BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006819
(630 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225437846|ref|XP_002263743.1| PREDICTED: CDT1-like protein a, chloroplastic-like [Vitis vinifera]
Length = 646
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 318/614 (51%), Positives = 392/614 (63%), Gaps = 77/614 (12%)
Query: 31 PNPTQLASKTPEK--QPSRRARNSRMALSLKEIRKAAQT--------NPQQPPKDQIESA 80
P+ +SKTPEK P RR RN +ALS+KE+++ A T + + P +A
Sbjct: 96 PDHDPWSSKTPEKPALPPRRGRNGSVALSIKEVKQMATTLTKSAPVQSARTAPVGSARTA 155
Query: 81 GKQISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPK 140
ASPS + +VN S KLP KY LA+ FDSLD+ IRLL+LK S TFT+ICPK
Sbjct: 156 SVDPVASPSRQKNVN----RSMKLPEKYEMLAQFFDSLDSSIRLLRLKGSMSTFTNICPK 211
Query: 141 IECLTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSK 200
IECLTDRRFS G+LAQLK+ILPE I IKKVL DE+TSCMKPDL +T++ D IE SK
Sbjct: 212 IECLTDRRFSHGNLAQLKYILPEAIVIKKVLMLDERTSCMKPDLLITLDVDGIE---NSK 268
Query: 201 CNSKNLNLRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQLNMVKKSTSLTPAD 260
S N +LR +FRARL+DF K HPEGDEIPEETLPEPF++S+ DL NM+K S S PA+
Sbjct: 269 LESGNSHLRKIFRARLLDFAKAHPEGDEIPEETLPEPFSQSKQDLHSNMIKDSYSSLPAE 328
Query: 261 SPTDASVEQQQVSSPTCQNSKLLNIVKAPSISMVTGTSASASDNQQPIVASHFSS--RRH 318
+ D +EQ Q VASH S +R
Sbjct: 329 TSCDVLMEQPQA------------------------------------VASHLSRCFQRR 352
Query: 319 FSQKFVNSLAEKKKAERISSGVSIEPSTTPALEPCLRKISSIEETCSTAAISAVELSSKS 378
FSQK E + + + + S++ S P +P L K SS EE +T A S V+ SS
Sbjct: 353 FSQKIS---GEAENSNKKPANFSLQLSDLPVQDPYLNKSSSNEEVVATVAPSPVKSSS-- 407
Query: 379 TSKENCLTYCASPTRLSQSCPPVTPVKEIDPMESKVSYPIKVDSEQSTPAKLVSTPARLM 438
P L S PP TP+K+ D +++ +K Q TPAKL +PARLM
Sbjct: 408 ------------PAHLPLSHPPATPLKKTDSTDNQDFCSMKTPDIQVTPAKLAFSPARLM 455
Query: 439 IGTPALHQPKRCYMTPENVSASSPNKLTRRPPHSRTLKSLKFDTPVKNATVEHKLNE--D 496
TP+L PKRC M+P + S +SPNKL RRP SR SLKFDTPVK A ++ ++NE
Sbjct: 456 TMTPSLQPPKRCLMSPHDDSTNSPNKLVRRPARSR---SLKFDTPVKGAEIKEEVNEKGS 512
Query: 497 ISVDGDVLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQS 556
+SVD D+LDILPENL++SIREKERK +EE+DPAISQAK RR+MI LPKLFNMIHFLFQS
Sbjct: 513 LSVDNDILDILPENLLESIREKERKAIEEQDPAISQAKRRREMIVGLPKLFNMIHFLFQS 572
Query: 557 IKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINKM 616
I RSV+TKEEL+HKI++SH I DRREVEEQ+ L+ ELVPEWISEKL+S GDLL+CI K
Sbjct: 573 INRSVVTKEELMHKILASHCDIVDRREVEEQLKLLQELVPEWISEKLASSGDLLLCIKKT 632
Query: 617 TCPESIRARLEESK 630
+ PESIR RL E+K
Sbjct: 633 SSPESIRQRLMEAK 646
>gi|255583212|ref|XP_002532371.1| conserved hypothetical protein [Ricinus communis]
gi|223527927|gb|EEF30014.1| conserved hypothetical protein [Ricinus communis]
Length = 578
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 336/646 (52%), Positives = 407/646 (63%), Gaps = 84/646 (13%)
Query: 1 MSSSDSPQSIHFRCKKPI-TAKPKPEMSNQNPNPTQLASKTPEKQPSRRARNSRMALSLK 59
MSSS S I ++ KKP+ +A PK + NP TQ K P + PSRR RN +ALSLK
Sbjct: 1 MSSSRS-SPIPYKSKKPLKSATPKSKSKLSNPIATQTPDKQPAELPSRRLRNRGVALSLK 59
Query: 60 EIRKAAQTNP---QQPPKDQIESAGKQISASPSVKSSVNPAGSGSP--KLPAKYMQLAEC 114
E+RK AQ N + ++SA +QIS P +S+ + P K+P Y L+E
Sbjct: 60 EVRKIAQGNADINKGGGVHIVKSARRQISTWPE-ESTGGEKSNKQPEEKIPEGYEILSEF 118
Query: 115 FDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKVLTFD 174
FD LD+ IRL++LK S PT T+I PKIECLTDRRF GHLAQ+K+ILPE I+I +VL FD
Sbjct: 119 FDCLDSTIRLMRLKGSMPTLTNISPKIECLTDRRFDHGHLAQMKYILPEAIEITRVLVFD 178
Query: 175 EKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDFLKDHPEGDEIPEETL 234
E++SCMKPDLHV++N DAIECD K SKNL+LR VFRARL DF K HPEGDEIP+E L
Sbjct: 179 ERSSCMKPDLHVSLNVDAIECDVNLKSESKNLHLRKVFRARLEDFYKAHPEGDEIPKELL 238
Query: 235 PEPFNRSRSDLQLNMVKKSTSLTPADSPTDASVEQQQVSSPTCQNSKLLNIVKAPSISMV 294
PEPFNRS+ DL K STSL+ I++ P+
Sbjct: 239 PEPFNRSKLDLSSGTTKPSTSLS---------------------------IIETPA---- 267
Query: 295 TGTSASASDNQQPIVASHFSSR--RHFSQKFVNSLAEKKKAERISSG---VSIEPSTTPA 349
GT + S Q P+ ASHFS R FSQK N+ + E G V + S
Sbjct: 268 -GTQMAKS--QLPVAASHFSKSFTRRFSQKLTNT-----EVEITCQGYPTVCSQQSVFSV 319
Query: 350 LEPCLRKISSIEETCSTAAISAVELSSKSTSKENCLTYCASPTRLSQSCPPVTPVKEIDP 409
EP L +SS EET S+A T NC A TR TP K+ID
Sbjct: 320 PEPFLDIVSSNEETSSSAP----------TDSNNC---SADVTR--------TPSKKIDS 358
Query: 410 MESKVSYPIKVDSEQSTPAKLVSTPARLMIGTPALHQPKRCYMTPENVSASSPNKLTRRP 469
S P KV S QSTPAKL TPA+LM TPALH PKRCYM+P++ S S NKL RRP
Sbjct: 359 T-SDGGSPTKVASFQSTPAKLALTPAKLMSATPALHPPKRCYMSPDDDSTSLANKLVRRP 417
Query: 470 PHSRTLKSLKFDTPVKNATVEHKL-----NEDISVDGDVLDILPENLIQSIREKERKFME 524
+R SLKF++P+KN VE +L + DGD+L ILPE+L+QSIREKERK E
Sbjct: 418 VRTR---SLKFESPLKN--VEDELIDDSGDASGDDDGDILKILPESLLQSIREKERKAQE 472
Query: 525 ERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREV 584
ERDPAISQAK RRQMIA LPKLFN++HF FQSI RSV+TKEEL+HKII+ H I DRREV
Sbjct: 473 ERDPAISQAKRRRQMIACLPKLFNLMHFFFQSINRSVLTKEELMHKIIAGHSDIVDRREV 532
Query: 585 EEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARLEESK 630
EEQ++L+LELVPEWIS+KL++ GD L CINKM+ PE+IRARLEE+K
Sbjct: 533 EEQLDLLLELVPEWISKKLATSGDSLFCINKMSSPETIRARLEEAK 578
>gi|224085623|ref|XP_002307639.1| predicted protein [Populus trichocarpa]
gi|222857088|gb|EEE94635.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 301/615 (48%), Positives = 385/615 (62%), Gaps = 97/615 (15%)
Query: 31 PNPTQLASKTPEKQ---PSRRARNSRMALSLKEIRKAAQTNPQQPPKDQIESAGKQISAS 87
P+ + +A++TP +Q PSR RN R+ALSLKE+R A Q +Q +SA +QI++
Sbjct: 32 PSNSTIATQTPTQQSQLPSR-LRNRRVALSLKEVRHIAS---QDHGTNQTKSARRQIASW 87
Query: 88 PSV-----------KSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTS 136
P K N + G K+P KY L E FD+LD+ IRLL++K S TF++
Sbjct: 88 PEDSTTDTTTSKLPKPRKNQSRDGHNKIPDKYEMLGEFFDNLDSSIRLLRMKGSMSTFSN 147
Query: 137 ICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECD 196
I PKIE LTDRRF+ HLAQLK+I+PE I+IK+VL FDE+TSCMKPDL VTVNADAI+CD
Sbjct: 148 ISPKIESLTDRRFTHKHLAQLKYIMPEAIEIKRVLKFDEQTSCMKPDLQVTVNADAIQCD 207
Query: 197 -GKSKCNSKNLNLRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQLNMVKKSTS 255
GK K S+ + LR VFR+RL+DF +DHP+GD+IPEE LPEPFNRS
Sbjct: 208 DGKLKTESEKIYLRKVFRSRLVDFYRDHPQGDDIPEEMLPEPFNRS-------------- 253
Query: 256 LTPADSPTDASVEQQQVSSPTCQNSKLLNIVKAPSISMVTGTSASASDNQQPIVASHFSS 315
++ GT A + ++P +AS S
Sbjct: 254 ------------------------------------PLLAGTPAI--EEEKPAMASLLS- 274
Query: 316 RRHFSQKFVNSLAEKKKAERISSGVSIEPSTTPALEPCLRKISSIEETCSTAAISAVELS 375
R F ++F + +K +I + S++ S + ALEPC KISS E T S +A S ++S
Sbjct: 275 -RSFKRRFSS-----QKGTKIEAENSLQRSVSSALEPCPSKISSNERT-SYSAPSPAKVS 327
Query: 376 SKSTSKENCLTYCASPTRLSQSCPPVTPVKEIDPMESKVSYPIKVDSEQSTPAKLVSTPA 435
S T ++CL+ TP K D + P K+ S+QSTPAKL TP
Sbjct: 328 STPTCDQDCLS--------------ATPSKVKDAINDGDDSPTKMASDQSTPAKLALTPV 373
Query: 436 RLMIGTPALHQPKRCYMTPENVSASSPNKLTRRPPHSRTLKSLKFDTPVKNATVEHKLNE 495
L+ TPALHQ KRC + S++SP+KL RRPP +SL F+TPVK+A E +
Sbjct: 374 ALISTTPALHQHKRCTSPYNDGSSNSPDKLVRRPPS----RSLIFETPVKHAMDEQRETG 429
Query: 496 DISVDGDVLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQ 555
D+S D DVL I PE+L+QSIREKE+K EERDPAISQAK RRQMIA LPKLFN IHFLFQ
Sbjct: 430 DVSDDDDVLKIFPESLLQSIREKEQKAKEERDPAISQAKKRRQMIACLPKLFNKIHFLFQ 489
Query: 556 SIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINK 615
SI++SV+TKEELIHKII+SH I DRREV+EQ+NL+LELVPEWISEKL+S GD + INK
Sbjct: 490 SIRQSVLTKEELIHKIIASHSDIADRREVDEQLNLLLELVPEWISEKLASSGDSIFRINK 549
Query: 616 MTCPESIRARLEESK 630
M PE++RARLEE+K
Sbjct: 550 MYSPETVRARLEEAK 564
>gi|356536825|ref|XP_003536934.1| PREDICTED: CDT1-like protein a, chloroplastic-like [Glycine max]
Length = 596
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 282/617 (45%), Positives = 363/617 (58%), Gaps = 63/617 (10%)
Query: 28 NQNPNPTQLASKTPEKQPSRRARNSRMALSLKEIRKAAQTNPQQ----------PPKDQI 77
+Q P+P Q +SKTPEK P +R RN +ALS+ +IRKAA Q P +
Sbjct: 27 SQPPSPVQFSSKTPEK-PPQRIRNRGVALSVADIRKAACKRLQDQKQCTEMTSAPSSSSL 85
Query: 78 -ESAGKQISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTS 136
+S +QIS PS S S KLP KY L E FD LD ++ L +LK +PTFTS
Sbjct: 86 NKSVRRQISLWPSSPSKPKTTDDESNKLPEKYEILDEFFDRLDTLVSLHRLKRWTPTFTS 145
Query: 137 ICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIEC- 195
I +IE LTDRRF+ HLAQLKFILP I +KK L DE+TSCMKPD+H++++ DA+E
Sbjct: 146 ISSRIESLTDRRFTHSHLAQLKFILPNAIVLKKHLVLDERTSCMKPDIHISLDPDAVEAD 205
Query: 196 DGKSKCNSKNLNLRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQLNMVKKS-- 253
D K ++L+ VFRARL DF + HPEGDEIPE TLPEPFNR + D L+M++
Sbjct: 206 DAKLPPQRGRVSLKKVFRARLRDFCESHPEGDEIPEGTLPEPFNRPKKDSVLDMLETRLP 265
Query: 254 TSLTPADSPTDASVEQQQVSSPTCQNSKLLNIVKAPSISMVTGTSASASDNQQPIVASHF 313
T L P +D N++ N+ + +S++ TS + H
Sbjct: 266 TKLPPCMRYSD-----------IVNNAESANLDE--KLSVLVNTSVELPNE-------HL 305
Query: 314 SSRRHFSQKFVNSLAEKKKAERISSGVSIEPSTTPALEPCLRKISSIEETCSTAAISAVE 373
++ H S F +K + ++P P E + + +T S S +
Sbjct: 306 AAPSHMSPSFRADDVQKNPLLDL-----LQPLAFPVSESSRNENTPFVDTESHLKTSPAK 360
Query: 374 LSSKSTSKENCLTYCASPTRLSQSCP-PVTPVKEIDPMESKVSYPIKVDSEQSTPAKLVS 432
L+S+++S E+CLT CA L SC P TP K + E+K +D+ STPAKLVS
Sbjct: 361 LASEASSSESCLTICAP---LESSCAHPATPSKTTEYTENKDGSLKSIDA-MSTPAKLVS 416
Query: 433 TPARLMIGTPALHQPKRCYMTPENVSASSPNKLTRRPPHSRTLKSLKFDTPVKNATVEHK 492
TP RLM TPAL PKR YM+P++ S SS NKL RRPP SR SLKFDTPVKN
Sbjct: 417 TPIRLMSATPALRSPKRHYMSPDDHSISSLNKLARRPPRSR---SLKFDTPVKNK----- 468
Query: 493 LNEDISVDGDVLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHF 552
D+ D L E+ IQSIREKER ME+RDPAI++AK R++ IASLPKLF+MI
Sbjct: 469 --------DDIFDTLQESTIQSIREKERLAMEKRDPAITEAKKRKKNIASLPKLFDMIRG 520
Query: 553 LFQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVC 612
L + +R+ ITK EL+ KIISS I DR EVEEQ+NL+ EL PEWISEK S GDLL+
Sbjct: 521 LLR--QRNCITKAELVSKIISSRCDIADRSEVEEQLNLLQELAPEWISEKQVSSGDLLLF 578
Query: 613 INKMTCPESIRARLEES 629
INKM PE++RA LEE+
Sbjct: 579 INKMLSPETVRASLEEA 595
>gi|449468538|ref|XP_004151978.1| PREDICTED: CDT1-like protein b-like [Cucumis sativus]
Length = 599
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 266/626 (42%), Positives = 371/626 (59%), Gaps = 86/626 (13%)
Query: 32 NPTQLASKTPEKQPSRRARNSRMALSLKEIRKAAQ--------------TNPQQPPKDQI 77
+P L+S+TPEK P R R ++ALS+KE+++AAQ T + + Q+
Sbjct: 33 DPQSLSSRTPEK-PVERNRKRKVALSIKEVKQAAQSVHESNRQLHHDLTTRGSKLVRRQM 91
Query: 78 ESAGKQISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSI 137
+S + +S S K+ V+ + S KLP K+ L + FD LD+ +RLL+ K + F+S+
Sbjct: 92 DSWSNESQSSRS-KTCVD---NKSNKLPEKFELLCKFFDCLDSAMRLLRFKGVASNFSSV 147
Query: 138 CPKIECLTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDG 197
C KIE LTDRRFS HLAQLKFILPE I +KKV+ FDE+TSCMKPDLH++ N +E
Sbjct: 148 CTKIEVLTDRRFSYSHLAQLKFILPEAIMLKKVVVFDERTSCMKPDLHISFNFGVLESK- 206
Query: 198 KSKCNSKNLNLRTVFRARLMDFLKDHPEGDEIPEETLPEPFN-RSRSDLQLNMVKKSTSL 256
+ + LR +FR RL +F+ HPE D+IP+++LP PFN RS LN+ ++ SL
Sbjct: 207 ----EDQYMQLRKLFRTRLSEFVSSHPEIDDIPKDSLPNPFNFRS-----LNLFPETNSL 257
Query: 257 TPADSPTDASVEQQQV-------SSPTCQNSKLLNIVKAPSISMVTGTSASASDNQQPIV 309
+ + + +Q + S+ +N++ I+K+ T T + ++
Sbjct: 258 SSVKTSIEQLAPEQPLPSAEDIPSNHHSENNQGFRIIKS------TMTGHGPNKQKELFG 311
Query: 310 ASHFS-SRRHFSQKFVNSLAEKKKAERISSGVSIEPSTTPALEPCLRKISSIEETCSTAA 368
SHFS R FSQK VN I+ T A ST
Sbjct: 312 LSHFSPVSRLFSQKAVN----------------IDVQTFDA--------------SSTKP 341
Query: 369 ISAVELSSKSTSKENCLTYCASPTRLSQSCP-PVTP--VKEIDPMESKVSYPIKVDSEQS 425
S ++LSS STS +CL ASP S S P P TP + I M + KV+ S
Sbjct: 342 SSPIKLSSNSTSNLHCLENYASPI-CSLSLPNPTTPSNMVGIVTMRKEDGQSAKVNDIDS 400
Query: 426 TPAKLVSTPARLMIGTPALHQPKRCYMTPENVSASSPNKLTRRPPHSRTLKSLKFDTPVK 485
TP K VST +LM TPA+ PKR MTP++ + S NKL RRPP SR SL FDTP K
Sbjct: 401 TPVKFVSTSDQLMASTPAMAPPKRSSMTPDDDFSYSTNKLVRRPPRSR---SLVFDTPTK 457
Query: 486 NATVEHKLNEDISVDGDVLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPK 545
+ ++ D+S+D D+LD+L E+L+QSIREKERK EE+ PAI+QAK R+++IA+LPK
Sbjct: 458 EDKNKDEI--DVSLDNDILDVLSESLVQSIREKERKIKEEQMPAITQAKRRQKLIANLPK 515
Query: 546 LFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSS 605
LFN I FL+ KR+V+ +EEL++KII+ + I DRREVEEQ++L+ ELVP+WIS+KL+S
Sbjct: 516 LFNAIFFLYH--KRTVVKREELLNKIITGSVDILDRREVEEQLDLLFELVPDWISQKLAS 573
Query: 606 -CGDLLVCINKMTCPESIRARLEESK 630
GD+LVCINK++ ES+ RL+E+K
Sbjct: 574 NGGDVLVCINKLSNVESVSVRLKEAK 599
>gi|449496951|ref|XP_004160272.1| PREDICTED: CDT1-like protein b-like [Cucumis sativus]
Length = 597
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 263/626 (42%), Positives = 366/626 (58%), Gaps = 88/626 (14%)
Query: 32 NPTQLASKTPEKQPSRRARNSRMALSLKEIRKAAQ--------------TNPQQPPKDQI 77
+P L+S+TPEK P R R ++ALS+KE+++AAQ T + + Q+
Sbjct: 33 DPQSLSSRTPEK-PVERNRKRKVALSIKEVKQAAQSVHESNRQLHHDLTTRGSKLVRRQM 91
Query: 78 ESAGKQISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSI 137
+S + +S S K+ V+ + KLP K+ L + FD LD+ +RLL+ K + F+S+
Sbjct: 92 DSWSNESQSSRS-KTCVDNKFN---KLPEKFELLCKFFDCLDSAMRLLRFKGVASNFSSV 147
Query: 138 CPKIECLTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDG 197
C KIE LTDRRFS HLAQLKFILPE I +KKV+ FDE+TSCMKPDLH++ N +E
Sbjct: 148 CTKIEVLTDRRFSYSHLAQLKFILPEAIMLKKVVVFDERTSCMKPDLHISFNFGVLESK- 206
Query: 198 KSKCNSKNLNLRTVFRARLMDFLKDHPEGDEIPEETLPEPFN-RSRSDLQLNMVKKSTSL 256
+ + LR +FR RL +F+ HPE D+IP+++LP PFN RS LN+ ++ SL
Sbjct: 207 ----EDQYMQLRKLFRTRLSEFVSSHPEIDDIPKDSLPNPFNFRS-----LNLFPETNSL 257
Query: 257 TPADSPTDASVEQQQV-------SSPTCQNSKLLNIVKAPSISMVTGTSASASDNQQPIV 309
+ + + +Q + S+ +N++ I+K+ T T + ++
Sbjct: 258 SSVKTSIEQLAPEQPLPSAEDIPSNHHSENNQGFRIIKS------TMTGHGPNKQKELFG 311
Query: 310 ASHFS-SRRHFSQKFVNSLAEKKKAERISSGVSIEPSTTPALEPCLRKISSIEETCSTAA 368
SHFS R FSQK VN I+ T A ST
Sbjct: 312 LSHFSPVSRLFSQKAVN----------------IDVQTFDA--------------SSTKP 341
Query: 369 ISAVELSSKSTSKENCLTYCASPTRLSQSCP-PVTP--VKEIDPMESKVSYPIKVDSEQS 425
S ++LSS STS +CL ASP S S P P TP + I M + KV+ S
Sbjct: 342 SSPIKLSSNSTSNLHCLENYASPI-CSSSLPNPTTPSNIVGIVTMRKEDGQSAKVNDIDS 400
Query: 426 TPAKLVSTPARLMIGTPALHQPKRCYMTPENVSASSPNKLTRRPPHSRTLKSLKFDTPVK 485
TP K VST +LM TPA+ PKR MTP++ + S NKL RRPP SR SL FDTP K
Sbjct: 401 TPVKFVSTSDQLMASTPAMAPPKRSSMTPDDDFSYSTNKLVRRPPRSR---SLVFDTPTK 457
Query: 486 NATVEHKLNEDISVDGDVLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPK 545
+ ++ D+S+D D+LD+L E IREKERK EE+ PAI+QAK R+++IA+LPK
Sbjct: 458 EDKNKDEI--DVSLDNDILDVLSER--PCIREKERKIKEEQMPAITQAKRRQKLIANLPK 513
Query: 546 LFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSS 605
LFN I FL+ KR+V+T+EEL++KII+ + I DRREVEEQ++L+ ELVP+WIS+KL+S
Sbjct: 514 LFNAIFFLYH--KRTVVTREELLNKIITGSVDILDRREVEEQLDLLFELVPDWISQKLAS 571
Query: 606 -CGDLLVCINKMTCPESIRARLEESK 630
GD+LVCINK++ ES+ RL+E+K
Sbjct: 572 NGGDVLVCINKLSNVESVSVRLKEAK 597
>gi|357164360|ref|XP_003580028.1| PREDICTED: CDT1-like protein a, chloroplastic-like [Brachypodium
distachyon]
Length = 576
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 215/610 (35%), Positives = 314/610 (51%), Gaps = 118/610 (19%)
Query: 40 TPEK-QPSRRARNSRMALSLKEIRKAA------QTNPQQPPK-DQIESAGKQISASPSVK 91
TPEK + +RRARN +ALS+KE+R+AA + P + + D +ES +++
Sbjct: 58 TPEKVESTRRARNGTVALSVKEVRRAALGLRRAEKGPAEAAQEDPLESVERELGVG---- 113
Query: 92 SSVNPAGSG-SP-------KLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIEC 143
AG+G SP KLP Y L E F+ ++ RLL++K S TF +IC I+
Sbjct: 114 -----AGAGRSPVKRKPEVKLPESYEMLCEFFNCFESSTRLLRMKGSKATFPNICASIQN 168
Query: 144 LTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNS 203
L++RRF+ G+LAQLK+I+PE I I K+L DEKT CMKPDL V + DAIE K +
Sbjct: 169 LSERRFTYGNLAQLKYIMPEAIVINKILLRDEKTCCMKPDLQVNLLVDAIEGCATQKGET 228
Query: 204 KNLNLRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQLNMVKKSTSLTPADSPT 263
+ LR +FR RL+DF + HPEGD+IPE LP PF R++S V + + P +P
Sbjct: 229 QYSALRRIFRQRLVDFFRSHPEGDDIPEHELPHPFTRTKSS-----VAQFSPRVPQVAPA 283
Query: 264 DASVEQQQVSSPTCQNSKLLNIVKAPSISMVTGTSASASDNQQPIVASHFSS--RRHFSQ 321
V +P ++ QQP++ SH S +R FSQ
Sbjct: 284 ----------------------VPSPCLA-----------EQQPVMMSHMSHSFKRRFSQ 310
Query: 322 KFVNSLAEKKKAERISSGVSIEPSTTPALEPCLRKISSIEETCSTAAISAVELSSKSTSK 381
+ ST PA ++ +E T + + +S L S S
Sbjct: 311 R---------------------SSTCPATASGTSPVAKVEPTTTQSPLSRKSLLS---SD 346
Query: 382 ENCLTYCASPTRLSQSCPPVTPVKEIDPMESKVSYPIKVDSEQSTPAKLVSTPARLMIGT 441
+ + A V+E + +K + TPAK STP RLM T
Sbjct: 347 SGGIDHEAQ-------------VQE----KGGNDVALKFGVSEGTPAKFASTPVRLMAAT 389
Query: 442 PALHQPKRCYMTPENVSASSPNKLTRRPPHSRTLKSLKFDTPVKNATVEHKLNEDISV-- 499
P LH PKR V + P + +R ++ F TP KNA+ + N+ S
Sbjct: 390 PGLHTPKRPISA--TVCDTPPLTMAKRSARAKL-----FMTPTKNASSMEEKNQSTSTSA 442
Query: 500 ---DGDVLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQS 556
D ++L LP++L+QS++EKE++ +EE++ + R+++IASLP F++I ++QS
Sbjct: 443 IDDDDELLSFLPKSLLQSVKEKEKRALEEKETGFAGQVQRQKLIASLPSTFDIIFLIYQS 502
Query: 557 IKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINKM 616
+RSV+TK+ELIHKI +S+ +I DR EVEEQ+ L+ E VPEWISEK + GD+L C++
Sbjct: 503 KQRSVMTKQELIHKITASNPKIVDRGEVEEQLRLLQEFVPEWISEKTARTGDVLCCVDTA 562
Query: 617 TCPESIRARL 626
IR RL
Sbjct: 563 LSQAEIRQRL 572
>gi|297744124|emb|CBI37094.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 169/295 (57%), Positives = 207/295 (70%), Gaps = 19/295 (6%)
Query: 338 SGVSIEPSTTPALEPCLRKISSIEETCSTAAISAVELSSKSTSKENCLTYCASPTRLSQS 397
+ S++ S P +P L K SS EE +T A S V+ SS P L S
Sbjct: 341 ANFSLQLSDLPVQDPYLNKSSSNEEVVATVAPSPVKSSS--------------PAHLPLS 386
Query: 398 CPPVTPVKEIDPMESKVSYPIKVDSEQSTPAKLVSTPARLMIGTPALHQPKRCYMTPENV 457
PP TP+K+ D +++ +K Q TPAKL +PARLM TP+L PKRC M+P +
Sbjct: 387 HPPATPLKKTDSTDNQDFCSMKTPDIQVTPAKLAFSPARLMTMTPSLQPPKRCLMSPHDD 446
Query: 458 SASSPNKLTRRPPHSRTLKSLKFDTPVKNATVEHKLNE--DISVDGDVLDILPENLIQSI 515
S +SPNKL RRP SR SLKFDTPVK A ++ ++NE +SVD D+LDILPENL++SI
Sbjct: 447 STNSPNKLVRRPARSR---SLKFDTPVKGAEIKEEVNEKGSLSVDNDILDILPENLLESI 503
Query: 516 REKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSH 575
REKERK +EE+DPAISQAK RR+MI LPKLFNMIHFLFQSI RSV+TKEEL+HKI++SH
Sbjct: 504 REKERKAIEEQDPAISQAKRRREMIVGLPKLFNMIHFLFQSINRSVVTKEELMHKILASH 563
Query: 576 LQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARLEESK 630
I DRREVEEQ+ L+ ELVPEWISEKL+S GDLL+CI K + PESIR RL E+K
Sbjct: 564 CDIVDRREVEEQLKLLQELVPEWISEKLASSGDLLLCIKKTSSPESIRQRLMEAK 618
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 139/262 (53%), Positives = 173/262 (66%), Gaps = 17/262 (6%)
Query: 31 PNPTQLASKTPEK--QPSRRARNSRMALSLKEIRKAAQT--------NPQQPPKDQIESA 80
P+ +SKTPEK P RR RN +ALS+KE+++ A T + + P +A
Sbjct: 103 PDHDPWSSKTPEKPALPPRRGRNGSVALSIKEVKQMATTLTKSAPVQSARTAPVGSARTA 162
Query: 81 GKQISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPK 140
ASPS + +VN S KLP KY LA+ FDSLD+ IRLL+LK S TFT+ICPK
Sbjct: 163 SVDPVASPSRQKNVN----RSMKLPEKYEMLAQFFDSLDSSIRLLRLKGSMSTFTNICPK 218
Query: 141 IECLTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSK 200
IECLTDRRFS G+LAQLK+ILPE I IKKVL DE+TSCMKPDL +T++ D IE SK
Sbjct: 219 IECLTDRRFSHGNLAQLKYILPEAIVIKKVLMLDERTSCMKPDLLITLDVDGIE---NSK 275
Query: 201 CNSKNLNLRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQLNMVKKSTSLTPAD 260
S N +LR +FRARL+DF K HPEGDEIPEETLPEPF++S+ DL NM+K S S PA+
Sbjct: 276 LESGNSHLRKIFRARLLDFAKAHPEGDEIPEETLPEPFSQSKQDLHSNMIKDSYSSLPAE 335
Query: 261 SPTDASVEQQQVSSPTCQNSKL 282
+ D + Q+S Q+ L
Sbjct: 336 TSCDPANFSLQLSDLPVQDPYL 357
>gi|115457182|ref|NP_001052191.1| Os04g0185100 [Oryza sativa Japonica Group]
gi|38344618|emb|CAE02517.2| OSJNBb0003A12.4 [Oryza sativa Japonica Group]
gi|38347086|emb|CAD39469.2| OSJNBa0001M07.6 [Oryza sativa Japonica Group]
gi|113563762|dbj|BAF14105.1| Os04g0185100 [Oryza sativa Japonica Group]
gi|215767412|dbj|BAG99640.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 588
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 193/551 (35%), Positives = 276/551 (50%), Gaps = 104/551 (18%)
Query: 93 SVNPAGSGSP-----KLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDR 147
V PA SP KLP Y L E F+ ++ RLL++K S +F +IC I+ L++R
Sbjct: 121 GVGPAPVRSPVKRTAKLPESYEMLCEFFNCFESSTRLLRMKGSKASFPNICASIQHLSER 180
Query: 148 RFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLN 207
RF+ HLAQLK+I+PEVI I K+L DE T CMKPDL V + DA+E K K +
Sbjct: 181 RFTYSHLAQLKYIMPEVIVINKILLRDETTCCMKPDLQVNLLVDAVEGVAKQKGETGYSA 240
Query: 208 LRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQLNMVKKSTSLTPADSPTDASV 267
LR +FR RL+D+ +DHPEG +IPE LP PF +RS
Sbjct: 241 LRRIFRQRLVDYFRDHPEGHDIPEHELPHPFGPTRS------------------------ 276
Query: 268 EQQQVSSPTCQNSKLLNIVKAPSISMVTGTSASASDNQQPIVASHF--SSRRHFSQKFVN 325
S+P + V A +S T ++QP+ SH S +R FSQ+
Sbjct: 277 -----SAPQAIQEDIPKTVSALPLSSAT--------DRQPVAMSHMPNSFKRMFSQRSAA 323
Query: 326 SLAEKKKAERISSGVSIEPSTTPALEPCLRKISSIEETCSTAAISAVELSSKSTSKENCL 385
+ A S V EPS T P RK + +V L +S +E +
Sbjct: 324 AAAATTSTTSPLSKV--EPSIT---SPLSRK-----SLLGSPVSGSVSLVRESEGQEKSV 373
Query: 386 TYCASPTRLSQSCPPVTPVKEIDPMESKVSYPIKVDSEQSTPAKLVSTPARLMIGTPALH 445
A +S VS + TPAK STP RLM TP L
