Your job contains 1 sequence.
>006819
MSSSDSPQSIHFRCKKPITAKPKPEMSNQNPNPTQLASKTPEKQPSRRARNSRMALSLKE
IRKAAQTNPQQPPKDQIESAGKQISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDA
VIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCM
KPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDFLKDHPEGDEIPEETLPEPFNR
SRSDLQLNMVKKSTSLTPADSPTDASVEQQQVSSPTCQNSKLLNIVKAPSISMVTGTSAS
ASDNQQPIVASHFSSRRHFSQKFVNSLAEKKKAERISSGVSIEPSTTPALEPCLRKISSI
EETCSTAAISAVELSSKSTSKENCLTYCASPTRLSQSCPPVTPVKEIDPMESKVSYPIKV
DSEQSTPAKLVSTPARLMIGTPALHQPKRCYMTPENVSASSPNKLTRRPPHSRTLKSLKF
DTPVKNATVEHKLNEDISVDGDVLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMI
ASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWIS
EKLSSCGDLLVCINKMTCPESIRARLEESK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006819
(630 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2102460 - symbol:CDT1B "homolog of yeast CDT1 ... 388 2.4e-66 3
TAIR|locus:2042541 - symbol:CDT1A "homolog of yeast CDT1 ... 578 4.2e-56 1
RGD|1309211 - symbol:Cdt1 "chromatin licensing and DNA re... 166 9.2e-15 2
UNIPROTKB|Q9H211 - symbol:CDT1 "DNA replication factor Cd... 148 4.0e-13 2
UNIPROTKB|F1S6K4 - symbol:CDT1 "Uncharacterized protein" ... 137 2.5e-12 3
UNIPROTKB|F1MCJ1 - symbol:CDT1 "Uncharacterized protein" ... 142 5.5e-12 2
MGI|MGI:1914427 - symbol:Cdt1 "chromatin licensing and DN... 138 8.6e-12 2
ZFIN|ZDB-GENE-070111-1 - symbol:cdt1 "chromatin licensing... 134 5.2e-11 2
FB|FBgn0000996 - symbol:dup "double parked" species:7227 ... 117 4.1e-10 2
UNIPROTKB|I3L5Z3 - symbol:PRG4 "Uncharacterized protein" ... 100 2.5e-05 2
UNIPROTKB|F1MSQ6 - symbol:NEFH "Uncharacterized protein" ... 115 0.00022 2
FB|FBgn0030266 - symbol:CG11122 species:7227 "Drosophila ... 126 0.00038 2
SGD|S000001458 - symbol:FLO11 "GPI-anchored cell surface ... 126 0.00054 1
POMBASE|SPAPB15E9.01c - symbol:SPAPB15E9.01c "sequence or... 124 0.00064 1
MGI|MGI:2664670 - symbol:Pkd1l3 "polycystic kidney diseas... 118 0.00099 2
>TAIR|locus:2102460 [details] [associations]
symbol:CDT1B "homolog of yeast CDT1 B homolog of yeast
CDT1 B" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0004693 "cyclin-dependent protein
serine/threonine kinase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=IMP] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048229 "gametophyte development" evidence=IMP] [GO:0051276
"chromosome organization" evidence=IMP] [GO:0070182 "DNA polymerase
binding" evidence=IPI] GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006260 GO:GO:0009658 GO:GO:0051276
GO:GO:0048229 GO:GO:0004693 HOGENOM:HOG000240675 KO:K10727
InterPro:IPR014939 Pfam:PF08839 SMART:SM01075 EMBL:AJ421409
EMBL:AL138650 EMBL:BT029185 IPI:IPI00541210 PIR:T47630
RefSeq:NP_191031.1 UniGene:At.35086 ProteinModelPortal:Q9M1S9
SMR:Q9M1S9 STRING:Q9M1S9 EnsemblPlants:AT3G54710.1 GeneID:824636
KEGG:ath:AT3G54710 TAIR:At3g54710 eggNOG:NOG312810
InParanoid:Q9M1S9 OMA:ANQINIT PhylomeDB:Q9M1S9
ProtClustDB:CLSN2915663 Genevestigator:Q9M1S9 Uniprot:Q9M1S9
Length = 486
Score = 388 (141.6 bits), Expect = 2.4e-66, Sum P(3) = 2.4e-66
Identities = 86/172 (50%), Positives = 114/172 (66%)
Query: 74 KDQIESAGKQI-SASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSP 132
K I++ +QI S+SP +S + KLP ++ L E F+ LD IRLLKLK SS
Sbjct: 23 KTPIKTVKRQIFSSSPKPESVI--------KLPERFEILEEFFNGLDTAIRLLKLKGSST 74
Query: 133 TFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADA 192
T+ +ICPKIE LT+R FS HLAQ+K I PE I++K+VL F E T CMKP LH+ +N DA
Sbjct: 75 TYANICPKIEYLTNRIFSYDHLAQMKHIYPEAIELKRVLKFVEDTCCMKPRLHIKLNTDA 134
Query: 193 IECDGKSKCNSKNLNLRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRSRSD 244
I + + C +K + LR VF ++L+DF K HP+ DEIP+E LPEPFN + D
Sbjct: 135 IVVED-TICGTKYMELRKVFHSKLVDFRKAHPK-DEIPKELLPEPFNSPQRD 184
Score = 291 (107.5 bits), Expect = 2.4e-66, Sum P(3) = 2.4e-66
Identities = 70/161 (43%), Positives = 103/161 (63%)
Query: 469 PPHSRTLKSLKFDTPVKNATVEHKLNEDISVDGDVLDILPENLIQSIREKERKFMEERDP 528
P S +L+ +T VK+ +E + +GD ++L+QS+ E+ + E+ +
Sbjct: 333 PSRSLNFDTLEEETIVKDDISNESGDEKSNYEGDNASD-DDSLLQSMIERPKTEPEKHN- 390
Query: 529 AISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREVEEQM 588
LP+L N+IH +F S R+VITKEEL++KII++ + ITDRREVEEQ+
Sbjct: 391 --------------LPQLVNLIHRVFHSTNRTVITKEELLYKIIANQINITDRREVEEQL 436
Query: 589 NLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARLEES 629
+LML+LVP+WISE +S GDLLV INKM+ E++RARLEE+
Sbjct: 437 SLMLQLVPDWISETKASSGDLLVRINKMSTAETVRARLEEA 477
Score = 132 (51.5 bits), Expect = 3.5e-47, Sum P(2) = 3.5e-47
Identities = 46/130 (35%), Positives = 66/130 (50%)
Query: 396 QSCPPVTPVKEIDPMESK-VSYPIKVDSEQSTPAKLVSTPARLMIGTPALHQPKRCY-MT 453
Q V P + +ES+ V P+K + STP+K +STP RLM TP L KRC +T
Sbjct: 216 QDVNKVIPDSTLSHIESRIVETPVK---DLSTPSKDLSTPIRLMSATPTLQLSKRCIELT 272
Query: 454 PE---NVSASSPNKLTRRPPHSRTLKSLKFDTPVKNATVEHKLNEDISVDGDVLDILPEN 510
PE + S S N L R P SR SL FDT ++A + + + G ++ +
Sbjct: 273 PEGGDDNSLRSTNSLARGP--SR---SLNFDTFEEDAIEKDDIGNESDDKG--INYEEDG 325
Query: 511 LIQSIREKER 520
L+QS++ R
Sbjct: 326 LLQSVKGPSR 335
Score = 40 (19.1 bits), Expect = 2.4e-66, Sum P(3) = 2.4e-66
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 357 ISSIEETCSTAAISAVELSSKSTSKENCLTYCASPT-RLSQSCPPVTP 403
+S IE + + SK S L A+PT +LS+ C +TP
Sbjct: 227 LSHIESRIVETPVKDLSTPSKDLSTPIRLM-SATPTLQLSKRCIELTP 273
Score = 39 (18.8 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 7 PQSIHFRCKKPITAKPKPEMSNQNPN---PTQLASKTPEKQPSRR 48
P S + I P ++S + + P +L S TP Q S+R
Sbjct: 223 PDSTLSHIESRIVETPVKDLSTPSKDLSTPIRLMSATPTLQLSKR 267
