Query 006831
Match_columns 629
No_of_seqs 504 out of 2388
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 10:07:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006831.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006831hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2q13_A DCC-interacting protein 100.0 1.6E-39 5.4E-44 351.0 28.2 248 7-322 130-383 (385)
2 4h8s_A DCC-interacting protein 100.0 1.7E-39 5.7E-44 353.3 23.6 246 7-320 153-404 (407)
3 3jue_A Arfgap with coiled-coil 100.0 1.9E-40 6.7E-45 356.3 15.2 178 387-588 29-246 (368)
4 2iqj_A Stromal membrane-associ 100.0 8E-40 2.8E-44 301.0 7.0 120 388-534 12-131 (134)
5 2crr_A Stromal membrane-associ 100.0 1.8E-39 6E-44 301.2 6.9 118 389-533 15-132 (141)
6 2olm_A Nucleoporin-like protei 100.0 2E-38 7E-43 293.7 7.7 121 388-533 10-130 (140)
7 1dcq_A PYK2-associated protein 100.0 2.5E-36 8.4E-41 311.5 14.7 172 390-587 4-179 (278)
8 3lvq_E ARF-GAP with SH3 domain 100.0 1.2E-36 4E-41 338.1 12.8 167 390-586 10-180 (497)
9 2b0o_E UPLC1; arfgap, structur 100.0 6.9E-36 2.4E-40 311.7 13.2 168 390-587 29-200 (301)
10 3lju_X ARF-GAP with dual PH do 100.0 7.6E-34 2.6E-38 306.6 9.1 122 387-533 18-139 (386)
11 2owa_A Arfgap-like finger doma 100.0 3.8E-33 1.3E-37 257.1 5.6 109 391-527 24-132 (138)
12 2crw_A ARF GAP 3, ADP-ribosyla 100.0 3.1E-32 1E-36 253.7 4.4 89 390-479 16-104 (149)
13 3dwd_A ADP-ribosylation factor 100.0 4.3E-31 1.5E-35 243.7 8.0 87 389-477 24-110 (147)
14 2p57_A GTPase-activating prote 100.0 4E-30 1.4E-34 237.4 5.1 87 390-477 24-110 (144)
15 3sub_A ADP-ribosylation factor 100.0 5.1E-30 1.7E-34 239.7 4.9 88 390-479 8-96 (163)
16 3o47_A ADP-ribosylation factor 99.9 4.6E-26 1.6E-30 240.8 5.4 88 389-478 23-110 (329)
17 2q12_A DIP13 alpha, DCC-intera 99.8 1.5E-20 5.3E-25 192.7 17.1 124 7-130 130-255 (265)
18 2rlo_A Centaurin-gamma 1; spli 99.8 2.2E-20 7.4E-25 170.5 12.0 117 177-318 3-128 (128)
19 2da0_A 130-kDa phosphatidylino 99.8 2.1E-19 7.1E-24 160.6 14.0 101 174-319 6-106 (114)
20 1wi1_A Calcium-dependent activ 99.8 2.3E-19 7.8E-24 163.0 12.1 97 177-314 7-110 (126)
21 2rsg_A Collagen type IV alpha- 99.8 1.5E-18 5E-23 149.3 10.3 92 178-312 1-92 (94)
22 1v88_A Oxysterol binding prote 99.8 3.3E-18 1.1E-22 157.3 12.6 95 176-314 6-124 (130)
23 2dhk_A TBC1 domain family memb 99.8 6E-18 2E-22 152.3 13.1 102 176-319 6-109 (119)
24 2d9x_A Oxysterol binding prote 99.8 3E-18 1E-22 154.3 10.9 103 174-318 4-108 (120)
25 1wgq_A FYVE, rhogef and PH dom 99.7 1E-17 3.4E-22 147.9 13.4 96 177-314 7-103 (109)
26 2d9v_A Pleckstrin homology dom 99.7 1.3E-17 4.5E-22 152.6 14.5 108 174-314 4-114 (130)
27 1pls_A Pleckstrin homology dom 99.7 1.6E-17 5.6E-22 147.3 14.7 99 177-317 4-104 (113)
28 2dn6_A KIAA0640 protein; PH do 99.7 1.2E-17 4E-22 148.2 13.7 101 176-318 6-107 (115)
29 2p0d_A RHO GTPase-activating p 99.7 1E-17 3.4E-22 153.5 13.6 111 176-316 10-126 (129)
30 1v5p_A Pleckstrin homology dom 99.7 5.4E-18 1.8E-22 155.0 11.4 100 179-314 16-120 (126)
31 1x1f_A Signal-transducing adap 99.7 1.1E-17 3.8E-22 157.3 13.5 96 177-314 17-113 (149)
32 1u5d_A SKAP55, SRC kinase-asso 99.7 1.1E-17 3.7E-22 146.2 12.2 99 177-316 2-107 (108)
33 2cof_A Protein KIAA1914; PH do 99.7 5E-18 1.7E-22 149.7 9.5 95 176-314 6-101 (107)
34 1upq_A PEPP1; PH domain, phosp 99.7 2.5E-17 8.4E-22 148.0 14.0 99 176-315 9-110 (123)
35 3cxb_B Pleckstrin homology dom 99.7 1.4E-17 4.7E-22 148.9 11.8 96 180-316 2-103 (112)
36 2coc_A FYVE, rhogef and PH dom 99.7 1.4E-17 4.7E-22 149.3 11.7 94 178-313 8-105 (112)
37 1fao_A Dual adaptor of phospho 99.7 1.8E-17 6.1E-22 149.9 12.5 97 176-315 16-113 (126)
38 2i5f_A Pleckstrin; PH domain, 99.7 3E-17 1E-21 144.2 13.5 97 176-313 5-108 (109)
39 2dkp_A Pleckstrin homology dom 99.7 2.8E-17 9.5E-22 148.7 13.2 99 175-314 18-119 (128)
40 3aj4_A Pleckstrin homology dom 99.7 2.4E-17 8.2E-22 146.0 12.5 104 176-313 3-110 (112)
41 1wjm_A Beta-spectrin III; PH d 99.7 1.3E-17 4.5E-22 150.6 11.0 105 176-315 6-118 (123)
42 1v89_A Hypothetical protein KI 99.7 3.8E-17 1.3E-21 145.1 13.6 98 175-314 5-112 (118)
43 1v5u_A SBF1, SET binding facto 99.7 2.2E-17 7.4E-22 146.9 11.8 98 176-314 6-111 (117)
44 2yry_A Pleckstrin homology dom 99.7 6.9E-17 2.4E-21 144.8 15.1 98 176-314 20-120 (122)
45 1fgy_A GRP1; PH domain, signal 99.7 3.4E-17 1.1E-21 147.6 13.1 96 177-315 4-121 (127)
46 2cod_A Centaurin-delta 1; ARF 99.7 3.1E-17 1.1E-21 146.1 12.4 95 175-315 5-100 (115)
47 1unq_A RAC-alpha serine/threon 99.7 1.3E-17 4.4E-22 150.7 9.9 104 176-317 6-113 (125)
48 1x05_A Pleckstrin; PH domain, 99.7 3.4E-17 1.2E-21 148.6 12.7 100 175-315 15-121 (129)
49 1wg7_A Dedicator of cytokinesi 99.7 2.6E-17 8.9E-22 153.6 11.2 105 175-319 15-129 (150)
50 2d9y_A Pleckstrin homology dom 99.7 6.5E-17 2.2E-21 143.8 13.0 97 176-313 9-108 (117)
51 3rcp_A Pleckstrin homology dom 99.7 3.1E-17 1.1E-21 143.1 9.9 94 180-316 1-95 (103)
52 2lul_A Tyrosine-protein kinase 99.7 9.5E-17 3.2E-21 153.1 13.8 101 175-315 12-122 (164)
53 1x1g_A Pleckstrin 2; PH domain 99.7 3.1E-17 1E-21 148.8 9.8 100 176-315 16-125 (129)
54 1u5f_A SRC-associated adaptor 99.7 6.7E-17 2.3E-21 150.7 12.4 102 176-318 15-123 (148)
55 1eaz_A Tandem PH domain contai 99.7 7.8E-17 2.7E-21 145.0 10.7 99 176-316 12-113 (125)
56 1u5e_A SRC-associated adaptor 99.7 4.4E-17 1.5E-21 161.8 9.9 99 176-315 104-209 (211)
57 1btn_A Beta-spectrin; signal t 99.7 7.1E-17 2.4E-21 141.0 10.0 98 180-312 1-106 (106)
58 2w2x_D 1-phosphatidylinositol- 99.7 7E-17 2.4E-21 146.8 10.3 101 177-315 11-120 (124)
59 4a6h_A Phosphatidylinositol 4, 99.7 1.3E-16 4.4E-21 144.7 11.8 97 178-313 6-117 (120)
60 2y7b_A Actin-binding protein a 99.7 8E-17 2.7E-21 147.0 10.2 101 177-316 4-130 (134)
61 1btk_A Bruton'S tyrosine kinas 99.7 1.4E-16 4.8E-21 152.8 11.2 101 177-314 2-132 (169)
62 2j59_M RHO-GTPase activating p 99.7 2.3E-16 7.8E-21 150.2 11.3 99 178-314 3-111 (168)
63 1dro_A Beta-spectrin; cytoskel 99.7 1.1E-16 3.7E-21 144.7 7.9 106 177-315 7-120 (122)
64 1dyn_A Dynamin; signal transdu 99.6 7.3E-16 2.5E-20 138.8 12.3 95 177-312 11-115 (125)
65 3pp2_A RHO GTPase-activating p 99.6 1E-15 3.6E-20 139.1 11.9 110 176-314 6-123 (124)
66 3a8p_A T-lymphoma invasion and 99.6 2.2E-15 7.7E-20 154.3 13.4 107 176-317 9-127 (263)
67 3tfm_A Myosin X; split PH doma 99.6 4.2E-15 1.4E-19 149.1 11.6 98 175-315 55-156 (228)
68 3lju_X ARF-GAP with dual PH do 99.6 5.6E-15 1.9E-19 159.3 11.8 99 177-316 268-374 (386)
69 2r09_A Cytohesin-3; autoinhibi 99.6 9.9E-15 3.4E-19 155.3 12.5 95 177-314 212-328 (347)
70 1qqg_A IRS-1, insulin receptor 99.6 5.3E-15 1.8E-19 151.6 9.8 100 176-316 8-114 (264)
71 2dtc_A RAL guanine nucleotide 99.5 7.2E-14 2.5E-18 127.4 13.5 102 180-314 3-112 (126)
72 3tca_A Amyloid beta A4 precurs 99.5 1.7E-13 5.8E-18 141.1 11.7 102 173-313 163-275 (291)
73 2fjl_A 1-phosphatidylinositol- 99.4 1.7E-12 5.7E-17 121.0 12.3 125 179-315 2-149 (150)
74 2ys3_A UNC-112-related protein 99.3 2.2E-12 7.4E-17 118.1 9.7 97 177-312 8-110 (137)
75 3a8n_A TIAM-1, T-lymphoma inva 99.3 2.2E-12 7.5E-17 132.6 8.8 106 176-316 9-126 (279)
76 2rov_A RHO-associated protein 99.3 6E-12 2.1E-16 113.4 9.1 96 180-314 3-115 (117)
77 2d9w_A Docking protein 2; PH d 99.3 2.7E-11 9.1E-16 108.9 12.6 101 176-313 10-120 (127)
78 4ejn_A RAC-alpha serine/threon 99.2 1.5E-11 5.2E-16 133.9 9.0 101 177-316 5-110 (446)
79 3hk0_A Growth factor receptor- 99.1 8.4E-10 2.9E-14 112.2 13.1 101 175-314 129-240 (256)
80 4gmv_A RAS-associated and plec 99.0 6.6E-10 2.2E-14 114.3 11.1 100 176-314 156-266 (281)
81 1w1g_A HPDK1, 3-phosphoinositi 99.0 3.1E-09 1.1E-13 98.9 12.3 94 176-319 50-144 (151)
82 4f7h_A Fermitin family homolog 98.9 5.3E-09 1.8E-13 98.1 10.4 97 177-312 46-148 (173)
83 4bbk_A Kindlin-1, fermitin fam 98.9 6.9E-09 2.4E-13 96.3 10.0 97 177-312 25-127 (165)
84 3mpx_A FYVE, rhogef and PH dom 98.9 9.7E-08 3.3E-12 103.8 20.3 99 177-318 243-341 (434)
85 2d9z_A Protein kinase C, NU ty 98.8 5.6E-08 1.9E-12 87.6 12.1 104 175-314 5-123 (129)
86 2coa_A Protein kinase C, D2 ty 98.8 1.2E-08 4E-13 91.7 7.5 103 175-313 5-118 (125)
87 1zc3_B Exocyst complex protein 98.4 5.3E-06 1.8E-10 74.0 13.4 105 177-318 7-111 (113)
88 2vrw_B P95VAV, VAV1, proto-onc 98.3 0.0005 1.7E-08 73.9 28.6 100 177-317 233-338 (406)
89 3ky9_A Proto-oncogene VAV; cal 98.2 0.00014 4.8E-09 82.2 22.9 99 178-317 406-510 (587)
90 2z0v_A SH3-containing GRB2-lik 97.9 4.9E-05 1.7E-09 76.4 10.4 88 7-106 142-229 (240)
91 1v61_A RAC/CDC42 guanine nucle 97.9 6.2E-05 2.1E-09 68.9 10.0 56 260-315 71-127 (132)
92 1v5m_A SH2 and PH domain-conta 97.8 0.00017 5.8E-09 65.2 11.2 104 175-315 15-131 (136)
93 2dfk_A Collybistin II; DH doma 97.7 0.0055 1.9E-07 65.8 24.5 104 177-318 256-367 (402)
94 3qwm_A Iqsec1, IQ motif and SE 97.7 0.00032 1.1E-08 64.6 11.9 57 260-317 63-125 (140)
95 2pz1_A RHO guanine nucleotide 97.6 0.0054 1.9E-07 67.0 22.9 105 177-319 333-445 (466)
96 3p6a_A RHO guanine nucleotide 97.6 0.0016 5.3E-08 69.1 17.6 109 177-316 258-373 (377)
97 3tfm_A Myosin X; split PH doma 97.6 4.5E-05 1.5E-09 75.9 5.0 39 175-215 18-56 (228)
98 2lg1_A A-kinase anchor protein 97.6 0.00037 1.3E-08 67.3 11.0 103 176-317 69-175 (185)
99 3t06_A PDZ-rhogef, RHO guanine 97.6 0.0059 2E-07 65.6 21.7 112 177-316 294-410 (418)
100 1xcg_A PDZ-rhogef, RHO guanine 97.6 0.0029 9.9E-08 66.8 18.9 111 177-315 252-367 (368)
101 1zww_A SH3-containing GRB2-lik 97.5 0.00047 1.6E-08 69.8 11.2 88 7-106 158-245 (256)
102 1dbh_A Protein (human SOS 1); 97.5 0.0006 2E-08 71.8 12.0 103 177-314 246-349 (354)
103 3odw_A RHO guanine nucleotide 97.4 0.026 9E-07 62.9 24.2 113 177-317 411-527 (536)
104 1kz7_A Guanine nucleotide exch 97.2 0.033 1.1E-06 58.6 21.4 109 177-318 209-329 (353)
105 1mai_A Phospholipase C delta-1 97.1 0.0016 5.4E-08 59.2 9.0 38 279-316 84-123 (131)
106 1txd_A RHO guanine nucleotide 97.1 0.08 2.7E-06 56.1 23.7 116 177-319 256-374 (385)
107 3jzy_A Intersectin 2; C2 domai 97.1 7.5E-05 2.6E-09 82.3 0.0 115 177-319 252-367 (510)
108 3ml4_A Protein DOK-7; tyrosine 97.0 0.0014 4.7E-08 64.5 8.1 96 177-311 8-110 (224)
109 1nty_A Triple functional domai 96.9 0.0064 2.2E-07 62.8 13.0 103 177-316 202-310 (311)
110 2z0q_A XPLN, RHO guanine nucle 96.8 0.0038 1.3E-07 65.4 9.8 35 279-313 307-345 (346)
111 2rgn_B RHOA/RAC/CDC42 exchange 96.7 0.012 4E-07 62.0 12.8 105 177-315 206-319 (354)
112 2fic_A Bridging integrator 1; 96.5 0.012 4.2E-07 58.8 11.0 97 8-104 151-249 (251)
113 3ksy_A SOS-1, SON of sevenless 96.4 0.014 4.9E-07 70.2 12.4 105 177-317 443-549 (1049)
114 1foe_A T-lymphoma invasion and 96.4 0.61 2.1E-05 49.1 23.7 60 260-319 303-371 (377)
115 1uru_A Amphiphysin; endocytosi 96.2 0.033 1.1E-06 55.1 11.7 98 9-106 137-238 (244)
116 3v5w_A G-protein coupled recep 94.8 0.1 3.6E-06 59.7 10.7 94 177-314 558-652 (689)
117 3zvr_A Dynamin-1; hydrolase, D 94.6 2.3 7.9E-05 49.3 21.6 91 178-309 540-640 (772)
118 4gpm_A Engineered protein OR26 94.4 0.043 1.5E-06 51.2 5.5 46 540-588 3-48 (169)
119 4a3a_A Amphiphysin; structural 93.8 0.76 2.6E-05 45.8 13.6 94 12-106 141-237 (243)
120 1z87_A Alpha-1-syntrophin; pro 93.6 0.12 4.1E-06 52.4 7.2 52 262-314 207-262 (263)
121 4avm_A Bridging integrator 2; 93.4 0.78 2.7E-05 45.5 12.8 95 11-106 135-232 (237)
122 2adz_A Alpha-1-syntrophin; pro 93.1 0.18 6.1E-06 48.0 7.1 53 261-314 121-177 (178)
123 4g8k_A 2-5A-dependent ribonucl 92.7 0.077 2.6E-06 54.1 4.4 45 543-589 27-71 (337)
124 1fho_A UNC-89; pleckstrin homo 91.6 0.37 1.3E-05 42.9 6.9 100 177-315 9-113 (119)
125 3t8k_A Uncharacterized protein 91.3 0.17 5.6E-06 47.9 4.6 43 544-588 41-86 (186)
126 1n0q_A 3ANK, 3 ankyrin repeats 89.6 0.37 1.3E-05 39.2 4.7 41 545-588 6-46 (93)
127 2zgd_A 3 repeat synthetic anky 88.2 0.6 2.1E-05 39.4 5.2 44 542-588 25-68 (110)
128 4gpm_A Engineered protein OR26 87.6 0.52 1.8E-05 43.7 4.8 41 545-588 74-114 (169)
129 1s70_B 130 kDa myosin-binding 87.4 0.95 3.2E-05 44.7 6.9 43 543-588 42-84 (299)
130 1i4d_A Arfaptin 2, partner of 87.2 3.6 0.00012 40.5 10.7 89 8-96 109-201 (224)
131 1n0q_A 3ANK, 3 ankyrin repeats 87.0 0.7 2.4E-05 37.5 4.8 43 544-589 38-80 (93)
132 3aaa_C Myotrophin, protein V-1 86.9 0.79 2.7E-05 39.1 5.3 43 544-589 43-85 (123)
133 2jab_A H10-2-G3; HER2, darpin, 86.3 0.7 2.4E-05 40.3 4.7 43 544-589 50-92 (136)
134 3aaa_C Myotrophin, protein V-1 85.9 0.8 2.7E-05 39.1 4.8 40 544-586 76-115 (123)
135 2zgd_A 3 repeat synthetic anky 84.2 1.1 3.8E-05 37.7 4.8 43 544-589 60-102 (110)
136 2l6b_A NR1C; ankyrin, consensu 84.0 0.99 3.4E-05 37.9 4.4 41 545-588 13-53 (115)
137 4b93_B Ankyrin repeat domain-c 84.0 0.4 1.4E-05 47.8 2.1 41 545-588 90-130 (269)
138 2jab_A H10-2-G3; HER2, darpin, 83.0 1.2 4.1E-05 38.8 4.6 42 544-588 83-124 (136)
139 2y1l_E Darpin-8.4; hydrolase-i 82.9 1.2 4E-05 40.4 4.7 42 544-588 50-91 (169)
140 3ui2_A Signal recognition part 82.4 1.2 3.9E-05 43.5 4.8 41 545-588 115-155 (244)
141 1d9s_A Cyclin-dependent kinase 82.1 1 3.5E-05 39.3 3.8 40 546-588 50-89 (136)
142 3c5r_A BARD-1, BRCA1-associate 81.9 1.4 4.8E-05 38.2 4.7 42 544-588 46-87 (137)
143 2rfa_A Transient receptor pote 81.9 1.2 4.2E-05 42.1 4.7 42 545-588 7-48 (232)
144 1awc_B Protein (GA binding pro 81.7 1.5 5E-05 38.9 4.8 42 544-588 37-78 (153)
145 1sw6_A Regulatory protein SWI6 81.4 0.97 3.3E-05 46.1 4.0 41 544-587 286-326 (327)
146 3hra_A Ankyrin repeat family p 81.4 1.3 4.6E-05 40.7 4.6 43 544-589 42-84 (201)
147 1bd8_A P19INK4D CDK4/6 inhibit 81.2 1.6 5.4E-05 38.6 4.8 41 545-588 72-112 (156)
148 2l6b_A NR1C; ankyrin, consensu 81.2 1.3 4.6E-05 37.1 4.1 41 545-588 46-86 (115)
149 3deo_A Signal recognition part 80.7 1.6 5.4E-05 40.2 4.8 41 545-588 114-154 (183)
150 1ycs_B 53BP2, P53BP2; ankyrin 80.6 1.2 4.1E-05 43.0 4.1 43 544-589 73-115 (239)
151 3twr_A Tankyrase-2; ankyrin re 80.6 1.6 5.6E-05 39.0 4.7 41 545-588 79-119 (165)
152 3ehr_A Osteoclast-stimulating 78.9 1.8 6.2E-05 40.9 4.7 43 544-589 109-152 (222)
153 3utm_A Tankyrase-1; tankyrase, 78.8 1.4 4.9E-05 44.0 4.2 43 544-589 61-103 (351)
154 1bi7_B P16INK4A, MTS1, multipl 78.8 1.7 5.8E-05 38.7 4.2 43 544-589 81-123 (156)
155 3jxi_A Vanilloid receptor-rela 78.7 1.5 5.1E-05 42.4 4.1 44 544-588 96-151 (260)
156 1ihb_A P18-INK4C(INK6), cyclin 78.4 2.1 7.1E-05 38.0 4.7 41 545-588 74-114 (162)
157 4g8k_A 2-5A-dependent ribonucl 78.4 1.7 5.8E-05 43.9 4.6 42 545-588 243-284 (337)
158 3f6q_A Integrin-linked protein 78.3 2 6.8E-05 39.1 4.6 43 544-589 42-84 (179)
159 4b93_B Ankyrin repeat domain-c 78.1 1.6 5.3E-05 43.4 4.1 40 544-586 188-227 (269)
160 4hbd_A KN motif and ankyrin re 77.8 2 6.8E-05 42.6 4.8 42 544-588 186-227 (276)
161 3c5r_A BARD-1, BRCA1-associate 77.7 1.9 6.4E-05 37.4 4.1 43 543-588 78-120 (137)
162 3v31_A Ankyrin repeat family A 77.7 1.9 6.6E-05 38.6 4.3 43 544-589 39-81 (167)
163 2vge_A RELA-associated inhibit 77.6 2.7 9.2E-05 40.5 5.6 42 544-588 57-98 (229)
164 1d9s_A Cyclin-dependent kinase 77.4 2.4 8.2E-05 36.8 4.7 43 544-589 81-123 (136)
165 3hra_A Ankyrin repeat family p 76.9 2.5 8.4E-05 38.9 4.9 43 545-589 144-190 (201)
166 1ycs_B 53BP2, P53BP2; ankyrin 76.9 1.9 6.4E-05 41.6 4.2 43 544-588 106-148 (239)
167 1dcq_A PYK2-associated protein 76.8 2.2 7.5E-05 42.7 4.8 42 544-588 208-249 (278)
168 2vge_A RELA-associated inhibit 76.3 2.4 8.1E-05 40.9 4.7 44 544-589 90-135 (229)
169 3deo_A Signal recognition part 76.2 2 6.8E-05 39.5 4.0 44 544-589 79-122 (183)
170 2etb_A Transient receptor pote 76.2 2.4 8.1E-05 40.9 4.7 42 544-588 139-183 (256)
171 3t8k_A Uncharacterized protein 76.0 1.7 5.8E-05 40.8 3.5 30 555-586 94-124 (186)
172 2xai_A ASB-9, ankyrin repeat a 76.0 2.4 8.1E-05 41.3 4.7 43 544-589 39-81 (261)
173 1sw6_A Regulatory protein SWI6 76.0 2.2 7.5E-05 43.4 4.6 42 544-588 134-175 (327)
174 3f6q_A Integrin-linked protein 76.0 2.6 9.1E-05 38.2 4.8 43 544-589 75-117 (179)
175 2rfa_A Transient receptor pote 75.9 2.2 7.6E-05 40.3 4.4 43 544-589 124-166 (232)
176 3utm_A Tankyrase-1; tankyrase, 75.9 2.3 8E-05 42.4 4.8 42 544-588 250-291 (351)
177 1ihb_A P18-INK4C(INK6), cyclin 75.6 1.6 5.5E-05 38.7 3.1 40 545-588 42-81 (162)
178 1wdy_A 2-5A-dependent ribonucl 75.6 2.6 9E-05 40.6 4.9 42 544-588 42-83 (285)
179 3twr_A Tankyrase-2; ankyrin re 75.0 3 0.0001 37.2 4.8 42 544-588 45-86 (165)
180 1awc_B Protein (GA binding pro 74.9 2.9 0.0001 36.8 4.7 43 544-589 70-112 (153)
181 2y1l_E Darpin-8.4; hydrolase-i 74.4 3.1 0.00011 37.4 4.8 43 544-589 83-125 (169)
182 3jxi_A Vanilloid receptor-rela 74.2 2.8 9.7E-05 40.4 4.7 42 544-588 143-187 (260)
183 3v30_A DNA-binding protein rfx 73.8 2.8 9.7E-05 37.6 4.3 42 544-588 72-113 (172)
184 2pnn_A Transient receptor pote 73.8 2.9 9.9E-05 40.8 4.7 42 544-588 151-195 (273)
185 1oy3_D Transcription factor in 73.7 2.7 9.2E-05 40.7 4.4 42 544-588 195-236 (282)
186 2etb_A Transient receptor pote 73.6 3.1 0.00011 40.0 4.9 44 544-588 93-147 (256)
187 2pnn_A Transient receptor pote 73.6 2.9 9.8E-05 40.8 4.6 44 544-588 104-159 (273)
188 2rfm_A Putative ankyrin repeat 73.6 3.2 0.00011 38.1 4.7 41 545-588 105-145 (192)
189 3v31_A Ankyrin repeat family A 73.5 3.4 0.00012 36.9 4.8 43 544-589 72-114 (167)
190 3ljn_A Hypothetical protein; a 73.3 2.7 9.4E-05 42.9 4.5 43 543-588 22-64 (364)
191 1s70_B 130 kDa myosin-binding 72.8 3.1 0.00011 40.9 4.7 42 544-588 202-243 (299)
192 1oy3_D Transcription factor in 72.7 3 0.0001 40.3 4.5 42 544-588 228-269 (282)
193 3v30_A DNA-binding protein rfx 72.6 3.7 0.00013 36.8 4.8 42 544-588 105-146 (172)
194 1n0r_A 4ANK, 4 ankyrin repeats 72.5 4 0.00014 34.0 4.7 41 545-588 39-79 (126)
195 1bi7_B P16INK4A, MTS1, multipl 72.4 2.6 8.9E-05 37.5 3.6 29 558-588 60-89 (156)
196 3ui2_A Signal recognition part 72.3 2.2 7.6E-05 41.4 3.4 44 544-589 80-123 (244)
197 3ehr_A Osteoclast-stimulating 72.2 2.9 9.9E-05 39.4 4.1 42 544-588 143-184 (222)
198 1n0r_A 4ANK, 4 ankyrin repeats 72.1 3.5 0.00012 34.4 4.2 42 544-588 5-46 (126)
199 1gnf_A Transcription factor GA 72.0 1.2 4.2E-05 32.9 1.1 37 402-438 3-40 (46)
200 2q12_A DIP13 alpha, DCC-intera 71.4 42 0.0014 33.1 12.7 58 38-95 121-183 (265)
201 3d9h_A CDNA FLJ77766, highly s 70.2 3.6 0.00012 40.8 4.5 41 545-588 96-136 (285)
202 2rfm_A Putative ankyrin repeat 70.2 7.1 0.00024 35.6 6.3 42 544-588 71-112 (192)
203 1yyh_A HN1;, notch 1, ankyrin 69.6 4.1 0.00014 39.3 4.7 41 545-588 161-201 (253)
204 1u5k_A Hypothetical protein; O 69.5 4.3 0.00015 40.0 4.8 51 401-469 148-198 (244)
205 1ikn_D Protein (I-kappa-B-alph 69.5 3.9 0.00013 38.8 4.4 41 545-588 155-195 (236)
206 3jue_A Arfgap with coiled-coil 69.4 4 0.00014 42.9 4.8 42 544-588 271-312 (368)
207 3kea_A K1L; tropism, ANK repea 69.1 2.9 0.0001 41.5 3.5 43 544-589 65-107 (285)
208 3eu9_A Huntingtin-interacting 69.0 4.7 0.00016 37.7 4.8 43 544-588 45-87 (240)
209 1k1a_A B-cell lymphoma 3-encod 68.9 4.6 0.00016 38.0 4.7 42 544-588 153-194 (241)
210 2b0o_E UPLC1; arfgap, structur 68.4 4.5 0.00015 40.9 4.8 42 544-588 229-270 (301)
211 2f8y_A Notch homolog 1, transl 68.0 5 0.00017 37.4 4.8 41 545-588 129-169 (223)
212 1yyh_A HN1;, notch 1, ankyrin 66.7 5.3 0.00018 38.5 4.8 41 545-588 61-101 (253)
213 3caz_A BAR protein; thermo-aci 66.6 42 0.0014 31.9 10.5 94 8-101 122-216 (294)
214 2f8y_A Notch homolog 1, transl 66.3 5.7 0.0002 37.0 4.8 41 545-588 29-69 (223)
215 2vut_I AREA, nitrogen regulato 66.3 2 6.8E-05 31.3 1.1 34 404-437 2-36 (43)
216 2dzn_A Probable 26S proteasome 65.9 5.9 0.0002 36.9 4.8 43 544-589 143-186 (228)
217 3ljn_A Hypothetical protein; a 65.6 4.3 0.00015 41.3 4.1 41 545-588 215-255 (364)
218 3lvq_E ARF-GAP with SH3 domain 65.0 4.7 0.00016 43.7 4.4 41 545-588 211-251 (497)
219 2xai_A ASB-9, ankyrin repeat a 65.0 5.8 0.0002 38.5 4.7 42 544-589 72-113 (261)
220 3b7b_A Euchromatic histone-lys 64.8 6 0.00021 37.2 4.7 42 544-588 47-88 (237)
221 3aji_A 26S proteasome non-ATPa 64.6 6.3 0.00021 36.9 4.7 41 545-588 143-183 (231)
222 3aji_A 26S proteasome non-ATPa 64.3 6.4 0.00022 36.9 4.7 42 544-588 76-117 (231)
223 1wdy_A 2-5A-dependent ribonucl 64.1 6.5 0.00022 37.7 4.8 43 544-588 222-264 (285)
224 3dfx_A Trans-acting T-cell-spe 63.9 1.7 5.7E-05 34.3 0.4 37 402-438 6-43 (63)
225 1ikn_D Protein (I-kappa-B-alph 63.3 5.6 0.00019 37.7 4.1 43 544-588 120-162 (236)
226 3kea_A K1L; tropism, ANK repea 63.0 4.5 0.00015 40.1 3.5 43 544-589 98-141 (285)
227 3b7b_A Euchromatic histone-lys 62.7 7 0.00024 36.8 4.7 41 545-588 148-188 (237)
228 4gat_A Nitrogen regulatory pro 62.7 2.7 9.3E-05 33.4 1.4 37 402-438 8-45 (66)
229 2zkm_X 1-phosphatidylinositol- 61.4 13 0.00044 43.4 7.3 38 280-317 96-138 (799)
230 4hbd_A KN motif and ankyrin re 61.3 6.9 0.00024 38.6 4.5 43 544-589 219-262 (276)
231 1k1a_A B-cell lymphoma 3-encod 60.9 8.6 0.0003 36.1 5.0 43 544-589 49-91 (241)
232 3eu9_A Huntingtin-interacting 60.6 6.9 0.00024 36.5 4.2 42 544-588 180-221 (240)
233 2dzn_A Probable 26S proteasome 60.2 8.6 0.00029 35.8 4.8 42 544-588 75-118 (228)
234 2fo1_E LIN-12 protein; beta-ba 60.0 7.7 0.00026 40.0 4.8 42 545-588 283-324 (373)
235 2q13_A DCC-interacting protein 56.3 1.1E+02 0.0038 31.7 13.2 97 41-137 124-244 (385)
236 3d9h_A CDNA FLJ77766, highly s 55.6 11 0.00037 37.2 4.8 42 544-589 128-169 (285)
237 2fo1_E LIN-12 protein; beta-ba 53.0 12 0.0004 38.6 4.7 42 544-588 316-357 (373)
238 1n11_A Ankyrin; clathrin, BAND 53.0 11 0.00039 39.2 4.7 44 543-589 49-92 (437)
239 1bd8_A P19INK4D CDK4/6 inhibit 52.9 14 0.00048 32.2 4.6 38 549-589 43-80 (156)
240 3ohm_B 1-phosphatidylinositol- 52.2 38 0.0013 39.8 9.3 38 280-317 100-142 (885)
241 4hc9_A Trans-acting T-cell-spe 50.6 4.6 0.00016 35.6 0.9 36 403-438 5-41 (115)
242 1n11_A Ankyrin; clathrin, BAND 50.1 14 0.00048 38.5 4.8 42 544-588 347-388 (437)
243 2kae_A GATA-type transcription 50.0 2.9 0.0001 33.7 -0.4 36 403-439 8-46 (71)
244 3qr0_A Phospholipase C-beta (P 49.8 39 0.0013 39.4 8.8 38 280-317 103-145 (816)
245 3swy_A Cyclic nucleotide-gated 44.3 61 0.0021 23.8 5.9 40 92-131 5-44 (46)
246 4akv_A Sorting nexin-33; trans 43.0 55 0.0019 34.5 8.1 59 41-99 323-381 (386)
247 3dyt_A Sorting nexin-9; 3-heli 42.0 54 0.0018 34.2 7.8 58 41-98 303-360 (366)
248 2ykt_A Brain-specific angiogen 39.9 2.2E+02 0.0077 28.1 11.5 37 60-96 187-224 (253)
249 1naf_A ADP-ribosylation factor 38.4 1.7E+02 0.0059 26.9 9.7 92 23-115 21-114 (158)
250 1d4u_A Nucleotide excision rep 35.9 8.6 0.0003 33.7 0.3 32 402-433 4-36 (111)
251 1oxz_A ADP-ribosylation factor 35.4 2.1E+02 0.0071 27.1 9.9 88 22-115 36-130 (186)
252 4glq_A Methyl-accepting chemot 35.0 23 0.00078 32.5 3.2 41 421-479 119-159 (171)
253 1dl6_A Transcription factor II 35.0 19 0.00065 27.6 2.1 28 404-432 12-39 (58)
254 3swf_A CGMP-gated cation chann 34.2 1E+02 0.0035 24.8 6.3 44 92-135 7-50 (74)
255 4hc9_A Trans-acting T-cell-spe 30.4 17 0.00057 31.9 1.3 38 402-439 58-96 (115)
256 1tjl_A DNAK suppressor protein 30.4 9 0.00031 35.3 -0.5 33 401-433 109-142 (151)
257 2xi5_A RNA polymerase L, L-pro 28.2 51 0.0017 30.9 4.1 62 14-81 4-65 (184)
258 3mq9_A Bone marrow stromal ant 27.4 2.8E+02 0.0096 29.3 10.7 22 113-134 446-467 (471)
259 3g9m_A Glucocorticoid receptor 26.3 18 0.00061 30.2 0.7 30 402-434 1-30 (90)
260 3a98_B Engulfment and cell mot 26.3 4.3E+02 0.015 25.1 10.7 31 281-311 116-147 (203)
261 2uzg_A Ubiquitin carboxyl-term 25.1 40 0.0014 28.5 2.7 28 401-428 23-53 (97)
262 3c5k_A HD6, histone deacetylas 23.7 41 0.0014 29.1 2.5 26 402-427 23-48 (109)
263 3ulb_A Target of rapamycin com 21.9 1.6E+02 0.0054 26.0 5.9 36 280-315 74-115 (121)
264 1r4i_A Androgen receptor; AR, 21.6 24 0.00081 30.5 0.5 33 400-435 4-36 (105)
265 1pft_A TFIIB, PFTFIIBN; N-term 21.4 38 0.0013 24.7 1.6 28 404-432 6-33 (50)
266 4fye_A SIDF, inhibitor of grow 21.4 7E+02 0.024 25.9 11.6 91 36-134 488-580 (761)
267 1hcq_A Protein (estrogen recep 21.1 29 0.00098 28.7 0.9 31 402-435 3-33 (84)
268 3k1f_M Transcription initiatio 20.7 62 0.0021 30.6 3.2 28 405-432 23-51 (197)
269 2v0o_A FCHO2, FCH domain only 20.6 5.6E+02 0.019 24.5 11.6 55 9-69 137-191 (276)
270 3j21_d 50S ribosomal protein L 20.6 26 0.0009 29.4 0.6 31 399-430 29-76 (89)
No 1
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=100.00 E-value=1.6e-39 Score=350.96 Aligned_cols=248 Identities=27% Similarity=0.383 Sum_probs=195.9
Q ss_pred hhhhhhHhHHHHHHHHHHhcccCCCCcchH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 006831 7 TVAFNGDGNFVLQAREKFLSLRKSTRMDVA-VVIEEDLHNARTSFEQARFNLVGALSNVEAKKRFELLEAVGGTMDAHLR 85 (629)
Q Consensus 7 ~~~Fe~~q~kyd~~~~ky~slsk~k~~~~~-~E~a~eL~~aRk~f~~asldyv~~l~~vq~kk~~e~le~l~~~~~a~~~ 85 (629)
-++||+++.+||++++||++++|+|+++.. .|++++|+++|+.|++++||||.+|+.++.++++++|+.++.||+++.+
T Consensus 130 kk~fek~~~~yd~al~k~~~~~k~k~~e~~~~ea~~~l~~~rk~f~~~~ldy~~~l~~l~~rk~~e~le~l~~~~~a~~~ 209 (385)
T 2q13_A 130 KEVFQIASNDHDAAINRYSRLSKKRENDKVKYEVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQIS 209 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999988755 6777999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHhh-hhchHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCchHHH
Q 006831 86 FFKQGYELL-HQMEPFINQVLAYAQQSRECSDYEQASLHQRMQDYLKQIDRESRQCLNGSLGSPSGDNVKPFPRNSNKLI 164 (629)
Q Consensus 86 ff~~g~e~~-~~l~p~~~~l~~~~q~~r~~~~~~~~~L~~~m~~~k~qi~~~~~~s~~~~~~~ps~~~~~~~~~~~~k~~ 164 (629)
||++|++++ ++++||+++|..++++.|.+++++++.+.+.++.++. ....+ +.|+++..
T Consensus 210 ff~~g~~~~~~~~~~~~~~l~~~l~~~r~~~~~~~~~~~~~~~~l~~----~~~~~-----~~~~~~~~----------- 269 (385)
T 2q13_A 210 FFKMGSENLNEQLEEFLANIGTSVQNVRREMDSDIETMQQTIEDLEV----ASDPL-----YVPDPDPT----------- 269 (385)
T ss_dssp HHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHGGG-----SSSSCCTT-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCC-----CCCCCccc-----------
Confidence 999999998 5999999999999999999999998888877765442 11111 11221110
Q ss_pred HHHHhhhccCCcceeEeeeeeeccCC--CCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCcccccccc
Q 006831 165 EAAMQSAVKGKVQTIKQGYLSKRSSN--LRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSR 242 (629)
Q Consensus 165 ~~~~~~~~~~~~~~iKqGyL~Krs~~--~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~ 242 (629)
+ .......++|+|||+|+++. .++.|+||||||+ ++.|+||++. +.
T Consensus 270 ----~-~~~~~~~~~k~G~L~K~~~~~~~~~~WkkRwfvL~-~~~L~y~k~~-~~------------------------- 317 (385)
T 2q13_A 270 ----K-FPVNRNLTRKAGYLNARNKTGLVSSTWDRQFYFTQ-GGNLMSQARG-DV------------------------- 317 (385)
T ss_dssp ----T-SCCCCCCSCCEEEEEEC--------CCEEEEEEEE-TTEEEEECSS-CS-------------------------
T ss_pred ----c-cccCCCCccEEEEEEEecCCCCCcCCceeEEEEEE-CCEEEEecCC-Cc-------------------------
Confidence 0 00112367899999999876 3457999999998 5667787763 21
Q ss_pred ccccccCCCccccccceeeEeecccceeecCCCCCCCcceEEEeeCC--cEEEEEeCCHHHHHHHHHHHHHHHHHHhccC
Q 006831 243 WLSSHYHGGVHDEKSVARHTVNLLTSTIKPDADQSDLRFCFRIISPT--KVYTLQAENTLDQMDWIEKINGVIASLLSFQ 320 (629)
Q Consensus 243 ~~~~~~~g~v~d~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~--rty~LqAeSe~E~~~WI~aI~~aI~~~l~~~ 320 (629)
.+.+.|+|..|++.+. +..+++|||+|++++ ++|+|||+|++|+++||.+|+.+|..++...
T Consensus 318 ---------------~~~~~i~l~~~~v~~~-~~~~r~~~F~i~t~~~~~~~~l~A~s~~e~~~Wi~ai~~~~~~~~~~~ 381 (385)
T 2q13_A 318 ---------------AGGLAMDIDNCSVMAV-DCEDRRYCFQITSFDGKKSSILQAESKKDHEEWICTINNISKQIYLSE 381 (385)
T ss_dssp ---------------SCEEEEECTTCEEEEE-CCTTCSSEEEEECTTSCBCCCEECSSHHHHHHHHHHHHHHHTTCC---
T ss_pred ---------------CCCceEEccceEEEec-cccCCCceEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHhhcccc
Confidence 1235688888988774 446889999999999 9999999999999999999999998766544
Q ss_pred Cc
Q 006831 321 TP 322 (629)
Q Consensus 321 ~~ 322 (629)
.|
T Consensus 382 ~~ 383 (385)
T 2q13_A 382 NP 383 (385)
T ss_dssp --
T ss_pred CC
Confidence 33
No 2
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=353.25 Aligned_cols=246 Identities=22% Similarity=0.350 Sum_probs=196.4
Q ss_pred hhhhhhHhHHHHHHHHHHhcccCCCCcchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 006831 7 TVAFNGDGNFVLQAREKFLSLRKSTRMDVAV-VIEEDLHNARTSFEQARFNLVGALSNVEAKKRFELLEAVGGTMDAHLR 85 (629)
Q Consensus 7 ~~~Fe~~q~kyd~~~~ky~slsk~k~~~~~~-E~a~eL~~aRk~f~~asldyv~~l~~vq~kk~~e~le~l~~~~~a~~~ 85 (629)
-++||+++++||++++||++++|+|+++.++ |++++|+++|+.|++++||||.+|+.++.++++++|+.+++||+++.+
T Consensus 153 kK~Fek~~~~Yd~~l~Ky~~~~k~k~~~~~~~e~~~~l~~~Rk~f~~asldyv~~l~~lq~rk~~e~le~l~~~~~a~~~ 232 (407)
T 4h8s_A 153 KDLFGLASNEHDLSMAKYSRLPKKKENEKVKTEVGKEVAAARRKQHLSSLQYYCALNALQYRKQMAMMEPMIGFAHGQIN 232 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999888774 789999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHhh-hhchHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCchHHH
Q 006831 86 FFKQGYELL-HQMEPFINQVLAYAQQSRECSDYEQASLHQRMQDYLKQIDRESRQCLNGSLGSPSGDNVKPFPRNSNKLI 164 (629)
Q Consensus 86 ff~~g~e~~-~~l~p~~~~l~~~~q~~r~~~~~~~~~L~~~m~~~k~qi~~~~~~s~~~~~~~ps~~~~~~~~~~~~k~~ 164 (629)
||++|++++ .+++||+.++...+++.+...+.+++.+...++.+. ........|+.+...+
T Consensus 233 ~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~--------- 294 (407)
T 4h8s_A 233 FFKKGAEMFSKRMDSFLSSVADMVQSIQVELEAEAEKMRVSQQELL---------SVDESVYTPDSDVAAP--------- 294 (407)
T ss_dssp HHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------CSCTTTTCTTSCSSSC---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------cccccccCCCCCcccc---------
Confidence 999999998 579999999999999999988887776655544322 1111112222221111
Q ss_pred HHHHhhhccCCcceeEeeeeeeccCC--CCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCcccccccc
Q 006831 165 EAAMQSAVKGKVQTIKQGYLSKRSSN--LRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSR 242 (629)
Q Consensus 165 ~~~~~~~~~~~~~~iKqGyL~Krs~~--~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~ 242 (629)
......+.|+|||+||++. .++.|+||||||+ +|.|+||+.....
T Consensus 295 -------~~~~~~~~k~G~L~k~~~~g~~~~~W~rrwfvl~-~~~l~y~~~~~~~------------------------- 341 (407)
T 4h8s_A 295 -------QINRNLIQKAGYLNLRNKTGLVTTTWERLYFFTQ-GGNLMCQPRGAVA------------------------- 341 (407)
T ss_dssp -------CCCCSCSCCEEEEEEEEECSSSCEEEEEEEEEEC-SSCEECCCTTCSS-------------------------
T ss_pred -------cccCCcceeeceeeeeccCCCCCCCceEEEEEEE-CCEEEEEeCCCCC-------------------------
Confidence 1123467899999998543 4578999999998 5778888654331
Q ss_pred ccccccCCCccccccceeeEeecccceeecCCCCCCCcceEEEeeCC--cEEEEEeCCHHHHHHHHHHHHHHHHHHhccC
Q 006831 243 WLSSHYHGGVHDEKSVARHTVNLLTSTIKPDADQSDLRFCFRIISPT--KVYTLQAENTLDQMDWIEKINGVIASLLSFQ 320 (629)
Q Consensus 243 ~~~~~~~g~v~d~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~--rty~LqAeSe~E~~~WI~aI~~aI~~~l~~~ 320 (629)
+...++|..|+|++. +..+|+|||+|++|+ ++|+|||+|++|+++||.+|+++|+.++...
T Consensus 342 ----------------~~~~~~l~~~~v~~~-~~~~r~~cF~i~~~~~~~~~~l~A~s~~e~~~Wi~ai~~a~~~~~~~~ 404 (407)
T 4h8s_A 342 ----------------GGLIQDLDNCSVMAV-DCEDRRYCFQITTPNGKSGIILQAESRKENEEWICAINNISRQIYLTD 404 (407)
T ss_dssp ----------------CCCCBCSSCCEEEEE-CCTTCSSEEEEECTTSSCCEEEECSSSHHHHHHHHHHHHHHSCC----
T ss_pred ----------------CCeEEECCceEEEEC-CCCCCCceEEEEecCCCceEEEEcCCHHHHHHHHHHHHHHHHHhhccc
Confidence 113456778998874 567899999999987 6899999999999999999999998776543
No 3
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=100.00 E-value=1.9e-40 Score=356.28 Aligned_cols=178 Identities=38% Similarity=0.626 Sum_probs=153.5
Q ss_pred hccccchHHHHHhccCCCCCCCCCCCCCCceecccceeEeccccccccccCcccceeeEeecCCCcCChhHHHHHhhcCh
Q 006831 387 IVKNEKPIDLLRRVYGNNKCADCGASEPDWASLNLGVLICIQCSGVHRNLGVHISKVRSLTLDVKVWEPSVLNLFQSLGN 466 (629)
Q Consensus 387 ~~~~~~~~~~l~~~p~N~~CaDCg~~~p~w~s~n~Gv~lC~~CsgvHR~LG~hiSkVrSl~lD~~~w~~~~l~~~~~~GN 466 (629)
..+.++.++.|++.|+|+.|||||+++|+|||+|+|||||++||||||+||+||||||||+|| .|++++|++|+.+||
T Consensus 29 ~~~~~~~~~~~~~~~~n~~c~dc~~~~p~w~s~~~g~~~c~~c~~~hr~lg~~~s~v~s~~~d--~w~~~~~~~~~~~gn 106 (368)
T 3jue_A 29 PGGVGHVVAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLD--SWEPELVKLMCELGN 106 (368)
T ss_dssp ---CCCHHHHHHTSTTTTBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTS--CCCHHHHHHHHHSCH
T ss_pred hhHHHHHHHHHHcCCCcCcCCCCCCCCCCeEEecCCeEEcHhHHHHHhccCCCcCeeEEeecc--cccHHHHHHHHHHcc
Confidence 345789999999999999999999999999999999999999999999999999999999999 799999999999999
Q ss_pred hHHHHHHHhhhccCCCCCccccccCccccccccccccCCCCCCCCHHHHHHHHHHHhccCcccccCCCCcc---------
Q 006831 467 IYANSVWEELLRIGNNSLTDERHMGFSRTDKQKRFIVRKPNPDDSISVKEQYIHAKYAEKIFVHKRKDHHH--------- 537 (629)
Q Consensus 467 ~~~N~i~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kP~~~~~~~~re~fI~~KY~~k~f~~~~~~~~~--------- 537 (629)
..+|.|||+.+++.. ..||.|+++...|++||++||++|+|+.+.+....
T Consensus 107 ~~~n~~~e~~~~~~~---------------------~~kp~~~~~~~~re~fIr~KY~~k~f~~~l~~~~~~~~~~~~~r 165 (368)
T 3jue_A 107 VIINQIYEARVEAMA---------------------VKKPGPSCSRQEKEAWIHAKYVEKKFLTKLPEIRGRRGGRGRPR 165 (368)
T ss_dssp HHHHHHHTTTTTTTT---------------------CCCCCTTSCHHHHHHHHHHHHTSCTTCCSCC-------------
T ss_pred HHHHHHHHhhccccc---------------------CcCCCCCCCHHHHHHHHHHHHHhhcccccchhhhhccccccCcc
Confidence 999999999998631 46999999999999999999999999988542110
Q ss_pred -------------------------hhh-----HHHHHHHHHhc-CCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhh
Q 006831 538 -------------------------LLS-----VAQQLWESVRD-NDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATV 586 (629)
Q Consensus 538 -------------------------~~~-----~~~~l~~av~~-~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~ 586 (629)
... ....|+.|+.. +++..+..+| ..|+|||...+...+.||||+|+.
