~valyGl~~i~derl~~~f~~~~-~v~~l~p~~~~~~~~~~~fnIlvlHq~~~~~~~~~~i~e~~l~~ 244 (630)
..| ..+.+++.+|++.|+--.. .+ ..|.++- .++.+... .. -.+-|++.|..... ....-..+++.
T Consensus 94 g~~~~i~~~~G~kIgVi~l~g~~--~~-~~~~~pf~~~~~~v~~----lk--~d~IIv~~H~g~ts---ek~~la~~~dg 161 (252)
T 2z06_A 94 GKGFWRLEVGGESLLFVQVMGRI--FM-DPLDDPFRALDRLLEE----EK--ADYVLVEVHAEATS---EKMALAHYLDG 161 (252)
T ss_dssp SCSEEEEEETTEEEEEEEEECCT--TS-CCCCCHHHHHHHHHHH----CC--CSEEEEEEECSCHH---HHHHHHHHHBT
T ss_pred CCCeEEEEECCEEEEEEEccccc--Cc-cccCCHHHHHHHHHHH----hC--CCEEEEEeCCCcHH---HHHHHHHhCCC
Confidence 012 3456788899988762110 00 0122221 11111111 11 34789999975311 00011224556
Q ss_pred CCcEEEeCcccccccCCeecCCCCceEEc
Q 006814 245 FLDFVVWGHEHECLIDPQEVPGMGFHLTQ 273 (630)
Q Consensus 245 ~~DyVa~GH~H~~~i~p~~~~~~~~~I~y 273 (630)
.+|+|+-||.|....+|+.+++...++.+
T Consensus 162 ~Vd~VvGgHTHv~t~d~~il~~gt~~itd 190 (252)
T 2z06_A 162 RASAVLGTHTHVPTLDATRLPKGTLYQTD 190 (252)
T ss_dssp TBSEEEEESSCSCBSCCEECTTSCEEESC
T ss_pred CeEEEEcCCCCcCCCccEEcCCCcEeecC
Confidence 79999999999988877777553344454
No 48
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=97.15 E-value=0.00058 Score=71.32 Aligned_cols=74 Identities=20% Similarity=0.233 Sum_probs=53.0
Q ss_pred ccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccCCCccce
Q 006814 12 TVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQF 91 (630)
Q Consensus 12 ~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g~~p~~~ 91 (630)
.++|.+++|+|-- +..|.++++.+.....|.+++.||++|...-+.+ ++.+|..+.
T Consensus 49 ~~~i~viGDIHG~------------~~~L~~ll~~~~~~~~~~~vflGD~VDRG~~s~e----vl~lL~~lk-------- 104 (309)
T 2ie4_C 49 RCPVTVCGDVHGQ------------FHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVE----TVTLLVALK-------- 104 (309)
T ss_dssp CSSEEEECCCTTC------------HHHHHHHHHHHCCTTTSCEEECSCCSSSSTTHHH----HHHHHHHHH--------
T ss_pred cCCEEEEecCCCC------------HHHHHHHHHHcCCCCCCEEEEeCCccCCCCChHH----HHHHHHHHH--------
Confidence 3789999999953 4567888887766677889999999998755544 444554431
Q ss_pred eeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCC
Q 006814 92 QVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPA 132 (630)
Q Consensus 92 ~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p~ 132 (630)
+ ...-.|+++.||||...
T Consensus 105 ----------------~-------~~p~~v~~lrGNHE~~~ 122 (309)
T 2ie4_C 105 ----------------V-------RYRERITILRGNHESRQ 122 (309)
T ss_dssp ----------------H-------HCTTTEEECCCTTSSTT
T ss_pred ----------------h-------hCCCcEEEEeCCCCHHH
Confidence 0 11235999999999864
No 49
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=97.05 E-value=0.00095 Score=72.99 Aligned_cols=51 Identities=20% Similarity=0.264 Sum_probs=37.4
Q ss_pred CccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcC-CCEEEEcCCCCCCCCCChHHHH
Q 006814 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKE-VDFVLLGGDLFHENKPSRSTLV 73 (630)
Q Consensus 11 ~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~-VD~VLlaGDLFd~~~Ps~~tl~ 73 (630)
..|||++++|+|-. +..+.++++.+.... .|.+|+.||++|...-+.+++.
T Consensus 211 ~~~~~~vigDiHG~------------~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~s~e~~~ 262 (477)
T 1wao_1 211 ETEKITVCGDTHGQ------------FYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVIL 262 (477)
T ss_dssp SSCEEEEECBCTTC------------HHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHHHHH
T ss_pred CCcceEEEeCCCCC------------HHHHHHHHHHcCCCCCcCeEEEeccccCCCcchHHHHH
Confidence 46999999999954 456777777765443 4569999999998765655443
No 50
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=96.98 E-value=0.00098 Score=70.20 Aligned_cols=72 Identities=18% Similarity=0.188 Sum_probs=52.5
Q ss_pred cEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccCCCcccee
Q 006814 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQFQ 92 (630)
Q Consensus 13 mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g~~p~~~~ 92 (630)
++|.+++|+|-- +..|.++++.+.....|-+|+.||+.|...-|.+ ++.+|..+.
T Consensus 57 ~~i~viGDIHG~------------~~~L~~ll~~~g~~~~~~~vflGD~VDRG~~s~e----vl~lL~~lk--------- 111 (330)
T 1fjm_A 57 APLKICGDIHGQ------------YYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLE----TICLLLAYK--------- 111 (330)
T ss_dssp SSEEEECBCTTC------------HHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHH----HHHHHHHHH---------
T ss_pred CceEEecCCCCC------------HHHHHHHHHHhCCCCcceEEeCCCcCCCCCChHH----HHHHHHHhh---------
Confidence 679999999964 4667888887766667889999999998755554 444554431
Q ss_pred eechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 006814 93 VVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (630)
Q Consensus 93 ~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I~GNHD~p 131 (630)
+ ...-.|+++.||||..