>TAIR|locus:2042541 [details] [associations]
symbol:CDT1A "homolog of yeast CDT1 A" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0004693 "cyclin-dependent protein
serine/threonine kinase activity" evidence=ISS] [GO:0006260 "DNA
replication" evidence=IMP] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0009658 "chloroplast organization" evidence=IMP] [GO:0006084
"acetyl-CoA metabolic process" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006270 "DNA
replication initiation" evidence=RCA] [GO:0006275 "regulation of
DNA replication" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010389 "regulation of G2/M transition of mitotic
cell cycle" evidence=RCA] [GO:0016458 "gene silencing"
evidence=RCA] [GO:0016572 "histone phosphorylation" evidence=RCA]
[GO:0034968 "histone lysine methylation" evidence=RCA] [GO:0051567
"histone H3-K9 methylation" evidence=RCA] [GO:0051726 "regulation
of cell cycle" evidence=RCA] [GO:0048229 "gametophyte development"
evidence=IMP] [GO:0051276 "chromosome organization" evidence=IMP]
[GO:0070182 "DNA polymerase binding" evidence=IPI] GO:GO:0005634
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006260
GO:GO:0009658 EMBL:AC006593 GO:GO:0051276 GO:GO:0048229
GO:GO:0004693 EMBL:AJ421408 EMBL:AY131998 IPI:IPI00547452
PIR:F84718 RefSeq:NP_180685.1 UniGene:At.38242
ProteinModelPortal:Q9SJW9 SMR:Q9SJW9 STRING:Q9SJW9 PaxDb:Q9SJW9
PRIDE:Q9SJW9 EnsemblPlants:AT2G31270.1 GeneID:817684
KEGG:ath:AT2G31270 TAIR:At2g31270 eggNOG:NOG292428
HOGENOM:HOG000240675 InParanoid:Q9SJW9 KO:K10727 OMA:FASTPAR
PhylomeDB:Q9SJW9 ProtClustDB:CLSN2912947 Genevestigator:Q9SJW9
InterPro:IPR014939 Pfam:PF08839 SMART:SM01075 Uniprot:Q9SJW9
Length = 571
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 165/418 (39%), Positives = 232/418 (55%)
Query: 1 MSSSDSPQSIHFRCKKPITA-KPKPEMSNQNPNPTQLASKTPEKQPSR---RARNSRMAL 56
MS+ S +SI F+ KK + P + NPNP+ +A TPEK R+RN +AL
Sbjct: 1 MSTPGSSRSIPFKSKKRLVMDSPSSKSQTGNPNPSSVALPTPEKPLENMLSRSRNRSVAL 60
Query: 57 SLKEIRKAAQTNPQQPPKDQIESAGKQ------ISASPSVKSSVNPAGSGSPKLPAKYMQ 110
S+KEIR+AA + + +D + S+ K S+SPS + S N + KLP KY
Sbjct: 61 SVKEIRQAAGSRRRS--EDPVASSAKSRLFFDSSSSSPSKRKSSNK-NAEKEKLPEKYEN 117
Query: 111 LAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKV 170
L + F++LD + L KL+ S PTF++I +IE LT+RRF HLAQ+K ILPE I+IK+V
Sbjct: 118 LGKFFEALDNSMLLSKLRGSKPTFSNISKQIEHLTERRFCYSHLAQIKHILPEAIEIKRV 177
Query: 171 LTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDFLKDHPEGDEIP 230
L DE T CMKPDLHVT+NADA+E + KSK SK + LR VFRARL DF+K HP+GDE+P
Sbjct: 178 LIHDETTCCMKPDLHVTLNADAVEYNDKSKSESKKIALRKVFRARLADFVKAHPQGDEVP 237
Query: 231 EETLPEPFNRSRSDLQLNM-VKKSTSLTPADSPTDASVEQQQVSSPTCQNSKLLNIVKAP 289
EE LPEPFNR + N+ VK+ +SL + AS + SSP VK
Sbjct: 238 EEPLPEPFNRRKPVENSNVEVKRVSSLMEEMASIPAS---KLFSSPITSTP-----VKTT 289
Query: 290 SISMVTGTSASASDNQQPIVASHFSSRRHFSQKFVNSLAEKKKAERISSGVSIEPSTTPA 349
S S+ TS+ + P + +++ S+ +N L K +S+ PST PA
Sbjct: 290 S-SLAKPTSSQINIAPTPTKPTSTPAKQTLSE--INILPTPVKP--VSTLAKF-PST-PA 342
Query: 350 LEPCLRKISSIE-ETCSTAA-ISAVELSSKSTSKENCLTYCASPTRLSQSCPPVTPVK 405
+ I++ E ST A + + L+++ + N T +P +S PP V+
Sbjct: 343 IIDSTPVITATPPEFASTPARLMSTSLAARPLKRSNGHT---NPDDISAD-PPTKLVR 396
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 134/308 (43%), Positives = 190/308 (61%)
Query: 332 KAERISSGVSIEPSTTPALEPCLRKISS--IEETCSTAAISAVELSSKSTSKENCLTYCA 389
+ +R+SS + E ++ PA + I+S ++ T S A ++ +++ T + T A
Sbjct: 257 EVKRVSSLME-EMASIPASKLFSSPITSTPVKTTSSLAKPTSSQINIAPTPTKPTSTP-A 314
Query: 390 SPTRLSQSCPPVTPVKEIDPMESKVSYPIKVDSEQ---STPAKLVSTPARLMIGTPALHQ 446
T + P TPVK + + S P +DS +TP + STPARLM + A
Sbjct: 315 KQTLSEINILP-TPVKPVSTLAKFPSTPAIIDSTPVITATPPEFASTPARLMSTSLAARP 373
Query: 447 PKRC--YMTPENVSASSPNKLTRRPPHSRTLKSLKFDTPVKNAT----VEHKLNEDISVD 500
KR + P+++SA P KL RR S S D + T ++ ED+S D
Sbjct: 374 LKRSNGHTNPDDISADPPTKLVRRSL-SLNFDSYPEDERTMDFTDDIPIDQVPEEDVSSD 432
Query: 501 GDVLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRS 560
++L ILP+ L +I+E+ERK +E+++PAIS AK RR+MIA LPKLFN+IH+L QSI+R
Sbjct: 433 DEILSILPDKLRHAIKEQERKAIEDQNPAISLAKRRRKMIACLPKLFNVIHYLIQSIRRW 492
Query: 561 VITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPE 620
VITKEEL+HKII+ H ITDR+EVEEQ+ L+ E+VPEW+SEK SS GD+LVCINK+ P
Sbjct: 493 VITKEELVHKIIAGHSDITDRKEVEEQLILLQEIVPEWMSEKKSSSGDVLVCINKLASPL 552
Query: 621 SIRARLEE 628
+IR+RLEE
Sbjct: 553 TIRSRLEE 560
>RGD|1309211 [details] [associations]
symbol:Cdt1 "chromatin licensing and DNA replication factor 1"
species:10116 "Rattus norvegicus" [GO:0000076 "DNA replication
checkpoint" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA;ISO] [GO:0030174 "regulation of DNA-dependent DNA
replication initiation" evidence=IEA;ISO] RGD:1309211 GO:GO:0005634
GO:GO:0003677 EMBL:CH473972 GO:GO:0007090 GO:GO:0000076
GO:GO:0030174 KO:K10727 InterPro:IPR014939 Pfam:PF08839
SMART:SM01075 CTD:81620 OMA:LVLPYKY OrthoDB:EOG4XKV73
GeneTree:ENSGT00390000012337 IPI:IPI00359845 RefSeq:NP_001099662.1
UniGene:Rn.8884 Ensembl:ENSRNOT00000018923 GeneID:292071
KEGG:rno:292071 UCSC:RGD:1309211 NextBio:633695 Uniprot:D3ZKD4
Length = 556
Score = 166 (63.5 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 67/281 (23%), Positives = 123/281 (43%)
Query: 2 SSSDSPQSIHFRCKKPITAKPKPEMSNQNPNPTQLASKTPEKQPSRRARNSR-MALSLKE 60
SSS P + C P+ + K ++ P +++ S+ + R +R + +
Sbjct: 95 SSSVCPSPV---CPSPVK-RTKSTTVSRGPQQSKVPSQDSISELQSCLRQARKLGAQARA 150
Query: 61 IRKAAQTNPQQPPKDQIESAGKQ--ISASPSVKSSVNPAGSGSPKL--PAKYMQLAECFD 116
+R Q N +P + +Q + +P+ + A G P L P KY LAE F