T Consensus 166 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~L~~Aa~~~g~~~~v~~LL-~~Gadvn~~~~~~~g~TpLh~Aa~ 244 (368)
T 3jue_A 166 GQPPVPPKPSIRPRPGSLRSKPEPPSEDLGSLHPGALLFRASGHPPSLPTMADAL-AHGADVNWVNGGQDNATPLIQATA 244 (368)
T ss_dssp -------------------------------CCHHHHHHHHTSSSCCHHHHHHHH-HTTCCTTCCCTTTTCCCHHHHHHH
T ss_pred cCCCCCCCcccCCCCccccccccccccccccCCCCcHHHHHHHccCCHHHHHHHH-HcCCCCCccccccCCCCHHHHHHH
Confidence 011 13478899999 9998877555 789999998765678999999998
Q ss_pred hh
Q 006831 587 ME 588 (629)
Q Consensus 587 ~~ 588 (629)
.+
T Consensus 245 ~g 246 (368)
T 3jue_A 245 AN 246 (368)
T ss_dssp TT
T ss_pred CC
Confidence 77
No 4
>2iqj_A Stromal membrane-associated protein 1-like; zinc, structural genomics, structural genomics consortium, SGC, protein transport; 1.90A {Homo sapiens}
Probab=100.00 E-value=8e-40 Score=301.00 Aligned_cols=120 Identities=39% Similarity=0.717 Sum_probs=109.1
Q ss_pred ccccchHHHHHhccCCCCCCCCCCCCCCceecccceeEeccccccccccCcccceeeEeecCCCcCChhHHHHHhhcChh
Q 006831 388 VKNEKPIDLLRRVYGNNKCADCGASEPDWASLNLGVLICIQCSGVHRNLGVHISKVRSLTLDVKVWEPSVLNLFQSLGNI 467 (629)
Q Consensus 388 ~~~~~~~~~l~~~p~N~~CaDCg~~~p~w~s~n~Gv~lC~~CsgvHR~LG~hiSkVrSl~lD~~~w~~~~l~~~~~~GN~ 467 (629)
.++++.++.|++.|+|+.|||||+++|+|||+|+|||||++||||||+||+|||+||||+|| .|++++|++|+.+||.
T Consensus 12 e~~~~~l~~L~~~p~N~~CaDCg~~~P~WaS~n~GvfiC~~CsgiHR~lG~hiS~VkSl~ld--~w~~~~l~~m~~~GN~ 89 (134)
T 2iqj_A 12 DRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD--QWTQEQIQCMQEMGNG 89 (134)
T ss_dssp -CCHHHHHHHTTSGGGGBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTS--CCCHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHcCcCCCcCCcCcCCCCCeEEecCCEEEhHhhhHHHhcCCCCCCceeecccc--CCCHHHHHHHHHHchH
Confidence 45678899999999999999999999999999999999999999999999999999999999 7999999999999999
Q ss_pred HHHHHHHhhhccCCCCCccccccCccccccccccccCCCCCCCCHHHHHHHHHHHhccCcccccCCC
Q 006831 468 YANSVWEELLRIGNNSLTDERHMGFSRTDKQKRFIVRKPNPDDSISVKEQYIHAKYAEKIFVHKRKD 534 (629)
Q Consensus 468 ~~N~i~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kP~~~~~~~~re~fI~~KY~~k~f~~~~~~ 534 (629)
.+|.+||+++|+. +.+|.+ .+.+|+||++||++|+|+.+..+
T Consensus 90 ~an~~~e~~lp~~----------------------~~~P~~---~~~~e~fIr~KY~~k~f~~~~~~ 131 (134)
T 2iqj_A 90 KANRLYEAYLPET----------------------FRRPQI---DPAVEGFIRDKYEKKKYMDRSLD 131 (134)
T ss_dssp HHHHHHTTTCCSS----------------------CCCCCS---HHHHHHHHHHHHTSCTTCCTTC-
T ss_pred HHHHHHHhcCCcc----------------------CCCCCc---hHHHHHHHHHHHhCCeeeCCccc
Confidence 9999999999863 356654 35789999999999999988653
No 5
>2crr_A Stromal membrane-associated protein SMAP1B; arfgap domain, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=301.22 Aligned_cols=118 Identities=42% Similarity=0.773 Sum_probs=108.5
Q ss_pred cccchHHHHHhccCCCCCCCCCCCCCCceecccceeEeccccccccccCcccceeeEeecCCCcCChhHHHHHhhcChhH
Q 006831 389 KNEKPIDLLRRVYGNNKCADCGASEPDWASLNLGVLICIQCSGVHRNLGVHISKVRSLTLDVKVWEPSVLNLFQSLGNIY 468 (629)
Q Consensus 389 ~~~~~~~~l~~~p~N~~CaDCg~~~p~w~s~n~Gv~lC~~CsgvHR~LG~hiSkVrSl~lD~~~w~~~~l~~~~~~GN~~ 468 (629)
++++.++.|++.|+|+.|||||+++|+|||+|+|||||++||||||+||||||+||||+|| .|++++|++|+.+||..
T Consensus 15 ~~~~~l~~L~~~p~N~~CaDCga~~P~WaS~n~GvfiC~~CsgiHR~LG~hiS~VkSl~ld--~w~~~~l~~m~~~GN~~ 92 (141)
T 2crr_A 15 QHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLD--QWTAEQIQCMQDMGNTK 92 (141)
T ss_dssp CHHHHHHHHHHSGGGSSCSSSCCSSCCSEETTTTEECCHHHHHHHHHHCTTTCCCBCSSSS--CCCHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHhCccCCcCCCCCCCCCCeEEeccCeEEhhhhhHhHhcCCCCCCeeeECCCC--CCCHHHHHHHHHHccHH
Confidence 4667889999999999999999999999999999999999999999999999999999999 79999999999999999
Q ss_pred HHHHHHhhhccCCCCCccccccCccccccccccccCCCCCCCCHHHHHHHHHHHhccCcccccCC
Q 006831 469 ANSVWEELLRIGNNSLTDERHMGFSRTDKQKRFIVRKPNPDDSISVKEQYIHAKYAEKIFVHKRK 533 (629)
Q Consensus 469 ~N~i~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kP~~~~~~~~re~fI~~KY~~k~f~~~~~ 533 (629)
+|.+||+++|+. +.+|.++ ..+|+||++||++|+|+.+..
T Consensus 93 an~~~e~~lp~~----------------------~~~P~~~---~~~e~fIr~KY~~k~f~~~~~ 132 (141)
T 2crr_A 93 ARLLYEANLPEN----------------------FRRPQTD---QAVEFFIRDKYEKKKYYDKNA 132 (141)
T ss_dssp HHHHGGGSCCTT----------------------CCCCCSH---HHHHHHHHHHHTSCTTCCCGG
T ss_pred HHHHHHhcCCcc----------------------cCCCCch---HHHHHHHHHHHhcCcccCCCc
Confidence 999999999873 3567543 578999999999999998754
No 6
>2olm_A Nucleoporin-like protein RIP; arfgap, GTPase-activating protein, REV-interacting protein, human immunodeficiency virus, AIDS, structural genomics; 1.48A {Homo sapiens} PDB: 2d9l_A
Probab=100.00 E-value=2e-38 Score=293.73 Aligned_cols=121 Identities=22% Similarity=0.480 Sum_probs=108.7
Q ss_pred ccccchHHHHHhccCCCCCCCCCCCCCCceecccceeEeccccccccccCcccceeeEeecCCCcCChhHHHHHhhcChh
Q 006831 388 VKNEKPIDLLRRVYGNNKCADCGASEPDWASLNLGVLICIQCSGVHRNLGVHISKVRSLTLDVKVWEPSVLNLFQSLGNI 467 (629)
Q Consensus 388 ~~~~~~~~~l~~~p~N~~CaDCg~~~p~w~s~n~Gv~lC~~CsgvHR~LG~hiSkVrSl~lD~~~w~~~~l~~~~~~GN~ 467 (629)
.++++.|+.|++.|+|+.|||||+++|+|||+|+|||||++||||||+||+| |+||||+|| .|++++|++|+.+||.
T Consensus 10 e~~~~~l~~l~~~p~N~~CaDCg~~~P~WaS~n~GvfiC~~CsgiHR~LG~~-s~VrSl~ld--~w~~~~l~~m~~~GN~ 86 (140)
T 2olm_A 10 EKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTVGSFVCTSCSGSLRGLNPP-HRVKSISMT--TFTQQEIEFLQKHGNE 86 (140)
T ss_dssp HHHHHHHHHHHTSGGGGSCTTTCSSCCCEEETTTTEEECHHHHHHHTTSSSC-CCEEETTTC--CCCHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHhcCcCCCcCCCCCCCCCCceeeccCEEEchhccchhccCCCc-ceeeecCCC--CCCHHHHHHHHHhccH
Confidence 3567788899999999999999999999999999999999999999999997 999999999 7999999999999999
Q ss_pred HHHHHHHhhhccCCCCCccccccCccccccccccccCCCCCCCCHHHHHHHHHHHhccCcccccCC
Q 006831 468 YANSVWEELLRIGNNSLTDERHMGFSRTDKQKRFIVRKPNPDDSISVKEQYIHAKYAEKIFVHKRK 533 (629)
Q Consensus 468 ~~N~i~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kP~~~~~~~~re~fI~~KY~~k~f~~~~~ 533 (629)
.+|.+||+++++.. ..+|.+.|+ ..+++||++||++|+|+.++.
T Consensus 87 ~an~~~e~~~~~~~---------------------~~~P~~~d~-~~~~~fIr~KYe~k~f~~~~~ 130 (140)
T 2olm_A 87 VCKQIWLGLFDDRS---------------------SAIPDFRDP-QKVKEFLQEKYEKKRWYVPPE 130 (140)
T ss_dssp HHHHHHTTTCCTTT---------------------SCCCCTTCH-HHHHHHHHHHHTSCTTCCCHH
T ss_pred HHHHHHHhhCCccc---------------------CCCCCCCCH-HHHHHHHHHHHcCCeeeCCcc
Confidence 99999999997631 246765554 567789999999999998864
No 7
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=100.00 E-value=2.5e-36 Score=311.49 Aligned_cols=172 Identities=35% Similarity=0.608 Sum_probs=154.3
Q ss_pred ccchHHHHHhccCCCCCCCCCCCCCCceecccceeEeccccccccccCcccceeeEeecCCCcCChhHHHHHhhcChhHH
Q 006831 390 NEKPIDLLRRVYGNNKCADCGASEPDWASLNLGVLICIQCSGVHRNLGVHISKVRSLTLDVKVWEPSVLNLFQSLGNIYA 469 (629)
Q Consensus 390 ~~~~~~~l~~~p~N~~CaDCg~~~p~w~s~n~Gv~lC~~CsgvHR~LG~hiSkVrSl~lD~~~w~~~~l~~~~~~GN~~~ 469 (629)
.++.++.|++.|+|+.|||||+++|+|+|+|+|+|+|++||||||+||+|||+||||+|| .|.++++.+|..+||..+
T Consensus 4 ~~~~~~~~~~~~~n~~c~dc~~~~p~w~s~~~g~~~c~~c~~~hr~lg~~is~v~s~~~d--~~~~~~l~~~~~~GN~~~ 81 (278)
T 1dcq_A 4 TKEIISEVQRMTGNDVCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRMQSLTLD--VLGTSELLLAKNIGNAGF 81 (278)
T ss_dssp HHHHHHHHHHSTTTTBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTS--CCCGGGGHHHHHSCHHHH
T ss_pred HHHHHHHHHcCCCCCcCCCCCCCCCCeEEecCCeEEcHHHHHHHhhcCCCcceeeeeecC--CCCHHHHHHHHHcCcHHH
Confidence 457888999999999999999999999999999999999999999999999999999999 799999999999999999
Q ss_pred HHHHHhhhccCCCCCccccccCccccccccccccCCCCCCCCHHHHHHHHHHHhccCcccccCCCCcchhhHHHHHHHHH
Q 006831 470 NSVWEELLRIGNNSLTDERHMGFSRTDKQKRFIVRKPNPDDSISVKEQYIHAKYAEKIFVHKRKDHHHLLSVAQQLWESV 549 (629)
Q Consensus 470 N~i~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kP~~~~~~~~re~fI~~KY~~k~f~~~~~~~~~~~~~~~~l~~av 549 (629)
|.|||+.++... ..||.+.++...+++||++||+.+.|..+..... ......|+.||
T Consensus 82 n~i~e~~l~~~~---------------------~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~--~~~l~~l~~a~ 138 (278)
T 1dcq_A 82 NEIMECCLPSED---------------------PVKPNPGSDMIARKDYITAKYMERRYARKKHADT--AAKLHSLCEAV 138 (278)
T ss_dssp HHHHTTTCCSSS---------------------CCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSH--HHHHHHHHHHH
T ss_pred HHHHHhhCChhh---------------------cCCCCCCCCHHHHHHHHHHHHHHhhccccccccc--chhhhhhhhHh
Confidence 999999998732 3589999999999999999999999999876544 35568899999
Q ss_pred hcCCHHHHHHHHHhCCCCcccc----CCCCCCCCcchHHhhh
Q 006831 550 RDNDKKAVYRQIICSEPNVNAI----HGQASYGKRLPLATVM 587 (629)
Q Consensus 550 ~~~d~~~~~~~l~~~gadvn~~----~~~~~~~t~l~la~~~ 587 (629)
..+|+..+..++ ..|+|+|.. .+...+.||||+|+..
T Consensus 139 ~~~d~~~~~~ll-~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~ 179 (278)
T 1dcq_A 139 KTRDIFGLLQAY-ADGVDLTEKIPLANGHEPDETALHLAVRS 179 (278)
T ss_dssp HTTCHHHHHHHH-HTTCCTTSBCCCSSCSSTTCBHHHHHHHH
T ss_pred hhcccHHHHHHH-HhhcchhhhccccccccCCCCcchHHHHh
Confidence 999999988665 789998853 4556789999999987
No 8
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=100.00 E-value=1.2e-36 Score=338.09 Aligned_cols=167 Identities=38% Similarity=0.612 Sum_probs=150.4
Q ss_pred ccchHHHHHhccCCCCCCCCCCCCCCceecccceeEeccccccccccCcccceeeEeecCCCcCChhHHHHHhhcChhHH
Q 006831 390 NEKPIDLLRRVYGNNKCADCGASEPDWASLNLGVLICIQCSGVHRNLGVHISKVRSLTLDVKVWEPSVLNLFQSLGNIYA 469 (629)
Q Consensus 390 ~~~~~~~l~~~p~N~~CaDCg~~~p~w~s~n~Gv~lC~~CsgvHR~LG~hiSkVrSl~lD~~~w~~~~l~~~~~~GN~~~ 469 (629)
+++.++.+++.|||..|||||+++|+|+|+|+|||+|++||||||+||+||||||||+|| .|+++++.+|+.+||..+
T Consensus 10 ~~~~~~~~~~~~~n~~c~dc~~~~p~w~s~~~~~~~c~~c~~~hr~lg~~~s~vrsl~ld--~w~~~~~~l~~~~GN~~a 87 (497)
T 3lvq_E 10 TKLLIAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLD--LLGPSELLLALNMGNTSF 87 (497)
T ss_dssp HHHHHHHHHTSTTTTBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTS--CCCGGGGTTTTTCCHHHH
T ss_pred HHHHHHHHhcCCCCCcccCCCCCCCCEEEechhHHhHHhhHHHHHhhccccceecccccC--CCCHHHHHHHHHHhhHHH
Confidence 457788999999999999999999999999999999999999999999999999999999 799999999999999999
Q ss_pred HHHHHhhhccCCCCCccccccCccccccccccccCCCCCCCCHHHHHHHHHHHhccCcccccCCCCcchhhHHHHHHHHH
Q 006831 470 NSVWEELLRIGNNSLTDERHMGFSRTDKQKRFIVRKPNPDDSISVKEQYIHAKYAEKIFVHKRKDHHHLLSVAQQLWESV 549 (629)
Q Consensus 470 N~i~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kP~~~~~~~~re~fI~~KY~~k~f~~~~~~~~~~~~~~~~l~~av 549 (629)
|.+||+.+++.. ..+|.+.+....|++||++||+++.|..+...+. ++|+.||
T Consensus 88 n~i~E~~lp~~~---------------------~~kP~~~s~~~~re~fIraky~~~~f~~~~~~~~------~~L~~A~ 140 (497)
T 3lvq_E 88 NEVMEAQLPSHG---------------------GPKPSAESDMGTRRDYIMAKYVEHRFARRCTPEP------QRLWTAI 140 (497)
T ss_dssp HHHHTTTCCSSS---------------------CSCCCTTCCHHHHHHHHHHHHTTCTTSCCCC-CH------HHHHHHH
T ss_pred HHHHHhhccccc---------------------CCCCCCcCcHHHHHHHHHHHhhcccccccccccH------HHHHHHH
Confidence 999999998632 3689999999999999999999999999876533 6899999
Q ss_pred hcCCHHHHHHHHHhCCCCcccc----CCCCCCCCcchHHhh
Q 006831 550 RDNDKKAVYRQIICSEPNVNAI----HGQASYGKRLPLATV 586 (629)
Q Consensus 550 ~~~d~~~~~~~l~~~gadvn~~----~~~~~~~t~l~la~~ 586 (629)
..+|+..+..+| ..|+|+|.. .....+.||||+|+.
T Consensus 141 ~~g~~~~v~~ll-~~g~~~n~~~~~~~~~~~g~t~Lh~A~~ 180 (497)
T 3lvq_E 141 CNRDLLSVLEAF-ANGQDFGQPLPGPDAQAPEELVLHLAVK 180 (497)
T ss_dssp HHTCHHHHHHHH-HTTCCSSSCBCCSSSCCSCBCHHHHHHH
T ss_pred hccCHHHHHHHH-hhcccccCCCCCcccccccchHHHHHHH
Confidence 999999988666 789999975 224568999999976
No 9
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=100.00 E-value=6.9e-36 Score=311.70 Aligned_cols=168 Identities=38% Similarity=0.610 Sum_probs=149.2
Q ss_pred ccchHHHHHhccCCCCCCCCCCCCCCceecccceeEeccccccccccCcccceeeEeecCCCcCChhHHHHHhhcChhHH
Q 006831 390 NEKPIDLLRRVYGNNKCADCGASEPDWASLNLGVLICIQCSGVHRNLGVHISKVRSLTLDVKVWEPSVLNLFQSLGNIYA 469 (629)
Q Consensus 390 ~~~~~~~l~~~p~N~~CaDCg~~~p~w~s~n~Gv~lC~~CsgvHR~LG~hiSkVrSl~lD~~~w~~~~l~~~~~~GN~~~ 469 (629)
.+..++.|++.|+|+.|||||+++|+|+|+|+|||+|++||||||+||+|||+||||+|| .|+++++.+|..+||..+
T Consensus 29 ~~~~~~~~~~~~~n~~c~dc~~~~p~w~s~~~g~~~c~~cs~~hr~lg~~is~v~sl~lD--~w~~~~l~~~~~~GN~~~ 106 (301)
T 2b0o_E 29 TKLLIAEVKSRPGNSQCCDCGAADPTWLSTNLGVLTCIQCSGVHRELGVRFSRMQSLTLD--LLGPSELLLALNMGNTSF 106 (301)
T ss_dssp HHHHHHHHHTSTTTTBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEETTTS--CCCHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHhcCCCCCcCCCCCCCCCCeEEeecCeEEcHHHHHHHHhhCCCcccccccCcC--CCCHHHHHHHHHcCCHHH
Confidence 456778899999999999999999999999999999999999999999999999999999 799999999999999999
Q ss_pred HHHHHhhhccCCCCCccccccCccccccccccccCCCCCCCCHHHHHHHHHHHhccCcccccCCCCcchhhHHHHHHHHH
Q 006831 470 NSVWEELLRIGNNSLTDERHMGFSRTDKQKRFIVRKPNPDDSISVKEQYIHAKYAEKIFVHKRKDHHHLLSVAQQLWESV 549 (629)
Q Consensus 470 N~i~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kP~~~~~~~~re~fI~~KY~~k~f~~~~~~~~~~~~~~~~l~~av 549 (629)
|.+||+.+++.. ..||.+.+....|++||++||+++.|..+.... .+.|+.||
T Consensus 107 n~i~E~~l~~~~---------------------~~kP~~~s~~~~r~~~I~~Ky~~~~f~~~~~~~------~~~L~~A~ 159 (301)
T 2b0o_E 107 NEVMEAQLPSHG---------------------GPKPSAESDMGTRRDYIMAKYVEHRFARRCTPE------PQRLWTAI 159 (301)
T ss_dssp HHHHTTTCCSSS---------------------CSCCCTTCCHHHHHHHHHHHHTSCTTSCCCC-C------HHHHHHHH
T ss_pred HHHHHHhhhhcc---------------------CCCCCCcccHHHHHHHHHHHHHhhhhhcccCch------HHHHhhhh
Confidence 999999998731 368888889999999999999999998875432 36799999
Q ss_pred hcCCHHHHHHHHHhCCCCccccC----CCCCCCCcchHHhhh
Q 006831 550 RDNDKKAVYRQIICSEPNVNAIH----GQASYGKRLPLATVM 587 (629)
Q Consensus 550 ~~~d~~~~~~~l~~~gadvn~~~----~~~~~~t~l~la~~~ 587 (629)
..+|+..+..+| ..|+|+|... ....+.||||+|+..
T Consensus 160 ~~g~~~~v~~ll-~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~ 200 (301)
T 2b0o_E 160 CNRDLLSVLEAF-ANGQDFGQPLPGPDAQAPEELVLHLAVKV 200 (301)
T ss_dssp HTTCHHHHHHHH-HTTCCTTSCEECSSSCSCEECHHHHHHHT
T ss_pred hccCHHHHHHHH-hcCCcccccCCCcccCCCCccHHHHHHHh
Confidence 999999988766 7899999841 234678999999976
No 10
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=100.00 E-value=7.6e-34 Score=306.64 Aligned_cols=122 Identities=40% Similarity=0.738 Sum_probs=115.0
Q ss_pred hccccchHHHHHhccCCCCCCCCCCCCCCceecccceeEeccccccccccCcccceeeEeecCCCcCChhHHHHHhhcCh
Q 006831 387 IVKNEKPIDLLRRVYGNNKCADCGASEPDWASLNLGVLICIQCSGVHRNLGVHISKVRSLTLDVKVWEPSVLNLFQSLGN 466 (629)
Q Consensus 387 ~~~~~~~~~~l~~~p~N~~CaDCg~~~p~w~s~n~Gv~lC~~CsgvHR~LG~hiSkVrSl~lD~~~w~~~~l~~~~~~GN 466 (629)
..++++.+..|.+.|||+.|||||+++|+|||+|+|||||++||||||+| +|||+||||+|| .|++++|++|+.+||
T Consensus 18 ~~~~~~~l~~l~~~~~N~~C~dC~~~~p~w~s~~~g~~~C~~Csg~hr~l-~his~v~s~~ld--~w~~~~~~~~~~~gN 94 (386)
T 3lju_X 18 GKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNI-PQVSKVKSVRLD--AWEEAQVEFMASHGN 94 (386)
T ss_dssp HHHHHHHHHHHTTSGGGSBCTTTCCBSCCEEETTTTEEECHHHHHHHHTC-TTTCCEEETTTS--CCCHHHHHHHHHSSH
T ss_pred hhHHHHHHHHHhcCcCCCcCccCCCCCCCeEEecccEEEhhhhchHhhCC-Cccceeeeeccc--CCCHHHHHHHHHhcc
Confidence 44578899999999999999999999999999999999999999999999 999999999999 799999999999999
Q ss_pred hHHHHHHHhhhccCCCCCccccccCccccccccccccCCCCCCCCHHHHHHHHHHHhccCcccccCC
Q 006831 467 IYANSVWEELLRIGNNSLTDERHMGFSRTDKQKRFIVRKPNPDDSISVKEQYIHAKYAEKIFVHKRK 533 (629)
Q Consensus 467 ~~~N~i~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kP~~~~~~~~re~fI~~KY~~k~f~~~~~ 533 (629)
..+|.+||+++|+. ..+|.++|+...||+||++||++++|+.+..
T Consensus 95 ~~~~~~~e~~~~~~----------------------~~~p~~~~~~~~~e~fIr~KY~~~~f~~~~~ 139 (386)
T 3lju_X 95 DAARARFESKVPSF----------------------YYRPTPSDCQLLREQWIRAKYERQEFIYPEK 139 (386)
T ss_dssp HHHHHHHTTTCCTT----------------------SCCCCTTSCHHHHHHHHHHHHTSCTTTSGGG
T ss_pred hHHHHHHhccCCcc----------------------CCCCCCccchHHHHHEHHhhhCCCEEECCcc
Confidence 99999999999863 3689999999999999999999999999865
No 11
>2owa_A Arfgap-like finger domain containing protein; zinc finger protein, cysteine-rich motif, GTPase activation; 2.00A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=3.8e-33 Score=257.13 Aligned_cols=109 Identities=30% Similarity=0.547 Sum_probs=94.3
Q ss_pred cchHHHHHhccCCCCCCCCCCCCCCceecccceeEeccccccccccCcccceeeEeecCCCcCChhHHHHHhhcChhHHH
Q 006831 391 EKPIDLLRRVYGNNKCADCGASEPDWASLNLGVLICIQCSGVHRNLGVHISKVRSLTLDVKVWEPSVLNLFQSLGNIYAN 470 (629)
Q Consensus 391 ~~~~~~l~~~p~N~~CaDCg~~~p~w~s~n~Gv~lC~~CsgvHR~LG~hiSkVrSl~lD~~~w~~~~l~~~~~~GN~~~N 470 (629)
+.+++.|++.|+|+.|||||+++|+|||+|+|||||++||||||+||+|||+||||+|| .|++++|++|+.+||..+|
T Consensus 24 ~~l~~~l~~~p~N~~CaDCga~~P~WaS~n~GvfiC~~CsgiHR~LG~hiS~VrSl~lD--~w~~~~l~~m~~~GN~~an 101 (138)
T 2owa_A 24 DNFFQIVRNRPENRTCFDCESRNPTWLSLSFAVFICLNCSSDHRKMGVHISFVRSSDLD--KFTPIQLVRMDIGGNGRAR 101 (138)
T ss_dssp HHHHHHHHHSGGGGBCTTTCCBSCCEEETTTTEEECHHHHHHHHTTCTTTCCEEETTTS--CCCHHHHHHHHHCCHHHHH
T ss_pred HHHHHHHHcCcCCCcCCCCcCCCCCeEEecCCEEEhHhhhHHHhCCCCCCCeeeecCcC--cCCHHHHHHHHhhccHHHH
Confidence 45677899999999999999999999999999999999999999999999999999999 7999999999999999999
Q ss_pred HHHHhhhccCCCCCccccccCccccccccccccCCCCCCCCHHHHHHHHHHHhccCc
Q 006831 471 SVWEELLRIGNNSLTDERHMGFSRTDKQKRFIVRKPNPDDSISVKEQYIHAKYAEKI 527 (629)
Q Consensus 471 ~i~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kP~~~~~~~~re~fI~~KY~~k~ 527 (629)
.+||++... .|. .+..+..+.||.+||+++.
T Consensus 102 ~~~e~~~~~-------------------------~~~-~~~~~kY~s~~a~~Y~~kL 132 (138)
T 2owa_A 102 NYFKQVLGV-------------------------NFS-PKTKEYASSICGRQYKQIL 132 (138)
T ss_dssp HHHHHHTCT-------------------------TCC-GGGCHHHHSHHHHHHHHHH
T ss_pred HHHHHHcCC-------------------------CCC-CCHHHHHhhHHHHHHHHHH
Confidence 999986432 111 1122445678999998763
No 12
>2crw_A ARF GAP 3, ADP-ribosylation factor GTPase-activating protein 3; arfgap domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.97 E-value=3.1e-32 Score=253.69 Aligned_cols=89 Identities=43% Similarity=0.677 Sum_probs=83.7
Q ss_pred ccchHHHHHhccCCCCCCCCCCCCCCceecccceeEeccccccccccCcccceeeEeecCCCcCChhHHHHHhhcChhHH
Q 006831 390 NEKPIDLLRRVYGNNKCADCGASEPDWASLNLGVLICIQCSGVHRNLGVHISKVRSLTLDVKVWEPSVLNLFQSLGNIYA 469 (629)
Q Consensus 390 ~~~~~~~l~~~p~N~~CaDCg~~~p~w~s~n~Gv~lC~~CsgvHR~LG~hiSkVrSl~lD~~~w~~~~l~~~~~~GN~~~ 469 (629)
.++.++.|+..|+|+.|||||+++|+|||+|||||||++||||||+||+|||+||||+||+ .|++++|++|+.+||..+
T Consensus 16 ~~~~l~~L~~~p~N~~CaDCga~~P~WaS~n~GvfiC~~CsgiHR~LG~hiS~VrSl~LD~-~W~~~~l~~m~~~GN~~a 94 (149)
T 2crw_A 16 ILTIFKRLRSVPTNKVCFDCGAKNPSWASITYGVFLCIDCSGSHRSLGVHLSFIRSTELDS-NWSWFQLRCMQVGGNASA 94 (149)
T ss_dssp HHHHHHHHHHSTTTSBCSSSCCBSCCCEETTTTEECCHHHHHHHHHHCTTTCCEECSSSCC-CCCHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHhcCcCCCcCCCCcCCCCCcEEeccCEEEchhcchhhccCCCCCCeeeccccCC-CCCHHHHHHHHHHhhHHH
Confidence 4577889999999999999999999999999999999999999999999999999999994 299999999999999999
Q ss_pred HHHHHhhhcc
Q 006831 470 NSVWEELLRI 479 (629)
Q Consensus 470 N~i~e~~l~~ 479 (629)
|.+||++..+
T Consensus 95 n~~~e~~~~~ 104 (149)
T 2crw_A 95 SSFFHQHGCS 104 (149)
T ss_dssp HHHHHHHCCC
T ss_pred HHHHHhcCCC
Confidence 9999998643
No 13
>3dwd_A ADP-ribosylation factor GTPase-activating protein; GAP, structural genomics consorti ER-golgi transport, golgi apparatus, GTPase activation; 2.40A {Homo sapiens}
Probab=99.97 E-value=4.3e-31 Score=243.72 Aligned_cols=87 Identities=39% Similarity=0.717 Sum_probs=81.5
Q ss_pred cccchHHHHHhccCCCCCCCCCCCCCCceecccceeEeccccccccccCcccceeeEeecCCCcCChhHHHHHhhcChhH
Q 006831 389 KNEKPIDLLRRVYGNNKCADCGASEPDWASLNLGVLICIQCSGVHRNLGVHISKVRSLTLDVKVWEPSVLNLFQSLGNIY 468 (629)
Q Consensus 389 ~~~~~~~~l~~~p~N~~CaDCg~~~p~w~s~n~Gv~lC~~CsgvHR~LG~hiSkVrSl~lD~~~w~~~~l~~~~~~GN~~ 468 (629)
++++.++.|++.|+|+.|||||+++|+|||+|+|||||++||||||+||+|||+||||+|| .|++++|++|+.+||.+
T Consensus 24 ~~~~~l~~L~~~p~N~~CaDCga~~P~WaS~nlGvfiC~~CSgiHR~LG~hISkVkSl~LD--~W~~~el~~m~~~GN~~ 101 (147)
T 3dwd_A 24 RTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD--KWKDIELEKMKAGGNAK 101 (147)
T ss_dssp HHHHHHHHHHTSTTTTBCTTTCCBSCCEEETTTTEEECHHHHHHHHHHCTTTCCEEESCC----CCHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHHcCcCCCccCCCCCCCCCeEEecccEeEhHhhChHHhcCCCCCCcccccccc--CCCHHHHHHHHHHhhHH
Confidence 3567889999999999999999999999999999999999999999999999999999999 79999999999999999
Q ss_pred HHHHHHhhh
Q 006831 469 ANSVWEELL 477 (629)
Q Consensus 469 ~N~i~e~~l 477 (629)
+|.+||+..
T Consensus 102 an~~~ea~~ 110 (147)
T 3dwd_A 102 FREFLESQE 110 (147)
T ss_dssp HHHHHHTST
T ss_pred HHHHHHhCC
Confidence 999999863
No 14
>2p57_A GTPase-activating protein ZNF289; zinc finger, GAP, structural genomics, structural genomics consortium, SGC, metal binding protein; 1.80A {Homo sapiens}
Probab=99.96 E-value=4e-30 Score=237.38 Aligned_cols=87 Identities=44% Similarity=0.746 Sum_probs=81.7
Q ss_pred ccchHHHHHhccCCCCCCCCCCCCCCceecccceeEeccccccccccCcccceeeEeecCCCcCChhHHHHHhhcChhHH
Q 006831 390 NEKPIDLLRRVYGNNKCADCGASEPDWASLNLGVLICIQCSGVHRNLGVHISKVRSLTLDVKVWEPSVLNLFQSLGNIYA 469 (629)
Q Consensus 390 ~~~~~~~l~~~p~N~~CaDCg~~~p~w~s~n~Gv~lC~~CsgvHR~LG~hiSkVrSl~lD~~~w~~~~l~~~~~~GN~~~ 469 (629)
.++.++.|+..|+|+.|+|||+++|+|+|+|||||||++||||||+||+|||+||||+||. .|++++|++|+.+||.++
T Consensus 24 ~~~~l~~L~~~p~N~~CaDCga~~P~WaS~n~GvfiC~~CsgiHR~LG~hIS~VrSl~LD~-~W~~~~l~~m~~~GN~~a 102 (144)
T 2p57_A 24 IQTLFKRLRAVPTNKACFDCGAKNPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELDS-NWNWFQLRCMQVGGNANA 102 (144)
T ss_dssp HHHHHHHHHHSGGGGBCTTTCCBSCCEEEGGGTEEECHHHHHHHHHHCTTTCCEEESSSCC-CCCHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHhcCCCCCcCCCCcCCCCCeEEeccCEEEhhhchHHHcCCCCCCCeeeecccCC-CCCHHHHHHHHHhCHHHH
Confidence 3456788899999999999999999999999999999999999999999999999999993 399999999999999999
Q ss_pred HHHHHhhh
Q 006831 470 NSVWEELL 477 (629)
Q Consensus 470 N~i~e~~l 477 (629)
|.+||+..
T Consensus 103 n~~~e~~g 110 (144)
T 2p57_A 103 TAFFRQHG 110 (144)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 99999873
No 15
>3sub_A ADP-ribosylation factor GTPase-activating protein; protein trafficking, hydrolase AC; 2.40A {Plasmodium falciparum 3D7}
Probab=99.96 E-value=5.1e-30 Score=239.72 Aligned_cols=88 Identities=43% Similarity=0.768 Sum_probs=81.6
Q ss_pred ccchHHHHHhc-cCCCCCCCCCCCCCCceecccceeEeccccccccccCcccceeeEeecCCCcCChhHHHHHhhcChhH
Q 006831 390 NEKPIDLLRRV-YGNNKCADCGASEPDWASLNLGVLICIQCSGVHRNLGVHISKVRSLTLDVKVWEPSVLNLFQSLGNIY 468 (629)
Q Consensus 390 ~~~~~~~l~~~-p~N~~CaDCg~~~p~w~s~n~Gv~lC~~CsgvHR~LG~hiSkVrSl~lD~~~w~~~~l~~~~~~GN~~ 468 (629)
.++.++.|++. |+|+.|||||+++|+|||+|+|||||++||||||+||+|||+||||+|| .|++++|++|+.+||..
T Consensus 8 a~~~l~~L~~~~p~N~~CaDCga~~P~WaS~nlGvflCi~CSGiHR~LG~hISkVKSltLD--~Wt~e~l~~m~~~GN~~ 85 (163)
T 3sub_A 8 AVEFINRLKKEDESNNKCFDCGISNPDWVSVNHGIFLCINCSGVHRSLGVHISIVRSIKMD--IFTDEQLKYIDKGGNKK 85 (163)
T ss_dssp HHHHHHHHHHHSGGGGBCTTTCCBSCCEEETTTTEEECHHHHHHHHHTCTTTCCEEETTTC--CCCHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHhCCCCCCccccCCCCCCCeEEecCCeeEHHhhhHHhcCCCCCCCeeeecccc--CcCHHHHHHHHhhCHHH
Confidence 34567777764 8999999999999999999999999999999999999999999999999 79999999999999999
Q ss_pred HHHHHHhhhcc
Q 006831 469 ANSVWEELLRI 479 (629)
Q Consensus 469 ~N~i~e~~l~~ 479 (629)
+|.+||+....
T Consensus 86 an~~~e~~g~~ 96 (163)
T 3sub_A 86 CQTYLENYGIS 96 (163)
T ss_dssp HHHHHHHTTCT
T ss_pred HHHHHHHcCCc
Confidence 99999997654
No 16
>3o47_A ADP-ribosylation factor GTPase-activating protein ribosylation factor 1; structural genomics consortium, GTPase activation; HET: GDP; 2.80A {Homo sapiens}
Probab=99.92 E-value=4.6e-26 Score=240.80 Aligned_cols=88 Identities=39% Similarity=0.708 Sum_probs=83.9
Q ss_pred cccchHHHHHhccCCCCCCCCCCCCCCceecccceeEeccccccccccCcccceeeEeecCCCcCChhHHHHHhhcChhH
Q 006831 389 KNEKPIDLLRRVYGNNKCADCGASEPDWASLNLGVLICIQCSGVHRNLGVHISKVRSLTLDVKVWEPSVLNLFQSLGNIY 468 (629)
Q Consensus 389 ~~~~~~~~l~~~p~N~~CaDCg~~~p~w~s~n~Gv~lC~~CsgvHR~LG~hiSkVrSl~lD~~~w~~~~l~~~~~~GN~~ 468 (629)
++++.++.|++.|+|+.|||||+++|+|||+|+|||||++||||||+||+|||+||||+|| .|++++|++|+.+||..
T Consensus 23 ~~~~~~~~~~~~~~n~~c~dc~~~~~~~~~~~~~~~~c~~c~~~hr~~~~~~s~v~s~~~~--~~~~~~~~~~~~~gN~~ 100 (329)
T 3o47_A 23 RTRKVLKEVRVQDENNVCFECGAFNPQWVSVTYGIWICLECSGRHRGLGVHLSFVRSVTMD--KWKDIELEKMKAGGNAK 100 (329)
T ss_dssp CHHHHHHHHHHSTTTTBCTTTCCBSCCEEEGGGTEEECHHHHHHHHHHCTTTCCEEESSSC--CCCHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHHcCCCCCcCCCCCCCCCCeEEecCCEEEChhhhhhhcccCCCcCEEeecccc--CCCHHHHHHHHHhCcHH
Confidence 3567889999999999999999999999999999999999999999999999999999999 79999999999999999
Q ss_pred HHHHHHhhhc
Q 006831 469 ANSVWEELLR 478 (629)
Q Consensus 469 ~N~i~e~~l~ 478 (629)
+|.+||+...
T Consensus 101 ~n~~~e~~~~ 110 (329)
T 3o47_A 101 FREFLESQED 110 (329)
T ss_dssp HHHHHHTCSS
T ss_pred HHHHHHhcCC
Confidence 9999998754
No 17
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=99.84 E-value=1.5e-20 Score=192.67 Aligned_cols=124 Identities=28% Similarity=0.370 Sum_probs=117.3
Q ss_pred hhhhhhHhHHHHHHHHHHhcccCCCCcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 006831 7 TVAFNGDGNFVLQAREKFLSLRKSTRMD-VAVVIEEDLHNARTSFEQARFNLVGALSNVEAKKRFELLEAVGGTMDAHLR 85 (629)
Q Consensus 7 ~~~Fe~~q~kyd~~~~ky~slsk~k~~~-~~~E~a~eL~~aRk~f~~asldyv~~l~~vq~kk~~e~le~l~~~~~a~~~ 85 (629)
-++||+++.+||++++||++++|+|+++ .++|++++|+.+|+.|++++||||.+|+.|+.++++++|+.+++||++|.+
T Consensus 130 kk~fdk~~~~yd~al~k~~~~~k~k~~e~~l~Ea~~~l~~~Rk~f~~~~ldyv~~l~~l~~kk~~e~le~l~~~~~a~~~ 209 (265)
T 2q12_A 130 KEVFQIASNDHDAAINRYSRLSKKRENDKVKYEVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQIS 209 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999999999999999999874 568999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHhhh-hchHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 006831 86 FFKQGYELLH-QMEPFINQVLAYAQQSRECSDYEQASLHQRMQDYL 130 (629)
Q Consensus 86 ff~~g~e~~~-~l~p~~~~l~~~~q~~r~~~~~~~~~L~~~m~~~k 130 (629)
||++||+++. +++||++++..++++.|.+++++++.+.++++.++
T Consensus 210 ff~~g~e~~~~~~~p~~~~l~~~l~~~r~~~~~~~~~~~~~~~~l~ 255 (265)
T 2q12_A 210 FFKMGSENLNEQLEEFLANIGTSVQNVRREMDSDIETMQQTIEDLE 255 (265)
T ss_dssp HHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999995 99999999999999999999999999888877665
No 18
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=99.83 E-value=2.2e-20 Score=170.50 Aligned_cols=117 Identities=26% Similarity=0.446 Sum_probs=78.1
Q ss_pred ceeEeeeeeeccCC-CCCCceeEEEEEecCceEEEEeCCCCCC--CcCCCcccccCCCCCCccccccccccccccCCCcc
Q 006831 177 QTIKQGYLSKRSSN-LRADWKRRFFVLDSRGLLYYYRKPWSWN--SAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVH 253 (629)
Q Consensus 177 ~~iKqGyL~Krs~~-~~k~WkRRwFvL~~~glLyYy~~~~~~~--~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~ 253 (629)
.++|+|||+|++++ .++.|++|||||+++++||||++..+.. .....+ ++...
T Consensus 3 ~~~k~G~L~K~~g~~~~k~WkkRwFvL~~~~~l~Y~~~~~d~~~~~~~~~i-------------~l~~~----------- 58 (128)
T 2rlo_A 3 IPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEM-------------DLLRT----------- 58 (128)
T ss_dssp CEEEEEEEEEECSCSTTCCEEEEEEEEETTTEEEEESSHHHHHHTCSCEEE-------------ESSSC-----------
T ss_pred cceeEEEEEEecCCCccCCccEEEEEEeCCCEEEEecchhhhccccCCCee-------------eeeee-----------
Confidence 57899999999653 6799999999999889999997632100 000000 00000
Q ss_pred ccccceeeEeecccceeecC-----CCCCCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHHHHhc
Q 006831 254 DEKSVARHTVNLLTSTIKPD-----ADQSDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIASLLS 318 (629)
Q Consensus 254 d~~~~~~~~i~l~~~~vk~~-----~d~~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~~~l~ 318 (629)
....+.+.|.+..|++.+. +...+++|||.|++++ |+|+|+|+|++|+++||++|+.+|..+|+
T Consensus 59 -~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~~l~ 128 (128)
T 2rlo_A 59 -TVKVPGKRPPRAISAFGPSASGSAGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILASLQ 128 (128)
T ss_dssp -EEECSSCCCCCSSCCCSCCSCCCCSSCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHHHHHC
T ss_pred -EEecCCCccccccccccccccccccccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHHHcC
Confidence 0001122233334433211 1112578999999998 99999999999999999999999998774
No 19
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=2.1e-19 Score=160.57 Aligned_cols=101 Identities=29% Similarity=0.502 Sum_probs=83.2
Q ss_pred CCcceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcc
Q 006831 174 GKVQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVH 253 (629)
Q Consensus 174 ~~~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~ 253 (629)
....++++|||+|++...++.|+||||||+ ++.|+||+++...
T Consensus 6 ~~~~~~~~G~L~K~~~~~~k~WkkR~fvL~-~~~L~yyk~~~~~------------------------------------ 48 (114)
T 2da0_A 6 SGYGSEKKGYLLKKSDGIRKVWQRRKCSVK-NGILTISHATSNR------------------------------------ 48 (114)
T ss_dssp CCCCSCEEEEEEEECSSSCCCEEEEEEEEE-TTEEEECCSSCCS------------------------------------
T ss_pred CCCCccEEEEEEEeCCCCCCCceeEEEEEe-CCEEEEEcCCCCC------------------------------------
Confidence 345678999999998766689999999997 6778888775432
Q ss_pred ccccceeeEeecccceeecCCCCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHHHHHhcc
Q 006831 254 DEKSVARHTVNLLTSTIKPDADQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVIASLLSF 319 (629)
Q Consensus 254 d~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI~~~l~~ 319 (629)
....+.++.|.+.+. .+++|||+|+++.|+|+|+|+|++|+++||.+|+.+|..+++.
T Consensus 49 -----~~~~i~l~~~~v~~~---~~~~~~F~I~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~ 106 (114)
T 2da0_A 49 -----QPAKLNLLTCQVKPN---AEDKKSFDLISHNRTYHFQAEDEQDYVAWISVLTNSKEEALTM 106 (114)
T ss_dssp -----CCEEEETTTSEEEEC---SSSSSCEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHHHHTT
T ss_pred -----CCCEEEeeeeEEEEC---CCCCCEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 124566777777653 2467999999999999999999999999999999999998875
No 20
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.80 E-value=2.3e-19 Score=163.03 Aligned_cols=97 Identities=19% Similarity=0.333 Sum_probs=78.4
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEe----CCCCCCCcCCCcccccCCCCCCccccccccccccccCCCc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYR----KPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGV 252 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~----~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v 252 (629)
...++|||+|+++...|.||||||||+++ .||||+ ++.+
T Consensus 7 n~~~~G~L~KqG~~~~K~WKrRwFVL~~~-~LyYfk~~~~~~~~------------------------------------ 49 (126)
T 1wi1_A 7 GMKHSGYLWAIGKNVWKRWKKRFFVLVQV-SQYTFAMCSYREKK------------------------------------ 49 (126)
T ss_dssp CEEEEEEEEEECSSSCCSCEEEEEEEEEE-ETTEEEEEECCSSS------------------------------------
T ss_pred CCceeEEEEEeCCCcccccceEEEEEeCC-EEEEEEcccccccC------------------------------------
Confidence 35799999999887679999999999954 677776 4433
Q ss_pred cccccceeeEeecccceeec---CCCCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 253 HDEKSVARHTVNLLTSTIKP---DADQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 253 ~d~~~~~~~~i~l~~~~vk~---~~d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
..+.+.|.|..++|.. .++...++|+|+|++++++|+|+|+|++||.+||.||..++-
T Consensus 50 ----~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~~v~~~~ty~~~Adseee~~~WikAi~~A~~ 110 (126)
T 1wi1_A 50 ----AEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATG 110 (126)
T ss_dssp ----SCCSEEEECSSCEEEECCCCSSCCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred ----CCCceEEECCCcEEEEecCCcccccCceEEEEecCCceEEEEcCCHHHHHHHHHHHHHHhc
Confidence 1234677888888863 333456889999999999999999999999999999998884
No 21
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.76 E-value=1.5e-18 Score=149.31 Aligned_cols=92 Identities=25% Similarity=0.376 Sum_probs=73.2
Q ss_pred eeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcccccc
Q 006831 178 TIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEKS 257 (629)
Q Consensus 178 ~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~~ 257 (629)
+.|+|||+|+++. .+.|++|||||+ ++.|+||+++.+. ..
T Consensus 1 V~k~G~L~K~g~~-~k~WkkR~FvL~-~~~L~Yy~~~~~~--------------------------------------~~ 40 (94)
T 2rsg_A 1 VERCGVLSKWTNY-IHGWQDRWVVLK-NNALSYYKSEDET--------------------------------------EY 40 (94)
T ss_dssp CCEEEEEEEESSS-TTCEEEEEEEEE-TTEEEEESSTTGG--------------------------------------GT
T ss_pred CCEEEEEEEeCCC-CCCceEEEEEEE-CCEEEEEEecccc--------------------------------------cc
Confidence 4689999999765 589999999998 5678888766432 01
Q ss_pred ceeeEeecccceeecCCCCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHH
Q 006831 258 VARHTVNLLTSTIKPDADQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGV 312 (629)
Q Consensus 258 ~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~a 312 (629)
.+.+.+++..|.+.+. ...+++|.|.+++|+|+|+|+|++|+++||++|+.+
T Consensus 41 ~~~~~i~l~~~~~~~~---~~~~~~F~i~~~~r~~~l~A~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 41 GCRGSICLSKAVITPH---DFDECRFDISVNDSVWYLRAQDPDHRQQWIDAIEQH 92 (94)
T ss_dssp CCSEEEETTTCEEEEC---SSCSSEEEEEETTEEEEEECCSSCCTHHHHHHHHHH
T ss_pred cceeeEecceeeeecC---cccceeEEEEeCCeEEEEECCCHHHHHHHHHHHHhh
Confidence 2346677777777653 245799999999999999999999999999999876
No 22
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.76 E-value=3.3e-18 Score=157.32 Aligned_cols=95 Identities=20% Similarity=0.354 Sum_probs=75.3
Q ss_pred cceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcccc
Q 006831 176 VQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDE 255 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~ 255 (629)
..++++|||+|++ ..+.|+||||||+ ++.|+||+++.+.
T Consensus 6 ~~v~k~GwL~K~g--~~k~WkrRWfVLk-~~~L~yyk~~~~~-------------------------------------- 44 (130)
T 1v88_A 6 SGIVMADWLKIRG--TLKSWTKLWCVLK-PGVLLIYKTQKNG-------------------------------------- 44 (130)
T ss_dssp SSCCEEEEEEECC--SSSSCEEEEEEEE-TTEEEEESCSSSC--------------------------------------
T ss_pred CceEEEeEEEEeC--CCCCceEEEEEEE-CCEEEEECCCCCC--------------------------------------
Confidence 4678999999987 4589999999998 6778888877542
Q ss_pred ccceeeEeecccceeecCCCCCCCcceEEEeeCC------------------------cEEEEEeCCHHHHHHHHHHHHH
Q 006831 256 KSVARHTVNLLTSTIKPDADQSDLRFCFRIISPT------------------------KVYTLQAENTLDQMDWIEKING 311 (629)
Q Consensus 256 ~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~------------------------rty~LqAeSe~E~~~WI~aI~~ 311 (629)
.+.+.|.|..|.+... ....++|||+|+++. ++|+|+|+|++|+++||.||+.
T Consensus 45 --~p~G~I~L~~~~v~~~-~~~~~~~~F~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~ 121 (130)
T 1v88_A 45 --QWVGTVLLNACEIIER-PSKKDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALEL 121 (130)
T ss_dssp --CCCEEEECSSCEECCC-CTTTSSCEEEEECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHH
T ss_pred --CceEEEEcCCCEEEEC-CCCCCCeEEEEEcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHH
Confidence 2346778888887543 233456999999864 3599999999999999999999
Q ss_pred HHH
Q 006831 312 VIA 314 (629)
Q Consensus 312 aI~ 314 (629)
+|.
T Consensus 122 a~~ 124 (130)
T 1v88_A 122 ALK 124 (130)
T ss_dssp HHT
T ss_pred HHh
Confidence 884
No 23
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=6e-18 Score=152.33 Aligned_cols=102 Identities=24% Similarity=0.351 Sum_probs=80.9
Q ss_pred cceeEeeeeeeccCC-CCCCceeEEEEEecCc-eEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcc
Q 006831 176 VQTIKQGYLSKRSSN-LRADWKRRFFVLDSRG-LLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVH 253 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~-~~k~WkRRwFvL~~~g-lLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~ 253 (629)
..++++|||+|++.. ..+.|+||||||++++ .|+||+++.+.
T Consensus 6 ~~~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~~~------------------------------------ 49 (119)
T 2dhk_A 6 SGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQDA------------------------------------ 49 (119)
T ss_dssp SCCCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTTCC------------------------------------
T ss_pred CCCcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCCCc------------------------------------
Confidence 456789999999863 5689999999999654 79999876542
Q ss_pred ccccceeeEeecccceeecCCCCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHHHHHhcc
Q 006831 254 DEKSVARHTVNLLTSTIKPDADQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVIASLLSF 319 (629)
Q Consensus 254 d~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI~~~l~~ 319 (629)
.+.+.|+|..+.+... ...+++||.|+++.|+|+|+|+|++|+++||.+|+.++....+.