Sbjct: 374 EGVA--------------------FQSGVS--------EGTPAKFASTPVRLMAETPVLQ 405
Query: 446 QPKR-----CYMTPENVSASSPNKLTRRPPHSRTLKSLKFDTPVKNATVEHKLNEDIS-- 498
PKR Y TP P K+ +R ++ F TP K+A+ + + S
Sbjct: 406 TPKRPVSGTGYDTP-------PLKMAKRSARTKL-----FMTPTKDASSMDEKKQSTSAS 453
Query: 499 -VDGD--VLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQ 555
+DGD +L LP++L+QS+++KE + + E+ + R ++IASLP +F++I ++Q
Sbjct: 454 TLDGDDELLSFLPKSLLQSVKDKENRALVEKQTGFADHIKREKLIASLPSIFDIIFLIYQ 513
Query: 556 SIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINK 615
S +R+V+TK+ELIHKII+S+ +I DR EVE+Q+ L+ E++P+WISEK + GD+L C++
Sbjct: 514 SRQRTVMTKQELIHKIIASNPKIVDRGEVEDQLKLLEEIIPDWISEKTARTGDVLCCVDT 573
Query: 616 MTCPESIRARL 626
IR RL
Sbjct: 574 AMSQAEIRQRL 584
>gi|116317853|emb|CAH65885.1| OSIGBa0148J22.4 [Oryza sativa Indica Group]
gi|116317863|emb|CAH65893.1| OSIGBa0132G14.1 [Oryza sativa Indica Group]
Length = 582
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 192/551 (34%), Positives = 276/551 (50%), Gaps = 104/551 (18%)
Query: 93 SVNPAGSGSP-----KLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDR 147
V PA SP KLP Y L E F+ ++ RLL++K S +F +IC I+ L++R
Sbjct: 115 GVGPAPVRSPVKRRAKLPESYEMLCEFFNCFESSTRLLRMKGSKASFPNICASIQHLSER 174
Query: 148 RFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLN 207
RF+ HLAQLK+I+PEVI I K+L DE T CMKPDL V + DA+E K K +
Sbjct: 175 RFTYSHLAQLKYIMPEVIVINKILLRDETTCCMKPDLQVNLLVDAVEGVAKQKGETGYSA 234
Query: 208 LRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQLNMVKKSTSLTPADSPTDASV 267
LR +FR RL+D+ +DHPEG +IPE LP PF +RS
Sbjct: 235 LRRIFRQRLVDYFRDHPEGHDIPEHELPHPFGPTRS------------------------ 270
Query: 268 EQQQVSSPTCQNSKLLNIVKAPSISMVTGTSASASDNQQPIVASHF--SSRRHFSQKFVN 325
S+P + V A +S T ++QP+ SH S +R FSQ+
Sbjct: 271 -----SAPQAIQEDIPKTVSALPLSSAT--------DRQPVAMSHMPNSLKRMFSQRSAA 317
Query: 326 SLAEKKKAERISSGVSIEPSTTPALEPCLRKISSIEETCSTAAISAVELSSKSTSKENCL 385
+ A S +EPS T P RK + +V L +S +E +
Sbjct: 318 AAAATTSTTSPLS--KVEPSIT---SPLSRK-----SLLGSPVSGSVSLVRESEGQEKSV 367
Query: 386 TYCASPTRLSQSCPPVTPVKEIDPMESKVSYPIKVDSEQSTPAKLVSTPARLMIGTPALH 445
A +S VS + TPAK STP RLM TP L
Sbjct: 368 EGVA--------------------FQSGVS--------EGTPAKFASTPVRLMAETPVLQ 399
Query: 446 QPKR-----CYMTPENVSASSPNKLTRRPPHSRTLKSLKFDTPVKNATVEHKLNEDIS-- 498
PKR Y TP P K+ +R ++ F TP K+A+ + + S
Sbjct: 400 TPKRPVSGTGYDTP-------PLKMAKRSARTKL-----FMTPTKDASSMDEKKQSTSAS 447
Query: 499 -VDGD--VLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQ 555
+DGD +L LP++L+QS+++KE + + E+ + R ++IASLP +F++I ++Q
Sbjct: 448 TLDGDDELLSFLPKSLLQSVKDKENRALVEKQTGFADHIKREKLIASLPSIFDIIFLIYQ 507
Query: 556 SIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINK 615
S +R+V+TK+ELIHKII+S+ +I DR EVE+Q+ L+ E++P+WISEK + GD+L C++
Sbjct: 508 SRQRTVMTKQELIHKIIASNPKIVDRGEVEDQLKLLEEIIPDWISEKTARTGDVLCCVDT 567
Query: 616 MTCPESIRARL 626
IR RL
Sbjct: 568 AMSQAEIRQRL 578
>gi|125547380|gb|EAY93202.1| hypothetical protein OsI_15007 [Oryza sativa Indica Group]
Length = 585
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 214/629 (34%), Positives = 311/629 (49%), Gaps = 110/629 (17%)
Query: 21 KPKPEMSNQNPNPTQLASKTPEKQPS---RRARNSR-MALSLKEIRKAAQTNPQQPPKDQ 76
KP P+++ Q+ + KQPS RRAR+S +A S+K +R+AA ++ +
Sbjct: 40 KPMPKVAAAAAAAEQIWTPEKPKQPSAAERRARSSGGVAFSVKGVRRAALELRRRSERGA 99
Query: 77 IESAGKQISASPSV--KSSVNPAGSGSP-----KLPAKYMQLAECFDSLDAVIRLLKLKC 129
A +V + V PA SP KLP Y L E F+ ++ RLL++K
Sbjct: 100 ASPAAAAEDELEAVERQLGVGPAPVRSPVKRRAKLPESYEMLCEFFNCFESSTRLLRMKG 159
Query: 130 SSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVN 189
S +F +IC I+ L++RRF+ HLAQLK+I+PEVI I K+L DE T CMKPDL V +
Sbjct: 160 SKASFPNICASIQHLSERRFTYSHLAQLKYIMPEVIVINKILLRDETTCCMKPDLQVNLL 219
Query: 190 ADAIECDGKSKCNSKNLNLRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQLNM 249
DA+E K K + LR +FR RL+D+ +DHPEG +IPE LP PF +RS
Sbjct: 220 VDAVEGVAKQKGETGYSALRRIFRQRLVDYFRDHPEGHDIPEHELPHPFGPTRS------ 273
Query: 250 VKKSTSLTPADSPTDASVEQQQVSSPTCQNSKLLNIVKAPSISMVTGTSASASDNQQPIV 309
S+P + V A +S T ++QP+
Sbjct: 274 -----------------------SAPQAIQEDIPKTVSALPLSSAT--------DRQPVA 302
Query: 310 ASHF--SSRRHFSQKFVNSLAEKKKAERISSGVSIEPSTTPALEPCLRKISSIEETCSTA 367
SH S +R FSQ+ + A S V EPS T P RK +
Sbjct: 303 MSHMPNSFKRMFSQRSAAAAAATTSTTSPLSKV--EPSIT---SPLSRK-----SLLGSP 352
Query: 368 AISAVELSSKSTSKENCLTYCASPTRLSQSCPPVTPVKEIDPMESKVSYPIKVDSEQSTP 427
+V L +S +E + A +S VS + TP
Sbjct: 353 VSGSVSLVRESEGQEKSVEGVA--------------------FQSGVS--------EGTP 384
Query: 428 AKLVSTPARLMIGTPALHQPKR-----CYMTPENVSASSPNKLTRRPPHSRTLKSLKFDT 482
AK STP RLM TP L PKR Y TP P K+ +R + F T
Sbjct: 385 AKFASTPVRLMAETPVLQTPKRPVSGTGYDTP-------PLKMAKRSARMKL-----FMT 432
Query: 483 PVKNATVEHKLNEDIS---VDGD--VLDILPENLIQSIREKERKFMEERDPAISQAKWRR 537
P K+A+ + + S +DGD +L LP++L+QS+++KE + + E+ + R
Sbjct: 433 PTKDASSMDEKKQSTSASTLDGDDELLSFLPKSLLQSVKDKENRALVEKQTGFADHIKRE 492
Query: 538 QMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPE 597
++IASLP +F++I ++QS +R+V+TK+ELIHKII+S+ +I DR EVE+Q+ L+ E++P+
Sbjct: 493 KLIASLPSIFDIIFLIYQSRQRTVMTKQELIHKIIASNPKIVDRGEVEDQLKLLEEIIPD 552
Query: 598 WISEKLSSCGDLLVCINKMTCPESIRARL 626
WISEK + GD+L C++ IR RL
Sbjct: 553 WISEKTARTGDVLCCVDTAMSQAEIRQRL 581
>gi|125589550|gb|EAZ29900.1| hypothetical protein OsJ_13954 [Oryza sativa Japonica Group]
Length = 567
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 193/551 (35%), Positives = 276/551 (50%), Gaps = 104/551 (18%)
Query: 93 SVNPAGSGSP-----KLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDR 147
V PA SP KLP Y L E F+ ++ RLL++K S +F +IC I+ L++R
Sbjct: 100 GVGPAPVRSPVKRTAKLPESYEMLCEFFNCFESSTRLLRMKGSKASFPNICASIQHLSER 159
Query: 148 RFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLN 207
RF+ HLAQLK+I+PEVI I K+L DE T CMKPDL V + DA+E K K +
Sbjct: 160 RFTYSHLAQLKYIMPEVIVINKILLRDETTCCMKPDLQVNLLVDAVEGVAKQKGETGYSA 219
Query: 208 LRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQLNMVKKSTSLTPADSPTDASV 267
LR +FR RL+D+ +DHPEG +IPE LP PF +RS
Sbjct: 220 LRRIFRQRLVDYFRDHPEGHDIPEHELPHPFGPTRS------------------------ 255
Query: 268 EQQQVSSPTCQNSKLLNIVKAPSISMVTGTSASASDNQQPIVASHF--SSRRHFSQKFVN 325
S+P + V A +S T ++QP+ SH S +R FSQ+
Sbjct: 256 -----SAPQAIQEDIPKTVSALPLSSAT--------DRQPVAMSHMPNSFKRMFSQRSAA 302
Query: 326 SLAEKKKAERISSGVSIEPSTTPALEPCLRKISSIEETCSTAAISAVELSSKSTSKENCL 385
+ A S V EPS T P RK + +V L +S +E +
Sbjct: 303 AAAATTSTTSPLSKV--EPSIT---SPLSRK-----SLLGSPVSGSVSLVRESEGQEKSV 352
Query: 386 TYCASPTRLSQSCPPVTPVKEIDPMESKVSYPIKVDSEQSTPAKLVSTPARLMIGTPALH 445
A +S VS + TPAK STP RLM TP L
Sbjct: 353 EGVA--------------------FQSGVS--------EGTPAKFASTPVRLMAETPVLQ 384
Query: 446 QPKR-----CYMTPENVSASSPNKLTRRPPHSRTLKSLKFDTPVKNATVEHKLNEDIS-- 498
PKR Y TP P K+ +R ++ F TP K+A+ + + S
Sbjct: 385 TPKRPVSGTGYDTP-------PLKMAKRSARTKL-----FMTPTKDASSMDEKKQSTSAS 432
Query: 499 -VDGD--VLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQ 555
+DGD +L LP++L+QS+++KE + + E+ + R ++IASLP +F++I ++Q
Sbjct: 433 TLDGDDELLSFLPKSLLQSVKDKENRALVEKQTGFADHIKREKLIASLPSIFDIIFLIYQ 492
Query: 556 SIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINK 615
S +R+V+TK+ELIHKII+S+ +I DR EVE+Q+ L+ E++P+WISEK + GD+L C++
Sbjct: 493 SRQRTVMTKQELIHKIIASNPKIVDRGEVEDQLKLLEEIIPDWISEKTARTGDVLCCVDT 552
Query: 616 MTCPESIRARL 626
IR RL
Sbjct: 553 AMSQAEIRQRL 563
>gi|242094688|ref|XP_002437834.1| hypothetical protein SORBIDRAFT_10g003390 [Sorghum bicolor]
gi|241916057|gb|EER89201.1| hypothetical protein SORBIDRAFT_10g003390 [Sorghum bicolor]
Length = 575
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 291/600 (48%), Gaps = 100/600 (16%)
Query: 40 TPEKQPSR-RARNSRMALSLKEIRKAAQTNPQQPPKDQIESAGKQISASPSVKSSVNPAG 98
TPEK RAR +A S+K IR+AA + P E+A + S + V
Sbjct: 58 TPEKPVEMPRARGRSVAFSVKGIRQAALG--LRRPAAHAEAAAEDELESVERELGVGAGA 115
Query: 99 SGSP-------KLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSL 151
S SP KLP Y L E F+ L++ RLL++K S TF +IC I+ LT+RRF+
Sbjct: 116 SRSPVKRKAEVKLPESYEMLCEFFNCLESSTRLLRMKGSKATFPNICSSIQHLTERRFTH 175
Query: 152 GHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTV 211
HLAQLK+I+PE I I K+L D+ T CM PDL V + A+E K K + L LR +
Sbjct: 176 SHLAQLKYIMPEAIVINKILLRDDTTCCMYPDLQVNLLVSAVENVVKQKGETAYLALRRI 235
Query: 212 FRARLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQLNMVKKSTSLTPADSPTDASVEQQQ 271
FR RL++F ++HPEGD+IPE LP PFNR+ S + + + + P+D + +Q
Sbjct: 236 FRQRLVEFYREHPEGDDIPEHELPHPFNRTGSSMTQDEQRTVPQSSSPVKPSDVTGQQTA 295
Query: 272 VSSPTCQNSKLLNIVKAPSISMVTGTSASASDNQQPIVASHFSSRRHFSQKFVNSLAEKK 331
V S Q+ K ++P IS T ++ S V S S FS+ S+
Sbjct: 296 VMSHMSQSFKRRFSQRSP-ISSTTASAPSPLGKVASTVPSPLSRNSLFSRDVSGSM---- 350
Query: 332 KAERISSGVSIEPSTTPALEPCLRKISSIEETCSTAAISAVELSSKSTSKENC-LTYCAS 390
C SA E+ KS EN + ++
Sbjct: 351 --------------------------------CGDDKPSAKEVFCKSGVLENTPAKFAST 378
Query: 391 PTRLSQSCPPV-TPVKEIDPMESKVSY---PIKVDSEQSTPAKLVSTPARLMIGTPALHQ 446
P RL P + TP + I S Y P+K+ +++S AKL +TP
Sbjct: 379 PVRLMAPTPDLKTPKRPI----SATGYDTPPLKI-AKRSARAKLFTTPT----------- 422
Query: 447 PKRCYMTPENVSASSPNKLTRRPPHSRTLKSLKFDTPVKNATVEHKLNEDISVDGDVLDI 506
K M EN SAS + A D ++L
Sbjct: 423 -KDSSMDGENQSAS-----------------------ISGA--------DADAGDELLSF 450
Query: 507 LPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEE 566
LP++L++S++EKE + +EE++ + R+++IASLP F++I ++QS +RSV+TK+E
Sbjct: 451 LPKSLLESVKEKEERALEEKETGFADQVKRQKLIASLPSTFDIIFLIYQSRQRSVMTKQE 510
Query: 567 LIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARL 626
LIHKII+S +I DR EVEE + L+ ELVP+WISEK + GD L CI+ IR RL
Sbjct: 511 LIHKIIASSPKIADRSEVEEHLTLLKELVPDWISEKTARSGDALCCIDATLSQSEIRQRL 570
>gi|413953211|gb|AFW85860.1| hypothetical protein ZEAMMB73_066419 [Zea mays]
Length = 573
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 200/609 (32%), Positives = 294/609 (48%), Gaps = 122/609 (20%)
Query: 41 PEKQPSRRARNSRMALSLKEIRKAA------QTNPQQPPKDQIESAGKQISASPSVKSSV 94
PE+ P RAR +A S+KEIR+AA + +D +ES +++
Sbjct: 56 PEEMP--RARGRSVAFSVKEIRRAALGLRRPAAQAEAAVEDDLESVERELGVG------- 106
Query: 95 NPAGSG-SP-------KLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTD 146
AG+G SP KLP Y L E F+ L++ RLL++K S TF +IC I+ LT+
Sbjct: 107 --AGAGRSPVKRKAEVKLPESYEMLFEFFNCLESSTRLLRMKGSKATFPNICSSIQNLTE 164
Query: 147 RRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNL 206
RRF+ HLAQLK+I+PE I I K+L D+ T CM PDL V + A+E K K + L
Sbjct: 165 RRFTHSHLAQLKYIMPEAIVINKILLRDDTTCCMYPDLQVNLLVGAVENVLKQKGETAYL 224
Query: 207 NLRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQLNMVKKSTSLTPADSPTDAS 266
LR FR RL++F ++HPEGD+IPE LP PFNR+RS L + + + + P+D +
Sbjct: 225 ALRRTFRQRLVEFYREHPEGDDIPEHELPHPFNRARSSLPQDEQRTAPESSSPLKPSDVN 284
Query: 267 VEQQQVSSPTCQNSKLLNIVKAPSISMVTGTSASASDNQQPIVASHFSS--RRHFSQKFV 324
+QQ + V SH S +R FSQ+
Sbjct: 285 GQQQTAA-----------------------------------VMSHMSQSFKRRFSQRSP 309
Query: 325 NSLAEKKKAERISSGVSIEPS--TTPALEPCLRKISSIEETCSTAAISAVELSSKSTSKE 382
A + S PS + +L C+ S+ + S+ SA E KS E
Sbjct: 310 IGSATASAPSPLVKAASTAPSPLSRNSLFGCVDSGSTCGDEKSS---SAKEDFCKSGVSE 366
Query: 383 NC-LTYCASPTRLSQSCPPV-TPVKEIDPMESKVSY---PIKVDSEQSTPAKLVSTPARL 437
N + ++P RL P + TP + I S Y P++ +++S AKL +TP
Sbjct: 367 NTPAKFASTPARLMAPTPGLKTPKRPI----SATGYDTPPLRT-AKRSARAKLFTTPT-- 419
Query: 438 MIGTPALHQPKRCYMTPENVSASSPNKLTRRPPHSRTLKSLKFDTPVKNATVEHKLNEDI 497
K E+ SAS V A+ + L
Sbjct: 420 ----------KNNSTGGESQSAS-----------------------VSGASADDDL---- 442
Query: 498 SVDGDVLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSI 557
L LP++L+QS++EKE + + E++ + R+++IASLP F+++ ++QS
Sbjct: 443 ------LSFLPQSLLQSVKEKEDRALVEKESGFADQVRRQKLIASLPSTFDVVFLIYQSR 496
Query: 558 KRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINKMT 617
+RSV+TK+EL+HKII+S +I DR EVE + L+ ELVP+W SEK + GD L C++
Sbjct: 497 QRSVMTKQELVHKIIASSPKIADRSEVEGHLTLLKELVPDWFSEKTARSGDALCCVDATL 556
Query: 618 CPESIRARL 626
IR RL
Sbjct: 557 SQSEIRQRL 565
>gi|224062155|ref|XP_002300782.1| predicted protein [Populus trichocarpa]
gi|222842508|gb|EEE80055.1| predicted protein [Populus trichocarpa]
Length = 376
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 146/213 (68%), Positives = 172/213 (80%), Gaps = 6/213 (2%)
Query: 417 PIKVDSEQSTPAKLVSTPARLMIGTPALHQPKRCYMTPENVSASSPNKLTRRPPHSRTLK 476
PIK+ S QSTPAKL STPA L+ TPALH KRC + ++ S SSP+KL RRPP +
Sbjct: 169 PIKMASVQSTPAKLASTPATLISTTPALHPHKRCMSSCDDDSFSSPDKLVRRPPS----R 224
Query: 477 SLKFDTPVKNATVEHKLNEDISVDGDVLDILPENLIQSIREKERKFMEERDPAISQAKWR 536
SL F+TPVK+A E K ED+S D ++L ILPE+L+QSIREKE+K EERDPAISQAK R
Sbjct: 225 SLIFETPVKHAKDEQK--EDVSDDDNILKILPESLLQSIREKEQKAKEERDPAISQAKRR 282
Query: 537 RQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVP 596
RQMIA LPKLFN IHFLFQSIK+SV+TKEELIHKII+SH I DRREVEEQ+NL+LELVP
Sbjct: 283 RQMIACLPKLFNKIHFLFQSIKQSVLTKEELIHKIIASHSDIADRREVEEQLNLLLELVP 342
Query: 597 EWISEKLSSCGDLLVCINKMTCPESIRARLEES 629
EWISEKL+S GDLL INK+ PE++RA+LEE+
Sbjct: 343 EWISEKLASSGDLLFRINKLYSPETVRAQLEEA 375
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/252 (46%), Positives = 150/252 (59%), Gaps = 59/252 (23%)
Query: 111 LAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKV 170
L E FD+LD+ IRLL++K S TF++I PKIE LTDRRF+ HLAQLK+I+PE I+IK+V
Sbjct: 2 LGELFDNLDSSIRLLRMKGSMSTFSNISPKIESLTDRRFTHKHLAQLKYIMPEAIEIKRV 61
Query: 171 LTFDEKTSCMKPDLHVTVNADAIEC-DGKSKCNSKNLNLRTVFRARLMDFLKDHPEGDEI 229
L F+E+TSCMKP+LHVTVNADAIEC DGK K SKN+ LR VFR+RL DF +DHP+GD+I
Sbjct: 62 LRFNEQTSCMKPELHVTVNADAIECDDGKLKSESKNIYLRKVFRSRLADFYRDHPQGDDI 121
Query: 230 PEETLPEPFNRSRSDLQLNMVKKSTSLTPADSPTDASVEQQQVSSPTCQNSKLLNIVKAP 289
PEE LPEPFNR L+++K++T
Sbjct: 122 PEEMLPEPFNR------LSLLKETT----------------------------------- 140
Query: 290 SISMVTGTSASASDNQQPIVASHF--SSRRHFSQKFVNSLAEKKKAERISSGVSIEP--- 344
A + +QPIVAS S +R FSQK +S + + + ++ P
Sbjct: 141 -----------AVEEEQPIVASLLPQSFQRRFSQKVFDSPIKMASVQSTPAKLASTPATL 189
Query: 345 -STTPALEPCLR 355
STTPAL P R
Sbjct: 190 ISTTPALHPHKR 201
>gi|22530894|gb|AAM96888.1| hypothetical protein [Arabidopsis thaliana]
Length = 571
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/241 (49%), Positives = 157/241 (65%), Gaps = 20/241 (8%)
Query: 402 TPVKEIDPMESKVSYPIKVDSE---QSTPAKLVSTPARLMIGTPALHQPKRC--YMTPEN 456
TPVK + + S P +DS +TP + STPARLM + A KR + P++
Sbjct: 326 TPVKPVSTLAKFPSTPAIIDSTPVITATPPEFASTPARLMSTSLAARPLKRSNGHTNPDD 385
Query: 457 VSASSPNKLTRR---------PPHSRTLKSLKFDTPVKNATVEHKLNEDISVDGDVLDIL 507
+SA P KL RR P RT+ D P+ ED+S D ++L IL
Sbjct: 386 ISADPPTKLVRRSLSLNFDSYPEDERTM-DFTDDIPIDQVP-----EEDVSSDDEILSIL 439
Query: 508 PENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEEL 567
P+ L +I+E+ERK +E+++PAIS AK RR+MIA LPKLFN+IH+L QSI+R VITKEEL
Sbjct: 440 PDKLRHAIKEQERKAIEDQNPAISLAKRRRKMIACLPKLFNVIHYLIQSIRRWVITKEEL 499
Query: 568 IHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARLE 627
+HKII+ H ITDR+EVEEQ+ L+ E+VPEW+SEK SS GD+LVCINK+ P +IR+RLE
Sbjct: 500 VHKIIAGHSDITDRKEVEEQLILLQEIVPEWMSEKKSSSGDVLVCINKLASPLTIRSRLE 559
Query: 628 E 628
E
Sbjct: 560 E 560
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/266 (47%), Positives = 168/266 (63%), Gaps = 12/266 (4%)
Query: 1 MSSSDSPQSIHFRCKKPITAK-PKPEMSNQNPNPTQLASKTPEKQPSR---RARNSRMAL 56
MS+ S +SI F+ KK + P + NPNP+ +A TPEK R+RN +AL
Sbjct: 1 MSTPGSSRSIPFKSKKRLVMDSPSSKSQTGNPNPSSVALPTPEKPLENMLSRSRNRSVAL 60
Query: 57 SLKEIRKAAQTNPQQPPKDQIESAGK-----QISASPSVKSSVNPAGSGSPKLPAKYMQL 111
S+KEIR+AA + ++ +D + S+ K S+S K + + KLP KY L
Sbjct: 61 SVKEIRQAAGS--RRRSEDPVASSAKSRLFFDSSSSSPSKRKSSNKNAEKEKLPEKYENL 118
Query: 112 AECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKVL 171
+ F++LD + L KL S PTF++I +I LT+RRF HLAQ+K ILPE I+IK+VL
Sbjct: 119 GKFFEALDNSMLLSKLXGSKPTFSNISKQIXHLTERRFCYSHLAQIKHILPEAIEIKRVL 178
Query: 172 TFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDFLKDHPEGDEIPE 231
DE T CMKPDLHVT+NADA+E + KSK SK + LR VFRARL DF+K HP+GDE+PE
Sbjct: 179 IHDETTCCMKPDLHVTLNADAVEYNDKSKSESKKIALRKVFRARLADFVKAHPQGDEVPE 238
Query: 232 ETLPEPFNRSRSDLQLNM-VKKSTSL 256
E LPEPFNR + N+ VK+ +SL
Sbjct: 239 EPLPEPFNRRKPVENSNVEVKRVSSL 264
>gi|15224645|ref|NP_180685.1| CDT1A-like protein [Arabidopsis thaliana]
gi|75206335|sp|Q9SJW9.1|CDT1A_ARATH RecName: Full=CDT1-like protein a, chloroplastic; Short=AtCDT1a;
Flags: Precursor
gi|4432822|gb|AAD20672.1| hypothetical protein [Arabidopsis thaliana]
gi|330253422|gb|AEC08516.1| CDT1A-like protein [Arabidopsis thaliana]
Length = 571
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/241 (49%), Positives = 157/241 (65%), Gaps = 20/241 (8%)
Query: 402 TPVKEIDPMESKVSYPIKVDSE---QSTPAKLVSTPARLMIGTPALHQPKRC--YMTPEN 456
TPVK + + S P +DS +TP + STPARLM + A KR + P++
Sbjct: 326 TPVKPVSTLAKFPSTPAIIDSTPVITATPPEFASTPARLMSTSLAARPLKRSNGHTNPDD 385
Query: 457 VSASSPNKLTRR---------PPHSRTLKSLKFDTPVKNATVEHKLNEDISVDGDVLDIL 507
+SA P KL RR P RT+ D P+ ED+S D ++L IL
Sbjct: 386 ISADPPTKLVRRSLSLNFDSYPEDERTM-DFTDDIPIDQVP-----EEDVSSDDEILSIL 439
Query: 508 PENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEEL 567
P+ L +I+E+ERK +E+++PAIS AK RR+MIA LPKLFN+IH+L QSI+R VITKEEL
Sbjct: 440 PDKLRHAIKEQERKAIEDQNPAISLAKRRRKMIACLPKLFNVIHYLIQSIRRWVITKEEL 499
Query: 568 IHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARLE 627
+HKII+ H ITDR+EVEEQ+ L+ E+VPEW+SEK SS GD+LVCINK+ P +IR+RLE
Sbjct: 500 VHKIIAGHSDITDRKEVEEQLILLQEIVPEWMSEKKSSSGDVLVCINKLASPLTIRSRLE 559
Query: 628 E 628
E
Sbjct: 560 E 560
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/266 (47%), Positives = 170/266 (63%), Gaps = 12/266 (4%)
Query: 1 MSSSDSPQSIHFRCKKPITAK-PKPEMSNQNPNPTQLASKTPEKQPSR---RARNSRMAL 56
MS+ S +SI F+ KK + P + NPNP+ +A TPEK R+RN +AL
Sbjct: 1 MSTPGSSRSIPFKSKKRLVMDSPSSKSQTGNPNPSSVALPTPEKPLENMLSRSRNRSVAL 60
Query: 57 SLKEIRKAAQTNPQQPPKDQIESAGK-----QISASPSVKSSVNPAGSGSPKLPAKYMQL 111
S+KEIR+AA + ++ +D + S+ K S+S K + + KLP KY L
Sbjct: 61 SVKEIRQAAGS--RRRSEDPVASSAKSRLFFDSSSSSPSKRKSSNKNAEKEKLPEKYENL 118
Query: 112 AECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKVL 171
+ F++LD + L KL+ S PTF++I +IE LT+RRF HLAQ+K ILPE I+IK+VL
Sbjct: 119 GKFFEALDNSMLLSKLRGSKPTFSNISKQIEHLTERRFCYSHLAQIKHILPEAIEIKRVL 178
Query: 172 TFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDFLKDHPEGDEIPE 231
DE T CMKPDLHVT+NADA+E + KSK SK + LR VFRARL DF+K HP+GDE+PE
Sbjct: 179 IHDETTCCMKPDLHVTLNADAVEYNDKSKSESKKIALRKVFRARLADFVKAHPQGDEVPE 238
Query: 232 ETLPEPFNRSRSDLQLNM-VKKSTSL 256
E LPEPFNR + N+ VK+ +SL
Sbjct: 239 EPLPEPFNRRKPVENSNVEVKRVSSL 264
>gi|38567811|emb|CAD13172.2| CDT1a protein [Arabidopsis thaliana]
Length = 571
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/241 (49%), Positives = 157/241 (65%), Gaps = 20/241 (8%)
Query: 402 TPVKEIDPMESKVSYPIKVDSE---QSTPAKLVSTPARLMIGTPALHQPKRC--YMTPEN 456
TPVK + + S P +DS +TP + STPARLM + A KR + P++
Sbjct: 326 TPVKPVSTLAKFPSTPAIIDSTPVITATPPEFASTPARLMSTSLAARPLKRSNGHTNPDD 385
Query: 457 VSASSPNKLTRR---------PPHSRTLKSLKFDTPVKNATVEHKLNEDISVDGDVLDIL 507
+SA P KL RR P RT+ D P+ ED+S D ++L IL
Sbjct: 386 ISADPPTKLVRRSLSLNFDSYPEDERTM-DFTDDIPIDQVP-----EEDVSSDDEILSIL 439
Query: 508 PENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEEL 567
P+ L +I+E+ERK +E+++PAIS AK RR+MIA LPKLFN+IH+L QSI+R VITKEEL
Sbjct: 440 PDKLRHAIKEQERKAIEDQNPAISLAKRRRKMIACLPKLFNVIHYLIQSIRRWVITKEEL 499
Query: 568 IHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARLE 627
+HKII+ H ITDR+EVEEQ+ L+ E+VPEW+SEK SS GD+LVCINK+ P +IR+RLE
Sbjct: 500 VHKIIAGHSDITDRKEVEEQLILLQEIVPEWMSEKKSSSGDVLVCINKLASPLTIRSRLE 559
Query: 628 E 628
E
Sbjct: 560 E 560
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/266 (47%), Positives = 170/266 (63%), Gaps = 12/266 (4%)
Query: 1 MSSSDSPQSIHFRCKKPITAK-PKPEMSNQNPNPTQLASKTPEKQPSR---RARNSRMAL 56
MS+ S +SI F+ KK + P + NPNP+ +A TPEK R+RN +AL
Sbjct: 1 MSTPGSSRSIPFKSKKRLVMDSPSSKSQTGNPNPSSVALPTPEKPLENMLSRSRNRSVAL 60
Query: 57 SLKEIRKAAQTNPQQPPKDQIESAGK-----QISASPSVKSSVNPAGSGSPKLPAKYMQL 111
S+KEIR+AA + ++ +D + S+ K S+S K + + KLP +Y L
Sbjct: 61 SVKEIRQAAGS--RRRSEDPVASSAKSRLFFDSSSSSPSKRKSSNKNAEKEKLPERYENL 118
Query: 112 AECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKVL 171
+ F++LD + L KL+ S PTF++I +IE LT+RRF HLAQ+K ILPE I+IK+VL
Sbjct: 119 GKFFEALDNSMLLSKLRGSKPTFSNISKQIEHLTERRFCYSHLAQIKHILPEAIEIKRVL 178
Query: 172 TFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDFLKDHPEGDEIPE 231
DE T CMKPDLHVT+NADA+E + KSK SK + LR VFRARL DF+K HP+GDE+PE
Sbjct: 179 IHDETTCCMKPDLHVTLNADAVEYNDKSKSESKKIALRKVFRARLADFVKAHPQGDEVPE 238
Query: 232 ETLPEPFNRSRSDLQLNM-VKKSTSL 256
E LPEPFNR + N+ VK+ +SL
Sbjct: 239 EPLPEPFNRRKPVENSNVEVKRVSSL 264
>gi|297822863|ref|XP_002879314.1| hypothetical protein ARALYDRAFT_482053 [Arabidopsis lyrata subsp.
lyrata]
gi|297325153|gb|EFH55573.1| hypothetical protein ARALYDRAFT_482053 [Arabidopsis lyrata subsp.