T Consensus 112 ---------------~-------~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 112 ---------------I-------KYPENFFLLRGNHECA 128 (330)
T ss_dssp ---------------H-------HSTTTEEECCCTTSSH
T ss_pred ---------------h-------hcCCceEEecCCchHh
Confidence 0 1123699999999975
No 51
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=96.92 E-value=0.0019 Score=67.51 Aligned_cols=51 Identities=20% Similarity=0.237 Sum_probs=37.4
Q ss_pred CCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCC-CEEEEcCCCCCCCCCChHHH
Q 006814 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEV-DFVLLGGDLFHENKPSRSTL 72 (630)
Q Consensus 10 ~~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~V-D~VLlaGDLFd~~~Ps~~tl 72 (630)
...+||.+++|+|-. +..|.++++.+..... +.+++.||++|...-+.+++
T Consensus 57 p~~~ri~viGDIHG~------------~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~evl 108 (315)
T 3h63_A 57 KETEKITVCGDTHGQ------------FYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVI 108 (315)
T ss_dssp CTTCEEEEECCCTTC------------HHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHHHH
T ss_pred CCCceEEEEecCCCC------------HHHHHHHHHHhCCCCCCCEEEEeCCccCCCcChHHHH
Confidence 346899999999975 4567778776654433 45999999999876565543
No 52
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=96.84 E-value=0.0025 Score=67.22 Aligned_cols=51 Identities=20% Similarity=0.163 Sum_probs=38.5
Q ss_pred CccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCC-CEEEEcCCCCCCCCCChHHHH
Q 006814 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEV-DFVLLGGDLFHENKPSRSTLV 73 (630)
Q Consensus 11 ~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~V-D~VLlaGDLFd~~~Ps~~tl~ 73 (630)
..|||.+++|+|-- +..|.++++.+..... +.+|+.||++|...-+.+++.
T Consensus 62 ~~~ri~viGDIHG~------------~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~evl~ 113 (335)
T 3icf_A 62 PDVKISVCGDTHGQ------------FYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCEVAL 113 (335)
T ss_dssp TTCEEEEECCCTTC------------HHHHHHHHHHHCCCBTTEEEEECSCCSSSSTTHHHHHH
T ss_pred cCceEEEEecCCCC------------HHHHHHHHHHcCCCCCCcEEEEeCCccCCCcChHHHHH
Confidence 67999999999986 4567778877654433 469999999998766655443
No 53
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=96.82 E-value=0.0017 Score=67.51 Aligned_cols=48 Identities=17% Similarity=0.161 Sum_probs=38.8
Q ss_pred cEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHH
Q 006814 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTL 72 (630)
Q Consensus 13 mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl 72 (630)
++|.+++|+|-- +..|.++++.+.....|.+|+.||++|...-+.+++
T Consensus 56 ~~i~viGDIHG~------------~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s~evl 103 (299)
T 3e7a_A 56 APLKICGDIHGQ------------YYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETI 103 (299)
T ss_dssp SSEEEECBCTTC------------HHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHHHH
T ss_pred CCEEEEecCCCC------------HHHHHHHHHHhCCCCCccEEeCCcccCCCCCcHHHH
Confidence 579999999986 467888888877677888999999999876565543
No 54
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=96.58 E-value=0.003 Score=67.08 Aligned_cols=48 Identities=17% Similarity=0.139 Sum_probs=38.6
Q ss_pred cEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHH
Q 006814 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTL 72 (630)
Q Consensus 13 mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl 72 (630)
++|.+++|+|-- +..|.++++.+.....|.+|+.||++|...-+.+++
T Consensus 70 ~pi~ViGDIHG~------------~~dL~~ll~~~g~~~~~~~vfLGD~VDRG~~s~Evl 117 (357)
T 3ll8_A 70 APVTVCGDIHGQ------------FFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECV 117 (357)
T ss_dssp SSEEEECCCTTC------------HHHHHHHHHHHCCTTTCCEEECSCCSSSSTTHHHHH
T ss_pred ccceeeccCCCC------------HHHHHHHHHhcCCCCCcEEEECCCccCCCcChHHHH
Confidence 579999999986 456778888777777899999999999876565543
No 55
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=96.57 E-value=0.0029 Score=70.06 Aligned_cols=49 Identities=16% Similarity=0.136 Sum_probs=37.8
Q ss_pred ccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHH
Q 006814 12 TVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTL 72 (630)
Q Consensus 12 ~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl 72 (630)
.++|.+++|+|-- +..|.++++.+.....|.+|+.||++|...-+.+++
T Consensus 82 ~~pI~VIGDIHGq------------~~dL~~LL~~~g~p~~d~yVFLGDyVDRGp~S~Evl 130 (521)
T 1aui_A 82 DAPVTVCGDIHGQ------------FFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECV 130 (521)
T ss_dssp CSSEEEECCCTTC------------HHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHHHHH
T ss_pred ccceeeccCCCCC------------HHHHHHHHHhcCCCCcceEEEcCCcCCCCCCHHHHH
Confidence 3679999999965 456778887665556799999999999876565543
No 56
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=96.38 E-value=0.00058 Score=61.64 Aligned_cols=17 Identities=82% Similarity=1.519 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCCc
Q 006814 584 TRGRGRGRGRGRGRGAN 600 (630)
Q Consensus 584 ~~~~~~~~~~~~~~~~~ 600 (630)
|||||||||||||||.+
T Consensus 101 g~grgrgrg~gr~~~~~ 117 (119)
T 1b34_A 101 GRGRGRGRGRGRGRGGP 117 (119)
T ss_dssp -----------------
T ss_pred CCcCCCCCCCCCCCCCC
Confidence 45555555666666654
No 57
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=94.59 E-value=0.042 Score=61.19 Aligned_cols=44 Identities=16% Similarity=0.233 Sum_probs=31.0
Q ss_pred CCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC
Q 006814 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENK 66 (630)
Q Consensus 10 ~~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~ 66 (630)
...+||+++||.|..... +.++..+. +.++||||+.||++-...