T Consensus 50 ----~~~g~I~L~~~~~~~~--~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~ 109 (119)
T 2dhk_A 50 ----NPLDSIDLSSAVFDCK--ADAEEGIFEIKTPSRVITLKAATKQAMLYWLQQLQMKRWEFHNS 109 (119)
T ss_dssp ----SCSEEEEGGGCEEEEC--TTGGGCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHHHHHHS
T ss_pred ----ccccEEECCCCEEEec--CCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHHhcCC
Confidence 2345677766665542 22457999999999999999999999999999999999776643
No 24
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=3e-18 Score=154.30 Aligned_cols=103 Identities=25% Similarity=0.469 Sum_probs=82.2
Q ss_pred CCcceeEeeeeeeccCCCCCCceeEEEEEec-CceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCc
Q 006831 174 GKVQTIKQGYLSKRSSNLRADWKRRFFVLDS-RGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGV 252 (629)
Q Consensus 174 ~~~~~iKqGyL~Krs~~~~k~WkRRwFvL~~-~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v 252 (629)
+...++++|||+|++.. .+.|++|||||+. ++.|+||+++.+.
T Consensus 4 ~~~~~~~~G~L~K~~~~-~~~Wk~R~fvL~~~~~~L~Yyk~~~~~----------------------------------- 47 (120)
T 2d9x_A 4 GSSGENVYGYLMKYTNL-VTGWQYRFFVLNNEAGLLEYFVNEQSR----------------------------------- 47 (120)
T ss_dssp CCSCCCCEEEEEEEEET-TTEEEEEEEEECTTTCEEEEESSGGGS-----------------------------------
T ss_pred CCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCEEEEEecCccc-----------------------------------
Confidence 33467899999999864 5899999999986 6899999876431
Q ss_pred cccccceeeEeecccceeecCCCCCCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHHHHhc
Q 006831 253 HDEKSVARHTVNLLTSTIKPDADQSDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIASLLS 318 (629)
Q Consensus 253 ~d~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~~~l~ 318 (629)
...+.+.|+|..|.|.+. ..+++||.|++++ |+|+|+|+|++|+++||.+|+.+|.....
T Consensus 48 ---~~~~~g~I~L~~~~v~~~---~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 108 (120)
T 2d9x_A 48 ---NQKPRGTLQLAGAVISPS---DEDSHTFTVNAASGEQYKLRATDAKERQHWVSRLQICTQHHTE 108 (120)
T ss_dssp ---SSCCSEEEECTTCCEECC---SSSSSCEEECCSSSCCEEECCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCccceEEcceEEEEec---CCCCCEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHHhhh
Confidence 012346788888877653 2457999999997 99999999999999999999999976544
No 25
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.75 E-value=1e-17 Score=147.86 Aligned_cols=96 Identities=21% Similarity=0.403 Sum_probs=75.8
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
.++++|||+|++.. .+.|+||||||+ ++.|+||+++.+.
T Consensus 7 ~~~~~G~L~K~~~~-~~~Wk~RwfvL~-~~~L~yyk~~~~~--------------------------------------- 45 (109)
T 1wgq_A 7 GSTMSGYLYRSKGS-KKPWKHLWFVIK-NKVLYTYAASEDV--------------------------------------- 45 (109)
T ss_dssp SCSCEEEEEEESST-TSCCEEEEEEEE-TTEEEEESCTTCS---------------------------------------
T ss_pred CCeEEEEEEeCCCC-CCCceeEEEEEe-CCEEEEECCCCcC---------------------------------------
Confidence 45789999999665 589999999998 5778888776542
Q ss_pred cceeeEeecccceeecCCCCCCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 257 SVARHTVNLLTSTIKPDADQSDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 257 ~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
.+...|+|..+.+....+...++|||.|++++ ++|+|+|+|++|+.+||.+|+.++.
T Consensus 46 -~~~~~i~L~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a~~ 103 (109)
T 1wgq_A 46 -AALESQPLLGFTVTLVKDENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGTV 103 (109)
T ss_dssp -SCSEEEECSSEEEEECCCSSCSSSEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHHS
T ss_pred -ccCceEECCCCEEEECCCCCCCCcEEEEEeCCCeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 23356677766665544444567999999886 7899999999999999999998863
No 26
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.75 E-value=1.3e-17 Score=152.59 Aligned_cols=108 Identities=19% Similarity=0.280 Sum_probs=73.2
Q ss_pred CCcceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcc
Q 006831 174 GKVQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVH 253 (629)
Q Consensus 174 ~~~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~ 253 (629)
+...++++|||+|+++. .+.|+||||||+.++.|+||+++.+... .|.+.
T Consensus 4 ~~~~v~~~G~L~K~g~~-~k~WkkRwFVL~~~~~L~Yyk~~~~~~~-----------------------------~g~i~ 53 (130)
T 2d9v_A 4 GSSGLVRGGWLWRQSSI-LRRWKRNWFALWLDGTLGYYHDETAQDE-----------------------------EDRVV 53 (130)
T ss_dssp SCCCEEEEEEEEEECSS-SCCEEEEEEEEETTTEEEEESSSSTTSE-----------------------------EEEEE
T ss_pred CCCceeEEEEEEeecCc-cCCceeeEEEEccCCEEEEEeCCCCCCc-----------------------------CceEe
Confidence 34568999999999765 4899999999955788999987754200 00000
Q ss_pred ccccceeeEeecc-cc-eeecCCCCCCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 254 DEKSVARHTVNLL-TS-TIKPDADQSDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 254 d~~~~~~~~i~l~-~~-~vk~~~d~~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
.. .....+.+. .| .+.+ ++...++|||+|++++ |+|+|+|+|++|+++||++|+.++.
T Consensus 54 l~--~~~~~i~~~~~~~~v~~-~~~~~~~~~F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~ 114 (130)
T 2d9v_A 54 IH--FNVRDIKVGQECQDVQP-PEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANS 114 (130)
T ss_dssp CT--TTEEEEEEGGGCSSCCC-CSSCCTTTEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred cc--cceeEEeccccccccCC-CCCCCcCcEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 00 000011110 11 2222 2345678999999965 9999999999999999999998875
No 27
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.75 E-value=1.6e-17 Score=147.26 Aligned_cols=99 Identities=25% Similarity=0.378 Sum_probs=77.7
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
.++++|||+|+++. .+.|+||||||++ +.|+||+++.+.
T Consensus 4 ~~~~~G~L~K~g~~-~~~Wk~R~fvL~~-~~L~yy~~~~~~--------------------------------------- 42 (113)
T 1pls_A 4 KRIREGYLVKKGSV-FNTWKPMWVVLLE-DGIEFYKKKSDN--------------------------------------- 42 (113)
T ss_dssp CCSEEEEEEEESSS-SSCCEEEEEEEET-TEEEEESSTTCS---------------------------------------
T ss_pred CCcEEEEEEEeCCC-CCCceEEEEEEEC-CEEEEEeCCCCC---------------------------------------
Confidence 46899999999765 4889999999985 568888766431
Q ss_pred cceeeEeecccceeec-CCCCCCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006831 257 SVARHTVNLLTSTIKP-DADQSDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIASLL 317 (629)
Q Consensus 257 ~~~~~~i~l~~~~vk~-~~d~~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~~~l 317 (629)
.+.+.|+|..+.+.. ..+...++|||.|++++ ++|+|+|+|++|+++||.+|+.+|....
T Consensus 43 -~~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~ 104 (113)
T 1pls_A 43 -SPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAIKCIE 104 (113)
T ss_dssp -SCSEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHHHT
T ss_pred -CcceEEEcCCCEEEEecCCCCCCccEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHhccc
Confidence 234566676665532 23445678999999987 8999999999999999999999997654
No 28
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=1.2e-17 Score=148.15 Aligned_cols=101 Identities=23% Similarity=0.429 Sum_probs=78.5
Q ss_pred cceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcccc
Q 006831 176 VQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDE 255 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~ 255 (629)
..++++|||.|++.. .+.|++|||||++ +.|+||+++.+.
T Consensus 6 ~~~~~~G~L~K~~~~-~~~Wk~R~fvL~~-~~L~yy~~~~~~-------------------------------------- 45 (115)
T 2dn6_A 6 SGVLKQGYMMKKGHR-RKNWTERWFVLKP-NIISYYVSEDLK-------------------------------------- 45 (115)
T ss_dssp CSCSEEEEEEEECTT-SSCEEEEEEEECS-SCEEEESSTTCS--------------------------------------
T ss_pred CCceEEEEEEecCCC-CCCcEEeEEEEEC-CEEEEeCCCCCc--------------------------------------
Confidence 457899999999765 5889999999985 567888765431
Q ss_pred ccceeeEeeccc-ceeecCCCCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHHHHHhc
Q 006831 256 KSVARHTVNLLT-STIKPDADQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVIASLLS 318 (629)
Q Consensus 256 ~~~~~~~i~l~~-~~vk~~~d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI~~~l~ 318 (629)
.+.+.|.|.. +.+...++...+++||.|++++++|+|+|+|++|+++||.+|+.+|...-.
T Consensus 46 --~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~~ 107 (115)
T 2dn6_A 46 --DKKGDILLDENCCVESLPDKDGKKCLFLVKCFDKTFEISASDKKKKQEWIQAIHSTIHLLKL 107 (115)
T ss_dssp --SEEEEECCCTTCEEEEECCCTTCCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred --ccCcEEEecCcEEEEECCCCCCCeeEEEEEeCCCEEEEEcCCHHHHHHHHHHHHHHHHHHhc
Confidence 2345566654 345443444567899999999999999999999999999999999976543
No 29
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=99.75 E-value=1e-17 Score=153.53 Aligned_cols=111 Identities=23% Similarity=0.362 Sum_probs=80.2
Q ss_pred cceeEeeeeeec-----cCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCC
Q 006831 176 VQTIKQGYLSKR-----SSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHG 250 (629)
Q Consensus 176 ~~~iKqGyL~Kr-----s~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g 250 (629)
..++|+|||.|+ +...++.|++|||||++ +.|+||+++.....+..
T Consensus 10 ~~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~~-~~L~yykd~~~~~~~~~---------------------------- 60 (129)
T 2p0d_A 10 HEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTG-NSLVFYREPPPTAPSSG---------------------------- 60 (129)
T ss_dssp CSEEEEEEEEEEEEEETTEECCCCCEEEEEEEES-SEEEEESCC------------------------------------
T ss_pred cceeEEEEEEEeeeccCCCcCCCCceEEEEEEeC-CEEEEEcCccccccccc----------------------------
Confidence 367899999985 33356899999999995 55777777643210000
Q ss_pred CccccccceeeEeecccceeecCCCCCCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006831 251 GVHDEKSVARHTVNLLTSTIKPDADQSDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIASL 316 (629)
Q Consensus 251 ~v~d~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~~~ 316 (629)
..+....+.+.|+|..|.+....+...++|||+|.+++ ++|+|||+|++||++||.+|+.+|..+
T Consensus 61 -~~~~~~~p~g~I~L~~~~v~~~~~~~kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~~ 126 (129)
T 2p0d_A 61 -WGPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERL 126 (129)
T ss_dssp -------CCSEEEECTTCEEEECTTSCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHHHH
T ss_pred -ccccCCCCccEEEeCCcEEEECCCCCCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 00001234577888888887655566788999999987 789999999999999999999999864
No 30
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.74 E-value=5.4e-18 Score=155.02 Aligned_cols=100 Identities=27% Similarity=0.479 Sum_probs=73.4
Q ss_pred eEeeeeeeccCCCCCCceeEEEEEec--CceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 179 IKQGYLSKRSSNLRADWKRRFFVLDS--RGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 179 iKqGyL~Krs~~~~k~WkRRwFvL~~--~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
.++|||.|+++...+.|+||||||+. +.+||||+++.+.+.+
T Consensus 16 ~~~G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~------------------------------------ 59 (126)
T 1v5p_A 16 RICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVG------------------------------------ 59 (126)
T ss_dssp CEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCTT------------------------------------
T ss_pred ceEEEEEEeCCCCCCCccceEEEEecCCCCEEEEECCCCCCCCC------------------------------------
Confidence 47999999985556999999999983 5688998885331100
Q ss_pred cceeeEeeccc-ceeecCC--CCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 257 SVARHTVNLLT-STIKPDA--DQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 257 ~~~~~~i~l~~-~~vk~~~--d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
..+.+.|.|.. +.|.... +...++|||.|.++.|+|+|+|+|++||++||.+|+.++.
T Consensus 60 ~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~a~~ 120 (126)
T 1v5p_A 60 AGAVGSLQLTYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALNQASK 120 (126)
T ss_dssp CCCSEEEETTTCCEEEECCTTTSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred ceeeEEEECCCccEEecCCcccCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHh
Confidence 12335555554 3443321 1335689999999999999999999999999999997753
No 31
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.74 E-value=1.1e-17 Score=157.29 Aligned_cols=96 Identities=18% Similarity=0.268 Sum_probs=72.5
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
.++|+|||+|+++.. +.|+||||||+++ .||||+++.+.
T Consensus 17 pv~keG~L~Kkg~~~-k~WkrRWFvLk~~-~L~Yyk~~~d~--------------------------------------- 55 (149)
T 1x1f_A 17 PLYFEGFLLIKRSGY-REYEHYWTELRGT-TLFFYTDKKSI--------------------------------------- 55 (149)
T ss_dssp CEEEEEEEEEECTTC-CSCEEEEEEEETT-EEEEESCSSCS---------------------------------------
T ss_pred CccEEEEEEEeCCCC-CCceeEEEEEcCC-EEEEEeCCCcc---------------------------------------
Confidence 489999999998765 8999999999965 67778776542
Q ss_pred cceeeEeecccceeec-CCCCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 257 SVARHTVNLLTSTIKP-DADQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 257 ~~~~~~i~l~~~~vk~-~~d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
.+.+.|+|..+++.. ......+++||.|++++|+|+|+|+|++|+++||.+|+.++.
T Consensus 56 -~~~g~I~L~~~~~~~~~~~~~~~~~~F~I~t~~r~~~f~A~s~ee~~eWi~aI~~v~~ 113 (149)
T 1x1f_A 56 -IYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFILTVTE 113 (149)
T ss_dssp -SCSEECCCSSCCEEEECCCTTSCCCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred -ccCcEEECCCceEEeeccCCCCcCcEEEEEcCCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 112344454444331 111123579999999999999999999999999999998875
No 32
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=99.74 E-value=1.1e-17 Score=146.19 Aligned_cols=99 Identities=29% Similarity=0.624 Sum_probs=77.8
Q ss_pred ceeEeeeeeeccCC---CCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcc
Q 006831 177 QTIKQGYLSKRSSN---LRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVH 253 (629)
Q Consensus 177 ~~iKqGyL~Krs~~---~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~ 253 (629)
.++++|||+|+++. .++.|++|||+|+ ++.|+||+++.+.
T Consensus 2 ~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~-~~~L~yy~~~~~~------------------------------------ 44 (108)
T 1u5d_A 2 SVIKQGYLEKKSKDHSFFGSEWQKRWCVVS-RGLFYYYANEKSK------------------------------------ 44 (108)
T ss_dssp CEEEEEEEEEEEECSSSSCEEEEEEEEEEE-TTEEEEESSTTCS------------------------------------
T ss_pred CccEEEEEEEcCCCCCccccCceeeEEEEe-CCEEEEecCCCCC------------------------------------
Confidence 47899999999854 2378999999998 5678888766432
Q ss_pred ccccceeeEeecccceeecCC---CCCCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006831 254 DEKSVARHTVNLLTSTIKPDA---DQSDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIASL 316 (629)
Q Consensus 254 d~~~~~~~~i~l~~~~vk~~~---d~~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~~~ 316 (629)
.+.+.|+|..+.+...+ ....++|||.|++++ ++|+|+|+|++|+++||.+|+.+|+.+
T Consensus 45 ----~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~i~~l 107 (108)
T 1u5d_A 45 ----QPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISFLLKDL 107 (108)
T ss_dssp ----SCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred ----CCCEEEEecceEEEeCCccccccCCcceEEEEcCCCcEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 23355667666665431 334568999999998 999999999999999999999999764
No 33
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.74 E-value=5e-18 Score=149.74 Aligned_cols=95 Identities=20% Similarity=0.402 Sum_probs=75.6
Q ss_pred cceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcccc
Q 006831 176 VQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDE 255 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~ 255 (629)
..++++|||+|+ ..+.|+||||||++ +.|+||+++...
T Consensus 6 ~~~~~~G~L~K~---~~k~Wk~RwfvL~~-~~L~yyk~~~~~-------------------------------------- 43 (107)
T 2cof_A 6 SGLETSSYLNVL---VNSQWKSRWCSVRD-NHLHFYQDRNRS-------------------------------------- 43 (107)
T ss_dssp CCCTTCCEEEEE---ETTEEEEEEEEECS-SCEEEECSSTTC--------------------------------------
T ss_pred CCCcEeEEEEEe---cCCCcceEEEEEEC-CEEEEEeCCccc--------------------------------------
Confidence 356789999999 35899999999985 567888766431
Q ss_pred ccceeeEeecccceeecCCCCCCCcceEEEeeC-CcEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 256 KSVARHTVNLLTSTIKPDADQSDLRFCFRIISP-TKVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 256 ~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~-~rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
..+.+.|++..|.|.+.. +..++|||.|+++ .|+|+|+|+|++|+++||.+|+.++.
T Consensus 44 -~~~~~~i~l~~~~v~~~~-~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~~~~ 101 (107)
T 2cof_A 44 -KVAQQPLSLVGCEVVPDP-SPDHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSESG 101 (107)
T ss_dssp -SEEEEEECTTTCEEECCC-BTTBSCEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHSS
T ss_pred -CCCeeEEeccceEEEECC-CCCCCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 234466777888777643 3567899999999 69999999999999999999997653
No 34
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=99.73 E-value=2.5e-17 Score=147.99 Aligned_cols=99 Identities=28% Similarity=0.492 Sum_probs=78.1
Q ss_pred cceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcccc
Q 006831 176 VQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDE 255 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~ 255 (629)
..++++|||+|+++...+.|++|||||+ ++.|+||+++.+.
T Consensus 9 ~~~~~~G~L~K~~~~~~~~WkkR~fvL~-~~~L~yy~~~~~~-------------------------------------- 49 (123)
T 1upq_A 9 LPVHIRGWLHKQDSSGLRLWKRRWFVLS-GHCLFYYKDSREE-------------------------------------- 49 (123)
T ss_dssp SCEEEEEEEEEECSSSSCCEEEEEEEEE-TTEEEEESSTTCC--------------------------------------
T ss_pred CCceEEEEEEeeCCCCCCCceeEEEEEe-CCEEEEECCCCCc--------------------------------------
Confidence 3578999999998655689999999998 6778888766442
Q ss_pred ccceeeEeecccceeecCCC--CCCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHHH
Q 006831 256 KSVARHTVNLLTSTIKPDAD--QSDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIAS 315 (629)
Q Consensus 256 ~~~~~~~i~l~~~~vk~~~d--~~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~~ 315 (629)
.+.+.|.|..+.+..... ...++|||.|.+++ ++|+|+|+|++|+.+||.+|+.+|..
T Consensus 50 --~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 110 (123)
T 1upq_A 50 --SVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASRA 110 (123)
T ss_dssp --SCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTSCCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred --ccceEEECCCCEEEECCCCccCCCcEEEEEECCCCeEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 233556666666665422 33578999999988 99999999999999999999999853
No 35
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=99.73 E-value=1.4e-17 Score=148.85 Aligned_cols=96 Identities=23% Similarity=0.427 Sum_probs=71.7
Q ss_pred EeeeeeeccCC---CCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 180 KQGYLSKRSSN---LRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 180 KqGyL~Krs~~---~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
|+|||.|+++. ..+.|++|||||+ ++.||||+++.+.
T Consensus 2 keG~L~kK~g~~~~~~k~Wk~rwfvL~-~~~L~~yk~~~~~--------------------------------------- 41 (112)
T 3cxb_B 2 KEGMLHYKAGTSYLGKEHWKTCFVVLS-NGILYQYPDRTDV--------------------------------------- 41 (112)
T ss_dssp EEEEEEECCSCCCSSCCCCEEEEEEEE-TTEEEEESSSSCC---------------------------------------
T ss_pred ceEEEEEeCCCCCCCCCCceEEEEEEE-CCEEEEECCCCCC---------------------------------------
Confidence 79999987543 4689999999998 5678888876542
Q ss_pred cceeeEeecccceee--cCCCCCCCcceEEEeeC-CcEEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006831 257 SVARHTVNLLTSTIK--PDADQSDLRFCFRIISP-TKVYTLQAENTLDQMDWIEKINGVIASL 316 (629)
Q Consensus 257 ~~~~~~i~l~~~~vk--~~~d~~drrfcF~Iit~-~rty~LqAeSe~E~~~WI~aI~~aI~~~ 316 (629)
.+...|+|..+.+. ...+...++|||+|+++ .++|+|||+|++||++||.+|+.+|...
T Consensus 42 -~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~~~y~f~A~s~ee~~~Wi~ai~~~~~~~ 103 (112)
T 3cxb_B 42 -IPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHLCQAVSKG 103 (112)
T ss_dssp -SCSEEEETTC-CEEEEEECCCSSCTTEEEEEETTSCCEEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred -CccceEEecCCEEEeeeccCCCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHhhcc
Confidence 12244555533222 22355678999999976 5899999999999999999999888653
No 36
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.73 E-value=1.4e-17 Score=149.30 Aligned_cols=94 Identities=14% Similarity=0.201 Sum_probs=76.4
Q ss_pred eeEeeeeeeccCCCCCCceeEEEEEecC--ceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcccc
Q 006831 178 TIKQGYLSKRSSNLRADWKRRFFVLDSR--GLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDE 255 (629)
Q Consensus 178 ~iKqGyL~Krs~~~~k~WkRRwFvL~~~--glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~ 255 (629)
.+++|||+|+++ .+.|+||||||.++ .+||||+++.+.
T Consensus 8 ~~~~G~L~k~~~--~~~WkkrWfVL~~~~~~~Ly~Yk~~~d~-------------------------------------- 47 (112)
T 2coc_A 8 SLLCGPLRLSES--GETWSEVWAAIPMSDPQVLHLQGGSQDG-------------------------------------- 47 (112)
T ss_dssp SSSEEEEEEESS--SSCEEEEEEECCTTCTTCEEEECCTTCS--------------------------------------
T ss_pred ceEEEEEEecCC--CCCceEEEEEEECCCccEEEEECCCCcc--------------------------------------
Confidence 356799999754 48899999999865 489999877552
Q ss_pred ccceeeEeecccceeec--CCCCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHH
Q 006831 256 KSVARHTVNLLTSTIKP--DADQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVI 313 (629)
Q Consensus 256 ~~~~~~~i~l~~~~vk~--~~d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI 313 (629)
.+.+.|.|..|+|.. ..+..+++|||+|+++.++|+|+|+|+++|++||.+|+.++
T Consensus 48 --~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~~~~~~y~f~A~s~e~~~~Wl~al~~A~ 105 (112)
T 2coc_A 48 --RLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWAKQSWYLSASSAELQQQWLETLSTAA 105 (112)
T ss_dssp --SSCSEECGGGCEEECCCSSSCCSSSEEEEEEETTEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred --CcceEEEcCCCEEEecCcccccCCCCEEEEecCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 234678888888874 23445678999999999999999999999999999999775
No 37
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=99.73 E-value=1.8e-17 Score=149.88 Aligned_cols=97 Identities=23% Similarity=0.446 Sum_probs=78.0
Q ss_pred cceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcccc
Q 006831 176 VQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDE 255 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~ 255 (629)
..++++|||+|+++. .+.|++|||||+ ++.|+||+++.+.
T Consensus 16 ~~~~~~G~L~K~g~~-~~~Wk~R~fvL~-~~~L~yy~~~~~~-------------------------------------- 55 (126)
T 1fao_A 16 SLGTKEGYLTKQGGL-VKTWKTRWFTLH-RNELKYFKDQMSP-------------------------------------- 55 (126)
T ss_dssp CTTCEEEEEEEECSS-SCCEEEEEEEEE-TTEEEEESSTTCS--------------------------------------
T ss_pred CCccEEEEEEEcCCC-CCCcccEEEEEE-CCEEEEeCCCCCC--------------------------------------
Confidence 356899999999764 588999999998 5668888766431
Q ss_pred ccceeeEeecccce-eecCCCCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHHHH
Q 006831 256 KSVARHTVNLLTST-IKPDADQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVIAS 315 (629)
Q Consensus 256 ~~~~~~~i~l~~~~-vk~~~d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI~~ 315 (629)
.+.+.|+|..|. +.+ .+...++|||.|++++|+|+|+|+|++|+.+||.+|+.+|..
T Consensus 56 --~~~g~i~L~~~~~v~~-~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 113 (126)
T 1fao_A 56 --EPIRILDLTECSAVQF-DYSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSQ 113 (126)
T ss_dssp --SCSEEEEGGGCCEEEE-ECSSSSSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred --CceeEEEccceEEEEe-cccCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 234567777666 443 234567899999999999999999999999999999999987
No 38
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=99.73 E-value=3e-17 Score=144.17 Aligned_cols=97 Identities=28% Similarity=0.398 Sum_probs=74.5
Q ss_pred cceeEeeeeeeccCCCCCCceeEEEEEecC-ceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccc
Q 006831 176 VQTIKQGYLSKRSSNLRADWKRRFFVLDSR-GLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHD 254 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~-glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d 254 (629)
..++++|||+|+++. .+.|++|||||+++ +.|+||+++.+.
T Consensus 5 ~~~~~~G~L~K~g~~-~~~Wk~R~fvL~~~~~~L~yyk~~~~~------------------------------------- 46 (109)
T 2i5f_A 5 GVIIKQGCLLKQGHR-RKNWKVRKFILREDPAYLHYYDPAGAE------------------------------------- 46 (109)
T ss_dssp CCEEEEEEEEEECTT-TCCEEEEEEEEETTTTEEEEECTTSCS-------------------------------------
T ss_pred CceeEEEEEEEcCCC-CCCceEEEEEEeCCCcEEEEECCCCCC-------------------------------------
Confidence 467999999999765 48899999999975 489999766431
Q ss_pred cccceeeEeecccceeecCCCC-----CCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHH
Q 006831 255 EKSVARHTVNLLTSTIKPDADQ-----SDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVI 313 (629)
Q Consensus 255 ~~~~~~~~i~l~~~~vk~~~d~-----~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI 313 (629)
.+.+.|+|..|.+....+. .++++||.|++++ ++|+|+|+|++|+++||.+|+.+|
T Consensus 47 ---~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 47 ---DPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp ---SCSEEEECTTCEEEEECC--------CCSEEEEECTTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred ---CccEEEECCCCEEEEccCCcccccCCCceEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 2345667766665332111 2378999999997 679999999999999999999887
No 39
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=99.73 E-value=2.8e-17 Score=148.68 Aligned_cols=99 Identities=21% Similarity=0.396 Sum_probs=78.0
Q ss_pred CcceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccc
Q 006831 175 KVQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHD 254 (629)
Q Consensus 175 ~~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d 254 (629)
...++++|||+|++....+.|+||||||+ ++.|+||+++.+.
T Consensus 18 ~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~-~~~L~yy~~~~~~------------------------------------- 59 (128)
T 2dkp_A 18 NAPVVRRGWLYKQDSTGMKLWKKRWFVLS-DLCLFYYRDEKEE------------------------------------- 59 (128)
T ss_dssp TSCCCEEEEEEEECCSSSCCEEEEEEEEE-TTEEEEESSTTCC-------------------------------------
T ss_pred CCCcEEEEEEEEeCCCCCCCceeEEEEEe-CCEEEEECCCCCc-------------------------------------
Confidence 34678999999998755689999999998 6778888766431
Q ss_pred cccceeeEeecccceeecCC--CCCCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 255 EKSVARHTVNLLTSTIKPDA--DQSDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 255 ~~~~~~~~i~l~~~~vk~~~--d~~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
.+.+.|+|..+.+.... +...++|||.|++++ ++|+|+|+|++|+++||.+|+.++.
T Consensus 60 ---~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 119 (128)
T 2dkp_A 60 ---GILGSILLPSFQIALLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAAL 119 (128)
T ss_dssp ---SEEEEECGGGSEEEECCGGGCCSSCSEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHS
T ss_pred ---ccceEEEcCceEEEEcCCcccCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 23456777666665432 223678999999986 9999999999999999999998863
No 40
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=99.73 E-value=2.4e-17 Score=145.97 Aligned_cols=104 Identities=25% Similarity=0.371 Sum_probs=71.8
Q ss_pred cceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcccc
Q 006831 176 VQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDE 255 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~ 255 (629)
..++++|||+|++.. .+.|++|||||+.++.|+||+++.+..+ .|.+
T Consensus 3 ~~~~~~G~L~K~g~~-~k~WkkR~fvL~~~~~L~yyk~~~~~~~-----------------------------~g~i--- 49 (112)
T 3aj4_A 3 MAFVKSGWLLRQSTI-LKRWKKNWFDLWSDGHLIYYDDQTRQNI-----------------------------EDKV--- 49 (112)
T ss_dssp CSCSEEEEEEEECSS-SCCEEEEEEEECTTSEEEEESSTTCCSE-----------------------------EEEE---
T ss_pred cceeEEEEEEeeCCC-CCCeeceEEEEeeCCEEEEEcCCCCCCC-----------------------------Cccc---
Confidence 457899999999774 4899999999965788999987754210 0000
Q ss_pred ccceeeEeecccc-eeec--CCCCCCCcceEEEeeC-CcEEEEEeCCHHHHHHHHHHHHHHH
Q 006831 256 KSVARHTVNLLTS-TIKP--DADQSDLRFCFRIISP-TKVYTLQAENTLDQMDWIEKINGVI 313 (629)
Q Consensus 256 ~~~~~~~i~l~~~-~vk~--~~d~~drrfcF~Iit~-~rty~LqAeSe~E~~~WI~aI~~aI 313 (629)
......|++..+ .+.. .++...++|||.|+++ .|+|+|+|+|++|+++||.+|+.++
T Consensus 50 -~l~~~~i~l~~~~~v~~v~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 110 (112)
T 3aj4_A 50 -HMPMDCINIRTGQECRDTQPPDGKSKDCMLQIVCRDGKTISLCAESTDDCLAWKFTLQDSR 110 (112)
T ss_dssp -EHHHHEEEEEEGGGCCSCCCSTTCCGGGEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred -cccccceeecccccccccCCCCCCCcCcEEEEEecCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 011122333322 1221 1233344799999977 6999999999999999999999876
No 41
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.73 E-value=1.3e-17 Score=150.56 Aligned_cols=105 Identities=20% Similarity=0.334 Sum_probs=79.0
Q ss_pred cceeEeeeeeeccCC-------CCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCcccccccccccccc
Q 006831 176 VQTIKQGYLSKRSSN-------LRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHY 248 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~-------~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~ 248 (629)
..+.++|||.|++.. .++.|++|||||++ +.|+||+++.+...+.
T Consensus 6 ~~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~-~~L~yyk~~~~~~~~~--------------------------- 57 (123)
T 1wjm_A 6 SGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRR-GSLGFYKDAKAASAGV--------------------------- 57 (123)
T ss_dssp CCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEET-TEEEEESSHHHHTTTC---------------------------
T ss_pred CCeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEEC-CEEEEEEcccccccCc---------------------------
Confidence 456899999998643 25899999999984 5688887664321000
Q ss_pred CCCccccccceeeEeecccceeecCCCCCCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHHH
Q 006831 249 HGGVHDEKSVARHTVNLLTSTIKPDADQSDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIAS 315 (629)
Q Consensus 249 ~g~v~d~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~~ 315 (629)
...+...|++..|.+.+..+...++|||+|++++ ++|+|||+|++||++||.+|+.+|..
T Consensus 58 -------~~~~~~~i~l~~~~~~~~~~~~~r~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~~ 118 (123)
T 1wjm_A 58 -------PYHGEVPVSLARAQGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIAS 118 (123)
T ss_dssp -------BSSSCCCEECTTCEEEECTTCSSCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred -------ccCCCceEEccCcEEeecccccCCCCEEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 0012245677767776655556789999999887 99999999999999999999999874
No 42
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.72 E-value=3.8e-17 Score=145.15 Aligned_cols=98 Identities=30% Similarity=0.504 Sum_probs=75.9
Q ss_pred CcceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccc
Q 006831 175 KVQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHD 254 (629)
Q Consensus 175 ~~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d 254 (629)
...++++|||+|++.. .+.|++|||||++ +.|+||+++.+.
T Consensus 5 ~~~~~~~G~L~K~g~~-~~~Wk~R~fvL~~-~~L~yy~~~~~~------------------------------------- 45 (118)
T 1v89_A 5 SSGPIKMGWLKKQRSI-VKNWQQRYFVLRA-QQLYYYKDEEDT------------------------------------- 45 (118)
T ss_dssp SSCEEEEEEEEEECSS-SSCEEEEEEEEET-TEEEEESSSSCC-------------------------------------
T ss_pred CCCCcEEEEEEecCCC-CCCccEEEEEEEC-CEEEEEeCCCCC-------------------------------------
Confidence 3468899999999765 5789999999995 578888766431
Q ss_pred cccceeeEeecccceeecCC--CCCCCcceEEEee--------CCcEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 255 EKSVARHTVNLLTSTIKPDA--DQSDLRFCFRIIS--------PTKVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 255 ~~~~~~~~i~l~~~~vk~~~--d~~drrfcF~Iit--------~~rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
.+.+.|+|..|++.... ....++|||+|++ +.++|+|+|+|++|+++||.+|+.+|.
T Consensus 46 ---~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 46 ---KPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp ---SCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ---CceEEEECCCCEEEEcCcCcccCCcceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 23355666666654221 2345689999998 679999999999999999999999986
No 43
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.72 E-value=2.2e-17 Score=146.89 Aligned_cols=98 Identities=22% Similarity=0.463 Sum_probs=73.3
Q ss_pred cceeEeeeeeeccCCCCCCceeEEEEEec-CceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccc
Q 006831 176 VQTIKQGYLSKRSSNLRADWKRRFFVLDS-RGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHD 254 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~~~k~WkRRwFvL~~-~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d 254 (629)
..++++|||+|+++. .+.|+||||||+. ++.|+||+++.+.
T Consensus 6 ~~~~~~G~L~K~g~~-~~~Wk~R~fvL~~~~~~L~yy~~~~~~------------------------------------- 47 (117)
T 1v5u_A 6 SGRSYEGILYKKGAF-MKPWKARWFVLDKTKHQLRYYDHRMDT------------------------------------- 47 (117)
T ss_dssp CSSSEEEEEEECCCS-SSCCEEEEEEEETTTTEEEEESSSSCS-------------------------------------
T ss_pred CCccEEEEEEecCCC-CCCceeeEEEEECCCCEEEEeecCCCC-------------------------------------
Confidence 456899999999776 5899999999985 5788888776542
Q ss_pred cccceeeEeeccccee-ecC------CCCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 255 EKSVARHTVNLLTSTI-KPD------ADQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 255 ~~~~~~~~i~l~~~~v-k~~------~d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
.+.+.|+|..+.+ .+. ++...++|||.|.++.|+|+|+|+|++|+++||.+|+.+|.
T Consensus 48 ---~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~ 111 (117)
T 1v5u_A 48 ---ECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSCLS 111 (117)
T ss_dssp ---SCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEESSCEEEEECSSHHHHHHHHHHHHTTCC
T ss_pred ---ccceEEEccCcEEEeecCccccccccCCCCeEEEEECCCceEEEECCCHHHHHHHHHHHHHHhc
Confidence 1223444444332 111 12345679999999999999999999999999999987653
No 44
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=6.9e-17 Score=144.85 Aligned_cols=98 Identities=23% Similarity=0.430 Sum_probs=76.2
Q ss_pred cceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcccc
Q 006831 176 VQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDE 255 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~ 255 (629)
..++++|||+|+++...+.|++|||||+ ++.|+||+++.+.
T Consensus 20 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~-~~~L~yy~~~~~~-------------------------------------- 60 (122)
T 2yry_A 20 APVTKAGWLFKQASSGVKQWNKRWFVLV-DRCLFYYKDEKEE-------------------------------------- 60 (122)
T ss_dssp CCEEEEEEEEEECCSSSCCEEEEEEEEE-TTEEEEESSTTCC--------------------------------------
T ss_pred CCccEEEEEEEECCCCCCCcEEEEEEEe-CCEEEEECCCCCC--------------------------------------
Confidence 4689999999998655689999999998 6778888776442
Q ss_pred ccceeeEeecccceeecC--CCCCCCcceEEEeeC-CcEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 256 KSVARHTVNLLTSTIKPD--ADQSDLRFCFRIISP-TKVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 256 ~~~~~~~i~l~~~~vk~~--~d~~drrfcF~Iit~-~rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
.+.+.|+|..+.+... .+...++|||.|+++ .++|+|+|+|++|+++||.+|+.++.
T Consensus 61 --~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 61 --SILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp --SCCEEEESTTCCCEECCTTCSCSSSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred --CcccEEEcCCCEEEEcCccccCCcccEEEEecCCCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 2335566666655432 133467899999866 59999999999999999999998873
No 45
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=99.72 E-value=3.4e-17 Score=147.59 Aligned_cols=96 Identities=25% Similarity=0.513 Sum_probs=76.8
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
.++++|||+|+++. .+.|++|||||+ ++.|+||+++.+.
T Consensus 4 ~~~~~G~L~K~g~~-~~~Wk~R~fvL~-~~~L~yy~~~~~~--------------------------------------- 42 (127)
T 1fgy_A 4 NPDREGWLLKLGGR-VKTWKRRWFILT-DNCLYYFEYTTDK--------------------------------------- 42 (127)
T ss_dssp SCSEEEEEEEECSS-SCCEEEEEEEEE-TTEEEEESSTTCS---------------------------------------
T ss_pred CCceEeEEEEECCC-CCCeEEEEEEEE-CCEEEEeCCCCCC---------------------------------------
Confidence 46899999999766 488999999998 5678888766431
Q ss_pred cceeeEeecccceeecCCCCCCCcceEEEeeCC----------------------cEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 257 SVARHTVNLLTSTIKPDADQSDLRFCFRIISPT----------------------KVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 257 ~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~----------------------rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
.+.+.|+|..|.+... ++..+++||.|++++ |+|+|+|+|++|+++||.+|+.+|.
T Consensus 43 -~~~g~i~L~~~~v~~~-~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~ 120 (127)
T 1fgy_A 43 -EPRGIIPLENLSIREV-LDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 120 (127)
T ss_dssp -SCSEEEECTTCEEEEE-CCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred -CcceEEECCceEEEEc-cCCCCCceEEEecCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhc
Confidence 2345677777766553 344778999999874 7999999999999999999999986
Q ss_pred H
Q 006831 315 S 315 (629)
Q Consensus 315 ~ 315 (629)
.
T Consensus 121 ~ 121 (127)
T 1fgy_A 121 R 121 (127)
T ss_dssp H
T ss_pred c
Confidence 4
No 46
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.72 E-value=3.1e-17 Score=146.07 Aligned_cols=95 Identities=17% Similarity=0.371 Sum_probs=73.8
Q ss_pred CcceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccc
Q 006831 175 KVQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHD 254 (629)
Q Consensus 175 ~~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d 254 (629)
...++++|||+|++....+.|+||||||+ ++.|+||+++.+.
T Consensus 5 ~~~~~~~G~L~K~~~~~~~~WkkR~fvL~-~~~L~yy~~~~~~------------------------------------- 46 (115)
T 2cod_A 5 SSGKVKSGWLDKLSPQGKRMFQKRWVKFD-GLSISYYNNEKEM------------------------------------- 46 (115)
T ss_dssp CSCCCEEEEEEECCSSSSSCCEEEEEEEC-SSEEEEEESSCCS-------------------------------------
T ss_pred CCCccEEEEEEEcCCCCCCCCceEEEEEE-CCEEEEEcCCCCc-------------------------------------
Confidence 34678999999998745689999999998 5678888776542
Q ss_pred cccceeeEeecccce-eecCCCCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHHHH
Q 006831 255 EKSVARHTVNLLTST-IKPDADQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVIAS 315 (629)
Q Consensus 255 ~~~~~~~~i~l~~~~-vk~~~d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI~~ 315 (629)
.+.+.|.|..+. |... + ++||.|++++|+|+|+|+|++|+++||.+|+.+|..
T Consensus 47 ---~~~g~i~l~~~~~v~~~----~-~~~F~i~~~~r~~~l~a~s~~e~~~Wi~~l~~~~~~ 100 (115)
T 2cod_A 47 ---YSKGIIPLSAISTVRVQ----G-DNKFEVVTTQRTFVFRVEKEEERNDWISILLNALKS 100 (115)
T ss_dssp ---SCCCEEETTTEEEEEEE----T-TTEEEEEESSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ---ccCCEEECCcceEEEeC----C-CCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 123445555442 3321 1 699999999999999999999999999999999854
No 47
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=99.72 E-value=1.3e-17 Score=150.75 Aligned_cols=104 Identities=19% Similarity=0.320 Sum_probs=73.8
Q ss_pred cceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcccc
Q 006831 176 VQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDE 255 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~ 255 (629)
..++++|||+|++.. .+.|+||||||++++.|+||+++.+..+ . |.+
T Consensus 6 ~~~~~~G~L~K~g~~-~k~WkkRwfvL~~~~~L~yy~~~~~~~~-~----------------------------g~i--- 52 (125)
T 1unq_A 6 VAIVKEGWLHKRGEY-IKTWRPRYFLLKNDGTFIGYKERPQDVD-Q----------------------------REA--- 52 (125)
T ss_dssp GCEEEEEEEEEECSS-SCCEEEEEEEEETTSEEEEESSCCCSHH-H----------------------------HTS---
T ss_pred CCeeEEeeEEeccCC-ccCccCcEEEEecCCEEEEEeCCCCCCC-C----------------------------cee---
Confidence 467899999999765 5899999999997788888887654200 0 000
Q ss_pred ccceeeEeecccceeecCCCCCCCcceEEEee----CCcEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006831 256 KSVARHTVNLLTSTIKPDADQSDLRFCFRIIS----PTKVYTLQAENTLDQMDWIEKINGVIASLL 317 (629)
Q Consensus 256 ~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit----~~rty~LqAeSe~E~~~WI~aI~~aI~~~l 317 (629)
....+.+..|.+.. .+..++|||.|++ +.++|+|+|+|++|+.+||.+|+.+|...-
T Consensus 53 ---~L~~~~~~~~~~~~--~~~~~~~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 113 (125)
T 1unq_A 53 ---PLNNFSVAQCQLMK--TERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLK 113 (125)
T ss_dssp ---CSEEEECTTCEEEE--ECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred ---EccceeEEeeeecc--cccCCCCEEEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHhhcc
Confidence 01112222222221 1235689999995 458999999999999999999999997654
No 48
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=99.72 E-value=3.4e-17 Score=148.61 Aligned_cols=100 Identities=27% Similarity=0.399 Sum_probs=77.7
Q ss_pred CcceeEeeeeeeccCCCCCCceeEEEEEecC-ceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcc
Q 006831 175 KVQTIKQGYLSKRSSNLRADWKRRFFVLDSR-GLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVH 253 (629)
Q Consensus 175 ~~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~-glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~ 253 (629)
...++++|||+|++.. .+.|++|||||+++ +.|+||+++.+.
T Consensus 15 ~~~~~~~G~L~K~g~~-~~~Wk~R~fvL~~~~~~L~yy~~~~~~------------------------------------ 57 (129)
T 1x05_A 15 RGVIIKQGCLLKQGHR-RKNWKVRKFILREDPAYLHYYDPAGAE------------------------------------ 57 (129)
T ss_dssp CSEEEEEEEEEECCSS-CCCCEEEEEEEEETTTEEEEECSSCCS------------------------------------
T ss_pred cCCceEEEEEEecCCC-CCCCeeEEEEEeCCCCEEEEECCCCCC------------------------------------
Confidence 3468999999999765 58899999999976 489999766431
Q ss_pred ccccceeeEeecccceeecCCCC-----CCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHHH
Q 006831 254 DEKSVARHTVNLLTSTIKPDADQ-----SDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIAS 315 (629)
Q Consensus 254 d~~~~~~~~i~l~~~~vk~~~d~-----~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~~ 315 (629)
.+.+.|+|..|.+....+. ..++|||.|++++ ++|+|+|+|++|+++||.+|+.+|..
T Consensus 58 ----~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~ 121 (129)
T 1x05_A 58 ----DPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMASRT 121 (129)
T ss_dssp ----SCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEECTTCCCCEEECSSHHHHHHHHHHHHHHHTC
T ss_pred ----cceeEEEccCCEEEEccCCccccccCCCeEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHc
Confidence 2346677776665432221 2378999999986 78999999999999999999999864
No 49
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.71 E-value=2.6e-17 Score=153.58 Aligned_cols=105 Identities=23% Similarity=0.332 Sum_probs=81.2
Q ss_pred CcceeEeeeeeeccC-----CCCCCceeEEEEEecC--c--eEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccc
Q 006831 175 KVQTIKQGYLSKRSS-----NLRADWKRRFFVLDSR--G--LLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLS 245 (629)
Q Consensus 175 ~~~~iKqGyL~Krs~-----~~~k~WkRRwFvL~~~--g--lLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~ 245 (629)
...++++|||+|++. ...+.|+||||||+++ | .|+||+++...
T Consensus 15 ~~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~---------------------------- 66 (150)
T 1wg7_A 15 KGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKIS---------------------------- 66 (150)
T ss_dssp SCCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCS----------------------------
T ss_pred CCCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCCC----------------------------
Confidence 346789999999974 2347899999999864 2 78888765421
Q ss_pred cccCCCccccccceeeEeecccceeecCCCCCCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHHHHhcc
Q 006831 246 SHYHGGVHDEKSVARHTVNLLTSTIKPDADQSDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIASLLSF 319 (629)
Q Consensus 246 ~~~~g~v~d~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~~~l~~ 319 (629)
..+.+.|+|..|.+... +...++|||.|++++ |+|+|+|+|++|+.+||.+|+.+|......
T Consensus 67 -----------~~~~g~I~L~~~~~~~~-~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~~~~~~ 129 (150)
T 1wg7_A 67 -----------KEPKGSIFLDSCMGVVQ-NNKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILNKILQLNFEA 129 (150)
T ss_dssp -----------SCCSEEECTTTCCEECC-CCSSCTTEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------CCcCcEEecccCEEEec-CCCCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHHhhhHH
Confidence 12346677777776653 334678999999996 999999999999999999999999766543
No 50
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=6.5e-17 Score=143.79 Aligned_cols=97 Identities=24% Similarity=0.436 Sum_probs=75.2
Q ss_pred cceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcccc
Q 006831 176 VQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDE 255 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~ 255 (629)
..++++|||+|+++...+.|++|||||+ ++.|+||+++.+.
T Consensus 9 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~-~~~L~yy~~~~~~-------------------------------------- 49 (117)
T 2d9y_A 9 APVTKAGWLFKQASSGVKQWNKRWFVLV-DRCLFYYKDEKEE-------------------------------------- 49 (117)
T ss_dssp CCCCEEEEEEEECTTSSSCEEEEEEEEE-TTEEEEESSTTCC--------------------------------------
T ss_pred CCeeEEEEEEEeCCCCCCCceEEEEEEC-CCEEEEECCCCCC--------------------------------------
Confidence 4678999999998555689999999998 5778888766432
Q ss_pred ccceeeEeecccceeecC--CCCCCCcceEEEeeC-CcEEEEEeCCHHHHHHHHHHHHHHH
Q 006831 256 KSVARHTVNLLTSTIKPD--ADQSDLRFCFRIISP-TKVYTLQAENTLDQMDWIEKINGVI 313 (629)
Q Consensus 256 ~~~~~~~i~l~~~~vk~~--~d~~drrfcF~Iit~-~rty~LqAeSe~E~~~WI~aI~~aI 313 (629)
.+.+.|+|..+.+... .+...++|||.|+++ .++|+|+|+|++|+++||.+|+.++
T Consensus 50 --~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~ 108 (117)
T 2d9y_A 50 --SILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAA 108 (117)
T ss_dssp --SCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHTT
T ss_pred --CcCCEEEeCCeEEEEcCccccCCCccEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 2345666666655432 133567899999865 5999999999999999999999776
No 51
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.70 E-value=3.1e-17 Score=143.06 Aligned_cols=94 Identities=24% Similarity=0.447 Sum_probs=74.3
Q ss_pred EeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccccce
Q 006831 180 KQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEKSVA 259 (629)
Q Consensus 180 KqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~~~~ 259 (629)
++|||+|+++. .+.|++|||||+ ++.|+||+++.+.. ..+
T Consensus 1 ~eG~L~K~g~~-~k~Wk~R~fvL~-~~~L~Yy~~~~~~~--------------------------------------~~~ 40 (103)
T 3rcp_A 1 MEGVLYKWTNY-LTGWQPRWFVLD-NGILSYYDSQDDVC--------------------------------------KGS 40 (103)
T ss_dssp CEEEEEEECCT-TTCEEEEEEEEE-TTEEEEESSCC-----------------------------------------CCC
T ss_pred CceEEEEccCC-CCCeeceEEEEE-CCEEEEEecCCccc--------------------------------------CCc
Confidence 37999999765 489999999998 68899998775420 113
Q ss_pred eeEeecccceeecCCCCCCCcceEEEeeC-CcEEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006831 260 RHTVNLLTSTIKPDADQSDLRFCFRIISP-TKVYTLQAENTLDQMDWIEKINGVIASL 316 (629)
Q Consensus 260 ~~~i~l~~~~vk~~~d~~drrfcF~Iit~-~rty~LqAeSe~E~~~WI~aI~~aI~~~ 316 (629)
.+.|+|..|.+.+.++ .+++|.|+++ .++|+|+|+|++|+++||.+|+.++..+
T Consensus 41 ~g~i~L~~~~v~~~~~---~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~~ 95 (103)
T 3rcp_A 41 KGSIKMAVCEIKVHSA---DNTRMELIIPGEQHFYMKAVNAAERQRWLVALGSSKASL 95 (103)
T ss_dssp SCEEEGGGCEEECCTT---CSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHTTSCCC
T ss_pred ccEEEeeeeEEEEcCC---CCceEEEEeCCCCEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 4667777788776432 4789999998 6999999999999999999999887543
No 52
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=99.70 E-value=9.5e-17 Score=153.13 Aligned_cols=101 Identities=19% Similarity=0.334 Sum_probs=72.1
Q ss_pred CcceeEeeeeeeccCCC----CCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCC
Q 006831 175 KVQTIKQGYLSKRSSNL----RADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHG 250 (629)
Q Consensus 175 ~~~~iKqGyL~Krs~~~----~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g 250 (629)
...++++|||+||+.+. .++||||||||+ ++.|+||+++.+..