lyrata]
Length = 575
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 119/242 (49%), Positives = 158/242 (65%), Gaps = 21/242 (8%)
Query: 402 TPVKEIDPMESKVSYPIKVDS----EQSTPAKLVSTPARLMIGTPALHQPKRC--YMTPE 455
TPVK + + S P +DS STP + STPARL+ + A KR + P+
Sbjct: 329 TPVKLVSTLAKIPSTPAIIDSTPVIAASTPPEFASTPARLLSTSLAARPLKRSSGHSNPD 388
Query: 456 NVSASSPNKLTRRPPHSRTLKSLKFDTP---------VKNATVEHKLNEDISVDGDVLDI 506
++SA P KL RR SL FD+ + ++ E++S D ++L I
Sbjct: 389 DISADPPTKLVRRS------LSLNFDSYPEDEKAVDFTDDEPIDQVPEEELSSDDEILSI 442
Query: 507 LPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEE 566
LP+ L +I+E+ERK +E+R+PAIS AK RR+MIA LPKLFN+IH+L QSI+R VITKEE
Sbjct: 443 LPDKLRHAIKEQERKAIEDRNPAISLAKRRRKMIACLPKLFNVIHYLIQSIRRWVITKEE 502
Query: 567 LIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARL 626
L+HKII+ H ITDR+EVEEQ+ L+ ELVPEW+SEK SS GD+LVCINK+ P +IR+RL
Sbjct: 503 LVHKIIAGHSDITDRKEVEEQLILLQELVPEWMSEKKSSSGDVLVCINKLASPITIRSRL 562
Query: 627 EE 628
EE
Sbjct: 563 EE 564
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/256 (46%), Positives = 160/256 (62%), Gaps = 14/256 (5%)
Query: 1 MSSSDSPQSIHFRCKKPITAK-PKPEMSNQNPNPTQLASKTPEKQPSR---RARNSRMAL 56
MS+ S +SI F+ KK + P + N NP+ +A TPEK R+RN +AL
Sbjct: 1 MSAPGSSRSIPFKSKKRLVMDSPSSKSQTGNSNPSSVALPTPEKPLENMLSRSRNRSVAL 60
Query: 57 SLKEIRKAAQTNPQQPPKDQIESAGKQ--------ISASPSVKSSVNPAGSGSPKLPAKY 108
S+KEIR+AA + + +D + S+ K S+S K + + KLP KY
Sbjct: 61 SVKEIRQAAGSRRRS--EDPVASSAKSKLFFSHNDSSSSSPSKRVSSNKNAEKEKLPEKY 118
Query: 109 MQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIK 168
L + F++LD I L KL+ S PTF++I +IE LT+RRF HLAQ+K IL E I+IK
Sbjct: 119 ENLGKFFEALDNSISLSKLRGSKPTFSNISKQIEHLTERRFCYSHLAQIKHILREAIEIK 178
Query: 169 KVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDFLKDHPEGDE 228
+VL DE+T CMKPDLH+T+NADA+E KSK SK + LR VFRARL +F+K HP+GDE
Sbjct: 179 RVLIHDERTCCMKPDLHITLNADAVEYKDKSKSESKKIALRKVFRARLAEFVKAHPQGDE 238
Query: 229 IPEETLPEPFNRSRSD 244
+PEE LPEPFNR + D
Sbjct: 239 VPEEPLPEPFNRRKPD 254
>gi|356545849|ref|XP_003541346.1| PREDICTED: CDT1-like protein a, chloroplastic-like [Glycine max]
Length = 427
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 148/408 (36%), Positives = 208/408 (50%), Gaps = 59/408 (14%)
Query: 28 NQNPNPTQLASKTPEKQPSRRARNSRMALSLKEIRKAAQTNPQQPPKDQIE--------- 78
+Q P+ + +SKTPEK P +R RN +ALS+ +IRKAA Q DQ +
Sbjct: 27 SQPPSHVEFSSKTPEK-PPQRIRNRGVALSVADIRKAACKRLQ----DQKQCTETTSSSL 81
Query: 79 --------SAGKQISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCS 130
S +QIS PS S S LP KY L E F+ LD ++ L +LK
Sbjct: 82 SSSSSLSKSVRRQISLGPSSPSKPMATEDESSNLPEKYEILDEFFNRLDTLVSLHRLKRW 141
Query: 131 SPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNA 190
+PTFTSI +IE LTDRRF+ HLAQLKFIL + I ++K L DE+TSCMKPD+H++++
Sbjct: 142 TPTFTSISSRIESLTDRRFTHSHLAQLKFILRKAIVLRKHLVLDERTSCMKPDIHISLDP 201
Query: 191 DAIECDG-KSKCNSKNLNLRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQLNM 249
DA+E D K ++L+ VFRARL +F + HPEGDEIPE TLPEPFNR + D ++M
Sbjct: 202 DAVEADAAKLPPQGGRVSLKKVFRARLKEFWESHPEGDEIPEGTLPEPFNRQKKDSVVDM 261
Query: 250 VKKSTSLTPADSPTDASVEQQQVSSPTCQNSKLLNIVKAPSISMVTGTSASASDNQQPIV 309
+ ++P + S N+ L + P + V
Sbjct: 262 L---------ETPLPTKLPPCMRYSDIVNNADLDEKLYVPVNATVE------------FP 300
Query: 310 ASHFSSRRHFSQKFVNSLAEKKKAERISSGV---SIEPSTTPALEPCLRKISSIEETCST 366
H ++ H + F +A+ + S++P P E ++ + +T S
Sbjct: 301 NEHLAAPSHMAPSF--------RADDVQQNPLLDSLQPLAFPVSESSQKENPPLVDTESH 352
Query: 367 AAISAVELSSKSTSKENCLTYCASPTRLSQSCP-PVTPVKEIDPMESK 413
S + SS+++S E+CLT CAS L S P P TP K I+ E K
Sbjct: 353 LKTSPAKFSSEASSSESCLTICAS---LESSSPHPATPSKTIEYTEKK 397
>gi|297822865|ref|XP_002879315.1| hypothetical protein ARALYDRAFT_902157 [Arabidopsis lyrata subsp.
lyrata]
gi|297325154|gb|EFH55574.1| hypothetical protein ARALYDRAFT_902157 [Arabidopsis lyrata subsp.
lyrata]
Length = 456
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 112/224 (50%), Positives = 147/224 (65%), Gaps = 11/224 (4%)
Query: 415 SYPIKVDSE----QSTPAKLVSTPARLMIGTPALHQPKRCYMT--PENVSASSPNKLTRR 468
S P K+DS STP + STP RL + KR + P++VSA P KL RR
Sbjct: 223 STPAKIDSTPVVVASTPPEFASTPVRLFSTSQEARSQKRSSGSTNPDDVSADPPVKLVRR 282
Query: 469 PPHSRTLKSLKFDTPVKNATVEH---KLNEDISV-DGDVLDILPENLIQSIREKERKFME 524
S D + TV+ ++ ED+S D ++L +LP+ L QSI+++E K E
Sbjct: 283 S-LLLNFDSCSEDKKAMDVTVDQTIVQVPEDVSSNDEEILSMLPDKLRQSIKDQEMKTNE 341
Query: 525 ERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREV 584
+++PAIS AK RR+MIA LPKLF++IH++ QSI+R VITKEEL+HKII+ H ITDR+EV
Sbjct: 342 DQNPAISLAKRRREMIACLPKLFDVIHYIIQSIRRWVITKEELVHKIIAGHSDITDRKEV 401
Query: 585 EEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARLEE 628
EEQ+ LM ELVPEW+SEK SS DLLV INK+ P +IR+RLEE
Sbjct: 402 EEQLILMQELVPEWMSEKRSSSEDLLVFINKLASPLTIRSRLEE 445
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/139 (58%), Positives = 100/139 (71%)
Query: 101 SPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFI 160
+P+ P + L + FD+LD+ I L KL+ S PTF++I IE LT R F HLAQLK I
Sbjct: 38 TPEKPPESPTLGKFFDALDSSILLSKLRGSKPTFSNISKIIEHLTQRSFCYSHLAQLKHI 97
Query: 161 LPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDFL 220
LPE I+IK+VL DE T CMKPDLHV++NADA+ D KS SK +NLR VFRARL +F+
Sbjct: 98 LPEAIEIKRVLIHDETTCCMKPDLHVSLNADAVVYDDKSISESKRINLRKVFRARLAEFV 157
Query: 221 KDHPEGDEIPEETLPEPFN 239
K HP+GDE+PEE LPE FN
Sbjct: 158 KTHPQGDEVPEEPLPELFN 176
>gi|242034107|ref|XP_002464448.1| hypothetical protein SORBIDRAFT_01g018570 [Sorghum bicolor]
gi|241918302|gb|EER91446.1| hypothetical protein SORBIDRAFT_01g018570 [Sorghum bicolor]
Length = 561
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 165/546 (30%), Positives = 262/546 (47%), Gaps = 107/546 (19%)
Query: 99 SGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLK 158
S S +L K+ L F+ +++ IRLL L+ TF++I ++E LT R+ S HLAQ+K
Sbjct: 107 SRSIELFEKHKDLLNLFNRMESSIRLLHLRKRMATFSNIAAQVEILTKRKLSYSHLAQMK 166
Query: 159 FILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMD 218
+ PE IQIK++L DEK+ CM D+ + + D +EC S S ++ + F ++L+
Sbjct: 167 HLFPEAIQIKRILLHDEKSLCMYADMEIILVMDVVEC--TSPDQSPSMAICEAFYSKLLR 224
Query: 219 FLKDHPEGDEIPEETLPEPFNRSRSDLQLNMVKKSTSLTPADSPTDASVEQQQVSSPTCQ 278
FL H +G +IPE TLPEPFN SRS QL + +AS + P Q
Sbjct: 225 FLDTHHKGTDIPEATLPEPFN-SRSKGQLFL--------------EAS-HNGHAAEPHLQ 268
Query: 279 NSKLLNIVKAPSISMVTGTSASASDNQQPIVASHF--SSRRHFSQKFVNSLAEKKKAERI 336
GT+ N ASHF S R+ SQK + AEK +
Sbjct: 269 -----------------GTTEDGFSN-----ASHFPQSFRKLMSQKVITDGAEKTQ---- 302
Query: 337 SSGVSIEPSTTPALEPCLRKISSIE----ETCSTAAISAVELSSKSTSKENCLTYCASPT 392
L P K+SS+ E + + I + +S + + E A+P+
Sbjct: 303 -------------LLPDPTKLSSVSAYDMEGTNRSPIKQDKHASFTVNSE----ISATPS 345
Query: 393 RLSQSCPPVTPVKEIDPMESKVSYPIKVDSEQSTPAKLVSTPARLMIGTPALHQPKRCYM 452
R SC ++ TP K ++ + L++ TPA+ PKR
Sbjct: 346 RHLISC-----------------------CQEGTP-KQETSESPLLVQTPAMQTPKRPLP 381
Query: 453 TP-ENVSASSPNKLTRRPPHS--RTLK-SLKFD--TPVKNATVEHKL---NEDISVDGDV 503
TP E + A+ + R S R+L SLKF+ +P + +EH+ E S D
Sbjct: 382 TPLEKLEATCGHISEPRSASSARRSLNTSLKFEGGSPSYHDRMEHEAASKKEIFSEDSSS 441
Query: 504 LDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVIT 563
+ +S+ EK+ F E ++ ++ +ASL F+++ + S K S+IT
Sbjct: 442 FN-------KSLEEKDPVFFTEDKINLADQVGTQEKMASLRSTFDIVCGISHSTKNSLIT 494
Query: 564 KEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIR 623
K+EL H I++++L+I EVEEQ++++ +L P+WIS+K+ + G++L I +T S+R
Sbjct: 495 KQELFHNILANNLEIEQMGEVEEQLHILEDLAPDWISKKVINGGEILYSIEPITDQNSVR 554
Query: 624 ARLEES 629
RL E+
Sbjct: 555 ERLVEA 560
>gi|356548049|ref|XP_003542416.1| PREDICTED: CDT1-like protein a, chloroplastic-like [Glycine max]
Length = 161
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 120/178 (67%), Gaps = 18/178 (10%)
Query: 452 MTPENVSASSPNKLTRRPPHSRTLKSLKFDTPVKNATVEHKLNEDISVDGDVLDILPENL 511
M+P++ S SS NKL R P SR SLKFDTPVKN D+ D L E
Sbjct: 1 MSPDDHSISSLNKLARHPSRSR---SLKFDTPVKNK-------------DDISDTLQEEF 44
Query: 512 IQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKI 571
IQSIREKER MEERDPAI+QAK R++ IAS+PKLF+MI L + +R+ ITK EL+ KI
Sbjct: 45 IQSIREKERLAMEERDPAITQAKKRKKNIASIPKLFDMIRGLLR--QRNCITKAELVSKI 102
Query: 572 ISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARLEES 629
IS+ I DR EVEEQ+NL+ EL PEWI EK GDLL+ INKM PE++RA LEE+
Sbjct: 103 ISTRCDIADRSEVEEQLNLLQELAPEWIYEKHVYSGDLLLFINKMLSPETVRASLEEA 160
>gi|226496413|ref|NP_001142182.1| uncharacterized protein LOC100274350 [Zea mays]
gi|194707504|gb|ACF87836.1| unknown [Zea mays]
gi|414870959|tpg|DAA49516.1| TPA: CDT1a protein isoform 1 [Zea mays]
gi|414870960|tpg|DAA49517.1| TPA: CDT1a protein isoform 2 [Zea mays]
Length = 562
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 159/549 (28%), Positives = 247/549 (44%), Gaps = 112/549 (20%)
Query: 99 SGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLK 158
S S +L K+ L F+ +++ IRLL+L+ TF +I ++E L R+ S HLAQ+K
Sbjct: 107 SRSIELLEKHKDLLNLFNRMESSIRLLRLRKRMATFNNIATQVEILAKRKLSYCHLAQMK 166
Query: 159 FILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMD 218
++ PE IQIK+VL DEK+ CM D+ + + D +E S +S ++ + F ++L+
Sbjct: 167 YLFPEAIQIKRVLLHDEKSLCMYADMEIILVMDVVEY--TSTDHSPSMTICDAFYSKLLT 224
Query: 219 FLKDHPEGDEIPEETLPEPFN-RSRSDLQLNMVKKSTSLTPADSPTDASVEQQQVSSPTC 277
FL H +G +IPE LPEPFN RSR L L + P
Sbjct: 225 FLDAHHKGTDIPEAILPEPFNLRSRGQLNLEASHNGHAAEP------------------- 265
Query: 278 QNSKLLNIVKAPSISMVTGTSASASDNQQPIVASHF--SSRRHFSQKFVNSLAEKKKAER 335
+ GT+ N ASHF S R+ SQK + AE+
Sbjct: 266 ---------------HLQGTTKDGFSN-----ASHFPQSFRKLMSQKVITDGAER----- 300
Query: 336 ISSGVSIEPSTTPALEPCLRKISSIEETCSTAAISAVELSSKSTSKENCLTY----CASP 391
T L+P K+SS+ S S K K +T A+P
Sbjct: 301 ----------TQLLLDPT--KLSSV----SAYDTEGTNRSPKKQDKHASVTVNSEISATP 344
Query: 392 TR-LSQSCPPVTPVKEIDPMESKVSYPIKVDSEQSTPAKLVSTPARLMIGTPALHQPKRC 450
+R L C TP +E + +P L+ TPA PKR
Sbjct: 345 SRHLISRCQEGTPKQET-----------------------LESP--LLAQTPATQTPKRQ 379
Query: 451 YMTP-ENVSASSPNKLTRRPPHS--RTLK-SLKFD--TPVKNATVEHKLNEDISVDGDVL 504
TP E + A+ + R S R+L SLKF+ +P + +EH V +
Sbjct: 380 LPTPLEKLEATCGHISEPRSASSARRSLNTSLKFEGGSPSYHDRMEH-------VATSKI 432
Query: 505 DILPEN---LIQSIREKERKFMEERDPA-ISQAKWRRQMIASLPKLFNMIHFLFQSIKRS 560
IL E+ +S+ E F +RD ++ ++ +ASL F ++ + SIK S
Sbjct: 433 GILSEDSSSFNKSLEENGPVFFTDRDKINLADPVGVQEKMASLRSTFGIVCDISHSIKNS 492
Query: 561 VITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPE 620
+ITK+EL H I++++L+I E+EEQ++++ +L P WIS+K+ + ++L +
Sbjct: 493 LITKQELFHNILANNLEIEQMGEIEEQLHILEDLAPNWISKKVINGEEILYSFETIADQN 552
Query: 621 SIRARLEES 629
S+ RL E+
Sbjct: 553 SVWERLVEA 561
>gi|195604728|gb|ACG24194.1| CDT1a protein [Zea mays]
Length = 561
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 158/551 (28%), Positives = 244/551 (44%), Gaps = 117/551 (21%)
Query: 99 SGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLK 158
S S +L K+ L F+ +++ IRLL+L+ TF +I ++E L R+ S HLAQ+K
Sbjct: 107 SRSIELLEKHKDLLNLFNRMESSIRLLRLRKRMATFNNIATQVEILAKRKLSYCHLAQMK 166
Query: 159 FILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMD 218
++ PE IQIK+VL DEK+ CM D+ + + D +E S +S ++ + F ++L+
Sbjct: 167 YLFPEAIQIKRVLLHDEKSLCMYADMEIILVMDVVEY--TSPDHSPSMAICDAFYSKLLT 224
Query: 219 FLKDHPEGDEIPEETLPEPFN-RSRSDLQLNMVKKSTSLTPADSPTDASVEQQQVSSPTC 277
FL H +G +IPE LPEPFN RSR L L + P
Sbjct: 225 FLDAHHKGTDIPEAILPEPFNLRSRGQLNLEASNNGHAAEP------------------- 265
Query: 278 QNSKLLNIVKAPSISMVTGTSASASDNQQPIVASHF--SSRRHFSQKFVNSLAEKKKAER 335
+ GT+ N ASHF S R+ SQK + AE+
Sbjct: 266 ---------------HLQGTTKDGFSN-----ASHFPQSFRKLMSQKVITDGAER----- 300
Query: 336 ISSGVSIEPSTTPALEPCLRKISSIEETCSTAAISAVELSSKSTSKENCLTY----CASP 391
T L+P K+SS+ S S K K +T A+P
Sbjct: 301 ----------TQLLLDPT--KLSSV----SAYDTEGTNRSPKKQDKHASVTVNSEISATP 344
Query: 392 TR-LSQSCPPVTPVKEIDPMESKVSYPIKVDSEQSTPAKLVSTPARLMIGTPALHQPKRC 450
+R L C TP +E ++ + L+ TPA PKR
Sbjct: 345 SRHLISRCQEGTPKQE-------------------------TSESPLLAQTPATQTPKRQ 379
Query: 451 YMTP-ENVSASSPNKLTRRPPHS--RTLK-SLKFD--TPVKNATVEHKLNEDISVDGDVL 504
TP E + A+ + R S R+L SLKF+ +P + +EH I + +
Sbjct: 380 LPTPLEKLEATCGHISEPRSASSARRSLNTSLKFEGGSPSYHDRMEHVATSKIGIFSED- 438
Query: 505 DILPENLIQSIREKERKFMEER------DPAISQAKWRRQMIASLPKLFNMIHFLFQSIK 558
+ +S+ E F +R DP Q K +ASL F ++ + SIK
Sbjct: 439 ---SSSFNKSLEENGPVFFTDREKINLADPVGVQEK-----MASLRSTFGIVCDISHSIK 490
Query: 559 RSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINKMTC 618
S+ITK+EL H I++++L+I E+EEQ++++ +L P+WIS K+ + G++ +
Sbjct: 491 NSLITKQELFHNILANNLEIEQMGEIEEQLHILEDLAPDWIS-KVINGGEIFYSFETIAD 549
Query: 619 PESIRARLEES 629
S+ RL E+
Sbjct: 550 QNSVWERLVEA 560
>gi|15232570|ref|NP_191031.1| chromatin licensing and DNA replication factor 1 [Arabidopsis
thaliana]
gi|75182149|sp|Q9M1S9.1|CDT1B_ARATH RecName: Full=CDT1-like protein b; Short=AtCDT1b
gi|7258375|emb|CAB77591.1| putative protein [Arabidopsis thaliana]
gi|38567370|emb|CAD13173.1| CDT1b protein [Arabidopsis thaliana]
gi|115646793|gb|ABJ17120.1| At3g54710 [Arabidopsis thaliana]
gi|332645748|gb|AEE79269.1| chromatin licensing and DNA replication factor 1 [Arabidopsis
thaliana]
Length = 486
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 113/169 (66%), Gaps = 11/169 (6%)
Query: 77 IESAGKQI-SASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFT 135
I++ +QI S+SP +S + KLP ++ L E F+ LD IRLLKLK SS T+
Sbjct: 26 IKTVKRQIFSSSPKPESVI--------KLPERFEILEEFFNGLDTAIRLLKLKGSSTTYA 77
Query: 136 SICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIEC 195
+ICPKIE LT+R FS HLAQ+K I PE I++K+VL F E T CMKP LH+ +N DAI
Sbjct: 78 NICPKIEYLTNRIFSYDHLAQMKHIYPEAIELKRVLKFVEDTCCMKPRLHIKLNTDAIVV 137
Query: 196 DGKSKCNSKNLNLRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRSRSD 244
+ + C +K + LR VF ++L+DF K HP+ DEIP+E LPEPFN + D
Sbjct: 138 E-DTICGTKYMELRKVFHSKLVDFRKAHPK-DEIPKELLPEPFNSPQRD 184
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/265 (40%), Positives = 143/265 (53%), Gaps = 34/265 (12%)
Query: 396 QSCPPVTPVKEIDPMESK-VSYPIKVDSEQSTPAKLVSTPARLMIGTPALHQPKRCY-MT 453
Q V P + +ES+ V P+K + STP+K +STP RLM TP L KRC +T
Sbjct: 216 QDVNKVIPDSTLSHIESRIVETPVK---DLSTPSKDLSTPIRLMSATPTLQLSKRCIELT 272
Query: 454 PE---NVSASSPNKLTRRPPHSRTLKSLKFDTPVKNATVEHKLNEDISVDGDVL------ 504
PE + S S N L R P S + + D K+ ++ I+ + D L
Sbjct: 273 PEGGDDNSLRSTNSLARGPSRSLNFDTFEEDAIEKDDIGNESDDKGINYEEDGLLQSVKG 332
Query: 505 -------DILPENLIQ----SIREKERKFMEERDPAISQAKWRRQMIA---------SLP 544
D L E I S + K E D A + MI +LP
Sbjct: 333 PSRSLNFDTLEEETIVKDDISNESGDEKSNYEGDNASDDDSLLQSMIERPKTEPEKHNLP 392
Query: 545 KLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLS 604
+L N+IH +F S R+VITKEEL++KII++ + ITDRREVEEQ++LML+LVP+WISE +
Sbjct: 393 QLVNLIHRVFHSTNRTVITKEELLYKIIANQINITDRREVEEQLSLMLQLVPDWISETKA 452
Query: 605 SCGDLLVCINKMTCPESIRARLEES 629
S GDLLV INKM+ E++RARLEE+
Sbjct: 453 SSGDLLVRINKMSTAETVRARLEEA 477
>gi|297816766|ref|XP_002876266.1| hypothetical protein ARALYDRAFT_485876 [Arabidopsis lyrata subsp.
lyrata]
gi|297322104|gb|EFH52525.1| hypothetical protein ARALYDRAFT_485876 [Arabidopsis lyrata subsp.
lyrata]
Length = 475
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 100/142 (70%), Gaps = 2/142 (1%)
Query: 103 KLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILP 162
KLP ++ L E F+ LD IRLLKLK S T+ +ICPKIE LT+R FS HLAQ+K I P
Sbjct: 45 KLPERFEILEEFFNGLDTAIRLLKLKGSPTTYANICPKIEYLTNRIFSYDHLAQMKHIYP 104
Query: 163 EVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDFLKD 222
E I++K+VL + E T CMKP LH+++N DAI D + C +K + LR VF ++L+DF K
Sbjct: 105 EAIELKRVLKYVEDTCCMKPSLHISLNTDAIVLD-DTICGTKYMELRKVFHSKLVDFYKA 163
Query: 223 HPEGDEIPEETLPEPFNRSRSD 244
HP+ DE+P+E LPEPFN + D
Sbjct: 164 HPK-DEVPKELLPEPFNSPKRD 184
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 141/232 (60%), Gaps = 29/232 (12%)
Query: 422 SEQSTPAKLVSTPARLMIGTPALHQPKRCY-MTPE---NVSASSPNKLTRRPPHSRTLKS 477
++ STP+K +STP RLM TP L KRC +TPE + S S N L R P +
Sbjct: 240 NDSSTPSKDLSTPIRLMSATPTLQLSKRCIELTPEGGDDNSVRSTNSLARGPS-----RC 294
Query: 478 LKFDTPVKNATVEHKLNEDISVDGDVL-------------------DILPENLIQSIREK 518
L FDT ++A V+ + + + +GD L I+ +++ ++
Sbjct: 295 LNFDTLEEDAIVKDDIGNESADEGDGLLQSVKGSSRSLNFETLEEDTIVKDDISNESGDE 354
Query: 519 ERKFMEERDPAISQAKWRRQM-IASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQ 577
+ + + D ++ Q++ + ++ LP+L ++IH +F S R+VITKEEL+HKII++ +
Sbjct: 355 KINYEADNDDSLLQSRPKTELEQHKLPQLVDLIHRVFHSTNRTVITKEELLHKIIANQIN 414
Query: 578 ITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARLEES 629
ITDRREVEEQ++LML+LVP+WISE +S GDLLV INKM+ E++RA+LEE+
Sbjct: 415 ITDRREVEEQLSLMLQLVPDWISETKASSGDLLVSINKMSAAETVRAKLEEA 466
>gi|224078950|ref|XP_002305692.1| predicted protein [Populus trichocarpa]
gi|222848656|gb|EEE86203.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 155/591 (26%), Positives = 252/591 (42%), Gaps = 126/591 (21%)
Query: 100 GSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKF 159
G ++ ++ + E FDS++ +RLL ++ SPTF +I ++E LT R+FS GHLA++K+
Sbjct: 64 GELEILERHKTIVELFDSMNCSLRLLVMRKKSPTFQNISAQVEVLTQRKFSYGHLARIKY 123
Query: 160 ILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDF 219
+LPE IQ+ K+L D+K+ CMK D+ + V D +E + S + LR VF +RL+D+
Sbjct: 124 LLPEAIQMDKILVHDKKSLCMKSDMKIGVLFDVVEGHDE---ESDFIALRQVFASRLVDY 180
Query: 220 LKDHPEGD-------------------------------EIPEETLPEPFNRSRSDLQLN 248
HPE D +IP+ LP PFN+S+
Sbjct: 181 FIKHPEIDYWSAKYGTDLLLDKLWLLYMEPKMRKYTGACDIPQAILPGPFNQSK------ 234
Query: 249 MVKKSTSLTPADSPTDASVEQQQVSSPTCQNSKLLNIVKAPSISMVTGTSA----SASDN 304
D D S+ + C+ ++ AP M+T S +A ++
Sbjct: 235 ------EAAFEDKAGDHSM------AVFCEPFNEISETIAPE-PMITDQSREYLPAAIES 281
Query: 305 QQPIVASHF--SSRRHFSQKFVNSLAEKKKAERISSGVSIEPSTTPALEPCLRKISSIEE 362
Q SH S RHFSQK + +E++K + ++S V S + L E
Sbjct: 282 QMLSTPSHLRPSFNRHFSQK---TFSEEEKVQLLASPVPSSVSPSGDLH---------NE 329
Query: 363 TCSTAAISAV-ELSSKSTSKENCLTYCASPTRLSQSCPPVTPVKEIDPMESKVSYP-IKV 420
+ A + E SK + N R Q C P + +P+ S+ P +
Sbjct: 330 HLNEARTAEFPEFCSKFNFRTNL---DIESERARQLCIPYSKFTSFNPLPSQPINPEVSA 386
Query: 421 DSEQSTPAKLV--STPARLMIGTPALHQPKRCYMTPEN--VSASSPNKLTRRPPHSRTLK 476
D ST K S+ +L++ TPA P+R + ++ + + + P R L
Sbjct: 387 DVYTSTSPKCKPDSSVDKLLLETPAQSTPRRAMHSSDDQHMDTTGQKQTLSCKPAKRVL- 445
Query: 477 SLKFDTPVKNATVEHKLNED-----ISVDGDVLDILPENLIQSIREKERKFMEERDPAIS 531
+ K A+ ++ D ++ +L+ + +L S +++
Sbjct: 446 DFSYMEADKGASEYYEFLHDSSTQPLAGSSSLLEKVEGSLAHSSVDQK---------TCQ 496
Query: 532 QAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDR---------- 581
+QM LP L +++H +FQS+ S ITKEEL+HKII L I DR
Sbjct: 497 SDTVHQQMSIQLPDLVSLVHHIFQSVNFSPITKEELVHKIILDSLDIVDRSRSRWVSLYS 556
Query: 582 ---------------------REVEEQMNLMLELVPEWISEKLSSCGDLLV 611
EVEEQ+ ++ + VP+WI + GD+L
Sbjct: 557 STLHIFLIESLVSELTQSTFTGEVEEQIGILEKRVPDWICRLPTPSGDVLY 607
>gi|147791009|emb|CAN63578.1| hypothetical protein VITISV_002837 [Vitis vinifera]
Length = 516
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 103/170 (60%), Gaps = 14/170 (8%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY +AE FD ++ +RLL L+ TF +IC ++E LT R+FS HLAQ+K+ILPE
Sbjct: 153 LPDKYKTIAEFFDRMNCSLRLLGLRKKPTTFQNICTQVEILTKRKFSYRHLAQIKYILPE 212
Query: 164 VIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDFLKDH 223
V+Q +L D K+ CMKPD+ +++ D IE G + S + LR VF RL+DF H
Sbjct: 213 VVQXDYILIHDVKSLCMKPDMKISLLFDVIE--GHQE-KSTFMALRQVFAYRLLDFFNXH 269
Query: 224 PEGDEIPEETLPEPFNRSRSDLQLNMVKKSTSLTPADSPTDASVEQQQVS 273
PEG +IPE LPEPFN+ ++ ++ P P D+S+E Q S
Sbjct: 270 PEGCDIPEAILPEPFNQ-----------RTQNIIPKSLPVDSSIESQPTS 308
>gi|449509547|ref|XP_004163620.1| PREDICTED: CDT1-like protein a, chloroplastic-like [Cucumis
sativus]
Length = 363
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 114/206 (55%), Gaps = 16/206 (7%)
Query: 32 NPTQLASKTPEKQPSRRARNSRMALSLKEIRKAAQT----NPQQPPKDQIESAGKQI--- 84
+P L+SKTPEK R + ++ALS++E+ +AAQ+ N Q P D K +
Sbjct: 33 DPQSLSSKTPEKPAERTRKRKKVALSIEEVERAAQSVHESNSQLLPHDLTTEGSKVVRRR 92
Query: 85 ------SASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSIC 138
+ S S S KLP K+ L + FD L+ +RLL+ K + F+ +C
Sbjct: 93 MDSRSNESQSSSSDSTCVDNKYSNKLPEKFELLCKFFDCLNFAMRLLRCKGVASNFSHVC 152
Query: 139 PKIECLTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGK 198
KIE LTDRRFS HLAQLKFILPE I +KKV FDE T+ KP+LH++ N + D K
Sbjct: 153 SKIEVLTDRRFSYSHLAQLKFILPEAIVVKKVAVFDECTNWKKPELHISFNFGVLAVDSK 212
Query: 199 SKCNSKNLNLRTVFRARLMDFLKDHP 224
++ LR +FR +L +F+ D P
Sbjct: 213 ENHYTQ---LRKLFRIQLSEFIDDVP 235
>gi|326513686|dbj|BAJ87862.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520555|dbj|BAK07536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 561
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 101/164 (61%), Gaps = 6/164 (3%)
Query: 96 PAGSGSP---KLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLG 152
P GS SP +L K+ L F+ +++ IRLL L+ PTFT+I ++E LT R+F
Sbjct: 99 PDGSQSPASNELLEKHKNLLNLFNRMESSIRLLCLRKKMPTFTNIATQVEVLTKRKFLYS 158
Query: 153 HLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVF 212
HLAQ+K + PE IQI ++L D+K+ CM D+ +T+ D +EC+ + S + + F
Sbjct: 159 HLAQMKHLFPEAIQINRILLHDQKSLCMYADMEITLLNDVVECNNPQE--SPAMAICEAF 216
Query: 213 RARLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQLNMVKKSTSL 256
R++L+ FL H +G ++PE TLPEPFN SR +L L+ + S+
Sbjct: 217 RSKLLCFLGSHHKGIDVPEATLPEPFN-SREELYLDALHNDNSV 259
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 110/224 (49%), Gaps = 28/224 (12%)
Query: 423 EQSTPAKLVS-TPARLMIGTPALHQPKRCYMTPENVSASSPNKLTRRPPHSRTLKSLKFD 481
E STP + +S +P+ M TPA+ PKR TP +S + ++ +SL
Sbjct: 346 ENSTPKQGISNSPS--MAETPAMQTPKRPLPTPVAKHETSSRHGSEARSNNSARRSLIMF 403
Query: 482 TPVKNATVEHKLNEDISVDGDVLDILPENLIQSIREKE---------------RKFMEER 526
+P K NE S L ++ + SI E E + E
Sbjct: 404 SP-------SKFNESPSATDADTSKLDKDGVSSITEPEVTTGKCLFPEETVTFTDLLLEN 456
Query: 527 DPAISQ--AKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREV 584
D Q + ++ + SL F+++ + S K S+ITK+EL H I++++L+I + E+
Sbjct: 457 DNKTVQVSSTNSQEKLDSLRVTFDIVCGISGSTKNSLITKQELFHNILANNLEIEETGEI 516
Query: 585 EEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARLEE 628
EEQ++++ +L P+WIS++L G++L +++ +S+R RL E
Sbjct: 517 EEQLHILEDLSPDWISKELRG-GEILYSFKQISDQKSVRERLTE 559
>gi|356529410|ref|XP_003533285.1| PREDICTED: uncharacterized protein LOC100794715 [Glycine max]
Length = 539
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 101/181 (55%), Gaps = 12/181 (6%)
Query: 100 GSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKF 159
G LP KY L + F +RLL+L SPTF ++C ++E L+ R FS HLAQ+K+
Sbjct: 49 GQTNLPEKYSALVDLFGHTSCSLRLLRLCKKSPTFQNVCRQVEVLSKREFSHAHLAQMKY 108
Query: 160 ILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAI-ECDGKSKCNSKNLNLRTVFRARLMD 218
ILP+ + I KVL D+K+ CM PD+ +T+ + + +C G+ S +L LR F+++L+D
Sbjct: 109 ILPKSVCIDKVLVHDKKSLCMVPDMKITLRFEVVKDCSGE----SDDLALRRYFKSKLID 164
Query: 219 FLKDHPEGDEIPEETLPEPFNRSRSDLQLN-------MVKKSTSLTPADSPTDASVEQQQ 271
F HPE +IPE LPEPF + L V ST L + T+ EQ Q
Sbjct: 165 FFDMHPEVADIPEAPLPEPFGKKTCRLNFEEFTGQSPHVNSSTELLSISNQTEMLPEQLQ 224
Query: 272 V 272
+
Sbjct: 225 L 225
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 70/105 (66%), Gaps = 2/105 (1%)
Query: 524 EERDPAISQAKWRRQMIASLP--KLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDR 581
+E + ++ QA Q S P L N+IH +FQS++R ITKEEL+HKI+ + L +
Sbjct: 430 QEAEESLKQADLDTQHKKSSPLLDLVNVIHSIFQSVQRIPITKEELLHKILVNTLDFVEI 489
Query: 582 REVEEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARL 626
R VEEQ+ + +LVP+WI +KL + GD + CINK++ +S+R+RL
Sbjct: 490 RAVEEQIESLEKLVPDWICKKLVATGDTMYCINKVSDLDSVRSRL 534
>gi|293336788|ref|NP_001169160.1| uncharacterized protein LOC100383008 [Zea mays]
gi|238909020|gb|ACN31804.2| unknown [Zea mays]
gi|413919746|gb|AFW59678.1| hypothetical protein ZEAMMB73_723448 [Zea mays]
gi|413919747|gb|AFW59679.1| hypothetical protein ZEAMMB73_723448 [Zea mays]
Length = 562
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 104/183 (56%), Gaps = 11/183 (6%)
Query: 93 SVNPAGS-----GSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDR 147
SV+P+GS S +L K+ L F+ +++ IRLL L+ TF +I ++E LT R
Sbjct: 95 SVSPSGSRSLFLESIELLEKHKDLLNLFNRMESSIRLLHLRKKMATFNNIATQVEILTKR 154