T Consensus 114 ~~~~rfa~~sc~~~~~g~---------~~~~~~ia----~~~~D~vlhlGD~iY~d~ 157 (527)
T 2yeq_A 114 VPQMTFAFASCQQYEHGY---------YTAYKHMA----KEKLDLVFHLGDYIYEYG 157 (527)
T ss_dssp CCCEEEEEECCCCGGGCC---------CHHHHHHT----TSCCSEEEECSCSSCCCC
T ss_pred CCCeEEEEEecCCCCCCc---------cHHHHHHH----hcCCCEEEecCCcccCCC
Confidence 367999999999863211 23454443 379999999999985543
No 58
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=94.51 E-value=0.0066 Score=54.66 Aligned_cols=16 Identities=88% Similarity=1.610 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCCCC
Q 006814 584 TRGRGRGRGRGRGRGA 599 (630)
Q Consensus 584 ~~~~~~~~~~~~~~~~ 599 (630)
|||||||||||||||+
T Consensus 97 ~~~~g~grgrgrg~gr 112 (119)
T 1b34_A 97 GRGRGRGRGRGRGRGR 112 (119)
T ss_dssp ----------------
T ss_pred CCCCCCcCCCCCCCCC
Confidence 5666666666666663
No 59
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=93.47 E-value=0.14 Score=55.96 Aligned_cols=51 Identities=12% Similarity=0.258 Sum_probs=41.0
Q ss_pred CCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhc-CCCEEEEcCCCCCCCCC
Q 006814 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK-EVDFVLLGGDLFHENKP 67 (630)
Q Consensus 10 ~~~mKILh~SD~HLG~~~~d~~r~~Ds~~tFeeil~~A~~~-~VD~VLlaGDLFd~~~P 67 (630)
...++|+++|.-+-....- .|.-|.++++.+.++ +||++|+.|.+.|...|
T Consensus 145 ~~~l~ivvAsGPyT~sdnl-------~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp 196 (460)
T 3flo_A 145 GSSLKVIVTCGPYFANDNF-------SLELLQEFIDSINNEVKPHVLIMFGPFIDITHP 196 (460)
T ss_dssp SSCEEEEEEESCCSCSSCC-------CCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCH
T ss_pred CCCcEEEEEeCCccCCCcc-------ChHHHHHHHHHHHhccCCCEEEEecCcccccCc
Confidence 3679999999988765322 256789999998885 89999999999998765
No 60
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=67.15 E-value=2.5 Score=40.63 Aligned_cols=30 Identities=13% Similarity=0.179 Sum_probs=22.8
Q ss_pred CCCcEEEeCcccccccCCeecCCCCceEEcCCCC
Q 006814 244 RFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSS 277 (630)
Q Consensus 244 ~~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS~ 277 (630)
.+.|+|+.||+|.... .... +..++.|||.
T Consensus 177 ~~~~~vv~GHth~~~~--~~~~--~~~~in~Gs~ 206 (221)
T 1g5b_A 177 KGADTFIFGHTPAVKP--LKFA--NQMYIDTGAV 206 (221)
T ss_dssp BTSSEEEECSSCCSSC--EEET--TEEECCCCHH
T ss_pred cCCCEEEECCCCCccc--eeeC--CEEEEECCCC
Confidence 4579999999999753 3333 4688999986
No 61
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=50.38 E-value=32 Score=34.15 Aligned_cols=47 Identities=17% Similarity=0.362 Sum_probs=31.3
Q ss_pred HHHHhcCCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccCCCccceeeechhhhhcccccCccccCCCCCCCCCcEEEE
Q 006814 45 SIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSI 124 (630)
Q Consensus 45 ~~A~~~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g~~p~~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~I 124 (630)
+.+.+...|+|+++| +.......+..+++.+++ ..+|++.-
T Consensus 30 ~~~~~~GtDaI~vGg----s~gvt~~~~~~~v~~ik~-----------------------------------~~~Piil~ 70 (235)
T 3w01_A 30 DAICMSQTDAIMIGG----TDDVTEDNVIHLMSKIRR-----------------------------------YPLPLVLE 70 (235)
T ss_dssp HHHHTSSCSEEEECC----SSCCCHHHHHHHHHHHTT-----------------------------------SCSCEEEE
T ss_pred HHHHHcCCCEEEECC----cCCcCHHHHHHHHHHhcC-----------------------------------cCCCEEEe
Confidence 334688899999999 222344444444444443 37899999
Q ss_pred cCCCCC
Q 006814 125 HGNHDD 130 (630)
Q Consensus 125 ~GNHD~ 130 (630)
+||++.