T Consensus 12 ~~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~-~~~L~Yyk~~~~~~-------------------------------- 58 (164)
T 2lul_A 12 NFNTILEEILIKRSQQKKKTSPLNYKERLFVLT-KSMLTYYEGRAEKK-------------------------------- 58 (164)
T ss_dssp CSSEEEEEEEEEECCCCSSSCCCCEEEEEEEEE-SSEEEEECCCSSSC--------------------------------
T ss_pred CCCeeEEEEEEEecCCCCCCCCCCceeEEEEEE-CCEEEEEeccCccc--------------------------------
Confidence 34689999999998652 357999999998 45678887654321
Q ss_pred CccccccceeeEeecccce-eec-C----CCCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHHHH
Q 006831 251 GVHDEKSVARHTVNLLTST-IKP-D----ADQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVIAS 315 (629)
Q Consensus 251 ~v~d~~~~~~~~i~l~~~~-vk~-~----~d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI~~ 315 (629)
.+.+.|+|..+. +.. . .....+.++|.|++++|+|+|+|+|++|+++||++|+.+|..
T Consensus 59 -------~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i~~ 122 (164)
T 2lul_A 59 -------YRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQVVHDANTLYIFAPSPQSRDLWVKKLKEEIKN 122 (164)
T ss_dssp -------CCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred -------ccccEEEEeeeEEEEeccccccCcccccceeEEEecCCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 111233333221 111 1 112346799999999999999999999999999999999863
No 53
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.70 E-value=3.1e-17 Score=148.78 Aligned_cols=100 Identities=28% Similarity=0.456 Sum_probs=75.0
Q ss_pred cceeEeeeeeeccCCCCCCceeEEEEEecC-ceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccc
Q 006831 176 VQTIKQGYLSKRSSNLRADWKRRFFVLDSR-GLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHD 254 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~-glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d 254 (629)
..++++|||+|++.. .+.|+||||||+++ +.|+||+++...
T Consensus 16 ~~~~~~G~L~K~g~~-~~~Wk~R~fvL~~d~~~L~yy~~~~~~------------------------------------- 57 (129)
T 1x1g_A 16 GTVVKQGYLAKQGHK-RKNWKVRRFVLRKDPAFLHYYDPSKEE------------------------------------- 57 (129)
T ss_dssp SEEEEEEEEEEECSS-SSSEEEEEEEEEESSCEEEEECSSSCC-------------------------------------
T ss_pred CCEEEEEEEEEECCC-CCCeeeEEEEEeCCCCeEEEeCCCCcC-------------------------------------
Confidence 368999999999766 58999999999964 789999875211
Q ss_pred cccceeeEeecccceeecCCCC--------CCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHHH
Q 006831 255 EKSVARHTVNLLTSTIKPDADQ--------SDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIAS 315 (629)
Q Consensus 255 ~~~~~~~~i~l~~~~vk~~~d~--------~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~~ 315 (629)
..+.+.|+|..|.+....+. ..++|||.|++++ ++|+|+|+|++|+++||.+|+.+|..
T Consensus 58 --~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 125 (129)
T 1x1g_A 58 --NRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKLTSG 125 (129)
T ss_dssp --SSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCEEECCTTCCCEEECCSSHHHHHHHHHHHHHHSSS
T ss_pred --CccceEEECcCCEEEEeCCCCCcccccCCCCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 11234455555554432111 1168999999997 78999999999999999999988743
No 54
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=99.70 E-value=6.7e-17 Score=150.72 Aligned_cols=102 Identities=24% Similarity=0.539 Sum_probs=77.2
Q ss_pred cceeEeeeeeeccCC---CCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCc
Q 006831 176 VQTIKQGYLSKRSSN---LRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGV 252 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~---~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v 252 (629)
..++++|||+|++.. ..+.|+||||||+ ++.|+||+++...
T Consensus 15 ~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~-~~~L~yyk~~~~~----------------------------------- 58 (148)
T 1u5f_A 15 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALS-KTVFYYYGSDKDK----------------------------------- 58 (148)
T ss_dssp SSEEEEEEEEEECCCSSCSSCSEEEEEEEEE-TTEEEEESSTTCS-----------------------------------
T ss_pred CCccEEEEEEEeCCCCCCcCCCceeEEEEEE-CCEEEEEcCCCCc-----------------------------------
Confidence 367899999999864 3479999999998 5778888766431
Q ss_pred cccccceeeEeecccceeecCC---CCCCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHHHHhc
Q 006831 253 HDEKSVARHTVNLLTSTIKPDA---DQSDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIASLLS 318 (629)
Q Consensus 253 ~d~~~~~~~~i~l~~~~vk~~~---d~~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~~~l~ 318 (629)
.+.+.|.|..+++...+ ....++|||.|++++ |+|+|+|+|++|+++||.+|+.+|..+-+
T Consensus 59 -----~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~~ 123 (148)
T 1u5f_A 59 -----QQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQDLGS 123 (148)
T ss_dssp -----SCSEEEECTTCEEEECTTSCSSTTGGGEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHCC----
T ss_pred -----ccceEEEcCCcEEEECCCcccCCCCccEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHhcC
Confidence 23456667666665432 234557999999998 99999999999999999999999865543
No 55
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=99.69 E-value=7.8e-17 Score=144.97 Aligned_cols=99 Identities=23% Similarity=0.453 Sum_probs=74.9
Q ss_pred cceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcccc
Q 006831 176 VQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDE 255 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~ 255 (629)
..++++|||+|++.. .+.|++|||||+ ++.|+||+++.+.
T Consensus 12 ~~~~~~G~L~K~g~~-~~~Wk~R~fvL~-~~~L~yy~~~~~~-------------------------------------- 51 (125)
T 1eaz_A 12 SAVIKAGYCVKQGAV-MKNWKRRYFQLD-ENTIGYFKSELEK-------------------------------------- 51 (125)
T ss_dssp CCCSEEEEEEEECTT-TCCEEEEEEEEC-SSEEEEESSTTCS--------------------------------------
T ss_pred CCccEEEEEEEeCCC-CCCcceEEEEEe-CCEEEEEcCCCCC--------------------------------------
Confidence 467899999999764 588999999998 5678888766432
Q ss_pred ccceeeEeecccce-eecCC--CCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006831 256 KSVARHTVNLLTST-IKPDA--DQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVIASL 316 (629)
Q Consensus 256 ~~~~~~~i~l~~~~-vk~~~--d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI~~~ 316 (629)
.+.+.|.|..+. +.... +...++|||.|++++|+|+|+|+|++|+++||.+|+.+|...
T Consensus 52 --~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~W~~al~~~i~~~ 113 (125)
T 1eaz_A 52 --EPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQ 113 (125)
T ss_dssp --SCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred --cceeEEEcccceEEeeccccccCCcCCEEEEEeCCcEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 123445555443 22211 123568999999999999999999999999999999999754
No 56
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=99.69 E-value=4.4e-17 Score=161.78 Aligned_cols=99 Identities=22% Similarity=0.550 Sum_probs=77.7
Q ss_pred cceeEeeeeeeccCC---CCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCc
Q 006831 176 VQTIKQGYLSKRSSN---LRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGV 252 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~---~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v 252 (629)
..++++|||+|+++. .++.|+||||||+ ++.|+||+++...
T Consensus 104 ~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~-~~~L~Yyk~~~~~----------------------------------- 147 (211)
T 1u5e_A 104 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALS-KTVFYYYGSDKDK----------------------------------- 147 (211)
T ss_dssp SSEEEEEEEEEEEHHHHTTTCCCEEEEEEEE-TTEEEEESSTTCS-----------------------------------
T ss_pred CCccEEEEEEEECCCCCcCCCCcEeEEEEEE-CCEEEEEcCCCCc-----------------------------------
Confidence 458999999999864 4579999999998 5678888776542
Q ss_pred cccccceeeEeecccceeecCC---CCCCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHHH
Q 006831 253 HDEKSVARHTVNLLTSTIKPDA---DQSDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIAS 315 (629)
Q Consensus 253 ~d~~~~~~~~i~l~~~~vk~~~---d~~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~~ 315 (629)
.+.+.|.|..+.+...+ ....++|||.|++++ |+|+|+|+|++|+.+||.+|+.+|..
T Consensus 148 -----~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~aL~~ai~~ 209 (211)
T 1u5e_A 148 -----QQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQD 209 (211)
T ss_dssp -----SCSEEEECTTCEEEECGGGCSSTTGGGEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred -----cceEEEEeCCcEEEEcCCccccCCCCCEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 23355666666554422 233567999999996 99999999999999999999999975
No 57
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=99.69 E-value=7.1e-17 Score=141.01 Aligned_cols=98 Identities=17% Similarity=0.343 Sum_probs=72.3
Q ss_pred EeeeeeeccC-------CCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCc
Q 006831 180 KQGYLSKRSS-------NLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGV 252 (629)
Q Consensus 180 KqGyL~Krs~-------~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v 252 (629)
++|||+|++. ...+.|++|||||+ ++.|+||+++.+...+
T Consensus 1 ~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~-~~~L~yyk~~~~~~~~-------------------------------- 47 (106)
T 1btn_A 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVIN-NQEMGFYKDAKSAASG-------------------------------- 47 (106)
T ss_dssp CEEEEEEEEEECSTTCBCSCCCCEEEEEEEE-TTEEEEESSHHHHHHT--------------------------------
T ss_pred CccEEEEEEEEeCCCccCCCCChhEEEEEEE-CCEEEEEeCCcccccC--------------------------------
Confidence 4899999971 24589999999998 5678888765421000
Q ss_pred cccccceeeEeecccceeecCCCCCCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHH
Q 006831 253 HDEKSVARHTVNLLTSTIKPDADQSDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGV 312 (629)
Q Consensus 253 ~d~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~a 312 (629)
....+...|++..|.+.+.++...++|||+|++++ ++|+|+|+|++|+.+||.+|+.|
T Consensus 48 --~~~~~~~~i~l~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 48 --IPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp --CCSSSCCCEECTTCEEEECSSCCSSSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred --CCCCCcceEECCCCEEEEcccccCCccEEEEEecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 00012345677777666555666789999999887 99999999999999999999863
No 58
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.69 E-value=7e-17 Score=146.80 Aligned_cols=101 Identities=16% Similarity=0.248 Sum_probs=75.8
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCC-----CCCcCCCcccccCCCCCCccccccccccccccCCC
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWS-----WNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGG 251 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~-----~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~ 251 (629)
.++|+|||+|++.. .+.|++|||||+++ .||||+++.. .|.|
T Consensus 11 ~~~k~G~L~K~g~~-~k~Wk~RwfVL~~~-~L~yyk~~~~~~~e~~plg------------------------------- 57 (124)
T 2w2x_D 11 EHKQQGELYMWDSI-DQKWTRHFCAIADA-KLSFSDDIEQTMEEDNPLG------------------------------- 57 (124)
T ss_dssp --CCEEEEEEEETT-TTEEEEEEEEEETT-EEEEEEEHHHHHHCSSCCC-------------------------------
T ss_pred hcceeEEEEEECCC-CCCceEeEEEEECC-EEEEEcccccccccccccC-------------------------------
Confidence 56899999999765 48899999999955 4777775421 1100
Q ss_pred ccccccceeeEeecccceeecCCCC-CCCcceEEEeeCC---cEEEEEeCCHHHHHHHHHHHHHHHHH
Q 006831 252 VHDEKSVARHTVNLLTSTIKPDADQ-SDLRFCFRIISPT---KVYTLQAENTLDQMDWIEKINGVIAS 315 (629)
Q Consensus 252 v~d~~~~~~~~i~l~~~~vk~~~d~-~drrfcF~Iit~~---rty~LqAeSe~E~~~WI~aI~~aI~~ 315 (629)
+...+.|+|..|++...++. ..++|+|+|.++. ++|+|+|+|++|+.+||.+|+.++.+
T Consensus 58 -----~~~~G~I~L~~~~v~~~~~~~~~k~~~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~ 120 (124)
T 2w2x_D 58 -----SLCRGILDLNTYNVVKAPQGKNQKSFVFILEPKQQGDPPVEFATDKVEELFEWFQSIREITWK 120 (124)
T ss_dssp -----CSCSEEEEGGGEEEEECTTCBTTBSEEEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHC-
T ss_pred -----CccccEEECCCCEEEEccCCcCCCCEEEEEECCCCCCceEEEEECCHHHHHHHHHHHHHHHHh
Confidence 12357788888888764332 4678999999874 78999999999999999999998854
No 59
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=99.68 E-value=1.3e-16 Score=144.69 Aligned_cols=97 Identities=18% Similarity=0.343 Sum_probs=75.6
Q ss_pred eeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcccccc
Q 006831 178 TIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEKS 257 (629)
Q Consensus 178 ~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~~ 257 (629)
++++|||.||+.. .+.|++|||||+++ .|+||+++.... | .
T Consensus 6 ~~k~G~L~Kk~~~-~k~W~~rwfVL~~~-~L~yyK~~~~~~-----------------------------------d--~ 46 (120)
T 4a6h_A 6 EIKSGFLERRSKF-LKSYSKGYYVLTPN-FLHEFKTADRKK-----------------------------------D--L 46 (120)
T ss_dssp CSEEEEEEEEETT-TTEEEEEEEEECSS-EEEEESSCCTTT-----------------------------------C--C
T ss_pred ccEEEEEEEcCCC-CCCCccEEEEEeCC-EEEEEcCCCcCc-----------------------------------C--C
Confidence 7899999999874 58999999999976 788887654210 1 2
Q ss_pred ceeeEeecccceeecCCCCCC--------CcceEEEeeCC-------cEEEEEeCCHHHHHHHHHHHHHHH
Q 006831 258 VARHTVNLLTSTIKPDADQSD--------LRFCFRIISPT-------KVYTLQAENTLDQMDWIEKINGVI 313 (629)
Q Consensus 258 ~~~~~i~l~~~~vk~~~d~~d--------rrfcF~Iit~~-------rty~LqAeSe~E~~~WI~aI~~aI 313 (629)
.+.+.|.|..|+|....+... +.++|.|.+++ ++|+|+|+|.+||++||++|+.++
T Consensus 47 ~P~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 47 VPVMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp SCSEEEEGGGEEEEEECCCCC---------CCEEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred CceEEEECCCCEEEEcccccccccccccCCCcEEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 345778888898876433322 67899998776 599999999999999999999875
No 60
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=99.68 E-value=8e-17 Score=146.96 Aligned_cols=101 Identities=25% Similarity=0.428 Sum_probs=75.0
Q ss_pred ceeEeeeeeec--cCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccc
Q 006831 177 QTIKQGYLSKR--SSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHD 254 (629)
Q Consensus 177 ~~iKqGyL~Kr--s~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d 254 (629)
.++++|||+|+ ++. .+.|+||||||+ ++.|+||+.+.+.
T Consensus 4 ~v~~~G~L~K~~~~~~-~~~WkrRwfvL~-~~~L~yyk~~~d~------------------------------------- 44 (134)
T 2y7b_A 4 SVEERGFLTIFEDVSG-FGAWHRRWCVLS-GNCISYWTYPDDE------------------------------------- 44 (134)
T ss_dssp CCCEEEEEEEEEEETT-EEEEEEEEEEEE-TTEEEEESSHHHH-------------------------------------
T ss_pred CceEEeeEEEEcCCCC-CCCcEEEEEEEE-CCEEEEECCCCcc-------------------------------------
Confidence 56899999999 544 478999999998 5678888754321
Q ss_pred cccceeeEeecccce---eecCCC-CCCCcceEEEee--CC------------------cEEEEEeCCHHHHHHHHHHHH
Q 006831 255 EKSVARHTVNLLTST---IKPDAD-QSDLRFCFRIIS--PT------------------KVYTLQAENTLDQMDWIEKIN 310 (629)
Q Consensus 255 ~~~~~~~~i~l~~~~---vk~~~d-~~drrfcF~Iit--~~------------------rty~LqAeSe~E~~~WI~aI~ 310 (629)
....+.+.|+|..|. |.+.++ ...++|||+|++ |. ++|+|+|+|++|+.+||.+|+
T Consensus 45 ~~~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~ 124 (134)
T 2y7b_A 45 KRKNPIGRINLANCTSRQIEPANREFCARRNTFELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLN 124 (134)
T ss_dssp TTSCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHH
T ss_pred cccCceEEEEhhhCccccccccchhhccCCCEEEEEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHH
Confidence 001234667777776 343222 135789999998 43 479999999999999999999
Q ss_pred HHHHHH
Q 006831 311 GVIASL 316 (629)
Q Consensus 311 ~aI~~~ 316 (629)
.+|..+
T Consensus 125 ~~i~~~ 130 (134)
T 2y7b_A 125 QVLVDI 130 (134)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999754
No 61
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=99.67 E-value=1.4e-16 Score=152.82 Aligned_cols=101 Identities=16% Similarity=0.311 Sum_probs=69.3
Q ss_pred ceeEeeeeeeccCC----CCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCc
Q 006831 177 QTIKQGYLSKRSSN----LRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGV 252 (629)
Q Consensus 177 ~~iKqGyL~Krs~~----~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v 252 (629)
.++|+|||+|++.+ .++.||+|||||++ +.|+||+++.+..
T Consensus 2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~-~~L~Yyk~~~~~~---------------------------------- 46 (169)
T 1btk_A 2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLTV-HKLSYYEYDFERG---------------------------------- 46 (169)
T ss_dssp CCCEEEEEEEECCCSSTTCCCCEEEEEEEECS-SEEEEEEEETTTT----------------------------------
T ss_pred ceEEEEEEEEecCCCCCcccCCCceEEEEEcC-CEEEEEecCCccC----------------------------------
Confidence 36899999998743 24789999999985 5678887632100
Q ss_pred cccccceeeEeecccce-eecC---CC-CCCC---------------------cceEEEeeCCcEEEEEeCCHHHHHHHH
Q 006831 253 HDEKSVARHTVNLLTST-IKPD---AD-QSDL---------------------RFCFRIISPTKVYTLQAENTLDQMDWI 306 (629)
Q Consensus 253 ~d~~~~~~~~i~l~~~~-vk~~---~d-~~dr---------------------rfcF~Iit~~rty~LqAeSe~E~~~WI 306 (629)
....+.+.|.|..+. +... .+ ...+ +|+|+|++++|+|+|+|+|++|+++||
T Consensus 47 --~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~F~I~t~~rt~yl~A~s~~E~~eWi 124 (169)
T 1btk_A 47 --RRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWI 124 (169)
T ss_dssp --EEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHH
T ss_pred --CCCceeeEEECcceEEEEeccCCCCcchhcccccccCcccccccccccccccccEEEEeCCceEEEEcCCHHHHHHHH
Confidence 001233445544332 1111 00 1111 289999999999999999999999999
Q ss_pred HHHHHHHH
Q 006831 307 EKINGVIA 314 (629)
Q Consensus 307 ~aI~~aI~ 314 (629)
.+|+.+|.
T Consensus 125 ~aI~~~i~ 132 (169)
T 1btk_A 125 HQLKNVIR 132 (169)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99999985
No 62
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=99.66 E-value=2.3e-16 Score=150.21 Aligned_cols=99 Identities=21% Similarity=0.351 Sum_probs=68.8
Q ss_pred eeEeeeeee----------ccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccc
Q 006831 178 TIKQGYLSK----------RSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSH 247 (629)
Q Consensus 178 ~iKqGyL~K----------rs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~ 247 (629)
++++|||++ ++ ...+.|++|||||+ ++.|+||+++.+...
T Consensus 3 v~~eG~L~~k~~~~~~gkK~g-~~~k~WkkRwfvL~-~~~L~yyk~~~~~~~---------------------------- 52 (168)
T 2j59_M 3 AAKEGWLHFRPLVTDKGKRVG-GSIRPWKQMYVVLR-GHSLYLYKDKREQTT---------------------------- 52 (168)
T ss_dssp CCEEEEEEEEECC-------------CCEEEEEEEE-TTEEEEESCTTCC------------------------------
T ss_pred CcEEEEEeeeeecccCCcccC-CCCCCceEEEEEEe-CCEEEEEECCccccc----------------------------
Confidence 579999994 33 34588999999998 567888877643100
Q ss_pred cCCCccccccceeeEeecccceeecCCCCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 248 YHGGVHDEKSVARHTVNLLTSTIKPDADQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 248 ~~g~v~d~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
.......|.+..|.+.+..+...++|||+|++++++|+|+|+|++|+++||.+|+.++.
T Consensus 53 --------~~~g~i~l~~~~~~~~~~~~~~~~~~~F~I~t~~r~~~l~A~s~~e~~~Wi~ai~~~~~ 111 (168)
T 2j59_M 53 --------PSEEEQPISVNACLIDISYSETKRKNVFRLTTSDCECLFQAEDRDDMLAWIKTIQESSN 111 (168)
T ss_dssp --------------CEECSSCEEEECSSSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred --------ccCCceEecccceEEEeccccCCCCCEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHh
Confidence 00111224444465554445567899999999999999999999999999999998874
No 63
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=99.66 E-value=1.1e-16 Score=144.65 Aligned_cols=106 Identities=14% Similarity=0.359 Sum_probs=76.8
Q ss_pred ceeEeeeeeeccCC-------CCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccC
Q 006831 177 QTIKQGYLSKRSSN-------LRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYH 249 (629)
Q Consensus 177 ~~iKqGyL~Krs~~-------~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~ 249 (629)
.+.|+|||.|+... .++.|++|||||++ +.|+||+++.+....
T Consensus 7 ~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~~-~~L~~yk~~~~~~~~----------------------------- 56 (122)
T 1dro_A 7 GEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKA-GRISFYKDQKGYKSN----------------------------- 56 (122)
T ss_dssp SSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESS-SCCBEESSSSHHHHC-----------------------------
T ss_pred ceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEEC-CEEEEEeCCcccccC-----------------------------
Confidence 56799999987431 35899999999985 557777766542100
Q ss_pred CCccccccceeeEeecccceeecCCCCCCCcceEEEeeC-CcEEEEEeCCHHHHHHHHHHHHHHHHH
Q 006831 250 GGVHDEKSVARHTVNLLTSTIKPDADQSDLRFCFRIISP-TKVYTLQAENTLDQMDWIEKINGVIAS 315 (629)
Q Consensus 250 g~v~d~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~-~rty~LqAeSe~E~~~WI~aI~~aI~~ 315 (629)
+.+. ..+...|+|..|.+.+..+...++|||+|+++ .++|+|||+|++||++||.+|+.+|..
T Consensus 57 ~~~~---~~~~~~i~L~~~~v~~~~d~~kr~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i~~ 120 (122)
T 1dro_A 57 PELT---FRGEPSYDLQNAAIEIASDYTKKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSDS 120 (122)
T ss_dssp TTCC---SSCCCBCCCSSCCCEECCSSSSSTTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHTC
T ss_pred CCcc---cCCCceEECCCCEEEeCCCCCCCCeEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 0000 01124567777777765566678999999974 599999999999999999999999864
No 64
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=99.65 E-value=7.3e-16 Score=138.78 Aligned_cols=95 Identities=14% Similarity=0.229 Sum_probs=71.1
Q ss_pred ceeEeeeeeeccCCCCC-CceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcccc
Q 006831 177 QTIKQGYLSKRSSNLRA-DWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDE 255 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k-~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~ 255 (629)
.++|.|||+|+.++..+ +||+|||||++ ..|+||++..+.
T Consensus 11 ~VirkGWL~k~~~g~~k~~wk~rWFVLt~-~~L~yyKd~~ek-------------------------------------- 51 (125)
T 1dyn_A 11 LVIRKGWLTINNIGIMKGGSKEYWFVLTA-ENLSWYKDDEEK-------------------------------------- 51 (125)
T ss_dssp CEEEEEEEEESCCCGGGTSSEEEEEEEES-SEEEEESSTTCS--------------------------------------
T ss_pred ceEEEEEEEEecCccccCCceeeEEEEec-cceeeecCCccc--------------------------------------
Confidence 47999999996455445 59999999995 557778776542
Q ss_pred ccceeeEeecccceeecCCC-CCCCcceEEEeeCC--------cEEEEEeCCHHHHHHHHHHHHHH
Q 006831 256 KSVARHTVNLLTSTIKPDAD-QSDLRFCFRIISPT--------KVYTLQAENTLDQMDWIEKINGV 312 (629)
Q Consensus 256 ~~~~~~~i~l~~~~vk~~~d-~~drrfcF~Iit~~--------rty~LqAeSe~E~~~WI~aI~~a 312 (629)
.+.+.|.|....++.... ...++|||+|.+++ ++|.|.|+|.+|+++||++|.+|
T Consensus 52 --e~~G~IpL~~~~vr~v~~~~~~rk~~F~l~~~d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra 115 (125)
T 1dyn_A 52 --EKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRA 115 (125)
T ss_dssp --CEEEEEECTTEEEEECCSCSSSSCEEEEEEETTSSCSSTTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred --ccceEEECCCceEeccCCCCCCCceEEEEECCCCccccccceEEEEeCCCHHHHHHHHHHHHhC
Confidence 234566666666654221 12678999999876 49999999999999999999543
No 65
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=99.64 E-value=1e-15 Score=139.12 Aligned_cols=110 Identities=21% Similarity=0.300 Sum_probs=78.1
Q ss_pred cceeEeeeeeec-----cCCCC-CCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccC
Q 006831 176 VQTIKQGYLSKR-----SSNLR-ADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYH 249 (629)
Q Consensus 176 ~~~iKqGyL~Kr-----s~~~~-k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~ 249 (629)
..+.|+|||.++ +++.+ +.|++|||||++ +.|+||+++.....+. . +.
T Consensus 6 ~~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~~-~~L~~yKd~~~~~~~~-~------------------------~~ 59 (124)
T 3pp2_A 6 KTLDKAGVLHRTKTADKGKRLRKKHWSASWTVLEG-GVLTFFKDSKTSAAGG-L------------------------RQ 59 (124)
T ss_dssp ---CEEEEEEEEEEEETTEECSSCCCEEEEEEEET-TEEEEESCSBCC---C-B------------------------CC
T ss_pred CcEEEEEEEEEEEeccCCccCCCCCceEEEEEEEC-CEEEEEecCccccccC-c------------------------cC
Confidence 357899999987 33333 589999999985 5678887664421000 0 00
Q ss_pred CCccccccceeeEeecccceeecCC-CCCCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 250 GGVHDEKSVARHTVNLLTSTIKPDA-DQSDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 250 g~v~d~~~~~~~~i~l~~~~vk~~~-d~~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
+ .....+...|+|..|.+.+.+ +...++|+|+|.+++ ++|+|||+|++||.+||.+|+.+|+
T Consensus 60 ~---~~~~~~~~~i~L~~a~v~~~~~d~~krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 60 P---SKFSTPEYTVELRGATLSWAPKDKSSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp G---GGGCSEEEEEECTTCEEEECCGGGCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred c---ccccCCcceEEcCCCEEEecccccCCCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 0 000134577888888888764 667789999999876 7999999999999999999999985
No 66
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=99.62 E-value=2.2e-15 Score=154.34 Aligned_cols=107 Identities=22% Similarity=0.378 Sum_probs=79.2
Q ss_pred cceeEeeeee-------eccCCC----CCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCcccccccccc
Q 006831 176 VQTIKQGYLS-------KRSSNL----RADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWL 244 (629)
Q Consensus 176 ~~~iKqGyL~-------Krs~~~----~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~ 244 (629)
..++|+|||+ ++.+.. ++.|++|||||+++ .|+||+++.....
T Consensus 9 ~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~~~-~L~yyK~~~~~~~------------------------- 62 (263)
T 3a8p_A 9 GVVRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGC-TLLFYETYGKNST------------------------- 62 (263)
T ss_dssp -CEEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEETT-EEEEESSCCC----------------------------
T ss_pred CCeEEEEEeeecccccccCCCCccCccCCCceEEEEEEcCC-EEEEEecCccccc-------------------------
Confidence 4679999999 233333 68999999999954 6788876532100
Q ss_pred ccccCCCccccccceeeEeecccceeecCCCCCCCcceEEEee-CCcEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006831 245 SSHYHGGVHDEKSVARHTVNLLTSTIKPDADQSDLRFCFRIIS-PTKVYTLQAENTLDQMDWIEKINGVIASLL 317 (629)
Q Consensus 245 ~~~~~g~v~d~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit-~~rty~LqAeSe~E~~~WI~aI~~aI~~~l 317 (629)
+....+.+.|+|..|.+....+...++|||+|++ +.++|+|||+|++|+++||.+|+.++....
T Consensus 63 ---------~~~~~p~g~I~L~~~~v~~~~~~~kk~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~~ 127 (263)
T 3a8p_A 63 ---------EQNSAPRCALFAEDSIVQSVPEHPKKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACASLF 127 (263)
T ss_dssp ------------CCCSEEEECTTCEEEECTTCSSCSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred ---------ccccCccceEEcCCcEEEECCcCCCCCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 0012334667787787765455567899999999 469999999999999999999999998765
No 67
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=99.59 E-value=4.2e-15 Score=149.10 Aligned_cols=98 Identities=27% Similarity=0.459 Sum_probs=78.3
Q ss_pred CcceeEeeeeeeccCCC----CCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCC
Q 006831 175 KVQTIKQGYLSKRSSNL----RADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHG 250 (629)
Q Consensus 175 ~~~~iKqGyL~Krs~~~----~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g 250 (629)
...++++|||.|++... ++.|+||||||+ ++.|+||+++.+.
T Consensus 55 ~~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~-~~~L~Yyk~~~~~--------------------------------- 100 (228)
T 3tfm_A 55 KQEALKQGWLHNNGGGSSTLSRRNWKKRWFVLR-QSKLMYFENDSEE--------------------------------- 100 (228)
T ss_dssp CCCSSEEEEEEECGGGCSSSCGGGCEEEEEEEC-SSEEEEESSTTCC---------------------------------
T ss_pred CCCcceEEEEEEECCCcCCcccCCceEEEEEEe-CCEEEEEeCCCCc---------------------------------
Confidence 34678999999998652 378999999998 5778888876441
Q ss_pred CccccccceeeEeecccceeecCCCCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHHHH
Q 006831 251 GVHDEKSVARHTVNLLTSTIKPDADQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVIAS 315 (629)
Q Consensus 251 ~v~d~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI~~ 315 (629)
.+.+.|+|..|.+..+ ...++|||+|++++|+|+|+|+|++|+++||.+|+.+|..
T Consensus 101 -------~~~g~I~L~~~~~v~~--~~~k~~~F~I~t~~r~~~l~A~s~~e~~~Wv~aL~~~i~~ 156 (228)
T 3tfm_A 101 -------KLKGTVEVRSAKEIID--NTNKENGIDIIMADRTFHLIAESPEDASQWFSVLSQVHSS 156 (228)
T ss_dssp -------SEEEEEEGGGCSEEEE--ETTTTSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred -------ceeEEEEcCCCEEecc--CCCCCcEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 2446677776665332 2357899999999999999999999999999999999963
No 68
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.57 E-value=5.6e-15 Score=159.32 Aligned_cols=99 Identities=19% Similarity=0.424 Sum_probs=73.6
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
.++|+|||.|+++..++.||||||||+ ++.|+||+++.+.
T Consensus 268 ~~~k~G~L~K~g~~~~k~WKkRwFVL~-~~~L~YYk~~~d~--------------------------------------- 307 (386)
T 3lju_X 268 NYLKEGYMEKTGPKQTEGFRKRWFTMD-DRRLMYFKDPLDA--------------------------------------- 307 (386)
T ss_dssp CCSEEEEEEECCTTSCSCCEEEEEEEE-TTEEEEESSTTCS---------------------------------------
T ss_pred ccceeeeEEEECCCCCCCCcccEEEEE-CCEEEEEecCCCc---------------------------------------
Confidence 468999999998876689999999998 6778888877552
Q ss_pred cceeeEeeccccee----ec-CCCCC---CCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006831 257 SVARHTVNLLTSTI----KP-DADQS---DLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVIASL 316 (629)
Q Consensus 257 ~~~~~~i~l~~~~v----k~-~~d~~---drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI~~~ 316 (629)
.+.+.|.|..+.. .. .+... .++|||.|++++|+|+|+|+|++|+++||.+|+.+|...
T Consensus 308 -~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F~I~t~~rty~l~A~s~~e~~~Wi~aL~~~i~~p 374 (386)
T 3lju_X 308 -FARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRP 374 (386)
T ss_dssp -BCSEEEECCCGGGTCEEEESCCTTCCSCCSCEEEEEECSSCEEEEEESSHHHHHHHHHHHHHHHHSC
T ss_pred -ccceEEEeecceeeeeecccCCccccccCCCcEEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence 1123333322211 11 11111 226999999999999999999999999999999999764
No 69
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=99.56 E-value=9.9e-15 Score=155.27 Aligned_cols=95 Identities=25% Similarity=0.536 Sum_probs=77.3
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
.++++|||.|+++. .+.|+||||||+ ++.|+||+++.+.
T Consensus 212 ~~~k~G~L~K~g~~-~k~WkkRwFVL~-~~~L~Yyk~~~~~--------------------------------------- 250 (347)
T 2r09_A 212 NPDREGWLLKLGGR-VKTWKRRWFILT-DNCLYYFEYTTDK--------------------------------------- 250 (347)
T ss_dssp CCCEEEEEEEECSS-SCCEEEEEEEEE-TTEEEEESSTTCS---------------------------------------
T ss_pred ccccCCeeEecCCC-cccceeEEEEEc-CCEEEEEcCCCcc---------------------------------------
Confidence 36899999999876 589999999998 5678899876442
Q ss_pred cceeeEeecccceeecCCCCCCCcceEEEeeC----------------------CcEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 257 SVARHTVNLLTSTIKPDADQSDLRFCFRIISP----------------------TKVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 257 ~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~----------------------~rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
.+.+.|.|..|.+... +...++|||+|.++ .|+|+|+|+|++|+.+||.+|+.+|.
T Consensus 251 -~p~G~I~L~~~~v~~~-~~~~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~ 328 (347)
T 2r09_A 251 -EPRGIIPLENLSIREV-EDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 328 (347)
T ss_dssp -SCSEEEECTTCEEEEE-CCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred -CCcEEEEcCCeEEEEc-cCCCCCCEEEEEeCCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 2346677777776653 34578999999987 38999999999999999999999986
No 70
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=99.56 E-value=5.3e-15 Score=151.61 Aligned_cols=100 Identities=22% Similarity=0.407 Sum_probs=73.5
Q ss_pred cceeEeeeeeeccCCCCCCceeEEEEEecCc------eEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccC
Q 006831 176 VQTIKQGYLSKRSSNLRADWKRRFFVLDSRG------LLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYH 249 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~g------lLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~ 249 (629)
..++++|||.|+ +.||||||||++++ .|+||+++.+...+
T Consensus 8 ~~v~k~G~L~K~-----K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~----------------------------- 53 (264)
T 1qqg_A 8 SDVRKVGYLRKP-----KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHK----------------------------- 53 (264)
T ss_dssp -CEEEEEEEECT-----TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTT-----------------------------
T ss_pred CCccEEEEEEEC-----CCCEeEEEEEECCCCCCCCCEEEEECCCcccccc-----------------------------
Confidence 467999999998 68999999999762 89999876431000
Q ss_pred CCccccccceeeEeecccce-eecCCCCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006831 250 GGVHDEKSVARHTVNLLTST-IKPDADQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVIASL 316 (629)
Q Consensus 250 g~v~d~~~~~~~~i~l~~~~-vk~~~d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI~~~ 316 (629)
...+.+.|+|..|. |.... +..++|||.|++++|+|+|+|+|++|+++||.+|+.++...
T Consensus 54 ------~~~p~g~I~L~~~~~V~~~~-~~~~~~~F~I~t~~rty~l~A~se~e~~~Wi~aL~~~~~~~ 114 (264)
T 1qqg_A 54 ------SSAPKRSIPLESCFNINKRA-DSKNKHLVALYTRDEHFAIAADSEAEQDSWYQALLQLHNRA 114 (264)
T ss_dssp ------CSCCSEEEEGGGEEEEEEEC-CSSCSSEEEEEESSCEEEEECSSHHHHHHHHHHHHHHC---
T ss_pred ------ccCcceEEEeeceEEEEecc-CCCCCcEEEEEECCEEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence 01234566666654 43322 34678999999999999999999999999999999988654
No 71
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=99.53 E-value=7.2e-14 Score=127.37 Aligned_cols=102 Identities=20% Similarity=0.355 Sum_probs=75.8
Q ss_pred Eeeeee-----eccCCC-CCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcc
Q 006831 180 KQGYLS-----KRSSNL-RADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVH 253 (629)
Q Consensus 180 KqGyL~-----Krs~~~-~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~ 253 (629)
.+|||. |++++. ++.|+||||+|.++ .||||....-. +. ...
T Consensus 3 ~~G~L~rk~llK~G~k~~~ksWkr~W~vL~g~-~L~yf~~~~~~--~~-----------------------------~~~ 50 (126)
T 2dtc_A 3 MEGPLRRKTLLKEGRKPALSSWTRYWVVLSGA-TLLYYGAKSLR--GT-----------------------------DRK 50 (126)
T ss_dssp EEEEEEEEEEEBTTBCCSSCCCEEEEEEEETT-EEEEEEBSSSC--CS-----------------------------SGG
T ss_pred eeeeeeeeehhhcCCcccccCcccEEEEEeCC-EEEEEcccccc--cc-----------------------------ccc
Confidence 567776 556653 68999999999954 57777644211 00 000
Q ss_pred ccccceeeEeecccceeecCCCCCCCcceEEEeeC--CcEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 254 DEKSVARHTVNLLTSTIKPDADQSDLRFCFRIISP--TKVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 254 d~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~--~rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
+.+..+...|.|..+.|.. ++...+++||+|.++ +..|.|||+|++++.+||.+|..+|.
T Consensus 51 ~~~~~P~~~i~L~g~~V~~-~e~~~~~~~F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~ 112 (126)
T 2dtc_A 51 HYKSTPGKKVSIVGWMVQL-PDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACK 112 (126)
T ss_dssp GBCSSCSEEEECTTCEEEC-CCCTTSTTEEEEECTTSCSEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred ccccCCCceEEeCCCEEEe-cCCCCCCCEEEEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 1123456788999999984 677778999999987 48999999999999999999999885
No 72
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=99.46 E-value=1.7e-13 Score=141.05 Aligned_cols=102 Identities=19% Similarity=0.308 Sum_probs=69.5
Q ss_pred cCCcceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCc
Q 006831 173 KGKVQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGV 252 (629)
Q Consensus 173 ~~~~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v 252 (629)
.....|.++|||+|++.. ++.|+||||||++ +.||||+++.+..+. +.
T Consensus 163 ~~~~~p~~~G~L~k~~~~-~k~WkkR~fvL~~-~~L~yyk~~~~~~~~-~~----------------------------- 210 (291)
T 3tca_A 163 TSIIVPELEGALYLKEDG-KKSWKRRYFLLRA-SGIYYVPKGKTKTSR-DL----------------------------- 210 (291)
T ss_dssp SSCCCCCCEEEEEEECTT-SSCEEEEEEEECS-SEEEECCTTCCSSTT-TC-----------------------------
T ss_pred cCCCCCceEEEEEEeCCC-CCCceEEEEEEeC-CEEEEEecCcccccc-Cc-----------------------------
Confidence 344567899999999877 4899999999985 457777766542110 00
Q ss_pred cccccceeeEeecccceeecC-----CCCCCCcceEEEeeCC------cEEEEEeCCHHHHHHHHHHHHHHH
Q 006831 253 HDEKSVARHTVNLLTSTIKPD-----ADQSDLRFCFRIISPT------KVYTLQAENTLDQMDWIEKINGVI 313 (629)
Q Consensus 253 ~d~~~~~~~~i~l~~~~vk~~-----~d~~drrfcF~Iit~~------rty~LqAeSe~E~~~WI~aI~~aI 313 (629)
...+++..+.+... .....++|||.|++++ ++|+|+|+|++|+..||.||+.|.
T Consensus 211 -------i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 211 -------ACFIQFENVNIYYGIQCKMKYKAPTDHCFVLKHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp -------EEEEEGGGCEEEEECSHHHHHCCSSSCEEEEECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred -------eeeccceeEEEEecCccccccCCCCCeEEEEEcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 01112222222111 0123568999999875 579999999999999999999775
No 73
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=99.40 E-value=1.7e-12 Score=120.98 Aligned_cols=125 Identities=21% Similarity=0.347 Sum_probs=79.6
Q ss_pred eEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCcccccc---ccccccc--cCCCcc
Q 006831 179 IKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLL---SRWLSSH--YHGGVH 253 (629)
Q Consensus 179 iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l---~~~~~~~--~~g~v~ 253 (629)
+|+|||++++.. .+.|++|||||+ ...|||+...... .+ +...+...... .-+++.+ +|+...
T Consensus 2 ~k~G~L~~~~~~-~~~w~~~~fvL~-~~~L~y~~e~s~~-~~---------~~~~e~~~~~~~~~~~~~~~n~~fh~~~~ 69 (150)
T 2fjl_A 2 IKNGILYLEDPV-NHEWYPHYFVLT-SSKIYYSEETSSD-QG---------NEDEEEPKEASGSTELHSSLEVLFQGPNP 69 (150)
T ss_dssp CEEEEEEEEETT-TTEEEEEEEEEE-TTEEEECCCCSCS-SC---------CSCCCCSCCCCCSCCCCCCSSSGGGSSCS
T ss_pred CcceEEEeecCC-CCCceEeEEEEE-CCEEEEEeecccc-cc---------ccCcccccccCCchhhcccchhccccCCc
Confidence 589999999765 589999999999 4567877632210 00 00000000000 0001101 111111
Q ss_pred c--------------cccceeeEeecccceeecCCC-CCCCcceEEEeeCC---cEEEEEeCCHHHHHHHHHHHHHHHHH
Q 006831 254 D--------------EKSVARHTVNLLTSTIKPDAD-QSDLRFCFRIISPT---KVYTLQAENTLDQMDWIEKINGVIAS 315 (629)
Q Consensus 254 d--------------~~~~~~~~i~l~~~~vk~~~d-~~drrfcF~Iit~~---rty~LqAeSe~E~~~WI~aI~~aI~~ 315 (629)
+ .-....+.|+|.+|+|...++ ...++|+|+|.+++ ++|.|.|+|.+||.+||.+|+.++..
T Consensus 70 ~~~e~~~~~l~E~~~lG~l~kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~~ 149 (150)
T 2fjl_A 70 AILEPEREHLDENSPLGDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQT 149 (150)
T ss_dssp TTSCTTCSSSCTTTTTTTCCCEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred cccchhHhcccccccccccccceEecCccEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 0 001236889999999976543 35689999999985 59999999999999999999999853
No 74
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=2.2e-12 Score=118.11 Aligned_cols=97 Identities=15% Similarity=0.292 Sum_probs=76.1
Q ss_pred ceeEeeeeeeccCC--CCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccc
Q 006831 177 QTIKQGYLSKRSSN--LRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHD 254 (629)
Q Consensus 177 ~~iKqGyL~Krs~~--~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d 254 (629)
.|..++||.++..+ ..+.||||||+|+ +..|+||+++.+..
T Consensus 8 ~pel~~~l~~~~pkk~tlK~~KrrWFvlk-~~~L~YyK~kee~~------------------------------------ 50 (137)
T 2ys3_A 8 IPELKDHLRIFRPRKLTLKGYRQHWVVFK-ETTLSYYKSQDEAP------------------------------------ 50 (137)
T ss_dssp CCCEECCCEECCTTSCCSSSSCCCEEEEC-SSCEEEESSTTTTT------------------------------------
T ss_pred CcchhHHHHhhCccccccccceeEEEEEe-CCEEEEECCchhcc------------------------------------
Confidence 56789999988655 3378999999998 55788887765520
Q ss_pred cccceeeEeecccceeecCCCCCCCcceEEEeeCC----cEEEEEeCCHHHHHHHHHHHHHH
Q 006831 255 EKSVARHTVNLLTSTIKPDADQSDLRFCFRIISPT----KVYTLQAENTLDQMDWIEKINGV 312 (629)
Q Consensus 255 ~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~----rty~LqAeSe~E~~~WI~aI~~a 312 (629)
..+.+.|+|..|.|.++......+|+|.+..|. ++|.|.|+|++++.+||+|++-+
T Consensus 51 --~ePig~I~L~gceV~pd~~~~~~kf~ikl~iPs~~g~r~y~l~cdsEeqy~~WMaA~rlA 110 (137)
T 2ys3_A 51 --GDPIQQLNLKGCEVVPDVNVSGQKFCIKLLVPSPEGMSEIYLRCQDEQQYARWMAGCRLA 110 (137)
T ss_dssp --SCCSCCBCTTTCEEEECCBGGGTBEEEEEEEECSSSEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred --CCCceEEECCCCEEeccccccCCceEEEEEccCCCCceEEEEECCCHHHHHHHHHHHHHh
Confidence 123466888899988764445678999888774 99999999999999999999854
No 75
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=99.32 E-value=2.2e-12 Score=132.62 Aligned_cols=106 Identities=21% Similarity=0.375 Sum_probs=76.5
Q ss_pred cceeEeeeeeec-----cC--C----CCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCcccccccccc
Q 006831 176 VQTIKQGYLSKR-----SS--N----LRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWL 244 (629)
Q Consensus 176 ~~~iKqGyL~Kr-----s~--~----~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~ 244 (629)
..+.|+|||.++ ++ + .++.|++|||||. ++.||||+++.....
T Consensus 9 ~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLk-g~~L~fYKde~~~~~------------------------- 62 (279)
T 3a8n_A 9 GTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLK-GCTLFFYETDGRSGI------------------------- 62 (279)
T ss_dssp -CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEE-TTEECCBCCC------------------------------
T ss_pred CceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEe-CCEEEEEeccccccc-------------------------
Confidence 356799999753 11 1 3578999999998 566888877643200
Q ss_pred ccccCCCccccccceeeEeecccceeecCCCCCCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006831 245 SSHYHGGVHDEKSVARHTVNLLTSTIKPDADQSDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIASL 316 (629)
Q Consensus 245 ~~~~~g~v~d~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~~~ 316 (629)
+....+...|.+..|.+...++...++|+|+|.+++ +.|+|||+|++||++||.+|+.++...
T Consensus 63 ---------~~~~~p~~~I~L~ga~v~~a~d~~kKk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~~~~ 126 (279)
T 3a8n_A 63 ---------DHNSVPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACAAA 126 (279)
T ss_dssp ------------CCCSSCCBCCSCEECCCTTSSSSCSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ---------ccccCCCceEeccCcEEEeccccCCCCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHhhh
Confidence 000123345677778877666777889999999876 789999999999999999999998754
No 76
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=99.29 E-value=6e-12 Score=113.40 Aligned_cols=96 Identities=20% Similarity=0.397 Sum_probs=62.4
Q ss_pred Eeeeeee--ccCCCCC-CceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 180 KQGYLSK--RSSNLRA-DWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 180 KqGyL~K--rs~~~~k-~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
.+|||.+ +++ .++ .|+||||||++ +.|+||+.+.+.. +
T Consensus 3 ~eGwl~~pk~~~-~~k~~Wkkr~~vL~~-~kL~~y~~~~~~~-~------------------------------------ 43 (117)
T 2rov_A 3 LEGWLSLPVRNN-TKKFGWVKKYVIVSS-KKILFYDSEQDKE-Q------------------------------------ 43 (117)
T ss_dssp SEEEEECCCCSS-SSCCCCCEEEEEEET-TEEEEESCHHHHH-T------------------------------------
T ss_pred eEEEEEeecCCC-ccCCCcEEEEEEEEC-CEEEEEECCCCcc-c------------------------------------
Confidence 4899996 544 456 89999999985 5677776543210 0
Q ss_pred cceeeEeeccc--c--eee----cCCCCCCCcceEEEeeC------CcEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 257 SVARHTVNLLT--S--TIK----PDADQSDLRFCFRIISP------TKVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 257 ~~~~~~i~l~~--~--~vk----~~~d~~drrfcF~Iit~------~rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
..+...|++.. + .+. +.+...+.++.|+|+++ .++++|.|+|++|++.||.+|+.+|.
T Consensus 44 ~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 44 SNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQILYANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp TCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred CCceEEEECcccEEEEEcccccccccccccCCcEEEEEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 00112222211 1 000 11233456789999864 48999999999999999999998874
No 77
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.28 E-value=2.7e-11 Score=108.94 Aligned_cols=101 Identities=19% Similarity=0.268 Sum_probs=71.0
Q ss_pred cceeEeeeeeeccC-CCCCCceeEEEEEec---Cc--eEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccC
Q 006831 176 VQTIKQGYLSKRSS-NLRADWKRRFFVLDS---RG--LLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYH 249 (629)
Q Consensus 176 ~~~iKqGyL~Krs~-~~~k~WkRRwFvL~~---~g--lLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~ 249 (629)
..++|+|||+++.- .+.+.|+||||+|.. .| .|-||..+++...+
T Consensus 10 e~~vk~G~L~~q~q~~fgkKWrk~w~vLy~~S~~GvaRLE~yd~~ek~~r~----------------------------- 60 (127)
T 2d9w_A 10 DGAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKPRRC----------------------------- 60 (127)
T ss_dssp CCSSEEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEEECCCSCSSSC-----------------------------
T ss_pred CccccceEEEecccchhhhhhheeEEEEecCCCCCceeeeeeeccCccccC-----------------------------
Confidence 45789999999985 555679999999984 22 47777766542100
Q ss_pred CCccccccceeeEeecccce-eecCCCC---CCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHH
Q 006831 250 GGVHDEKSVARHTVNLLTST-IKPDADQ---SDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVI 313 (629)
Q Consensus 250 g~v~d~~~~~~~~i~l~~~~-vk~~~d~---~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI 313 (629)
..++..|.|..|. |.+...+ ....++|.|.|++|+|+|.|+++ |+.+||.+|....
T Consensus 61 -------~~~rrVIrLsdCisV~~~~~e~~~pk~~~aF~l~T~er~~~laAe~~-E~~~Wi~~ic~~a 120 (127)
T 2d9w_A 61 -------EAARKVIRLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPAA-ERGDWVQAICLLA 120 (127)
T ss_dssp -------SCCEEEECGGGEEEEEECCSCSSSCSSCEEEEEEESSCEEEEEECHH-HHHHHHHHHHHHH
T ss_pred -------CCCceEEEhhhCCeEecccCccCCCCcceEEEEEeCCcEEEEEeCcH-HHHHHHHHHHHHh
Confidence 1234556666553 3332222 13458999999999999999975 8999999998664
No 78
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.22 E-value=1.5e-11 Score=133.89 Aligned_cols=101 Identities=19% Similarity=0.355 Sum_probs=68.8
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCC-CcCCCcccccCCCCCCccccccccccccccCCCcccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWN-SAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDE 255 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~-~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~ 255 (629)
.++|+|||.|+++.. +.||||||+|++++.|+||+++.... .|..