Query: 148 RFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLN 207
+ HLAQ+K + PE IQIK++L DEK+ CM D+ +T+ D +EC S +S ++
Sbjct: 155 KLLYSHLAQMKHLFPEAIQIKRILVHDEKSICMYADMEITLVMDVVEC--TSPDHSLSMT 212
Query: 208 LRTVFRARLMDFLKDHPEGDEIPEETLPEPFN-RSRSDLQLNMVKKSTSLTPADSPTDAS 266
+ F ++L+ FL H +G +IPE LPEPFN R R L L V + P P +
Sbjct: 213 ICEAFYSKLLRFLDAHHKGADIPEAILPEPFNSRPREKLYLEAVHNGHAAEP---PLHGA 269
Query: 267 VEQ 269
VE+
Sbjct: 270 VEE 272
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 153/326 (46%), Gaps = 45/326 (13%)
Query: 329 EKKKAERISSGVSIEPSTTPALEPCLRKISSIEETCSTAAISAVELSSKSTSKENCLTYC 388
EK E + +G + EP A+E S + S + ++ + T K L+
Sbjct: 249 EKLYLEAVHNGHAAEPPLHGAVEEGFSNASHFPQ--SFQKFMSKKIIADGTEKTQLLS-- 304
Query: 389 ASPTRLSQSCPPVTPVKEIDPMESKVSYPIKVDSEQS-TPAKLV------STPAR----- 436
P LS T +P + P+ V+SE S TP++ + STP +
Sbjct: 305 -DPAELSSVSAYGTKGSNRNPKKQDEHAPVPVNSEISATPSRHLISCCQESTPKQQTSES 363
Query: 437 -LMIGTPALHQPKRCYMTPENVSASSPNKLTRRPPHSRTLKSL------KFDTPVKNATV 489
L+ GTPA+ PKR + P ++ ++ S +SL + +P +
Sbjct: 364 PLLSGTPAMQTPKRPLLAPLEKPKATCGHISEPRSASSARRSLNTSLTYEGGSPSYYDGM 423
Query: 490 EHK-------LNEDISVDGDVLDILPENLIQSIREKERKFMEERDPAISQAKW--RRQMI 540
EH ++ED+S + +S E F ++D I++ + ++ I
Sbjct: 424 EHTATAKKCMISEDLS-----------SFNKSFEEDSHVFFTDKD-KINEVESVDSQERI 471
Query: 541 ASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWIS 600
ASL F++++ + S K +ITK+EL H I++++L+I + E+EEQ++++ +L P+ IS
Sbjct: 472 ASLRTTFDIVYDISHSTKNPLITKQELFHNILANNLEIEEIGEIEEQLHILEDLAPDLIS 531
Query: 601 EKLSSCGDLLVCINKMTCPESIRARL 626
+K+ + G++L I +T S+RARL
Sbjct: 532 KKVINGGEILYSIEPITDKNSVRARL 557
>gi|226509726|ref|NP_001146884.1| CDT1a protein [Zea mays]
gi|195604716|gb|ACG24188.1| CDT1a protein [Zea mays]
Length = 561
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 132/247 (53%), Gaps = 16/247 (6%)
Query: 34 TQLASKTPEKQPSRRARNSRMALSLKEIRKAAQTNPQQPPKDQIESAGKQISASPSVKSS 93
+++ S TPEK R +R+ R+ +S A+ + +E G+ + S
Sbjct: 42 SEIESPTPEK---RESRSKRVVVSSLARNLLAERYRDRFSNQLVEDEGQ--TDDEDYNGS 96
Query: 94 VNPAGSGS-----PKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRR 148
V+P+GS S +L K+ L F+ +++ IRLL L+ TF +I ++E LT R+
Sbjct: 97 VSPSGSQSLFSESIELLDKHKDLLSLFNRMESSIRLLHLRKKMATFNNIATQVEILTKRK 156
Query: 149 FSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNL 208
HLAQ+K +LPE IQIK++L DEK+ CM D+ +T+ D +EC S S ++ +
Sbjct: 157 LLYSHLAQMKHLLPEAIQIKRILVHDEKSLCMYADMEITLLMDVVEC--TSPDQSPSMTI 214
Query: 209 RTVFRARLMDFLKDHPEGDEIPEETLPEPFN-RSRSDLQLNMVKKSTSLTPADSPTDASV 267
F ++L+ FL H +G +IPE LPE FN + R L L V + A+SP +
Sbjct: 215 CEAFYSKLLSFLDAHHKGADIPEAILPELFNSKPREKLYLEAVHNGYA---AESPLQGAT 271
Query: 268 EQQQVSS 274
E++ +++
Sbjct: 272 EERFINA 278
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 41/227 (18%)
Query: 423 EQSTPAKLVSTPARLMIGTPALHQPKR------------CYMTPENVSASSPNKLTRRPP 470
++ TP K ++ + L GTP + PKR C E SASS RR
Sbjct: 353 QEGTP-KQGTSESPLFSGTPVMQTPKRQLPTSLDKPKATCGHISEPCSASS----ARRSL 407
Query: 471 HSRTLKSLKFDTPVKNATVEHKLNEDISVDGDVLDILPENLIQSIREKERKFMEERDPAI 530
+ TL + +P + VEH D + +I K EE P +
Sbjct: 408 N--TLLKFEVGSPYYDG-VEHT------------DTTKKGMISEDSSYFNKSFEEDSPVL 452
Query: 531 SQAKWR---------RQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDR 581
K + ++ IASL F+++ + K S+ITK+EL H I++++L+I +
Sbjct: 453 FIDKDKIDEVDSVDSQEKIASLHTTFDIVCDISHPTKNSLITKQELFHNILANNLEIEEI 512
Query: 582 REVEEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARLEE 628
E+EEQ+N++ +L P+ IS+K+ + G++L I ++ S+RARL E
Sbjct: 513 GEIEEQLNILEDLAPDLISKKMINGGEILYSIQPISDQNSVRARLVE 559
>gi|242074578|ref|XP_002447225.1| hypothetical protein SORBIDRAFT_06g030850 [Sorghum bicolor]
gi|241938408|gb|EES11553.1| hypothetical protein SORBIDRAFT_06g030850 [Sorghum bicolor]
Length = 562
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 102/184 (55%), Gaps = 11/184 (5%)
Query: 93 SVNPAGS-----GSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDR 147
SV+P+GS S +L K+ L F+ +++ IRLL L+ TF +I ++E L R
Sbjct: 96 SVSPSGSRSLFPESIELLEKHKDLLNLFNRMESSIRLLHLRKKMATFNNIATQVEILAKR 155
Query: 148 RFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLN 207
+ HLAQ+K + PE IQIK++L DEK+ CM D+ +T+ D +EC S S ++
Sbjct: 156 KLLYSHLAQMKHLFPEAIQIKRILVHDEKSLCMYADMEITLVMDVVEC--TSPDQSPSMT 213
Query: 208 LRTVFRARLMDFLKDHPEGDEIPEETLPEPFN-RSRSDLQLNMVKKSTSLTPADSPTDAS 266
+ F ++L+ FL H +G +IPE LPEPFN R R L L V + P P +
Sbjct: 214 ICEAFYSKLLRFLDAHHKGADIPEAILPEPFNSRPRDKLYLEAVHNGHAAEP---PMQGA 270
Query: 267 VEQQ 270
E++
Sbjct: 271 AEEE 274
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 115/225 (51%), Gaps = 36/225 (16%)
Query: 423 EQSTPAKLVSTPARLMIGTPALHQPKR------------CYMTPENVSASSPNKLTRRPP 470
++STP K ++ + L+ GTPA+ P R C E SASS RR
Sbjct: 353 QESTP-KQGTSESPLLSGTPAMQTPNRPLPTPLEKPKVTCGHISEPRSASS----ARRSL 407
Query: 471 HSRTLKSLKFD--TPVKNATVEHKLNED---ISVDGDVLDILPENLIQSIREKERKFMEE 525
++ SLKF+ +P +EH + IS D + +S E F +
Sbjct: 408 NT----SLKFEGGSPSYYDGMEHTTTAEKGIISEDSSSFN-------KSFEEDSPVFFTD 456
Query: 526 RDP--AISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRRE 583
+D + + +M ASL F+++ + +S K S+ITK+EL H I++++L+I + E
Sbjct: 457 KDKINEVDSVDTQERM-ASLHTTFDIVCDISRSTKNSLITKQELFHNILANNLEIEEIGE 515
Query: 584 VEEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARLEE 628
+EEQ++++ +L P IS+K+ + G++L I +T S+RARL E
Sbjct: 516 IEEQLHILEDLAPSLISKKVINGGEILYSIEPITDQNSVRARLVE 560
>gi|357499699|ref|XP_003620138.1| Mitochondrial protein, putative [Medicago truncatula]
gi|355495153|gb|AES76356.1| Mitochondrial protein, putative [Medicago truncatula]
Length = 622
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 136/521 (26%), Positives = 221/521 (42%), Gaps = 96/521 (18%)
Query: 103 KLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILP 162
+LP KY + + F + +RLL L+ SPTF +IC K+E L R FS HLAQ+K+ILP
Sbjct: 53 QLPEKYKNIGDLFSDMSCALRLLHLRKKSPTFQNICNKVEVLAKRNFSYAHLAQMKYILP 112
Query: 163 EVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDFLKD 222
+ I+I+KV+ D KS C +L + VF D ++D
Sbjct: 113 KGIEIEKVVVV----------------------DKKSLCMKPDLKITLVF-----DVVED 145
Query: 223 HPEGDEIPEETLPEPFNRSRSDLQLNMVKKSTSLTPADSPTDASVEQQQVSSPTCQNSKL 282
H E + + L FN + N+ + T + A P P Q
Sbjct: 146 HSE--QSADLALIRYFNSKLINF-FNLHPEVTDIPEAALP-----------EPFSQRPYN 191
Query: 283 LNIVKAPSISMVTGTSASASDNQQPIVASHFS--SRRHFSQKFVNSLAEKKKAERISSGV 340
L I K ++++ S+++++ + + H S +RHFSQK V + E + S
Sbjct: 192 L-IFKDGTVNLSKELSSTSNEIELSLNNLHLSPSFKRHFSQKNV-----ANETELVQSFS 245
Query: 341 SIEPSTTPALEPCLRKISSIEETCSTAAISAVELSSKSTSKENCLTYCASPTRLSQSCPP 400
S E S + C + VE + S+ C+ Q
Sbjct: 246 SSENSMSSHESDC----------------NNVERGKQKESQSMCI----------QQNVI 279
Query: 401 VTPVKEIDPMESKVSYPIKVDSEQSTPAKLVSTPARLMIGTPALHQPKRCYMTPE----- 455
TPV K+ +P V +S K+VS L+ TPA P+R + +
Sbjct: 280 NTPVH-------KIYHPHSVSRIESPDLKIVSCTDSLLTHTPAQSAPERLLLGSDVKLQK 332
Query: 456 ---NVSASSPNKLTRRPPHSRTLKSLKFDTPVKNATVEHKLNEDISVDGDVLDILPENLI 512
S S R + T S FD+ V + +ED V P+ +
Sbjct: 333 MTAQKSGSCFKPAKRVLDFTLTEGSDAFDSRVDMSKPSRGCSEDFKSFDSVSP--PQEVD 390
Query: 513 QSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKII 572
+++ +K ++ ++ +SL +L N+I +F S+KR+ +TKEEL+ KI+
Sbjct: 391 ENLSHSFQKINVDQHCLVAS----DNNPSSLVELVNVIDSIFDSVKRTSMTKEELLQKIM 446
Query: 573 SSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCI 613
+ L RE EEQ+ ++ + VP+W+ +K+ S GD + C+
Sbjct: 447 MNCLDFVKIREAEEQIEILEKTVPDWLCKKVVSSGDTMYCV 487
>gi|223942785|gb|ACN25476.1| unknown [Zea mays]
gi|414585105|tpg|DAA35676.1| TPA: CDT1a protein [Zea mays]
Length = 561
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 96/169 (56%), Gaps = 6/169 (3%)
Query: 103 KLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILP 162
+L K+ L F+ +++ IRLL L+ TF +I ++E LT R+ HLAQ+K + P
Sbjct: 111 ELLDKHKDLLSLFNRMESSIRLLHLRKKMATFNNIATQVEILTKRKLLYSHLAQMKHLFP 170
Query: 163 EVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDFLKD 222
E IQIK++L DEK+ CM D+ +T+ D +EC S S ++ + F ++L+ FL
Sbjct: 171 EAIQIKRILVHDEKSLCMYADMEITLLMDVVEC--TSPDQSPSMTICEAFYSKLLSFLDA 228
Query: 223 HPEGDEIPEETLPEPFN-RSRSDLQLNMVKKSTSLTPADSPTDASVEQQ 270
H +G +IPE LPE FN + R L L V + A+SP + E++
Sbjct: 229 HHKGADIPEAILPELFNSKPREKLYLEAVHNGYA---AESPLQGATEER 274
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 35/224 (15%)
Query: 423 EQSTPAKLVSTPARLMIGTPALHQPKR------------CYMTPENVSASSPNKLTRRPP 470
++ TP K ++ + L GTP + PKR C E SASS RR
Sbjct: 353 QEGTP-KQGTSESPLFSGTPVMQTPKRQLPTSLDKPKATCGHISEPCSASS----ARRSL 407
Query: 471 HSRTLKSLKFDTPVKNATVEHKLNEDISVDGDVLDILPENLIQSIREK------ERKFME 524
+ TL + +P + VEH D + G ++ N +S E ++ ++
Sbjct: 408 N--TLLKFEVGSPYYDG-VEHT---DTTKKG-MISEDSSNFNKSFEEDSPVLFIDKDKID 460
Query: 525 ERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREV 584
E D SQ K IASL F+++ + K S+ITK+EL H I++++L+I + E+
Sbjct: 461 EVDSVDSQEK-----IASLHTTFDIVCDISHPTKNSLITKQELFHNILANNLEIEEIGEI 515
Query: 585 EEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARLEE 628
EEQ+N++ +L P+ IS+K+ + G++L I ++ S+R RL E
Sbjct: 516 EEQLNILEDLAPDLISKKMINGGEILYSIQPISDQNSVRVRLVE 559
>gi|357146766|ref|XP_003574103.1| PREDICTED: CDT1-like protein a, chloroplastic-like [Brachypodium
distachyon]
Length = 556
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 89/154 (57%), Gaps = 9/154 (5%)
Query: 88 PSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDR 147
PSV S N +L KY L F+ +++ IRLL+L+ TF +I ++E LT
Sbjct: 98 PSVDSQSN-------RLLEKYKNLLNLFNRMESSIRLLRLRKKMATFKNIATQVEVLTKS 150
Query: 148 RFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLN 207
+F HLAQ+K + PE I+I ++L DEK+ CM D+ + + DA+EC + S ++
Sbjct: 151 KFLYAHLAQMKHLFPEAIEINRILLHDEKSLCMYADMEIILRMDAVECSNPDE--SPSMA 208
Query: 208 LRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRS 241
+ FR++L+ FL+ H + IPE TLP PF+ S
Sbjct: 209 ICEAFRSKLLSFLESHHKDINIPEATLPAPFDSS 242
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 111/221 (50%), Gaps = 24/221 (10%)
Query: 423 EQSTPAKLVSTPARLMIGTPALHQPKRCYMTP--------ENVSASSPNKLTRRPPHSRT 474
++STP K ++ + LM TPA+ PKR TP + S + RR +
Sbjct: 343 QESTP-KQGTSDSPLMAETPAMQTPKRPLPTPLGKFDTSCRHGSEARSTSSARRSLIMFS 401
Query: 475 LKSLKFDTPVKNATVEHKLNEDISVD----GDVLDILPENLIQSIR---EKERKFMEERD 527
L ++P +A KL++D++ D G L PE SI E +R+ +
Sbjct: 402 ASKLDDESPSDHAIDTSKLDKDVTEDEVPTGKCL--FPEETCTSIDLLVENDREKTNQVP 459
Query: 528 PAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREVEEQ 587
SQ K + SL F+++ + S K S+ITK+EL H I++++L+I E+EE
Sbjct: 460 STNSQEK-----LDSLRVTFDIVCGISGSTKSSLITKQELFHNILANNLEIEGTGEIEEH 514
Query: 588 MNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARLEE 628
++++ +L P+WIS+KL ++L I ++ +S R RL E
Sbjct: 515 LHILEDLSPDWISKKLRG-EEILYSIKQIPDQKSFRERLVE 554
>gi|297737211|emb|CBI26412.3| unnamed protein product [Vitis vinifera]
Length = 458
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 116/252 (46%), Gaps = 78/252 (30%)
Query: 118 LDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKT 177
++ +RLL L+ TF +IC ++E LT R+FS HLAQ+K+ILPEV+QI +L D K+
Sbjct: 1 MNCSLRLLGLRKKPTTFQNICTQVEILTKRKFSYRHLAQIKYILPEVVQIDYILIHDVKS 60
Query: 178 SCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDFLKDHPE------------ 225
CMKPD+ +++ D IE G + S + LR VF RL+DF HPE
Sbjct: 61 LCMKPDMKISLLFDVIE--GHQE-KSTFMALRQVFAYRLLDFFNIHPEVIAAALLLLVTY 117
Query: 226 -----------------------GDEIPEETLPEPFNRSRSDLQLNMVKKSTSLTPADSP 262
G +IPE LPEPFN +++ ++ P P
Sbjct: 118 RWHVTIFSQDLFELNSVLFFGEQGCDIPEAILPEPFN-----------QRTQNIIPKSLP 166
Query: 263 TDASVEQQQVSSPTCQNSKLLNIVKAPSISMVTGTSASASDNQQPIVASHFSSRRHFSQK 322
D+S+E Q PT + L N S + P S RRHFS+K
Sbjct: 167 VDSSIESQ----PTSEVELLAN-----------------SCHLNP------SFRRHFSEK 199
Query: 323 FVNSLAEKKKAE 334
V +AE K +
Sbjct: 200 AV--VAETGKTQ 209
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 61/91 (67%)
Query: 536 RRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELV 595
+ Q+ L L +IH +F S+ ITKEEL+HKII ++ I +RRE+EEQ+ L+ +L+
Sbjct: 355 KGQVSTCLVDLVALIHRIFLSLGCFSITKEELVHKIIMNNCDIIERREIEEQIELLEKLI 414
Query: 596 PEWISEKLSSCGDLLVCINKMTCPESIRARL 626
PEWI KL+ CGDLL I K + +S+ ARL
Sbjct: 415 PEWIFRKLAPCGDLLYSIRKESNLDSVCARL 445
>gi|218184792|gb|EEC67219.1| hypothetical protein OsI_34122 [Oryza sativa Indica Group]
Length = 439
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 93/163 (57%), Gaps = 9/163 (5%)
Query: 90 VKSSVNPAGSGSPK-----LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECL 144
V S++ +G+ SPK L K+ L F+ + + IRLL L+ TF +I ++E L
Sbjct: 100 VSESIDISGT-SPKDKSNDLLEKHNNLLNLFNRMVSSIRLLHLRKKMTTFKNIATQVEIL 158
Query: 145 TDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSK 204
T R F HLAQ+K + PE IQIKK+L DEK+ CM D+ +T+ D +E S S
Sbjct: 159 TKREFLYTHLAQMKHLFPEAIQIKKILLHDEKSLCMYADMEITILMDTVE--SSSPDQSL 216
Query: 205 NLNLRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQL 247
++ + F ++L+ FL H + +IPE LPEPFN SR L L
Sbjct: 217 SMAICEAFHSKLLSFLDAHHKDIDIPEAMLPEPFN-SRDKLHL 258
>gi|125532452|gb|EAY79017.1| hypothetical protein OsI_34126 [Oryza sativa Indica Group]
Length = 570
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 93/163 (57%), Gaps = 9/163 (5%)
Query: 90 VKSSVNPAGSGSPK-----LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECL 144
V S++ +G+ SPK L K+ L F+ + + IRLL L+ TF +I ++E L
Sbjct: 97 VSESIDISGT-SPKDKSNDLLEKHNNLLNLFNRMVSSIRLLHLRKKMTTFKNIATQVEIL 155
Query: 145 TDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSK 204
T R F HLAQ+K + PE IQIKK+L DEK+ CM D+ +T+ D +E S S
Sbjct: 156 TKREFLYTHLAQMKHLFPEAIQIKKILLHDEKSLCMYADMEITILMDTVE--SSSPDQSL 213
Query: 205 NLNLRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQL 247
++ + F ++L+ FL H + +IPE LPEPFN SR L L
Sbjct: 214 SMAICEAFHSKLLSFLDAHHKDIDIPEAMLPEPFN-SRDKLHL 255
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 71/104 (68%), Gaps = 5/104 (4%)
Query: 525 ERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREV 584
E DPA SQ K IASL F+++ + +S K S+ITK+EL H I++++L+I + E+
Sbjct: 470 EVDPAESQEK-----IASLQLTFDIVCDISRSTKNSLITKQELFHNILANNLEIEETGEI 524
Query: 585 EEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARLEE 628
EEQ++++ +L P+WIS+K+ GD+L I ++ +S+RARL E
Sbjct: 525 EEQLHILEDLSPDWISKKVIPGGDILYSIKEIADQKSVRARLVE 568
>gi|40539114|gb|AAR87370.1| expressed protein [Oryza sativa Japonica Group]
gi|78708839|gb|ABB47814.1| expressed protein [Oryza sativa Japonica Group]
gi|125575225|gb|EAZ16509.1| hypothetical protein OsJ_31981 [Oryza sativa Japonica Group]
gi|215768881|dbj|BAH01110.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 573
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 93/163 (57%), Gaps = 9/163 (5%)
Query: 90 VKSSVNPAGSGSPK-----LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECL 144
V S++ +G+ SPK L K+ L F+ + + IRLL L+ TF +I ++E L
Sbjct: 100 VSESIDISGT-SPKDRSNDLLEKHNNLLNLFNRMMSSIRLLHLRKKMTTFKNIATQVEIL 158
Query: 145 TDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSK 204
T R F HLAQ+K + PE IQIKK+L DEK+ CM D+ +T+ D +E S S
Sbjct: 159 TKREFLYTHLAQMKHLFPEAIQIKKILLHDEKSLCMYADMEITILMDTVE--SSSPDQSL 216
Query: 205 NLNLRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQL 247
++ + F ++L+ FL H + +IPE LPEPFN SR L L
Sbjct: 217 SMAICEAFHSKLLSFLDAHHKDIDIPEAMLPEPFN-SRDKLHL 258
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 71/104 (68%), Gaps = 5/104 (4%)
Query: 525 ERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREV 584
E DPA SQ K IASL F+++ + +S K S+ITK+EL H I++++L+I + E+
Sbjct: 473 EVDPAESQEK-----IASLQLTFDIVCDISRSTKNSLITKQELFHNILANNLEIEETGEI 527
Query: 585 EEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARLEE 628
EEQ++++ +L P+WIS+K+ GD+L I ++ +S+RARL E
Sbjct: 528 EEQLHILEDLSPDWISKKVIPGGDILYSIKEIADQKSVRARLVE 571
>gi|449520851|ref|XP_004167446.1| PREDICTED: uncharacterized LOC101207649 [Cucumis sativus]
Length = 433
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 128/269 (47%), Gaps = 53/269 (19%)
Query: 103 KLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILP 162
KL K + E F + +RLLK++ TF ++ ++ +T R F HLAQ+ +I+P
Sbjct: 56 KLQEKCRAIVEFFTCFTSSLRLLKMRKRMSTFHNVSGQVSIMTKRMFLDKHLAQILYIIP 115
Query: 163 EVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDFLKD 222
E + I KV+ D+KT CMKP++ + + D ++ G S+ +S L L VF +R+ +
Sbjct: 116 EAVNIDKVMIHDKKTLCMKPEMIINLQLDVVK--GHSE-HSDFLALHKVFASRVSKYFAM 172
Query: 223 HPEGDEIPEETLPEPFNRSRSDLQLNMVKKSTSL----TPADSPTDASVEQQQVSSPTCQ 278
HPE E+PE LP PFNR R L+ + ++S DS +D ++E+
Sbjct: 173 HPEKSEVPEGELPWPFNR-RKIFSLDQLFDNSSARSRPISIDSDSDLTLEE--------- 222
Query: 279 NSKLLNIVKAPSISMVTGTSASASDNQQPIVASHFSSRRHFSQKFVNSLAEKKKAERISS 338
+ H S +RHFS+KF++S+ + +E ++S
Sbjct: 223 ------------------------------LCPHLSFKRHFSKKFISSI---EISELVAS 249
Query: 339 GVSIEPSTTPALEPCLRKISSIEETCSTA 367
+ + PS L L I +I +TA
Sbjct: 250 SIVVSPSIPGKL---LEDIPTISPQVATA 275
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 543 LPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDR 581
LP+L +++ +F+S+ S ITKEEL+HKII + L IT+R
Sbjct: 387 LPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITER 425
>gi|168006432|ref|XP_001755913.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692843|gb|EDQ79198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 73/112 (65%)
Query: 499 VDGDVLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIK 558
D +++ LP L+ S+ ++E + EE+ + + R+QM+A LP LFN + +FQS
Sbjct: 757 ADLNMIQGLPAELVNSVIKEELRVAEEKSSDVVAVRRRQQMMAGLPNLFNQLCLIFQSSN 816
Query: 559 RSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLL 610
+SV ++L+ KI+SS+ ++TDR EVEE++ ++ EL PEWIS K S GD L
Sbjct: 817 KSVFPYKDLLAKIVSSNTEMTDRVEVEERLKMLTELAPEWISAKKSLTGDTL 868
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 133/282 (47%), Gaps = 38/282 (13%)
Query: 103 KLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILP 162
+LP K+ L +D ++A I LL ++ TF ++C +E T RRF HLAQ+K+ILP
Sbjct: 175 QLPEKFALLESFYDGVEAAISLLGIRRQLCTFQAVCSTVEATTKRRFLQKHLAQIKYILP 234
Query: 163 EVIQIKKVLTFDEKTSCMKPDLHVT---VNADAIECDGKSKCNSK-----NLNLRTVFRA 214
E + ++ V ++D+++ + +L V+ + A A E C SK ++ R VF +
Sbjct: 235 EAVHLEYVRSYDQESRIKRWELKVSLLPLPAAAEEPSVSGGCTSKRPKIESVQRRLVFHS 294
Query: 215 RLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQLNMVKKSTSLTPADSPTDAS-VEQQQVS 273
RL+ PE D+IP +PE S + +T+ P + T A VE ++ S
Sbjct: 295 RLVKLAATLPEDDDIPAHPMPERIFNGNSKGANTGLPAATTCIPMEINTAAHRVEMRESS 354
Query: 274 SPTCQNSKLLNIVKAPSISMVTGTSASA---SDNQQPIVAS-HFSSR--------RHFSQ 321
+ +K + P S +T +SAS+ SD +P +S H + S
Sbjct: 355 DGSTCFTKSVR----PGFSQMTASSASSLMESDKAEPQKSSLHMETLDTILPMPINRTSH 410
Query: 322 KFVNSLAEKKKAERISSGVSIEPSTTPALEPCLRKISSIEET 363
+ V++LAEK P+ TP L P R S++ +
Sbjct: 411 RDVHNLAEK-------------PTGTPHLAPSFRPFFSVKNS 439
>gi|449439523|ref|XP_004137535.1| PREDICTED: uncharacterized protein LOC101207649 [Cucumis sativus]
Length = 353
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 114/239 (47%), Gaps = 53/239 (22%)
Query: 133 TFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADA 192
TF ++ ++ +T R F HLAQ+ +I+PE + I KV+ D+KT CMKP++ + + D
Sbjct: 7 TFHNVSGQVSIMTKRMFLDKHLAQILYIIPEAVNIDKVMIHDKKTLCMKPEMIINLQLDV 66
Query: 193 IECDGKSKCNSKNLNLRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQLNMVKK 252
++ G S+ +S L L VF +R+ + HPE E+PE LP PFNR R L+ +
Sbjct: 67 VK--GHSE-HSDFLALHKVFASRVSKYFAMHPEKSEVPEGELPWPFNR-RKIFSLDQLFD 122
Query: 253 STSL----TPADSPTDASVEQQQVSSPTCQNSKLLNIVKAPSISMVTGTSASASDNQQPI 308
++S DS +D ++E+
Sbjct: 123 NSSARSRPISIDSDSDLTLEE--------------------------------------- 143
Query: 309 VASHFSSRRHFSQKFVNSLAEKKKAERISSGVSIEPSTTPALEPCLRKISSIEETCSTA 367
+ H S +RHFS+KF++S+ + +E ++S + + PS L L I +I +TA
Sbjct: 144 LCPHLSFKRHFSKKFISSI---EISELVASSIVVSPSIPAKL---LEDIPTISPQVATA 196
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 543 LPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDR 581
LP+L +++ +F+S+ S ITKEEL+HKII + L IT+R
Sbjct: 308 LPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITER 346
>gi|168031326|ref|XP_001768172.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680610|gb|EDQ67045.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 788
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 15/161 (9%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP K+ L ++ ++A + LL ++C TF ++C +E T RRF HLAQ+K ILPE
Sbjct: 75 LPEKFALLESFYEGVEAAVSLLGIRCQLCTFQAVCATVEATTKRRFLQKHLAQIKHILPE 134
Query: 164 VIQIKKVLTFDEKTSCMKPDLHVTV---NADAIECDGKSKCNSK-----NLNLRTVFRAR 215
+ ++ V +D+++ K +L + + A+ E KC SK ++ R VF R
Sbjct: 135 AVDLEYVRLYDQESYTRKWELKIALLPMPAEETEPIRDGKCTSKKPKIESVQRRRVFHTR 194
Query: 216 LMDFLKDHPEGDEIPEETLPE-PFN------RSRSDLQLNM 249
L F H E D+IP +PE PFN R +D+ + M
Sbjct: 195 LARFAVTHSEDDDIPAHPMPERPFNGNSTFKRGFTDMPVAM 235
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 75/128 (58%), Gaps = 2/128 (1%)
Query: 501 GDVLDI--LPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIK 558
D+L I +P L+ S+ +E + EE + + +QM A + LF+ + + QS
Sbjct: 658 ADMLMIQGIPSKLVNSVLREELRVAEENRDDVVALRRHQQMKAGITLLFDQLRLIVQSSN 717
Query: 559 RSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINKMTC 618
+SV ++L+ K++SS+ ++TDR EVE ++NL++EL PEWIS K S GD L I+K
Sbjct: 718 KSVFPCKKLLSKLVSSNTEMTDRTEVEVRLNLLMELAPEWISAKPSLAGDTLYRIDKNAD 777
Query: 619 PESIRARL 626
+R RL
Sbjct: 778 VMGVRKRL 785
>gi|414585104|tpg|DAA35675.1| TPA: hypothetical protein ZEAMMB73_106478 [Zea mays]
Length = 414
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 6/132 (4%)
Query: 144 LTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNS 203
L R+ HLAQ+K + PE IQIK++L DEK+ CM D+ +T+ D +EC S S
Sbjct: 5 LHYRKLLYSHLAQMKHLFPEAIQIKRILVHDEKSLCMYADMEITLLMDVVEC--TSPDQS 62
Query: 204 KNLNLRTVFRARLMDFLKDHPEGDEIPEETLPEPFN-RSRSDLQLNMVKKSTSLTPADSP 262
++ + F ++L+ FL H +G +IPE LPE FN + R L L V + A+SP
Sbjct: 63 PSMTICEAFYSKLLSFLDAHHKGADIPEAILPELFNSKPREKLYLEAVHNGYA---AESP 119
Query: 263 TDASVEQQQVSS 274
+ E++ +++
Sbjct: 120 LQGATEERFLNA 131
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 35/224 (15%)
Query: 423 EQSTPAKLVSTPARLMIGTPALHQPKR------------CYMTPENVSASSPNKLTRRPP 470
++ TP K ++ + L GTP + PKR C E SASS RR
Sbjct: 206 QEGTP-KQGTSESPLFSGTPVMQTPKRQLPTSLDKPKATCGHISEPCSASS----ARRS- 259
Query: 471 HSRTLKSLKFDTPVKNATVEHKLNEDISVDGDVLDILPENLIQSIREK------ERKFME 524
TL + +P + VEH D + G + + N +S E ++ ++
Sbjct: 260 -LNTLLKFEVGSPYYDG-VEHT---DTTKKGMISED-SSNFNKSFEEDSPVLFIDKDKID 313
Query: 525 ERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREV 584
E D SQ K IASL F+++ + K S+ITK+EL H I++++L+I + E+
Sbjct: 314 EVDSVDSQEK-----IASLHTTFDIVCDISHPTKNSLITKQELFHNILANNLEIEEIGEI 368
Query: 585 EEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARLEE 628
EEQ+N++ +L P+ IS+K+ + G++L I ++ S+R RL E
Sbjct: 369 EEQLNILEDLAPDLISKKMINGGEILYSIQPISDQNSVRVRLVE 412
>gi|449510874|ref|XP_004163794.1| PREDICTED: uncharacterized protein LOC101232727 [Cucumis sativus]
Length = 263
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 96/192 (50%), Gaps = 37/192 (19%)
Query: 153 HLAQLKFIL---PEVIQI--KKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLN 207
H L F L P +I I KKV+ +DE+TSCMKPDLH++ N +E + +
Sbjct: 91 HPTSLTFALRSKPSLIAIVLKKVVVYDERTSCMKPDLHISFNFGVLENK-----EDQYMQ 145
Query: 208 LRTVFRARLMDFLKDHPEGDEIPEETLPEPFNRSRSDLQLNMVKKSTSLTPADSPTDASV 267
LR +FRARL +F+ H E D++P++ LP PFN ++ V KS L SP S+
Sbjct: 146 LRKLFRARLSEFVSSHRESDDVPKDLLPNPFNFRSQEV----VAKSNLL----SPIKTSI 197
Query: 268 EQQQVSSPT-----------CQNSKLLNIVKAPSISMVTGTSASASDNQQPIVASHF--S 314
EQ P + ++ IVK SI VTG + ++ I SHF S
Sbjct: 198 EQLAPEQPMPSIEGISFNHHSEENQGFRIVK--SIMHVTG----PTKQKEFIGLSHFSPS 251
Query: 315 SRRHFSQKFVNS 326
R FSQK V++
Sbjct: 252 FSRRFSQKVVDT 263
>gi|413919657|gb|AFW59589.1| hypothetical protein ZEAMMB73_140082 [Zea mays]
Length = 293
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 106 AKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVI 165
A++ L F+ +++ IRLL+L+ TF +I ++E L R+ S HLAQ+K++ PE I
Sbjct: 71 ARHKDLLNLFNRMESSIRLLRLRKRMATFNNIATQVEILAKRKLSYCHLAQMKYLFPEAI 130
Query: 166 QIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDFLKDH 223
QIK+VL DEK+ CM D+ + + D +E S +S ++ + F ++L+ F H