Sbjct: 151 LRARVQENVVEPSTPDTKEPTEQPCVDKAPAYQRFHALAQPGLPGLVLPYKYQVLAEMFR 210
Query: 117 SLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKK---VLTF 173
S+D ++ +L + + TF + ++ + +RF ++ Q+K + PE ++ V TF
Sbjct: 211 SMDTIVSMLHNRSETVTFAKVKQGVQEMIRKRFEERNMGQIKTVYPESYSFRQECNVPTF 270
Query: 174 DEKTSCMKPDLHVTVNAD-AIECDGKSKCNSKNL-NLRTVFRARLMDFLKDHPE---GDE 228
K S + D +T+ E G ++ + L R VFR L++ +K+H +
Sbjct: 271 --KDSIKRSDYQLTIEPLLGQEAGGATQLTATGLLQRRQVFRQNLVERVKEHHKVFLASL 328
Query: 229 IPEETLPEPFNRSRSDLQLNMVKKSTSLTPADSPTDASVEQ 269
P T+PE +R + N V + + PA+ P E+
Sbjct: 329 NPPMTVPED-QLTRWHPRFN-VDEVPDIEPAELPQPPVTEK 367
Score = 103 (41.3 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15
Identities = 24/90 (26%), Positives = 48/90 (53%)
Query: 511 LIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHK 570
L++ IR KE + R + + R Q + LP+L ++ +F S ++ +T E + +
Sbjct: 433 LLERIRAKEVQKQLARMTRCPEKELRLQRLERLPELARVLRGVFVSERKPALTMEVVCAR 492
Query: 571 IISSHLQITDRREVEEQMNLMLELVPEWIS 600
++ S E+E+ + L+ EL+P+W+S
Sbjct: 493 MVDSSRAALSPGEMEKHLLLLAELLPDWLS 522
>UNIPROTKB|Q9H211 [details] [associations]
symbol:CDT1 "DNA replication factor Cdt1" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0030174 "regulation of DNA-dependent DNA
replication initiation" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISS] [GO:0000076
"DNA replication checkpoint" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000083 "regulation of transcription
involved in G1/S phase of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000216 "M/G1 transition of mitotic cell cycle" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
GO:GO:0005829 Reactome:REACT_115566 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0003677 GO:GO:0006260 GO:GO:0000216
GO:GO:0000084 EMBL:AC092384 GO:GO:0000083 GO:GO:0007090
Reactome:REACT_383 GO:GO:0000076 Orphanet:2554 GO:GO:0030174
KO:K10727 InterPro:IPR014939 Pfam:PF08839 SMART:SM01075
eggNOG:NOG312810 EMBL:AF321125 EMBL:AB053172 EMBL:BC000137
EMBL:BC008676 EMBL:BC008860 EMBL:BC009410 EMBL:BC014202
EMBL:BC049205 EMBL:AF070552 IPI:IPI00096899 RefSeq:NP_112190.2
UniGene:Hs.122908 PDB:2LE8 PDB:2WVR PDBsum:2LE8 PDBsum:2WVR
ProteinModelPortal:Q9H211 SMR:Q9H211 DIP:DIP-31089N IntAct:Q9H211
MINT:MINT-1202336 STRING:Q9H211 PhosphoSite:Q9H211 DMDM:308153620
PaxDb:Q9H211 PRIDE:Q9H211 Ensembl:ENST00000301019 GeneID:81620
KEGG:hsa:81620 UCSC:uc002flu.3 CTD:81620 GeneCards:GC16P088870
H-InvDB:HIX0013345 HGNC:HGNC:24576 HPA:HPA017224 MIM:605525
MIM:613804 neXtProt:NX_Q9H211 PharmGKB:PA145008572
HOVERGEN:HBG050872 InParanoid:Q9H211 OMA:LVLPYKY OrthoDB:EOG4XKV73
EvolutionaryTrace:Q9H211 GenomeRNAi:81620 NextBio:71980 Bgee:Q9H211
CleanEx:HS_CDT1 Genevestigator:Q9H211 GermOnline:ENSG00000167513
Uniprot:Q9H211
Length = 546
Score = 148 (57.2 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 72/325 (22%), Positives = 138/325 (42%)
Query: 1 MSSSDSPQSIHF-RCKKP-ITAKPKPEMSNQNPNPTQLASK-TPEKQPSRRARNSRMALS 57
+SS +P++ C P K + Q P+ T + T + S R +
Sbjct: 77 VSSPSTPEAPDIPACPSPGQKIKKSTPAAGQPPHLTSAQDQDTISELASCLQRARELGAR 136
Query: 58 LKEIRKAAQT-----NPQQPPKDQIESAGKQISASPSVKSSVNPAGSGSPKLPAKYMQLA 112
++ ++ +AQ P+ + + E G++ A + P G LP KY LA
Sbjct: 137 VRALKASAQDAGESCTPEAEGRPE-EPCGEKAPAYQRFHALAQPGLPGLV-LPYKYQVLA 194
Query: 113 ECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKK--- 169
E F S+D ++ +L + +PTF + ++ + RRF ++ Q+K + P + ++
Sbjct: 195 EMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEECNVGQIKTVYPASYRFRQERS 254
Query: 170 VLTFDEKTSCMKPDLHVTVNADAI-ECDGKSK--CNSKNLNLRTVFRARLMDFLKDHPEG 226
V TF + T + D +T+ E DG + S+ L R +F +L++ +K+H +
Sbjct: 255 VPTFKDGTR--RSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQKLVEHVKEHHKA 312
Query: 227 ---DEIPEETLPEPFNRSRSDLQLNMVKKSTSLTPADSPTDASVEQQQVSSPTCQNSK-L 282
P +PE +R + N V + + PA P + E+ + ++ L
Sbjct: 313 FLASLSPAMVVPED-QLTRWHPRFN-VDEVPDIEPAALPQPPATEKLTTAQEVLARARNL 370
Query: 283 LNIVKAPSISMVTGTSASASDNQQP 307
++ ++S + SA+ S P
Sbjct: 371 ISPRMEKALSQLALRSAAPSSPGSP 395
Score = 106 (42.4 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 30/119 (25%), Positives = 62/119 (52%)
Query: 509 ENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELI 568
++L++ IR KE + + + + R Q + LP+L ++ +F S ++ ++ E
Sbjct: 420 QDLLERIRAKEAQKQLAQMTRCPEQEQRLQRLERLPELARVLRSVFVSERKPALSMEVAC 479
Query: 569 HKIISSHLQITDRREVEEQMNLMLELVPEWIS-EKLSSCGDLLVCINKMTCPESIRARL 626
+++ S I E+E+ + L+ EL+P+W+S ++ + D V ++K I ARL
Sbjct: 480 ARMVGSCCTIMSPGEMEKHLLLLSELLPDWLSLHRIRT--DTYVKLDKAADLAHITARL 536
Score = 53 (23.7 bits), Expect = 0.00083, Sum P(3) = 0.00083
Identities = 28/132 (21%), Positives = 52/132 (39%)
Query: 14 CKKPITAKPKPEMSNQNPNPTQLASKTPEKQPSRRARN-SRMALSLKEIRKAAQTNPQQP 72
C+ P A+P + ++ ++ P +AR +R L L ++ + P+ P
Sbjct: 27 CRTPSPARPALRAPASATSGSRKRARPPAAPGRDQARPPARRRLRLSVDEVSSPSTPEAP 86
Query: 73 PKDQIESAGKQISASPSVKSSVNPAGSGSPKLPAKYMQLAECFD-SLDAVIRLLKLKCSS 131
S G++I S ++ P S + +LA C + + R+ LK S+
Sbjct: 87 DIPACPSPGQKIKKS--TPAAGQPPHLTSAQDQDTISELASCLQRARELGARVRALKASA 144
Query: 132 PTFTSIC-PKIE 142
C P+ E
Sbjct: 145 QDAGESCTPEAE 156
Score = 47 (21.6 bits), Expect = 0.00083, Sum P(3) = 0.00083
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 302 SDNQQP-IVASHFSSRRH-FSQKFVNSLAEKKKA 333
+D P + AS RR FSQK V + E KA
Sbjct: 279 ADGAAPQLTASRLLQRRQIFSQKLVEHVKEHHKA 312
>UNIPROTKB|F1S6K4 [details] [associations]
symbol:CDT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IEA] [GO:0007090 "regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000076