T Consensus 5 ~v~keG~L~K~g~~~-k~Wk~r~fvL~~~~~l~yyk~~~~~~~~~~i--------------------------------- 50 (446)
T 4ejn_A 5 AIVKEGWLHKRGEYI-KTWRPRYFLLKNDGTFIGYKERPQDVDQREA--------------------------------- 50 (446)
T ss_dssp CEEEEEEEEEEETTT-TEEEEEEEEEETTSBEEEESSCC-------C---------------------------------
T ss_pred eEEEEeeEEeecccc-ccccceEEEEeeCCEEEEEecCCCCCccCcc---------------------------------
Confidence 589999999997765 79999999998677788887765421 0100
Q ss_pred ccceeeEeecccceeecCCCCCCCcceEEEeeCC-cEE---EEEeCCHHHHHHHHHHHHHHHHHH
Q 006831 256 KSVARHTVNLLTSTIKPDADQSDLRFCFRIISPT-KVY---TLQAENTLDQMDWIEKINGVIASL 316 (629)
Q Consensus 256 ~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~-rty---~LqAeSe~E~~~WI~aI~~aI~~~ 316 (629)
+...+.+..|.+.. .+..+++||.|.+++ +++ +|++++++++.+|+.+|+.+|..+
T Consensus 51 ---~l~~~~~~~~~~~~--~~~~~~~~f~I~~~~~~~~~~r~~~~~~~ee~e~W~~ai~~~i~~~ 110 (446)
T 4ejn_A 51 ---PLNNFSVAQCQLMK--TERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGL 110 (446)
T ss_dssp ---CCGGGBCTTCEEEE--ECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHCCC-
T ss_pred ---cccCccccceeecC--CCCCCCceeEEEcCCCceeeeeEEecCCHHHHHHHHHHHHhhhhhh
Confidence 00111122233322 124567999999876 333 799999999999999999998543
No 79
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=99.07 E-value=8.4e-10 Score=112.21 Aligned_cols=101 Identities=20% Similarity=0.232 Sum_probs=66.5
Q ss_pred CcceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccc
Q 006831 175 KVQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHD 254 (629)
Q Consensus 175 ~~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d 254 (629)
...+..+|||++++.. ++.|+||||+|+++|+ ||+++.....++ ++
T Consensus 129 s~~P~~~G~L~~ke~~-~K~WkkRyfvLr~sgL-y~~~k~~sk~~r-----------------~l--------------- 174 (256)
T 3hk0_A 129 SSSPEIQGFLHVKELG-KKSWKKLYVCLRRSGL-YCSTKGTSAAPR-----------------HL--------------- 174 (256)
T ss_dssp TSCEEEEEEEEEECTT-SSCEEEEEEEEETTEE-EEESSTTCCCGG-----------------GE---------------
T ss_pred CCCCcceeEEEEecCC-CCcceEEEEEEeCCEE-EEEecCCCCccc-----------------cc---------------
Confidence 3567899999999765 4899999999998775 666655432111 00
Q ss_pred cccceeeEeecccceeecCC-----CCCCCcceEEEeeCCc------EEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 255 EKSVARHTVNLLTSTIKPDA-----DQSDLRFCFRIISPTK------VYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 255 ~~~~~~~~i~l~~~~vk~~~-----d~~drrfcF~Iit~~r------ty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
..-+.+....|-... -....+|||.|.++.. .++|+|++++++..||.+|+-+..
T Consensus 175 -----~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~ 240 (256)
T 3hk0_A 175 -----QLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLKY 240 (256)
T ss_dssp -----EEEECCTTEEEEEESSTHHHHCCSSSEEEEEEETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred -----eEEEEcCCCEEEEecccccccCCCCCCEEEEEcccccCCCceEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 000112222221100 0123479999996643 699999999999999999998873
No 80
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=99.04 E-value=6.6e-10 Score=114.33 Aligned_cols=100 Identities=19% Similarity=0.337 Sum_probs=63.5
Q ss_pred cceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcccc
Q 006831 176 VQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDE 255 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~ 255 (629)
..+.++|||++++.+ ++.|+||||+|+++|+ ||+.+...+.+. ++
T Consensus 156 ~~pe~~G~L~~k~~~-~k~WkkRyfvLr~sgL-yy~~K~~sk~~r-----------------~l---------------- 200 (281)
T 4gmv_A 156 TVPEIEGVLWLKDDG-KKSWKKRYFLLRASGI-YYVPKGKAKVSR-----------------DL---------------- 200 (281)
T ss_dssp CCCCCEEEEEEECTT-SSCEEEEEEEECSSCE-EEC--------------------------CC----------------
T ss_pred CCCccEEEEEEECCC-CCCCeEEEEEEeCCEE-EEEeCCCCCccc-----------------cc----------------
Confidence 456789999999765 4899999999998885 555544322100 00
Q ss_pred ccceeeEeecccceeecCC-----CCCCCcceEEEeeCC------cEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 256 KSVARHTVNLLTSTIKPDA-----DQSDLRFCFRIISPT------KVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 256 ~~~~~~~i~l~~~~vk~~~-----d~~drrfcF~Iit~~------rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
...+.+..+.|-... -....+|||.|.++. ..++|+|++++++..||.||+-+..
T Consensus 201 ----~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak~ 266 (281)
T 4gmv_A 201 ----VCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKY 266 (281)
T ss_dssp ----EEEECGGGCEEEEESSHHHHTCCSCSCEEEEECTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ----eEEEEcCCcEEEEecccccccCCCCCcEEEEecCccCCCCCceEEEEeCCHHHHHHHHHHHHHHhh
Confidence 011122222221100 112458999999754 4799999999999999999998863
No 81
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=98.99 E-value=3.1e-09 Score=98.92 Aligned_cols=94 Identities=20% Similarity=0.221 Sum_probs=69.2
Q ss_pred cceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcccc
Q 006831 176 VQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDE 255 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~ 255 (629)
..++++|||.|+.+. .|++|||+|++...|||......
T Consensus 50 e~Ilk~G~v~KrkGl---~~kkR~liLT~~PrL~Yvdp~~~--------------------------------------- 87 (151)
T 1w1g_A 50 NLILKMGPVDKRKGL---FARRRQLLLTEGPHLYYVDPVNK--------------------------------------- 87 (151)
T ss_dssp CCEEEEEEEEEEETT---EEEEEEEEEETTTEEEEEETTTT---------------------------------------
T ss_pred CcEEEEEEEEecccC---cceeEEEEEcCCceEEEEcCccc---------------------------------------
Confidence 478999999998553 49999999997777777654432
Q ss_pred ccceeeEeecc-cceeecCCCCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHHHHHhcc
Q 006831 256 KSVARHTVNLL-TSTIKPDADQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVIASLLSF 319 (629)
Q Consensus 256 ~~~~~~~i~l~-~~~vk~~~d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI~~~l~~ 319 (629)
...+.|.+. .+.+.... ..+|.|.||+|+|+|.|. ..++++|++||+.++...+..
T Consensus 88 --~~KGeIpls~~l~ve~k~-----~~~F~I~Tp~RtY~~~d~-~~~AqeWv~aI~~~~~~~~~~ 144 (151)
T 1w1g_A 88 --VLKGEIPWSQELRPEAKN-----FKTFFVHTPNRTYYLMDP-SGNAHKWCRKIQEVWRQRYQS 144 (151)
T ss_dssp --EEEEEECCCTTCEEEESS-----SSEEEEEETTEEEEEECT-TSCHHHHHHHHHHHHHHHHCC
T ss_pred --cccceEecCCCeeEEEcC-----CCEEEEECCCceEEEEcC-ccCHHHHHHHHHHHHHHHhcc
Confidence 122334433 23344321 238999999999999997 889999999999999876654
No 82
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=98.90 E-value=5.3e-09 Score=98.10 Aligned_cols=97 Identities=14% Similarity=0.264 Sum_probs=75.1
Q ss_pred ceeEeeeeeeccCC--CCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccc
Q 006831 177 QTIKQGYLSKRSSN--LRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHD 254 (629)
Q Consensus 177 ~~iKqGyL~Krs~~--~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d 254 (629)
.|...+||.....+ ..|.|||||||++ ++.|+||+++++..
T Consensus 46 iPeL~dyLk~~~pk~~tLKgyKryWFv~k-d~~LsyYKskEe~~------------------------------------ 88 (173)
T 4f7h_A 46 IPELADYIKVFKPKKLTLKGYKQYWCTFK-DTSISCYKSKEESS------------------------------------ 88 (173)
T ss_dssp TTCEEEEEEEECCBTTBCCCCEEEEEEEE-TTEEEEESCGGGCS------------------------------------
T ss_pred ChhhHhHHHhhcchhcccccceeEEEEEe-CCEEEEEcCHhHhc------------------------------------
Confidence 45678999764332 3489999999998 67799998886631
Q ss_pred cccceeeEeecccceeecCCCCCCCcceEEEeeCC----cEEEEEeCCHHHHHHHHHHHHHH
Q 006831 255 EKSVARHTVNLLTSTIKPDADQSDLRFCFRIISPT----KVYTLQAENTLDQMDWIEKINGV 312 (629)
Q Consensus 255 ~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~----rty~LqAeSe~E~~~WI~aI~~a 312 (629)
..+.+.|+|.+|.|.++......+|++++..|. ..|.|.|+|+.++..||.|.+-+
T Consensus 89 --geP~~~I~LrGCEVtpDVnva~~Kf~IkL~vP~~~gm~e~~Lrcd~E~qya~WMAAcrLA 148 (173)
T 4f7h_A 89 --GTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAEGMNEIWLRCDNEKQYAHWMAACRLA 148 (173)
T ss_dssp --SCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred --CCCceEEecCceEEeccccccccceeEEEeccCCCCcceeeeecCCHHHHHHHHHHhhhh
Confidence 124578999999999865455668888887652 78999999999999999998744
No 83
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=98.87 E-value=6.9e-09 Score=96.35 Aligned_cols=97 Identities=16% Similarity=0.250 Sum_probs=73.0
Q ss_pred ceeEeeeeeeccCC--CCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccc
Q 006831 177 QTIKQGYLSKRSSN--LRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHD 254 (629)
Q Consensus 177 ~~iKqGyL~Krs~~--~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d 254 (629)
.|...+||.....+ ..|.||+|||+++ ++.|+||+++++..
T Consensus 25 iPeL~dyLk~~~pkrltLKgfKryWfv~k-Dt~LsyYKSkEe~~------------------------------------ 67 (165)
T 4bbk_A 25 IPKLADYLKLFRPKKLMLKACKQYWFVFK-DTSIAYFKNKELEQ------------------------------------ 67 (165)
T ss_dssp -CCEEEEEEEEC-------CCEEEEEEEE-TTEEEEESSGGGTT------------------------------------
T ss_pred ChhhHhHHHhhcccccccccceeEEEEEe-CCEEEEEcCHHHhc------------------------------------
Confidence 56678999764332 3489999999998 67799999887631
Q ss_pred cccceeeEeecccceeecCCCCCCCcceEEEeeCC----cEEEEEeCCHHHHHHHHHHHHHH
Q 006831 255 EKSVARHTVNLLTSTIKPDADQSDLRFCFRIISPT----KVYTLQAENTLDQMDWIEKINGV 312 (629)
Q Consensus 255 ~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~----rty~LqAeSe~E~~~WI~aI~~a 312 (629)
..+.+.|+|..|.|.++......+|+|+|..|. ..+.|.|+|+.+...||.|++-+
T Consensus 68 --geP~~~inLrGCEVtPDVnva~~Kf~ikL~ip~~~gm~e~~LrcdsE~QYa~WMAAcrLA 127 (165)
T 4bbk_A 68 --GEPIEKLNLRGCEIVPDVNVSGRKFGIKLLIPVADGMNEVYLRCDHEDQYARWMAACILA 127 (165)
T ss_dssp --SCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred --CCCceEEecCccEEecccccccceeeEEEecCCCCcceeeeeecCCHHHHHHHHHHhhhc
Confidence 124578999999998764445668999987662 68999999999999999999744
No 84
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=98.86 E-value=9.7e-08 Score=103.79 Aligned_cols=99 Identities=15% Similarity=0.257 Sum_probs=65.3
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
..+++|.|.+.++ +.++.|||+|.++-+++........
T Consensus 243 ~li~~g~l~~~~~---~~~~~r~~fLF~d~Ll~~k~~~~~~--------------------------------------- 280 (434)
T 3mpx_A 243 EFLKEGTLMKVTG---KNRRPRHLFLMNDVLLYTYPQKDGK--------------------------------------- 280 (434)
T ss_dssp CEEECCEEEEEET---TEEEEEEEEEESSEEEEEEECTTSC---------------------------------------
T ss_pred ceEecceEEEEeC---CCceEEEEEEECCEEEEEEecCCCe---------------------------------------
Confidence 4689999988753 3589999999977666544332110
Q ss_pred cceeeEeecccceeecCCCCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHHHHHhc
Q 006831 257 SVARHTVNLLTSTIKPDADQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVIASLLS 318 (629)
Q Consensus 257 ~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI~~~l~ 318 (629)
-.....+.+....+.. .++.+.+|+|.|.++.++|+|+|.|++|++.||++|+.+|.....
T Consensus 281 y~~k~~i~L~~l~v~~-~~~~~~~~~f~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~e~~~ 341 (434)
T 3mpx_A 281 YRLKNTLAVANMKVSR-PVMEKVPYALKIETSESCLMLSASSCAERDEWYGCLSRALPEDYK 341 (434)
T ss_dssp EEEEEEEEC-----CC-CCCTTSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHC------
T ss_pred EEEEEEEEcCCcEEEe-cCCCCCCeeEEEecCCeEEEEecCCHHHHHHHHHHHHHHHHHHHh
Confidence 1223455555555543 233456899999999999999999999999999999999976544
No 85
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.77 E-value=5.6e-08 Score=87.55 Aligned_cols=104 Identities=20% Similarity=0.273 Sum_probs=66.2
Q ss_pred CcceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccc
Q 006831 175 KVQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHD 254 (629)
Q Consensus 175 ~~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d 254 (629)
...++|+||+.+.+..- +.|||+|++|+...+-+|..+...+.+. .+.-
T Consensus 5 ~s~vlkeGWmVH~t~~d-~~rKRHYWrLD~K~Itlf~~e~~~k~yk------------------------------eIpL 53 (129)
T 2d9z_A 5 SSGMVKEGWMVHYTSRD-NLRKRHYWRLDSKCLTLFQNESGSKYYK------------------------------EIPL 53 (129)
T ss_dssp CTTSEEEEEEEEEESSC-CCCEEEEEEEESSCEEEESCSSCCSCCC------------------------------EECT
T ss_pred CCceeecceEEEEccCC-ccccceeeEecCCeEEEEecCCCCceec------------------------------eeeH
Confidence 34689999999987664 7899999999977755554433332111 0000
Q ss_pred cccceeeEeecccceeecCCCCCCCcceEEEeeCCcEEEEEeCC---------------HHHHHHHHHHHHHHHH
Q 006831 255 EKSVARHTVNLLTSTIKPDADQSDLRFCFRIISPTKVYTLQAEN---------------TLDQMDWIEKINGVIA 314 (629)
Q Consensus 255 ~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~rty~LqAeS---------------e~E~~~WI~aI~~aI~ 314 (629)
.+.+.+..+...........++||+|+|.+.+|+.+++. .+.++.|..||++|+.
T Consensus 54 -----seIL~v~~~~~~~~~~~~~~phcFEi~T~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALm 123 (129)
T 2d9z_A 54 -----SEILRISSPRDFTNISQGSNPHCFEIITDTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALM 123 (129)
T ss_dssp -----TTCCEECCTTCCCCSSSCSCCCSEEEECSSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHH
T ss_pred -----HHhcccccccCccccCCCCCCceEEEEECCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhcc
Confidence 011111111111000122346999999999999999853 6899999999998874
No 86
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.76 E-value=1.2e-08 Score=91.72 Aligned_cols=103 Identities=13% Similarity=0.243 Sum_probs=63.6
Q ss_pred CcceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccc
Q 006831 175 KVQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHD 254 (629)
Q Consensus 175 ~~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d 254 (629)
...++|+||+.+.+.. .+.|||+|++|+...+-+|..+...+++. .+.
T Consensus 5 ~s~vlkeGW~VH~t~~-d~~rKRHYWrLD~K~Itlf~~e~~~~~yk------------------------------eIp- 52 (125)
T 2coa_A 5 SSGTLREGWVVHYSNK-DTLRKRHYWRLDCKCITLFQNNTTNRYYK------------------------------EIP- 52 (125)
T ss_dssp CCSCSEEEEEEECCSS-SCCCEEEEEEECSSEEEEESSSSCSSCSE------------------------------EEE-
T ss_pred CCceeecceEEEEccC-CccccceeeEecCCeEEEEecCCCCceee------------------------------eee-
Confidence 4568999999999665 58999999999866654444333222110 000
Q ss_pred cccceeeEeecccceeecCCCCCCCcceEEEeeCCcEEEEEeC-----------CHHHHHHHHHHHHHHH
Q 006831 255 EKSVARHTVNLLTSTIKPDADQSDLRFCFRIISPTKVYTLQAE-----------NTLDQMDWIEKINGVI 313 (629)
Q Consensus 255 ~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~rty~LqAe-----------Se~E~~~WI~aI~~aI 313 (629)
..+.+.+..|............+||+|+|.+.+|+.+++ ..+.++.|..||++++
T Consensus 53 ----L~eIl~v~~~~~~~~l~~~~~~hcFEi~T~~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqAL 118 (125)
T 2coa_A 53 ----LSEILTVESAQNFSLVPPGTNPHCFEIVTANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQAL 118 (125)
T ss_dssp ----TTTCCEEEESCCCSSSCTTSCCEEEEEECSSCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHG
T ss_pred ----hhHeecccccccccccCCCCCCceEEEEeCCeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhc
Confidence 001111111111110012235799999999999999984 1356999999999876
No 87
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=98.36 E-value=5.3e-06 Score=73.96 Aligned_cols=105 Identities=17% Similarity=0.133 Sum_probs=70.5
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
..+++|.|.+-.....+.=+++||+|-++.++|-.+..... |.
T Consensus 7 ~lv~eG~l~el~~~~~k~~~~v~~FLfND~Ll~a~~~~~~~--~~----------------------------------- 49 (113)
T 1zc3_B 7 YLVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRR--GM----------------------------------- 49 (113)
T ss_dssp CEEEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTT--SC-----------------------------------
T ss_pred EEEEeCcEEEEccccCCCCccEEEEecCCEEEEEEEeccCc--cc-----------------------------------
Confidence 36788999887543222234578999988877766543221 00
Q ss_pred cceeeEeecccceeecCCCCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHHHHHhc
Q 006831 257 SVARHTVNLLTSTIKPDADQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVIASLLS 318 (629)
Q Consensus 257 ~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI~~~l~ 318 (629)
-.....+++....+.-.++...-+++|.|.+..++++|+|+|++|..+||.+|+.+|..++.
T Consensus 50 ~~~~~~~~L~~~~v~d~~d~~~~~n~f~i~~~~~s~~~~aes~~eK~~Wl~~~~~a~~~~~~ 111 (113)
T 1zc3_B 50 YRYNALYPLDRLAVVNVKDNPPMKDMFKLLMFPESRIFQAENAKIKREWLEVLEETKRALSD 111 (113)
T ss_dssp EEEEEEEETTTCEEEEECCBTTBSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEcccCEEEECCCCcccceEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHHHHhh
Confidence 01122344443333222344456899999999999999999999999999999999977653
No 88
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=98.26 E-value=0.0005 Score=73.92 Aligned_cols=100 Identities=21% Similarity=0.303 Sum_probs=67.4
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
..+++|.|.+.... .+.++.||++|.++-+++-.++. .. |
T Consensus 233 rli~~G~l~~~~~~-~~~~~~~~~fLF~d~Ll~~k~k~-~~------------------------------y-------- 272 (406)
T 2vrw_B 233 RPKIDGELKITSVE-RRSKTDRYAFLLDKALLICKRRG-DS------------------------------Y-------- 272 (406)
T ss_dssp SEEEEEEEEEECSS-CCSCEEEEEEEESSEEEEEEEET-TE------------------------------E--------
T ss_pred cccccccEEEEecC-CCccceEEEEecCCEEEEEEecC-Cc------------------------------e--------
Confidence 36899999887543 25689999999977666644321 10 0
Q ss_pred cceeeEeecccceeecCCCC----CCCcceEEEee--CCcEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006831 257 SVARHTVNLLTSTIKPDADQ----SDLRFCFRIIS--PTKVYTLQAENTLDQMDWIEKINGVIASLL 317 (629)
Q Consensus 257 ~~~~~~i~l~~~~vk~~~d~----~drrfcF~Iit--~~rty~LqAeSe~E~~~WI~aI~~aI~~~l 317 (629)
.....+.+....+...++. ...++.|.|++ +.+.|+|+|.|+++++.||++|+.+|....
T Consensus 273 -~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~ 338 (406)
T 2vrw_B 273 -DLKASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIY 338 (406)
T ss_dssp -EEEEEEETTTEEEEC--------CTTCEEEEEEETTCSCEEEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred -EEEEEecccceeeeecCCCCccCCccceeeEEEecCCCceEEEeCCCHHHHHHHHHHHHHHHhhhh
Confidence 1224455555454433221 12358999997 457999999999999999999999998654
No 89
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=98.17 E-value=0.00014 Score=82.22 Aligned_cols=99 Identities=20% Similarity=0.248 Sum_probs=68.4
Q ss_pred eeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcccccc
Q 006831 178 TIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEKS 257 (629)
Q Consensus 178 ~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~~ 257 (629)
.+++|.|.+.... ++.++.|||+|.++-+++-.++ ... -
T Consensus 406 ll~~G~l~~~~~~-~~~~~~r~~fLF~d~Ll~~k~~-~~~---------------------------------------y 444 (587)
T 3ky9_A 406 PKIDGELKITSVE-RRSKMDRYAFLLDKALLICKRR-GDS---------------------------------------Y 444 (587)
T ss_dssp EEEEEEEEEECSS-CCSCEEEEEEEETTEEEEEEEE-TTE---------------------------------------E
T ss_pred eEEEeeEEEEecc-CCCcceEEEEEECCEEEEEEec-CCE---------------------------------------E
Confidence 6899999887544 3678999999997776665443 110 1
Q ss_pred ceeeEeecccceeecCCCC----CCCcceEEEeeCC--cEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006831 258 VARHTVNLLTSTIKPDADQ----SDLRFCFRIISPT--KVYTLQAENTLDQMDWIEKINGVIASLL 317 (629)
Q Consensus 258 ~~~~~i~l~~~~vk~~~d~----~drrfcF~Iit~~--rty~LqAeSe~E~~~WI~aI~~aI~~~l 317 (629)
.....+.+....+...++. ...+++|.|++.. ++|+|+|.|++|++.||++|+.+|....
T Consensus 445 ~~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~~~~~~~L~A~S~eeK~~Wi~~I~~ai~~~~ 510 (587)
T 3ky9_A 445 DLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIY 510 (587)
T ss_dssp EEEEEEEGGGEEEEEC-----CCCTTCEEEEEEETTC---CEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred EeeeeechhhceeeecCCCCcccccccceeEEEEcCCCceEEEEeCCHHHHHHHHHHHHHHhhhhc
Confidence 1234556655555443221 2246889999876 7999999999999999999999997653
No 90
>2z0v_A SH3-containing GRB2-like protein 3; helix bundle, alternative splicing, coiled coil, SH3 domain, endocytosis, structural genomics, NPPSFA; 2.49A {Homo sapiens}
Probab=97.87 E-value=4.9e-05 Score=76.37 Aligned_cols=88 Identities=14% Similarity=0.201 Sum_probs=77.5
Q ss_pred hhhhhhHhHHHHHHHHHHhcccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 006831 7 TVAFNGDGNFVLQAREKFLSLRKSTRMDVAVVIEEDLHNARTSFEQARFNLVGALSNVEAKKRFELLEAVGGTMDAHLRF 86 (629)
Q Consensus 7 ~~~Fe~~q~kyd~~~~ky~slsk~k~~~~~~E~a~eL~~aRk~f~~asldyv~~l~~vq~kk~~e~le~l~~~~~a~~~f 86 (629)
-++|++.--.||.++.|+.+ ...++|..++..|..+.-+++..|..|..+ +++++..+..|+.+|..|
T Consensus 142 rKkle~~rLd~D~ak~k~~k-----------~~eeEl~~A~~~fe~~~e~~~~~m~~~~~~-~~e~l~~l~~~v~aQl~y 209 (240)
T 2z0v_A 142 LKKLEGRRLDYDYKKKRVGK-----------IPDEEVRQAVEKFEESKELAERSMFNFLEN-DVEQVSQLAVFIEAALDY 209 (240)
T ss_dssp HHHHHHHHHHHHHHHTTTTS-----------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHS-THHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcc-----------ccHHHHHHHHHHHHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHH
Confidence 36889999999999888733 238889999999999999999999999877 589999999999999999
Q ss_pred HhhhhHhhhhchHHHHHHHH
Q 006831 87 FKQGYELLHQMEPFINQVLA 106 (629)
Q Consensus 87 f~~g~e~~~~l~p~~~~l~~ 106 (629)
|+++++.+.++.|++.....
T Consensus 210 ~~~~~e~L~~l~~~l~~~~~ 229 (240)
T 2z0v_A 210 HRQSTEILQELQSKLQMRIS 229 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999876554
No 91
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.86 E-value=6.2e-05 Score=68.86 Aligned_cols=56 Identities=16% Similarity=0.306 Sum_probs=44.9
Q ss_pred eeEeecccceeecCCCCCCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHHH
Q 006831 260 RHTVNLLTSTIKPDADQSDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIAS 315 (629)
Q Consensus 260 ~~~i~l~~~~vk~~~d~~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~~ 315 (629)
.+.+++..-.|....+..+.++||+|..+. +++.+.|.|.+|++.||++|+.+|..
T Consensus 71 kgklPL~g~~V~~~ed~~~~~~aFeI~g~~~~~i~v~~~s~eE~~~Wl~~L~~~i~~ 127 (132)
T 1v61_A 71 QGKIPIAGMVVNRLDEIEGSDCMFEITGSTVERIVVHCNNNQDFQEWMEQLNRLTKS 127 (132)
T ss_dssp EEEECTTTCBCSTTCSSSSSCCCEEEECSSSCEEEECCCCSHHHHHHHHHHHHHHTT
T ss_pred EEEEecceeEEEeccccccCccEEEEecCCCceEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 466666665555433444679999999988 89999999999999999999998853
No 92
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.78 E-value=0.00017 Score=65.21 Aligned_cols=104 Identities=17% Similarity=0.279 Sum_probs=66.2
Q ss_pred CcceeEeeeeeeccC-------CCCCCceeEEEEEecC-----ceEEEEeCCCCCCCcCCCcccccCCCCCCcccccccc
Q 006831 175 KVQTIKQGYLSKRSS-------NLRADWKRRFFVLDSR-----GLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSR 242 (629)
Q Consensus 175 ~~~~iKqGyL~Krs~-------~~~k~WkRRwFvL~~~-----glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~ 242 (629)
.+...|+|.|.--.. .....|.|+|++|... -+|-||..++...+ ...+.
T Consensus 15 ~~e~~kEG~l~~~~~~~~~~~~~~~~~W~k~RLvL~k~g~G~~y~LEfy~PPkssKp-K~~i~----------------- 76 (136)
T 1v5m_A 15 LVDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPKASRP-KVSIP----------------- 76 (136)
T ss_dssp SCSCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESSTTSSSC-SSCEE-----------------
T ss_pred cceeeeeeeeeeecccccccccCcccchhheeeEEEEccCCCceEEEEecCCcccCC-ccccc-----------------
Confidence 346789998843222 1346899999999853 46788866543210 00000
Q ss_pred ccccccCCCccccccceeeEeecccceeecCCCCCCCcceEEEeeCCc-EEEEEeCCHHHHHHHHHHHHHHHHH
Q 006831 243 WLSSHYHGGVHDEKSVARHTVNLLTSTIKPDADQSDLRFCFRIISPTK-VYTLQAENTLDQMDWIEKINGVIAS 315 (629)
Q Consensus 243 ~~~~~~~g~v~d~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~r-ty~LqAeSe~E~~~WI~aI~~aI~~ 315 (629)
...+ ..+..++.. +-.|+.+.|.|.+.++ .|+|.|.++.++++|++.|+.++..
T Consensus 77 ------cs~I----------~EVR~tt~L---EmPD~~nTFVlK~~n~~eyi~ea~d~~q~~sWla~Ir~C~~~ 131 (136)
T 1v5m_A 77 ------LSAI----------IEVRTTMPL---EMPEKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVDS 131 (136)
T ss_dssp ------TTTC----------CBCCCCCCS---SSCCCTTEECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ------hhhh----------hhhhhcccc---ccCCccceEEEEecCCcEEEEEcCCHHHHHHHHHHHHhhcCC
Confidence 0000 112222221 1235679999999886 8999999999999999999988754
No 93
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=97.73 E-value=0.0055 Score=65.79 Aligned_cols=104 Identities=11% Similarity=0.141 Sum_probs=70.4
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
..+++|.|.+.+.. .+.++.|||+|.++-+++..++.... + .
T Consensus 256 ~Li~~G~l~~~~~~-~~k~~~r~~fLF~d~Ll~~k~~~~~~--------------------~-----------------~ 297 (402)
T 2dfk_A 256 ELIYTGEMAWIYQP-YGRNQQRVFFLFDHQMVLCKKDLIRR--------------------D-----------------I 297 (402)
T ss_dssp CEEEEEEEEEESST-TCCCEEEEEEEETTEEEEEEECSSCT--------------------T-----------------C
T ss_pred ceEEeceEEEEecc-CCceEEEEEEeeCCEEEEEEeccccC--------------------C-----------------c
Confidence 57899999887542 24688999999977766654332110 0 0
Q ss_pred cceeeEeecccceeecCCCCCC------CcceEEEeeC--CcEEEEEeCCHHHHHHHHHHHHHHHHHHhc
Q 006831 257 SVARHTVNLLTSTIKPDADQSD------LRFCFRIISP--TKVYTLQAENTLDQMDWIEKINGVIASLLS 318 (629)
Q Consensus 257 ~~~~~~i~l~~~~vk~~~d~~d------rrfcF~Iit~--~rty~LqAeSe~E~~~WI~aI~~aI~~~l~ 318 (629)
-.....+.+..+.+....+..+ -+++|.|..+ ...|+|+|.|++++..||++|+.++..+..
T Consensus 298 ~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~~~~ 367 (402)
T 2dfk_A 298 LYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKETEEVHLFFAKKLEEKIRWLRAFREERKMVQE 367 (402)
T ss_dssp EEEEEEEEGGGEEEEECCSEECSSSCCEESSEEEEEESSSSCEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEeeeeeccceEEEecCCCCccccccccceeEEEEECCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Confidence 1123445555555543222211 2579999986 479999999999999999999999987664
No 94
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=97.70 E-value=0.00032 Score=64.55 Aligned_cols=57 Identities=16% Similarity=0.211 Sum_probs=44.5
Q ss_pred eeEeecccceeecCCCCCCCcceEEEeeCC------cEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006831 260 RHTVNLLTSTIKPDADQSDLRFCFRIISPT------KVYTLQAENTLDQMDWIEKINGVIASLL 317 (629)
Q Consensus 260 ~~~i~l~~~~vk~~~d~~drrfcF~Iit~~------rty~LqAeSe~E~~~WI~aI~~aI~~~l 317 (629)
...+.+.+..+... +...-+|+|.|.++. ++++|+|.|+.|+..||++|+.+|+..-
T Consensus 63 r~~~~L~gm~V~~~-e~e~~p~~~~l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e~~ 125 (140)
T 3qwm_A 63 RQSFSLYGMQVLLF-ENQYYPNGIRLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQ 125 (140)
T ss_dssp EEEECCTTEEEEEE-CCSSCTTEEEEEECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeeecceEEEcc-cCCCCceEEEEEecCCCCcceEEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 34556666656543 334579999999864 6799999999999999999999997654
No 95
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=97.63 E-value=0.0054 Score=66.97 Aligned_cols=105 Identities=13% Similarity=0.169 Sum_probs=70.8
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
..+++|.|.+.+.. .+.++.|||+|.++-+++..++.... + .
T Consensus 333 ~li~~G~l~~~~~~-~~~~~~r~~fLF~d~Ll~~k~~~~~~--------------------~-----------------~ 374 (466)
T 2pz1_A 333 ELIYSGELTRVTQP-QAKSQQRMFFLFDHQLIYCKKDLLRR--------------------D-----------------V 374 (466)
T ss_dssp CEEEEEEEEEECTT-TCCEEEEEEEEETTEEEEEEECSSCT--------------------T-----------------C
T ss_pred eeEEeeeEEEEecC-CCCeeEEEEEEECCEEEEEEeccccC--------------------C-----------------c
Confidence 57899999987542 24688999999977666654332110 0 0
Q ss_pred cceeeEeecccceeecCCCCC------CCcceEEEeeC--CcEEEEEeCCHHHHHHHHHHHHHHHHHHhcc
Q 006831 257 SVARHTVNLLTSTIKPDADQS------DLRFCFRIISP--TKVYTLQAENTLDQMDWIEKINGVIASLLSF 319 (629)
Q Consensus 257 ~~~~~~i~l~~~~vk~~~d~~------drrfcF~Iit~--~rty~LqAeSe~E~~~WI~aI~~aI~~~l~~ 319 (629)
-.....|.+..+.+....+.. ..+++|.|..+ .+.|+|+|.|++++..||++|+.++..+...
T Consensus 375 ~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~~~~~ 445 (466)
T 2pz1_A 375 LYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHRGATGDSHLLCTRKPEQKQRWLKAFAREREQVQLD 445 (466)
T ss_dssp EEEEEEEETTTCEEEECCSBSCCSSCCCBCEEEEEECSSSCCEEEEEESSHHHHHHHHHHHHHHHHHHHTC
T ss_pred eEEeeeeeccceEEEeCCCCcccccccccceeEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHhh
Confidence 112344555555544322221 23589999976 4799999999999999999999999876543
No 96
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=97.61 E-value=0.0016 Score=69.06 Aligned_cols=109 Identities=18% Similarity=0.264 Sum_probs=65.9
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCC----c
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGG----V 252 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~----v 252 (629)
..+++|.|.++... +.|+.|||+|-++-+++..++...... .+|+. .
T Consensus 258 ~li~eG~l~~~~~~--~~~~~~~~fLF~d~Ll~~k~k~~k~~~---------------------------k~~~~~~~~~ 308 (377)
T 3p6a_A 258 KLVHEGPLTWRVTK--DKAVEVHVLLLDDLLLLLQRQDERLLL---------------------------KSHSRTLTPT 308 (377)
T ss_dssp CEEEEEEEEEESSS--SCEEEEEEEEESSEEEEEEEETTEEEC---------------------------CCCCCC----
T ss_pred eEEEECCcEEEecC--CCeEEEEEEeeCCEEEEEEEcCceeEE---------------------------eecccccccC
Confidence 57899999876543 478999999997777666544322100 00000 0
Q ss_pred cccccceeeEeecccceeecCCCCCCCcceEEEee---CCcEEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006831 253 HDEKSVARHTVNLLTSTIKPDADQSDLRFCFRIIS---PTKVYTLQAENTLDQMDWIEKINGVIASL 316 (629)
Q Consensus 253 ~d~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit---~~rty~LqAeSe~E~~~WI~aI~~aI~~~ 316 (629)
.|.+......+.+....++.. ..+.+..|.|.+ +...|.|+|.|.+|++.||..|+.+|..+
T Consensus 309 ~~~k~~~~~~i~l~~~~v~e~--~~~~~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~~~ 373 (377)
T 3p6a_A 309 PDGKTMLRPVLRLTSAMTREV--ATDHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSL 373 (377)
T ss_dssp -----CSCSEEEGGGEEEEEC--TTCTTEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred ccccCCCCCeEechhhhcccc--ccccceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 011111122345555555542 223344455554 23789999999999999999999999753
No 97
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=97.58 E-value=4.5e-05 Score=75.95 Aligned_cols=39 Identities=21% Similarity=0.436 Sum_probs=28.3
Q ss_pred CcceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCC
Q 006831 175 KVQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPW 215 (629)
Q Consensus 175 ~~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~ 215 (629)
...+.++|||+|+++.+ +.|+||||||+++. +.||+...
T Consensus 18 ~~~~~~~g~l~~~~~~~-~~w~~rw~vl~~~~-~~~~~~~~ 56 (228)
T 3tfm_A 18 PGSPYFHSFLYMNGGLM-NSWKRRWCVLKDET-FLWFRSKQ 56 (228)
T ss_dssp ---CCEEEEEEECCTTT-CCCEEEEEEEETTE-EEEESSCC
T ss_pred CCCCceEEEEeecCccc-ccceEEEEEEeCCE-EEEeccCC
Confidence 34578999999997665 88999999999655 55555443
No 98
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=97.57 E-value=0.00037 Score=67.32 Aligned_cols=103 Identities=17% Similarity=0.224 Sum_probs=65.8
Q ss_pred cceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcccc
Q 006831 176 VQTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDE 255 (629)
Q Consensus 176 ~~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~ 255 (629)
...+++|-|.++.+. +.|+.+|++|-++-+++..++..... + .. .+.
T Consensus 69 R~Ll~eG~L~~k~~~--~~~~d~~~fLf~D~Ll~~~~~~~ky~-----~----------------------~~----~~~ 115 (185)
T 2lg1_A 69 KKLVRDGSVFLKNAA--GRLKEVQAVLLTDILVFLQEKDQKYI-----F----------------------AS----LDQ 115 (185)
T ss_dssp SCEEEEEEEEEECTT--CCEEEEEEEEESSEEECCEEETTEEE-----C----------------------CC----CSS
T ss_pred CceeeeceEEEeccC--CCeeeEEEEeecCEEEEEEecCCEEE-----E----------------------Ec----ccC
Confidence 367999999866543 47999999999876666544322110 0 00 000
Q ss_pred ccceeeEeecccceeecCCCCCCCcceEEEee-C---CcEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006831 256 KSVARHTVNLLTSTIKPDADQSDLRFCFRIIS-P---TKVYTLQAENTLDQMDWIEKINGVIASLL 317 (629)
Q Consensus 256 ~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit-~---~rty~LqAeSe~E~~~WI~aI~~aI~~~l 317 (629)
....+.+....|+..+. +.+ .|-+++ . .+.|.|+|.|.+|++.||++|+.+|...-
T Consensus 116 ---~~pvi~L~~~~vre~a~--d~~-~~fli~~~~~g~~~yel~a~s~~er~~W~~~I~~Ai~~~~ 175 (185)
T 2lg1_A 116 ---KSTVISLKKLIVREVAH--EEK-GLFLISMGMTDPEMVEVHASSKEERNSWIQIIQDTINTLN 175 (185)
T ss_dssp ---SCSEEESSSCEEECCSS--CSS-EEEEECCSSSCCCCEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCeEeecceEEeccCC--CCC-eEEEEEecCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhCC
Confidence 11234455555654333 333 444554 2 37999999999999999999999997653
No 99
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=97.56 E-value=0.0059 Score=65.61 Aligned_cols=112 Identities=21% Similarity=0.238 Sum_probs=67.5
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
..+++|.|.++.++ +.|+.|||+|.++-+++..++........... ... |. .+..
T Consensus 294 ~li~eG~l~~~~~~--~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~--------~~~--------------~~-~~~~ 348 (418)
T 3t06_A 294 KMIHEGPLTWRISK--DKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSK--------TAV--------------GS-SDSK 348 (418)
T ss_dssp CEEEEEEEEECCBT--TBCCEEEEEEESSEEEEEEECSSCEECCC-----------------------------------
T ss_pred eeEEeceEEEEeCC--CCeEEEEEEecCCEEEEEEEcCCceEEeeccc--------ccc--------------cC-CCcc
Confidence 57899999987543 46899999999777776655432210000000 000 00 0111
Q ss_pred cceeeEeecccceeecCCCCCCCcceEEEeeC-----CcEEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006831 257 SVARHTVNLLTSTIKPDADQSDLRFCFRIISP-----TKVYTLQAENTLDQMDWIEKINGVIASL 316 (629)
Q Consensus 257 ~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~-----~rty~LqAeSe~E~~~WI~aI~~aI~~~ 316 (629)
-.....|.+....++..+ .....|.|++. .++|+|+|.|.+|++.||++|+.+|..+
T Consensus 349 ~~~k~~i~l~~~~v~~~~---~~~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~~ 410 (418)
T 3t06_A 349 QTFSPVLKLNAVLIRSVA---TDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNA 410 (418)
T ss_dssp -CCCSEEEGGGEEEEECS---SCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred cccCCceechhceecccc---ccCceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhcC
Confidence 112234555555555322 22457888764 2799999999999999999999998643
No 100
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=97.56 E-value=0.0029 Score=66.81 Aligned_cols=111 Identities=22% Similarity=0.257 Sum_probs=66.2
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
..+++|.|.++.. ++.++.|||+|-++-+++..++....... .. ..+..| . .+..
T Consensus 252 ~li~~G~l~~~~~--~~~~~~~~~fLF~d~Ll~~k~~~~k~~~~--~~--------~~~~~~------------~-~~~~ 306 (368)
T 1xcg_A 252 KMIHEGPLTWRIS--KDKTLDLHVLLLEDLLVLLQKQDEKLLLK--CH--------SKTAVG------------S-SDSK 306 (368)
T ss_dssp CEEEEEEEEECCS--SSCCCEEEEEEESSEEEEEEECSSCEECC--C---------------------------------
T ss_pred eEEeecceEeeec--CCCeeEEEEEcccccHHHhhcccccceee--ec--------cccccC------------C-CCcc
Confidence 5789999987643 25689999999977766655443210000 00 000000 0 0000
Q ss_pred cceeeEeecccceeecCCCCCCCcceEEEeeC-----CcEEEEEeCCHHHHHHHHHHHHHHHHH
Q 006831 257 SVARHTVNLLTSTIKPDADQSDLRFCFRIISP-----TKVYTLQAENTLDQMDWIEKINGVIAS 315 (629)
Q Consensus 257 ~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~-----~rty~LqAeSe~E~~~WI~aI~~aI~~ 315 (629)
-.....|.+..+.++..+ +.+.+|.|++. .++|+|+|.|+++++.||++|+.+|..
T Consensus 307 ~~~~~~i~l~~~~v~~~~---~~~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 367 (368)
T 1xcg_A 307 QTFSPVLKLNAVLIRSVA---TDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN 367 (368)
T ss_dssp -CCCSEEEGGGEEEEECS---SCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cCcCCceEccceeeeccc---CCCceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 111234555555454321 22568888864 479999999999999999999999975
No 101
>1zww_A SH3-containing GRB2-like protein 2; coiled coil, transferase; 2.30A {Mus musculus} SCOP: a.238.1.1 PDB: 1x03_A 2d4c_A 1x04_A 2c08_A
Probab=97.50 E-value=0.00047 Score=69.84 Aligned_cols=88 Identities=15% Similarity=0.212 Sum_probs=77.3
Q ss_pred hhhhhhHhHHHHHHHHHHhcccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 006831 7 TVAFNGDGNFVLQAREKFLSLRKSTRMDVAVVIEEDLHNARTSFEQARFNLVGALSNVEAKKRFELLEAVGGTMDAHLRF 86 (629)
Q Consensus 7 ~~~Fe~~q~kyd~~~~ky~slsk~k~~~~~~E~a~eL~~aRk~f~~asldyv~~l~~vq~kk~~e~le~l~~~~~a~~~f 86 (629)
-++++...-+||.++.|+-+. ++++|..++..|..+.-+++..|..+..+. .+++..+..|+.+|+.|
T Consensus 158 rkkl~~~rLdyD~~k~k~~k~-----------~eeEle~A~~~fe~~~e~~~~~m~~l~~~e-~e~~~~L~~~v~aQl~y 225 (256)
T 1zww_A 158 LKKLEGRRLDFGYKKKRQGKI-----------PDEELRQALEKFDESKEIAESSMFNLLEMD-IEQVSQLSALVQAQLEY 225 (256)
T ss_dssp HHHHHHHHHHHHHHHHTTTTS-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccc-----------cHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHH
Confidence 367888899999999886321 478899999999999999999999998764 79999999999999999
Q ss_pred HhhhhHhhhhchHHHHHHHH
Q 006831 87 FKQGYELLHQMEPFINQVLA 106 (629)
Q Consensus 87 f~~g~e~~~~l~p~~~~l~~ 106 (629)
|.++++.+.++.|++.+...
T Consensus 226 ~~~~~e~L~~l~~~l~~~~~ 245 (256)
T 1zww_A 226 HKQAVQILQQVTVRLEERIR 245 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887654
No 102
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=97.47 E-value=0.0006 Score=71.79 Aligned_cols=103 Identities=12% Similarity=0.178 Sum_probs=69.4
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
..+++|.|.+.+ .++.|||+|-++-+++..++... +. +. | +. ...
T Consensus 246 ~li~eG~l~~~g-----~~~~~~~fLF~d~Ll~~k~~~~~-~~----~~----------~-----------~~----~~~ 290 (354)
T 1dbh_A 246 EFIMEGTLTRVG-----AKHERHIFLFDGLMICCKSNHGQ-PR----LP----------G-----------AS----NAE 290 (354)
T ss_dssp CEEEEEEEEETT-----CSSCEEEEEESSEEEEEEECTTC-CC----CT----------T-----------SC----CCS
T ss_pred eEEEEeeEEEEe-----cCceEEEEEeCCEEEEEecCCCC-CC----CC----------C-----------CC----Ccc
Confidence 568999998883 57899999997765554443211 00 00 0 00 000
Q ss_pred cceeeEeecccceeecCCCCCCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 257 SVARHTVNLLTSTIKPDADQSDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 257 ~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
-.....+.+..+.+...++....+++|.|.+++ ..|+|+|.|++++..||++|+.+..
T Consensus 291 y~~k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~~~~~l~a~s~~ek~~W~~~i~~~~~ 349 (354)
T 1dbh_A 291 YRLKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQY 349 (354)
T ss_dssp EEEEEEEESCSCEEEECCCSSSCCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHHT
T ss_pred eeEEEEEeccceEEEeCCcccccCccEEEecCCCCEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 122355666666665544444557999999986 8999999999999999999998865
No 103
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=97.35 E-value=0.026 Score=62.91 Aligned_cols=113 Identities=21% Similarity=0.253 Sum_probs=65.3
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
..+++|.|.++... +.|+.|||+|.++-+++..++.......... .++ ....+.+
T Consensus 411 ~LI~eG~l~~~~~~--~k~~~r~~fLF~D~LL~~k~k~~ky~~k~~~------------------~~~-----~~~~d~k 465 (536)
T 3odw_A 411 KLVHEGPLTWRVTK--DKAVEVHVLLLDDLLLLLQRQDERLLLKSHS------------------RTL-----TPTPDGK 465 (536)
T ss_dssp CEEEEEEEEEESCC-----CEEEEEEESSEEEEEEEETTEEECCCC----------------------------------
T ss_pred eeeeecceEEEecC--CCeeEEEEEEcCCEEEEEEEcCCeEEEeecc------------------ccc-----ccccccc
Confidence 57999999887543 4689999999987777665543221000000 000 0000111
Q ss_pred cceeeEeecccceeecCCCCCCCcceEEEeeC----CcEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006831 257 SVARHTVNLLTSTIKPDADQSDLRFCFRIISP----TKVYTLQAENTLDQMDWIEKINGVIASLL 317 (629)
Q Consensus 257 ~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~----~rty~LqAeSe~E~~~WI~aI~~aI~~~l 317 (629)
......|.+....++..+. + ..+|.|+.. ..+|.|+|.|.+|++.||+.|+.+|..+.
T Consensus 466 ~~~~~~i~L~~l~v~e~~~--d-~~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~~ 527 (536)
T 3odw_A 466 TMLRPVLRLTSAMTREVAT--D-HKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLK 527 (536)
T ss_dssp -CCCSEEEGGGEEEEECTT--C-TTEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHTSC
T ss_pred cccCceeecccceeecccc--c-CCceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhCC
Confidence 1112345555555554322 2 344555543 37999999999999999999999997654
No 104
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=97.18 E-value=0.033 Score=58.61 Aligned_cols=109 Identities=19% Similarity=0.288 Sum_probs=67.8
Q ss_pred ceeEeeeeeeccCC--C--------CCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCcccccccccccc
Q 006831 177 QTIKQGYLSKRSSN--L--------RADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSS 246 (629)
Q Consensus 177 ~~iKqGyL~Krs~~--~--------~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~ 246 (629)
..+++|.|.+.... . +..++.|||+|-++-+++..+.... | .|... ..
T Consensus 209 ~ll~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~---~----------------~~~~~---~~ 266 (353)
T 1kz7_A 209 KLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREEN---G----------------EGYEK---AP 266 (353)
T ss_dssp CEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCC---C----------------SSCCC---SC
T ss_pred hhheecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEecccc---c----------------cCCCC---CC
Confidence 46889998753211 0 2357899999998776665543311 0 00000 00
Q ss_pred ccCCCccccccceeeEeecccceeecCCCCCCCcceEEEeeC--CcEEEEEeCCHHHHHHHHHHHHHHHHHHhc
Q 006831 247 HYHGGVHDEKSVARHTVNLLTSTIKPDADQSDLRFCFRIISP--TKVYTLQAENTLDQMDWIEKINGVIASLLS 318 (629)
Q Consensus 247 ~~~g~v~d~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~--~rty~LqAeSe~E~~~WI~aI~~aI~~~l~ 318 (629)
. -.....+.+....+....+ +.+++|.|... ..+|+|+|.|+++++.|+++|+.+|.....
T Consensus 267 ~---------y~~k~~i~l~~~~v~e~~~--~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~ 329 (353)
T 1kz7_A 267 S---------YSYKQSLNMTAVGITENVK--GDTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTSQLQ 329 (353)
T ss_dssp E---------EEEEEEEEGGGEEEECCBT--TBTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred e---------EEEEEEeEcccceeeEcCC--CCCceEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 0123445554444443222 23688999874 478999999999999999999999977654
No 105
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=97.12 E-value=0.0016 Score=59.21 Aligned_cols=38 Identities=21% Similarity=0.423 Sum_probs=32.5
Q ss_pred CcceEEEeeCC--cEEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006831 279 LRFCFRIISPT--KVYTLQAENTLDQMDWIEKINGVIASL 316 (629)
Q Consensus 279 rrfcF~Iit~~--rty~LqAeSe~E~~~WI~aI~~aI~~~ 316 (629)
...||.|+..+ +++.|.|+|+++++.|+.+|+..+...
T Consensus 84 ~~~~FsIiy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~~~~ 123 (131)
T 1mai_A 84 EDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKIIHHS 123 (131)
T ss_dssp GGGEEEEEESSSCCCEEEECSSHHHHHHHHHHHHHHHC--
T ss_pred ccceEEEEECCCCceEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 46899999887 699999999999999999999877543
No 106
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=97.10 E-value=0.08 Score=56.10 Aligned_cols=116 Identities=19% Similarity=0.206 Sum_probs=67.8
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
..+++|.|.++... +.++.|||+|.++-+++..++.... ...... + .+ ....+..
T Consensus 256 ~li~eG~l~~~~~~--~~~~~~~~fLF~d~Ll~~k~~~~~~--~~~~~~--~--------------~~-----~~~~~~~ 310 (385)
T 1txd_A 256 KMIHEGPLVWKVNR--DKTIDLYTLLLEDILVLLQKQDDRL--VLRCHS--K--------------IL-----ASTADSK 310 (385)
T ss_dssp CEEEEEEEEEESSS--SCBCCEEEEEESSEEEEEEEETTEE--ECCC---------------------------------
T ss_pred eEEEECcEEEEcCC--CCeEEEEEEecCCeeEEEEecCCee--EEeecc--c--------------cc-----cccCCCC
Confidence 57899999876433 4689999999977766655432210 000000 0 00 0000001
Q ss_pred cceeeEeecccceeecCCCCCCCcceEEEeeC---CcEEEEEeCCHHHHHHHHHHHHHHHHHHhcc
Q 006831 257 SVARHTVNLLTSTIKPDADQSDLRFCFRIISP---TKVYTLQAENTLDQMDWIEKINGVIASLLSF 319 (629)
Q Consensus 257 ~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~---~rty~LqAeSe~E~~~WI~aI~~aI~~~l~~ 319 (629)
......+.+..+.++..+ .+.+.+|.|... .++|+|+|.|+++++.||++|+.+|...-..