T Consensus 71 p~~~~~ 76 (235)
T 3w01_A 71 ISNIES 76 (235)
T ss_dssp CCCSTT
T ss_pred cCCHHH
Confidence 999854
No 62
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=45.05 E-value=9.6 Score=33.25 Aligned_cols=57 Identities=16% Similarity=0.163 Sum_probs=31.2
Q ss_pred CCCCCccEEEEEcCCCCCCCC-------CchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCC
Q 006814 7 EDIANTVRILVATDCHLGYME-------KDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFH 63 (630)
Q Consensus 7 ~~~~~~mKILh~SD~HLG~~~-------~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd 63 (630)
.....|||||++.|...-... .+....-......+++++.+.+..+|+||+-=++-+
T Consensus 15 ~~~~~m~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~ 78 (150)
T 4e7p_A 15 VPRGSHMKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPV 78 (150)
T ss_dssp -----CEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSS
T ss_pred CCCCCccEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCC
Confidence 345678999999886442110 000000111234567778888899999998766644
No 63
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=43.47 E-value=41 Score=29.18 Aligned_cols=19 Identities=53% Similarity=0.788 Sum_probs=14.0
Q ss_pred HHHHHHHHHhcCCCEEEEc
Q 006814 40 FEEICSIAEQKEVDFVLLG 58 (630)
Q Consensus 40 Feeil~~A~~~~VD~VLla 58 (630)
.++|++.|.++++|+|+++
T Consensus 98 ~~~I~~~a~~~~~dliV~G 116 (150)
T 3tnj_A 98 REEIIRIAEQENVDLIVVG 116 (150)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEe
Confidence 3667777777778877776
No 64
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=43.30 E-value=31 Score=34.09 Aligned_cols=48 Identities=17% Similarity=0.297 Sum_probs=31.7
Q ss_pred HHHHHhcCCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccCCCccceeeechhhhhcccccCccccCCCCCCCCCcEEE
Q 006814 44 CSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFS 123 (630)
Q Consensus 44 l~~A~~~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g~~p~~~~~lsd~~~~f~~~~~~lny~d~n~~~~iPVf~ 123 (630)
++.+.+.+.|+|+++| +.....+.+..+++.+++ ..+|++.
T Consensus 24 ~~~~~~~GtD~i~vGG----s~gvt~~~~~~~v~~ik~-----------------------------------~~~Pvvl 64 (228)
T 3vzx_A 24 LEILCESGTDAVIIGG----SDGVTEDNVLRMMSKVRR-----------------------------------FLVPCVL 64 (228)
T ss_dssp HHHHHTSSCSEEEECC----CSCCCHHHHHHHHHHHTT-----------------------------------SSSCEEE
T ss_pred HHHHHHcCCCEEEECC----cCCCCHHHHHHHHHHhhc-----------------------------------cCCCEEE
Confidence 3344678899999999 332344444444444443 3789999
Q ss_pred EcCCCCC
Q 006814 124 IHGNHDD 130 (630)
Q Consensus 124 I~GNHD~ 130 (630)
-+||++.
T Consensus 65 fp~~~~~ 71 (228)
T 3vzx_A 65 EVSAIEA 71 (228)
T ss_dssp ECSCGGG
T ss_pred eCCCHHH
Confidence 9999753
No 65
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=42.49 E-value=33 Score=32.30 Aligned_cols=28 Identities=21% Similarity=0.131 Sum_probs=20.5
Q ss_pred hcHHHHHHHHHHHHHhc-CCCEEEEcCCC
Q 006814 34 HDSFEAFEEICSIAEQK-EVDFVLLGGDL 61 (630)
Q Consensus 34 ~Ds~~tFeeil~~A~~~-~VD~VLlaGDL 61 (630)
.|....+.+.+..+.++ ++|+||.+|=+
T Consensus 63 ~Dd~~~I~~al~~a~~~~~~DlVittGG~ 91 (178)
T 2pjk_A 63 PDDKIKILKAFTDALSIDEVDVIISTGGT 91 (178)
T ss_dssp CSCHHHHHHHHHHHHTCTTCCEEEEESCC
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 34456677777777665 59999999966
No 66
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=40.82 E-value=60 Score=28.53 Aligned_cols=12 Identities=17% Similarity=0.390 Sum_probs=9.9
Q ss_pred CCCcEEEEcCCC
Q 006814 117 VGLPVFSIHGNH 128 (630)
Q Consensus 117 ~~iPVf~I~GNH 128 (630)
..+||++++..|
T Consensus 150 ~~~pVlvv~~~~ 161 (162)
T 1mjh_A 150 SNKPVLVVKRKN 161 (162)
T ss_dssp CCSCEEEECCCC
T ss_pred CCCCEEEEeCCC
Confidence 579999998765
No 67
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=38.33 E-value=49 Score=28.32 Aligned_cols=21 Identities=24% Similarity=0.339 Sum_probs=17.5
Q ss_pred HHHHHHHHHhcCCCEEEEcCC
Q 006814 40 FEEICSIAEQKEVDFVLLGGD 60 (630)
Q Consensus 40 Feeil~~A~~~~VD~VLlaGD 60 (630)
-+.|++.|.+.++|+|+++--
T Consensus 91 ~~~I~~~a~~~~~dliV~G~~ 111 (141)
T 1jmv_A 91 GQVLSDAIEQYDVDLLVTGHH 111 (141)
T ss_dssp HHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEeCC
Confidence 478889999999999998754
No 68
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=33.07 E-value=50 Score=28.26 Aligned_cols=21 Identities=19% Similarity=0.401 Sum_probs=16.8
Q ss_pred HHHHHHHHHHhcCCCEEEEcC