"DNA replication checkpoint" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA] [GO:0006629
"lipid metabolic process" evidence=IEA] [GO:0004435
"phosphatidylinositol phospholipase C activity" evidence=IEA]
InterPro:IPR001711 PROSITE:PS50008 GO:GO:0005634 GO:GO:0035556
GO:GO:0003677 GO:GO:0004435 GO:GO:0006629 GO:GO:0007090
GO:GO:0000076 GO:GO:0030174 InterPro:IPR014939 Pfam:PF08839
SMART:SM01075 OMA:LVLPYKY GeneTree:ENSGT00390000012337
EMBL:FP102571 Ensembl:ENSSSCT00000002942 Uniprot:F1S6K4
Length = 551
Score = 137 (53.3 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 59/239 (24%), Positives = 105/239 (43%)
Query: 46 SRRARNSRMALSLKEIRKAAQT----NPQQPPKD--QIESAGKQISASPSVKSSVNPAGS 99
SR R + ++E+R++AQ +P+ P ++ E G+++ A + P
Sbjct: 132 SRLQRAQELGAQVQELRESAQRKDAEDPRVPEEEGRPAEPGGEKMPAYQRFHALAQPGPP 191
Query: 100 GSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKF 159
G LP KY LAE F SLD ++ LL + + TF + ++ + +RF +L Q+K
Sbjct: 192 GLV-LPYKYQVLAEMFRSLDTIVGLLHNRSETVTFAKVKQGVQDMMRKRFEEHNLGQIKT 250
Query: 160 ILPEVIQIKK---VLTFDEKTSCMKPDLHVTVNADAIECDGKSKCN---SKNLNLRTVFR 213
+ P + ++ + TF K + D +T+ + G + S L R VF
Sbjct: 251 VYPASYRFRQERFIPTF--KDGVRRSDYQLTLEPLLDQPAGSAAPQLTASCLLQRRQVFS 308
Query: 214 ARLMDFLKDHPEG---DEIPEETLPEPFNRSRSDLQLNMVKKSTSLTPADSPTDASVEQ 269
L+ +++H P +PE R + N V + + PA+ P +VE+
Sbjct: 309 QNLVARVREHHRAFLASLNPPMEVPED-QLMRWHPRFN-VDEVPDIEPAELPQPPTVEK 365
Score = 107 (42.7 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 33/120 (27%), Positives = 64/120 (53%)
Query: 511 LIQSIREKE-RKFMEE--RDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEEL 567
L++ IR KE +K + + R P Q R Q + LP+L ++ +F + ++ +T E
Sbjct: 427 LLERIRAKEAQKQLAQMTRQPEQEQ---RLQRLQRLPELARVLRGVFVAERKPALTMEVA 483
Query: 568 IHKIISSHLQITDRREVEEQMNLMLELVPEWIS-EKLSSCGDLLVCINKMTCPESIRARL 626
+++ S+ E+E+ + L+ EL+P+W+S ++ + D V ++K S+ ARL
Sbjct: 484 CARMVGSYRAAMSLGEMEKHVQLLSELLPDWLSLHRIRA--DTYVKLDKAADLASVTARL 541
Score = 48 (22.0 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 22/103 (21%), Positives = 40/103 (38%)
Query: 342 IEPSTTPALEPCLRKISSIEETCSTA----------AISAVELSSKSTSKENCLTYCASP 391
IEP+ P P + K+++ +E + A A+S + L + S C P
Sbjct: 352 IEPAELPQ-PPTVEKVATAQEVLARARSLMSPRMEKALSDLALRTAEPSSPGC------P 404
Query: 392 TRLSQSCPPVTPVKEIDPMESKVSYPIKVDSEQSTPAKLVSTP 434
+ + PP TP + + + I+ Q A++ P
Sbjct: 405 SLALPATPPATPPAALKGVSQALLERIRAKEAQKQLAQMTRQP 447
Score = 45 (20.9 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 20 AKPKPEMSNQNPNPTQLASKTPEKQPSR-RAR 50
A P+ + S + P+P + A P SR RAR
Sbjct: 20 APPRAKPSLRTPSPAKPAPSAPRPGSSRKRAR 51
>UNIPROTKB|F1MCJ1 [details] [associations]
symbol:CDT1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IEA] [GO:0007090 "regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000076
"DNA replication checkpoint" evidence=IEA] GO:GO:0005634
GO:GO:0003677 GO:GO:0007090 GO:GO:0000076 GO:GO:0030174
InterPro:IPR014939 Pfam:PF08839 SMART:SM01075 OMA:LVLPYKY
GeneTree:ENSGT00390000012337 EMBL:DAAA02046255 IPI:IPI01017766
Ensembl:ENSBTAT00000054406 ArrayExpress:F1MCJ1 Uniprot:F1MCJ1
Length = 572
Score = 142 (55.0 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 73/321 (22%), Positives = 140/321 (43%)
Query: 6 SPQSIHFRCKKPITAKPKPEMSNQ-NPNPTQLASKTPEKQPSRRARNSRMALSLKEIRKA 64
SPQS + K +A +P ++ Q N P+++ T + S R + +E++ +
Sbjct: 113 SPQSKETK-KAARSAGGRPCLAAQENKVPSKV---TLSELKSCLQRAQELGARFQELKAS 168
Query: 65 AQTNPQQP--PKDQ---IESAGKQISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLD 119
AQ + +P P+D+ E G+Q+ A + P G LP KY L+E F S+D
Sbjct: 169 AQKDAGEPSAPEDEGRLEEPCGEQMPAYQRFHALAQPGLPGLV-LPYKYQVLSEMFRSMD 227
Query: 120 AVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKK---VLTFDEK 176
++ +L + + TF + ++ + +RF ++ Q+K + P ++ V TF K
Sbjct: 228 TIVGMLYNRSETVTFAKVKQGVQDMMRKRFEERNVGQIKTVYPGSYHFRQERFVPTF--K 285
Query: 177 TSCMKPDLHVTVNADAIECDGKSKCN---SKNLNLRTVFRARLMDFLKDHPEG---DEIP 230
+ D +T+ + G + S+ L R VF L+ +++H P
Sbjct: 286 DGIKRSDYQLTIEPLLDQQAGSAAPQLTASRLLQRRQVFSQNLVARVREHHRAFLASLNP 345
Query: 231 EETLPEPFNRSRSDLQLNMVKKSTSLTPADSPTDASVEQQQVSSPTCQNSK-LLNIVKAP 289
+PE +R + N V + PA+ P +VE+ + ++ L++
Sbjct: 346 PMEVPED-QLTRWHPRFN-VDGVPDIEPAELPQPPAVEKLTTAQEVLARARSLMSPRMEK 403
Query: 290 SISMVTGTSASASDNQQPIVA 310
++S + +A S + P +A
Sbjct: 404 ALSDLAQRTAEPSSPRSPSLA 424
Score = 102 (41.0 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 23/90 (25%), Positives = 48/90 (53%)
Query: 511 LIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHK 570
L++ IR KE + + + + R Q + LP+L ++ +F S ++ +T E +
Sbjct: 448 LLERIRAKEAQKQLAQMTRRPEQEQRLQRLERLPELARVLRGVFVSERKPALTMEVACAR 507
Query: 571 IISSHLQITDRREVEEQMNLMLELVPEWIS 600
++ S+ E+E+ + L+ EL+P+W+S
Sbjct: 508 MVGSYRAAMSPGEMEKHLQLLSELLPDWLS 537
Score = 74 (31.1 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 25/94 (26%), Positives = 40/94 (42%)
Query: 16 KPITAKPKPEMSNQ---NPNPTQLASKTPEKQPSRRARNSRMALSLKEIRKAAQTNPQQP 72
KP P P S P P +T + P+ R+ R+ + K ++ +A
Sbjct: 25 KPAWRTPSPAKSAPCAAAPGPGSSRKRT--RPPAEPTRDERVPPARKRLKLSADAAGSSL 82
Query: 73 PKDQIESAGKQISASPSVKSSVNPAGSGSPKLPA 106
P+D + AG + A V +PA GSP+ P+
Sbjct: 83 PED-VRDAG--MPAGSDVSGPSSPAARGSPEHPS 113
Score = 44 (20.5 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 339 GV-SIEPSTTPALEPCLRKISSIEETCSTA-AISAVELSSKSTSKENCLTYCASPTR--L 394
GV IEP+ P P + K+++ +E + A ++ + + + +SP L
Sbjct: 365 GVPDIEPAELPQ-PPAVEKLTTAQEVLARARSLMSPRMEKALSDLAQRTAEPSSPRSPSL 423
Query: 395 SQ-SCPPVTP 403
+Q + PP TP
Sbjct: 424 AQPATPPATP 433
>MGI|MGI:1914427 [details] [associations]
symbol:Cdt1 "chromatin licensing and DNA replication factor