T Consensus 311 ~~~~~~i~l~~~~v~~~~--~d~~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~~~~ 374 (385)
T 1txd_A 311 HTFSPVIKLSTVLVRQVA--TDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQ 374 (385)
T ss_dssp -CCCSEEEGGGEEEEECC--C-CCEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCceecccccccccc--cCCceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhccCC
Confidence 112344555555554322 233566766643 3799999999999999999999999887543
No 107
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=97.10 E-value=7.5e-05 Score=82.35 Aligned_cols=115 Identities=22% Similarity=0.232 Sum_probs=0.0
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCC-CcCCCcccccCCCCCCccccccccccccccCCCcccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWN-SAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDE 255 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~-~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~ 255 (629)
..+++|.|.+. +.++.|||+|.++-+++........+ .|.. .++..-....|
T Consensus 252 ~li~eG~l~~~-----~~~~~~~~fLF~d~Ll~~k~~~~~~~~~g~~---------------~~f~~~~~~~~------- 304 (510)
T 3jzy_A 252 KLLHSGKLYKT-----KSNKELHGFLFNDFLLLTYMVKQFAVSSGSE---------------KLFSSKSNAQF------- 304 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeEEeceEEEc-----CCCcEEEEEcccceeEEeeecccccccCCcc---------------cccCcccccce-------
Confidence 45788888765 35789999999777666443222100 0000 00000000000
Q ss_pred ccceeeEeecccceeecCCCCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHHHHHHHhcc
Q 006831 256 KSVARHTVNLLTSTIKPDADQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKINGVIASLLSF 319 (629)
Q Consensus 256 ~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~aI~~~l~~ 319 (629)
.+....|.+....+....+..+.+++|+|.++.++|+|+|.|++++..||++|+.+|......
T Consensus 305 -~v~k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~~ 367 (510)
T 3jzy_A 305 -KMYKTPIFLNEVLVKLPTDPSSDEPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQYIDT 367 (510)
T ss_dssp ----------------------------------------------------------------
T ss_pred -eEEcCceehhheEEeccCCCCccccceeeeccceeEEeccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 111233444444444333344568999999999999999999999999999999999877654
No 108
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=97.03 E-value=0.0014 Score=64.50 Aligned_cols=96 Identities=19% Similarity=0.341 Sum_probs=60.4
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEec-----Cc-eEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCC
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDS-----RG-LLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHG 250 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~-----~g-lLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g 250 (629)
..+.||+...|.+ |.||+||+||+. +. .|.-|++..++..+.
T Consensus 8 ~~v~eg~vk~r~~---KkWk~rw~vlrk~s~~adcl~L~vYkd~~dr~k~~----------------------------- 55 (224)
T 3ml4_A 8 AALVEGQVKLRDG---KKWKSRWLVLRKPSPVADCLLMLVYKDKCERSKGL----------------------------- 55 (224)
T ss_dssp CCSEEEEEEEC------CCEEEEEEEECSSTTSSCEEEEEESSSHHHHSCC-----------------------------
T ss_pred ceeEEEeeeeecC---CceeeEEEEEEcCCCchheEEEEEEcChhhhhcCC-----------------------------
Confidence 4567899998853 579999999984 23 466676554431110
Q ss_pred CccccccceeeEeeccc-ceeecCCCCCCCcceEEEeeCCcEEEEEeCCHHHHHHHHHHHHH
Q 006831 251 GVHDEKSVARHTVNLLT-STIKPDADQSDLRFCFRIISPTKVYTLQAENTLDQMDWIEKING 311 (629)
Q Consensus 251 ~v~d~~~~~~~~i~l~~-~~vk~~~d~~drrfcF~Iit~~rty~LqAeSe~E~~~WI~aI~~ 311 (629)
.....+.|.. +.+.....-...++.+.|+..+.+++|.+|+++.+..|-..|+.
T Consensus 56 -------~~KaslsL~~~~GlE~g~~ldk~s~TlAIIc~d~~~vLAFds~e~l~~W~~~l~~ 110 (224)
T 3ml4_A 56 -------RERSSLTLEDICGLEPALPYEGLAHTLAIICLSQAVMLGFDSHEAMCAWDTRIRY 110 (224)
T ss_dssp -------CCSEEEEECCEEEEEEEEEETTEEEEEEEEESSCEEEEECSSHHHHHHHHHHHHH
T ss_pred -------cccceeehHHhcCccccccccCcccEEEEEecCcEEEEEeCCHHHHHHHHHHHhh
Confidence 0011122211 11211111223479999999999999999999999999988765
No 109
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=96.95 E-value=0.0064 Score=62.76 Aligned_cols=103 Identities=17% Similarity=0.153 Sum_probs=65.1
Q ss_pred ceeEeeeeeeccCC-CCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCcccc
Q 006831 177 QTIKQGYLSKRSSN-LRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDE 255 (629)
Q Consensus 177 ~~iKqGyL~Krs~~-~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~ 255 (629)
..+.+|-+....+. ..+..+.|+|+|-++-+++-.+..... +. ..
T Consensus 202 ~li~~~~~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~--~~------------------------~~-------- 247 (311)
T 1nty_A 202 ELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSS--GR------------------------SK-------- 247 (311)
T ss_dssp CEEEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEECTT--CC------------------------EE--------
T ss_pred CceeeeeEEEEcCcccccccceeEEEeccCeEEEEEeeccCC--CC------------------------ce--------
Confidence 35667766654332 335689999999977666544332110 00 00
Q ss_pred ccceeeEeecccceeecCCCCCCCcceEEEee-----CCcEEEEEeCCHHHHHHHHHHHHHHHHHH
Q 006831 256 KSVARHTVNLLTSTIKPDADQSDLRFCFRIIS-----PTKVYTLQAENTLDQMDWIEKINGVIASL 316 (629)
Q Consensus 256 ~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit-----~~rty~LqAeSe~E~~~WI~aI~~aI~~~ 316 (629)
-.....+.+..+.+....+ +.+++|.|.. +...|+|+|.|++++..|+++|+.+|...
T Consensus 248 -y~~k~~i~l~~~~v~e~~~--~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e~ 310 (311)
T 1nty_A 248 -YLYKSKLFTSELGVTEHVE--GDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQER 310 (311)
T ss_dssp -EEEEEEEEGGGEEEECCCT--TCTTEEEEEESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred -eEEeeeeeccceeeEEccC--CCCceEEEEeCCCCCCCceEEEECCCHHHHHHHHHHHHHHHhhh
Confidence 0123445555555543222 2368899987 34789999999999999999999999753
No 110
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=96.78 E-value=0.0038 Score=65.36 Aligned_cols=35 Identities=23% Similarity=0.473 Sum_probs=31.1
Q ss_pred CcceEEEee----CCcEEEEEeCCHHHHHHHHHHHHHHH
Q 006831 279 LRFCFRIIS----PTKVYTLQAENTLDQMDWIEKINGVI 313 (629)
Q Consensus 279 rrfcF~Iit----~~rty~LqAeSe~E~~~WI~aI~~aI 313 (629)
.+++|.|.. +..+|+|+|.|+++++.||++|+.+|
T Consensus 307 ~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai 345 (346)
T 2z0q_A 307 VKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAK 345 (346)
T ss_dssp TSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhh
Confidence 368999985 35799999999999999999999887
No 111
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=96.70 E-value=0.012 Score=62.04 Aligned_cols=105 Identities=13% Similarity=0.171 Sum_probs=63.8
Q ss_pred ceeEeeeeeeccCC----CCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCc
Q 006831 177 QTIKQGYLSKRSSN----LRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGV 252 (629)
Q Consensus 177 ~~iKqGyL~Krs~~----~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v 252 (629)
..+++|-+....+. ..+.++.|||+|.++-+++-....... .|. .
T Consensus 206 ~Ll~~g~~~v~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~-~~~-~----------------------------- 254 (354)
T 2rgn_B 206 KLLGQDTFWVTEPEAGGLLSSRGRERRVFLFEQIIIFSEALGGGV-RGG-T----------------------------- 254 (354)
T ss_dssp CEEEEEEEEEECC-------CCCCEEEEEEESSEEEEEEECC--------------------------------------
T ss_pred cccccceEEEEcCCcCccccCCCceEEEEEeCCcEEEEEeccCCC-CCC-C-----------------------------
Confidence 46778877654322 235689999999977666654432210 000 0
Q ss_pred cccccceeeEeecccceeecCCCCCCCcceEEEeeC-----CcEEEEEeCCHHHHHHHHHHHHHHHHH
Q 006831 253 HDEKSVARHTVNLLTSTIKPDADQSDLRFCFRIISP-----TKVYTLQAENTLDQMDWIEKINGVIAS 315 (629)
Q Consensus 253 ~d~~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~-----~rty~LqAeSe~E~~~WI~aI~~aI~~ 315 (629)
...-.....+.+....+....+ +.+++|.|... ...|+|+|.|+++++.||.+|+.+|..
T Consensus 255 -~~~y~~k~~i~l~~~~v~~~~~--~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 319 (354)
T 2rgn_B 255 -QPGYVYKNSIKVSCLGLEGNLQ--GDPCRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILES 319 (354)
T ss_dssp --CCEEEEEEEEGGGEEEEESGG--GCTTEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred -CCceEEcceeeccceeeeeccC--CCCceEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 0001123445555555543211 23688999863 368999999999999999999999965
No 112
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=96.52 E-value=0.012 Score=58.79 Aligned_cols=97 Identities=15% Similarity=0.109 Sum_probs=77.1
Q ss_pred hhhhhHhHHHHHHHHHHhcccCCC--CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 006831 8 VAFNGDGNFVLQAREKFLSLRKST--RMDVAVVIEEDLHNARTSFEQARFNLVGALSNVEAKKRFELLEAVGGTMDAHLR 85 (629)
Q Consensus 8 ~~Fe~~q~kyd~~~~ky~slsk~k--~~~~~~E~a~eL~~aRk~f~~asldyv~~l~~vq~kk~~e~le~l~~~~~a~~~ 85 (629)
++-+...-+||.++.++.++.+++ ++..+..++++|..++..|....=+|...|..+...+.--+...+..|+.+|..
T Consensus 151 kKR~~k~lDyD~~~~~l~kl~~k~~kd~~kl~kae~el~~ak~~ye~ln~~L~~eLp~l~~~~~~~~~~~l~~f~~~Q~~ 230 (251)
T 2fic_A 151 AKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEEN 230 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566778999888888776555 456778899999999999998888888999999887774455588899999999
Q ss_pred HHhhhhHhhhhchHHHHHH
Q 006831 86 FFKQGYELLHQMEPFINQV 104 (629)
Q Consensus 86 ff~~g~e~~~~l~p~~~~l 104 (629)
||.+.++.+.+|.+-|..|
T Consensus 231 f~~~~~~~~~~L~~~l~~~ 249 (251)
T 2fic_A 231 FHKEMSKLNQNLNDVLVGL 249 (251)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9999999999988877655
No 113
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=96.40 E-value=0.014 Score=70.22 Aligned_cols=105 Identities=12% Similarity=0.177 Sum_probs=68.3
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCC-CCcCCCcccccCCCCCCccccccccccccccCCCcccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSW-NSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDE 255 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~-~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~ 255 (629)
..+++|.|.+.+++ +.|||+|.++-+++..++.... ..|. . ..
T Consensus 443 ~Li~eG~l~~~~~k-----~~r~~FLF~D~Ll~~K~~~~~~~~~g~------------------------------~-~~ 486 (1049)
T 3ksy_A 443 EFIMEGTLTRVGAK-----HERHIFLFDGLMICCKSNHGQPRLPGA------------------------------S-NA 486 (1049)
T ss_dssp CCCCEEEEEETTCS-----SCEEEEEETTEEEEEECCTTCCCCTTS------------------------------C-CC
T ss_pred eEEEeceEEEEccC-----ceEEEEeeCCeEEEEEecCccCCCCCC------------------------------C-CC
Confidence 46789999887533 7899999977666654432211 0000 0 00
Q ss_pred ccceeeEeecccceeecCCCCCCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006831 256 KSVARHTVNLLTSTIKPDADQSDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIASLL 317 (629)
Q Consensus 256 ~~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~~~l 317 (629)
.-.....+.+....+....+....+++|.|...+ ..|+|+|.|+++++.||++|+.+..+..
T Consensus 487 ~y~~k~~i~L~~l~V~~~~d~~~~~~~F~I~~~~~~~~~L~A~S~eeK~~Wi~~I~~~q~k~~ 549 (1049)
T 3ksy_A 487 EYRLKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQYRST 549 (1049)
T ss_dssp SCCCCCEECCSSCCCCCCCCSSSCCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEcCceEEEECCCCccccceEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 0112344555555554433444568999999876 4999999999999999999998875443
No 114
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=96.37 E-value=0.61 Score=49.06 Aligned_cols=60 Identities=12% Similarity=0.284 Sum_probs=42.7
Q ss_pred eeEeecccceeecCCCCC-CCcceEEEe--------eCCcEEEEEeCCHHHHHHHHHHHHHHHHHHhcc
Q 006831 260 RHTVNLLTSTIKPDADQS-DLRFCFRII--------SPTKVYTLQAENTLDQMDWIEKINGVIASLLSF 319 (629)
Q Consensus 260 ~~~i~l~~~~vk~~~d~~-drrfcF~Ii--------t~~rty~LqAeSe~E~~~WI~aI~~aI~~~l~~ 319 (629)
...+.+....|...++.. +....|+|. .+.++|+|+|.|++++..||++|+.+|....+.
T Consensus 303 k~~i~l~~~~v~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~~~~~ 371 (377)
T 1foe_A 303 RHMIPTEALQVRALPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDKHRR 371 (377)
T ss_dssp EEEEEGGGEEEECCCCTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeccccceEEEecCCCccchhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhHHhhh
Confidence 455666666665433322 223458886 356899999999999999999999999765543
No 115
>1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1
Probab=96.15 E-value=0.033 Score=55.09 Aligned_cols=98 Identities=14% Similarity=0.136 Sum_probs=79.2
Q ss_pred hhhhHhHHHHHHHHHHhcccC----CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 006831 9 AFNGDGNFVLQAREKFLSLRK----STRMDVAVVIEEDLHNARTSFEQARFNLVGALSNVEAKKRFELLEAVGGTMDAHL 84 (629)
Q Consensus 9 ~Fe~~q~kyd~~~~ky~slsk----~k~~~~~~E~a~eL~~aRk~f~~asldyv~~l~~vq~kk~~e~le~l~~~~~a~~ 84 (629)
+-+...-+||.++.++.++.. ++++..+..++++|..++..|....=.|...|..+...+.-.+...+..|+.+|.
T Consensus 137 KR~~k~lDyD~~~~~l~kl~~k~~k~kd~~kl~~ae~el~~ak~~ye~ln~~L~~eLp~l~~~~~~~~~~~l~~fv~~q~ 216 (244)
T 1uru_A 137 KRNRKLIDYDGQRHSFQNLQANANKRKDDVKLTKGREQLEEARRTYEILNTELHDELPALYDSRILFLVTNLQTLFATEQ 216 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCBTTBCCTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556779998888877663 3456666778899999999999888888899999988777566778889999999
Q ss_pred HHHhhhhHhhhhchHHHHHHHH
Q 006831 85 RFFKQGYELLHQMEPFINQVLA 106 (629)
Q Consensus 85 ~ff~~g~e~~~~l~p~~~~l~~ 106 (629)
.||.+..+.+..|.+.+..+..
T Consensus 217 ~~~~~~~~~~~~l~~~~~~l~~ 238 (244)
T 1uru_A 217 VFHNETAKIYSELEAIVDKLAT 238 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 9999998888888777777654
No 116
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=94.75 E-value=0.1 Score=59.74 Aligned_cols=94 Identities=21% Similarity=0.429 Sum_probs=55.6
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
.+++.||+.|+++-....|+||++.|..+++-. ...... + ..+
T Consensus 558 ~~i~~G~~~k~~g~f~~~~~rR~~~l~p~r~e~-~~e~~~-~------------------~~l----------------- 600 (689)
T 3v5w_A 558 DCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEW-RGEGEA-P------------------QSL----------------- 600 (689)
T ss_dssp CCCEEEEEEEC-------CEEEEEEEETTEEEE-ECTTSC-C------------------CEE-----------------
T ss_pred cceeecccccCCCcccchhhhhccccCCCcccc-cccCCC-C------------------cce-----------------
Confidence 467899999997766578999999998655433 211110 0 000
Q ss_pred cceeeEeecccceeecCCCCCCCcceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 257 SVARHTVNLLTSTIKPDADQSDLRFCFRIISPT-KVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 257 ~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
.....+. .+. .......+||.+...+ ++|.+++.|+.++.+|+..|+.+-.
T Consensus 601 -~~~~~v~----~v~--k~~i~~~~~l~~~~k~~k~f~~~t~~~~~~~~W~~~i~~~~~ 652 (689)
T 3v5w_A 601 -LTMEEIQ----SVE--ETQIKERKCLLLKIRGGKQFILQCDSDPELVQWKKELRDAYR 652 (689)
T ss_dssp -EEGGGEE----EEE--EEESSSCEEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred -eeecccc----ccc--cCcCCCCcceeeeecCCcEEEEECCChHHHHHHHHHHHHHHH
Confidence 0000010 010 0112335789888776 8999999999999999999998764
No 117
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=94.64 E-value=2.3 Score=49.32 Aligned_cols=91 Identities=14% Similarity=0.277 Sum_probs=54.3
Q ss_pred eeEeeeeeeccCCC-CCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 178 TIKQGYLSKRSSNL-RADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 178 ~iKqGyL~Krs~~~-~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
+++.|||....... ++.=|..||||....+-||..+.+..
T Consensus 540 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------- 580 (772)
T 3zvr_A 540 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKE--------------------------------------- 580 (772)
T ss_dssp EEEEEEEEESSSCCC---CCEEEEEEESSEEEEESSTTCCC---------------------------------------
T ss_pred ceeeeeeeecccccccCCCccceeeccccccccccchhhhc---------------------------------------
Confidence 89999999865553 45678899999977766554433221
Q ss_pred cceeeEeecccceeecC-CCCCCCcceEEEeeCC--------cEEEEEeCCHHHHHHHHHHH
Q 006831 257 SVARHTVNLLTSTIKPD-ADQSDLRFCFRIISPT--------KVYTLQAENTLDQMDWIEKI 309 (629)
Q Consensus 257 ~~~~~~i~l~~~~vk~~-~d~~drrfcF~Iit~~--------rty~LqAeSe~E~~~WI~aI 309 (629)
..-.+.+....++.. .---.+++.|.|..++ |.+-|.|+|.++.+.|...+
T Consensus 581 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 640 (772)
T 3zvr_A 581 --KKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASF 640 (772)
T ss_dssp --EEEEEECTTEEEEEC-------CEEEEEEETTSSCSBTTBSEEEEEESSHHHHHHHHHHH
T ss_pred --ccccccccccccchhhhccccccccccccCCccccccchhhhhhhhccccccchhhHHhh
Confidence 011122222222211 0012356889888765 47889999999999998654
No 118
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=94.41 E-value=0.043 Score=51.23 Aligned_cols=46 Identities=22% Similarity=0.224 Sum_probs=37.0
Q ss_pred hHHHHHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 540 SVAQQLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 540 ~~~~~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
+++++|+.|++.+|++.+-. |+..|||||.... .+.||||+|+..+
T Consensus 3 dlg~~L~~Aa~~G~~~~v~~-Ll~~Gadvn~~d~--~g~t~l~~a~~~~ 48 (169)
T 4gpm_A 3 ELGKRLIEAAENGNKDRVKD-LIENGADVNASDS--DGRTPLHHAAENG 48 (169)
T ss_dssp HHHHHHHHHHHTTCHHHHHH-HHHTTCCTTCCCT--TSCCHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHH-HHHCCCCCCCcCC--CCCCHHHHHHHcC
Confidence 67889999999999987764 4588999998754 4678888887766
No 119
>4a3a_A Amphiphysin; structural genomics, invagination, knobs-IN-holes, curvature membrane, structural genomics consortium; 1.78A {Homo sapiens} PDB: 4atm_A 3sog_A
Probab=93.83 E-value=0.76 Score=45.84 Aligned_cols=94 Identities=15% Similarity=0.153 Sum_probs=73.2
Q ss_pred hHhHHHHHHHHHHhcccC--CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHHHh
Q 006831 12 GDGNFVLQAREKFLSLRK--STRMDVAVVIEEDLHNARTSFEQARFNLVGALSNVEAKKRFELLEA-VGGTMDAHLRFFK 88 (629)
Q Consensus 12 ~~q~kyd~~~~ky~slsk--~k~~~~~~E~a~eL~~aRk~f~~asldyv~~l~~vq~kk~~e~le~-l~~~~~a~~~ff~ 88 (629)
...-+||.++.++-+|.. +|++..+..++++|..|+..|...-=.|+-.|..+-.-. +.|+.+ +-+|+..|.+||.
T Consensus 141 ~KllDYD~~~~k~~kL~~K~~kd~~kl~kae~el~~Ak~~Ye~lN~~L~eELP~l~~~r-~~~~~~~~~s~i~~Q~~f~~ 219 (243)
T 4a3a_A 141 RKLVDYDSARHHLEALQSSKRKDESRISKAEEEFQKAQKVFEEFNVDLQEELPSLWSRR-VGFYVNTFKNVSSLEAKFHK 219 (243)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 345678999888876653 346666778999999999999999888999998885543 466665 5688999999999
Q ss_pred hhhHhhhhchHHHHHHHH
Q 006831 89 QGYELLHQMEPFINQVLA 106 (629)
Q Consensus 89 ~g~e~~~~l~p~~~~l~~ 106 (629)
.-..+..+|.+-|.++..
T Consensus 220 e~~k~~~~l~~~~~~~~~ 237 (243)
T 4a3a_A 220 EIAVLCHKLYEVMTKLGD 237 (243)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHh
Confidence 988888887777766654
No 120
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=93.57 E-value=0.12 Score=52.41 Aligned_cols=52 Identities=15% Similarity=0.221 Sum_probs=39.4
Q ss_pred EeecccceeecC--CCCCCCcceEEEeeCC--cEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 262 TVNLLTSTIKPD--ADQSDLRFCFRIISPT--KVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 262 ~i~l~~~~vk~~--~d~~drrfcF~Iit~~--rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
.+.|..|.+... ..+. +.++|+|.+++ .+..|+|++.+++.+|+.+|+.+|.
T Consensus 207 ~ipL~m~~~tR~~~~~d~-~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i~ 262 (263)
T 1z87_A 207 HVSLKMAYVSRRCTPTDP-EPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 262 (263)
T ss_dssp EEESSSEEEEEECCSSCS-SSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred ccCcceeeeeeeccccCC-CCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHhc
Confidence 455555544221 2222 78999999997 5799999999999999999998873
No 121
>4avm_A Bridging integrator 2; protein binding, plasma membrane, BAR adaptor; 1.91A {Homo sapiens}
Probab=93.43 E-value=0.78 Score=45.54 Aligned_cols=95 Identities=14% Similarity=0.147 Sum_probs=74.5
Q ss_pred hhHhHHHHHHHHHHhcccCC--CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHHH
Q 006831 11 NGDGNFVLQAREKFLSLRKS--TRMDVAVVIEEDLHNARTSFEQARFNLVGALSNVEAKKRFELLEA-VGGTMDAHLRFF 87 (629)
Q Consensus 11 e~~q~kyd~~~~ky~slsk~--k~~~~~~E~a~eL~~aRk~f~~asldyv~~l~~vq~kk~~e~le~-l~~~~~a~~~ff 87 (629)
+...-+||.+++++.++..+ |++..+..++++|..|+..|...-=.|.-.|..+-... +.|+.+ +-.++..+.+||
T Consensus 135 ~~kllDyd~~~~~~~kl~~k~~kd~~kl~kae~el~~a~~~ye~lN~~L~~eLP~l~~~~-~~~~~~~~~~~i~~q~~f~ 213 (237)
T 4avm_A 135 GRKLVDYDSARHHLEAVQNAKKKDEAKTAKAEEEFNKAQTVFEDLNQELLEELPILYNSR-IGCYVTIFQNISNLRDVFY 213 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 45566888888888876544 45666678899999999999999988999998885544 467765 558889999999
Q ss_pred hhhhHhhhhchHHHHHHHH
Q 006831 88 KQGYELLHQMEPFINQVLA 106 (629)
Q Consensus 88 ~~g~e~~~~l~p~~~~l~~ 106 (629)
..-..+...|.+-|.+|..
T Consensus 214 ~~~~~~~~~l~~~~~~~~~ 232 (237)
T 4avm_A 214 REMSKLNHNLYEVMSKLER 232 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHH
Confidence 9888888888777777765
No 122
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=93.08 E-value=0.18 Score=48.04 Aligned_cols=53 Identities=15% Similarity=0.223 Sum_probs=40.9
Q ss_pred eEeecccceeec--CCCCCCCcceEEEeeCC--cEEEEEeCCHHHHHHHHHHHHHHHH
Q 006831 261 HTVNLLTSTIKP--DADQSDLRFCFRIISPT--KVYTLQAENTLDQMDWIEKINGVIA 314 (629)
Q Consensus 261 ~~i~l~~~~vk~--~~d~~drrfcF~Iit~~--rty~LqAeSe~E~~~WI~aI~~aI~ 314 (629)
..|.|.-|-+.. ...+. ++.+|+|.+++ .+.+|+|.+..+..+|+.+|+..|.
T Consensus 121 ~~IPLkMayvtR~~~~tD~-e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni~ 177 (178)
T 2adz_A 121 KHVSLKMAYVSRRCTPTDP-EPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 177 (178)
T ss_dssp EEEETTTCEEEEECCSSCC-SSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHHT
T ss_pred eeecHHHHHHHHhccCCCC-CccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhcc
Confidence 456676665522 12233 67899999998 5889999999999999999998874
No 123
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=92.74 E-value=0.077 Score=54.11 Aligned_cols=45 Identities=24% Similarity=0.184 Sum_probs=36.1
Q ss_pred HHHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 543 QQLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 543 ~~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
..|+.||+.+|++.|- +|+..|||||....+ .+.||||+|+..+.
T Consensus 27 t~L~~Av~~g~~~~V~-~LL~~Gadvn~~~~~-~g~TpLh~A~~~g~ 71 (337)
T 4g8k_A 27 HLLIKAVQNEDVDLVQ-QLLEGGANVNFQEEE-GGWTPLHNAVQMSR 71 (337)
T ss_dssp HHHHHHHHTTCHHHHH-HHHHHTCCTTCCCTT-TCCCHHHHHHHTTC
T ss_pred hHHHHHHHcCCHHHHH-HHHHCCCCCCccCCC-CCcCHHHHHHHcCC
Confidence 4689999999998765 556889999987543 46899999998773
No 124
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=91.64 E-value=0.37 Score=42.89 Aligned_cols=100 Identities=12% Similarity=0.186 Sum_probs=62.3
Q ss_pred ceeEeeeeeeccCCCCCCceeEEEEEecCceEEEEeCCCCCCCcCCCcccccCCCCCCccccccccccccccCCCccccc
Q 006831 177 QTIKQGYLSKRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSSIQRSNPSETSQGLLSRWLSSHYHGGVHDEK 256 (629)
Q Consensus 177 ~~iKqGyL~Krs~~~~k~WkRRwFvL~~~glLyYy~~~~~~~~g~~~~~~~~~~~~~~~g~g~l~~~~~~~~~g~v~d~~ 256 (629)
..+++|++....+. +.=+.|+++|....+|+.... .. .+. ..|
T Consensus 9 ~Ll~q~~f~V~~~~--~k~~eR~vFLFe~~ilf~K~~-~~--~~~------------------------~~Y-------- 51 (119)
T 1fho_A 9 RIIRHDAFQVWEGD--EPPKLRYVFLFRNKIMFTEQD-AS--TSP------------------------PSY-------- 51 (119)
T ss_dssp CSSEEEEEEECSTT--CSCEEEEEEEETTEEEEEEEC-CS--SSS------------------------CCC--------
T ss_pred CccccCceEEEeCC--CCcceEEEEEecCcEEEEEEe-cC--CCC------------------------CcE--------
Confidence 46788888877543 235779999997766665443 11 000 001
Q ss_pred cceeeEeecccceeecCCCCCCCcceEEEeeCC--cEEEE--EeCCHH-HHHHHHHHHHHHHHH
Q 006831 257 SVARHTVNLLTSTIKPDADQSDLRFCFRIISPT--KVYTL--QAENTL-DQMDWIEKINGVIAS 315 (629)
Q Consensus 257 ~~~~~~i~l~~~~vk~~~d~~drrfcF~Iit~~--rty~L--qAeSe~-E~~~WI~aI~~aI~~ 315 (629)
.....|.+....+....++ +.+..|+|-.+. ..|.+ ||.|.+ ..+.|+..|+..+..
T Consensus 52 -~~K~~ikl~~~~lte~~~~-~d~~kFeiw~~~~~~~~il~~qA~s~e~~K~~Wv~~I~~~~~~ 113 (119)
T 1fho_A 52 -THYSSIRLDKYNIRQHTTD-EDTIVLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQEK 113 (119)
T ss_dssp -SSCCEEESSSCEEEEECTT-CCEEEEECCSTTCCCBCCCCCSSSSCSHHHHHHHHHHHTCCHH
T ss_pred -EEeeEEeeceeEEEecCCC-CCCcEEEEccCCCCceEEEeeecCCcHHHHHHHHHHHHHHHHH
Confidence 1123444444455443331 235679998776 47888 999999 999999999874443
No 125
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=91.34 E-value=0.17 Score=47.91 Aligned_cols=43 Identities=9% Similarity=0.068 Sum_probs=34.3
Q ss_pred HHHHHHhcCCHH---HHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKK---AVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~---~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
-|+.|+..++.. .++++|+..|||||.... .+.||||+|+..+
T Consensus 41 ~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~--~g~TpLh~a~~~~ 86 (186)
T 3t8k_A 41 ILYDVLRNNNDEARYKISMFLINKGADIKSRTK--EGTTLFFPLFQGG 86 (186)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCT--TCCCTHHHHHHHC
T ss_pred HHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCC--CCCcHHHHHHHcC
Confidence 477888888865 477888899999999763 5789999987654
No 126
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=89.59 E-value=0.37 Score=39.24 Aligned_cols=41 Identities=22% Similarity=0.168 Sum_probs=20.0
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++++.+- .|+..|+|+|.... .+.||||+|+..+
T Consensus 6 L~~A~~~~~~~~v~-~Ll~~g~~~n~~d~--~g~t~L~~A~~~~ 46 (93)
T 1n0q_A 6 LHLAARNGHLEVVK-LLLEAGADVNAKDK--NGRTPLHLAARNG 46 (93)
T ss_dssp HHHHHHHTCHHHHH-HHHHTTCCTTCCCT--TSCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHHH-HHHHcCCCCcccCC--CCCCHHHHHHHcC
Confidence 34455555554332 33355555555432 2455666555444
No 127
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=88.16 E-value=0.6 Score=39.42 Aligned_cols=44 Identities=20% Similarity=0.233 Sum_probs=29.2
Q ss_pred HHHHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 542 AQQLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 542 ~~~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
...|+.|+..++++.+- .|+..|+|+|.... .+.||||+|+..+
T Consensus 25 ~t~L~~A~~~g~~~~v~-~Ll~~g~~i~~~d~--~g~tpLh~A~~~~ 68 (110)
T 2zgd_A 25 GKKLLEAARAGQDDEVR-ILMANGADVAAKDK--NGSTPLHLAARNG 68 (110)
T ss_dssp HHHHHHHHHHTCHHHHH-HHHHTTCCTTCCCT--TCCCHHHHHHHTT
T ss_pred chHHHHHHHcCCHHHHH-HHHHcCCCCCccCC--CCCCHHHHHHHcC
Confidence 45577777777776654 34466777776543 4678888877665
No 128
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=87.58 E-value=0.52 Score=43.73 Aligned_cols=41 Identities=22% Similarity=0.230 Sum_probs=21.8
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++.+.+ ++|+..|||||.... .+.||||+|+..+
T Consensus 74 Lh~A~~~g~~~~v-~~Ll~~gadvn~~d~--~G~TpLh~A~~~g 114 (169)
T 4gpm_A 74 LHHAAENGHKEVV-KLLISKGADVNAKDS--DGRTPLHHAAENG 114 (169)
T ss_dssp HHHHHHTTCHHHH-HHHHHTTCCTTCCCT--TSCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHH-HHHHHCcCCCCCCCC--CCCCHHHHHHHcC
Confidence 4455555555433 344455666665433 3456666665554
No 129
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=87.40 E-value=0.95 Score=44.67 Aligned_cols=43 Identities=14% Similarity=0.115 Sum_probs=26.8
Q ss_pred HHHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 543 QQLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 543 ~~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
..|+.|+..+++..+-.+| ..|+|||.... .+.||||+|+..+
T Consensus 42 t~l~~A~~~g~~~~v~~Ll-~~g~~~~~~~~--~g~t~L~~A~~~g 84 (299)
T 1s70_B 42 AVFLAACSSGDTEEVLRLL-ERGADINYANV--DGLTALHQACIDD 84 (299)
T ss_dssp HHHHHHHHHTCHHHHHHHH-HHCCCTTCBCT--TCCBHHHHHHHTT
T ss_pred cHHHHHHHcCCHHHHHHHH-HcCCCCcccCC--CCCCHHHHHHHcC
Confidence 3566777777777665443 56777776543 3567777776655
No 130
>1i4d_A Arfaptin 2, partner of RAC1; coiled coil, G-protein, complex, signaling protein; HET: GDP; 2.50A {Homo sapiens} SCOP: a.238.1.2 PDB: 1i49_A* 1i4l_A* 1i4t_A*
Probab=87.23 E-value=3.6 Score=40.48 Aligned_cols=89 Identities=13% Similarity=0.054 Sum_probs=66.1
Q ss_pred hhhhhHhHHHHHHHHHHhcccCCC---Cc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 006831 8 VAFNGDGNFVLQAREKFLSLRKST---RM-DVAVVIEEDLHNARTSFEQARFNLVGALSNVEAKKRFELLEAVGGTMDAH 83 (629)
Q Consensus 8 ~~Fe~~q~kyd~~~~ky~slsk~k---~~-~~~~E~a~eL~~aRk~f~~asldyv~~l~~vq~kk~~e~le~l~~~~~a~ 83 (629)
++|+.+--.||+++-..-.++-.- ++ ..+..+-.+...+|..|.+-+.|.+.+|..+..++--.+-..+..|..+.
T Consensus 109 k~ye~aR~EY~ay~~~~ee~~~~~~~~~~l~rve~~q~~~~~ak~kf~kLR~DV~~KleLLd~~r~kv~~~qL~~~~~al 188 (224)
T 1i4d_A 109 KQYEAARLEYDAYRTDLEELSLGPRDAGTRGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLLFHNAV 188 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHhHHHHHhhHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 567888888888887655544221 11 12346777899999999999999999999999888767777888888888
Q ss_pred HHHHhhhhHhhhh
Q 006831 84 LRFFKQGYELLHQ 96 (629)
Q Consensus 84 ~~ff~~g~e~~~~ 96 (629)
..||...++.++.
T Consensus 189 ~~y~~~~~~~l~~ 201 (224)
T 1i4d_A 189 SAYFAGNQKQLEQ 201 (224)
T ss_dssp HHHHHHHHHHHCC
T ss_pred HHHHHHhHHHHHH
Confidence 8888887776643
No 131
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=87.04 E-value=0.7 Score=37.48 Aligned_cols=43 Identities=21% Similarity=0.186 Sum_probs=33.8
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
.|+.|+..++++.+ ++|+..|+|+|.... .+.||||+|+..+.
T Consensus 38 ~L~~A~~~~~~~~v-~~Ll~~ga~~~~~d~--~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 38 PLHLAARNGHLEVV-KLLLEAGADVNAKDK--NGRTPLHLAARNGH 80 (93)
T ss_dssp HHHHHHHTTCHHHH-HHHHHTTCCTTCCCT--TSCCHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCCCccCC--CCCCHHHHHHHcCC
Confidence 36788888888765 566688999998654 47899999998773
No 132
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=86.86 E-value=0.79 Score=39.13 Aligned_cols=43 Identities=12% Similarity=-0.011 Sum_probs=29.4
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
-|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+.
T Consensus 43 ~L~~A~~~~~~~~v-~~Ll~~g~~~~~~d~--~g~tpL~~A~~~~~ 85 (123)
T 3aaa_C 43 PLHYAADCGQLEIL-EFLLLKGADINAPDK--HHITPLLSAVYEGH 85 (123)
T ss_dssp HHHHHHHTTCHHHH-HHHHTTTCCTTCCCT--TSCCHHHHHHHHTC
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCCCcCCC--CCCCHHHHHHHcCC
Confidence 46677777776654 455577888877543 35788888887763
No 133
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=86.29 E-value=0.7 Score=40.32 Aligned_cols=43 Identities=19% Similarity=0.172 Sum_probs=28.8
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
.|+.|+..++.+.+- +|+..|+|+|.... .+.||||+|+..+.
T Consensus 50 ~L~~A~~~~~~~~v~-~Ll~~g~~~~~~d~--~g~t~L~~A~~~~~ 92 (136)
T 2jab_A 50 PLYLATAHGHLEIVE-VLLKNGADVNAVDA--IGFTPLHLAAFIGH 92 (136)
T ss_dssp HHHHHHHHTCHHHHH-HHHHTTCCTTCCCT--TCCCHHHHHHHHTC
T ss_pred HHHHHHHcCCHHHHH-HHHHcCCCCCcCCC--CCCCHHHHHHHcCC
Confidence 466777777766543 55567888876543 45788888877763
No 134
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=85.93 E-value=0.8 Score=39.10 Aligned_cols=40 Identities=8% Similarity=0.040 Sum_probs=29.5
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATV 586 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~ 586 (629)
-|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+.
T Consensus 76 pL~~A~~~~~~~~v-~~Ll~~ga~~~~~~~--~g~t~l~~A~~ 115 (123)
T 3aaa_C 76 PLLSAVYEGHVSCV-KLLLSKGADKTVKGP--DGLTAFEATDN 115 (123)
T ss_dssp HHHHHHHHTCHHHH-HHHHHTTCCTTCCCT--TSCCHHHHCCC
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCCCCcCC--CCCCHHHHhCC
Confidence 46788888887655 455678999887643 46899999854
No 135
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=84.18 E-value=1.1 Score=37.72 Aligned_cols=43 Identities=12% Similarity=0.037 Sum_probs=34.1
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
.|+.|+..++++.+- +|+..|+|+|.... .+.||||+|+..+.
T Consensus 60 pLh~A~~~~~~~~v~-~Ll~~ga~~~~~d~--~g~tpl~~A~~~~~ 102 (110)
T 2zgd_A 60 PLHLAARNGHLEVVK-LLLEAGADVXAQDK--FGKTAFDISIDNGN 102 (110)
T ss_dssp HHHHHHHTTCHHHHH-HHHHTTCCTTCCCT--TSCCHHHHHHHHTC
T ss_pred HHHHHHHcCCHHHHH-HHHHcCCCcccccc--CCCcHHHHHHHcCC
Confidence 477899999887654 66688999998754 47899999998773
No 136
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=83.99 E-value=0.99 Score=37.91 Aligned_cols=41 Identities=20% Similarity=0.240 Sum_probs=22.0
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++++.+- .|+..|+|+|.... .+.||||.|+..+
T Consensus 13 L~~A~~~~~~~~~~-~Ll~~g~~~~~~d~--~g~t~L~~A~~~~ 53 (115)
T 2l6b_A 13 LHNAAKNGHAEEVK-KLLSKGADVNARSK--DGNTPLHLAAKNG 53 (115)
T ss_dssp HHHHHHHTCHHHHH-HHTTTTCCSSCCCS--SSCCTTHHHHTTT
T ss_pred HHHHHHcCCHHHHH-HHHHcCCCCCCcCC--CCCCHHHHHHHcC
Confidence 45566666655433 34455666665432 3456666665544
No 137
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=83.98 E-value=0.4 Score=47.84 Aligned_cols=41 Identities=15% Similarity=0.088 Sum_probs=20.7
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++...+ ++|+..|+|++.... .+.||||.|+..+
T Consensus 90 Lh~A~~~g~~~~v-~~Ll~~~a~~~~~~~--~g~t~l~~a~~~~ 130 (269)
T 4b93_B 90 LHVAALHGRADLI-PLLLKHGANAGARNA--DQAVPLHLACQQG 130 (269)
T ss_dssp HHHHHHTTCTTHH-HHHHHTTCCTTCCCT--TCCCHHHHHHHHT
T ss_pred HHHHHHcCcHHHH-HHHHhcCCCcCccCC--CCCCccccccccC
Confidence 4555555554433 334455666555432 2456666665555
No 138
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=82.97 E-value=1.2 Score=38.78 Aligned_cols=42 Identities=10% Similarity=-0.047 Sum_probs=31.0
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 83 ~L~~A~~~~~~~~v-~~Ll~~g~~~~~~~~--~g~tpl~~A~~~~ 124 (136)
T 2jab_A 83 PLHLAAFIGHLEIA-EVLLKHGADVNAQDK--FGKTAFDISIGNG 124 (136)
T ss_dssp HHHHHHHHTCHHHH-HHHHHTTCCTTCCCT--TSCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCCcCcCC--CCCCHHHHHHHCC
Confidence 47778888887654 455678998887643 4689999998776
No 139
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=82.89 E-value=1.2 Score=40.39 Aligned_cols=42 Identities=19% Similarity=0.171 Sum_probs=27.9
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|+.|+..++++.+- .|+..|+|+|.... .+.||||+|+..+
T Consensus 50 ~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~--~g~t~L~~A~~~~ 91 (169)
T 2y1l_E 50 PLHLAAFNGHLEIVE-VLLKNGADVNAVDH--AGMTPLRLAALFG 91 (169)
T ss_dssp HHHHHHHTTCHHHHH-HHHHTTCCTTCCCT--TSCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHH-HHHHcCCCCCccCC--CCCCHHHHHHHcC
Confidence 466777777766544 44567777776543 3578888887776
No 140
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=82.43 E-value=1.2 Score=43.49 Aligned_cols=41 Identities=12% Similarity=0.021 Sum_probs=17.9
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++...+ ++|+..|+|+|.... .+.||||+|+.+.
T Consensus 115 L~~A~~~g~~~~v-~~Ll~~ga~~~~~d~--~g~t~l~~A~~~~ 155 (244)
T 3ui2_A 115 LHMAAGYVRPEVV-EALVELGADIEVEDE--RGLTALELAREIL 155 (244)
T ss_dssp HHHHHHTTCHHHH-HHHHHTTCCTTCCCT--TCCCHHHHHHHHH
T ss_pred HHHHHHcCCHHHH-HHHHHCCCCCCCCCC--CCCcHHHHHHHHH
Confidence 3444444444332 233344555554322 2345555555444
No 141
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=82.06 E-value=1 Score=39.26 Aligned_cols=40 Identities=5% Similarity=-0.026 Sum_probs=17.7
Q ss_pred HHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 546 WESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 546 ~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
+.|+. ++.+.+ ++|+..|+|+|..... .+.||||+|+..+
T Consensus 50 ~~A~~-~~~~~v-~~Ll~~g~~~~~~~~~-~g~t~L~~A~~~~ 89 (136)
T 1d9s_A 50 QVMMM-GSAQVA-ELLLLHGAEPNCADPA-TLTRPVHDAAREG 89 (136)
T ss_dssp TTSTT-SCHHHH-HHHHHHTCCSSCCBTT-TTBCHHHHHHHHT
T ss_pred HHHHc-CCHHHH-HHHHHCCCCCCCcCCC-CCCCHHHHHHHcC
Confidence 34444 444332 3333445555543221 1345555555554
No 142
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=81.95 E-value=1.4 Score=38.20 Aligned_cols=42 Identities=19% Similarity=0.067 Sum_probs=30.5
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|+.|+..++.+.+- +|+..|+|+|.... .+.||||+|+..+
T Consensus 46 ~L~~A~~~~~~~~~~-~Ll~~g~~~~~~~~--~g~t~L~~A~~~~ 87 (137)
T 3c5r_A 46 PLHEACNHGHLKVVE-LLLQHKALVNTTGY--QNDSPLHDAAKNG 87 (137)
T ss_dssp HHHHHHHTTCHHHHH-HHHHTTCCTTCCCG--GGCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHH-HHHHcCCcccCcCC--CCCCHHHHHHHcC
Confidence 467788888776554 55577888887543 3578999988777
No 143
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=81.93 E-value=1.2 Score=42.08 Aligned_cols=42 Identities=17% Similarity=0.187 Sum_probs=17.4
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..+++..+-.+|-..|+|+|.... .+.||||+|+..+
T Consensus 7 L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~--~g~t~L~~A~~~g 48 (232)
T 2rfa_A 7 LLLAAKENDVQALSKLLKFEGCEVHQRGA--MGETALHIAALYD 48 (232)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCSCTTCCCT--TSCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHhcCCCcccCCC--CCCCHHHHHHHcC
Confidence 34444444444443333212444444322 2344555444433
No 144
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=81.69 E-value=1.5 Score=38.89 Aligned_cols=42 Identities=10% Similarity=-0.037 Sum_probs=28.3
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|+.|+..++.+.+- .|+..|+|+|.... .+.||||+|+..+
T Consensus 37 ~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~--~g~t~L~~A~~~~ 78 (153)
T 1awc_B 37 PLHLAAQYGHFSTTE-VLLRAGVSRDARTK--VDRTPLHMAASEG 78 (153)
T ss_dssp HHHHHHHHTCHHHHH-HHHTTTCCTTCCCT--TCCCHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHH-HHHHcCCCCCCCCC--CCCCHHHHHHHcC
Confidence 466677777766544 44567888776543 3578888887766
No 145
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=81.44 E-value=0.97 Score=46.11 Aligned_cols=41 Identities=10% Similarity=-0.038 Sum_probs=32.0
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVM 587 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~ 587 (629)
.|+.|+..++.+.+ ++|+..|||+|.... .+.||||+|+..
T Consensus 286 pLh~A~~~g~~~~v-~~Ll~~Gad~~~~d~--~G~TpL~~A~~~ 326 (327)
T 1sw6_A 286 CLNIAARLGNISIV-DALLDYGADPFIANK--SGLRPVDFGAGL 326 (327)
T ss_dssp HHHHHHHHCCHHHH-HHHHHTTCCTTCCCT--TSCCGGGGTCC-
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCCcccCC--CCCCHHHHHHhc
Confidence 47789999998655 566688999998754 478999999764
No 146
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=81.37 E-value=1.3 Score=40.72 Aligned_cols=43 Identities=16% Similarity=0.088 Sum_probs=31.2
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
-|+.|+..++++.+- +|+..|+|+|.... .+.||||+|+..+.
T Consensus 42 ~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~--~g~t~l~~A~~~~~ 84 (201)
T 3hra_A 42 PLNIAVHNNDIEIAK-ALIDRGADINLQNS--ISDSPYLYAGAQGR 84 (201)
T ss_dssp HHHHHHHHTCHHHHH-HHHHTTCCTTCCCT--TSCCHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHH-HHHHcCCCCCCCCC--CCCCHHHHHHHcCC
Confidence 477788888876554 55577888887544 35788888888773
No 147
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=81.19 E-value=1.6 Score=38.58 Aligned_cols=41 Identities=15% Similarity=0.184 Sum_probs=31.1
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 72 L~~A~~~~~~~~v-~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~ 112 (156)
T 1bd8_A 72 VHDAARTGFLDTL-KVLVEHGADVNVPDG--TGALPIHLAVQEG 112 (156)
T ss_dssp HHHHHHTTCHHHH-HHHHHTTCCSCCCCT--TSCCHHHHHHHHT
T ss_pred HHHHHHcCcHHHH-HHHHHcCCCCCCcCC--CCCcHHHHHHHhC
Confidence 6778888887755 456678999988654 4689999998776
No 148
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=81.16 E-value=1.3 Score=37.06 Aligned_cols=41 Identities=17% Similarity=0.161 Sum_probs=32.6
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++++.+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 46 L~~A~~~~~~~~~-~~Ll~~g~~~~~~d~--~g~tpl~~A~~~~ 86 (115)
T 2l6b_A 46 LHLAAKNGHAEIV-KLLLAKGADVNARSK--DGNTPEHLAKKNG 86 (115)
T ss_dssp THHHHTTTCHHHH-HHHTTTTCCTTCCCT--TCCCTTHHHHTTT
T ss_pred HHHHHHcCcHHHH-HHHHHcCCCCcccCC--CCCCHHHHHHHCC
Confidence 6778888887754 566788999998654 4689999998876
No 149
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=80.69 E-value=1.6 Score=40.17 Aligned_cols=41 Identities=12% Similarity=0.021 Sum_probs=18.8
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+.++
T Consensus 114 L~~A~~~~~~~~v-~~Ll~~ga~~~~~d~--~g~tpl~~A~~~~ 154 (183)
T 3deo_A 114 LHMAAGYVRPEVV-EALVELGADIEVEDE--RGLTALELAREIL 154 (183)
T ss_dssp HHHHHHTTCHHHH-HHHHHHTCCTTCCCT--TSCCHHHHHHHHH
T ss_pred HHHHHhcCcHHHH-HHHHHcCCCCcCCCC--CCCCHHHHHHHhc
Confidence 4445555444432 233344555554322 2445555555554
No 150
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=80.64 E-value=1.2 Score=43.05 Aligned_cols=43 Identities=21% Similarity=0.082 Sum_probs=32.1
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
.|+.|+..++.+.+- +|+..|+|+|.... .+.||||+|+..+.
T Consensus 73 ~L~~A~~~g~~~~v~-~Ll~~ga~~~~~d~--~g~tpL~~A~~~~~ 115 (239)
T 1ycs_B 73 ALHNAVCAGHTEIVK-FLVQFGVNVNAADS--DGWTPLHCAASCNN 115 (239)
T ss_dssp HHHHHHHHTCHHHHH-HHHHHTCCTTCCCT--TCCCHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHH-HHHHcCCCCCccCC--CCCCHHHHHHHcCC
Confidence 477888888877554 55577999988654 46899999988773
No 151
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=80.56 E-value=1.6 Score=38.98 Aligned_cols=41 Identities=12% Similarity=-0.051 Sum_probs=28.8
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 79 L~~A~~~~~~~~v-~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~ 119 (165)
T 3twr_A 79 LHNACSYGHYEVA-ELLVKHGAVVNVADL--WKFTPLHEAAAKG 119 (165)
T ss_dssp HHHHHHTTCHHHH-HHHHHTTCCTTCCCT--TCCCHHHHHHHTT
T ss_pred HHHHHHcCcHHHH-HHHHhCCCCCCCcCC--CCCCHHHHHHHcC
Confidence 5667777777644 455677888887543 4578888887766
No 152
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=78.87 E-value=1.8 Score=40.91 Aligned_cols=43 Identities=14% Similarity=0.067 Sum_probs=29.6
Q ss_pred HHHHHHhcCCHHHHHHHHHhC-CCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICS-EPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~-gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
.|+.|+..+++..+- +|+.. |+|+|.... .+.||||+|+..+.