Sbjct: 131 QIKRVLLHDEKSLCMYADMKIILVMDVVEY--TSPDHSPSMAICDAFYSKLLTFSDAH 186
>gi|302756699|ref|XP_002961773.1| hypothetical protein SELMODRAFT_403930 [Selaginella moellendorffii]
gi|300170432|gb|EFJ37033.1| hypothetical protein SELMODRAFT_403930 [Selaginella moellendorffii]
Length = 414
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 13/141 (9%)
Query: 105 PAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEV 164
PA L E F++L++ + LLK++ S TF ++ +E LT RRF HLA++K++ PE
Sbjct: 33 PASKRALEEFFEALESTVALLKIRKQSCTFAAVSAPVEALTKRRFLRSHLAKIKYLFPEA 92
Query: 165 IQIKKVLTFDEKTSCMKPDLHVTVNADAIE--------CDGKS-KCNSKNLNLRTVFRAR 215
++ D TS +K D+ + + + E G + K ++ + R F+ R
Sbjct: 93 VECDSFTWKDPDTSSLKTDIRIKLLPFSPEQPASVSKSVSGMARKWSADTVARRREFQKR 152
Query: 216 LMDFLKDHPEGDEIPEETLPE 236
+ F KD DE+PE L E
Sbjct: 153 IAAFEKD----DEVPEAQLVE 169
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 96/178 (53%), Gaps = 8/178 (4%)
Query: 437 LMIGTPALHQPKRCYMTPENVSAS--SPNKLTRRPPHSRTLKSLKFD--TPVKNATVEHK 492
L +P P+ C + P + + P+ +R + TL + D TP + +V
Sbjct: 239 LQQASPEPETPQTCKVAPRATTGAFTGPDSTSRLYASADTLPKIDHDAPTPPRRQSVVKS 298
Query: 493 LNEDISVDGDVLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHF 552
L + +L+ +P +L+ S+ EKE+K +E S K R+QM++ LP NM
Sbjct: 299 LQFGSAEKKKILESIPNDLLHSVHEKEQKELE----EKSIDKRRQQMLSGLPHFLNMTRL 354
Query: 553 LFQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLL 610
+FQS+ RS + ++L+ +I SS +ITD+ E+EE++ L+LEL PEWIS + S G L
Sbjct: 355 IFQSLGRSTMLHKDLVEQIESSATEITDKNEIEERLQLLLELAPEWISSRASLVGGTL 412
>gi|302762841|ref|XP_002964842.1| hypothetical protein SELMODRAFT_439071 [Selaginella moellendorffii]
gi|300167075|gb|EFJ33680.1| hypothetical protein SELMODRAFT_439071 [Selaginella moellendorffii]
Length = 432
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%)
Query: 437 LMIGTPALHQPKRCYMTPENVSAS--SPNKLTRRPPHSRTLKSLKFD--TPVKNATVEHK 492
L +P P+ C + P + + P+ +R + L + D TP + +V
Sbjct: 239 LQQASPEPETPQTCKVAPRATTGAFTGPDSTSRLYASADALPKIDHDAPTPPRRQSVVKS 298
Query: 493 LNEDISVDGDVLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHF 552
L + +L+ +P +L+ S+ EK ++ S K R+QM++ LP NM
Sbjct: 299 LQFGSAEKKKILESIPNDLLHSVHEK----EQKELEEKSIDKRRQQMLSGLPHFLNMTRL 354
Query: 553 LFQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVC 612
+FQS+ RS + ++L+ +I SS +ITD+ E+EE++ L+LEL PEWIS + S G L
Sbjct: 355 IFQSLGRSTMLHKDLVEQIESSATEITDKNEIEERLQLLLELAPEWISSRASLVGGTLYR 414
Query: 613 INKMTCPESIRARL 626
+ K +IR R+
Sbjct: 415 VQKTAEFSTIRKRM 428
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 13/135 (9%)
Query: 111 LAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKV 170
L E F++L++ + LLK++ S TF ++ +E LT RRF HLA++K++ PE ++
Sbjct: 39 LEEFFEALESTVALLKIRKQSCTFAAVSAPVEALTKRRFLRSHLAKIKYLFPEAVECDSF 98
Query: 171 LTFDEKTSCMKPDLHVTV--------NADAIECDGKS-KCNSKNLNLRTVFRARLMDFLK 221
D TS +K D+ + + + + G + K +++ + R F+ R+ F K
Sbjct: 99 TWKDPDTSSLKTDIRIKLLPFSPEQPASVSKSVSGMARKWSAETVARRREFQKRIAAFEK 158
Query: 222 DHPEGDEIPEETLPE 236
D DE+PE L E
Sbjct: 159 D----DEVPEAQLVE 169
>gi|357499695|ref|XP_003620136.1| hypothetical protein MTR_6g077630 [Medicago truncatula]
gi|355495151|gb|AES76354.1| hypothetical protein MTR_6g077630 [Medicago truncatula]
Length = 164
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 541 ASLPKLFNMIHFLFQSIKRSVI--TKEELIHKIISSHLQITDRREVEEQMNLMLELVPEW 598
+SL +L N+I +F S+KR+ I TKEEL+ KI+ + L + RE EEQ+ ++ + VP+W
Sbjct: 69 SSLVELVNVIDSIFDSVKRTSISMTKEELLQKIMMNCLDFVEIREAEEQIEILEKTVPDW 128
Query: 599 ISEKLSSCGDLLVCINKMTCPESIRARL 626
+ +K+ S GD + C+ +S+R RL
Sbjct: 129 LCKKVVSSGDTMYCVKNALDLDSVRLRL 156
>gi|332263308|ref|XP_003280692.1| PREDICTED: DNA replication factor Cdt1 [Nomascus leucogenys]
Length = 494
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F SLD ++ +L +C +PTF + ++ + RRF ++ Q+K + P
Sbjct: 134 LPYKYQVLAEMFRSLDTIVGMLHNRCETPTFAKVQRGVQDMIRRRFEERNVGQIKTVYPA 193
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVN-ADAIECDGKSK--CNSKNLNLRTVFRARLM 217
+ ++ V TF K + D +T+ E DG + S+ L R +F +L+
Sbjct: 194 SYRFRQERSVPTF--KDGVKRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQKLV 251
Query: 218 DFLKDH 223
+ +K+H
Sbjct: 252 EHVKEH 257
>gi|348538493|ref|XP_003456725.1| PREDICTED: DNA replication factor Cdt1-like [Oreochromis niloticus]
Length = 605
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP Y LAE F S+D V+ +L +C + TFT I ++ + +RF HL Q+K + PE
Sbjct: 244 LPYHYKVLAEMFRSMDTVVAMLYNRCETATFTKIKRGVQDMMHKRFEESHLGQIKTVFPE 303
Query: 164 VI---QIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSK---CNSKNLNLRTVFRARLM 217
Q K + F+ +S + +TV+ + + +++ S+ L R +F L+
Sbjct: 304 AYTFRQEKHIQAFN--SSIKRGSYQLTVDPIIVPENSEARPVLSASRLLERRRIFHHNLV 361
Query: 218 DFLKDH 223
+K H
Sbjct: 362 SIVKQH 367
>gi|326488619|dbj|BAJ97921.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 189
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 98 GSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQL 157
G + Y L E F+ ++ RLL++K S TF +IC I L +RRF+ GHLAQL
Sbjct: 34 GRAASSAGPSYEILCEFFNCFESSTRLLRMKGSKATFPNICASIRNLAERRFTYGHLAQL 93
Query: 158 KFILPEVI 165
K+I+PE +
Sbjct: 94 KYIMPEAM 101
>gi|410929931|ref|XP_003978352.1| PREDICTED: DNA replication factor Cdt1-like [Takifugu rubripes]
Length = 620
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 29 QNPNPTQLASK-TPEKQPSRRARNSRMALSLKEIRKAAQTNPQQP--PKDQIESAGKQIS 85
+ PN T + S TP PS +++A + KE+ Q ++P P Q ++ + +
Sbjct: 188 KKPNATSVISAPTPPADPS--TLKAQLAQA-KELVAKVQRRKERPEAPSQQQDAEARDST 244
Query: 86 ASPSVKSSVNPAGSGSPKL--PAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIEC 143
+P+ + A + P L P +Y LAE F S++ V+ +L +C +PTF I ++
Sbjct: 245 KAPAYQRYHTLAQASPPGLSLPYQYKVLAEMFRSMETVVAMLYNRCETPTFAKIKQGVQD 304
Query: 144 LTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLH-VTVNADAIECDGKSKC- 201
+T +RF H+AQ+K + PE ++ T K + +T+ + C
Sbjct: 305 MTHKRFEESHVAQIKTVFPEAYTFRQEKNIPPFTGGFKKGTYQLTMEPSFASGENLGICP 364
Query: 202 ---NSKNLNLRTVFRARLMDFLKDH 223
S+ L R F L+ +K H
Sbjct: 365 VFSASRLLERRRTFHLNLVSIVKHH 389
>gi|326490842|dbj|BAJ90088.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496865|dbj|BAJ98459.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 196
Score = 60.1 bits (144), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 108 YMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVI 165
Y L E F+ ++ RLL++K S TF +IC I L +RRF+ GHLAQLK+I+PE +
Sbjct: 87 YEILCEFFNCFESSTRLLRMKGSKATFPNICASIRNLAERRFTYGHLAQLKYIMPEAM 144
>gi|426383218|ref|XP_004058184.1| PREDICTED: DNA replication factor Cdt1 [Gorilla gorilla gorilla]
Length = 552
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 78 ESAGKQISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSI 137
E G+++ A + P G LP KY LAE F S+D ++ +L + +PTF +
Sbjct: 167 EPCGEKVPAYQRFHALAQPGLPGL-VLPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKV 225
Query: 138 CPKIECLTDRRFSLGHLAQLKFILPEVIQIKK---VLTFDEKTSCMKPDLHVTVNA-DAI 193
++ + RRF ++ Q+K + P + ++ V TF K + D +T+
Sbjct: 226 QRGVQDMMRRRFEERNVGQIKTVYPASYRFRQERSVPTF--KDGARRSDYQLTIEPLLEQ 283
Query: 194 ECDGKSK--CNSKNLNLRTVFRARLMDFLKDH 223
E DG + S+ L R +F +L++ +K+H
Sbjct: 284 EADGAAPQLTASRLLQRRQIFSQKLVEHVKEH 315
>gi|156537171|ref|XP_001603997.1| PREDICTED: DNA replication factor Cdt1-like [Nasonia vitripennis]
Length = 705
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 21/150 (14%)
Query: 24 PEMSNQNPN----PTQLASKTPEKQPSRRARNSRMALSLKEIRKAAQTNPQQPPKDQIES 79
P+ S Q+PN PT+ +P+ P+RR P++ P ++
Sbjct: 248 PQKSLQSPNKFFSPTKTIQLSPKASPARR----------------LLFEPKEAPASPVKG 291
Query: 80 AGKQISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICP 139
+ + A +S V+ G LP KY LAE F S+D + +L + + TF+ + P
Sbjct: 292 SPTKTPAYQKYQSLVDTGGKALA-LPYKYRFLAEVFRSIDTIAAMLYNRKENVTFSKLRP 350
Query: 140 KIECLTDRRFSLGHLAQLKFILPEVIQIKK 169
++ L R F+L HLAQ+K I P+ ++
Sbjct: 351 AVQELVRRDFTLEHLAQIKTIYPDAFNFQQ 380
>gi|262118476|pdb|2WVR|C Chain C, Human Cdt1:geminin Complex
gi|14495613|gb|AAH09410.1| Chromatin licensing and DNA replication factor 1 [Homo sapiens]
gi|37515268|gb|AAH00137.2| Chromatin licensing and DNA replication factor 1 [Homo sapiens]
gi|119587166|gb|EAW66762.1| DNA replication factor, isoform CRA_a [Homo sapiens]
Length = 546
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + +PTF + ++ + RRF ++ Q+K + P
Sbjct: 186 LPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEERNVGQIKTVYPA 245
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVNA-DAIECDGKSK--CNSKNLNLRTVFRARLM 217
+ ++ V TF + T + D +T+ E DG + S+ L R +F +L+
Sbjct: 246 SYRFRQERSVPTFKDGTR--RSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQKLV 303
Query: 218 DFLKDH 223
+ +K+H
Sbjct: 304 EHVKEH 309
>gi|402909298|ref|XP_003917359.1| PREDICTED: DNA replication factor Cdt1 [Papio anubis]
Length = 545
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + +PTF + ++ + RRF ++ Q+K + P+
Sbjct: 185 LPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEERNVGQIKTVYPD 244
Query: 164 VI---QIKKVLTFDEKTSCMKPDLHVTVNA-DAIECDGKSK--CNSKNLNLRTVFRARLM 217
Q + V TF K + D +T+ E DG + S+ L R +F +L+
Sbjct: 245 SYCFRQERGVPTF--KDGVKRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQKLV 302
Query: 218 DFLKDH 223
+ +K+H
Sbjct: 303 EHVKEH 308
>gi|119587167|gb|EAW66763.1| DNA replication factor, isoform CRA_b [Homo sapiens]
Length = 581
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + +PTF + ++ + RRF ++ Q+K + P
Sbjct: 186 LPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEERNVGQIKTVYPA 245
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVNA-DAIECDGKSK--CNSKNLNLRTVFRARLM 217
+ ++ V TF + T + D +T+ E DG + S+ L R +F +L+
Sbjct: 246 SYRFRQERSVPTFKDGTR--RSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQKLV 303
Query: 218 DFLKDH 223
+ +K+H
Sbjct: 304 EHVKEH 309
>gi|12007405|gb|AAG45181.1|AF321125_1 DNA replication factor [Homo sapiens]
gi|14624996|dbj|BAB61878.1| Cdt1 [Homo sapiens]
Length = 546
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + +PTF + ++ + RRF ++ Q+K + P
Sbjct: 186 LPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEERNVGQIKTVYPA 245
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVNA-DAIECDGKSK--CNSKNLNLRTVFRARLM 217
+ ++ V TF K + D +T+ E DG + S+ L R +F +L+
Sbjct: 246 SYRFRQERSVPTF--KDGARRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQKLV 303
Query: 218 DFLKDH 223
+ +K+H
Sbjct: 304 EHVKEH 309
>gi|14250474|gb|AAH08676.1| CDT1 protein [Homo sapiens]
Length = 510
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + +PTF + ++ + RRF ++ Q+K + P
Sbjct: 150 LPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEERNVGQIKTVYPA 209
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVN-ADAIECDGKSK--CNSKNLNLRTVFRARLM 217
+ ++ V TF K + D +T+ E DG + S+ L R +F +L+
Sbjct: 210 SYRFRQERSVPTF--KDGARRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQKLV 267
Query: 218 DFLKDH 223
+ +K+H
Sbjct: 268 EHVKEH 273
>gi|397468314|ref|XP_003805834.1| PREDICTED: DNA replication factor Cdt1 [Pan paniscus]
Length = 504
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + +PTF + ++ + RRF ++ Q+K + P
Sbjct: 144 LPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEERNVGQIKTVYPA 203
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVNA-DAIECDGKSK--CNSKNLNLRTVFRARLM 217
+ ++ V TF K + D +T+ E DG + S+ L R +F +L+
Sbjct: 204 SYRFRQERSVPTF--KDGARRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQKLV 261
Query: 218 DFLKDH 223
+ +K+H
Sbjct: 262 EHVKEH 267
>gi|33873963|gb|AAH08860.2| CDT1 protein [Homo sapiens]
Length = 528
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + +PTF + ++ + RRF ++ Q+K + P
Sbjct: 168 LPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEERNVGQIKTVYPA 227
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVNA-DAIECDGKSK--CNSKNLNLRTVFRARLM 217
+ ++ V TF K + D +T+ E DG + S+ L R +F +L+
Sbjct: 228 SYRFRQERSVPTF--KDGARRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQKLV 285
Query: 218 DFLKDH 223
+ +K+H
Sbjct: 286 EHVKEH 291
>gi|188497689|ref|NP_112190.2| DNA replication factor Cdt1 [Homo sapiens]
gi|308153620|sp|Q9H211.3|CDT1_HUMAN RecName: Full=DNA replication factor Cdt1; AltName: Full=Double
parked homolog; Short=DUP
Length = 546
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + +PTF + ++ + RRF ++ Q+K + P
Sbjct: 186 LPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEECNVGQIKTVYPA 245
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVNA-DAIECDGKSK--CNSKNLNLRTVFRARLM 217
+ ++ V TF + T + D +T+ E DG + S+ L R +F +L+
Sbjct: 246 SYRFRQERSVPTFKDGTR--RSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQKLV 303
Query: 218 DFLKDH 223
+ +K+H
Sbjct: 304 EHVKEH 309
>gi|432901731|ref|XP_004076919.1| PREDICTED: DNA replication factor Cdt1-like [Oryzias latipes]
Length = 511
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP + LAE F S+D V+ +L +C + TF + ++ +T RRF H+AQ++ + PE
Sbjct: 155 LPLHFRLLAEMFRSMDTVVAMLYNRCETATFAKVQQGVQDMTHRRFEQNHVAQIRTVFPE 214
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVNADAIECDGKSK---CNSKNLNLRTVFRARLM 217
+K+ + TF + K + +TV + +++ S L R VF L+
Sbjct: 215 AYALKQEKNIPTFS--SGIKKGEYQLTVEPIIVSDHSQARPVLSASLLLERRRVFHQNLI 272
Query: 218 DFLKDH 223
+K H
Sbjct: 273 SLVKQH 278
>gi|168005353|ref|XP_001755375.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693503|gb|EDQ79855.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 603
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 103 KLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILP 162
+LP KY L +D L+A I L ++ +F ++C IE T R F LAQ+K ILP
Sbjct: 71 QLPKKYALLESLYDDLEAAISFLDIRRQLCSFQAVCSTIEANTKRCFLQRRLAQIKHILP 130
Query: 163 EVIQIKKVLTFDEKTSCMKPDLHVT---VNADAIECDGKSKCNSKNLNLRT-----VFRA 214
E I ++ V ++ + K ++ ++ + A+A C++K + VFR
Sbjct: 131 EAIDLEYVHPHEQNSHNKKYEMKISLLPLPAEAEVLPSTLGCSTKKPKIEAVQRRRVFRV 190
Query: 215 RLMDFLKDHPEGDEIPEETLPE 236
RL F H E D++PE LP+
Sbjct: 191 RLSKFASIHSEEDDVPEHPLPQ 212
>gi|355710476|gb|EHH31940.1| hypothetical protein EGK_13110, partial [Macaca mulatta]
Length = 474
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + +PTF + ++ + RRF ++ Q+K + P
Sbjct: 114 LPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEERNVGQIKTVYPA 173
Query: 164 VI---QIKKVLTFDEKTSCMKPDLHVTVN-ADAIECDGKSK--CNSKNLNLRTVFRARLM 217
Q + V TF K + D +T+ E DG + S+ L R +F +L+
Sbjct: 174 SYCFRQERGVPTF--KDGVKRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQKLV 231
Query: 218 DFLKDH 223
+ +K+H
Sbjct: 232 EHVKEH 237
>gi|118599775|gb|AAH21126.1| CDT1 protein [Homo sapiens]
Length = 408
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + +PTF + ++ + RRF ++ Q+K + P
Sbjct: 48 LPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEERNVGQIKTVYPA 107
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVN-ADAIECDGKSK--CNSKNLNLRTVFRARLM 217
+ ++ V TF K + D +T+ E DG + S+ L R +F +L+
Sbjct: 108 SYRFRQERSVPTF--KDGARRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQKLV 165
Query: 218 DFLKDH 223
+ +K+H
Sbjct: 166 EHVKEH 171
>gi|355757042|gb|EHH60650.1| hypothetical protein EGM_12062, partial [Macaca fascicularis]
Length = 474
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + +PTF + ++ + RRF ++ Q+K + P
Sbjct: 114 LPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEERNVGQIKTVYPA 173
Query: 164 VI---QIKKVLTFDEKTSCMKPDLHVTVN-ADAIECDGKSK--CNSKNLNLRTVFRARLM 217
Q + V TF K + D +T+ E DG + S+ L R +F +L+
Sbjct: 174 SYCFRQERSVPTF--KDGVKRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQKLV 231
Query: 218 DFLKDH 223
+ +K+H
Sbjct: 232 EHVKEH 237
>gi|29351573|gb|AAH49205.1| CDT1 protein [Homo sapiens]
Length = 432
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + +PTF + ++ + RRF ++ Q+K + P
Sbjct: 72 LPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEERNVGQIKTVYPA 131
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVN-ADAIECDGKSK--CNSKNLNLRTVFRARLM 217
+ ++ V TF K + D +T+ E DG + S+ L R +F +L+
Sbjct: 132 SYRFRQERSVPTF--KDGARRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQKLV 189
Query: 218 DFLKDH 223
+ +K+H
Sbjct: 190 EHVKEH 195
>gi|296231790|ref|XP_002761309.1| PREDICTED: DNA replication factor Cdt1 [Callithrix jacchus]
Length = 507
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 10/127 (7%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + +PTF + ++ + R F +L Q+K + P
Sbjct: 142 LPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMIRRGFEERNLGQIKTVYPA 201
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVNADAIECDGKSKC----NSKNLNLRTVFRARL 216
++ V TF K + D +T+ +E +G + S+ L R VF +L
Sbjct: 202 SYHFRQERGVPTF--KDGVKRSDYQLTIEP-LLEQEGSGEAPKLTASRLLQRRQVFSQKL 258
Query: 217 MDFLKDH 223
++ ++ H
Sbjct: 259 VELVRQH 265
>gi|410247124|gb|JAA11529.1| chromatin licensing and DNA replication factor 1 [Pan troglodytes]
gi|410330351|gb|JAA34122.1| chromatin licensing and DNA replication factor 1 [Pan troglodytes]
Length = 552
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + +PTF + ++ + R F ++ Q+K + P
Sbjct: 192 LPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRHFEERNVGQIKTVYPA 251
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVNA-DAIECDGKSK--CNSKNLNLRTVFRARLM 217
+ ++ V TF K + D +T+ E DG + S+ L R +F +L+
Sbjct: 252 SYRFRQERSVPTF--KDGARRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQKLV 309
Query: 218 DFLKDH 223
+ +K+H
Sbjct: 310 EHVKEH 315
>gi|328702511|ref|XP_001949671.2| PREDICTED: DNA replication factor Cdt1-like [Acyrthosiphon pisum]
Length = 549
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 19/160 (11%)
Query: 73 PKDQIESAGKQISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSP 132
P+ ++ G ++ SPS K A S + LP KY L E F +L+ V ++ +
Sbjct: 228 PRKLLDEVGSLLAMSPS-KRYAALADSKALPLPLKYRILDELFKALETVSSMMFSRKEKI 286
Query: 133 TFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADA 192
TF + I+ +T + F+ HLAQ+K ++P+ + V + EK SC +L +T N +
Sbjct: 287 TFNKLKRGIQQMTRKNFTELHLAQIKTVVPDFFKFALVKSPKEK-SCF--ELVITPNYGS 343
Query: 193 IECDGKSKCNSKNLNL-------RTVFRARLMDFLKDHPE 225
+ N N+NL + F L+D LK+H E
Sbjct: 344 V--------NEDNINLIELTTQRKKTFSNALLDILKEHHE 375
>gi|157818675|ref|NP_001099662.1| DNA replication factor Cdt1 [Rattus norvegicus]
gi|149038395|gb|EDL92755.1| retroviral integration site 2 (predicted) [Rattus norvegicus]
Length = 556
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + + TF + ++ + +RF ++ Q+K + PE
Sbjct: 198 LPYKYQVLAEMFRSMDTIVSMLHNRSETVTFAKVKQGVQEMIRKRFEERNMGQIKTVYPE 257
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVN-ADAIECDGKSKCNSKN-LNLRTVFRARLMD 218
++ V TF K S + D +T+ E G ++ + L R VFR L++
Sbjct: 258 SYSFRQECNVPTF--KDSIKRSDYQLTIEPLLGQEAGGATQLTATGLLQRRQVFRQNLVE 315
Query: 219 FLKDH 223
+K+H
Sbjct: 316 RVKEH 320
>gi|109129515|ref|XP_001100344.1| PREDICTED: DNA replication factor Cdt1-like, partial [Macaca
mulatta]
Length = 383
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + +PTF + ++ + RRF ++ Q+K + P
Sbjct: 23 LPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEERNVGQIKTVYPA 82
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVN-ADAIECDGKSK--CNSKNLNLRTVFRARLM 217
++ V TF K + D +T+ E DG + S+ L R +F +L+
Sbjct: 83 SYCFRRERSVPTF--KDGVKRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQKLV 140
Query: 218 DFLKDH 223
+ +K+H
Sbjct: 141 EHVKEH 146
>gi|414887691|tpg|DAA63705.1| TPA: hypothetical protein ZEAMMB73_727913 [Zea mays]
gi|414887697|tpg|DAA63711.1| TPA: hypothetical protein ZEAMMB73_898751 [Zea mays]
Length = 619
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 147 RRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNL 206
R+ S HLAQ+K++ PE IQIK+VL EK+ CM D+ + + D +E + S ++
Sbjct: 519 RKLSYCHLAQMKYLFPEAIQIKRVL-LHEKSLCMYADMEIILVMDVVEYTSPDQ--SPSM 575
Query: 207 NLRTVFRARLMDFLKDH 223
+ F ++L+ FL H
Sbjct: 576 AICDAFYSKLLTFLDAH 592
>gi|383853162|ref|XP_003702092.1| PREDICTED: DNA replication factor Cdt1-like [Megachile rotundata]
Length = 726
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 27/172 (15%)
Query: 78 ESAGKQISASPS----VKSSVNPAGSGSPKLP--AKYMQLAECFDSLDAVIRLLKLKCSS 131
E+ G ++ SP+ + ++ A SG+P LP KY LAE F +D V +L + +
Sbjct: 300 ETTGSVVNCSPTKVPAYQQYLSLAESGTPALPLPYKYRFLAEAFRCVDTVSAILFNRKET 359
Query: 132 PTFTSICPKIECLTDRRFSLGHLAQLKFILPE--VIQIKKVLTFDEKTSCMKPDLHVTVN 189
TF + P ++ L + F+L HLAQ+K I P+ + +K TF S K D + V
Sbjct: 360 ITFKKLKPAVQELLRKNFTLEHLAQIKTIFPDAYIYTQEKYRTFG---SASKQDKYELVL 416
Query: 190 ADAI-ECDGKSKCNSKN---------------LNLRTVFRARLMDFLKDHPE 225
+ E +G++ + N LN R F L+D +KD E
Sbjct: 417 VPVVQETNGRNTPDPDNVLKTASEASMGPQVLLNRRRKFYNILLDKIKDEHE 468
>gi|332846664|ref|XP_003315291.1| PREDICTED: LOW QUALITY PROTEIN: DNA replication factor Cdt1 [Pan
troglodytes]
Length = 533
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + +PTF + ++ + R F ++ Q+K + P
Sbjct: 173 LPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRHFEERNVGQIKTVYPA 232
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVN-ADAIECDGKSK--CNSKNLNLRTVFRARLM 217
+ ++ V TF K + D +T+ E DG + S+ L R +F +L+
Sbjct: 233 SYRFRQERSVPTF--KDGARRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQKLV 290
Query: 218 DFLKDH 223
+ +K+H
Sbjct: 291 EHVKEH 296
>gi|440908777|gb|ELR58762.1| DNA replication factor Cdt1, partial [Bos grunniens mutus]
Length = 506
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 50 RNSRMALSLKEIRKAAQTNPQQP--PKDQI---ESAGKQISASPSVKSSVNPAGSGSPKL 104
R + +E++ +AQ + +P P+D+ E G+Q+ A + P G L
Sbjct: 88 RAQELGARFQELKASAQKDAGEPSAPEDEGRLEEPCGEQMPAYQRFHALAQPGLPGL-VL 146
Query: 105 PAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEV 164
P KY LAE F S+D ++ +L + + TF + ++ + +RF ++ Q+K + P
Sbjct: 147 PYKYQVLAEMFRSMDTIVGMLYNRSETVTFAKVKQGVQDMMRKRFEERNVGQIKTVYPGS 206
Query: 165 IQIKK---VLTFDEKTSCMKPDLHVTVNADAIECDGKSK---CNSKNLNLRTVFRARLMD 218
++ V TF K + D +T+ + G + S+ L R VF L+
Sbjct: 207 YHFRQERFVPTF--KDGIKRSDYQLTIEPLLDQQAGSAAPQLTASRLLQRRQVFSQNLVA 264
Query: 219 FLKDH 223
+++H
Sbjct: 265 RVREH 269
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 509 ENLIQSIREKE-RKFMEE--RDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKE 565
+ L++ IR KE +K + + R P Q R Q + LP+L ++ +F S ++ +T E
Sbjct: 380 QALLERIRAKEAQKQLAQMTRRPEQEQ---RLQRLERLPELARVLRGVFVSERKPALTME 436
Query: 566 ELIHKIISSHLQITDRREVEEQMNLMLELVPEWIS 600
+++ S+ E+E+ + L+ EL+P+W+S
Sbjct: 437 VACARMVGSYRAAMSPGEMEKHLQLLSELLPDWLS 471
>gi|345307427|ref|XP_001512188.2| PREDICTED: DNA replication factor Cdt1-like [Ornithorhynchus
anatinus]
Length = 724
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 71 QPPKDQIESAGKQISASPSVKSSVNPAGSGSP---KLPAKYMQLAECFDSLDAVIRLLKL 127
Q P++++ G+ SAS + +P LP KY LAE F S+D ++ +L
Sbjct: 381 QSPREEVNLQGEPSSASAPAYQRFHTLAQDTPPGLTLPYKYKVLAEMFRSMDTIVGMLFN 440
Query: 128 KCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILP---EVIQIKKVLTFDEKTSCMKPDL 184
+ + TF + ++ + +RF ++ Q+K + P E Q K + TF + S + D
Sbjct: 441 RAETVTFAKVKQGVQDMMRKRFEEQNVGQIKAVYPSSYEFRQEKNIPTFSD--SVKRSDY 498
Query: 185 HVTVN---ADAIECDGKSKCNSKN-LNLRTVFRARLMDFLKDH 223
+T+ A +G+ + ++ + L R F L++ +K+H
Sbjct: 499 QLTIEPVLGPAELTEGRPQLSASHLLQRRHTFGRNLVNLVKEH 541
>gi|350584786|ref|XP_003126855.3| PREDICTED: DNA replication factor Cdt1 [Sus scrofa]
Length = 506
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 15/190 (7%)
Query: 46 SRRARNSRMALSLKEIRKAAQT----NPQQPPKDQ--IESAGKQISASPSVKSSVNPAGS 99
SR R + ++E+R++AQ +P+ P ++ E G+++ A + P
Sbjct: 87 SRLQRAQELGAQVQELRESAQRKDAEDPRVPEEEGRPAEPGGEKMPAYQRFHALAQPGPP 146
Query: 100 GSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKF 159
G LP KY LAE F SLD ++ LL + + TF + ++ + +RF +L Q+K
Sbjct: 147 GL-VLPYKYQVLAEMFRSLDTIVGLLHNRSETVTFAKVKQGVQDMMRKRFEEHNLGQIKT 205
Query: 160 ILPEVIQIKK---VLTFDEKTSCMKPDLHVTVNADAIECDGKSK---CNSKNLNLRTVFR 213
+ P + ++ + TF K + D +T+ + G + S L R VF
Sbjct: 206 VYPASYRFRQERFIPTF--KDGVRRSDYQLTLEPLLDQPAGSAAPQLTASCLLQRRQVFS 263
Query: 214 ARLMDFLKDH 223
L+ +++H
Sbjct: 264 QNLVARVREH 273
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 509 ENLIQSIREKE-RKFMEE--RDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKE 565