1" species:10090 "Mus musculus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO;IDA] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IDA] [GO:0030174 "regulation of DNA-dependent DNA
replication initiation" evidence=ISO;IDA] MGI:MGI:1914427
GO:GO:0005634 GO:GO:0003677 GO:GO:0006260 GO:GO:0007049
GO:GO:0007090 GO:GO:0000076 GO:GO:0030174 KO:K10727
InterPro:IPR014939 Pfam:PF08839 SMART:SM01075 eggNOG:NOG312810
CTD:81620 HOVERGEN:HBG050872 OMA:LVLPYKY OrthoDB:EOG4XKV73
EMBL:AF477481 EMBL:AF477990 EMBL:AB086655 EMBL:AK028287
EMBL:AK049163 EMBL:AK083015 EMBL:BC024485 EMBL:BC048076
IPI:IPI00453682 RefSeq:NP_080290.3 UniGene:Mm.21873 PDB:2KLO
PDB:2RQQ PDB:2ZXX PDB:3A4C PDBsum:2KLO PDBsum:2RQQ PDBsum:2ZXX
PDBsum:3A4C ProteinModelPortal:Q8R4E9 SMR:Q8R4E9 IntAct:Q8R4E9
STRING:Q8R4E9 PhosphoSite:Q8R4E9 PRIDE:Q8R4E9
Ensembl:ENSMUST00000006760 GeneID:67177 KEGG:mmu:67177
UCSC:uc009ntd.1 GeneTree:ENSGT00390000012337 HOGENOM:HOG000111506
InParanoid:Q8R4E9 EvolutionaryTrace:Q8R4E9 NextBio:323800
Bgee:Q8R4E9 CleanEx:MM_CDT1 Genevestigator:Q8R4E9
GermOnline:ENSMUSG00000006585 Uniprot:Q8R4E9
Length = 557
Score = 138 (53.6 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 69/316 (21%), Positives = 130/316 (41%)
Query: 14 CKKPIT-AKPKPEMSNQNPNPTQLASKTPEKQPS-RRARNSRMALSLKEIRKAAQTNPQQ 71
C P+ K Q P E Q RRAR ++ + +R Q N +
Sbjct: 105 CPSPVKRTKSTTVYVGQQPGKIPSEDSVSELQSCLRRAR--KLGAQARALRARVQENAVE 162
Query: 72 P--PKDQIESAGKQISASPSVKSSVNPAGSGSPKL--PAKYMQLAECFDSLDAVIRLLKL 127
P P ++ + + +P+ + A G P L P KY L E F S+D ++ +L
Sbjct: 163 PSTPDAKVPTEQPCVEKAPAYQRFHALAQPGLPGLVLPYKYQVLVEMFRSMDTIVSMLHN 222
Query: 128 KCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKK---VLTFDEKTSCMKPDL 184
+ + TF + ++ + +RF ++ Q+K + P + ++ V TF K S + D
Sbjct: 223 RSETVTFAKVKQGVQEMMRKRFEERNVGQIKTVYPTSYRFRQECNVPTF--KDSIKRSDY 280
Query: 185 HVTVNAD-AIECDGKSKCNSKNL-NLRTVFRARLMDFLKDHPE---GDEIPEETLPEPFN 239
+T+ E G ++ + L R VFR L++ +K+ + P +P+
Sbjct: 281 QLTIEPLLGQEAGGATQLTATCLLQRRQVFRQNLVERVKEQHKVFLASLNPPMAVPDD-Q 339
Query: 240 RSRSDLQLNMVKKSTSLTPADSPTDASVEQQQVSSPTCQNSKLL---NIVKAPS-ISMVT 295
+R + N V + + PA+ P E+ + ++ L + KA S +++ +
Sbjct: 340 LTRWHPRFN-VDEVPDIEPAELPQPPVTEKLTTAQEVLARARSLMTPKMEKALSNLALRS 398
Query: 296 GTSASASDNQQPIVAS 311
S + P+ A+
Sbjct: 399 AEPGSPGTSTPPLPAT 414
Score = 104 (41.7 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 30/117 (25%), Positives = 60/117 (51%)
Query: 511 LIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHK 570
L++ IR KE + R + + R Q + LP+L ++ +F S ++ +T E + +
Sbjct: 434 LLERIRAKEVQKQLARMTRCPEQELRLQRLERLPELARVLRNVFVSERKPALTMEVVCAR 493
Query: 571 IISSHLQITDRREVEEQMNLMLELVPEWIS-EKLSSCGDLLVCINKMTCPESIRARL 626
++ S E+E+ + L+ EL+P+W+S ++ + D V ++K + ARL
Sbjct: 494 MVDSCQTALSPGEMEKHLVLLAELLPDWLSLHRIRT--DTYVKLDKAVDLAGLTARL 548
>ZFIN|ZDB-GENE-070111-1 [details] [associations]
symbol:cdt1 "chromatin licensing and DNA replication
factor 1" species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] ZFIN:ZDB-GENE-070111-1 KO:K10727 InterPro:IPR014939
Pfam:PF08839 SMART:SM01075 CTD:81620 GeneTree:ENSGT00390000012337
EMBL:CR376726 IPI:IPI00496756 RefSeq:XP_695164.3 UniGene:Dr.105738
Ensembl:ENSDART00000098476 GeneID:566787 KEGG:dre:566787
NextBio:20888377 Uniprot:E7F2R5
Length = 678
Score = 134 (52.2 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 52/207 (25%), Positives = 89/207 (42%)
Query: 26 MSNQNPNP----TQLASKTPEKQPSRRARNSRMALSLKEIRKAAQTNPQQPPKDQIESAG 81
+S +P P T+L ++ + R A + E KAA+T P P+++ +
Sbjct: 245 VSTPSPGPVSTLTELKARLDAAREISAKVQQRKAERVIEEAKAAETQPATEPQEREKLPA 304
Query: 82 KQISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKI 141
Q ++ V P + LP +Y LAE F SL+ ++ +L + + TFT + +
Sbjct: 305 YQ--RYHTLAQDVPPGLT----LPYQYKLLAEMFRSLETIVAMLFNRSETVTFTKVKQGV 358
Query: 142 ECLTDRRFSLGHLAQLKFILPEVI---QIKKVLTFDEKTSCMKPDLHVTVNADAIECDGK 198
+ + +RF HL Q+K + P Q K +++F L V D E G
Sbjct: 359 QDMMRKRFEESHLGQIKAVYPSAYTFRQEKNIISFSATAKRSSYQLTVEPVIDE-EFKGV 417
Query: 199 SKCNSKN--LNLRTVFRARLMDFLKDH 223
S + L R +F L++ +K H
Sbjct: 418 RPVLSASRLLERRHIFHQNLVEIVKGH 444
Score = 103 (41.3 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 28/110 (25%), Positives = 58/110 (52%)
Query: 509 ENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELI 568
++L++ IR KE + + Q + R M++ LP+L ++ +F + K+ + E
Sbjct: 552 QSLLERIRAKEAQKLHAVMTRNPQQEERLLMMSRLPELARILRNVFVAEKKPALIMELAC 611
Query: 569 HKIISSHLQITDRREVEEQMNLMLELVPEWIS-EKLSSCGDLLVCINKMT 617
+++I+S+ E+E+ + L+ EL P W++ + DL + +NK T
Sbjct: 612 NRMIASYRSPLTSDEMEKHLRLLAELTPAWLTIHPIRK--DLYLKLNKTT 659
>FB|FBgn0000996 [details] [associations]
symbol:dup "double parked" species:7227 "Drosophila
melanogaster" [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005664
"nuclear origin of replication recognition complex"
evidence=NAS;IDA] [GO:0000076 "DNA replication checkpoint"
evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP;TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0006261 "DNA-dependent DNA replication"
evidence=NAS] [GO:0005657 "replication fork" evidence=IDA]
[GO:0007307 "eggshell chorion gene amplification" evidence=TAS]
[GO:0051298 "centrosome duplication" evidence=IMP] [GO:0051306
"mitotic sister chromatid separation" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0019730 "antimicrobial humoral
response" evidence=IMP] [GO:0042023 "DNA endoreduplication"
evidence=IMP] EMBL:AE013599 GO:GO:0005737 GO:GO:0051298
GO:GO:0000910 GO:GO:0019730 GO:GO:0005657 GO:GO:0042023
GO:GO:0007307 GO:GO:0000076 KO:K10727 InterPro:IPR014939