T Consensus 109 ~L~~A~~~~~~~~v~-~Ll~~~g~~~~~~d~--~g~tpL~~A~~~~~ 152 (222)
T 3ehr_A 109 ALYWACHGGHKDIVE-MLFTQPNIELNQQNK--LGDTALHAAAWKGY 152 (222)
T ss_dssp HHHHHHHTTCHHHHH-HHTTSTTCCCCCCCT--TSCCHHHHHHHHTC
T ss_pred HHHHHHHcCCHHHHH-HHHcCCCCCccccCC--CCCCHHHHHHHcCC
Confidence 467777777766544 55555 888887543 45788888887773
No 153
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=78.79 E-value=1.4 Score=44.02 Aligned_cols=43 Identities=16% Similarity=-0.011 Sum_probs=31.5
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
-|+.|+..+++..+- +|+..|+|+|.... .+.||||+|+..+.
T Consensus 61 ~L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~--~g~t~L~~A~~~g~ 103 (351)
T 3utm_A 61 PLHLAAGYNRVRIVQ-LLLQHGADVHAKDK--GGLVPLHNACSYGH 103 (351)
T ss_dssp HHHHHHHTTCHHHHH-HHHHTTCCTTCCCT--TCCCHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHH-HHHHcCCCCCccCC--CCCcHHHHHHHCCC
Confidence 577788888877554 55577888887643 46788988888773
No 154
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=78.78 E-value=1.7 Score=38.73 Aligned_cols=43 Identities=7% Similarity=0.026 Sum_probs=33.5
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
-|+.|+..++++.+- +|+..|+|+|.... .+.||||+|+..+.
T Consensus 81 pL~~A~~~~~~~~v~-~Ll~~ga~~~~~d~--~g~tpl~~A~~~~~ 123 (156)
T 1bi7_B 81 PVHDAAREGFLDTLV-VLHRAGARLDVRDA--WGRLPVDLAEELGH 123 (156)
T ss_dssp HHHHHHHHTCHHHHH-HHHHHTCCSSCCCT--TCCCHHHHHHHHTC
T ss_pred HHHHHHHCCCHHHHH-HHHHcCCCCcccCC--CCCCHHHHHHHhCH
Confidence 367788888887654 66678999998654 47899999998773
No 155
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=78.72 E-value=1.5 Score=42.38 Aligned_cols=44 Identities=18% Similarity=0.089 Sum_probs=34.4
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCC------------CCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQ------------ASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~------------~~~~t~l~la~~~~ 588 (629)
.|+.|+..++++.+ ++|+..|+|+|..... ..+.||||+|+..+
T Consensus 96 ~L~~A~~~g~~~~v-~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g 151 (260)
T 3jxi_A 96 ALHIAIERRCKHYV-ELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTN 151 (260)
T ss_dssp HHHHHHHTTCHHHH-HHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTT
T ss_pred HHHHHHHcCCHHHH-HHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcC
Confidence 37789999998755 5666889999987521 35789999999877
No 156
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=78.44 E-value=2.1 Score=37.98 Aligned_cols=41 Identities=15% Similarity=0.106 Sum_probs=26.6
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++.+.+- +|+..|+|+|.... .+.||||+|+..+
T Consensus 74 L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~--~g~t~L~~A~~~~ 114 (162)
T 1ihb_A 74 IHDAARAGFLDTLQ-TLLEFQADVNIEDN--EGNLPLHLAAKEG 114 (162)
T ss_dssp HHHHHHHTCHHHHH-HHHHTTCCTTCCCT--TSCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHHH-HHHHcCCCCCCcCC--CCCCHHHHHHHcC
Confidence 56677777766544 44567777776543 3577888877665
No 157
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=78.36 E-value=1.7 Score=43.94 Aligned_cols=42 Identities=19% Similarity=0.120 Sum_probs=26.5
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++...+..++...|+|||.... .+.||||+|+..+
T Consensus 243 L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~--~G~TpL~~A~~~g 284 (337)
T 4g8k_A 243 LILAVEKKHLGLVQRLLEQEHIEINDTDS--DGKTALLLAVELK 284 (337)
T ss_dssp HHHHHHTTCHHHHHHHHTSTTCCTTCBCT--TSCBHHHHHHHTT
T ss_pred HHHHHHhhhhHHHHHHHHhcCCcccCcCC--CCCCHHHHHHHcC
Confidence 55667777766665554445777776543 3567777777665
No 158
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=78.34 E-value=2 Score=39.10 Aligned_cols=43 Identities=19% Similarity=0.215 Sum_probs=33.5
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
-|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+.
T Consensus 42 ~L~~A~~~~~~~~v-~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~ 84 (179)
T 3f6q_A 42 PLHWACREGRSAVV-EMLIMRGARINVMNR--GDDTPLHLAASHGH 84 (179)
T ss_dssp HHHHHHHTTCHHHH-HHHHHTTCCTTCCCT--TCCCHHHHHHHTTC
T ss_pred HHHHHHHcCcHHHH-HHHHHcCCCCCCcCC--CCCCHHHHHHHcCC
Confidence 47788888888665 456688999998644 46899999998873
No 159
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=78.06 E-value=1.6 Score=43.43 Aligned_cols=40 Identities=15% Similarity=0.155 Sum_probs=31.4
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATV 586 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~ 586 (629)
-|+.|+..++++.+ ++|+..|||||.... .+.||||+|+.
T Consensus 188 ~Lh~A~~~g~~~~v-~~Ll~~Gad~~~~d~--~G~TpL~~A~~ 227 (269)
T 4b93_B 188 ALHEAVIEKHVFVV-ELLLLHGASVQVLNK--RQRTAVDCAEQ 227 (269)
T ss_dssp HHHHHHHTTCHHHH-HHHHHTTCCSCCCCT--TSCCSGGGSCT
T ss_pred HHHHHHHcCCHHHH-HHHHHCCCCCCCcCC--CCCCHHHHHHh
Confidence 36788999988755 566688999998754 47899999964
No 160
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=77.85 E-value=2 Score=42.61 Aligned_cols=42 Identities=19% Similarity=0.178 Sum_probs=30.4
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|..|+..++.+.+ ++|+..|+|||.... .+.||||+|+..+
T Consensus 186 pLh~A~~~g~~~~v-~~Ll~~gad~n~~d~--~G~TpLh~A~~~g 227 (276)
T 4hbd_A 186 ALMLAVSHGRVDVV-KALLACEADVNVQDD--DGSTALMCACEHG 227 (276)
T ss_dssp HHHHHHHTTCHHHH-HHHHHTTCCTTCCCT--TSCCHHHHHHHHT
T ss_pred HHHHHHHcCCHHHH-HHHHhCCCCCCCCCC--CCCCHHHHHHHCC
Confidence 36678888876654 455677888887644 4678888888777
No 161
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=77.73 E-value=1.9 Score=37.38 Aligned_cols=43 Identities=9% Similarity=0.088 Sum_probs=33.4
Q ss_pred HHHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 543 QQLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 543 ~~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
-.|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 78 t~L~~A~~~~~~~~v-~~Ll~~ga~~~~~~~--~g~tpl~~A~~~~ 120 (137)
T 3c5r_A 78 SPLHDAAKNGHVDIV-KLLLSYGASRNAVNI--FGLRPVDYTDDES 120 (137)
T ss_dssp CHHHHHHHTTCHHHH-HHHHHTTCCTTCCCT--TSCCGGGGCCCHH
T ss_pred CHHHHHHHcCCHHHH-HHHHHcCCCCCCCCC--CCCCHHHHHhhcc
Confidence 357888988888755 466688999998754 4689999998766
No 162
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=77.69 E-value=1.9 Score=38.57 Aligned_cols=43 Identities=12% Similarity=0.037 Sum_probs=32.3
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
.|+.|+..++++.+- +|+..|+|+|.... .+.||||+|+..+.
T Consensus 39 ~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 39 PLMWAAAHGQIAVVE-FLLQNGADPQLLGK--GRESALSLACSKGY 81 (167)
T ss_dssp HHHHHHHTTCHHHHH-HHHHTTCCTTCCCT--TCCCHHHHHHHHTC
T ss_pred HHHHHHHCCCHHHHH-HHHHcCCCCCCcCC--CCCcHHHHHHHcCC
Confidence 477888888876554 55677999987643 46799999988873
No 163
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=77.65 E-value=2.7 Score=40.53 Aligned_cols=42 Identities=19% Similarity=0.119 Sum_probs=29.9
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
-|+.|+..++.+.+- +|+..|+|+|.... .+.||||+|+..+
T Consensus 57 pLh~A~~~g~~~~v~-~Ll~~ga~~n~~d~--~g~tpLh~A~~~g 98 (229)
T 2vge_A 57 ALHNAICGANYSIVD-FLITAGANVNSPDS--HGWTPLHCAASCN 98 (229)
T ss_dssp HHHHHHHTTCHHHHH-HHHHTTCCTTCCCT--TCCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHH-HHHHCCCCCCCCCC--CCCCHHHHHHHcC
Confidence 466777777776544 55577888887644 4678888888777
No 164
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=77.40 E-value=2.4 Score=36.77 Aligned_cols=43 Identities=7% Similarity=-0.001 Sum_probs=33.6
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
-|+.|+..++++.+ ++|+..|+|+|.... .+.||||+|+..+.
T Consensus 81 ~L~~A~~~~~~~~v-~~Ll~~ga~~~~~d~--~g~tpl~~A~~~~~ 123 (136)
T 1d9s_A 81 PVHDAAREGFLDTL-VVLHRAGARLDVCDA--WGRLPVDLAEEQGH 123 (136)
T ss_dssp HHHHHHHHTCHHHH-HHHHHTCCCCCCCSS--SSSCHHHHHHHHTC
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCCCccCC--CCCCHHHHHHHcCC
Confidence 36778888887755 466688999998754 47899999998763
No 165
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=76.89 E-value=2.5 Score=38.87 Aligned_cols=43 Identities=12% Similarity=0.084 Sum_probs=32.7
Q ss_pred HHHHHhcCC----HHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 545 LWESVRDND----KKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 545 l~~av~~~d----~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
|+.|+..++ ...++++|+..|+|+|.... .+.||||+|+..+.
T Consensus 144 L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~--~g~t~l~~A~~~~~ 190 (201)
T 3hra_A 144 LIEAVGLREGNQLYQDIVKLLMENGADQSIKDN--SGRTAMDYANQKGY 190 (201)
T ss_dssp HHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCT--TSCCHHHHHHHHTC
T ss_pred HHHHHHhccchhhHHHHHHHHHHCCCCCCccCC--CCCCHHHHHHHcCC
Confidence 667777776 25566777889999998654 46899999988773
No 166
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=76.88 E-value=1.9 Score=41.60 Aligned_cols=43 Identities=16% Similarity=0.083 Sum_probs=31.7
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|+.|+..++.+.+ ++|+..|+|+|..... .+.||||+|.++.
T Consensus 106 pL~~A~~~~~~~~v-~~Ll~~ga~~~~~~~~-~~~t~l~~a~~~~ 148 (239)
T 1ycs_B 106 PLHCAASCNNVQVC-KFLVESGAAVFAMTYS-DMQTAADKCEEME 148 (239)
T ss_dssp HHHHHHHTTCHHHH-HHHHHTTCCTTCCCSS-SCCCHHHHCCSSS
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCcceecCC-CCcchHHHHHHhh
Confidence 47788888887755 5667889999987543 2359999995443
No 167
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=76.75 E-value=2.2 Score=42.65 Aligned_cols=42 Identities=10% Similarity=0.184 Sum_probs=33.4
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
-|+.|+..++.+.+ ++|+..|||+|.... .+.||||+|+..+
T Consensus 208 pLh~A~~~g~~~~v-~~Ll~~gad~~~~d~--~g~tpL~~A~~~~ 249 (278)
T 1dcq_A 208 ALHYCCLTDNAECL-KLLLRGKASIEIANE--SGETPLDIAKRLK 249 (278)
T ss_dssp HHHHHHHTTCHHHH-HHHHHTTCCTTCCCT--TSCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCCCCccC--CCCCHHHHHHHcC
Confidence 36788998888755 566689999998754 4789999998776
No 168
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=76.29 E-value=2.4 Score=40.94 Aligned_cols=44 Identities=9% Similarity=-0.045 Sum_probs=33.1
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHH--hhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLA--TVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la--~~~~~ 589 (629)
-|+.|+..++.+.+- +|+..|+|+|.... ..+.||||+| +..+.
T Consensus 90 pLh~A~~~g~~~~v~-~Ll~~ga~~~~~~~-~~g~tpL~~A~a~~~~~ 135 (229)
T 2vge_A 90 PLHCAASCNDTVICM-ALVQHGAAIFATTL-SDGATAFEKCDPYREGY 135 (229)
T ss_dssp HHHHHHHTTCHHHHH-HHHTTTCCTTCCCS-STTCCTGGGCCTTSTTH
T ss_pred HHHHHHHcCCHHHHH-HHHHcCCCcccccC-CCCCCHHHHHHHHhcCh
Confidence 477889988877654 66688999998643 2478999999 55553
No 169
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=76.17 E-value=2 Score=39.48 Aligned_cols=44 Identities=14% Similarity=-0.021 Sum_probs=32.8
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
.|+.|+..++.+.+ ++|+..|+|+|.... ..+.||||+|+..+.
T Consensus 79 ~L~~A~~~~~~~~v-~~Ll~~ga~~~~~~~-~~g~tpL~~A~~~~~ 122 (183)
T 3deo_A 79 ALLFVAGLGSDKCV-RLLAEAGADLDHRDM-RGGLTALHMAAGYVR 122 (183)
T ss_dssp HHHHHHHHTCHHHH-HHHHHTTCCTTCCCS-SSSCCHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCCCcCCC-CCCCCHHHHHHhcCc
Confidence 47778888888654 566688999987642 246899999988774
No 170
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=76.16 E-value=2.4 Score=40.91 Aligned_cols=42 Identities=10% Similarity=0.025 Sum_probs=33.0
Q ss_pred HHHHHHhcCCHHHHHHHHHh---CCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIIC---SEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~---~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
-|+.|+..++.+.+ ++|+. .|+|+|.... .+.||||+|+..+
T Consensus 139 pL~~A~~~~~~~~v-~~Ll~~~~~ga~~n~~d~--~g~TpLh~A~~~~ 183 (256)
T 2etb_A 139 PLSLAACTKQWDVV-TYLLENPHQPASLEATDS--LGNTVLHALVMIA 183 (256)
T ss_dssp HHHHHHHTTCHHHH-HHHHHCSSCCCCTTCCCT--TSCCHHHHHHHHC
T ss_pred HHHHHHHcCCHHHH-HHHHhccccCCCcCccCC--CCCCHHHHHHHcc
Confidence 37789999888765 46667 8999998754 4789999999844
No 171
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=76.04 E-value=1.7 Score=40.76 Aligned_cols=30 Identities=7% Similarity=0.079 Sum_probs=23.5
Q ss_pred HHHHHHHHhCCCCccccCCCCCCC-CcchHHhh
Q 006831 555 KAVYRQIICSEPNVNAIHGQASYG-KRLPLATV 586 (629)
Q Consensus 555 ~~~~~~l~~~gadvn~~~~~~~~~-t~l~la~~ 586 (629)
..++++|+..|||||.... .+. ||||+|+.
T Consensus 94 ~~iv~~Ll~~Gadin~~d~--~g~ttpLh~A~~ 124 (186)
T 3t8k_A 94 TELCKIFLEKGADITALYK--PYKIVVFKNIFN 124 (186)
T ss_dssp HHHHHHHHHTTCCSSSCBG--GGTBCTTGGGGG
T ss_pred HHHHHHHHHCCCCCCccCC--CcCchHHHHHHH
Confidence 3567778888999998754 467 99999987
No 172
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=76.00 E-value=2.4 Score=41.33 Aligned_cols=43 Identities=19% Similarity=0.153 Sum_probs=29.1
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
-|+.|+..++.+.+- +|+..|+|+|.... .+.||||+|+..+.
T Consensus 39 ~L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~ 81 (261)
T 2xai_A 39 PLHEACLGGHLSCVK-ILLKHGAQVNGVTA--DWHTPLFNACVSGS 81 (261)
T ss_dssp HHHHHHHHTCHHHHH-HHHHTTCCTTCCCT--TSCCHHHHHHHHTC
T ss_pred HHHHHHHcCCHHHHH-HHHHCCCCCCCCCC--CCCCHHHHHHHcCC
Confidence 466777777776544 45567888877543 35788888877773
No 173
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=75.98 E-value=2.2 Score=43.43 Aligned_cols=42 Identities=12% Similarity=-0.121 Sum_probs=33.4
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
-|+.|+..++++.+ ++|+..|||||.... .+.||||+|+..+
T Consensus 134 pLh~Aa~~g~~~~v-~~Ll~~Gad~n~~d~--~g~TpLh~A~~~g 175 (327)
T 1sw6_A 134 PLHWLTSIANLELV-KHLVKHGSNRLYGDN--MGESCLVKAVKSV 175 (327)
T ss_dssp HHHHHHHTTCHHHH-HHHHHTTCCTTBCCT--TCCCHHHHHHHSS
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCCCCcCC--CCCCHHHHHHHhc
Confidence 47889999998765 466688999997654 4789999999854
No 174
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=75.98 E-value=2.6 Score=38.24 Aligned_cols=43 Identities=14% Similarity=0.193 Sum_probs=34.4
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
.|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+.
T Consensus 75 ~L~~A~~~~~~~~v-~~Ll~~g~~~~~~d~--~g~t~L~~A~~~~~ 117 (179)
T 3f6q_A 75 PLHLAASHGHRDIV-QKLLQYKADINAVNE--HGNVPLHYACFWGQ 117 (179)
T ss_dssp HHHHHHHTTCHHHH-HHHHHTTCCTTCCCT--TSCCHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCCCccCC--CCCCHHHHHHHcCC
Confidence 57789999887755 566688999998754 57899999998884
No 175
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=75.94 E-value=2.2 Score=40.27 Aligned_cols=43 Identities=14% Similarity=0.050 Sum_probs=33.9
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
.|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+.
T Consensus 124 ~L~~A~~~~~~~~v-~~Ll~~ga~~~~~d~--~g~t~L~~A~~~~~ 166 (232)
T 2rfa_A 124 PLSFAACVGSEEIV-RLLIEHGADIRAQDS--LGNTVLHILILQPN 166 (232)
T ss_dssp HHHHHHHHTCHHHH-HHHHHTTCCTTCCCT--TSCCHHHHHHTCSC
T ss_pred HHHHHHHcCCHHHH-HHHHHCCCCCCCCCC--CCCCHHHHHHHcCC
Confidence 47788999888765 466688999998754 47899999988763
No 176
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=75.93 E-value=2.3 Score=42.44 Aligned_cols=42 Identities=12% Similarity=0.083 Sum_probs=30.4
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 250 ~L~~A~~~g~~~~v-~~Ll~~ga~~n~~d~--~g~t~L~~A~~~~ 291 (351)
T 3utm_A 250 PLHVAAERAHNDVM-EVLHKHGAKMNALDS--LGQTALHRAALAG 291 (351)
T ss_dssp HHHHHHHTTCHHHH-HHHHHTTCCTTCCCT--TSCCHHHHHHHHT
T ss_pred HHHHHHHcCCHHHH-HHHHHCCCCCCCcCC--CCCCHHHHHHHcC
Confidence 36678888887644 456678888887654 4678888888766
No 177
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=75.64 E-value=1.6 Score=38.73 Aligned_cols=40 Identities=10% Similarity=-0.051 Sum_probs=22.0
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+. ++.+.+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 42 L~~A~~-~~~~~v-~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 42 LQVMKL-GNPEIA-RRLLLRGANPDLKDR--TGFAVIHDAARAG 81 (162)
T ss_dssp HHHCCS-SCHHHH-HHHHHTTCCTTCCCT--TSCCHHHHHHHHT
T ss_pred HHHHHc-CcHHHH-HHHHHcCCCCCCCCC--CCCCHHHHHHHcC
Confidence 344555 555433 344456777665433 3467777776655
No 178
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=75.58 E-value=2.6 Score=40.57 Aligned_cols=42 Identities=12% Similarity=0.075 Sum_probs=23.7
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|+.|+..++.+.+- +|+..|+|+|.... .+.||||+|+..+
T Consensus 42 ~L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~--~g~t~L~~A~~~~ 83 (285)
T 1wdy_A 42 PLHNAVQMSREDIVE-LLLRHGADPVLRKK--NGATPFLLAAIAG 83 (285)
T ss_dssp HHHHHHHTTCHHHHH-HHHHTTCCTTCCCT--TCCCHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHH-HHHHcCCCCcccCC--CCCCHHHHHHHcC
Confidence 355666666655433 44456666665432 3466666666655
No 179
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=75.04 E-value=3 Score=37.16 Aligned_cols=42 Identities=17% Similarity=-0.008 Sum_probs=33.4
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 45 ~L~~A~~~~~~~~v-~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~ 86 (165)
T 3twr_A 45 PLHFAAGYNRVSVV-EYLLQHGADVHAKDK--GGLVPLHNACSYG 86 (165)
T ss_dssp HHHHHHHTTCHHHH-HHHHHTTCCTTCCCT--TSCCHHHHHHHTT
T ss_pred HHHHHHHcChHHHH-HHHHhcCCCCCccCC--CCCCHHHHHHHcC
Confidence 47788999887755 466688999998754 4689999999877
No 180
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=74.92 E-value=2.9 Score=36.85 Aligned_cols=43 Identities=19% Similarity=0.091 Sum_probs=34.2
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
.|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+.
T Consensus 70 ~L~~A~~~~~~~~v-~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~ 112 (153)
T 1awc_B 70 PLHMAASEGHANIV-EVLLKHGADVNAKDM--LKMTALHWATEHNH 112 (153)
T ss_dssp HHHHHHHHTCHHHH-HHHHTTTCCTTCCCT--TSCCHHHHHHHTTC
T ss_pred HHHHHHHcChHHHH-HHHHHcCCCCCCCCC--CCCCHHHHHHHcCC
Confidence 47889998888755 566688999998654 47899999998873
No 181
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=74.37 E-value=3.1 Score=37.40 Aligned_cols=43 Identities=19% Similarity=0.075 Sum_probs=34.0
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
.|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+.
T Consensus 83 ~L~~A~~~~~~~~~-~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~ 125 (169)
T 2y1l_E 83 PLRLAALFGHLEIV-EVLLKNGADVNANDM--EGHTPLHLAAMFGH 125 (169)
T ss_dssp HHHHHHHTTCHHHH-HHHHHTTCCTTCCCT--TSCCHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCCCCCCC--CCCCHHHHHHHcCC
Confidence 57788998887755 566688999998654 46899999998873
No 182
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=74.24 E-value=2.8 Score=40.37 Aligned_cols=42 Identities=10% Similarity=0.036 Sum_probs=32.5
Q ss_pred HHHHHHhcCCHHHHHHHHHh---CCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIIC---SEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~---~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|+.|+..++.+.+ ++|+. .|+|+|.... .+.||||+|+..+
T Consensus 143 pL~~A~~~g~~~~v-~~Ll~~~~~ga~~~~~d~--~g~TpLh~A~~~~ 187 (260)
T 3jxi_A 143 PLSLAACTNQPHIV-HYLTENGHKQADLRRQDS--RGNTVLHALVAIA 187 (260)
T ss_dssp HHHHHHHTTCHHHH-HHHHHCSSCCCCTTCCCT--TSCCHHHHHHHHC
T ss_pred HHHHHHHcCCHHHH-HHHHhccccCCCCcccCC--CCCcHHHHHHHhc
Confidence 37788999887755 46667 8999998654 4789999999644
No 183
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=73.82 E-value=2.8 Score=37.62 Aligned_cols=42 Identities=14% Similarity=0.045 Sum_probs=27.2
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 72 ~L~~A~~~~~~~~v-~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~ 113 (172)
T 3v30_A 72 ALSLASTGGYTDIV-GLLLERDVDINIYDW--NGGTPLLYAVRGN 113 (172)
T ss_dssp HHHHHHHTTCHHHH-HHHHTTTCCTTCCCT--TSCCHHHHHHHTT
T ss_pred HHHHHHHCCCHHHH-HHHHHcCCCCCCCCC--CCCCHHHHHHHcC
Confidence 45667777766644 455567777776543 3577888877766
No 184
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=73.81 E-value=2.9 Score=40.76 Aligned_cols=42 Identities=12% Similarity=0.046 Sum_probs=33.1
Q ss_pred HHHHHHhcCCHHHHHHHHHh---CCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIIC---SEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~---~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
-|+.|+..++.+.+ ++|+. .|+|+|.... .+.||||+|+..+
T Consensus 151 pL~~A~~~g~~~~v-~~Ll~~~~~gad~~~~d~--~g~tpLh~A~~~~ 195 (273)
T 2pnn_A 151 PLSLAACTNQLAIV-KFLLQNSWQPADISARDS--VGNTVLHALVEVA 195 (273)
T ss_dssp HHHHHHHTTCHHHH-HHHHHCSSCCCCTTCCCT--TSCCHHHHHHHHC
T ss_pred HHHHHHHcCCHHHH-HHHHhcccCCCCceeeCC--CCCcHHHHHHHcc
Confidence 47789999988765 46667 8999998754 4789999999855
No 185
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=73.69 E-value=2.7 Score=40.67 Aligned_cols=42 Identities=12% Similarity=0.004 Sum_probs=23.9
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 195 pL~~A~~~~~~~~v-~~Ll~~gad~~~~d~--~g~tpL~~A~~~~ 236 (282)
T 1oy3_D 195 PLHLAVEAQAASVL-ELLLKAGADPTARMY--GGRTPLGSALLRP 236 (282)
T ss_dssp HHHHHHHTTCHHHH-HHHHHTTCCTTCCCT--TSCCHHHHHHTSS
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCCccccc--CCCCHHHHHHHcC
Confidence 35556666665543 344456666666432 3466777666655
No 186
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=73.62 E-value=3.1 Score=40.01 Aligned_cols=44 Identities=14% Similarity=0.109 Sum_probs=34.0
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCC-----------CCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQA-----------SYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~-----------~~~t~l~la~~~~ 588 (629)
-|+.|+..++++.+ ++|+..|+|+|...... .+.||||+|+..+
T Consensus 93 ~L~~A~~~g~~~~v-~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~ 147 (256)
T 2etb_A 93 ALHIAIEKRSLQCV-KLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTK 147 (256)
T ss_dssp HHHHHHHTTCHHHH-HHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTT
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcC
Confidence 37789999988765 46668899999875431 2789999999876
No 187
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=73.60 E-value=2.9 Score=40.81 Aligned_cols=44 Identities=16% Similarity=0.102 Sum_probs=34.3
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCC------------CCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQ------------ASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~------------~~~~t~l~la~~~~ 588 (629)
-|+.|+..++++.+- +|+..|+|+|..... ..+.||||+|+..+
T Consensus 104 pL~~A~~~g~~~~v~-~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g 159 (273)
T 2pnn_A 104 ALHIAIERRNMTLVT-LLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTN 159 (273)
T ss_dssp HHHHHHHTTCHHHHH-HHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHH-HHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcC
Confidence 377899999987654 666889999987541 14789999999877
No 188
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=73.59 E-value=3.2 Score=38.09 Aligned_cols=41 Identities=17% Similarity=-0.031 Sum_probs=19.4
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 105 L~~A~~~~~~~~v-~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~ 145 (192)
T 2rfm_A 105 LMWSIIFGYSEMS-YFLLEHGANVNDRNL--EGETPLIVASKYG 145 (192)
T ss_dssp HHHHHHHTCHHHH-HHHHHTTCCSSCCCT--TCCCHHHHHHHHT
T ss_pred HHHHHHcCCHHHH-HHHHHCCCCCCCCCC--CCCCHHHHHHHcC
Confidence 3445555554433 233345555554432 2455555555444
No 189
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=73.52 E-value=3.4 Score=36.86 Aligned_cols=43 Identities=16% Similarity=0.060 Sum_probs=34.1
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
.|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+.
T Consensus 72 ~L~~A~~~~~~~~v-~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~ 114 (167)
T 3v31_A 72 ALSLACSKGYTDIV-KMLLDCGVDVNEYDW--NGGTPLLYAVHGNH 114 (167)
T ss_dssp HHHHHHHHTCHHHH-HHHHHHTCCTTCCCT--TSCCHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHH-HHHHHCCCCCCcCCC--CCCCHHHHHHHcCC
Confidence 57788999888765 466688999997644 47899999998883
No 190
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=73.27 E-value=2.7 Score=42.87 Aligned_cols=43 Identities=16% Similarity=0.129 Sum_probs=32.3
Q ss_pred HHHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 543 QQLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 543 ~~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
-.|+.|+..++++.+-. |+..|+|+|.... .+.||||+|+..+
T Consensus 22 t~L~~Aa~~g~~~~v~~-Ll~~g~~~~~~d~--~g~t~L~~A~~~g 64 (364)
T 3ljn_A 22 EKIHVAARKGQTDEVRR-LIETGVSPTIQNR--FGCTALHLACKFG 64 (364)
T ss_dssp HHHHHHHHHTCHHHHHH-HHHTTCCTTCCCT--TCCCHHHHHHHHC
T ss_pred CHHHHHHHcCCHHHHHH-HHHcCCCccccCC--CCCcHHHHHHHcC
Confidence 45788888888877654 4477898887644 4678999988776
No 191
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=72.77 E-value=3.1 Score=40.86 Aligned_cols=42 Identities=14% Similarity=0.022 Sum_probs=32.3
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|+.|+..++...+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 202 ~L~~A~~~g~~~~v-~~Ll~~g~d~~~~d~--~g~tpL~~A~~~~ 243 (299)
T 1s70_B 202 ALHVAAAKGYTEVL-KLLIQARYDVNIKDY--DGWTPLHAAAHWG 243 (299)
T ss_dssp HHHHHHHHTCHHHH-HHHHTTTCCTTCCCT--TCCCHHHHHHHTT
T ss_pred HHHHHHHCCcHHHH-HHHHHcCCCCCCcCC--CCCcHHHHHHhcC
Confidence 47778888888754 466688999998653 4689999998776
No 192
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=72.66 E-value=3 Score=40.29 Aligned_cols=42 Identities=7% Similarity=-0.134 Sum_probs=19.4
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|..|+..++.+. +++|+..|||+|.... .+.|||+.|..-.
T Consensus 228 pL~~A~~~~~~~~-v~~Ll~~ga~~~~~~~--~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 228 PLGSALLRPNPIL-ARLLRAHGAPEPEDGG--DKLSPCSSSGSDS 269 (282)
T ss_dssp HHHHHHTSSCHHH-HHHHHHTTCCCCCCC----------------
T ss_pred HHHHHHHcCCcHH-HHHHHHcCCCcCcCCC--cccccccccCCcc
Confidence 4667777777654 4566678888887654 3678888886655
No 193
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=72.59 E-value=3.7 Score=36.82 Aligned_cols=42 Identities=21% Similarity=0.245 Sum_probs=33.3
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
-|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 105 ~L~~A~~~~~~~~v-~~Ll~~ga~~~~~~~--~g~t~l~~A~~~~ 146 (172)
T 3v30_A 105 PLLYAVRGNHVKCV-EALLARGADLTTEAD--SGYTPMDLAVALG 146 (172)
T ss_dssp HHHHHHHTTCHHHH-HHHHHTTCCTTCCCT--TSCCHHHHHHHHT
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCccccCC--CCCCHHHHHHHhC
Confidence 36778888888765 466688999998654 4689999999877
No 194
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=72.52 E-value=4 Score=34.02 Aligned_cols=41 Identities=22% Similarity=0.168 Sum_probs=18.7
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|..|+..++++.+- +|+..|+|+|.... .+.||||+|+..+
T Consensus 39 L~~A~~~~~~~~~~-~Ll~~g~~~~~~~~--~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 39 LHLAARNGHLEVVK-LLLEAGADVNAKDK--NGRTPLHLAARNG 79 (126)
T ss_dssp HHHHHHHTCHHHHH-HHHHTTCCTTCCCT--TSCCHHHHHHHTT
T ss_pred HHHHHHcCcHHHHH-HHHHcCCCCcccCC--CCCcHHHHHHHcC
Confidence 34455555544332 33345555554332 2345555555444
No 195
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=72.38 E-value=2.6 Score=37.51 Aligned_cols=29 Identities=7% Similarity=-0.109 Sum_probs=15.6
Q ss_pred HHHHHhCCCCccccCCCCCCCC-cchHHhhhh
Q 006831 558 YRQIICSEPNVNAIHGQASYGK-RLPLATVME 588 (629)
Q Consensus 558 ~~~l~~~gadvn~~~~~~~~~t-~l~la~~~~ 588 (629)
+++|+..|+|+|.... .+.| |||+|+..+
T Consensus 60 v~~Ll~~g~~~~~~d~--~g~ttpL~~A~~~~ 89 (156)
T 1bi7_B 60 AELLLLHGAEPNCADP--ATLTRPVHDAAREG 89 (156)
T ss_dssp HHHHHTTTCCCCCCCT--TTCCCHHHHHHHHT
T ss_pred HHHHHHcCCCCCCcCC--CCCcHHHHHHHHCC
Confidence 3444555666665433 2345 666666554
No 196
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=72.34 E-value=2.2 Score=41.42 Aligned_cols=44 Identities=14% Similarity=-0.021 Sum_probs=33.6
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
.|+.|+..++...+ ++|+..|+|+|.... ..+.||||+|+..+.
T Consensus 80 ~L~~A~~~g~~~~v-~~Ll~~ga~~~~~~~-~~g~t~L~~A~~~g~ 123 (244)
T 3ui2_A 80 ALLFVAGLGSDKCV-RLLAEAGADLDHRDM-RGGLTALHMAAGYVR 123 (244)
T ss_dssp HHHHHHHHTCHHHH-HHHHHTTCCTTCCCS-SSCCCHHHHHHHTTC
T ss_pred HHHHHHHCCCHHHH-HHHHHcCCCCCcCCC-CCCCCHHHHHHHcCC
Confidence 57788888888655 566688999988653 247899999998874
No 197
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=72.18 E-value=2.9 Score=39.45 Aligned_cols=42 Identities=10% Similarity=0.042 Sum_probs=33.4
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|..|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 143 pL~~A~~~~~~~~v-~~Ll~~ga~~~~~~~--~g~t~l~~A~~~~ 184 (222)
T 3ehr_A 143 ALHAAAWKGYADIV-QLLLAKGARTDLRNI--EKKLAFDMATNAA 184 (222)
T ss_dssp HHHHHHHHTCHHHH-HHHHHHTCCSCCCCT--TSCCHHHHCCSHH
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCCccccC--CCCCHHHHhcchh
Confidence 57788998887755 466678999998655 4689999998777
No 198
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=72.14 E-value=3.5 Score=34.38 Aligned_cols=42 Identities=21% Similarity=0.162 Sum_probs=33.0
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|..|+..++++.+- .|+..|+|+|.... .+.||||.|+..+
T Consensus 5 ~L~~A~~~~~~~~v~-~Ll~~~~~~~~~~~--~g~t~L~~A~~~~ 46 (126)
T 1n0r_A 5 PLHLAARNGHLEVVK-LLLEAGADVNAKDK--NGRTPLHLAARNG 46 (126)
T ss_dssp HHHHHHHHTCHHHHH-HHHHHTCCTTCCCT--TSCCHHHHHHHHT
T ss_pred HHHHHHHcCcHHHHH-HHHHcCCCCCCcCC--CCCcHHHHHHHcC
Confidence 367899999988665 55578999998644 4689999998766
No 199
>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A
Probab=72.02 E-value=1.2 Score=32.86 Aligned_cols=37 Identities=30% Similarity=0.713 Sum_probs=29.9
Q ss_pred CCCCCCCCCCCC-CCceecccceeEeccccccccccCc
Q 006831 402 GNNKCADCGASE-PDWASLNLGVLICIQCSGVHRNLGV 438 (629)
Q Consensus 402 ~N~~CaDCg~~~-p~w~s~n~Gv~lC~~CsgvHR~LG~ 438 (629)
....|.+|+... |.|-.-.-|..||-.|.--++.-|+
T Consensus 3 ~~~~C~~C~tt~Tp~WR~gp~G~~LCNaCGl~~k~~~~ 40 (46)
T 1gnf_A 3 EARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQ 40 (46)
T ss_dssp CSCCCTTTCCCCCSSCBCCTTCCCBCSHHHHHHHHTCS
T ss_pred CCCCCCCcCCCCCCcCccCCCCCccchHHHHHHHHcCC
Confidence 457899999976 7999999999999999865555444
No 200
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=71.43 E-value=42 Score=33.10 Aligned_cols=58 Identities=9% Similarity=0.083 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhhhHHH--HHHHHHHHHHHHHHHhhhhHhhh
Q 006831 38 VIEEDLHNARTSFEQARFNLVGALSN---VEAKKRFEL--LEAVGGTMDAHLRFFKQGYELLH 95 (629)
Q Consensus 38 E~a~eL~~aRk~f~~asldyv~~l~~---vq~kk~~e~--le~l~~~~~a~~~ff~~g~e~~~ 95 (629)
++-.+.-+.|+.|.+++.+|-.++.. +.-+|..+. -|.-..+..+...|.+...+.+.
T Consensus 121 ~dlk~~ke~kk~fdk~~~~yd~al~k~~~~~k~k~~e~~l~Ea~~~l~~~Rk~f~~~~ldyv~ 183 (265)
T 2q12_A 121 RDLKEILTLKEVFQIASNDHDAAINRYSRLSKKRENDKVKYEVTEDVYTSRKKQHQTMMHYFC 183 (265)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445668999999999999987777 444443322 35555556666666666555443
No 201
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=70.25 E-value=3.6 Score=40.77 Aligned_cols=41 Identities=20% Similarity=0.173 Sum_probs=20.5
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++++.+- +|+..|+|+|.... .+.||||+|+..+
T Consensus 96 L~~A~~~g~~~~v~-~Ll~~ga~~~~~~~--~g~t~L~~A~~~~ 136 (285)
T 3d9h_A 96 LHEACLGGHLSCVK-ILLKHGAQVNGVTA--DWHTPLFNACVSG 136 (285)
T ss_dssp HHHHHHTTCHHHHH-HHHHTTCCSSCCCT--TCCCHHHHHHHHT
T ss_pred HHHHHHCCcHHHHH-HHHHCCCCCCCCCC--CCCCHHHHHHHcC
Confidence 44555555554333 33345555555432 2456666665555
No 202
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=70.24 E-value=7.1 Score=35.64 Aligned_cols=42 Identities=19% Similarity=0.139 Sum_probs=33.2
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|+.|+..++.+.+- +|+..|+|+|.... .+.||||+|+..+
T Consensus 71 ~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~--~g~t~L~~A~~~~ 112 (192)
T 2rfm_A 71 ALIWAVKNNRLGIAE-KLLSKGSNVNTKDF--SGKTPLMWSIIFG 112 (192)
T ss_dssp HHHHHHHTTCHHHHH-HHHHHTCCTTCCCT--TSCCHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHH-HHHHCCCCCCCCCC--CCCcHHHHHHHcC
Confidence 477899999987654 55678999998644 4789999998876
No 203
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=69.64 E-value=4.1 Score=39.27 Aligned_cols=41 Identities=17% Similarity=0.049 Sum_probs=26.1
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++.+.+- +|+..|+|+|.... .+.||||+|+..+
T Consensus 161 L~~A~~~~~~~~v~-~Ll~~ga~~~~~~~--~g~tpL~~A~~~~ 201 (253)
T 1yyh_A 161 LHWAAAVNNVDAAV-VLLKNGANKDMQNN--REETPLFLAAREG 201 (253)
T ss_dssp HHHHHHHTCHHHHH-HHHHTTCCTTCCCT--TSCCHHHHHHHHT
T ss_pred HHHHHHcCCHHHHH-HHHHcCCCCCCcCC--CCCCHHHHHHHCC
Confidence 56677777766443 44566777776533 3567777776655
No 204
>1u5k_A Hypothetical protein; OBD-fold, Zn-binding, recombination,replication; 2.00A {Deinococcus radiodurans} SCOP: b.40.4.13 g.45.1.2 PDB: 1w3s_A 2v1c_C
Probab=69.54 E-value=4.3 Score=40.02 Aligned_cols=51 Identities=25% Similarity=0.592 Sum_probs=37.9
Q ss_pred cCCCCCCCCCCCCCCceecccceeEeccccccccccCcccceeeEeecCCCcCChhHHHHHhhcChhHH
Q 006831 401 YGNNKCADCGASEPDWASLNLGVLICIQCSGVHRNLGVHISKVRSLTLDVKVWEPSVLNLFQSLGNIYA 469 (629)
Q Consensus 401 p~N~~CaDCg~~~p~w~s~n~Gv~lC~~CsgvHR~LG~hiSkVrSl~lD~~~w~~~~l~~~~~~GN~~~ 469 (629)
|.-..|+.||.++..|.+...|.++|..|...+ ..+++.+..|+.+-+...
T Consensus 148 p~l~~C~~cg~~~~~~fs~~~Gg~~c~~~~~~~------------------~l~~~~l~~l~~l~~~~~ 198 (244)
T 1u5k_A 148 PQTARCARCGAPDPEHPDPLGGQLLCSKCAALP------------------PYPPAVLDFLRHAVRRTV 198 (244)
T ss_dssp CCCSBCTTTCCBSCCEECTTTSSEECTTTCSSC------------------CCCHHHHHHHHHTTTSCH
T ss_pred CCcCccccCCCCCCCcEecccCEEECcccCCCC------------------CCCHHHHHHHHHHHhCCH
Confidence 456789999999667889999999999996432 135777777766655443
No 205
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=69.48 E-value=3.9 Score=38.77 Aligned_cols=41 Identities=15% Similarity=0.007 Sum_probs=22.0
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 155 L~~A~~~~~~~~v-~~Ll~~ga~~~~~~~--~g~tpl~~A~~~~ 195 (236)
T 1ikn_D 155 LHLAVDLQNPDLV-SLLLKCGADVNRVTY--QGYSPYQLTWGRP 195 (236)
T ss_dssp HHHHHHTTCHHHH-HHHHTTTCCSCCCCT--TCCCGGGGCTTSS
T ss_pred HHHHHHcCCHHHH-HHHHHcCCCCCcccC--CCCCHHHHHHccC
Confidence 4555665555433 344455666665432 3456666665555
No 206
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=69.40 E-value=4 Score=42.90 Aligned_cols=42 Identities=10% Similarity=-0.001 Sum_probs=25.2
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|+.|+..++...+ ++|+..|||+|.... .+.||||+|+..+
T Consensus 271 pLh~A~~~g~~~~v-~~LL~~Gad~~~~d~--~G~TpL~~A~~~g 312 (368)
T 3jue_A 271 PLHHATILGHTGLA-CLFLKRGADLGARDS--EGRDPLTIAMETA 312 (368)
T ss_dssp HHHHHHHHTCHHHH-HHHHHTTCCTTCCCT--TSCCHHHHHHHTT
T ss_pred HHHHHHHcCcHHHH-HHHHHCcCCCCCcCC--CCCCHHHHHHHCC
Confidence 35566666665543 344566777766533 3567777776666
No 207
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=69.06 E-value=2.9 Score=41.51 Aligned_cols=43 Identities=16% Similarity=0.091 Sum_probs=29.2
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
.|+.|+..++++.+ ++|+..|+|+|.... .+.||||+|+..+.
T Consensus 65 ~L~~A~~~g~~~~v-~~Ll~~ga~~~~~d~--~g~t~L~~A~~~g~ 107 (285)
T 3kea_A 65 PLHQAATLEDTKIV-KILLFSGLDDSQFDD--KGNTALYYAVDSGN 107 (285)
T ss_dssp HHHHHTTSSSCHHH-HHHHHTTCCTTCCCT--TSCCHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHH-HHHHHCCCCCCCcCC--CCCcHHHHHHHcCC
Confidence 46677777776654 455577888887543 46788888887773
No 208
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=68.96 E-value=4.7 Score=37.69 Aligned_cols=43 Identities=21% Similarity=0.099 Sum_probs=24.7
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|..|+..++++.+- +|+..|++++..... .+.||||+|+..+
T Consensus 45 ~L~~A~~~~~~~~v~-~Ll~~~~~~~~~~~~-~~~t~L~~A~~~~ 87 (240)
T 3eu9_A 45 LLHWAAINNRIDLVK-YYISKGAIVDQLGGD-LNSTPLHWATRQG 87 (240)
T ss_dssp HHHHHHHTTCHHHHH-HHHHTTCCTTCCBTT-TTBCHHHHHHHHT
T ss_pred HHHHHHHhCCHHHHH-HHHHcCCcchhhcCC-cCCChhHHHHHcC
Confidence 355666666665443 444566666654332 2467777776665
No 209
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=68.87 E-value=4.6 Score=38.03 Aligned_cols=42 Identities=26% Similarity=0.162 Sum_probs=29.3
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
-|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 153 ~L~~A~~~~~~~~v-~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~ 194 (241)
T 1k1a_A 153 PLIHAVENNSLSMV-QLLLQHGANVNAQMY--SGSSALHSASGRG 194 (241)
T ss_dssp HHHHHHHTTCHHHH-HHHHHTTCCTTCBCT--TSCBHHHHHHHHT
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCCCCcCC--CCCCHHHHHHHcC
Confidence 36677777777654 455577888887643 4678888887765
No 210
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=68.43 E-value=4.5 Score=40.88 Aligned_cols=42 Identities=12% Similarity=0.119 Sum_probs=33.0
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|+.|+..++.+.+ ++|+..|||+|.... .+.||||+|+..+
T Consensus 229 pLh~A~~~g~~~~v-~~Ll~~gad~~~~d~--~G~TpL~~A~~~~ 270 (301)
T 2b0o_E 229 ALHYAALYNQPDCL-KLLLKGRALVGTVNE--AGETALDIARKKH 270 (301)
T ss_dssp HHHHHHHTTCHHHH-HHHHHTTCCCSCCCT--TSCCHHHHHHHHT
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCCCCcCC--CCCCHHHHHHHcC
Confidence 36788888888755 466688999998654 4689999998866
No 211
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=67.98 E-value=5 Score=37.39 Aligned_cols=41 Identities=17% Similarity=0.049 Sum_probs=24.7
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++.+.+- +|+..|+|+|.... .+.||||+|+..+
T Consensus 129 L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~--~g~t~L~~A~~~~ 169 (223)
T 2f8y_A 129 LHWAAAVNNVDAAV-VLLKNGANKDMQNN--REETPLFLAAREG 169 (223)
T ss_dssp HHHHHHTTCHHHHH-HHHHTTCCTTCCCT--TCCCHHHHHHHHT
T ss_pred HHHHHHcCCHHHHH-HHHHcCCCCCCcCC--CCcCHHHHHHHcC
Confidence 55666666665443 44466777776532 3567777776655
No 212
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=66.70 E-value=5.3 Score=38.46 Aligned_cols=41 Identities=15% Similarity=0.107 Sum_probs=22.9
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++.+.+- +|+..|+|+|.... .+.||||+|+..+
T Consensus 61 L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~--~g~t~L~~A~~~~ 101 (253)
T 1yyh_A 61 LHLAARYSRSDAAK-RLLEASADANIQDN--MGRTPLHAAVSAD 101 (253)
T ss_dssp HHHHHHTTCHHHHH-HHHHTTCCTTCCCT--TSCCHHHHHHHHT
T ss_pred HHHHHHcCCHHHHH-HHHHcCCCCCCCCC--CCCCHHHHHHHcC
Confidence 55566666655443 34456666665432 3456666666544
No 213
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=66.65 E-value=42 Score=31.87 Aligned_cols=94 Identities=13% Similarity=0.134 Sum_probs=68.7
Q ss_pred hhhhhHhHHHHHHHHHHhcccC-CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 006831 8 VAFNGDGNFVLQAREKFLSLRK-STRMDVAVVIEEDLHNARTSFEQARFNLVGALSNVEAKKRFELLEAVGGTMDAHLRF 86 (629)
Q Consensus 8 ~~Fe~~q~kyd~~~~ky~slsk-~k~~~~~~E~a~eL~~aRk~f~~asldyv~~l~~vq~kk~~e~le~l~~~~~a~~~f 86 (629)
+.|+++-..||..--|--.|.| +|..+.++--..-|..+-..|.+---|+.-.|+.|-.++---|-+.....|..++.|
T Consensus 122 ~nf~e~RLiYDHYKlKvdELEK~~KdSeKI~RNQsKLssAEtaYkqvcsDiInkMnkll~n~~riineaasavwstqlqy 201 (294)
T 3caz_A 122 KETDKYRERYDHYKVKLDNLEKKNKDQERIERNQQKFKDAEAAYSSVCADLIQKMETVWKKHVSIFAEAASAVWSTQLQY 201 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhHHHHHhccchHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5688888889888888888887 566677766666788888888888888888888887666656677777888888777
Q ss_pred HhhhhHhhhhchHHH
Q 006831 87 FKQGYELLHQMEPFI 101 (629)
Q Consensus 87 f~~g~e~~~~l~p~~ 101 (629)
-..--....-+-||+
T Consensus 202 akaleaaanpivpyl 216 (294)
T 3caz_A 202 AKALEAAANPIVPYL 216 (294)
T ss_dssp HHHHHHHHGGGGGGG
T ss_pred HHHHHHhcCCCchhh
Confidence 554333334444544
No 214
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=66.26 E-value=5.7 Score=36.98 Aligned_cols=41 Identities=15% Similarity=0.107 Sum_probs=18.0
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++++.+- .|+..|+|+|.... .+.||||+|+..+
T Consensus 29 L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~--~g~t~L~~A~~~~ 69 (223)
T 2f8y_A 29 LHLAARYSRSDAAK-RLLEASADANIQDN--MGRTPLHAAVSAD 69 (223)
T ss_dssp HHHHHHTTCHHHHH-HHHHTTCCTTCCCT--TSCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHHH-HHHHcCCCCCCcCC--CCCCHHHHHHHcC
Confidence 44455555544332 23344555554322 2345555554433
No 215
>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I*
Probab=66.25 E-value=2 Score=31.26 Aligned_cols=34 Identities=24% Similarity=0.554 Sum_probs=27.8
Q ss_pred CCCCCCCCCC-CCceecccceeEeccccccccccC
Q 006831 404 NKCADCGASE-PDWASLNLGVLICIQCSGVHRNLG 437 (629)
Q Consensus 404 ~~CaDCg~~~-p~w~s~n~Gv~lC~~CsgvHR~LG 437 (629)
..|.+|+... |.|-.-..|..+|-.|.--.+.-|
T Consensus 2 ~~C~~C~tt~Tp~WR~gp~G~~LCNaCGl~~k~~~ 36 (43)
T 2vut_I 2 TTCTNCFTQTTPLWRRNPEGQPLCNACGLFLKLHG 36 (43)
T ss_dssp CCCSSSCCCCCSCCEECTTSCEECHHHHHHHHHHS
T ss_pred CcCCccCCCCCCccccCCCCCcccHHHHHHHHHhC
Confidence 4799999976 789999999999999986555444
No 216
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=65.88 E-value=5.9 Score=36.94 Aligned_cols=43 Identities=14% Similarity=-0.083 Sum_probs=31.0
Q ss_pred HHHHHHhcCCHHHHHHHHHhCC-CCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSE-PNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~g-advn~~~~~~~~~t~l~la~~~~~ 589 (629)
-|+.|+..++.+.+ ++|+..| +|+|.... .+.||||+|+..+.