+ L++ IR KE +K + + R P Q R Q + LP+L ++ +F + ++ +T E
Sbjct: 380 QALLERIRAKEAQKQLAQMTRQPEQEQ---RLQRLQRLPELARVLRGVFVAERKPALTME 436
Query: 566 ELIHKIISSHLQITDRREVEEQMNLMLELVPEWIS-EKLSSCGDLLVCINKMTCPESIRA 624
+++ S+ E+E+ + L+ EL+P+W+S ++ + D V ++K S+ A
Sbjct: 437 VACARMVGSYRAAMSLGEMEKHVQLLSELLPDWLSLHRIRA--DTYVKLDKAADLASVTA 494
Query: 625 RL 626
RL
Sbjct: 495 RL 496
>gi|301788962|ref|XP_002929898.1| PREDICTED: DNA replication factor Cdt1-like [Ailuropoda
melanoleuca]
Length = 762
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 13/185 (7%)
Query: 50 RNSRMALSLKEIRKAAQ-TNPQQP--PKDQIESAGKQISASPSVKSSVNPAGSGSPKL-- 104
R + +E+R +AQ + +P P+DQ + AG +P+ + A G P L
Sbjct: 347 RARELGARAQELRASAQRKDAGEPSVPEDQGQPAGPCGEKAPAYQRFHALAQPGPPSLVL 406
Query: 105 PAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEV 164
P KY LAE F S+D ++ +L + + TF + ++ + +RF ++ Q++ + P
Sbjct: 407 PYKYQVLAEMFRSMDTIVGMLYNRSETVTFAKVKQGVQDMMRKRFEERNVGQIRTVYPTS 466
Query: 165 IQIKK---VLTFDEKTSCMKPDLHVTVNADAIECDGKSK---CNSKNLNLRTVFRARLMD 218
+ ++ V TF K + D +T+ G + S+ L R VF L++
Sbjct: 467 YRFRQERNVPTF--KDGVKRSDYQLTIEPLLDREAGSTAPQLTASRLLQRRQVFSQNLVE 524
Query: 219 FLKDH 223
+++H
Sbjct: 525 RVREH 529
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 509 ENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELI 568
++L++ IR KE + + + R Q +A LP+L ++ +F S ++ +T E
Sbjct: 636 QDLLERIRCKEAQKQLAHMTRQPEQEQRLQRLARLPELARVLRSVFVSERKPALTMEAAC 695
Query: 569 HKIISSHLQITDRREVEEQMNLMLELVPEWIS---------EKLSSCGDLLVCINKMT 617
++ S+++ E+E+ + L+ EL+P+W+S KL DL + ++
Sbjct: 696 SRMAGSYVEAMSPGEMEQHVRLLSELLPDWLSLHRIRTDTYVKLDKAADLAGVVTRLA 753
>gi|345800809|ref|XP_536753.3| PREDICTED: DNA replication factor Cdt1 [Canis lupus familiaris]
Length = 622
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 73 PKDQIESAGKQISASPSVKSSVNPAGSGSPKL--PAKYMQLAECFDSLDAVIRLLKLKCS 130
PKDQ AG +P+ + A G P L P KY LAE F S+D ++ +L +
Sbjct: 237 PKDQGHPAGACGEKAPAYQRFHALAQPGPPGLVLPYKYQVLAEMFRSMDTIVGMLYNRSE 296
Query: 131 SPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKK---VLTFDEKTSCMKPDLHVT 187
+ TF + ++ + +RF ++ Q++ + P + ++ + TF K + D +T
Sbjct: 297 TVTFAKVKQGVQDMMRKRFEERNVGQIRTVYPACYRFRQERNIPTF--KDGIKRSDYQLT 354
Query: 188 VNADAIECDGKSK---CNSKNLNLRTVFRARLMDFLKDH 223
+ + G + S L R VF L++ +++H
Sbjct: 355 IEPVLDQEAGSAAPQLTASHLLQRRQVFSQNLVERVREH 393
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 55/95 (57%), Gaps = 6/95 (6%)
Query: 509 ENLIQSIREKE-RKFMEE--RDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKE 565
++L++ IR KE +K + + R+P Q R Q + LP+L ++ +F S ++ +T E
Sbjct: 496 QDLLERIRCKEAQKQLAQMTRNPEQEQ---RLQRLQRLPELARVLRSIFVSERKPALTME 552
Query: 566 ELIHKIISSHLQITDRREVEEQMNLMLELVPEWIS 600
+++ S+ + E+E+ + L+ EL+P+W+S
Sbjct: 553 VACSRMVGSYPAAMNPGEMEKHIRLLSELLPDWLS 587
>gi|291242730|ref|XP_002741259.1| PREDICTED: Cdt1 protein-like [Saccoglossus kowalevskii]
Length = 748
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY L+E F S+D ++ +L+ + + TFT + ++ + R F L +L Q+K + P
Sbjct: 390 LPYKYKILSEMFRSVDTIVGILQNRTETCTFTKLKEAVQEMIRRTFELKNLGQIKTVYPY 449
Query: 164 VI---QIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSK-----CNSKNLNLRTVFRAR 215
Q + V T+ K D +T++A + + +SK + R +F
Sbjct: 450 AYTFRQERGVPTY--KHGVKSTDYQLTIDASLDSTSNQQEQRQKLTSSKLIQRRNIFDHS 507
Query: 216 LMDFLKDHPE---GDEIPEETLPE 236
L+D +K H + IP T+PE
Sbjct: 508 LVDIVKVHHKDFLSKLIPPLTVPE 531
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 62/110 (56%), Gaps = 11/110 (10%)
Query: 494 NEDISVDGDVLDILPENLIQSIREKERKFMEE---RDPAISQAKWRRQMIASLPKLFNMI 550
N++ ++ G +P++L++ IR KE ME RDPA + + MIA LP+L ++
Sbjct: 614 NQNTAIKG-----VPQSLLERIRAKEAAKMEAALIRDPAEDK---KTDMIARLPELCRIL 665
Query: 551 HFLFQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWIS 600
F + K++ I E K++ S+ ++E+ +++M E++P+W+S
Sbjct: 666 RGFFLAEKKAAIPIESATSKLVESYKSCISVAQMEKHLDVMSEVLPQWLS 715
>gi|292616343|ref|XP_002662989.1| PREDICTED: DNA replication factor Cdt1 [Danio rerio]
Length = 629
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 15/178 (8%)
Query: 53 RMALSLKEIRKAAQTNPQQPPKDQIESAGKQISASPSVKSSVNPAGSGSPKLPAKYMQLA 112
R A + E KAA+T P P+++ + Q ++ V P + LP +Y LA
Sbjct: 226 RKAERVIEEAKAAETQPATEPQEREKLPAYQ--RYHTLAQDVPPGLT----LPYQYKLLA 279
Query: 113 ECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVI---QIKK 169
E F SL+ ++ +L + + TFT + ++ + +RF HL Q+K + P Q K
Sbjct: 280 EMFRSLETIVAMLFNRSETVTFTKVKQGVQDMMRKRFEESHLGQIKAVYPSAYTFRQEKN 339
Query: 170 VLTFDEKTSCMKPDLHVTVNADAIECDGKSK----CNSKNLNLRTVFRARLMDFLKDH 223
+++F + + +TV E + S S+ L R +F L++ +K H
Sbjct: 340 IISFS--ATAKRSSYQLTVEPVIDEGEKTSTRPVLSASRLLERRHIFHQNLVEIVKGH 395
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 65/125 (52%), Gaps = 15/125 (12%)
Query: 504 LDILPENLIQSIREKERKFMEE---RDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRS 560
L + ++L++ IR KE + + R+P Q + R M++ LP+L ++ +F + K+
Sbjct: 498 LKGVSQSLLERIRAKEAQKLHAVMTRNP---QQEERLLMMSRLPELARILRNVFVAEKKP 554
Query: 561 VITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWIS---------EKLSSCGDLLV 611
+ E +++I+S+ E+E+ + L+ EL P W++ KL+ DL +
Sbjct: 555 ALIMELACNRMIASYRSPLTSDEMEKHLRLLAELTPAWLTIHPIRKDLYLKLNKTTDLSI 614
Query: 612 CINKM 616
++K+
Sbjct: 615 VLDKL 619
>gi|297485202|ref|XP_002694809.1| PREDICTED: DNA replication factor Cdt1 [Bos taurus]
gi|296478054|tpg|DAA20169.1| TPA: chromatin licensing and DNA replication factor 1 [Bos taurus]
Length = 549
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 50 RNSRMALSLKEIRKAAQTNPQQP--PKDQI---ESAGKQISASPSVKSSVNPAGSGSPKL 104
R + +E++ +AQ + +P P+D+ E G+Q+ A + P G L
Sbjct: 131 RAQELGARFQELKASAQKDAGEPSAPEDEGRLEEPCGEQMPAYQRFHALAQPGLPGL-VL 189
Query: 105 PAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEV 164
P KY L+E F S+D ++ +L + + TF + ++ + +RF ++ Q+K + P
Sbjct: 190 PYKYQVLSEMFRSMDTIVGMLYNRSETVTFAKVKQGVQDMMRKRFEERNVGQIKTVYPGS 249
Query: 165 IQIKK---VLTFDEKTSCMKPDLHVTVNADAIECDGKSK---CNSKNLNLRTVFRARLMD 218
++ V TF K + D +T+ + G + S+ L R VF L+
Sbjct: 250 YHFRQERFVPTF--KDGIKRSDYQLTIEPLLDQQAGSAAPQLTASRLLQRRQVFSQNLVA 307
Query: 219 FLKDH 223
+++H
Sbjct: 308 RVREH 312
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 503 VLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVI 562
L + + L++ IR KE + + + + R Q + LP+L ++ +F S ++ +
Sbjct: 417 ALKGVSQALLERIRAKEAQKQLAQMTRRPEQEQRLQRLERLPELARVLRGVFVSERKPAL 476
Query: 563 TKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWIS---------EKLSSCGDLLVCI 613
T E +++ S+ E+E+ + L+ EL+P+W+S KL DL +
Sbjct: 477 TMEVACARMVGSYRAAMSPGEMEKHLQLLSELLPDWLSLHRIRTDTYVKLDKAADLAGVM 536
Query: 614 NKMT 617
++
Sbjct: 537 EQLA 540
>gi|348550280|ref|XP_003460960.1| PREDICTED: DNA replication factor Cdt1 [Cavia porcellus]
Length = 582
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + + TF + ++ + RRF ++ Q+K + P
Sbjct: 223 LPYKYQVLAEMFRSMDTIVGMLHNRSETVTFAKVKQGVQDMMRRRFEEHNVGQIKTVYPM 282
Query: 164 VI---QIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSK------CNSKNLNLRTVFRA 214
Q + V TF K S K D +T+ DG++ S+ L R VF
Sbjct: 283 SYCFRQERNVPTF--KDSVKKSDYQLTIEP---LLDGEAGGPTPQLTASRLLQRRRVFSQ 337
Query: 215 RLMDFLKDH 223
L+D +K+H
Sbjct: 338 NLVDRVKEH 346
>gi|194674947|ref|XP_597224.4| PREDICTED: DNA replication factor Cdt1 [Bos taurus]
Length = 531
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 50 RNSRMALSLKEIRKAAQTNPQQP--PKDQI---ESAGKQISASPSVKSSVNPAGSGSPKL 104
R + +E++ +AQ + +P P+D+ E G+Q+ A + P G L
Sbjct: 113 RAQELGARFQELKASAQKDAGEPSAPEDEGRLEEPCGEQMPAYQRFHALAQPGLPGL-VL 171
Query: 105 PAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEV 164
P KY L+E F S+D ++ +L + + TF + ++ + +RF ++ Q+K + P
Sbjct: 172 PYKYQVLSEMFRSMDTIVGMLYNRSETVTFAKVKQGVQDMMRKRFEERNVGQIKTVYPGS 231
Query: 165 IQIKK---VLTFDEKTSCMKPDLHVTVNADAIECDGKSK---CNSKNLNLRTVFRARLMD 218
++ V TF K + D +T+ + G + S+ L R VF L+
Sbjct: 232 YHFRQERFVPTF--KDGIKRSDYQLTIEPLLDQQAGSAAPQLTASRLLQRRQVFSQNLVA 289
Query: 219 FLKDH 223
+++H
Sbjct: 290 RVREH 294
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%)
Query: 503 VLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVI 562
L + + L++ IR KE + + + + R Q + LP+L ++ +F S ++ +
Sbjct: 399 ALKGVSQALLERIRAKEAQKQLAQMTRRPEQEQRLQRLERLPELARVLRGVFVSERKPAL 458
Query: 563 TKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWIS 600
T E +++ S+ E+E+ + L+ EL+P+W+S
Sbjct: 459 TMEVACARMVGSYRAAMSPGEMEKHLQLLSELLPDWLS 496
>gi|357608411|gb|EHJ65989.1| hypothetical protein KGM_03221 [Danaus plexippus]
Length = 574
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 45 PSRRARNSRMALS-LKEIRKAAQTNPQQPPKDQIESAGKQISASPSVKSSVNPAGSGSPK 103
PS+++ N LS K+ ++Q P P+ S K S P+ + A + +
Sbjct: 146 PSKKSLNRHEFLSPTKQDSVSSQQIPLLSPRKVFVSPIKSPSKVPAYIRHASLAAPSNLQ 205
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP Y LAE F ++ V+ LL + TF + P I+ + R F HLAQ+K+++P+
Sbjct: 206 LPHHYRFLAELFRGMETVVALLYNRNEKITFNKLKPSIQEMLKRSFCEKHLAQIKYLVPD 265
Query: 164 V--IQIKKVLTF 173
+++K+ +F
Sbjct: 266 FYNFEVQKIKSF 277
>gi|356560003|ref|XP_003548285.1| PREDICTED: CDT1-like protein b-like [Glycine max]
Length = 60
Score = 52.8 bits (125), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 576 LQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARLEESK 630
L + REVEEQ+ + +LVP+WI +KL + GD + CINK++ +S+R+RL ++
Sbjct: 4 LDFVEIREVEEQIEYLEKLVPDWICKKLVATGDTVYCINKVSDLDSVRSRLSSNE 58
>gi|426243456|ref|XP_004015571.1| PREDICTED: DNA replication factor Cdt1 [Ovis aries]
Length = 717
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 50 RNSRMALSLKEIRKAAQTNPQQP--PKDQ--IES-AGKQISASPSVKSSVNPAGSGSPKL 104
R + ++E++ +AQ + +P P+D+ +E G+Q+ A + P G L
Sbjct: 303 RAQELGARVQELKASAQKDAGEPSAPEDEGRLEGPCGEQMPAYQRFHALAQPGPPGL-VL 361
Query: 105 PAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEV 164
P KY LAE F S+D ++ +L + + TF + ++ + +RF ++ Q+K + P
Sbjct: 362 PYKYQVLAEMFRSMDTIVGMLYNRSETVTFAKVKQGVQDMMRKRFEERNVGQIKTVYPGS 421
Query: 165 IQIKK---VLTFDEKTSCMKPDLHVTVNADAIECDGKSK---CNSKNLNLRTVFRARLMD 218
++ V TF K + D +T+ + G + S+ L R VF L+
Sbjct: 422 YHFRQERFVPTF--KDGIKRSDYQLTIEPLLDQQAGSAAPQLTASRLLQRRQVFSQNLVA 479
Query: 219 FLKDH 223
+++H
Sbjct: 480 RVREH 484
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%)
Query: 536 RRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELV 595
R Q + LP+L ++ +F S ++ +T E +++ S+ E+E+ + L+ EL+
Sbjct: 618 RLQRLERLPELARVLRGVFVSERKPALTMEVACARMVGSYRAAMSPGEMEKHLQLLSELL 677
Query: 596 PEWIS 600
P+W+S
Sbjct: 678 PDWLS 682
>gi|110749350|ref|XP_393349.3| PREDICTED: DNA replication factor Cdt1 [Apis mellifera]
Length = 724
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 87 SPSVKSSVNPAGSGSPKLP--AKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECL 144
+P+ + ++ A SG+P LP Y LAE F LD + +L + + TF + P I+ L
Sbjct: 311 TPAYQQYLSLAESGTPALPLPYHYRFLAEAFRCLDTISAMLFNRKETITFKKLKPAIQEL 370
Query: 145 TDRRFSLGHLAQLKFILPE 163
+ F+L HLAQ+K I P+
Sbjct: 371 LRKNFTLEHLAQIKTIYPD 389
>gi|380019335|ref|XP_003693565.1| PREDICTED: DNA replication factor Cdt1-like [Apis florea]
Length = 723
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 87 SPSVKSSVNPAGSGSPKLP--AKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECL 144
+P+ + ++ A SG+P LP Y LAE F LD + +L + + TF + P I+ L
Sbjct: 310 TPAYQQYLSLAESGTPALPLPYHYRFLAEAFRCLDTISAMLFNRKETITFKKLKPAIQEL 369
Query: 145 TDRRFSLGHLAQLKFILPE 163
+ F+L HLAQ+K I P+
Sbjct: 370 LRKNFTLEHLAQIKTIYPD 388
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 13/185 (7%)
Query: 423 EQSTPAKLVSTPARLMI--GT---PALHQPKRCYMTPENVSA--SSPNKLTRRPPHSRTL 475
E+ T AK V A+ + GT AL + MT + +S+ + N T+ + R +
Sbjct: 509 EKITTAKDVLDKAKSLFNCGTRMEKALQRLAEAKMTSKTLSSEKNEVNNSTQTEENMRKI 568
Query: 476 KSLKFDTPVKNATVEHKLNEDISVDGDVLDILPENLIQSIREKERKFMEERDPAISQAKW 535
DTP TV+ N +S L +P+ L++ +R K+ E A+
Sbjct: 569 NITVVDTPPITPTVQ---NNHLST---ALKGIPKALLEKVRAKQAAKALEAMTRTPNAEK 622
Query: 536 RRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELV 595
M + LP+L ++ +F + K+ ++T E +I K+ +S E+EE + L+ +L+
Sbjct: 623 EAVMYSRLPELVKILRNIFVAEKKGILTLEFVITKLENSFRAKLTPAELEEHVRLLCKLL 682
Query: 596 PEWIS 600
P W S
Sbjct: 683 PTWTS 687
>gi|433687430|gb|AGB51151.1| CDT1 [Bombyx mori]
Length = 597
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 99 SGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLK 158
S S LP KY LAE F ++ V+ LL + TFT + P ++ + R F HLAQ+K
Sbjct: 222 STSLPLPHKYRFLAELFRGMETVVALLYNRNEKITFTKLKPSVQEMLKRNFGEKHLAQIK 281
Query: 159 FILPEV--IQIKKVLTFDEKTSCMKPDLHVTVN 189
++P+ +++K+ F + +L VT N
Sbjct: 282 HLVPDFYNFEVQKIKNFSTSSHKDAYELVVTPN 314
>gi|194208899|ref|XP_001488093.2| PREDICTED: DNA replication factor Cdt1 [Equus caballus]
Length = 464
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 47 RRARNSRMALSLKEIRKAAQ-TNPQQPPKDQIES--AGKQISASPSVKSSVNPAGSGSPK 103
RRAR + ++E+R +AQ + ++P + E G +P+ + A G P
Sbjct: 48 RRARE--LGTRVQELRTSAQRKDAEEPSAPEAEGPPVGPCGEKAPAYQRFHALAQPGPPG 105
Query: 104 L--PAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFIL 161
L P KY LAE F S+D ++ +L + + TF + ++ + +RF ++ Q+K +
Sbjct: 106 LVLPYKYQVLAEMFRSMDTIVGMLYNRSETVTFAKVKQGVQDMMRKRFEERNVGQIKTVY 165
Query: 162 PEVIQIKK---VLTFDEKTSCMKPDLHVTVNADAIECDGKSK---CNSKNLNLRTVFRAR 215
P + ++ V TF + K D +T+ + G + S+ L R VF
Sbjct: 166 PASYRFRQERDVPTF--RDGVKKSDYQLTIEPLLDQEAGGTAPQLTASRLLQRRQVFSQN 223
Query: 216 LMDFLKDH 223
L++ +++H
Sbjct: 224 LVERVREH 231
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 509 ENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELI 568
+ L++ IR KE + + + + R Q + LP+L ++ +F S ++ +T E
Sbjct: 338 QALLERIRAKEAQKQLAQMTRCPEQEQRLQRLERLPELARLLRSVFVSERKPALTMEVAC 397
Query: 569 HKIISSHLQITDRREVEEQMNLMLELVPEWIS---------EKLSSCGDLLVCINKMT 617
+++ S+ E+E + L+ EL+P+W+S KL DL I ++
Sbjct: 398 ARMVGSYRAAMSPGEMETHVRLLSELLPDWLSLHCIRTDTYVKLDKAADLASIIAQLA 455
>gi|195488583|ref|XP_002092376.1| dup [Drosophila yakuba]
gi|194178477|gb|EDW92088.1| dup [Drosophila yakuba]
Length = 743
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%)
Query: 83 QISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIE 142
++ A S V + +G LP KY L + F LD+V+ + + + TF + P ++
Sbjct: 297 EVPAYKRYASLVETSRAGQLPLPYKYRHLLDVFKGLDSVVAMFHNRKETITFKKLKPAVQ 356
Query: 143 CLTDRRFSLGHLAQLKFILPEVI 165
+ + F+ HLAQ+K I PE
Sbjct: 357 RMLRKNFTESHLAQIKHIYPEAF 379
>gi|382546457|ref|NP_001244267.1| DNA replication factor Cdt1 [Bombyx mori]
gi|380503810|dbj|BAL72669.1| Cdc10 dependent transcript 1 [Bombyx mori]
Length = 588
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 99 SGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLK 158
S S LP KY LAE F ++ V+ LL + TFT + P ++ + R F HLAQ+K
Sbjct: 213 STSLPLPHKYRFLAELFRGMETVVALLYNRNEKITFTKLKPSVQEMLKRNFGEKHLAQIK 272
Query: 159 FILPEV--IQIKKVLTFDEKTSCMKPDLHVTVN 189
++P+ +++K+ F + +L VT N
Sbjct: 273 HLVPDFYNFEVQKIKNFSTSSHKDAYELVVTPN 305
>gi|189521747|ref|XP_695164.3| PREDICTED: DNA replication factor Cdt1 isoform 2 [Danio rerio]
Length = 678
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 16/178 (8%)
Query: 53 RMALSLKEIRKAAQTNPQQPPKDQIESAGKQISASPSVKSSVNPAGSGSPKLPAKYMQLA 112
R A + E KAA+T P P+++ + Q ++ V P + LP +Y LA
Sbjct: 276 RKAERVIEEAKAAETQPATEPQEREKLPAYQ--RYHTLAQDVPPGLT----LPYQYKLLA 329
Query: 113 ECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVI---QIKK 169
E F SL+ ++ +L + + TFT + ++ + +RF HL Q+K + P Q K
Sbjct: 330 EMFRSLETIVAMLFNRSETVTFTKVKQGVQDMMRKRFEESHLGQIKAVYPSAYTFRQEKN 389
Query: 170 VLTFDEKTSCMKPDLHVTVNADAIECDGKSK----CNSKNLNLRTVFRARLMDFLKDH 223
+++F + + +TV I+ + K S+ L R +F L++ +K H
Sbjct: 390 IISFS--ATAKRSSYQLTVEP-VIDEEFKGVRPVLSASRLLERRHIFHQNLVEIVKGH 444
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 65/126 (51%), Gaps = 15/126 (11%)
Query: 503 VLDILPENLIQSIREKERKFMEE---RDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKR 559
L + ++L++ IR KE + + R+P Q + R M++ LP+L ++ +F + K+
Sbjct: 546 ALKGVSQSLLERIRAKEAQKLHAVMTRNP---QQEERLLMMSRLPELARILRNVFVAEKK 602
Query: 560 SVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWIS---------EKLSSCGDLL 610
+ E +++I+S+ E+E+ + L+ EL P W++ KL+ DL
Sbjct: 603 PALIMELACNRMIASYRSPLTSDEMEKHLRLLAELTPAWLTIHPIRKDLYLKLNKTTDLS 662
Query: 611 VCINKM 616
+ ++K+
Sbjct: 663 IVLDKL 668
>gi|403261053|ref|XP_003922950.1| PREDICTED: DNA replication factor Cdt1 [Saimiri boliviensis
boliviensis]
Length = 650
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + +PTF + ++ + R F ++ Q+K + P
Sbjct: 285 LPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMIRRCFEERNVGQIKTVYPA 344
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVNADAIECDGKSK---CNSKNLNLRTVFRARLM 217
++ V TF K D +T+ + G + S+ L R VF +L+
Sbjct: 345 SYHFRQERGVPTF--KDGVKSSDYQLTIEPLLEQESGGAAPKLTASRLLQRRQVFSQKLV 402
Query: 218 DFLKDH 223
+ +K H
Sbjct: 403 ELVKQH 408
>gi|194882837|ref|XP_001975516.1| GG22355 [Drosophila erecta]
gi|190658703|gb|EDV55916.1| GG22355 [Drosophila erecta]
Length = 742
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%)
Query: 83 QISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIE 142
++ A S V + +G LP KY L + F LD+V+ + + + TF + P ++
Sbjct: 296 EVPAYKRYASLVESSRAGQLPLPYKYRHLLDVFKGLDSVVAMFHNRKETITFKKLKPAVQ 355
Query: 143 CLTDRRFSLGHLAQLKFILPEVI 165
+ + F+ HLAQ+K I PE
Sbjct: 356 RMLRKNFTETHLAQIKHIYPEAF 378
>gi|344292780|ref|XP_003418103.1| PREDICTED: DNA replication factor Cdt1 [Loxodonta africana]
Length = 548
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 71 QPPKDQIESAGKQISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCS 130
+P + +E G+++ A P G LP KY LAE F S+D V+ +L +
Sbjct: 161 EPERGPVEPCGEKVPAYQRFHVLAQPGIPGL-ALPYKYQMLAEMFRSMDTVVGMLYNRAE 219
Query: 131 SPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKK---VLTFDEKTSCMKPDLHVT 187
+ TF + ++ + RRF ++ Q+K + P + ++ + TF K + D +T
Sbjct: 220 AVTFAKVKQGVQDMMRRRFEERNVGQIKTVYPASYRFRQERNIPTF--KDGIKRSDYQLT 277
Query: 188 VNA--DAIECDGKSK--CNSKNLNLRTVFRARLMDFLKDH 223
+ D E G + S+ L R +F L+ +K+H
Sbjct: 278 IEPLLDQ-EASGVAPQLTASRLLQRRHIFSQNLVARVKEH 316
>gi|195334605|ref|XP_002033968.1| GM20140 [Drosophila sechellia]
gi|194125938|gb|EDW47981.1| GM20140 [Drosophila sechellia]
Length = 744
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%)
Query: 83 QISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIE 142
++ A S V + +G LP KY L + F LD+V+ + + + TF + P ++
Sbjct: 297 EVPAYKRYASLVESSRAGQLPLPYKYRHLLDVFKGLDSVVAMFHNRKETITFKKLKPAVQ 356
Query: 143 CLTDRRFSLGHLAQLKFILPEVI 165
+ + F+ HLAQ+K I PE
Sbjct: 357 RMLRKNFTETHLAQIKHIYPEAF 379
>gi|195583628|ref|XP_002081619.1| GD25618 [Drosophila simulans]
gi|194193628|gb|EDX07204.1| GD25618 [Drosophila simulans]
Length = 737
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%)
Query: 83 QISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIE 142
++ A S V + +G LP KY L + F LD+V+ + + + TF + P ++
Sbjct: 297 EVPAYKRYASLVESSRAGQLPLPYKYRHLLDVFKGLDSVVAMFHNRKETITFKKLKPAVQ 356
Query: 143 CLTDRRFSLGHLAQLKFILPEVI 165
+ + F+ HLAQ+K I PE
Sbjct: 357 RMLRKNFTETHLAQIKHIYPEAF 379
>gi|350417864|ref|XP_003491617.1| PREDICTED: DNA replication factor Cdt1-like [Bombus impatiens]
Length = 712
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 87 SPSVKSSVNPAGSGSPKLPAKYMQ--LAECFDSLDAVIRLLKLKCSSPTFTSICPKIECL 144
+P+ + ++ A SG+P LP Y LAE F +D V +L + + TF + P ++ L
Sbjct: 300 APAYQQYLSIAESGTPGLPLPYHYRFLAEAFRCVDTVSAMLFNRKETITFKKLKPAVQEL 359
Query: 145 TDRRFSLGHLAQLKFILPE 163
+ F+L HLAQ+K I P+
Sbjct: 360 LRKNFTLEHLAQMKTIFPD 378
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 481 DTPVKNATVEHKLNEDISVDGDVLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMI 540
DTP TV L+ ++ G +P+ L++ +R K+ E A+ M
Sbjct: 562 DTPPATPTVNKNLHLTSALKG-----IPKALLEKVRAKQAAKALEAMTRPPNAEKEAIMY 616
Query: 541 ASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWIS 600
+ LP+L ++ +F + K+ V+T E +I K+ +S E+E+ + L+ +L+P W S
Sbjct: 617 SRLPELVKVLRNIFVAEKKGVLTLEFVITKLENSFRAKLSPAELEDHLRLLCKLLPTWSS 676
>gi|17864542|ref|NP_524878.1| double parked [Drosophila melanogaster]
gi|9799617|gb|AAF99080.1|AF279146_1 replication protein double parked [Drosophila melanogaster]
gi|21428528|gb|AAM49924.1| LD35784p [Drosophila melanogaster]
gi|21627160|gb|AAF58141.2| double parked [Drosophila melanogaster]
Length = 743
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%)
Query: 83 QISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIE 142
++ A S V + +G LP KY L + F LD+V+ + + + TF + P ++
Sbjct: 297 EVPAYKRYASLVESSRAGQLPLPYKYRHLLDVFKGLDSVVAMFHNRKETITFKKLKPAVQ 356
Query: 143 CLTDRRFSLGHLAQLKFILPEVIQIKKVLT 172
+ + F+ HLAQ+K I P+ +V T
Sbjct: 357 RMLRKNFTETHLAQIKHIYPDAFIFSQVKT 386
>gi|194754972|ref|XP_001959766.1| GF11870 [Drosophila ananassae]
gi|190621064|gb|EDV36588.1| GF11870 [Drosophila ananassae]
Length = 735
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 83 QISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIE 142
++ A S V + +G LP KY L E F LD+V+ + + TF + P ++
Sbjct: 296 EVPAYKRYASLVETSRAGQLPLPYKYRHLLEVFKGLDSVVAMFHNRKECITFKKLKPAVQ 355
Query: 143 CLTDRRFSLGHLAQLKFILPEVI 165
+ + F+ HLAQ+K I PE
Sbjct: 356 RMLRKNFTETHLAQIKHIYPEAF 378
>gi|328704360|ref|XP_001948429.2| PREDICTED: DNA replication factor Cdt1-like [Acyrthosiphon pisum]
Length = 593
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 9/155 (5%)
Query: 73 PKDQIESAGKQISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSP 132
P + ++ G ++ SPS K A S + LP KY L E F +++ V ++ +
Sbjct: 223 PSNLLDEVGSLMAFSPS-KRYAALADSKTLPLPLKYRILDELFKAMETVSSMMFTRKEKI 281
Query: 133 TFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADA 192
TF + ++ +T + F+ HLAQ+K ++P++ + V + EK S +L + N +
Sbjct: 282 TFNKLKRSVQHMTRKNFTEFHLAQIKTVVPDLFKFALVKSPKEKYS---QELVIVPNYGS 338
Query: 193 IECDGKSKCNSKNLNLR--TVFRARLMDFLKDHPE 225
+ D + L++R +F L+D +K+H E
Sbjct: 339 KDEDN---IDLIELSIRRKKIFYNALLDIMKEHHE 370
>gi|351712931|gb|EHB15850.1| DNA replication factor Cdt1 [Heterocephalus glaber]
Length = 530
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + + TF + ++ + +RF ++ Q+K + P
Sbjct: 237 LPYKYQVLAEMFRSMDTIVGMLHNRSETATFAKVKGGVQDMMRKRFEERNVGQIKTVYPM 296
Query: 164 VI---QIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSK---CNSKNLNLRTVFRARLM 217
Q + V TF K S K D +T+ + G + S+ L R VF L+
Sbjct: 297 SYCFRQERNVPTF--KDSVKKSDYQLTIEPLLGQEPGGAVPQLTASRLLQRRQVFSQNLV 354
Query: 218 DFLKDH 223
+ +K+H
Sbjct: 355 NRVKEH 360
>gi|301608266|ref|XP_002933700.1| PREDICTED: DNA replication factor Cdt1 [Xenopus (Silurana)
tropicalis]
Length = 617
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 71 QPPKDQIESAGKQISASPSVKSSVNPAGSGSPKL--PAKYMQLAECFDSLDAVIRLLKLK 128
QPP + E A P+ + N A +P L P KY LAE F S+D ++ +L +
Sbjct: 230 QPPAQESEKA-------PAYQRFHNLAQDTAPGLSLPYKYKVLAEMFRSMDTIVGMLFNR 282
Query: 129 CSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVI---QIKKVLTFDEKTSCMKPDLH 185
+ TF+ + ++ + ++F ++ Q+K + P Q K + TF K K D
Sbjct: 283 SETITFSKVKQGVQDMMRKQFEQRNVGQIKTVYPTAYKYRQEKNIPTF--KDGVKKTDYQ 340
Query: 186 VTVNADAIECD---GKSKCNSKN-LNLRTVFRARLMDFLKDH 223
+T++ E D G+ ++ + L R +F L +K H
Sbjct: 341 LTIDPLIDEGDKLNGRPHLSASSLLQRRQLFHRSLTSIVKQH 382
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 485 KNATVEHKLNEDISVDGDVLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLP 544
KN + E + + + L + ++L++ IR KE + ++ Q + R M++ LP
Sbjct: 467 KNVSSEETKSAATASTSNALKGVSQSLLERIRAKEAQKLQAMMTRRPQQEERLLMMSRLP 526
Query: 545 KLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWIS---- 600
+L ++ +F + K+ +T E +++ISS+ E+E+ + L+ E++P+W+S
Sbjct: 527 ELARILRNVFVAEKKPALTLEVTCNRVISSYRSSMSPGEMEKHLALLSEILPDWLSIHPI 586
Query: 601 -----EKLSSCGDLLVCINKM 616
KL+ DL + I ++
Sbjct: 587 RKDTYYKLNKSMDLNLIIERL 607
>gi|31982546|ref|NP_080290.3| DNA replication factor Cdt1 [Mus musculus]
gi|56404629|sp|Q8R4E9.1|CDT1_MOUSE RecName: Full=DNA replication factor Cdt1; AltName: Full=Double
parked homolog; Short=DUP; AltName: Full=Retroviral
insertion site 2 protein
gi|18958525|gb|AAL82630.1| CDT1 protein [Mus musculus]
gi|24257160|dbj|BAC22085.1| Cdt1 homolog [Mus musculus]
gi|26390199|dbj|BAC25859.1| unnamed protein product [Mus musculus]