Pfam:PF08839 SMART:SM01075 eggNOG:NOG312810
GeneTree:ENSGT00390000012337 GO:GO:0051306 GO:GO:0005664
EMBL:AF279146 EMBL:AY118555 RefSeq:NP_524878.1 UniGene:Dm.1771
SMR:Q7JVY2 DIP:DIP-20004N IntAct:Q7JVY2 STRING:Q7JVY2
EnsemblMetazoa:FBtr0087387 GeneID:47121 KEGG:dme:Dmel_CG8171
UCSC:CG8171-RA CTD:13535 FlyBase:FBgn0000996 InParanoid:Q7JVY2
OMA:ARNLFNC OrthoDB:EOG46WWQR ChiTaRS:CDT1 GenomeRNAi:47121
NextBio:838909 Uniprot:Q7JVY2
Length = 743
Score = 117 (46.2 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 36/140 (25%), Positives = 64/140 (45%)
Query: 33 PTQLASKTPEKQPSRRARNSRMALSLKEIRKAAQTNPQQPPKDQIESAGKQISASPSVKS 92
PT++ TP+K R++ ++ K + + N P +E + A S
Sbjct: 257 PTKIPPPTPDKHELMSPRHTDVS---KRLLFSPAKNGS--PVKLVE-----VPAYKRYAS 306
Query: 93 SVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLG 152
V + +G LP KY L + F LD+V+ + + + TF + P ++ + + F+
Sbjct: 307 LVESSRAGQLPLPYKYRHLLDVFKGLDSVVAMFHNRKETITFKKLKPAVQRMLRKNFTET 366
Query: 153 HLAQLKFILPEVIQIKKVLT 172
HLAQ+K I P+ +V T
Sbjct: 367 HLAQIKHIYPDAFIFSQVKT 386
Score = 113 (44.8 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 50/195 (25%), Positives = 87/195 (44%)
Query: 409 PMESKVS-YPIKVDSEQSTPAKLVSTPARLMIGTPALHQPKRCYMTPENVSASSPNKLTR 467
PME + Y K++SE+ A+ G + + T + V S + ++
Sbjct: 527 PMERAMDRYEAKLESEKQQAAESNKKTEEQQAGE--VTRTSTAIQTSQEVPGISGS--SK 582
Query: 468 RPPHSRTLKSLKFDTP-VKNATVEHKLNEDISVDGDVLDILPENLIQSIREKER-KFMEE 525
P T + P VK+ TV D S ++L LP++LI+ IR K+ K +E
Sbjct: 583 NPTVPETTNQTETAKPTVKDCTVP-----DAS--SNLLKGLPKSLIEKIRAKQAAKALEA 635
Query: 526 RDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREVE 585
SQ + + LP+L + +F + ++ V+T E +I KI +S +E+E
Sbjct: 636 MTRRPSQDQ-EATKYSRLPELARHLRNVFVTERKGVLTLEVIIKKIQNSFRANLTPQEIE 694
Query: 586 EQMNLMLELVPEWIS 600
+ L+ + +P W S
Sbjct: 695 AHLKLLAKELPSWAS 709
>UNIPROTKB|I3L5Z3 [details] [associations]
symbol:PRG4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030247 "polysaccharide binding" evidence=IEA]
[GO:0006955 "immune response" evidence=IEA] [GO:0005044 "scavenger
receptor activity" evidence=IEA] InterPro:IPR001212
InterPro:IPR020436 Pfam:PF01033 PRINTS:PR00022 PROSITE:PS00524
PROSITE:PS50958 SMART:SM00201 GO:GO:0006955 GO:GO:0030247
Gene3D:2.110.10.10 InterPro:IPR000585 InterPro:IPR018487
Pfam:PF00045 SMART:SM00120 SUPFAM:SSF50923 GO:GO:0005044
InterPro:IPR018486 PROSITE:PS00024 OMA:EDPKPTP
GeneTree:ENSGT00530000063751 EMBL:FP340191
Ensembl:ENSSSCT00000031330 Uniprot:I3L5Z3
Length = 1383
Score = 100 (40.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 62/278 (22%), Positives = 114/278 (41%)
Query: 258 PADSPTDASVEQQQVSSPTCQNSKLLNIVKAPSISMVTGTSASASDN-QQPIVASHFSSR 316
PA ++AS + PT N K+ S V T + ++ ++P V + +
Sbjct: 831 PAPITSEASTSTTTMEPPTTPK----NSAKSTPESAVEPTPKAVENSPKEPTVPT--TKA 884
Query: 317 RHFSQKFVNSLAEKKKAERISSGVSIEPSTTPALEPCLRKISSIEETCSTAAISAVELSS 376
++ + + A+ K E+ +I TT A + EE S + I+ +++S
Sbjct: 885 PTVTKPEMTTRAKDKDTEK--DMYTIPEMTTAAPKTVTETAIKTEEKASESKITTTQVTS 942
Query: 377 KSTSKENCLTYCASPTRLSQSCPPV--TPVKEIDPMESKVSYPIKVDSEQSTPAKLVSTP 434
T E+ T + + + P V T K + SK + +++T ++ V+TP
Sbjct: 943 TPT--EDTTTSSKTTLKPTTLVPKVMTTTKKTTEKAMSKPEQTTSIPKDRATNSQ-VTTP 999
Query: 435 ARLMIGTPALHQPKRCYMTPENVSASSPNKLTRRPPHSRTLKSLKFD-TPVKNATVEHKL 493
+ T A +P P+ P K T PP S T K T V AT++
Sbjct: 1000 -KPPKPTKAPKKPTST-KKPKAPKGRKP-KTTPTPPKSTTSVLPKTSPTAVAEATLQTTT 1056
Query: 494 NEDISVDGDVLDILPENLIQSIREKERKFMEERDPAIS 531
+++ +++DI P+N E E+ + R P ++
Sbjct: 1057 IPQQTLNSEIIDINPKNEDADTAEGEKPQLIPRPPVLT 1094
Score = 90 (36.7 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 24/93 (25%), Positives = 41/93 (44%)
Query: 15 KKPITAKPK-PEMSNQNPNPTQLASKTPEKQPSRRARNSRMALSLKEIRKAAQTNPQQPP 73
KKP++ PK P + + P PT P +++ S + +++ A T P++P
Sbjct: 359 KKPVSTTPKEPSPTTKGPIPTTTREPAPTTT-KKQSPTSPKEPAPTTVKEPASTTPKEPE 417
Query: 74 KDQIESAGKQISASPSVKSSVNPAGSGSPKLPA 106
+ A P+ + PA + SPK PA
Sbjct: 418 PTTPKEAAPTTPKDPASNTPKEPALTTSPKEPA 450
>UNIPROTKB|F1MSQ6 [details] [associations]
symbol:NEFH "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060052 "neurofilament cytoskeleton organization"
evidence=IEA] [GO:0045110 "intermediate filament bundle assembly"
evidence=IEA] [GO:0005883 "neurofilament" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000786
"nucleosome" evidence=IEA] InterPro:IPR005819 PRINTS:PR00624
GO:GO:0005739 GO:GO:0000226 GO:GO:0003677
GeneTree:ENSGT00690000102043 GO:GO:0005883 GO:GO:0060052
InterPro:IPR016044 InterPro:IPR018039 Pfam:PF00038 PROSITE:PS00226
GO:GO:0006334 GO:GO:0000786 GO:GO:0045110 InterPro:IPR010790
Pfam:PF07142 EMBL:DAAA02045602 IPI:IPI00733059
Ensembl:ENSBTAT00000029508 OMA:EGTANND Uniprot:F1MSQ6
Length = 1082
Score = 115 (45.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 79/327 (24%), Positives = 130/327 (39%)
Query: 224 PEGDEIP-EETLPEPFNRSRSDLQLNMVKKSTSLTP--ADSPTDASVEQQQVSSPTCQNS 280
PE + P +E P +++S ++ K + +P A SP +A ++ SP + +
Sbjct: 611 PEKAKSPVKEEAKSP-EKAKSPVEAKSPVKEEAKSPEKAKSPVEAK-SPEKAKSPVKEEA 668
Query: 281 KLLNIVKAPSISMVTGTSASASDNQQPIVASHFSSRRHFSQKFVNSLAEKKKAERISSGV 340
K K+P V + S + P+ S + S V E K E+ S V
Sbjct: 669 KSPEKAKSP----VKEEAKSPEKAKSPVKEEAKSPEKAKSP--VKE--EAKSPEKAKSPV 720
Query: 341 SIEP-STTPALEPCLRKISSIEETCSTAAISAVELSSKSTSKENCLT--YCASPTRLSQS 397
E S A P + S E+ S + E +KS +KE + SP +
Sbjct: 721 KEEAKSPEKAKSPVKEEAKSPEKAKSPVEAKSPE-KAKSPAKEEAKSPEKAKSPVKEEAK 779
Query: 398 CPPV--TPVKEIDPMESKVSYPIKVDSEQSTPAKLVSTP-ARLMIGTPALHQPKRCYMTP 454
P +PVKE K P K +++ AK P + + + +PK +P
Sbjct: 780 SPEKAKSPVKEEAKSPEKAKSPAKEEAKSPEKAKSPEKPKSPVKEEAKSPEKPK----SP 835
