BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 006829
         (629 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P54802|ANAG_HUMAN Alpha-N-acetylglucosaminidase OS=Homo sapiens GN=NAGLU PE=1 SV=2
          Length = 743

 Score =  488 bits (1257), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 250/626 (39%), Positives = 382/626 (61%), Gaps = 50/626 (7%)

Query: 1   MALQGINLPLAFNGQEAIWQKVFMNFNVTMEDLNDFFSGPAFLAWARMGNLHGWGGPLAQ 60
           MAL GINL LA++GQEAIWQ+V++   +T  ++N+FF+GPAFLAW RMGNLH W GPL  
Sbjct: 157 MALNGINLALAWSGQEAIWQRVYLALGLTQAEINEFFTGPAFLAWGRMGNLHTWDGPLPP 216

Query: 61  NWLNQQLVLQKKIVSRMLELGMTPVLPSFAGNVPAALKKIFPSANITRLGDWNTVDRNPR 120
           +W  +QL LQ +++ +M   GMTPVLP+FAG+VP A+ ++FP  N+T++G W     N  
Sbjct: 217 SWHIKQLYLQHRVLDQMRSFGMTPVLPAFAGHVPEAVTRVFPQVNVTKMGSWGHF--NCS 274

Query: 121 WCCTYLLDPTDPLFVEIGEAFIKQQILEYGDVTDIYNCDTFNENTPPTNDTNYISSLGAA 180
           + C++LL P DP+F  IG  F+++ I E+G    IY  DTFNE  PP+++ +Y+++   A
Sbjct: 275 YSCSFLLAPEDPIFPIIGSLFLRELIKEFG-TDHIYGADTFNEMQPPSSEPSYLAAATTA 333

Query: 181 VYKAMSEGDKDAVWLMQGWLFYSDSAFWKPPQMKALLHSVPLGKMIVLDLFAEVKPIWRT 240
           VY+AM+  D +AVWL+QGWLF     FW P Q++A+L +VP G+++VLDLFAE +P++  
Sbjct: 334 VYEAMTAVDTEAVWLLQGWLFQHQPQFWGPAQIRAVLGAVPRGRLLVLDLFAESQPVYTR 393

Query: 241 SSQFYGAPYVWCMLHNFGGNIEIYGILDSIASGPVDARVSENSTMVGVGMCMEGIEQNPV 300
           ++ F G P++WCMLHNFGGN  ++G L+++  GP  AR+  NSTMVG GM  EGI QN V
Sbjct: 394 TASFQGQPFIWCMLHNFGGNHGLFGALEAVNGGPEAARLFPNSTMVGTGMAPEGISQNEV 453

Query: 301 VYELMSEMAFRNEKVQVL-EWLKTYAHRRYGKAVPEVEATWEILYHTVYNCT-DGIADHN 358
           VY LM+E+ +R + V  L  W+ ++A RRYG + P+  A W +L  +VYNC+ +    HN
Sbjct: 454 VYSLMAELGWRKDPVPDLAAWVTSFAARRYGVSHPDAGAAWRLLLRSVYNCSGEACRGHN 513

Query: 359 TDFIVKFPDWDPSLLSGSAISKRDQMHALHALPGPRRFLSEENSDMPQAHLWYSNQELIK 418
              +V+     PSL   ++I                               WY+  ++ +
Sbjct: 514 RSPLVR----RPSLQMNTSI-------------------------------WYNRSDVFE 538

Query: 419 GLKLFLNAGNALAGCATYRYDLVDITRQALSKLANQVYMDAVIAFQHKD-ASAFNIHSQK 477
             +L L +  +LA    +RYDL+D+TRQA+ +L +  Y +A  A+  K+ AS        
Sbjct: 539 AWRLLLTSAPSLATSPAFRYDLLDLTRQAVQELVSLYYEEARSAYLSKELASLLRAGGVL 598

Query: 478 FLQLIKDIDELLASNDNFLLGTWLESAKKLATNPSEMIQYEYNARTQVTMWYDTNITTQS 537
             +L+  +DE+LAS+  FLLG+WLE A+  A + +E   YE N+R Q+T+W       + 
Sbjct: 599 AYELLPALDEVLASDSRFLLGSWLEQARAAAVSEAEADFYEQNSRYQLTLW-----GPEG 653

Query: 538 KLHDYANKFWSGLLVDYYLPRASTYFDYMSKSLREKSEFQVDRWRQQWVFISISWQSNWK 597
            + DYANK  +GL+ +YY PR   + + +  S+ +   FQ  ++ +  VF     +  + 
Sbjct: 654 NILDYANKQLAGLVANYYTPRWRLFLEALVDSVAQGIPFQQHQFDKN-VF---QLEQAFV 709

Query: 598 TGTKNYPIRAKGDSIAIAKVLYDKYF 623
              + YP + +GD++ +AK ++ KY+
Sbjct: 710 LSKQRYPSQPRGDTVDLAKKIFLKYY 735


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.135    0.427 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 243,696,856
Number of Sequences: 539616
Number of extensions: 10334476
Number of successful extensions: 21574
Number of sequences better than 100.0: 4
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 21563
Number of HSP's gapped (non-prelim): 6
length of query: 629
length of database: 191,569,459
effective HSP length: 124
effective length of query: 505
effective length of database: 124,657,075
effective search space: 62951822875
effective search space used: 62951822875
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)