gi|29127001|gb|AAH48076.1| Chromatin licensing and DNA replication factor 1 [Mus musculus]
gi|148679743|gb|EDL11690.1| chromatin licensing and DNA replication factor 1, isoform CRA_b
[Mus musculus]
Length = 557
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 13/186 (6%)
Query: 47 RRARNSRMALSLKEIRKAAQTNPQQP--PKDQIESAGKQISASPSVKSSVNPAGSGSPKL 104
RRAR ++ + +R Q N +P P ++ + + +P+ + A G P L
Sbjct: 140 RRAR--KLGAQARALRARVQENAVEPSTPDAKVPTEQPCVEKAPAYQRFHALAQPGLPGL 197
Query: 105 --PAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILP 162
P KY L E F S+D ++ +L + + TF + ++ + +RF ++ Q+K + P
Sbjct: 198 VLPYKYQVLVEMFRSMDTIVSMLHNRSETVTFAKVKQGVQEMMRKRFEERNVGQIKTVYP 257
Query: 163 EVIQIKK---VLTFDEKTSCMKPDLHVTVN-ADAIECDGKSKCNSK-NLNLRTVFRARLM 217
+ ++ V TF K S + D +T+ E G ++ + L R VFR L+
Sbjct: 258 TSYRFRQECNVPTF--KDSIKRSDYQLTIEPLLGQEAGGATQLTATCLLQRRQVFRQNLV 315
Query: 218 DFLKDH 223
+ +K+
Sbjct: 316 ERVKEQ 321
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%)
Query: 509 ENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELI 568
+ L++ IR KE + R + + R Q + LP+L ++ +F S ++ +T E +
Sbjct: 432 QALLERIRAKEVQKQLARMTRCPEQELRLQRLERLPELARVLRNVFVSERKPALTMEVVC 491
Query: 569 HKIISSHLQITDRREVEEQMNLMLELVPEWIS 600
+++ S E+E+ + L+ EL+P+W+S
Sbjct: 492 ARMVDSCQTALSPGEMEKHLVLLAELLPDWLS 523
>gi|26339832|dbj|BAC33579.1| unnamed protein product [Mus musculus]
Length = 557
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 13/186 (6%)
Query: 47 RRARNSRMALSLKEIRKAAQTNPQQP--PKDQIESAGKQISASPSVKSSVNPAGSGSPKL 104
RRAR ++ + +R Q N +P P ++ + + +P+ + A G P L
Sbjct: 140 RRAR--KLGAQARALRARVQENAVEPSTPDAKVPTEQPCVEKAPAYQRFHALAQPGLPGL 197
Query: 105 --PAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILP 162
P KY L E F S+D ++ +L + + TF + ++ + +RF ++ Q+K + P
Sbjct: 198 VLPYKYQVLVEMFRSMDTIVSMLHNRSETVTFAKVKQGVQEMMRKRFEERNVGQIKTVYP 257
Query: 163 EVIQIKK---VLTFDEKTSCMKPDLHVTVN-ADAIECDGKSKCNSK-NLNLRTVFRARLM 217
+ ++ V TF K S + D +T+ E G ++ + L R VFR L+
Sbjct: 258 TSYRFRQECNVPTF--KDSIKRSDYQLTIEPLLGQEAGGATQLTATCLLQRRQVFRQNLV 315
Query: 218 DFLKDH 223
+ +K+
Sbjct: 316 ERVKEQ 321
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%)
Query: 509 ENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELI 568
+ L++ IR KE + R + + R Q + LP+L ++ +F S ++ +T E +
Sbjct: 432 QALLERIRAKEVQKQLARMTRCPEQELRLQRLERLPELARVLRNVFVSERKPALTMEVVC 491
Query: 569 HKIISSHLQITDRREVEEQMNLMLELVPEWIS 600
+++ S E+E+ + L+ EL+P+W+S
Sbjct: 492 ARMVDSCQTALSPGEMEKHLVLLAELLPDWLS 523
>gi|19423254|gb|AAL88446.1|AF477990_1 CDT1 protein [Mus musculus]
Length = 557
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 13/186 (6%)
Query: 47 RRARNSRMALSLKEIRKAAQTNPQQP--PKDQIESAGKQISASPSVKSSVNPAGSGSPKL 104
RRAR ++ + +R Q N +P P ++ + + +P+ + A G P L
Sbjct: 140 RRAR--KLGAQARALRARVQENAVEPSTPDAKVPTEQPCVEKAPAYQRFHALAQPGLPGL 197
Query: 105 --PAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILP 162
P KY L E F S+D ++ +L + + TF + ++ + +RF ++ Q+K + P
Sbjct: 198 VLPYKYQVLVEMFHSMDTIVSMLHNRSETVTFAKVKQGVQEMMRKRFEERNVGQIKTVYP 257
Query: 163 EVIQIKK---VLTFDEKTSCMKPDLHVTVN-ADAIECDGKSKCNSK-NLNLRTVFRARLM 217
+ ++ V TF K S + D +T+ E G ++ + L R VFR L+
Sbjct: 258 MSYRFRQECNVPTF--KDSIKRSDYQLTIEPLLGQEAGGATQLTATCLLQRRQVFRQNLV 315
Query: 218 DFLKDH 223
+ +K+
Sbjct: 316 ERVKEQ 321
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%)
Query: 509 ENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELI 568
+ L++ IR KE + R + + R Q + LP+L ++ +F S ++ +T E +
Sbjct: 432 QALLERIRAKEVQKQLARMTRCPEQELRLQRLERLPELARVLRNVFVSERKPALTMEVVC 491
Query: 569 HKIISSHLQITDRREVEEQMNLMLELVPEWIS 600
+++ S E+E+ + L+ EL+P+W+S
Sbjct: 492 ARMVDSCQTALSPGEMEKHLVLLAELLPDWLS 523
>gi|26350183|dbj|BAC38731.1| unnamed protein product [Mus musculus]
Length = 548
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 13/186 (6%)
Query: 47 RRARNSRMALSLKEIRKAAQTNPQQP--PKDQIESAGKQISASPSVKSSVNPAGSGSPKL 104
RRAR ++ + +R Q N +P P ++ + + +P+ + A G P L
Sbjct: 131 RRAR--KLGAQARALRARVQENAVEPSTPDAKVPTEQPCVEKAPAYQRFHALAQPGLPGL 188
Query: 105 --PAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILP 162
P KY L E F S+D ++ +L + + TF + ++ + +RF ++ Q+K + P
Sbjct: 189 VLPYKYQVLVEMFRSMDTIVSMLHNRSETVTFAKVKQGVQEMMRKRFEERNVGQIKTVYP 248
Query: 163 EVIQIKK---VLTFDEKTSCMKPDLHVTVN-ADAIECDGKSKCNSK-NLNLRTVFRARLM 217
+ ++ V TF K S + D +T+ E G ++ + L R VFR L+
Sbjct: 249 TSYRFRQECNVPTF--KDSIKRSDYQLTIEPLLGQEAGGATQLTATCLLQRRQVFRQNLV 306
Query: 218 DFLKDH 223
+ +K+
Sbjct: 307 ERVKEQ 312
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%)
Query: 509 ENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELI 568
+ L++ IR KE + R + + R Q + LP+L ++ +F S ++ +T E +
Sbjct: 423 QALLERIRAKEVQKQLARMTRCPEQELRLQRLERLPELARVLRNVFVSERKPALTMEVVC 482
Query: 569 HKIISSHLQITDRREVEEQMNLMLELVPEWIS 600
+++ S E+E+ + L+ EL+P+W+S
Sbjct: 483 ARMVDSCQTALSPGEMEKHLVLLAELLPDWLS 514
>gi|49114884|gb|AAH72771.1| Cdt1 protein [Xenopus laevis]
Length = 617
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 11/158 (6%)
Query: 75 DQIESAGKQISASPSVKSSVNPAGSGSPKL--PAKYMQLAECFDSLDAVIRLLKLKCSSP 132
D E ++ +P+ + N A +P L P KY LAE F S+D ++ +L + +
Sbjct: 227 DLTEQPAQESEKAPAYQRFHNLAQDAAPGLTLPYKYKVLAEMFRSMDTIVGMLFNRSETI 286
Query: 133 TFTSICPKIECLTDRRFSLGHLAQLKFILPEVI---QIKKVLTFDEKTSCMKPDLHVTVN 189
TF+ + ++ + ++F ++ Q+K + P Q K + TF K K D +T+
Sbjct: 287 TFSKVKQGVQDMMRKQFEQRNVGQIKTVYPNAYKYRQEKNIPTF--KDGVKKTDYQLTIE 344
Query: 190 ADAIECD---GKSKCN-SKNLNLRTVFRARLMDFLKDH 223
E D G+ + S+ L + +F L +K H
Sbjct: 345 PLVAEGDMLSGRPHLSASRLLERKQLFHRSLTSIVKQH 382
>gi|410984171|ref|XP_003998404.1| PREDICTED: DNA replication factor Cdt1 [Felis catus]
Length = 515
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 13/185 (7%)
Query: 50 RNSRMALSLKEIRKAAQTNPQQPP---KDQIESAGKQISASPSVKSSVNPAGSGSPKL-- 104
R + +E++ +AQ P +DQ + AG +P+ + A G P L
Sbjct: 100 RARELGARAQELKASAQRKDAGEPCVLEDQGQPAGPCGQKAPAYQRFHALAQPGPPGLVL 159
Query: 105 PAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEV 164
P KY LAE F S+D ++ +L + + TF + ++ + +RF ++ Q++ + P
Sbjct: 160 PYKYQVLAEMFRSMDTIVGMLYNRSETATFAKVKQGVQDMMRKRFEERNVGQIRTVYPAS 219
Query: 165 IQIKK---VLTFDEKTSCMKPDLHVTVNADAIECDGKSK---CNSKNLNLRTVFRARLMD 218
+ ++ V TF K + D +T+ + G + S L R VF L++
Sbjct: 220 YRFRQERNVPTF--KDGVKRSDYQLTIEPLLDQEAGGTAPQLTASHLLRRRQVFGQNLVE 277
Query: 219 FLKDH 223
+++H
Sbjct: 278 RVREH 282
>gi|357499897|ref|XP_003620237.1| hypothetical protein MTR_6g078990 [Medicago truncatula]
gi|355495252|gb|AES76455.1| hypothetical protein MTR_6g078990 [Medicago truncatula]
Length = 285
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 180 MKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDFLKDHPEGDEIPEETLPEPFN 239
MKPDL +T+ D +E K S +L L F RL++F HPEG +IPE TL E F+
Sbjct: 1 MKPDLKITLVFDVVEDYSKQ---SDDLALIRYFNYRLINFFNLHPEGTDIPEATLSELFS 57
Query: 240 R 240
+
Sbjct: 58 Q 58
>gi|157119085|ref|XP_001659329.1| DNA replication factor Cdt1 [Aedes aegypti]
gi|108875480|gb|EAT39705.1| AAEL008519-PA [Aedes aegypti]
Length = 713
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 97 AGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQ 156
+G+ S +LP KY LAE F +D V + + TF + P ++ + + HLAQ
Sbjct: 323 SGTPSLQLPYKYRSLAELFKCIDTVCAMFYNRKEQITFKKLKPAVQRMARKNLYETHLAQ 382
Query: 157 LKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNL 208
+K + P+ + + LT S K + + + +E +KC+ ++ N+
Sbjct: 383 IKTLFPDAFEFSQELT-KNYGSATKNEYYQLIIKPNVEEKEPAKCDDEDANV 433
>gi|301093046|ref|XP_002997372.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110770|gb|EEY68822.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 328
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 63/105 (60%), Gaps = 7/105 (6%)
Query: 507 LPENLIQSIREKERKFMEERDPAISQAK-WRRQMIASLPKLFNMIHFLFQSIKRSVITKE 565
LPE LI +R++E + +D A + AK +++M+A+LP+L + + L K+S+ K
Sbjct: 207 LPEWLINKVRQQE---VSRKDVAENSAKALKKRMLATLPQLSDQLQSLVIVTKKSIFPKA 263
Query: 566 ELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLL 610
E++ ++ ++ + ++EEQ+ L+ LVPEW++ L S + +
Sbjct: 264 EVVRRL---AVRAPIKGKIEEQLYLLESLVPEWLTVVLDSGKEYI 305
>gi|355677560|gb|AER96022.1| chromatin licensing and DNA replication factor 1 [Mustela putorius
furo]
Length = 208
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 50 RNSRMALSLKEIRKAAQTNPQQPP---KDQIESAGKQISASPSVKSSVNPAGSGSPKL-- 104
R + +E+R +AQ P +DQ AG +P+ + A G P L
Sbjct: 16 RARELGARAQELRASAQRKDAGEPSVLEDQGHPAGPCGEKAPAYQRFHALAQPGPPGLVL 75
Query: 105 PAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEV 164
P KY LAE F S+DA++ LL + + TF + ++ + +RF ++ Q++ + P
Sbjct: 76 PYKYQVLAEMFRSMDAIVGLLYNRSETVTFAKVKQGVQDMMRKRFEERNVGQIRTVYPTS 135
Query: 165 IQIKK---VLTFDEKTSCMKPDLHVTV 188
+ ++ + TF K + D +T+
Sbjct: 136 YRFRQERNIPTF--KDGIKRSDYQLTI 160
>gi|350539779|ref|NP_001233647.1| DNA replication factor Cdt1 [Cricetulus griseus]
gi|121489687|emb|CAK02758.1| cdc dependent transcript 1 [Cricetulus griseus]
Length = 553
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + + TF + ++ + +RF ++ Q+K + P
Sbjct: 194 LPYKYQVLAEMFRSMDTIVGMLHNRSETVTFAKVKQGVQDMMRKRFEERNVGQIKTVYPT 253
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVN--ADAIECDGKSKCNSK-NLNLRTVFRARLM 217
++ V TF K S + D +T+ D G ++ + L R VFR L+
Sbjct: 254 SYCFRQECNVPTF--KDSIKRSDYQLTIEPLLDQETSGGATQLTATCLLQRRQVFRRNLV 311
Query: 218 DFLKDH 223
+ +K+H
Sbjct: 312 ERVKEH 317
>gi|344237972|gb|EGV94075.1| DNA replication factor Cdt1 [Cricetulus griseus]
Length = 553
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + + TF + ++ + +RF ++ Q+K + P
Sbjct: 194 LPYKYQVLAEMFRSMDTIVGMLHNRSETVTFAKVKQGVQDMMRKRFEERNVGQIKTVYPT 253
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVN--ADAIECDGKSKCNSK-NLNLRTVFRARLM 217
++ V TF K S + D +T+ D G ++ + L R VFR L+
Sbjct: 254 SYCFRQECNVPTF--KDSIKRSDYQLTIEPLLDQETSGGATQLTATCLLQRRQVFRRNLV 311
Query: 218 DFLKDH 223
+ +K+H
Sbjct: 312 ERVKEH 317
>gi|340715720|ref|XP_003396357.1| PREDICTED: DNA replication factor Cdt1-like [Bombus terrestris]
Length = 714
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%)
Query: 92 SSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSL 151
SS+ +G+ LP Y LAE F +D V +L + + TF + P ++ L + F+L
Sbjct: 307 SSLAESGTSGLPLPYHYKFLAEAFRCVDTVSAMLFNRKETITFKKLKPAVQELLRKNFTL 366
Query: 152 GHLAQLKFILPE 163
HLAQ+K I P+
Sbjct: 367 EHLAQMKTIFPD 378
>gi|431838568|gb|ELK00500.1| DNA replication factor Cdt1 [Pteropus alecto]
Length = 552
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 15/222 (6%)
Query: 13 RCKKPITAKPKPEMSNQNPNPTQLASKTPEKQPSRRARNSRMALSLKEIRKAAQTN---P 69
+ KK I+A P ++ Q A+ + K +RAR + ++E+R + Q N
Sbjct: 103 KTKKVISAGQLPNLAPQEDKVPSKATFSELKLCLQRARE--LGARVQELRTSTQRNDAGE 160
Query: 70 QQPPKDQIESAGKQISASPSVKSSVNPAGSGSPKL--PAKYMQLAECFDSLDAVIRLLKL 127
P+ + AG +P+ + A G P L P KY LAE F S+D ++ +L
Sbjct: 161 SSTPEAKEHPAGPCGEKAPAYQRFHALAQPGLPGLVLPYKYQVLAEMFRSMDTIVGMLYN 220
Query: 128 KCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKK---VLTFDEKTSCMKPDL 184
+ + TF + ++ + +RF ++ Q+K + P + ++ V TF K K D
Sbjct: 221 RSETVTFAKVKQGVQDMMRKRFEERNVGQIKTVYPTSYRFRQERNVPTF--KDGFKKSDY 278
Query: 185 HVTVNADAIECDGK---SKCNSKNLNLRTVFRARLMDFLKDH 223
+T+ + G S+ L R VF L++ +++H
Sbjct: 279 QLTIEPLLDQEIGNMVPQLTASRLLQRRQVFSQNLVERVREH 320
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 509 ENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELI 568
++L++ IR KE + + + + R Q + LP+L ++ +F S ++ +T E
Sbjct: 427 QDLLERIRAKEAQKQLAQMTRRPEQEQRLQRLERLPELARVLRSIFVSERKLALTMEVAC 486
Query: 569 HKIISSHLQITDRREVEEQMNLMLELVPEWIS---------EKLSSCGDLLVCINKMTC 618
+++ S+ E+E+ + L+ EL+P+W+S KL DL V ++ C
Sbjct: 487 TRMVGSYHTAMSPGEMEKHVQLLSELLPDWLSLHRIRTDTYVKLDKAADLAVVTARLAC 545
>gi|195028195|ref|XP_001986962.1| GH21650 [Drosophila grimshawi]
gi|193902962|gb|EDW01829.1| GH21650 [Drosophila grimshawi]
Length = 718
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 99 SGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLK 158
+G LP KY L E F LD+V+ + + TF + P ++ + + F+ HL+Q+K
Sbjct: 303 AGQLPLPYKYRNLLEIFKGLDSVVAMFHNRKECITFKKLKPAVQRMLRKNFTETHLSQIK 362
Query: 159 FILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIE 194
+ PE I + S K D H V + +E
Sbjct: 363 HLYPEAF-IFSQMKMRNYGSVSKADYHQLVISPNVE 397
>gi|327289642|ref|XP_003229533.1| PREDICTED: DNA replication factor Cdt1-like [Anolis carolinensis]
Length = 521
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S D ++ +L + + TF + ++ + ++F ++ Q+K + PE
Sbjct: 167 LPYKYRVLAEMFRSADTIVGMLFNRSETATFAKVKQGVQDMMRKQFEERNVGQIKTVFPE 226
Query: 164 ---VIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDFL 220
+ Q K V TF + D +T + + G+ S+ + R VF L++ +
Sbjct: 227 SYILRQEKNVPTF-RSGGPKQSDYQLTF--EPVLEAGEKLSASRLMERRKVFSRNLVNIV 283
Query: 221 KDH 223
K H
Sbjct: 284 KSH 286
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 509 ENLIQSIREKERKFMEE---RDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKE 565
++L++ IR KE + ++ RDP Q + R M+ LP++ ++ +F + K+ +T E
Sbjct: 395 QSLLERIRAKEAQKLQAQMTRDP---QQELRLGMMGRLPEMARVLRNVFVAEKKPALTLE 451
Query: 566 ELIHKIISSHLQITDRREVEEQMNLMLELVPEWISEKLSSCGDLLVCINK 615
++++S+ + E+E + L+ EL+P W+S LS D + ++K
Sbjct: 452 AACQRMLASYRSLMTPGEMEGHLRLLSELLPSWVS-VLSVRKDTYIKLDK 500
>gi|444722185|gb|ELW62883.1| DNA replication factor Cdt1 [Tupaia chinensis]
Length = 730
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 100 GSPKL--PAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQL 157
G+P L P KY LAE F +D V+ L + + TF + ++ + +RF ++ Q+
Sbjct: 368 GAPGLVLPYKYQVLAEMFRGMDTVVGWLHNRRETATFAKVQQGVQDMLRKRFEERNVGQI 427
Query: 158 KFILPEVIQIKK---VLTFDEKTSCMKPDLHVTVNA--DAIECDGKSKCNSKN--LNLRT 210
K + P + ++ V TF K + D +T+ DA E G + + + L R
Sbjct: 428 KAVYPASYRFRQERNVPTF--KDGVRRSDYQLTIEPLLDA-EAGGTAPQLTASCLLRRRR 484
Query: 211 VFRARLMDFLKDH 223
VF +L++ +++H
Sbjct: 485 VFSQKLLERVREH 497
>gi|195455396|ref|XP_002074705.1| GK23207 [Drosophila willistoni]
gi|194170790|gb|EDW85691.1| GK23207 [Drosophila willistoni]
Length = 721
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 92 SSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSL 151
S V + +G LP KY L + F LD+V+ + + TF + P ++ + + F+
Sbjct: 314 SLVETSKAGQLPLPFKYRHLLDIFKGLDSVVAMFHNRKECITFKKLKPAVQRMLRKNFTE 373
Query: 152 GHLAQLKFILPEV 164
HLAQ+K + P+
Sbjct: 374 SHLAQIKHVYPDA 386
>gi|110331815|gb|ABG67013.1| DNA replication factor [Bos taurus]
Length = 366
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + + TF + ++ + +RF ++ Q+K + P
Sbjct: 6 LPYKYQVLAEMFRSMDTIVGMLYNRSETVTFAKVKQGVQDMMRKRFEERNVGQIKTVYPG 65
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVNADAIECDGKSK---CNSKNLNLRTVFRARLM 217
++ V TF K + D +T+ + G + S+ L R VF L+
Sbjct: 66 SYHFRQERFVPTF--KDGIKRSDYQLTIEPLLDQQAGSAAPQLTASRLLQRRQVFSQNLV 123
Query: 218 DFLKDHPEGD--------EIPEETL 234
+++H E+PE+ L
Sbjct: 124 ARVREHHRAFLASLNPPMEVPEDQL 148
>gi|291415845|ref|XP_002724160.1| PREDICTED: cdc dependent transcript 1-like [Oryctolagus cuniculus]
Length = 574
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 26/214 (12%)
Query: 70 QQPPKDQIESAGKQISASPSVKSSVNPAGSGSPKL--PAKYMQLAECFDSLDAVIRLLKL 127
Q+ P D E G ++ +P+ + A G+P L P KY LAE F S+D ++ LL
Sbjct: 181 QKRPPDPAEQQG--VAEAPAYQRFHALAQPGAPGLVLPYKYQVLAEMFRSMDTIVGLLHN 238
Query: 128 KCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKK---VLTFDEKTSCMKPDL 184
+ + TF + ++ + +RF ++ Q+K + P + ++ V TF + +
Sbjct: 239 RSETATFAKVQQGVQDMMRKRFEERNVGQIKAVYPGSYRFRQERNVPTFTDGAK--RSQY 296
Query: 185 HVTVNADAIECDGKSKCNSKN--LNLRTVFRARLMDFLKDHPEGD--------EIPEETL 234
+T+ + G + + L R VF L+ +++H + +PEE L
Sbjct: 297 QLTIEPLLGQDAGPAPPLTATCLLQRRQVFSQNLLRRVQEHHKAFLASLDPPMAVPEEQL 356
Query: 235 PEPFNRSRSDLQLNMVKKSTSLTPADSPTDASVE 268
R R D + + PA+ P +VE
Sbjct: 357 KRWHPRFRVD-------EVPDIEPAELPQPPAVE 383
>gi|195384633|ref|XP_002051019.1| GJ19871 [Drosophila virilis]
gi|194145816|gb|EDW62212.1| GJ19871 [Drosophila virilis]
Length = 721
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 99 SGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLK 158
+G LP KY L E F ++D+V+ + + TF + P ++ + + F+ HLAQ+K
Sbjct: 308 AGQLPLPYKYRHLLEVFKAVDSVVAMFHNRKECITFKKLKPAVQRMLRKNFTEMHLAQIK 367
Query: 159 FILPEVI 165
+ P+
Sbjct: 368 HVYPDAF 374
>gi|432104871|gb|ELK31383.1| DNA replication factor Cdt1 [Myotis davidii]
Length = 490
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + + TF + ++ + +RF ++ Q+K + P
Sbjct: 134 LPYKYQVLAEMFRSMDTIVGMLYNRSETVTFAKVKQGVQDMMRKRFEERNVGQIKTVYPT 193
Query: 164 VIQIKK---VLTFDEKTSCMKPDLHVTVNADAIECDGKSK---CNSKNLNLRTVFRARLM 217
+ ++ + TF K + + D +T+ + G S+ L R VF L+
Sbjct: 194 SYRFRQERNIPTF--KDNVKRSDYQLTIEPLLDQEVGNVAPQLTASRLLQRRQVFSQNLV 251
Query: 218 DFLKDH 223
+ +++H
Sbjct: 252 ERVREH 257
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 509 ENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELI 568
++L++ IR KE + + + + R Q + LP+L ++ +F S ++ +T E
Sbjct: 364 QDLLERIRAKEVQKQLAQMTRCPEQEQRLQRLERLPELARVLRSIFVSERKPALTMEVAC 423
Query: 569 HKIISSHLQITDRREVEEQMNLMLELVPEWIS---------EKLSSCGDLLVCINKMTC 618
+++ S+ E+E+ + L+ EL+P+W+S KL DL ++ C
Sbjct: 424 ARMVGSYRVAMSSGEMEKHVQLLSELLPDWLSLHRIRTDTYVKLDKAADLASVTAQLAC 482
>gi|198459342|ref|XP_001361344.2| GA20864 [Drosophila pseudoobscura pseudoobscura]
gi|198136659|gb|EAL25922.2| GA20864 [Drosophila pseudoobscura pseudoobscura]
Length = 730
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 99 SGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLK 158
+G LP KY L + F LD+V+ + + TF + P ++ + + F+ HLAQ+K
Sbjct: 306 AGQLPLPYKYRYLLDVFKGLDSVVAMFHNRKECITFKKLKPAVQRMLRKNFTELHLAQIK 365
Query: 159 FILPEVI 165
+ PE
Sbjct: 366 AVYPEAF 372
>gi|195172654|ref|XP_002027111.1| GL20043 [Drosophila persimilis]
gi|194112924|gb|EDW34967.1| GL20043 [Drosophila persimilis]
Length = 730
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 99 SGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLK 158
+G LP KY L + F LD+V+ + + TF + P ++ + + F+ HLAQ+K
Sbjct: 306 AGQLPLPYKYRYLLDVFKGLDSVVAMFHNRKECITFKKLKPAVQRMLRKNFTELHLAQIK 365
Query: 159 FILPEVI 165
+ PE
Sbjct: 366 AVYPEAF 372
>gi|281346855|gb|EFB22439.1| hypothetical protein PANDA_020199 [Ailuropoda melanoleuca]
Length = 379
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
Query: 98 GSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQL 157
G S LP KY LAE F S+D ++ +L + + TF + ++ + +RF ++ Q+
Sbjct: 17 GPPSLVLPYKYQVLAEMFRSMDTIVGMLYNRSETVTFAKVKQGVQDMMRKRFEERNVGQI 76
Query: 158 KFILPEVIQIKK---VLTFDEKTSCMKPDLHVTVNADAIECDGKSK---CNSKNLNLRTV 211
+ + P + ++ V TF K + D +T+ G + S+ L R V
Sbjct: 77 RTVYPTSYRFRQERNVPTF--KDGVKRSDYQLTIEPLLDREAGSTAPQLTASRLLQRRQV 134
Query: 212 FRARLMDFLKDH 223
F L++ +++H
Sbjct: 135 FSQNLVERVREH 146
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 536 RRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELV 595
R Q +A LP+L ++ +F S ++ +T E ++ S+++ E+E+ + L+ EL+
Sbjct: 280 RLQRLARLPELARVLRSVFVSERKPALTMEAACSRMAGSYVEAMSPGEMEQHVRLLSELL 339
Query: 596 PEWIS---------EKLSSCGDLLVCINKM 616
P+W+S KL DL + ++
Sbjct: 340 PDWLSLHRIRTDTYVKLDKAADLAGVVTRL 369
>gi|449472974|ref|XP_002192649.2| PREDICTED: DNA replication factor Cdt1 [Taeniopygia guttata]
Length = 696
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP K+ LAE F S+D + +L + + TF + ++ + R+F HL Q+K + P
Sbjct: 341 LPYKFRVLAEMFRSVDTIAGMLFNRAETVTFAKVKQGVQDMMRRQFEEQHLGQIKAVYPN 400
Query: 164 VIQIKK-----VLTFDEKTSCMKPDLHVTVNADAIECDGKSKCN-SKNLNLRTVFRARLM 217
++++ L+ K S + L + + + DG+ + S+ L R F L+
Sbjct: 401 SYRLRQEKNIPTLSSGGKKSEYQLTLEPVLGEEE-KVDGRPHLSASRLLERRREFHRNLV 459
Query: 218 DFLKDH 223
+ +++H
Sbjct: 460 NIVREH 465
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 48/92 (52%)
Query: 509 ENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELI 568
+ L++ +R KE + ++ + R +A LP + ++ +F + K++ ++ E L
Sbjct: 570 QGLLERVRAKEAARLAALLTRDARQEQRDARLARLPAMARVLRSVFVAEKKAALSMELLC 629
Query: 569 HKIISSHLQITDRREVEEQMNLMLELVPEWIS 600
++ S ++ E+E+ + L EL+P+W+
Sbjct: 630 ARLADSCPELVAPGEMEKHVRLFAELLPDWVG 661
>gi|332022480|gb|EGI62787.1| DNA replication factor Cdt1 [Acromyrmex echinatior]
Length = 704
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 73 PKDQIESAGKQISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSP 132
PK+ + S GK S + + ++ A SG LP Y LAE F +D V +L +
Sbjct: 279 PKETVSSPGKS-SPIKAYQKYLSVAESGLA-LPYDYRFLAEIFRCVDTVSAMLFNRKELI 336
Query: 133 TFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
TF + P ++ L R F+ HLAQ+K I P+
Sbjct: 337 TFNKLRPAVQELLRRNFTQEHLAQIKTIYPD 367
>gi|403333813|gb|EJY66031.1| hypothetical protein OXYTRI_13807 [Oxytricha trifallax]
Length = 1433
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILP 162
LPA Y L F +LD I L+ + + TFT+I ++ ++FS G+ AQ+ F+ P
Sbjct: 1011 LPAHYKSLMSLFCALDQTINFLRSRKLALTFTNIQKAVQQTMRKQFSQGNFAQIMFVAP 1069
>gi|363738246|ref|XP_423919.3| PREDICTED: DNA replication factor Cdt1 [Gallus gallus]
Length = 586
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILP- 162
LP KY LAE F S+D + +L + + TF + ++ + ++F H+ Q+K + P
Sbjct: 231 LPYKYKVLAEMFRSVDTIAGMLFNRAETITFAKVKQGVQDMMRKQFEERHVGQIKAVYPT 290
Query: 163 --EVIQIKKVLTFDE--KTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMD 218
Q K + T+ K S + L + D C S+ L R F L++
Sbjct: 291 SYRFRQEKNIPTYSSGVKKSQYQLTLEPVLGEDEQLCGRPHLSASRLLERRKEFHRSLVN 350
Query: 219 FLKDH 223
+K H
Sbjct: 351 IVKQH 355
>gi|198433008|ref|XP_002131268.1| PREDICTED: similar to Cdt1 protein [Ciona intestinalis]
Length = 685
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY L E F S D V+ +L + + T+ + ++ + R+F L L ++K + P+
Sbjct: 324 LPFKYKILQEMFQSADTVVSMLFNRQQTTTWLKLHKAVKDMIKRKFELNDLGRIKHVYPD 383
Query: 164 VI---QIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKS----KCNSKNL-NLRTVFRAR 215
Q + + T+D++ L + ECD S K NS L R F +
Sbjct: 384 AYTFRQERGIPTYDDRIKSTDYQLTIEPILTEEECDRASDEPRKLNSGMLVRRRHNFHLQ 443
Query: 216 LMDFLKDH 223
L+ +K H
Sbjct: 444 LLSLVKFH 451
>gi|67613252|ref|XP_667289.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54658403|gb|EAL37053.1| hypothetical protein Chro.40244 [Cryptosporidium hominis]
Length = 727
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 103 KLPAKYMQLAECFDSLDAVIRLLKLKCSSPTF--TSICPKIECLTDRRFSLGHLAQLKFI 160
KL KY L E F L+ V+RLL+ + P F T I ++E +T + FSL +L ++ +I
Sbjct: 241 KLSEKYEYLIEIFQGLEIVLRLLE-RRQKPFFYPTFIKEQVENITKKTFSLDNLLRIVWI 299
Query: 161 LPEVIQIK 168
P++I IK
Sbjct: 300 SPQLISIK 307
>gi|348669582|gb|EGZ09404.1| hypothetical protein PHYSODRAFT_523860 [Phytophthora sojae]
Length = 342
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 60/98 (61%), Gaps = 7/98 (7%)
Query: 504 LDILPENLIQSIREKERKFMEERDPAISQAK-WRRQMIASLPKLFNMIHFLFQSIKRSVI 562
L LPE LI +R++E + +D A + AK +++++++LP+L + + L ++S+
Sbjct: 218 LKTLPEWLINKVRKQE---LGRKDVAENSAKALKKRLLSTLPQLSDQLQSLVMVTRKSIF 274
Query: 563 TKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWIS 600
K E++ ++ + + + ++EEQ+ ++ LVPEW++
Sbjct: 275 PKSEVLRRLAA---RAPIKGKIEEQLYMLESLVPEWLT 309
>gi|307111116|gb|EFN59351.1| hypothetical protein CHLNCDRAFT_137796 [Chlorella variabilis]
Length = 527
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 103 KLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILP 162
+LP K L + F L V +++ + T+ + +E + RRF + H+AQL+ +LP
Sbjct: 93 ELPRKLAALLDMFAGLQTVYEMMRRRGQRTTYQHMRQAVEEASGRRFLMAHVAQLQHLLP 152
Query: 163 EVIQIKKV-LTFDEKTSCMKPDLHVTV 188
E + ++ V L +S +P L +++
Sbjct: 153 EALVVEWVRLPVAAHSSRTEPHLLLSL 179
>gi|323398755|gb|ADX62069.1| CDT1 protein [Coturnix japonica]
Length = 588
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILP- 162
LP KY LAE F S+D + +L + + TF + ++ + ++F H+ Q+K + P
Sbjct: 233 LPYKYKVLAEMFRSVDTIAGMLFNRSETITFAKVKQGVQDMMRKQFEERHVGQIKAVYPM 292
Query: 163 --EVIQIKKVLTFDE--KTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMD 218
Q K + T+ K S + L + D C S+ L R F L++
Sbjct: 293 SYRFRQEKNIPTYSSGVKKSQYQLTLEPVLGEDEQLCGRPHLSASRLLERRKEFHRSLVN 352
Query: 219 FLKDH 223
+K H
Sbjct: 353 IVKQH 357
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 51/97 (52%)
Query: 504 LDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVIT 563