Query: 455 ENVSASSPNKLTRRPPHSRTLKSLKFDTPVKNATVEHKL-NEDISVDGDVLD-ILPENLI 512
A SP K + P K +PVK+ E K +++ + + E
Sbjct: 836 VKEEAKSPEK-PKSPVKEEAKSPEKAKSPVKD---EAKAPGKEVPKKEEAKSPVKEEEKP 891
Query: 513 QSIREKE--RKFMEERDPAISQAKWRR 537
Q +R KE +K EE+ PAI +A+ ++
Sbjct: 892 QEVRAKEPPKKAEEEKAPAIPKAEEKK 918
Score = 63 (27.2 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 24/99 (24%), Positives = 48/99 (48%)
Query: 13 RCKKPITAKPKPEMSNQNPNPTQLASKTPEKQPSR-RARNSRMALSLKEIRKAAQTNPQQ 71
+ K P+ + K + +P ++ K+PEK S A++ A S +++ A++ P++
Sbjct: 507 KAKSPVKEEAKSPQKEEAKSPAEV--KSPEKAKSPVEAKSPEKAKS--PVKEEAKS-PEK 561
Query: 72 PPKDQIESAGKQISASPSVKSSVNPAGSGSP---KLPAK 107
K +E+ + + SP + + +P SP K P K
Sbjct: 562 A-KSPVEAKSPEKAKSPMKEEAKSPEKVKSPVEAKSPEK 599
>FB|FBgn0030266 [details] [associations]
symbol:CG11122 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
GO:GO:0005875 EMBL:AE014298 GO:GO:0008270
GeneTree:ENSGT00700000104238 FlyBase:FBgn0030266 RefSeq:NP_572685.2
UniGene:Dm.10786 ProteinModelPortal:Q9VZ30 IntAct:Q9VZ30
STRING:Q9VZ30 EnsemblMetazoa:FBtr0073481 GeneID:32046
KEGG:dme:Dmel_CG11122 UCSC:CG11122-RA InParanoid:Q9VZ30 OMA:VNEKIMS
PhylomeDB:Q9VZ30 GenomeRNAi:32046 NextBio:776543
ArrayExpress:Q9VZ30 Bgee:Q9VZ30 Uniprot:Q9VZ30
Length = 3539
Score = 126 (49.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 88/421 (20%), Positives = 164/421 (38%)
Query: 33 PTQLAS-KTPEKQPSRRARNSRMALSLKEIRKAAQTNPQQPPKDQIESAGKQISASPSVK 91
PT L++ + + P+ + N+ + S +A T + + ++ SA+ +
Sbjct: 722 PTPLSALEQQQPSPASGSGNASSSSSCSPSSSSASTLLSTATRTSMSNSTCTSSAATTTV 781
Query: 92 SSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIE----CLTDR 147
SS + A S K K C +D +L CS S+ K + C T +
Sbjct: 782 SSTSSAPSSCTKCGRK------CSGLMDLYRHMLD--CSGDYVWSLAKKRKYRYYCGTKK 833
Query: 148 RFSLGH-LAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNL 206
R + L QL E ++++ +E T D V + +A E +G+ +S +
Sbjct: 834 RRAFSKKLKQLSARKKEKLEVE----VEEGTGDGDGDAEVDGDGEA-EAEGEESVSSSS- 887
Query: 207 NLRTVFRARLMDFLKDHPEGDEIPEETLPE---PFNRSRSDLQLNMVKKSTSLTPADSPT 263
L+ R R D + +P + + + P + N K + S+ + +
Sbjct: 888 KLKNSPRQRPSDAESIRKMLENLPAKRICKKIFPVDNKAKRKAKNKAK-AKSMAKSLVKS 946
Query: 264 DASVEQQQVSSPTCQNSKLLNIVKAPSISMVTGTSASASDNQQPIVASHFSSRRHFSQKF 323
+ +QQ+ S+ N LL ++ S S V T +SA+ + A SRR Q+
Sbjct: 947 KSKSKQQRSSTKRIYNQHLLRTTRSRSRSSVVATGSSAA----AVAAQQQRSRRKQKQQQ 1002
Query: 324 VNSLAEKKKAERISSGVSIEPSTTPALEPCLRKISSIE-ETCSTAAISAVELSSKSTSKE 382
+K++ ++ +E +P P + + +T + A V S+S ++E
Sbjct: 1003 QKQQQQKQQQKKQEQKAKLEKVKSPPEPPAAVESDQMPAKTEARAPAPTVTAKSRSPAEE 1062
Query: 383 NCLTYCASPTRLSQSCPPVTPVKEIDPMESKVSYPIKVDSEQSTPAKLV-STPARLMIGT 441
P L ++ P V E +P S + + + +TPA S PA +
Sbjct: 1063 KPSLRLELPQTLPEAAAPNVSVHETEPASPTPSKQL-MPTPPTTPAPATKSPPAAAAVAP 1121
Query: 442 P 442
P
Sbjct: 1122 P 1122
Score = 60 (26.2 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 26/90 (28%), Positives = 39/90 (43%)
Query: 400 PVTPVKEIDPMESKVSYPIKVDSEQSTPAKLVSTPARLMIGTPALHQPKRCYMTPENVSA 459
PV P + P + P+ V + P V+ PA + T +H P R TP +A
Sbjct: 1279 PVVPAP-VPPPPVAAAAPLPVAAIVPLP---VAAPAPPPVATALVHPPTR--RTPTKAAA 1332
Query: 460 SSPNKLTRRPPHSRTLKSLKFDTPVKNATV 489
+PP S L +LK P++ AT+
Sbjct: 1333 KQMGAPPPKPPAS--LAALKQYPPLE-ATL 1359
>SGD|S000001458 [details] [associations]
symbol:FLO11 "GPI-anchored cell surface glycoprotein
(flocculin)" species:4932 "Saccharomyces cerevisiae" [GO:0005576
"extracellular region" evidence=IEA;IDA] [GO:0005935 "cellular bud
neck" evidence=IDA] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0031225 "anchored to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005618 "cell wall" evidence=IEA]
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0007124 "pseudohyphal growth" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0030447 "filamentous growth"
evidence=IDA] [GO:0000128 "flocculation" evidence=IMP] [GO:0042710
"biofilm formation" evidence=IMP] SGD:S000001458 GO:GO:0005886
GO:GO:0005618 GO:GO:0005576 GO:GO:0005935 GO:GO:0031225
EMBL:BK006942 GO:GO:0016337 eggNOG:NOG12793 GO:GO:0001403
EMBL:Z38061 GO:GO:0042710 KO:K01178 GO:GO:0007124 OrthoDB:EOG4BS0WG
InterPro:IPR018789 Pfam:PF10182 GO:GO:0000128 KO:K14819
RefSeq:NP_012284.3 GeneID:854836 KEGG:sce:YIR019C EMBL:M16164
EMBL:M16165 EMBL:X13857 PIR:S48478 RefSeq:NP_012292.3
ProteinModelPortal:P08640 IntAct:P08640 MINT:MINT-2782681
STRING:P08640 PeptideAtlas:P08640 EnsemblFungi:YIR019C
GeneID:854844 KEGG:sce:YIR026C CYGD:YIR019c
GeneTree:ENSGT00700000104174 OMA:ADQFTYV NextBio:977713
Genevestigator:P08640 GermOnline:YIR019C Uniprot:P08640
Length = 1367
Score = 126 (49.4 bits), Expect = 0.00054, P = 0.00054
Identities = 77/321 (23%), Positives = 123/321 (38%)
Query: 177 TSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDFLKDHPEGDEIPEETLPE 236
TSC K + + D C K SK +T E P +P
Sbjct: 278 TSCTK-EKPTPPHHDTTPCTKKKTTTSKTCTKKTTTPVPTPS--SSTTESSSAP---VPT 331
Query: 237 PFNRSRSDLQLNMVKKSTSLTPADSPTDASVEQQQVSSPTCQNSKLLNIVKAPSISMVTG 296
P + + + +T + A PT +S + S+P ++ ++ S + +
Sbjct: 332 PSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSST-----TESSSAPVTSS 386
Query: 297 TSASASDNQQPIVASHFSSRRHFSQKFVNSLAEKKKAERISSGVSIEPSTTPALEPCLRK 356
T+ S+S P+ S+ S +S E A SS + E S+ P
Sbjct: 387 TTESSS---APVPTPSSSTTESSSAPVTSSTTESSSAPVTSS--TTESSSAPVTSSTTES 441
Query: 357 ISSIEETCSTAAISA-VELSSKSTSKENCLTYCASPTRLSQSCPPVTPVKEIDPMESKVS 415
S+ + +T + SA V S ST++ + +S T S S P TP ES S
Sbjct: 442 SSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTE-SSSAPVPTPSSSTT--ESS-S 497