Q 006814 39 AFEEICSIAEQKEVDFVLLGG 59 (630)
Q Consensus 39 tFeeil~~A~~~~VD~VLlaG 59 (630)
..++|++.|.+.++|+|+++-
T Consensus 94 ~~~~I~~~a~~~~~dliV~G~ 114 (143)
T 3fdx_A 94 PKDKILALAKSLPADLVIIAS 114 (143)
T ss_dssp HHHHHHHHHHHTTCSEEEEES
T ss_pred hHHHHHHHHHHhCCCEEEEeC
Confidence 457788888888889888875
No 69
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=32.86 E-value=86 Score=28.91 Aligned_cols=24 Identities=25% Similarity=0.313 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHhcCCCEEEEcCCC
Q 006814 38 EAFEEICSIAEQKEVDFVLLGGDL 61 (630)
Q Consensus 38 ~tFeeil~~A~~~~VD~VLlaGDL 61 (630)
..+.+.+..+.+.++|+||.+|=+
T Consensus 53 ~~i~~al~~a~~~~~DlVittGG~ 76 (164)
T 3pzy_A 53 SPVGEALRKAIDDDVDVILTSGGT 76 (164)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCC
Confidence 667777777766689999999976
No 70
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=28.63 E-value=36 Score=29.88 Aligned_cols=66 Identities=21% Similarity=0.330 Sum_probs=36.4
Q ss_pred CCccEEEEEcCCCCCCCCCchhc---hh---cHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHHHHHHHHHHh
Q 006814 10 ANTVRILVATDCHLGYMEKDEIR---RH---DSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRR 81 (630)
Q Consensus 10 ~~~mKILh~SD~HLG~~~~d~~r---~~---Ds~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~ 81 (630)
...||||+.=|...-...-.... +- .....-++.++.+.++.+|+||+ |+ +-|...-+ .+.+.+++
T Consensus 6 ~r~~rILiVdD~~~~~~~l~~~L~~~G~~v~~~a~~g~eAl~~~~~~~~Dlvll--Di---~mP~~~G~-el~~~lr~ 77 (123)
T 2lpm_A 6 ERRLRVLVVEDESMIAMLIEDTLCELGHEVAATASRMQEALDIARKGQFDIAII--DV---NLDGEPSY-PVADILAE 77 (123)
T ss_dssp CCCCCEEEESSSTTTSHHHHHHHHHHCCCCCBCSCCHHHHHHHHHHCCSSEEEE--CS---SSSSCCSH-HHHHHHHH
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCCCEEEE--ec---CCCCCCHH-HHHHHHHc
Confidence 34689999999876432100000 00 01122467778888999999988 43 44544322 24444543
No 71
>3men_A Acetylpolyamine aminohydrolase; histone deacetylase; 2.20A {Burkholderia pseudomallei 1710B}
Probab=26.27 E-value=1.4e+02 Score=31.33 Aligned_cols=48 Identities=10% Similarity=0.073 Sum_probs=32.2
Q ss_pred hcHHHHHHHHHHHHHhcCCCEEEEc-------CCCCCCCCCChHHHHHHHHHHHh
Q 006814 34 HDSFEAFEEICSIAEQKEVDFVLLG-------GDLFHENKPSRSTLVKAIEILRR 81 (630)
Q Consensus 34 ~Ds~~tFeeil~~A~~~~VD~VLla-------GDLFd~~~Ps~~tl~~~~~~Lr~ 81 (630)
.+...+|++++..+.+.+||+||+. ||=+-.-+-+.....++.+.|++
T Consensus 274 ~~yl~~~~~~l~~l~~f~PdlIvvsaG~Da~~~Dplg~l~lt~~~~~~~~~~l~~ 328 (362)
T 3men_A 274 AAFFERVDDALRELRRFAPDALVLSLGFDVYRDDPQSQVAVTTDGFGRLGHLIGA 328 (362)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEEECSTTBTTCTTCCBCBCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEECcccCcCCCCCCCccCCHHHHHHHHHHHHh
Confidence 3445689999998889999999973 44333334466666666555553
No 72
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=26.18 E-value=80 Score=27.99 Aligned_cols=16 Identities=19% Similarity=0.318 Sum_probs=11.7
Q ss_pred CCCCcEEEEcCCCCCC
Q 006814 116 NVGLPVFSIHGNHDDP 131 (630)
Q Consensus 116 ~~~iPVf~I~GNHD~p 131 (630)
+..+||++++...+..
T Consensus 146 ~~~~PVlvv~~~~~~~ 161 (170)
T 2dum_A 146 KTKKPVLIIKEVDENE 161 (170)
T ss_dssp HCSSCEEEECCCCCC-
T ss_pred hCCCCEEEEccCCccc
Confidence 3579999999776654
No 73
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=25.61 E-value=1.7e+02 Score=27.19 Aligned_cols=27 Identities=19% Similarity=0.213 Sum_probs=19.1
Q ss_pred cHHHHHHHHHHHHHh-cCCCEEEEcCCC
Q 006814 35 DSFEAFEEICSIAEQ-KEVDFVLLGGDL 61 (630)
Q Consensus 35 Ds~~tFeeil~~A~~-~~VD~VLlaGDL 61 (630)
|....+.+.+..+.+ .++|+||.+|=+
T Consensus 51 Dd~~~I~~~l~~~~~~~~~DlVittGG~ 78 (178)
T 2pbq_A 51 DERDLIEKTLIELADEKGCSLILTTGGT 78 (178)
T ss_dssp SCHHHHHHHHHHHHHTSCCSEEEEESCC
T ss_pred CCHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 334566666666665 379999999976
No 74
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=25.45 E-value=1.3e+02 Score=24.91 Aligned_cols=54 Identities=15% Similarity=-0.045 Sum_probs=29.3
Q ss_pred CCccEEEEEcCCCCCCCC-Cchhc----hhcHHHHHHHHHHHHHhcCCCEEEEcCCCCC
Q 006814 10 ANTVRILVATDCHLGYME-KDEIR----RHDSFEAFEEICSIAEQKEVDFVLLGGDLFH 63 (630)
Q Consensus 10 ~~~mKILh~SD~HLG~~~-~d~~r----~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd 63 (630)
..+||||++.|...-... ..... .-......+++++.+.+..+|+||+--++-+
T Consensus 5 ~~~~~ilivdd~~~~~~~l~~~L~~~~~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~ 63 (137)