L + + L++ IR KE + ++ + + R M+ LP + ++ +F + K+ +
Sbjct: 457 LKGVSQALLERIRAKEARRLQVLMTRAVEQEERLAMMGRLPAMARILRGVFVAEKKPALP 516
Query: 564 KEELIHKIISSHLQITDRREVEEQMNLMLELVPEWIS 600
E L +++ S+ E+E+ + L+ EL+P+W++
Sbjct: 517 MELLCARMVDSYPTEMAAGEMEKHLRLLAELLPDWVT 553
>gi|125569307|gb|EAZ10822.1| hypothetical protein OsJ_00658 [Oryza sativa Japonica Group]
Length = 222
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 46 SRRARNSRMALSLKEIRKAAQTNPQQPPKDQIESAGKQISASP-SVKSSVNPAGSGSPKL 104
SR R + + L R AA P + D++E+ +Q+ P SV+S V KL
Sbjct: 11 SRGVRRAALELRQWSERGAASLAPDE---DELEAVERQLDVGPTSVRSPVKRKA----KL 63
Query: 105 PAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRR 148
P Y L E F+ ++ +LL++K S +F +IC + L++R+
Sbjct: 64 PESYEMLCEFFNCFESSTQLLRMKGSKASFPNICATTQHLSERK 107
>gi|390368174|ref|XP_003731403.1| PREDICTED: uncharacterized protein LOC100892412 [Strongylocentrotus
purpuratus]
Length = 402
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 97 AGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQ 156
AG S LP +Y L + F D V+ +L + + TF+ + ++ ++ + F L HL Q
Sbjct: 284 AGPSSLALPFRYRSLEDVFRCSDTVVSMLHNRSENCTFSKLKGGVQAMSRKNFDLSHLKQ 343
Query: 157 LKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECD 196
+K + P + + +K S K D + + +E D
Sbjct: 344 IKTVYPSAYDMH----WTKKESQQKKDEESSTHQLILEAD 379
>gi|119587168|gb|EAW66764.1| DNA replication factor, isoform CRA_c [Homo sapiens]
Length = 386
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 115 FDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKK---VL 171
F S+D ++ +L + +PTF + ++ + RRF ++ Q+K + P + ++ V
Sbjct: 2 FRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEERNVGQIKTVYPASYRFRQERSVP 61
Query: 172 TFDEKTSCMKPDLHVTVN-ADAIECDGKSK--CNSKNLNLRTVFRARLMDFLKDH 223
TF + T + D +T+ E DG + S+ L R +F +L++ +K+H
Sbjct: 62 TFKDGTR--RSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQKLVEHVKEH 114
>gi|158293982|ref|XP_315335.4| AGAP005321-PA [Anopheles gambiae str. PEST]
gi|157015353|gb|EAA11814.5| AGAP005321-PA [Anopheles gambiae str. PEST]
Length = 745
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 26/190 (13%)
Query: 79 SAGKQISASP----SVKSSVNPAGSGSP--KLPAKYMQLAECFDSLDAVIRLLKLKCSSP 132
+AG + ASP + + N +G P +LP KY L E F D V +L +
Sbjct: 316 TAGTPVMASPKKLPAYQRFHNLVEAGVPTLQLPFKYRSLLELFKCTDTVCSMLHNRKEQI 375
Query: 133 TFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVN--- 189
TF + P ++ + + F HLAQ+ + P+ + + +T + ++ + +
Sbjct: 376 TFKKLKPAVQRMARKNFFESHLAQIYSLFPDAFTLSQEMTKNYGSATKHETYQLVIRPNI 435
Query: 190 ADA-------------IECDGKSKCNSKNLNLRTV-FRARLMDFLKDHPEGDEIPEETLP 235
ADA I + K NS++L R FR L++ KD + +TL
Sbjct: 436 ADAPEEPARKAAEDDFIRTNTKPAVNSQSLLERYQHFRRLLLERTKD---AHQAFLQTLD 492
Query: 236 EPFNRSRSDL 245
P N RS +
Sbjct: 493 PPLNIDRSKI 502
>gi|302595916|sp|Q9I9A7.2|CDT1_XENLA RecName: Full=DNA replication factor Cdt1; Short=XCDT1
Length = 617
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 103/259 (39%), Gaps = 44/259 (16%)
Query: 6 SPQSIHFRCKKPITAKPKPEMSNQNPNPTQLASKTPEKQ-----PSRRARNSRMALSLK- 59
+P S+ + K + P+ + NPT +K+P K+ SR R +A +
Sbjct: 127 TPSSLGKKIKDMVNVSLSPKFNELARNPTTPETKSPAKENLLELKSRLQRIQELAQKVNL 186
Query: 60 --------------------------EIRKAAQTNPQQPPKDQIESAGKQISASPSVKSS 93
+IR A+ Q D E ++ +P+ +
Sbjct: 187 PAASSEGKVTITDLKARLKRAQELDTKIRAKAEKTETQAI-DLTEQPAQESEKAPAYQRF 245
Query: 94 VNPAGSGSPK--LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSL 151
N A +P LP KY LAE F S+D ++ +L + + TF+ + ++ + ++F
Sbjct: 246 HNLAQDAAPGLTLPYKYKVLAEMFRSMDTIVGMLFNRSETITFSKVKQGVQDMMRKQFEQ 305
Query: 152 GHLAQLKFILPEVI---QIKKVLTFDEKTSCMKPDLHVTVNADAIECD---GKSKCN-SK 204
++ Q+K + P Q K + TF K K D +T+ E D G+ + S+
Sbjct: 306 RNVGQIKTVYPNAYKYRQEKNIPTF--KDGVKKTDYQLTIEPLVAEGDMLSGRPHLSASR 363
Query: 205 NLNLRTVFRARLMDFLKDH 223
L + +F L +K H
Sbjct: 364 LLERKQLFHRSLTSIVKQH 382
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 64/126 (50%)
Query: 475 LKSLKFDTPVKNATVEHKLNEDISVDGDVLDILPENLIQSIREKERKFMEERDPAISQAK 534
LK+ + KN + E + + L + ++L++ IR KE + ++ Q +
Sbjct: 457 LKTAENAGETKNVSTEETKSTATTSTSTALKGVSQSLLERIRAKEAQKLQAIMTRRPQQE 516
Query: 535 WRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLEL 594
R M++ LP+L ++ +F + K+ +T E ++I+S E+E+ + L+ E+
Sbjct: 517 ERLLMMSRLPELARILRNVFVAEKKPALTLEVTCSRVIASCRSSMSPGEMEKHLALLSEI 576
Query: 595 VPEWIS 600
+P+W+S
Sbjct: 577 LPDWLS 582
>gi|312376516|gb|EFR23576.1| hypothetical protein AND_12656 [Anopheles darlingi]
Length = 743
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Query: 33 PTQLASKTPEKQPSRRARN----SRMALSLKEIRKAAQTNPQQPPKDQIESAGKQISASP 88
PT++ KTP K + ++N SR+A + I++A+ P I ++ K++ A
Sbjct: 282 PTKIL-KTPTKSAASPSKNVTPKSRLAELMSPIKEASAATP-------IMASPKKVPAYQ 333
Query: 89 SVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRR 148
++ AG S LP KY L E F +D VI + + TF + P ++ + +
Sbjct: 334 RF-HALAIAGPPSLHLPYKYRSLLELFKCIDTVISMFHNRKEQITFKKLKPAVQRMARKN 392
Query: 149 FSLGHLAQLKFILP 162
F HLAQ++ + P
Sbjct: 393 FFESHLAQIQHLYP 406
>gi|148230272|ref|NP_001081738.1| DNA replication factor Cdt1 [Xenopus laevis]
gi|7573546|emb|CAB87836.1| putative CDT1 protein [Xenopus laevis]
Length = 620
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 103/259 (39%), Gaps = 44/259 (16%)
Query: 6 SPQSIHFRCKKPITAKPKPEMSNQNPNPTQLASKTPEKQ-----PSRRARNSRMALSLK- 59
+P S+ + K + P+ + NPT +K+P K+ SR R +A +
Sbjct: 130 TPSSLGKKIKDMVNVSLSPKFNELARNPTTPETKSPAKENLLELKSRLQRIQELAQKVNL 189
Query: 60 --------------------------EIRKAAQTNPQQPPKDQIESAGKQISASPSVKSS 93
+IR A+ Q D E ++ +P+ +
Sbjct: 190 PAASSEGKVTITDLKARLKRAQELDTKIRAKAEKTETQAI-DLTEQPAQESEKAPAYQRF 248
Query: 94 VNPAGSGSPK--LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSL 151
N A +P LP KY LAE F S+D ++ +L + + TF+ + ++ + ++F
Sbjct: 249 HNLAQDAAPGLTLPYKYKVLAEMFRSMDTIVGMLFNRSETITFSKVKQGVQDMMRKQFEQ 308
Query: 152 GHLAQLKFILPEVI---QIKKVLTFDEKTSCMKPDLHVTVNADAIECD---GKSKCN-SK 204
++ Q+K + P Q K + TF K K D +T+ E D G+ + S+
Sbjct: 309 RNVGQIKTVYPNAYKYRQEKNIPTF--KDGVKKTDYQLTIEPLVAEGDMLSGRPHLSASR 366
Query: 205 NLNLRTVFRARLMDFLKDH 223
L + +F L +K H
Sbjct: 367 LLERKQLFHRSLTSIVKQH 385
>gi|390351991|ref|XP_781248.3| PREDICTED: DNA replication factor Cdt1-like [Strongylocentrotus
purpuratus]
Length = 685
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 97 AGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQ 156
AG S LP +Y L + F D V+ +L + + TF+ + ++ ++ + F L HL Q
Sbjct: 285 AGPSSLALPFRYRSLEDVFRCSDTVVSMLHNRSENCTFSKLKGGVQAMSRKNFDLSHLKQ 344
Query: 157 LKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECD 196
+K + P + + +K S K D + + +E D
Sbjct: 345 IKTVYPSAYD----MHWTKKESQQKKDEESSTHQLILEAD 380
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 38/64 (59%)
Query: 536 RRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKIISSHLQITDRREVEEQMNLMLELV 595
R M+ LP L ++ F + K++ + + +I K++ S+ R ++E+ + LMLE++
Sbjct: 586 RIGMLERLPVLCKILRVFFLAEKKAALPIDSIIQKLMESYRSALSRDDLEKHIALMLEIL 645
Query: 596 PEWI 599
P+W+
Sbjct: 646 PDWL 649
>gi|66357258|ref|XP_625807.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|46226908|gb|EAK87874.1| hypothetical protein cgd4_2150 [Cryptosporidium parvum Iowa II]
Length = 727
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 103 KLPAKYMQLAECFDSLDAVIRLLKLKCSSPTF--TSICPKIECLTDRRFSLGHLAQLKFI 160
KL KY L E F L+ V+RLL+ + P F T I ++E +T + FSL +L ++ +I
Sbjct: 241 KLSEKYEYLIEIFQGLEIVLRLLE-RRQKPFFYPTFIKEQVENITKKTFSLDNLLRIVWI 299
Query: 161 LPEVIQIK 168
P++I I+
Sbjct: 300 SPQLISIR 307
>gi|91078768|ref|XP_969028.1| PREDICTED: similar to DNA replication factor Cdt1 [Tribolium
castaneum]
gi|270004101|gb|EFA00549.1| hypothetical protein TcasGA2_TC003416 [Tribolium castaneum]
Length = 577
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 93 SVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLG 152
S+ P G +LP KY L E F S+D V ++L + TF + P +E + R
Sbjct: 226 SLTPQGL---QLPFKYKTLTELFRSIDTVSQILFNRKEVITFRKLKPAVEEMVKRNLLEK 282
Query: 153 HLAQLKFILPEVIQIK--KVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRT 210
HLAQ+K + P + K+ F T + +L +T N + + + ++ R
Sbjct: 283 HLAQIKSVYPTAYNFRQEKLKVFG--TREERWELVLTPNL----TNSEDMTSQVLIDRRR 336
Query: 211 VFRARLMDFLKDH 223
VF L+D +KD+
Sbjct: 337 VFTETLIDKVKDY 349
>gi|395856945|ref|XP_003800877.1| PREDICTED: DNA replication factor Cdt1 [Otolemur garnettii]
Length = 554
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY LAE F S+D ++ +L + + TF + ++ + +RF ++ Q+K + P
Sbjct: 199 LPYKYQVLAEMFRSMDTIVGMLFNRAETVTFAKVKQGVQDMIRKRFEEHNVGQIKTVYPA 258
Query: 164 VI---QIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKC----NSKNLNLRTVFRARL 216
Q + + TF K + D +T+ ++ + S S L R VF +L
Sbjct: 259 SYCFRQERNIPTF--KDGVRRSDYQLTIEP-LLDQETSSAVPQLTASHLLQRRQVFGQKL 315
Query: 217 MDFLKDH 223
++ ++H
Sbjct: 316 LERAREH 322
>gi|395509376|ref|XP_003758974.1| PREDICTED: DNA replication factor Cdt1 [Sarcophilus harrisii]
Length = 583
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 80/171 (46%), Gaps = 13/171 (7%)
Query: 62 RKAAQTNPQQPPKDQIESAGKQISASPSVKSSVNPAGSGSPKL--PAKYMQLAECFDSLD 119
+K ++ PQ+ + ES + + +P+ + A +G P L P KY LAE F S+D
Sbjct: 179 KKNEESGPQKVEEPTAESCSQ--APAPAYERFHTLAQAGPPGLTLPYKYKVLAEMFRSMD 236
Query: 120 AVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKK---VLTFDEK 176
V+ +L + + TF + ++ + +RF ++ Q+K + P + ++ + TF+
Sbjct: 237 TVVGMLFNRSETVTFAKVKQGVQDMLRKRFEERNVGQIKTVYPASYRFRQERNIPTFN-- 294
Query: 177 TSCMKPDLHVTVN-ADAIECDGKSKCN---SKNLNLRTVFRARLMDFLKDH 223
+ D +T+ + DG+ S+ L R F L++ +K+
Sbjct: 295 NGVKRSDYQLTIEPLLEQDKDGERAAQLSASRLLQRRHTFSRNLVNLVKEQ 345
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 54/99 (54%)
Query: 502 DVLDILPENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSV 561
L + + L++ IR KE + ++ Q + R M++ LP+L ++ +F + K+
Sbjct: 450 GALKGISQALLERIRAKETQRLQAMMTRKPQQEERLLMLSRLPELARILRGVFVAEKKPA 509
Query: 562 ITKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWIS 600
+T E +++SS+ E+E+ + ++ EL+P+W+S
Sbjct: 510 LTMEVACARMVSSYRSSMTSGEMEKHLQVLSELLPDWLS 548
>gi|159490844|ref|XP_001703383.1| DNA replication initiation factor [Chlamydomonas reinhardtii]
gi|158280307|gb|EDP06065.1| DNA replication initiation factor [Chlamydomonas reinhardtii]
Length = 1103
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 16/89 (17%)
Query: 111 LAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKV 170
LA FD+L +LK + T+ S+ +E +T R F + HLAQ+K + PE + + +
Sbjct: 79 LAAMFDALQTGRMMLKRRAEKVTYNSVKHVVENVTRREFRVEHLAQMKGLRPESFEWQYI 138
Query: 171 LT----------------FDEKTSCMKPD 183
T FD + + PD
Sbjct: 139 RTAPPGNPLQLETQLLLTFDRAAAVLGPD 167
>gi|405974953|gb|EKC39560.1| hypothetical protein CGI_10010762 [Crassostrea gigas]
Length = 730
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 514 SIREKERKFMEE---RDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHK 570
+IR KE K E RDP+ + R MI LP++ ++ F + K+ + + +I K
Sbjct: 464 NIRAKEAKKQEMSMMRDPSEDK---RTLMIRRLPEMMRILRTHFVTEKKPALPMQNIIQK 520
Query: 571 IISSHLQITDRREVEEQMNLMLELVPEWIS 600
+ S+ +VE M L+L+ VPEW++
Sbjct: 521 LADSYKTTIRFDDVETHMKLLLDFVPEWLT 550
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 13/119 (10%)
Query: 64 AAQTNPQQPPKDQIESAGKQISASPSVKSSVNPAGSGSPK-------------LPAKYMQ 110
AAQ P P D+ E+ Q+ S + P + LP KY
Sbjct: 320 AAQAKPDVPALDKFEALEVQVKQSDKSEPVSEPKAPAYERFHHLSTPAPPSLSLPYKYRL 379
Query: 111 LAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKK 169
+ + F S+D + +L + TF+ + ++ +T R F ++ Q+K + PE ++
Sbjct: 380 VEDMFKSMDTAVSMLHNRSEICTFSKLKSAVQEMTKRNFEQKNVGQIKTVYPEAYTFRQ 438
>gi|326927532|ref|XP_003209946.1| PREDICTED: DNA replication factor Cdt1-like [Meleagris gallopavo]
Length = 443
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 9/127 (7%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILP- 162
LP KY LAE F ++D + +L + + TF + ++ + ++F H+ Q+K + P
Sbjct: 147 LPYKYKVLAEMFRNVDTIAGMLFNRAETITFAKVKQGVQDMMRKQFEERHVGQIKAVYPT 206
Query: 163 --EVIQIKKVLTFDEKTSCMKPDLHVT----VNADAIECDGKSKCNSKNLNLRTVFRARL 216
Q K + T+ + K D +T + D C S+ L R F L
Sbjct: 207 SYRFRQEKNIPTYS--SGVKKSDYQLTLEPVLGEDEQLCGRPHLSASRLLERRKEFHRSL 264
Query: 217 MDFLKDH 223
++ +K H
Sbjct: 265 VNIVKQH 271
>gi|195120546|ref|XP_002004785.1| GI20103 [Drosophila mojavensis]
gi|193909853|gb|EDW08720.1| GI20103 [Drosophila mojavensis]
Length = 697
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 99 SGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLK 158
+G LP K+ L E F LD+V+ + + TF + P ++ + + F+ HLAQ+K
Sbjct: 309 AGQLPLPYKHRHLLEVFRCLDSVVAMFHNRKECITFKKLKPAVQRMLRKNFTEMHLAQIK 368
Query: 159 FILPEV 164
+ P+
Sbjct: 369 HVYPDA 374
>gi|322790731|gb|EFZ15475.1| hypothetical protein SINV_06823 [Solenopsis invicta]
Length = 718
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP Y LAE F +D V +L + TF + P ++ L R F+ HLAQ+K I P+
Sbjct: 324 LPYNYRFLAEIFRCVDTVSAMLFNRKELITFNKLKPAVQELLRRNFTQEHLAQIKTIYPD 383
>gi|307179512|gb|EFN67826.1| DNA replication factor Cdt1 [Camponotus floridanus]
Length = 693
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP Y LAE F +D V +L + TF + P ++ R F+L HLAQ+K I P+
Sbjct: 291 LPYNYRFLAELFRCVDMVSAMLFNRKEVITFNKLKPAVQEQVRRNFTLEHLAQIKTIYPD 350
>gi|170047892|ref|XP_001851439.1| DNA replication factor Cdt1 [Culex quinquefasciatus]
gi|167870137|gb|EDS33520.1| DNA replication factor Cdt1 [Culex quinquefasciatus]
Length = 711
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 97 AGSGSP--KLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHL 154
A SG P +LP KY L E F +D V + + TF + P ++ + + F HL
Sbjct: 329 ADSGRPALQLPYKYRCLGELFKCIDTVCAMFHNRKEQITFRKLKPAVQRMARKNFYESHL 388
Query: 155 AQLKFILPEVIQIKKVLT 172
AQ+ + P+ + + +T
Sbjct: 389 AQINTLFPDAFLLSQEMT 406
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 504 LDILPENLIQSIREKER-KFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVI 562
L +P++L++ IR K+ K +++ SQ K LP++ + +F + ++SV+
Sbjct: 580 LKNVPKSLLEKIRAKQAAKALDQMTRRPSQEK-EAITYGRLPEIARHLRNVFVTERKSVL 638
Query: 563 TKEELIHKIISSHLQITDRREVEEQMNLMLELVPEWIS 600
E + KI +S+ R++EE + +M +LVP W++
Sbjct: 639 PLESALVKIENSYRGKLTLRDLEEHLKIMAQLVPFWLT 676
>gi|302844998|ref|XP_002954038.1| hypothetical protein VOLCADRAFT_94831 [Volvox carteri f.
nagariensis]
gi|300260537|gb|EFJ44755.1| hypothetical protein VOLCADRAFT_94831 [Volvox carteri f.
nagariensis]
Length = 758
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 27/126 (21%)
Query: 115 FDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEV---------- 164
FD+L +LK + T++++ +E +T R F + HLAQ+K++ P+
Sbjct: 2 FDALRTGRMMLKRRSEKVTYSNVRHVVENMTKREFRVEHLAQIKYLRPQAFDWQYIRTPS 61
Query: 165 ------IQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMD 218
++I+ +LTFD TS L G S + FRA+L +
Sbjct: 62 ASNPLQMEIQLLLTFDRPTSSGAEGL-----------GGGSVGRYSGAAELSEFRAQLEE 110
Query: 219 FLKDHP 224
K +P
Sbjct: 111 HAKANP 116
>gi|449663644|ref|XP_002165280.2| PREDICTED: DNA replication factor Cdt1-like [Hydra magnipapillata]
Length = 540
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 511 LIQSIREKERKFMEER---DPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEEL 567
L++ I+ KE+K +E+ DPA+ + R ++ LP++ ++ F + K++ IT E+
Sbjct: 414 LLERIKLKEQKKIEQALTCDPAVIK---RMALMEKLPEMARILKTFFTAEKKAAITLEDC 470
Query: 568 IHKIISSHLQITDRREVEEQMNLMLELVPEWIS 600
+ K+ S+ E E+ + L+ ELVP W++
Sbjct: 471 LLKLCESYATAIPPSECEDLLRLLAELVPSWVT 503
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 76 QIESAGKQISASPSVKSSVNPAGSGSPKLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFT 135
++ +AG A K ++ + S S LP KY + E +D+++ LL + TF
Sbjct: 162 KLVNAGPNQPAYLKYKHLLHKSVSESLNLPNKYKVILEMIRCVDSILYLLNQRKEVCTFD 221
Query: 136 SICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNAD 191
+ ++ + R F+L HLA +K + P ++ + +K S + D H+T+ A+
Sbjct: 222 RLKQSVQSMNGRDFNLKHLASIKTVYPTGYVFRQEIL--QKISPV--DYHLTIEAN 273
>gi|357484643|ref|XP_003612609.1| hypothetical protein MTR_5g026900 [Medicago truncatula]
gi|355513944|gb|AES95567.1| hypothetical protein MTR_5g026900 [Medicago truncatula]
Length = 199
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 22/90 (24%)
Query: 149 FSLGHLAQLKFILPEVIQIKKVLTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNL 208
F+L LAQL +ILPE I + K+ DE C + +L V++ A E DG +L
Sbjct: 11 FTLRVLAQLVYILPERIIVNKIQLLDEH-GCSRSELEVSITTPAYE-DGLD-----DLKF 63
Query: 209 RTVFRARLMDFLKDHPEGDEIPEETLPEPF 238
R V +EIPE TLP PF
Sbjct: 64 RRV---------------EEIPEATLPPPF 78
>gi|241166241|ref|XP_002409825.1| DNA replication factor Cdt1, putative [Ixodes scapularis]
gi|215494649|gb|EEC04290.1| DNA replication factor Cdt1, putative [Ixodes scapularis]
Length = 421
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP Y QLAE F D ++ ++ + TF + P +E ++ +RFS L Q+K I PE
Sbjct: 75 LPFSYKQLAEQFRCCDTIVSMMFNRKEVCTFDKLKPSVEVMSKKRFSKDVLGQIKTIYPE 134
>gi|449282489|gb|EMC89322.1| DNA replication factor Cdt1, partial [Columba livia]
Length = 351
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILP- 162
LP K+ LAE F S+D + +L + + TF + ++ + ++F H+ Q+K + P
Sbjct: 19 LPYKFKVLAEMFRSVDTIAGMLFNRAETITFAKVKQGVQDMMRKQFEERHVGQIKAVYPT 78
Query: 163 --EVIQIKKVLTFDEKTSCMKPDLHVT---VNADAIECDGKSKCNS-KNLNLRTVFRARL 216
+ Q K + TF + K + +T V + + DG+ ++ + L R F L
Sbjct: 79 SYRLRQEKNIPTFG--SGMKKSEYQLTLEPVLGEEEKVDGRPHLSALRLLERRKEFNRNL 136
Query: 217 MDFLKDH 223
++ ++ H
Sbjct: 137 VNIVRQH 143
>gi|307194196|gb|EFN76613.1| DNA replication factor Cdt1 [Harpegnathos saltator]
Length = 721
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP Y LAE F ++ V +L + TF+ + P ++ L F+ H+AQ+K I PE
Sbjct: 321 LPYNYRFLAEVFRCVETVSAMLYNRKELITFSKLKPAVQELLRHNFTQDHMAQIKTIYPE 380
Query: 164 --VIQIKKVLTFDEKTSCMKPDLHVT 187
+ Q +K F + K +L +T
Sbjct: 381 AYIYQQEKHRKFGSVSKTEKYELVLT 406
>gi|170062611|ref|XP_001866745.1| DNA replication factor Cdt1 [Culex quinquefasciatus]
gi|167880479|gb|EDS43862.1| DNA replication factor Cdt1 [Culex quinquefasciatus]
Length = 436
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 97 AGSGSP--KLPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHL 154
A SG P +LP KY L E F +D V + + TF + P ++ + + F HL
Sbjct: 332 ADSGRPALQLPYKYRCLGELFKCIDTVCAMFHNRKEQITFRKLKPAVQRMARKNFYESHL 391
Query: 155 AQLKFILPEV 164
AQ+ + P+
Sbjct: 392 AQINTLFPDA 401
>gi|299470742|emb|CBN79788.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 618
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 44/90 (48%)
Query: 509 ENLIQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELI 568
E L + +R+K+ +ER+ + + R+ +LP + + + F R+ + + LI
Sbjct: 472 EALRERLRQKDALSAKERNKTEEEKEADRRRKGNLPAMADAVRSYFAHAGRTTCSLDVLI 531
Query: 569 HKIISSHLQITDRREVEEQMNLMLELVPEW 598
+ SS +E +++ ++ +VPEW
Sbjct: 532 EALSSSSKHALSHKEARDRVRMLASIVPEW 561
>gi|357499887|ref|XP_003620232.1| hypothetical protein MTR_6g078940 [Medicago truncatula]
gi|355495247|gb|AES76450.1| hypothetical protein MTR_6g078940 [Medicago truncatula]
Length = 118
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 583 EVEEQMNLMLELVPEWISEKLSSCGDLLVCINKMTCPESIRARL 626
E EEQ+ ++ ++VP+W +K+ S GD + CI + +S+R+RL
Sbjct: 65 EAEEQIEILQKIVPDWPCKKVVSSGDTMYCIKNASDLDSVRSRL 108
>gi|452821959|gb|EME28983.1| DNA replication factor Cdt1, putative [Galdieria sulphuraria]
Length = 466
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 507 LPENLIQSIREKERKFMEERDPAISQAKWRRQMIAS-LPKLFNMIHFLFQSIKRSVITKE 565
+ E L++ +RE+ER+ E A + + R Q++ S LPKL + I +F S K++V+ +
Sbjct: 344 ISEKLLKKVRERERR---ETQQATMKEQQREQIVLSRLPKLADAIRSIFISSKKTVLPFD 400
Query: 566 ELIHKIISSHLQITDRREVEEQMNLMLELVPEWI 599
L+ ++ + + E EQ+ +++ +P+W+
Sbjct: 401 LLLQQLKGQEMIPFSQEEFSEQIYEIVKRIPQWL 434
>gi|145351821|ref|XP_001420261.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580495|gb|ABO98554.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 304
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 512 IQSIREKERKFMEERDPAISQAKWRRQMIASLPKLFNMIHFLFQSIKRSVITKEELIHKI 571
+Q++ E++ DP+ + RR++ LP +F+ + F + KRSV+ + L+ ++
Sbjct: 178 VQAVLERQAIVEAFNDPSAVADRERRRLHGRLPHVFDAVRTAFAARKRSVMELDPLLDEL 237
Query: 572 ISSHLQI-TDRREVEEQMNLMLELVPEWISEKLSSCGD 608
+ ++ + E+ + + ++ + PEW + + GD
Sbjct: 238 MHTNARAEISAHELADGVRILARMCPEWCTIVHARHGD 275
>gi|19111988|ref|NP_595196.1| replication licensing factor Cdt1 [Schizosaccharomyces pombe 972h-]
gi|19859317|sp|P40382.2|CDT1_SCHPO RecName: Full=Cell division cycle protein cdt1
gi|3947882|emb|CAA22293.1| replication licensing factor Cdt1 [Schizosaccharomyces pombe]
Length = 444
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 10/124 (8%)
Query: 111 LAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKV 170
L + F+++D ++ + PTF + K+ LT + HLAQ+ + PE I
Sbjct: 94 LEKVFNAVDICVKFHLSINTKPTFVLLENKVSGLTKISLKITHLAQILTVWPESFAITPC 153
Query: 171 LTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDFLKDHPEGDEIP 230
T + +L NA+ E +S F+ RL +L +H EIP
Sbjct: 154 FTIHQGKRVATYELSYPRNANLPEAFSRS----------IEFKRRLEKWLLEHCSETEIP 203
Query: 231 EETL 234
+ L
Sbjct: 204 AQQL 207
>gi|357499889|ref|XP_003620233.1| Disease resistance-like protein GS5-3 [Medicago truncatula]
gi|355495248|gb|AES76451.1| Disease resistance-like protein GS5-3 [Medicago truncatula]
Length = 335
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 545 KLFNMIHFLFQSIKRSVITKEELIH-------KIISSHLQITDRREVEEQMNLMLELVPE 597
K+FN I +V+ K ++ K + + + +R E EE + +M ++VPE
Sbjct: 21 KMFNFHKVFLTLIHATVVAKTGILVVSLEPVPKSVEDSVGVPNRGEAEEHIEIMEKIVPE 80
Query: 598 WISEKLSSCGDLLVCINKMTCPESIR 623
W+ +K+ S D + C+ +S+R
Sbjct: 81 WLCKKVISSRDTMYCVKNALDLDSVR 106
>gi|454318|emb|CAA81761.1| cell division cycle protein [Schizosaccharomyces pombe]
Length = 444
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 10/124 (8%)
Query: 111 LAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPEVIQIKKV 170
L + F+++D ++ + PTF + K+ LT + HLAQ+ + PE I
Sbjct: 94 LEKVFNAVDICVKFHLSINTKPTFVLLENKVSGLTKISLKITHLAQILTVWPESFAITPC 153
Query: 171 LTFDEKTSCMKPDLHVTVNADAIECDGKSKCNSKNLNLRTVFRARLMDFLKDHPEGDEIP 230
T + +L NA+ E +S F+ RL +L +H EIP
Sbjct: 154 FTIHQGKRVATYELSYPRNANLPEAFSRS----------IEFKRRLEKWLLEHCSETEIP 203
Query: 231 EETL 234
+ L
Sbjct: 204 AQQL 207
>gi|359489926|ref|XP_002267629.2| PREDICTED: CDT1-like protein b-like [Vitis vinifera]
Length = 67
Score = 38.9 bits (89), Expect = 7.4, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 593 ELVPEWISEKLSSCGDLLVCINKMTCPESIRARL 626
+L+PEWI KL+ CGDLL I K + +S+ ARL
Sbjct: 21 KLIPEWIFRKLAPCGDLLYSIRKESNLDSVCARL 54
>gi|303284349|ref|XP_003061465.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456795|gb|EEH54095.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 509
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 104 LPAKYMQLAECFDSLDAVIRLLKLKCSSPTFTSICPKIECLTDRRFSLGHLAQLKFILPE 163
LP KY L + F +L + LL+ + + T ++C +E T RR +L L +++ +LP
Sbjct: 111 LPPKYEVLDDAFVALAQIGPLLRKRGQASTADNVCENVEATTRRRCTLKTLREVEGVLPG 170
Query: 164 VIQI 167
+ +
Sbjct: 171 TVGL 174
>gi|307202909|gb|EFN82129.1| Aminomethyltransferase, mitochondrial [Harpegnathos saltator]
Length = 454
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 14/119 (11%)
Query: 350 LEPCLRKISSIEETCSTAAISAVELSSKSTSKENCLTYCASPTRL-----SQSCPPVTPV 404
LE CL ++ +TCS A S V+ STS+ NCL A P+ +QSC +
Sbjct: 16 LEKCLDATGNVRDTCSIALRSRVKQKHASTSRLNCLIDSAVPSATANAIQTQSCQLSSST 75
Query: 405 KEIDPMESKVSYPIKVDSEQSTPAKLVSTPARLM-----IGTPALHQPKRCYMTPENVS 458
++ + Y + V+ + K+V+ L+ A HQ R Y + +V
Sbjct: 76 SGVNEVRKTCLYDLHVEKQ----GKVVNFAGWLLPVQYREAIAASHQHTRSYASLFDVG 130
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.126 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,239,020,238
Number of Sequences: 23463169
Number of extensions: 371399508
Number of successful extensions: 1105717
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 844
Number of HSP's that attempted gapping in prelim test: 1097859
Number of HSP's gapped (non-prelim): 8840
length of query: 630
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 481
effective length of database: 8,863,183,186
effective search space: 4263191112466
effective search space used: 4263191112466
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)