Query: 416 YPIKVDSEQSTPAKLVSTPARLMIGTPALHQPKRCYMTPENVSA---SSPNKLTRRP--- 469
P+ + +S+ A V TP+ + + P T E+ SA SS + + P
Sbjct: 498 APVTSSTTESSSAP-VPTPSSSTTESSSAPAPTPSSSTTESSSAPVTSSTTESSSAPVPT 556
Query: 470 PHSRTLKSLKFDTPVKNATVE 490
P S T +S TPV ++T E
Sbjct: 557 PSSSTTESSS--TPVTSSTTE 575
>POMBASE|SPAPB15E9.01c [details] [associations]
symbol:SPAPB15E9.01c "sequence orphan" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0009986 "cell
surface" evidence=NAS] [GO:0031225 "anchored to membrane"
evidence=IEA] GO:GO:0005886 GO:GO:0009986 EMBL:CU329670
GO:GO:0031225 eggNOG:NOG12793 EMBL:D89219 PIR:T43040
RefSeq:XP_001713096.1 EnsemblFungi:SPAPB15E9.01c.1 GeneID:5802937
KEGG:spo:SPAPB15E9.01c OMA:TNGLDNT NextBio:20892245 Uniprot:Q8TFG9
Length = 1036
Score = 124 (48.7 bits), Expect = 0.00064, P = 0.00064
Identities = 60/250 (24%), Positives = 100/250 (40%)
Query: 241 SRSDLQLNMVKKSTSLTPADSPTDASVEQQQVSSPTCQNSKLLNIVKAPSISMVTGTSAS 300
S S ++ ST+ T + +PT +S +SS NS + + + S++ T +A+
Sbjct: 151 SSSTTSSSLASSSTNSTTSATPT-SSATSSSLSSTAASNSATSSSLASSSLNSTTSATAT 209
Query: 301 ASDNQQPIVASHFSSRRHFSQKFVNSLAEKKKAERISSGVSIEPSTTPALEP-CLRKISS 359
+S ++ +S S ++ + + ISS VS S+TP +S
Sbjct: 210 SSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVS---SSTPLTSSNSTTAATS 266
Query: 360 IEETCSTAAISAVELSSKSTSKENCLTYCASPTRLSQSCPPVTPVKEIDPMESKVSYPIK 419
T S+A + L ST L+ S T S S P+T V + S P+
Sbjct: 267 ASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSAS-STPLS 325
Query: 420 -VDSEQSTPAKLVS-TPARLMIGTPALHQPKRCYMTPENVSASSPNKLTRRPPHSRTLKS 477
V S ST A S TP + T A + + +A+S + +S + S
Sbjct: 326 SVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATS 385
Query: 478 LKFDTPVKNA 487
TP+ +A
Sbjct: 386 AS-STPLTSA 394
>MGI|MGI:2664670 [details] [associations]
symbol:Pkd1l3 "polycystic kidney disease 1 like 3"
species:10090 "Mus musculus" [GO:0001581 "detection of chemical
stimulus involved in sensory perception of sour taste"
evidence=IDA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005261 "cation channel activity" evidence=IDA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006812 "cation transport"
evidence=IDA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0008324 "cation transmembrane transporter
activity" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] [GO:0033040 "sour taste receptor activity"
evidence=IDA] [GO:0071468 "cellular response to acidity"
evidence=IDA] InterPro:IPR000203 InterPro:IPR001024
InterPro:IPR001304 InterPro:IPR003915 Pfam:PF01477 Pfam:PF01825
PRINTS:PR01433 PROSITE:PS50041 PROSITE:PS50095 PROSITE:PS50221
SMART:SM00034 SMART:SM00303 SMART:SM00308 MGI:MGI:2664670
GO:GO:0016021 GO:GO:0006812 GO:GO:0030246 GO:GO:0007218
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 PROSITE:PS00615 GO:GO:0005509 eggNOG:NOG12793
GO:GO:0005216 GO:GO:0071468 Gene3D:2.60.60.20 InterPro:IPR008976
SUPFAM:SSF49723 InterPro:IPR013122 Pfam:PF08016 CTD:342372
HOVERGEN:HBG066396 KO:K04989 OrthoDB:EOG4S1T68 GO:GO:0001581
EMBL:AY164486 EMBL:DQ382344 EMBL:DQ382345 EMBL:DQ382346
EMBL:DQ382347 EMBL:DQ382348 EMBL:DQ382349 EMBL:DQ382350
EMBL:AC125162 IPI:IPI00742441 IPI:IPI00885299 IPI:IPI00885503
IPI:IPI00885704 IPI:IPI00885885 IPI:IPI00885891 IPI:IPI00886173
IPI:IPI00886257 RefSeq:NP_001034789.2 RefSeq:NP_853522.2
UniGene:Mm.436810 STRING:Q2EG98 MEROPS:T06.004 PhosphoSite:Q2EG98
PRIDE:Q2EG98 Ensembl:ENSMUST00000057344 Ensembl:ENSMUST00000109242
GeneID:244646 KEGG:mmu:244646 UCSC:uc009niu.1
GeneTree:ENSGT00700000104402 InParanoid:Q2EG98 OMA:PPQVTSD
ChiTaRS:PKD1L3 NextBio:386343 Bgee:Q2EG98 CleanEx:MM_PKD1L3
Genevestigator:Q2EG98 Uniprot:Q2EG98
Length = 2201
Score = 118 (46.6 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 71/274 (25%), Positives = 106/274 (38%)
Query: 222 DHPEGDEIPEETLPEPFNRSRSDLQLNMVKKSTSLTPADS-PTDASVEQQQVSSPTCQNS 280
D P P+ TL P + S + TS TPA S P + E +SP S
Sbjct: 349 DTPASSSPPQGTLDTPSSSSPP--------QGTSDTPASSSPPQGTSETPASNSPPQGTS 400
Query: 281 KLLNIVKAPSISMVTGTSASASD--NQQPIVAS--HFSSRRHFSQKFVNSLAEKKKAERI 336
+ P ++ T S+S ++ P +S +S S ++ +
Sbjct: 401 ETPGFSSPPQVTTATLVSSSPPQVTSETPASSSPTQVTSETPASSSPTQVTSDTPASNSP 460
Query: 337 SSGVSIEP---STTPALEPCLRKISSIEETCSTAAISAVELSSKSTSKENCLTYCASPTR 393
G S P S T L S + T T A S+ + T + S T
Sbjct: 461 PQGTSDTPGFSSPTQVTTATLVSSSPPQVTSDTPASSSPPQVTSDTPASSSPPQVTSETP 520
Query: 394 LSQSCPPVTPVKEIDPMESKVSYPIKVDSEQSTPAKLVSTPARLMIGTPALHQPKRCYMT 453
S S P VT D S +S P +V S+ TPA S+P ++ TPA P MT
Sbjct: 521 ASSSPPQVTS----DTSAS-ISPP-QVISD--TPAS--SSPPQVTSETPASSSPTN--MT 568
Query: 454 PENVSASSPNKLTRRPPHSRTLKSLKFDTPVKNA 487
+ ++SSP +T P S + ++ DTP ++
Sbjct: 569 SDTPASSSPTNMTSDTPASSSPTNMTSDTPASSS 602
Score = 60 (26.2 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 27/107 (25%), Positives = 46/107 (42%)
Query: 1 MSSSDSPQSIHFRCKKPITAKPKPEMSNQ---NPNPTQLASKTPEKQPSRRARNSRMALS 57
++SS PQ P ++ P P++++ + +P Q S TP + ++ A S
Sbjct: 234 LASSSPPQGTS---DTPASSSP-PQVTSATSASSSPPQGTSDTPASSSPPQVTSATSASS 289
Query: 58 LKEIRKAAQTNPQQPPKDQIESAGKQISASPSVKSSVNPAGSGSPKL 104
+ PP Q+ SA S+SP +S PA S P++
Sbjct: 290 SPPQGTSDTPASSSPP--QVTSA-TSASSSPPQGTSDTPASSSPPQV 333
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.126 0.356 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 630 630 0.00091 120 3 11 23 0.44 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 609 (65 KB)
Total size of DFA: 307 KB (2156 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 77.78u 0.10s 77.88t Elapsed: 00:00:03
Total cpu time: 77.79u 0.10s 77.89t Elapsed: 00:00:03
Start: Fri May 10 16:13:56 2013 End: Fri May 10 16:13:59 2013