T 3hdg_A 5 EVALKILIVEDDTDAREWLSTIISNHFPEVWSAGDGEEGERLFGLHAPDVIITDIRMPK 63 (137)
T ss_dssp --CCCEEEECSCHHHHHHHHHHHHTTCSCEEEESSHHHHHHHHHHHCCSEEEECSSCSS
T ss_pred ccccEEEEEeCCHHHHHHHHHHHHhcCcEEEEECCHHHHHHHHhccCCCEEEEeCCCCC
Confidence 356899998885432110 00000 0001123466777778889999999766644
No 75
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=25.08 E-value=1.2e+02 Score=25.32 Aligned_cols=25 Identities=20% Similarity=0.262 Sum_probs=17.7
Q ss_pred HHHHHHHHHHhcCCCEEEEcCCCCC
Q 006814 39 AFEEICSIAEQKEVDFVLLGGDLFH 63 (630)
Q Consensus 39 tFeeil~~A~~~~VD~VLlaGDLFd 63 (630)
..+++++.+.+..+|+||+-=++-+
T Consensus 34 ~~~~a~~~~~~~~~dlvi~D~~l~~ 58 (140)
T 3n53_A 34 NEKEALEQIDHHHPDLVILDMDIIG 58 (140)
T ss_dssp SHHHHHHHHHHHCCSEEEEETTC--
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 3567777778889999999655543
No 76
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=24.93 E-value=2.3e+02 Score=27.50 Aligned_cols=55 Identities=16% Similarity=0.309 Sum_probs=38.5
Q ss_pred CchhchhcHHHHHHHHHHHHHhcCCCEEEEcC-CCCCCCCCChHHHHHHHHHHHhhc
Q 006814 28 KDEIRRHDSFEAFEEICSIAEQKEVDFVLLGG-DLFHENKPSRSTLVKAIEILRRHC 83 (630)
Q Consensus 28 ~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaG-DLFd~~~Ps~~tl~~~~~~Lr~l~ 83 (630)
.++..+......+++.++.|.+.++..|++.| +.+. .......+.++.+.|++++
T Consensus 98 ~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~-~~~~~~~~~~~~~~l~~l~ 153 (295)
T 3cqj_A 98 EDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYY-QEANNETRRRFRDGLKESV 153 (295)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSCSS-SCCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCc-CcCHHHHHHHHHHHHHHHH
Confidence 34555566788899999999999999998864 3321 2234556677777777764
No 77
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=23.93 E-value=4.2e+02 Score=26.48 Aligned_cols=66 Identities=32% Similarity=0.376 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChHHHHHHHHHHHhhccCCCccceeeechhhhhcccccCccccCCCCC
Q 006814 36 SFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHF 115 (630)
Q Consensus 36 s~~tFeeil~~A~~~~VD~VLlaGDLFd~~~Ps~~tl~~~~~~Lr~l~~g~~p~~~~~lsd~~~~f~~~~~~lny~d~n~ 115 (630)
.-.+-..++++|++.++|||++.+ .+|...--..+-++|.
T Consensus 49 ~~~~~~~~~~~~~~~~pDfvI~is-----PN~a~PGP~~ARE~l~----------------------------------- 88 (283)
T 1qv9_A 49 VEAAVEMALDIAEDFEPDFIVYGG-----PNPAAPGPSKAREMLA----------------------------------- 88 (283)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEEC-----SCTTSHHHHHHHHHHH-----------------------------------
T ss_pred HHHHHHHhhhhhhhcCCCEEEEEC-----CCCCCCCchHHHHHHH-----------------------------------
Confidence 334566678889999999999876 4444443445666664
Q ss_pred CCCCcEEEEcCCCCCCCCCCcchHHHhhhhCCc
Q 006814 116 NVGLPVFSIHGNHDDPAGVDNLSAVDILSACNL 148 (630)
Q Consensus 116 ~~~iPVf~I~GNHD~p~~~~~ls~ldiL~~~gl 148 (630)
..++|+++|. |.|... .-+.|...|+
T Consensus 89 ~~~iP~IvI~---D~p~~K----~kd~l~~~g~ 114 (283)
T 1qv9_A 89 DSEYPAVIIG---DAPGLK----VKDEMEEQGL 114 (283)
T ss_dssp TSSSCEEEEE---EGGGGG----GHHHHHHTTC
T ss_pred hCCCCEEEEc---CCcchh----hHHHHHhcCC
Confidence 3588999886 556432 3367777774
No 78
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=23.77 E-value=1.2e+02 Score=27.79 Aligned_cols=27 Identities=15% Similarity=0.384 Sum_probs=19.8
Q ss_pred cHHHHHHHHHHHHHhcCCCEEEEcCCC
Q 006814 35 DSFEAFEEICSIAEQKEVDFVLLGGDL 61 (630)
Q Consensus 35 Ds~~tFeeil~~A~~~~VD~VLlaGDL 61 (630)
|....+.+.+..+.+.++|+||.+|=+
T Consensus 53 Dd~~~I~~~l~~a~~~~~DlVittGG~ 79 (167)
T 2g2c_A 53 EGYDTVVEAIATALKQGARFIITAGGT 79 (167)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEESCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 335566666766766569999999976
No 79
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=23.61 E-value=1.6e+02 Score=24.21 Aligned_cols=54 Identities=7% Similarity=-0.109 Sum_probs=28.0
Q ss_pred CCccEEEEEcCCCCCCCC-Cchhc----hhcHHHHHHHHHHHHHhcCCCEEEEcCCCCC
Q 006814 10 ANTVRILVATDCHLGYME-KDEIR----RHDSFEAFEEICSIAEQKEVDFVLLGGDLFH 63 (630)
Q Consensus 10 ~~~mKILh~SD~HLG~~~-~d~~r----~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd 63 (630)
...+|||++.|...-... ..-.. .-......+++++.+.+..+|+||+-=++-+
T Consensus 5 ~~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~ 63 (130)
T 3eod_A 5 LVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPR 63 (130)
T ss_dssp TTTCEEEEECSCHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHTTCCCSEEEECCC---
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHHhCCceEEEeCCHHHHHHHHhcCCCCEEEEecCCCC
Confidence 456799988875432110 00000 0001123466777778889999998655543
No 80
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=22.89 E-value=98 Score=29.34 Aligned_cols=27 Identities=19% Similarity=0.081 Sum_probs=20.1
Q ss_pred cHHHHHHHHHHHHHhcCCCEEEEcCCC
Q 006814 35 DSFEAFEEICSIAEQKEVDFVLLGGDL 61 (630)
Q Consensus 35 Ds~~tFeeil~~A~~~~VD~VLlaGDL 61 (630)
|....+.+.+..+...++|+||.+|=+
T Consensus 73 Dd~~~I~~al~~a~~~~~DlVIttGGt 99 (185)
T 3rfq_A 73 ADEVDIRNALNTAVIGGVDLVVSVGGT 99 (185)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEESCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 445666666666665789999999977
No 81
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=22.46 E-value=1.1e+02 Score=26.06 Aligned_cols=19 Identities=26% Similarity=0.501 Sum_probs=11.7
Q ss_pred HHHHHH-HHHhcCCCEEEEc
Q 006814 40 FEEICS-IAEQKEVDFVLLG 58 (630)
Q Consensus 40 Feeil~-~A~~~~VD~VLla 58 (630)
.++|++ .|.+.++|+|+++
T Consensus 96 ~~~I~~~~a~~~~~dliV~G 115 (146)
T 3s3t_A 96 KHTIEDYAKQHPEIDLIVLG 115 (146)
T ss_dssp HHHHHHHHHHSTTCCEEEEE
T ss_pred HHHHHHHHHhhcCCCEEEEC
Confidence 355666 6666666666665
No 82
>4gqb_C Histone H4 peptide; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=22.01 E-value=37 Score=21.50 Aligned_cols=6 Identities=67% Similarity=1.204 Sum_probs=3.3
Q ss_pred CCCCCC
Q 006814 583 STRGRG 588 (630)
Q Consensus 583 ~~~~~~ 588 (630)
||||+|
T Consensus 2 sgrgkg 7 (26)
T 4gqb_C 2 SGRGKG 7 (26)
T ss_pred CCCCcC
Confidence 466654
No 83
>1ub1_A MECP2, attachment region binding protein; chicken methyl-CPG-binding protein 2 (cmecp2), MAR-binding protein (ARBP), spectroscopy; NMR {Gallus gallus} SCOP: d.10.1.3
Probab=21.97 E-value=64 Score=29.25 Aligned_cols=8 Identities=63% Similarity=1.178 Sum_probs=3.0
Q ss_pred CCCCCCCC
Q 006814 583 STRGRGRG 590 (630)
Q Consensus 583 ~~~~~~~~ 590 (630)
.++|||||
T Consensus 120 ~~~~~~~~ 127 (133)
T 1ub1_A 120 PGSGRGRG 127 (133)
T ss_dssp CCCCCCCC
T ss_pred CCCCCCCC
Confidence 34433333
No 84
>3bbo_N Ribosomal protein L15; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=21.75 E-value=91 Score=31.34 Aligned_cols=11 Identities=0% Similarity=0.148 Sum_probs=4.0
Q ss_pred ccccccCcccc
Q 006814 547 DTTQISDTKSA 557 (630)
Q Consensus 547 ~~~~~~~~~~~ 557 (630)
..|.|..-+++
T Consensus 63 ~~m~L~~L~p~ 73 (257)
T 3bbo_N 63 NVFRLDNLGPQ 73 (257)
T ss_dssp --CCCSSSCCC
T ss_pred CceecccCcCC
Confidence 34554444433
No 85
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=21.52 E-value=1.9e+02 Score=24.38 Aligned_cols=25 Identities=12% Similarity=0.234 Sum_probs=21.0
Q ss_pred hcHHHHHHHHHHHHHhcCCCEEEEc
Q 006814 34 HDSFEAFEEICSIAEQKEVDFVLLG 58 (630)
Q Consensus 34 ~Ds~~tFeeil~~A~~~~VD~VLla 58 (630)
.+.-..++++.+++.+++|+.|+++
T Consensus 34 ~~~~~~~~~l~~li~e~~v~~iVvG 58 (98)
T 1iv0_A 34 KTLEEDVEALLDFVRREGLGKLVVG 58 (98)
T ss_dssp CCHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred cCcHHHHHHHHHHHHHcCCCEEEEe
Confidence 3455678999999999999999987
No 86
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=21.34 E-value=2e+02 Score=24.53 Aligned_cols=57 Identities=12% Similarity=0.092 Sum_probs=32.9
Q ss_pred CCCCCCccEEEEEcCCCCCCCC------CchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCC
Q 006814 6 REDIANTVRILVATDCHLGYME------KDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFH 63 (630)
Q Consensus 6 ~~~~~~~mKILh~SD~HLG~~~------~d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd 63 (630)
......+++||++.|...-... .... .-......+++++.+.+..+|+||+-=++-+
T Consensus 8 ~~~~~~~~~ILivdd~~~~~~~l~~~L~~~g~-~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~ 70 (153)
T 3hv2_A 8 VATVTRRPEILLVDSQEVILQRLQQLLSPLPY-TLHFARDATQALQLLASREVDLVISAAHLPQ 70 (153)
T ss_dssp CCCCCSCCEEEEECSCHHHHHHHHHHHTTSSC-EEEEESSHHHHHHHHHHSCCSEEEEESCCSS
T ss_pred hhhccCCceEEEECCCHHHHHHHHHHhcccCc-EEEEECCHHHHHHHHHcCCCCEEEEeCCCCc
Confidence 3344567899999886432110 0000 0001223567777778889999999666643
No 87
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=21.13 E-value=93 Score=26.73 Aligned_cols=22 Identities=18% Similarity=0.360 Sum_probs=19.4
Q ss_pred HHHHHHHHHhcCCCEEEEcCCC
Q 006814 40 FEEICSIAEQKEVDFVLLGGDL 61 (630)
Q Consensus 40 Feeil~~A~~~~VD~VLlaGDL 61 (630)
+++++...+..++-+|++|.|.
T Consensus 26 ~~~v~kai~~gka~lViiA~D~ 47 (110)
T 3cpq_A 26 SKRTIKFVKHGEGKLVVLAGNI 47 (110)
T ss_dssp HHHHHHHHHTTCCSEEEECTTC
T ss_pred HHHHHHHHHcCCceEEEEeCCC
Confidence 5678888888899999999998
No 88
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=20.97 E-value=83 Score=30.97 Aligned_cols=31 Identities=19% Similarity=-0.024 Sum_probs=20.9
Q ss_pred CCcEEEeCcccccccCCeecCCCCceEEcCCCC
Q 006814 245 FLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSS 277 (630)
Q Consensus 245 ~~DyVa~GH~H~~~i~p~~~~~~~~~I~yPGS~ 277 (630)
+.++|+.||.|.... ......+...+.||+.
T Consensus 196 g~~~vvfGHt~~~~~--~~~~~~~~i~IDtG~~ 226 (262)
T 2qjc_A 196 GPETVVFGHDARRGL--QEQYKPLAIGLDSRCV 226 (262)
T ss_dssp CSSEEEECCCGGGCC--BCTTTTTEEECCCBGG
T ss_pred CCCEEEECCCccccc--cccCCCCEEEeeCccc
Confidence 578999999998643 2222114567888885
No 89
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=20.85 E-value=1.2e+02 Score=29.36 Aligned_cols=53 Identities=13% Similarity=0.033 Sum_probs=37.8
Q ss_pred chhchhcHHHHHHHHHHHHHhcCCCEEEE-cCCCCCCCCCChHHHHHHHHHHHhhc
Q 006814 29 DEIRRHDSFEAFEEICSIAEQKEVDFVLL-GGDLFHENKPSRSTLVKAIEILRRHC 83 (630)
Q Consensus 29 d~~r~~Ds~~tFeeil~~A~~~~VD~VLl-aGDLFd~~~Ps~~tl~~~~~~Lr~l~ 83 (630)
++..+....+.+++.++.|.+.+++.|++ +| .....+....+.++.+.|++++
T Consensus 84 ~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g--~~~~~~~~~~~~~~~~~l~~l~ 137 (269)
T 3ngf_A 84 ISGREQEFRDNVDIALHYALALDCRTLHAMSG--ITEGLDRKACEETFIENFRYAA 137 (269)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHTTCCEEECCBC--BCTTSCHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHcCCCEEEEccC--CCCCCCHHHHHHHHHHHHHHHH
Confidence 44455667788999999999999998877 67 3333334456667777777764
No 90
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=20.68 E-value=1.8e+02 Score=23.72 Aligned_cols=19 Identities=26% Similarity=0.392 Sum_probs=15.0
Q ss_pred HHHHHHHHHhcCCCEEEEc
Q 006814 40 FEEICSIAEQKEVDFVLLG 58 (630)
Q Consensus 40 Feeil~~A~~~~VD~VLla 58 (630)
.+++++.+.+..+|+||+-
T Consensus 35 ~~~al~~~~~~~~dlii~D 53 (120)
T 3f6p_A 35 GNEAVEMVEELQPDLILLD 53 (120)
T ss_dssp HHHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHHHhhCCCCEEEEe
Confidence 4667777788899999883
No 91
>3q9b_A Acetylpolyamine amidohydrolase; HDAC, polyamines, arginase fold, deacetylase, hydrolase-HYDR inhibitor complex; HET: B3N; 2.25A {Mycoplana ramosa} PDB: 3q9f_A* 3q9c_A* 3q9e_A*
Probab=20.45 E-value=1.5e+02 Score=30.83 Aligned_cols=48 Identities=8% Similarity=-0.045 Sum_probs=31.9
Q ss_pred hcHHHHHHHHHHHHHhcCCCEEEEc-------CCCCCCCCCChHHHHHHHHHHHh
Q 006814 34 HDSFEAFEEICSIAEQKEVDFVLLG-------GDLFHENKPSRSTLVKAIEILRR 81 (630)
Q Consensus 34 ~Ds~~tFeeil~~A~~~~VD~VLla-------GDLFd~~~Ps~~tl~~~~~~Lr~ 81 (630)
.+...+|++++..+.+.+||+||+. ||=+-.-+-+.....++.+.|+.
T Consensus 256 ~~y~~~~~~~l~~l~~f~Pd~ivvsaG~D~~~~Dplg~~~lt~~~~~~~~~~l~~ 310 (341)
T 3q9b_A 256 SVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAA 310 (341)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCEEEEECCTTBTTCTTCCCBBCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhCCCEEEEeCCccccCCCCCCCccCCHHHHHHHHHHHHH
Confidence 3445689999998889999999873 44333333455666666666554
No 92
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=20.38 E-value=2.2e+02 Score=24.20 Aligned_cols=53 Identities=15% Similarity=0.099 Sum_probs=30.2
Q ss_pred CccEEEEEcCCCCCCCC------C-chhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCC
Q 006814 11 NTVRILVATDCHLGYME------K-DEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFH 63 (630)
Q Consensus 11 ~~mKILh~SD~HLG~~~------~-d~~r~~Ds~~tFeeil~~A~~~~VD~VLlaGDLFd 63 (630)
.++|||++.|...-... . ....-.......+++++.+.+..+|+||+--++-+
T Consensus 4 ~~~~ILivdd~~~~~~~l~~~L~~~~~~~v~~~~~~~~~a~~~l~~~~~dlii~D~~l~~ 63 (153)
T 3cz5_A 4 STARIMLVDDHPIVREGYRRLIERRPGYAVVAEAADAGEAYRLYRETTPDIVVMDLTLPG 63 (153)
T ss_dssp CCEEEEEECSCHHHHHHHHHHHTTSTTEEEEEEESSHHHHHHHHHTTCCSEEEECSCCSS
T ss_pred cccEEEEECCcHHHHHHHHHHHhhCCCcEEEEEeCCHHHHHHHHhcCCCCEEEEecCCCC
Confidence 46899988886432110 0 00000001223567777788889999999666643
Done!