T Consensus 143 ~L~~A~~~~~~~~v-~~Ll~~g~~~~~~~d~--~g~t~L~~A~~~~~ 186 (228)
T 2dzn_A 143 PLHRAASVGSLKLI-ELLCGLGKSAVNWQDK--QGWTPLFHALAEGH 186 (228)
T ss_dssp HHHHHHHTTCHHHH-HHHHTTTCCCSCCCCT--TSCCHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHH-HHHHhcCcccccCcCC--CCCCHHHHHHHcCC
Confidence 46778888887654 4555777 88887643 46799999988773
No 217
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=65.65 E-value=4.3 Score=41.35 Aligned_cols=41 Identities=15% Similarity=-0.013 Sum_probs=32.6
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 215 L~~A~~~g~~~~v-~~Ll~~gad~~~~d~--~g~tpL~~A~~~g 255 (364)
T 3ljn_A 215 LHWAILINWEDVA-MRFVEMGIDVNMEDN--EHTVPLYLSVRAA 255 (364)
T ss_dssp THHHHTTTCHHHH-HHHHTTTCCTTCCCT--TSCCHHHHHHHTC
T ss_pred HHHHHHcCCHHHH-HHHHHcCCCCCCCCC--CCCCHHHHHHHhC
Confidence 6678888887755 566689999998654 4789999998776
No 218
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=65.04 E-value=4.7 Score=43.70 Aligned_cols=41 Identities=12% Similarity=0.123 Sum_probs=32.5
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++.+.+ ++|+..|||+|.... .+.||||+|+..+
T Consensus 211 Lh~A~~~g~~~~v-~~Ll~~ga~~~~~d~--~g~tpl~~A~~~~ 251 (497)
T 3lvq_E 211 LHYAALYNQPDCL-KLLLKGRALVGTVNE--AGETALDIARKKH 251 (497)
T ss_dssp HHHHTTTTCHHHH-HHHHHTCCCCSCCCT--TCCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHH-HHHHHcCCCCCCcCC--CCCCHHHHHHHcC
Confidence 6778888888755 566688999998754 4689999998765
No 219
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=65.01 E-value=5.8 Score=38.47 Aligned_cols=42 Identities=10% Similarity=0.075 Sum_probs=33.0
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
.|+.|+..++.+.+- +|+..|+|+|.. ..+.||||+|+..+.
T Consensus 72 ~L~~A~~~~~~~~v~-~Ll~~g~~~~~~---~~g~t~L~~A~~~~~ 113 (261)
T 2xai_A 72 PLFNACVSGSWDCVN-LLLQHGASVQPE---SDLASPIHEAARRGH 113 (261)
T ss_dssp HHHHHHHHTCHHHHH-HHHHTTCCSSCS---CTTCCHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHH-HHHHCCCCCCCC---CCCCCHHHHHHHcCc
Confidence 478899999887654 666889999864 237899999998873
No 220
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=64.81 E-value=6 Score=37.23 Aligned_cols=42 Identities=24% Similarity=0.179 Sum_probs=29.5
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|..|+..++++.+- +|+..|+++|.... .+.||||+|+..+
T Consensus 47 ~L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~--~g~t~L~~A~~~~ 88 (237)
T 3b7b_A 47 PLMEAAENNHLEAVK-YLIKAGALVDPKDA--EGSTCLHLAAKKG 88 (237)
T ss_dssp HHHHHHHTTCHHHHH-HHHTTTCCCCCCCT--TSCCHHHHHHHTT
T ss_pred HHHHHHHhCCHHHHH-HHHhCCCCCCCCCC--CCCcHHHHHHHcC
Confidence 467778887776554 55577888877543 3578888888777
No 221
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=64.58 E-value=6.3 Score=36.94 Aligned_cols=41 Identities=17% Similarity=0.123 Sum_probs=26.7
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|..|+..++.+.+- +|+..|+|+|.... .+.||||+|+..+
T Consensus 143 L~~A~~~~~~~~v~-~Ll~~g~~~~~~~~--~g~t~L~~A~~~~ 183 (231)
T 3aji_A 143 MHRAAAKGNLKMVH-ILLFYKASTNIQDT--EGNTPLHLACDEE 183 (231)
T ss_dssp HHHHHHHTCHHHHH-HHHHTTCCSCCCCT--TSCCHHHHHHHTT
T ss_pred HHHHHHcCCHHHHH-HHHhcCCCccccCC--CCCCHHHHHHHCC
Confidence 56677777766543 44567787776533 3578888877655
No 222
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=64.29 E-value=6.4 Score=36.87 Aligned_cols=42 Identities=17% Similarity=0.212 Sum_probs=27.7
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
-|..|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 76 ~L~~A~~~~~~~~v-~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~ 117 (231)
T 3aji_A 76 PLHIAASAGXDEIV-KALLVKGAHVNAVNQ--NGCTPLHYAASKN 117 (231)
T ss_dssp HHHHHHHHTCHHHH-HHHHHTTCCTTCCCT--TSCCHHHHHHHTT
T ss_pred HHHHHHHcCHHHHH-HHHHHcCCCCCCCCC--CCCCHHHHHHHcC
Confidence 45667777776644 455567888776543 3578888887766
No 223
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=64.07 E-value=6.5 Score=37.67 Aligned_cols=43 Identities=19% Similarity=0.116 Sum_probs=31.8
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|..|+..++.+.+-.+|-..|+|+|.... .+.||||+|+..+
T Consensus 222 ~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~--~g~t~l~~A~~~~ 264 (285)
T 1wdy_A 222 PLILAVEKKHLGLVQRLLEQEHIEINDTDS--DGKTALLLAVELK 264 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHSSSCCTTCCCT--TSCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHhccCCCccccCC--CCCcHHHHHHHcC
Confidence 367788888887665444238999998654 4689999998876
No 224
>3dfx_A Trans-acting T-cell-specific transcription factor GATA-3; activator, DNA-binding, metal-binding, nucleus; HET: DNA; 2.70A {Mus musculus} PDB: 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A*
Probab=63.92 E-value=1.7 Score=34.30 Aligned_cols=37 Identities=19% Similarity=0.468 Sum_probs=30.3
Q ss_pred CCCCCCCCCCCC-CCceecccceeEeccccccccccCc
Q 006831 402 GNNKCADCGASE-PDWASLNLGVLICIQCSGVHRNLGV 438 (629)
Q Consensus 402 ~N~~CaDCg~~~-p~w~s~n~Gv~lC~~CsgvHR~LG~ 438 (629)
....|.+|+... |.|-.-..|..||-.|.-..+..|+
T Consensus 6 ~~~~C~~C~tt~Tp~WR~gp~G~~LCNACGl~~~~~~~ 43 (63)
T 3dfx_A 6 AGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNI 43 (63)
T ss_dssp TTCCCTTTCCSCCSSCCCCTTSCCCCHHHHHHHHHHSS
T ss_pred CCCcCCCcCCCCCCccCCCCCCCchhhHHHHHHHHcCC
Confidence 567899999975 7999999999999999865555553
No 225
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=63.34 E-value=5.6 Score=37.66 Aligned_cols=43 Identities=19% Similarity=0.064 Sum_probs=33.2
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|+.|+..++...+ ++|+..|+|+|..... .+.||||+|+..+
T Consensus 120 ~L~~A~~~~~~~~v-~~Ll~~g~~~~~~~~~-~g~tpL~~A~~~~ 162 (236)
T 1ikn_D 120 CLHLASIHGYLGIV-ELLVSLGADVNAQEPC-NGRTALHLAVDLQ 162 (236)
T ss_dssp HHHHHHHTTCHHHH-HHHHHHTCCTTCCCTT-TCCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCCCCCCCC-CCCCHHHHHHHcC
Confidence 36778888887755 5666889999986541 4689999998876
No 226
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=63.02 E-value=4.5 Score=40.08 Aligned_cols=43 Identities=9% Similarity=0.011 Sum_probs=32.9
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCC-CCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASY-GKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~-~t~l~la~~~~~ 589 (629)
.|+.|+..++++.+- +|+..|+|+|..... + .||||+|+..+.
T Consensus 98 ~L~~A~~~g~~~~v~-~Ll~~ga~~~~~~~~--g~~t~L~~A~~~~~ 141 (285)
T 3kea_A 98 ALYYAVDSGNMQTVK-LFVKKNWRLMFYGKT--GWKTSFYHAVMLND 141 (285)
T ss_dssp HHHHHHHTTCHHHHH-HHHHHCGGGGGCSSS--GGGSHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHH-HHHhcCCCCCccCCC--CCCCHHHHHHHcCC
Confidence 477888888887654 556789999976443 4 699999998883
No 227
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=62.69 E-value=7 Score=36.76 Aligned_cols=41 Identities=10% Similarity=0.040 Sum_probs=25.0
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|..|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 148 L~~A~~~~~~~~~-~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~ 188 (237)
T 3b7b_A 148 LHWAAFSGCVDIA-EILLAAKCDLHAVNI--HGDSPLHIAAREN 188 (237)
T ss_dssp HHHHHHHCCHHHH-HHHHTTTCCTTCCCT--TCCCHHHHHHHTT
T ss_pred HHHHHHCCCHHHH-HHHHHcCCCCCCcCC--CCCCHHHHHHHhC
Confidence 5556666665543 345566777776543 3567777776655
No 228
>4gat_A Nitrogen regulatory protein AREA; DNA binding protein, transcription factor, zinc binding domain, complex (transcription regulation/DNA); HET: DNA; NMR {Emericella nidulans} SCOP: g.39.1.1 PDB: 5gat_A* 6gat_A* 7gat_A*
Probab=62.68 E-value=2.7 Score=33.42 Aligned_cols=37 Identities=27% Similarity=0.591 Sum_probs=30.2
Q ss_pred CCCCCCCCCCCC-CCceecccceeEeccccccccccCc
Q 006831 402 GNNKCADCGASE-PDWASLNLGVLICIQCSGVHRNLGV 438 (629)
Q Consensus 402 ~N~~CaDCg~~~-p~w~s~n~Gv~lC~~CsgvHR~LG~ 438 (629)
+...|++|+... |.|-.-.-|..||-.|.-..+..|+
T Consensus 8 ~~~~C~~C~t~~Tp~WR~gp~G~~LCNaCGl~~~~~~~ 45 (66)
T 4gat_A 8 GPTTCTNCFTQTTPLWRRNPEGQPLCNACGLFLKLHGV 45 (66)
T ss_dssp SSCCCTTTCCCCCSSCEEETTTEEECHHHHHHHHHHCS
T ss_pred CCCCCCCCCCCCCCcCCcCCCCCCccHHHHHHHHHcCC
Confidence 467999999975 8999999999999999765555443
No 229
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=61.41 E-value=13 Score=43.35 Aligned_cols=38 Identities=11% Similarity=0.145 Sum_probs=31.9
Q ss_pred cceEEEeeCC-----cEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006831 280 RFCFRIISPT-----KVYTLQAENTLDQMDWIEKINGVIASLL 317 (629)
Q Consensus 280 rfcF~Iit~~-----rty~LqAeSe~E~~~WI~aI~~aI~~~l 317 (629)
..||.|+... +++.|.|.++++++.|+..|+..+....
T Consensus 96 ~~~fTIvyg~~~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~~~~ 138 (799)
T 2zkm_X 96 LKTLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLALVKHPL 138 (799)
T ss_dssp GTEEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHHCTT
T ss_pred cceEEEEECCCccceeEEEEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 4689999754 3689999999999999999998887654
No 230
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=61.34 E-value=6.9 Score=38.57 Aligned_cols=43 Identities=9% Similarity=0.030 Sum_probs=33.6
Q ss_pred HHHHHHhcCCHHHHHHHHHh-CCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIIC-SEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~-~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
-|..|+..++.+.+- +|+. .|+|+|.... .+.||||+|+..+.
T Consensus 219 pLh~A~~~g~~~iv~-~Ll~~~gad~~~~d~--~g~TpL~~A~~~g~ 262 (276)
T 4hbd_A 219 ALMCACEHGHKEIAG-LLLAVPSCDISLTDR--DGSTALMVALDAGQ 262 (276)
T ss_dssp HHHHHHHHTCHHHHH-HHHTSTTCCTTCCCT--TSCCHHHHHHHHTC
T ss_pred HHHHHHHCCCHHHHH-HHHhcCCCCCcCcCC--CCCCHHHHHHHcCC
Confidence 367788999877654 5556 8999998654 47899999998874
No 231
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=60.86 E-value=8.6 Score=36.05 Aligned_cols=43 Identities=16% Similarity=0.050 Sum_probs=31.6
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
-|+.|+..++.+.+ ++|+..|+|+|.... .+.||||+|+..+.
T Consensus 49 ~L~~A~~~~~~~~v-~~Ll~~g~~~~~~~~--~g~t~l~~A~~~~~ 91 (241)
T 1k1a_A 49 PLHLAVITTLPSVV-RLLVTAGASPMALDR--HGQTAAHLACEHRS 91 (241)
T ss_dssp HHHHHHHTTCHHHH-HHHHHTTCCTTCCCT--TSCCHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCccccCC--CCCCHHHHHHHcCC
Confidence 46778888887654 455678898887643 46799999988773
No 232
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=60.58 E-value=6.9 Score=36.49 Aligned_cols=42 Identities=19% Similarity=0.140 Sum_probs=33.0
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|..|+..++++.+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 180 ~L~~A~~~~~~~~v-~~Ll~~g~~~~~~~~--~g~t~l~~A~~~~ 221 (240)
T 3eu9_A 180 ALHWAVLAGNTTVI-SLLLEAGANVDAQNI--KGESALDLAKQRK 221 (240)
T ss_dssp HHHHHHHHTCHHHH-HHHHHHTCCTTCBCT--TSCBHHHHHHHTT
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCCCCcCC--CCCCHHHHHHHcC
Confidence 47788999888755 456678999998654 4689999998877
No 233
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=60.21 E-value=8.6 Score=35.79 Aligned_cols=42 Identities=17% Similarity=0.109 Sum_probs=24.2
Q ss_pred HHHHHHhcCCHHHHHHHHHhCC--CCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSE--PNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~g--advn~~~~~~~~~t~l~la~~~~ 588 (629)
-|+.|+..++.+.+- +|+..| +|+|.... .+.||||+|+..+
T Consensus 75 ~L~~A~~~~~~~~~~-~Ll~~g~~~~~~~~~~--~g~t~L~~A~~~~ 118 (228)
T 2dzn_A 75 PFHIACSVGNLEVVK-SLYDRPLKPDLNKITN--QGVTCLHLAVGKK 118 (228)
T ss_dssp HHHHHHHHCCHHHHH-HHHSSSSCCCTTCCCT--TCCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHH-HHHhCCCCcccccCCc--CCCCHHHHHHHcC
Confidence 356666666665443 444556 55555432 3567777777665
No 234
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=60.02 E-value=7.7 Score=40.02 Aligned_cols=42 Identities=12% Similarity=-0.052 Sum_probs=26.3
Q ss_pred HHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 545 LWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 545 l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
|+.|+..++++.+-.+|-..|+|+|.... .+.||||+|+..+
T Consensus 283 Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~--~g~TpL~~A~~~g 324 (373)
T 2fo1_E 283 LHYAAQVSNMPIVKYLVGEKGSNKDKQDE--DGKTPIMLAAQEG 324 (373)
T ss_dssp HHHHHSSCCHHHHHHHHHHSCCCTTCCCT--TCCCHHHHHHHHT
T ss_pred HHHHHHhCCHHHHHHHHHhcCCCccCcCC--CCCCHHHHHHHcC
Confidence 56677777766554333234577776543 3567888777665
No 235
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=56.35 E-value=1.1e+02 Score=31.67 Aligned_cols=97 Identities=11% Similarity=0.179 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HhhhhHH-HHHHH-HHHHHHHHHHHhhhh---------------HhhhhchHH
Q 006831 41 EDLHNARTSFEQARFNLVGALSNV---EAKKRFE-LLEAV-GGTMDAHLRFFKQGY---------------ELLHQMEPF 100 (629)
Q Consensus 41 ~eL~~aRk~f~~asldyv~~l~~v---q~kk~~e-~le~l-~~~~~a~~~ff~~g~---------------e~~~~l~p~ 100 (629)
.++-+.|+.|.+++.+|-.++... .-++..+ .++.. ..+..+...|.+... ++++.+-.|
T Consensus 124 ~~~ke~kk~fek~~~~yd~al~k~~~~~k~k~~e~~~~ea~~~l~~~rk~f~~~~ldy~~~l~~l~~rk~~e~le~l~~~ 203 (385)
T 2q13_A 124 KEILTLKEVFQIASNDHDAAINRYSRLSKKRENDKVKYEVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGY 203 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445578999999999999888873 2222222 22222 333334444444433 333344444
Q ss_pred HHHHHHHHHHHH----HhHHHHHHHHHHHHHHHHHHHHHHH
Q 006831 101 INQVLAYAQQSR----ECSDYEQASLHQRMQDYLKQIDRES 137 (629)
Q Consensus 101 ~~~l~~~~q~~r----~~~~~~~~~L~~~m~~~k~qi~~~~ 137 (629)
+.....+.++-- +.++.....|...++.++.+++.+.
T Consensus 204 ~~a~~~ff~~g~~~~~~~~~~~~~~l~~~l~~~r~~~~~~~ 244 (385)
T 2q13_A 204 MQAQISFFKMGSENLNEQLEEFLANIGTSVQNVRREMDSDI 244 (385)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444433333222 3444555566677777777666543
No 236
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=55.58 E-value=11 Score=37.21 Aligned_cols=42 Identities=10% Similarity=0.079 Sum_probs=32.9
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
.|+.|+..++.+.+ ++|+..|+++|... .+.||||+|+..+.
T Consensus 128 ~L~~A~~~~~~~~v-~~Ll~~g~~~~~~~---~g~t~L~~A~~~g~ 169 (285)
T 3d9h_A 128 PLFNACVSGSWDCV-NLLLQHGASVQPES---DLASPIHEAARRGH 169 (285)
T ss_dssp HHHHHHHHTCHHHH-HHHHHTTCCSSCSC---TTSCHHHHHHHHTC
T ss_pred HHHHHHHcCHHHHH-HHHHHCCCCCCCCC---CCCCHHHHHHHcCC
Confidence 47789999988765 46668899998643 37899999998873
No 237
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=53.04 E-value=12 Score=38.65 Aligned_cols=42 Identities=14% Similarity=0.151 Sum_probs=33.8
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|..|+..++++.+ ++|+..|+|+|.... .+.||||+|+..+
T Consensus 316 pL~~A~~~g~~~iv-~~Ll~~gad~~~~d~--~g~t~l~~A~~~g 357 (373)
T 2fo1_E 316 PIMLAAQEGRIEVV-MYLIQQGASVEAVDA--TDHTARQLAQANN 357 (373)
T ss_dssp HHHHHHHHTCHHHH-HHHHHTTCCSSCCCS--SSCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHH-HHHHHcCCCccCCCC--CCCCHHHHHHHcC
Confidence 46778999988765 466688999998754 4789999998877
No 238
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=52.97 E-value=11 Score=39.18 Aligned_cols=44 Identities=16% Similarity=0.122 Sum_probs=33.3
Q ss_pred HHHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 543 QQLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 543 ~~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
-.|+.|+..++++.+- +|+..|+|+|.... .+.||||+|+..+.
T Consensus 49 t~L~~A~~~g~~~~v~-~Ll~~g~~~~~~~~--~g~t~L~~A~~~g~ 92 (437)
T 1n11_A 49 TPLHMAARAGHTEVAK-YLLQNKAKVNAKAK--DDQTPLHCAARIGH 92 (437)
T ss_dssp CHHHHHHHHTCHHHHH-HHHHHTCCSSCCCT--TSCCHHHHHHHHTC
T ss_pred CHHHHHHHcCCHHHHH-HHHhCCCCCCCCCC--CCCCHHHHHHHCCC
Confidence 3577888888887554 55678999987644 46799999998883
No 239
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=52.91 E-value=14 Score=32.19 Aligned_cols=38 Identities=8% Similarity=-0.049 Sum_probs=27.7
Q ss_pred HhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhhh
Q 006831 549 VRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVMEM 589 (629)
Q Consensus 549 v~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~~ 589 (629)
+..++.+.+- .|+..|+|+|.... .+.||||+|+..+.
T Consensus 43 ~~~~~~~~v~-~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 43 MMFGSTAIAL-ELLKQGASPNVQDT--SGTSPVHDAARTGF 80 (156)
T ss_dssp SCTTCHHHHH-HHHHTTCCTTCCCT--TSCCHHHHHHHTTC
T ss_pred HHcCCHHHHH-HHHHCCCCCCCcCC--CCCCHHHHHHHcCc
Confidence 6667766554 55578999988654 46899999988873
No 240
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=52.15 E-value=38 Score=39.81 Aligned_cols=38 Identities=13% Similarity=0.180 Sum_probs=32.1
Q ss_pred cceEEEeeCC-----cEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006831 280 RFCFRIISPT-----KVYTLQAENTLDQMDWIEKINGVIASLL 317 (629)
Q Consensus 280 rfcF~Iit~~-----rty~LqAeSe~E~~~WI~aI~~aI~~~l 317 (629)
..||.|+... +++.|.|.++++.+.|+..|+..+...+
T Consensus 100 ~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~~~~ 142 (885)
T 3ohm_B 100 EKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMNIL 142 (885)
T ss_dssp TTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHHCHH
T ss_pred ccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHhhhh
Confidence 5789999765 2689999999999999999998887664
No 241
>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A
Probab=50.56 E-value=4.6 Score=35.59 Aligned_cols=36 Identities=31% Similarity=0.749 Sum_probs=28.5
Q ss_pred CCCCCCCCCCC-CCceecccceeEeccccccccccCc
Q 006831 403 NNKCADCGASE-PDWASLNLGVLICIQCSGVHRNLGV 438 (629)
Q Consensus 403 N~~CaDCg~~~-p~w~s~n~Gv~lC~~CsgvHR~LG~ 438 (629)
...|++||+.. |.|-.-.-|-+||-.|.-.++.-|+
T Consensus 5 ~~~C~~Cg~~~Tp~WRr~~~g~~lCnaCgl~~Kl~G~ 41 (115)
T 4hc9_A 5 GRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQ 41 (115)
T ss_dssp -CCCTTTCCSCCSSCEECTTSCEECHHHHHHHHHHSS
T ss_pred CCCCCCCCCccCCcceECCCCCCcCcchhhhhhhccc
Confidence 36899999975 8999989999999999865554443
No 242
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=50.05 E-value=14 Score=38.47 Aligned_cols=42 Identities=12% Similarity=0.193 Sum_probs=32.8
Q ss_pred HHHHHHhcCCHHHHHHHHHhCCCCccccCCCCCCCCcchHHhhhh
Q 006831 544 QLWESVRDNDKKAVYRQIICSEPNVNAIHGQASYGKRLPLATVME 588 (629)
Q Consensus 544 ~l~~av~~~d~~~~~~~l~~~gadvn~~~~~~~~~t~l~la~~~~ 588 (629)
.|..|+..++.+.+ ++|+..|||+|.... .+.|||++|+..+
T Consensus 347 ~L~~A~~~g~~~iv-~~Ll~~ga~~~~~~~--~g~t~l~~A~~~g 388 (437)
T 1n11_A 347 PLHQAAQQGHTDIV-TLLLKNGASPNEVSS--DGTTPLAIAKRLG 388 (437)
T ss_dssp HHHHHHHTTCHHHH-HHHHHTTCCSCCCCS--SSCCHHHHHHHTT
T ss_pred HHHHHHHCChHHHH-HHHHHCcCCCCCCCC--CCCCHHHHHHHcC
Confidence 36778888887654 566688999998654 4689999998776
No 243
>2kae_A GATA-type transcription factor; zinc finger, GATA-type, DNA; NMR {Caenorhabditis elegans}
Probab=49.96 E-value=2.9 Score=33.72 Aligned_cols=36 Identities=22% Similarity=0.583 Sum_probs=28.7
Q ss_pred CCCCCCCCCCC-CCcee--cccceeEeccccccccccCcc
Q 006831 403 NNKCADCGASE-PDWAS--LNLGVLICIQCSGVHRNLGVH 439 (629)
Q Consensus 403 N~~CaDCg~~~-p~w~s--~n~Gv~lC~~CsgvHR~LG~h 439 (629)
...|+.|+... |.|-. -.-| .||-.|.--.+..|++
T Consensus 8 ~~~C~nC~tt~Tp~WRrg~~~~g-~LCNACGl~~~~~~~~ 46 (71)
T 2kae_A 8 SFQCSNCSVTETIRWRNIRSKEG-IQCNACFIYQRKYNKT 46 (71)
T ss_dssp CCCCSSSCCSCCSSCCCCSSSSC-CCSSHHHHHHHHHHSC
T ss_pred CCcCCccCCCCCCccccCCCCCC-ccchHHHHHHHHhCCC
Confidence 46899999975 79998 6778 8999998776666643
No 244
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=49.83 E-value=39 Score=39.41 Aligned_cols=38 Identities=26% Similarity=0.295 Sum_probs=31.2
Q ss_pred cceEEEeeCC-----cEEEEEeCCHHHHHHHHHHHHHHHHHHh
Q 006831 280 RFCFRIISPT-----KVYTLQAENTLDQMDWIEKINGVIASLL 317 (629)
Q Consensus 280 rfcF~Iit~~-----rty~LqAeSe~E~~~WI~aI~~aI~~~l 317 (629)
..||.|+... +...|.|.++++.+.|++.|+..+....
T Consensus 103 ~r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~~~~~ 145 (816)
T 3qr0_A 103 DKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYAYNLL 145 (816)
T ss_dssp HHEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHHHTCHH
T ss_pred ccEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHHHHHHH
Confidence 5789999765 2458999999999999999998875544
No 245
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=44.33 E-value=61 Score=23.79 Aligned_cols=40 Identities=13% Similarity=0.117 Sum_probs=32.6
Q ss_pred HhhhhchHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 006831 92 ELLHQMEPFINQVLAYAQQSRECSDYEQASLHQRMQDYLK 131 (629)
Q Consensus 92 e~~~~l~p~~~~l~~~~q~~r~~~~~~~~~L~~~m~~~k~ 131 (629)
+.++.++..++.++..+...-.+++..+..|.+++..+..
T Consensus 5 ekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~lE~ 44 (46)
T 3swy_A 5 EKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLES 44 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567788899999999999999999999888888765543
No 246
>4akv_A Sorting nexin-33; transport protein, organelle biogenesis; 2.65A {Homo sapiens}
Probab=42.97 E-value=55 Score=34.48 Aligned_cols=59 Identities=8% Similarity=0.247 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhHhhhhchH
Q 006831 41 EDLHNARTSFEQARFNLVGALSNVEAKKRFELLEAVGGTMDAHLRFFKQGYELLHQMEP 99 (629)
Q Consensus 41 ~eL~~aRk~f~~asldyv~~l~~vq~kk~~e~le~l~~~~~a~~~ff~~g~e~~~~l~p 99 (629)
.++.++++.|...+-.....|...+..+..+|-..+..|+..+..|+++-.+.++.+-|
T Consensus 323 ~~~~e~~~r~e~IS~~~~~El~rF~~~Rv~Dfk~~l~eyle~qi~~~~~~~~~le~~l~ 381 (386)
T 4akv_A 323 DEADGIRRRCRVVGFALQAEMNHFHQRRELDFKHMMQNYLRQQILFYQRVGQQLEKTLR 381 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667889999999888899999999999999999999999999999998776655443
No 247
>3dyt_A Sorting nexin-9; 3-helix bundle, BAR domain, PX domain, phosphoprotein, protein transport, SH3 domain, transport, transport protein; 2.08A {Homo sapiens} PDB: 3dyu_A 2raj_A 2rai_A 2rak_A*
Probab=42.02 E-value=54 Score=34.18 Aligned_cols=58 Identities=12% Similarity=0.243 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhHhhhhch
Q 006831 41 EDLHNARTSFEQARFNLVGALSNVEAKKRFELLEAVGGTMDAHLRFFKQGYELLHQME 98 (629)
Q Consensus 41 ~eL~~aRk~f~~asldyv~~l~~vq~kk~~e~le~l~~~~~a~~~ff~~g~e~~~~l~ 98 (629)
.++.++++.|...+-.....|...+..+..+|-..+..|+..+..|+++..++++.+-
T Consensus 303 ~~~~~~~~r~e~is~~~~~El~rF~~~r~~Dfk~~l~~yl~~qi~~~k~~~~~w~~~l 360 (366)
T 3dyt_A 303 QDKQNMVKRVSIMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVQFYETIAEKLRQAL 360 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3577788888888888888889999888889999999999999999998877665543
No 248
>2ykt_A Brain-specific angiogenesis inhibitor 1-associate protein 2; signaling protein, NPY motif, binding pocket; 2.11A {Homo sapiens} PDB: 1y2o_A 1wdz_A
Probab=39.89 E-value=2.2e+02 Score=28.06 Aligned_cols=37 Identities=24% Similarity=0.363 Sum_probs=23.0
Q ss_pred HHHHHHhhhhHHH-HHHHHHHHHHHHHHHhhhhHhhhh
Q 006831 60 ALSNVEAKKRFEL-LEAVGGTMDAHLRFFKQGYELLHQ 96 (629)
Q Consensus 60 ~l~~vq~kk~~e~-le~l~~~~~a~~~ff~~g~e~~~~ 96 (629)
.--.++++++|-| |+.+..++.....|+.++.+++..
T Consensus 187 r~aL~EERrRycflv~~~~~v~~~~~~~h~~~~~~L~~ 224 (253)
T 2ykt_A 187 KTALTEERRRFCFLVEKQCAVAKNSAAYHSKGKELLAQ 224 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666777644 556667777777777676555543
No 249
>1naf_A ADP-ribosylation factor binding protein GGA1, golgi-localized, gamma EAR-; clathrin-adaptor, GAT domain, helical paper-CLIP, three-helix bundle; 2.80A {Homo sapiens} SCOP: a.7.8.1
Probab=38.37 E-value=1.7e+02 Score=26.88 Aligned_cols=92 Identities=12% Similarity=0.058 Sum_probs=53.8
Q ss_pred HHhcccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-hhhhHHHHHHHHHHHHHHHHHHhhhhHhhhhchHH
Q 006831 23 KFLSLRKSTRMDVAVVIEEDLHNARTSFEQARFNLVGALSN-VE-AKKRFELLEAVGGTMDAHLRFFKQGYELLHQMEPF 100 (629)
Q Consensus 23 ky~slsk~k~~~~~~E~a~eL~~aRk~f~~asldyv~~l~~-vq-~kk~~e~le~l~~~~~a~~~ff~~g~e~~~~l~p~ 100 (629)
++..|=+++.|+=+++ |..|-...-.|.+.+.+++.+... |+ .+-..++|..|+..+.-.-..-....|++.+|-..
T Consensus 21 ~L~~Lirs~~PeDL~~-AN~LiK~m~~~d~~r~e~~~k~~seLe~V~~nv~LL~EML~~~~pg~~~~~~d~Ell~eL~~~ 99 (158)
T 1naf_A 21 MLARLLKSSHPEDLRA-ANKLIKEMVQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGSSEDLMKELYQR 99 (158)
T ss_dssp HHHHHHSSCSTTHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-----CCTTHHHHHHHH
T ss_pred HHHHHHhcCChhhHHH-HHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcccHHHHHHHHHH
Confidence 4555667888887775 566666667788888888754322 21 23334455555544322111110023677777777
Q ss_pred HHHHHHHHHHHHHhH
Q 006831 101 INQVLAYAQQSRECS 115 (629)
Q Consensus 101 ~~~l~~~~q~~r~~~ 115 (629)
.+.++..++.+.+..
T Consensus 100 Ck~~qp~i~~Li~e~ 114 (158)
T 1naf_A 100 CERMRPTLFRLASDT 114 (158)
T ss_dssp HHTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHc
Confidence 777887787777653
No 250
>1d4u_A Nucleotide excision repair protein XPA (XPA-MBD); DNA repair, loop-rich domain, relaxation, DNA binding protein; NMR {Homo sapiens} SCOP: a.6.1.2 g.39.1.5 PDB: 1xpa_A
Probab=35.93 E-value=8.6 Score=33.65 Aligned_cols=32 Identities=19% Similarity=0.394 Sum_probs=25.0
Q ss_pred CCCCCCCCCCCCCCc-eecccceeEeccccccc
Q 006831 402 GNNKCADCGASEPDW-ASLNLGVLICIQCSGVH 433 (629)
Q Consensus 402 ~N~~CaDCg~~~p~w-~s~n~Gv~lC~~CsgvH 433 (629)
+...|.+||...-+| ..-+||+-||..|....
T Consensus 4 ~~~~C~eC~~~~~d~~l~~~F~~~VC~~Cr~~~ 36 (111)
T 1d4u_A 4 DYVICEECGKEFMDSYLMDHFDLPTCDDCRDAD 36 (111)
T ss_dssp CCEECTTTCCEESCSSSTTTTSCCCCTTTCSSS
T ss_pred CCCccccCCChhhHHHHHHhCCeeechhhcccc
Confidence 456799999975443 35689999999998763
No 251
>1oxz_A ADP-ribosylation factor binding protein GGA1; GAT domain, membrane protein; 2.80A {Homo sapiens} SCOP: a.7.8.1
Probab=35.36 E-value=2.1e+02 Score=27.06 Aligned_cols=88 Identities=11% Similarity=0.049 Sum_probs=54.5
Q ss_pred HHHhcccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhh-------hhHhh
Q 006831 22 EKFLSLRKSTRMDVAVVIEEDLHNARTSFEQARFNLVGALSNVEAKKRFELLEAVGGTMDAHLRFFKQ-------GYELL 94 (629)
Q Consensus 22 ~ky~slsk~k~~~~~~E~a~eL~~aRk~f~~asldyv~~l~~vq~kk~~e~le~l~~~~~a~~~ff~~-------g~e~~ 94 (629)
+++..|=+++.|+=+++ |..|-...-.|.+.+.+++.+... .++.+..-+..|...++.|.. ..|++
T Consensus 36 a~L~eLirs~~PeDL~~-AN~LiK~m~~~d~~r~e~~~k~~~-----eLe~V~~nv~LL~EML~~~~pg~~~~~~d~Ell 109 (186)
T 1oxz_A 36 KMLARLLKSSHPEDLRA-ANKLIKEMVQEDQKRMEKISKRVN-----AIEEVNNNVKLLTEMVMSHSQGGAAAGSSEDLM 109 (186)
T ss_dssp HHHHHHHSCCSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHTSSSCSCTTTTHHHH
T ss_pred HHHHHHhcCCChhhHHH-HHHHHHHHhccchhhHHHHHHHHH-----HHHHHHHHHHHHHHHHHhcCCCccCccccHHHH
Confidence 35556777888887764 566666666788888888754332 222333333344444444433 34777
Q ss_pred hhchHHHHHHHHHHHHHHHhH
Q 006831 95 HQMEPFINQVLAYAQQSRECS 115 (629)
Q Consensus 95 ~~l~p~~~~l~~~~q~~r~~~ 115 (629)
.+|-...+.++..++.+.+..
T Consensus 110 ~eL~~~Ck~~qp~i~~Li~e~ 130 (186)
T 1oxz_A 110 KELYQRCERMRPTLFRLASDT 130 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 778888888888888877654
No 252
>4glq_A Methyl-accepting chemotaxis protein; chromophore, phytochrome, cyanobacteriochrome, phycoviolobil bilin, BILI-protein; HET: PVN; 1.77A {Thermosynechococcus elongatus} PDB: 4fof_A*
Probab=35.02 E-value=23 Score=32.54 Aligned_cols=41 Identities=20% Similarity=0.240 Sum_probs=33.2
Q ss_pred cceeEeccccccccccCcccceeeEeecCCCcCChhHHHHHhhcChhHHHHHHHhhhcc
Q 006831 421 LGVLICIQCSGVHRNLGVHISKVRSLTLDVKVWEPSVLNLFQSLGNIYANSVWEELLRI 479 (629)
Q Consensus 421 ~Gv~lC~~CsgvHR~LG~hiSkVrSl~lD~~~w~~~~l~~~~~~GN~~~N~i~e~~l~~ 479 (629)
+|++.|..|..-+ .|+++++++++.+++..+-.+-.+.+-.
T Consensus 119 ~GlL~~~~~~~~r------------------~w~~~ei~ll~~lA~ql~iAi~qa~l~~ 159 (171)
T 4glq_A 119 FGLLIAHQASEPR------------------QWQEIEIDQFSELASTGSLVLERLHFLE 159 (171)
T ss_dssp EEEEEEEEESSCC------------------CCCHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred EEEEEEEeCCCCC------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6888888887643 6999999999999999999998888765
No 253
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=35.02 E-value=19 Score=27.57 Aligned_cols=28 Identities=21% Similarity=0.349 Sum_probs=20.3
Q ss_pred CCCCCCCCCCCCceecccceeEecccccc
Q 006831 404 NKCADCGASEPDWASLNLGVLICIQCSGV 432 (629)
Q Consensus 404 ~~CaDCg~~~p~w~s~n~Gv~lC~~Csgv 432 (629)
..|.+||.....+ .-.-|.++|..|--|
T Consensus 12 ~~Cp~C~~~~lv~-D~~~ge~vC~~CGlV 39 (58)
T 1dl6_A 12 VTCPNHPDAILVE-DYRAGDMICPECGLV 39 (58)
T ss_dssp CSBTTBSSSCCEE-CSSSCCEECTTTCCE
T ss_pred ccCcCCCCCceeE-eCCCCeEEeCCCCCE
Confidence 4799999865322 335699999999554
No 254
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=34.21 E-value=1e+02 Score=24.84 Aligned_cols=44 Identities=18% Similarity=0.143 Sum_probs=35.9
Q ss_pred HhhhhchHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 006831 92 ELLHQMEPFINQVLAYAQQSRECSDYEQASLHQRMQDYLKQIDR 135 (629)
Q Consensus 92 e~~~~l~p~~~~l~~~~q~~r~~~~~~~~~L~~~m~~~k~qi~~ 135 (629)
+.+++|+..++.|+..+..+-.+|...+..|.+++..+..++-.
T Consensus 7 EKv~~LE~sld~LQTrfARLLaEy~ssQ~KLKqRit~LE~~~~~ 50 (74)
T 3swf_A 7 EKVTRMESSVDLLQTRFARILAEYESMQQKLKQRLTKVEKFLKP 50 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 45677888899999999999999999999999998776655543
No 255
>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A
Probab=30.41 E-value=17 Score=31.95 Aligned_cols=38 Identities=18% Similarity=0.466 Sum_probs=31.3
Q ss_pred CCCCCCCCCCCC-CCceecccceeEeccccccccccCcc
Q 006831 402 GNNKCADCGASE-PDWASLNLGVLICIQCSGVHRNLGVH 439 (629)
Q Consensus 402 ~N~~CaDCg~~~-p~w~s~n~Gv~lC~~CsgvHR~LG~h 439 (629)
....|++|+... |.|-.-..|-.||-.|.-..+..|++
T Consensus 58 ~~~~C~~C~t~~tp~WRr~~~g~~lCNaCgl~~~~~~~~ 96 (115)
T 4hc9_A 58 AGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNIN 96 (115)
T ss_dssp TTCCCTTTCCSCCSSCEECTTSCEECHHHHHHHHHHSSC
T ss_pred ccccCCCcCCCCcceeEECCCCCCcchHHHHHHHHhCCC
Confidence 468999999975 89999999999999998666555543
No 256
>1tjl_A DNAK suppressor protein; DKSA, transcription factor, RNA polymerase, stringent response, PPGPP, riken structural genomics/proteomics initiative; 2.00A {Escherichia coli} SCOP: a.2.14.1 g.39.1.13 PDB: 3h3p_S
Probab=30.37 E-value=9 Score=35.34 Aligned_cols=33 Identities=18% Similarity=0.353 Sum_probs=22.9
Q ss_pred cCCCCCCCCCCCCCC-ceecccceeEeccccccc
Q 006831 401 YGNNKCADCGASEPD-WASLNLGVLICIQCSGVH 433 (629)
Q Consensus 401 p~N~~CaDCg~~~p~-w~s~n~Gv~lC~~CsgvH 433 (629)
..-..|.+||.+=|. -.-..-|+..|+.|...|
T Consensus 109 g~yg~C~~Cg~~Ip~~Rl~a~P~a~~Ci~Cq~~~ 142 (151)
T 1tjl_A 109 EDFGYCESCGVEIGIRRLEARPTADLCIDCKTLA 142 (151)
T ss_dssp TCCSBCSSSSCBCCHHHHHHCTTCCSCHHHHHHH
T ss_pred CCCceeCCCCCcchHHHHhcCCCcchhHHHHHHH
Confidence 356799999997551 112233688899998765
No 257
>2xi5_A RNA polymerase L, L-protein; transferase, bunyaviridae, orthobunyavirus, aedes triseriatu hydrolase; 2.20A {Bunyavirus la crosse} PDB: 2xi7_A*
Probab=28.16 E-value=51 Score=30.91 Aligned_cols=62 Identities=18% Similarity=0.087 Sum_probs=46.0
Q ss_pred hHHHHHHHHHHhcccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 006831 14 GNFVLQAREKFLSLRKSTRMDVAVVIEEDLHNARTSFEQARFNLVGALSNVEAKKRFELLEAVGGTMD 81 (629)
Q Consensus 14 q~kyd~~~~ky~slsk~k~~~~~~E~a~eL~~aRk~f~~asldyv~~l~~vq~kk~~e~le~l~~~~~ 81 (629)
...|+|.+.|-.+ .+++++++.+..+|.++|..|- .-++|.+|+- +.|-+..+-+.++.++.
T Consensus 4 ~~~~~q~~~RI~~---~~~~~~AKDI~~Dll~~RHDyF--Gre~c~~L~i-eyRnDV~~~dilld~lp 65 (184)
T 2xi5_A 4 YQEYQQFLARINT---ARDACVAKDIDVDLLMARHDYF--GRELCKSLNI-EYRNDVPFIDIILDIRP 65 (184)
T ss_dssp SHHHHHHHHHHHH---CCSHHHHHHHHHHHHHHHHHHH--HHHHHHHHTC-CCCSSCCHHHHHHHHST
T ss_pred HHHHHHHHHHHHc---cCChhHHHhHHHHHHHHHhHHH--HHHHHHHcCc-hhccCCcHHHHHHHHcC
Confidence 3578888888655 5699999999999999999993 3345555555 77777777666666554
No 258
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=27.42 E-value=2.8e+02 Score=29.28 Aligned_cols=22 Identities=23% Similarity=0.351 Sum_probs=10.9
Q ss_pred HhHHHHHHHHHHHHHHHHHHHH
Q 006831 113 ECSDYEQASLHQRMQDYLKQID 134 (629)
Q Consensus 113 ~~~~~~~~~L~~~m~~~k~qi~ 134 (629)
++.+.+...|...++..+.+|+
T Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~ 467 (471)
T 3mq9_A 446 EELEGEITTLNHKLQDASAEVE 467 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444455555555555554
No 259
>3g9m_A Glucocorticoid receptor; glucocorticoid, DNA-binding, allostery, lever ARM, transcription, hormone; HET: DNA; 1.61A {Rattus norvegicus} SCOP: g.39.1.2 PDB: 3g6p_A* 3g6q_B* 3g6r_B* 3g6u_A* 3g8u_A* 3g8x_A* 3g97_B* 3g99_A* 3g9i_A* 3g9j_A* 3fyl_A* 3g9o_B* 3g9p_B* 3g6t_A* 1r4o_A 1r4r_A 1glu_A* 1gdc_A 2gda_A 1rgd_A ...
Probab=26.31 E-value=18 Score=30.24 Aligned_cols=30 Identities=27% Similarity=0.651 Sum_probs=24.2
Q ss_pred CCCCCCCCCCCCCCceecccceeEecccccccc
Q 006831 402 GNNKCADCGASEPDWASLNLGVLICIQCSGVHR 434 (629)
Q Consensus 402 ~N~~CaDCg~~~p~w~s~n~Gv~lC~~CsgvHR 434 (629)
|+..|.=||.+.. ...|||+.|..|.+.-|
T Consensus 1 g~~~C~VCg~~a~---g~hyGv~sC~~Ck~FFR 30 (90)
T 3g9m_A 1 GSHMCLVCSDEAS---GCHYGVLTCGSCKVFFK 30 (90)
T ss_dssp -CCBCTTTCSBCC---EEETTEEECHHHHHHHH
T ss_pred CCCcCccCCCcCc---ccccCCccchhHhHHhh
Confidence 5778999997653 46899999999998765
No 260
>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A
Probab=26.27 E-value=4.3e+02 Score=25.12 Aligned_cols=31 Identities=16% Similarity=0.348 Sum_probs=26.9
Q ss_pred ceEEEeeCC-cEEEEEeCCHHHHHHHHHHHHH
Q 006831 281 FCFRIISPT-KVYTLQAENTLDQMDWIEKING 311 (629)
Q Consensus 281 fcF~Iit~~-rty~LqAeSe~E~~~WI~aI~~ 311 (629)
..|.|+... .++.|.|.|+.+...|+..|+-
T Consensus 116 laFSii~~~~~~L~fvA~s~~~~~~W~DGL~~ 147 (203)
T 3a98_B 116 LAFSILYDSNCQLNFIAPDKHEYCIWTDGLNA 147 (203)
T ss_dssp GEEEEEETTTEEEEEECSSHHHHHHHHHHHHH
T ss_pred eEEEEecCCCceEEEecCCHHHHHHHHHHHHH
Confidence 578988655 6899999999999999999873
No 261
>2uzg_A Ubiquitin carboxyl-terminal hydrolase 33; UBL conjugation pathway, DE-ubiquitination, alternative splicing, metal-binding, thiol protease; NMR {Homo sapiens} SCOP: g.44.1.5
Probab=25.14 E-value=40 Score=28.46 Aligned_cols=28 Identities=29% Similarity=0.678 Sum_probs=22.0
Q ss_pred cCCCCCCCCCCCCCC-ceecc--cceeEecc
Q 006831 401 YGNNKCADCGASEPD-WASLN--LGVLICIQ 428 (629)
Q Consensus 401 p~N~~CaDCg~~~p~-w~s~n--~Gv~lC~~ 428 (629)
+....|.+|++..+. |+++. .|-+-|.+
T Consensus 23 ~~~~~C~~C~~~~~~lw~CL~~~Cg~vgCgr 53 (97)
T 2uzg_A 23 KSLGTCQDCKVQGPNLWACLENRCSYVGCGE 53 (97)
T ss_dssp HTTTCCSSSCCCCSSCEEECCTTCCCEECCT
T ss_pred CCCCcCcCcCCCCCCceeeecccCCCcccCC
Confidence 466799999966655 98888 88888865
No 262
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=23.68 E-value=41 Score=29.14 Aligned_cols=26 Identities=27% Similarity=0.701 Sum_probs=21.3
Q ss_pred CCCCCCCCCCCCCCceecccceeEec
Q 006831 402 GNNKCADCGASEPDWASLNLGVLICI 427 (629)
Q Consensus 402 ~N~~CaDCg~~~p~w~s~n~Gv~lC~ 427 (629)
-...|.+|++...-|+++..|-+-|.
T Consensus 23 ~~~~C~~C~~~~~~W~CL~CG~vgCg 48 (109)
T 3c5k_A 23 VTQPCGDCGTIQENWVCLSCYQVYCG 48 (109)
T ss_dssp TTCCCTTTCCCSSEEEETTTCCEEEC
T ss_pred cCCcCccccCCCCeeeeeecCccccC
Confidence 45789999999888998887777774
No 263
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=21.92 E-value=1.6e+02 Score=26.00 Aligned_cols=36 Identities=14% Similarity=0.307 Sum_probs=29.8
Q ss_pred cceEEEeeCC------cEEEEEeCCHHHHHHHHHHHHHHHHH
Q 006831 280 RFCFRIISPT------KVYTLQAENTLDQMDWIEKINGVIAS 315 (629)
Q Consensus 280 rfcF~Iit~~------rty~LqAeSe~E~~~WI~aI~~aI~~ 315 (629)
+.-|.|+.-. +.|.|.|.|++|+.+=+..|+..++.
T Consensus 74 P~~FKivV~k~~~~e~KrYdfEA~s~~ea~EIV~~ik~~~~~ 115 (121)
T 3ulb_A 74 PEHFKIFVRREGQDDIKRYYFEAVSGQECTEIVTRLQNLLSA 115 (121)
T ss_dssp TTEEEEEECCTTCSSCEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEEccCCCCcceeEEEeCCHHHHHHHHHHHHHHHHH
Confidence 4567777522 79999999999999999999988764
No 264
>1r4i_A Androgen receptor; AR, steroid receptor, protein-DNA complex, transcription/DNA complex; 3.10A {Rattus norvegicus} SCOP: g.39.1.2
Probab=21.57 E-value=24 Score=30.49 Aligned_cols=33 Identities=21% Similarity=0.522 Sum_probs=25.5
Q ss_pred ccCCCCCCCCCCCCCCceecccceeEeccccccccc
Q 006831 400 VYGNNKCADCGASEPDWASLNLGVLICIQCSGVHRN 435 (629)
Q Consensus 400 ~p~N~~CaDCg~~~p~w~s~n~Gv~lC~~CsgvHR~ 435 (629)
.|....|.=||.+. ....|||+.|..|.+..|-
T Consensus 4 ~~~~~~C~VCg~~a---~g~hyGv~sC~aCk~FFRR 36 (105)
T 1r4i_A 4 FPPQKTCLICGDEA---SGAHYGALTCGSCKVFFKR 36 (105)
T ss_dssp --CCCBCSSSCSBE---EEEETTEEEEHHHHHHHHH
T ss_pred CCCCCCCcEeCCCC---CceEeCCcchhhhhhhhce
Confidence 34567899999753 3678999999999998764
No 265
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=21.45 E-value=38 Score=24.71 Aligned_cols=28 Identities=25% Similarity=0.668 Sum_probs=19.5
Q ss_pred CCCCCCCCCCCCceecccceeEecccccc
Q 006831 404 NKCADCGASEPDWASLNLGVLICIQCSGV 432 (629)
Q Consensus 404 ~~CaDCg~~~p~w~s~n~Gv~lC~~Csgv 432 (629)
..|.+||..+-.+ .-.-|.++|..|--+
T Consensus 6 ~~CP~C~~~~l~~-d~~~gelvC~~CG~v 33 (50)
T 1pft_A 6 KVCPACESAELIY-DPERGEIVCAKCGYV 33 (50)
T ss_dssp CSCTTTSCCCEEE-ETTTTEEEESSSCCB
T ss_pred EeCcCCCCcceEE-cCCCCeEECcccCCc
Confidence 4799999854333 224589999999554
No 266
>4fye_A SIDF, inhibitor of growth family, member 3; mixed alpha-beta, phosphatase, phosphoinositides, membrane,; 2.41A {Legionella pneumophila subsp} PDB: 4fyf_A 4fyg_A*
Probab=21.42 E-value=7e+02 Score=25.87 Aligned_cols=91 Identities=19% Similarity=0.260 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhHhh-hhchHHHHHHHHHHHHHHHh
Q 006831 36 AVVIEEDLHNARTSFEQARFNLVGALSNVEAKKRFELLEAVGGTMDAHLRFFKQGYELL-HQMEPFINQVLAYAQQSREC 114 (629)
Q Consensus 36 ~~E~a~eL~~aRk~f~~asldyv~~l~~vq~kk~~e~le~l~~~~~a~~~ff~~g~e~~-~~l~p~~~~l~~~~q~~r~~ 114 (629)
++|-+..|.+.+-.|.+|-|.|....+.=+.+-+-.-|..+-.-+ .||+.. ..-+..|-+|..++...|..
T Consensus 488 itekenalkevkgayrealfsyfeeyqkgegkwdqakldqlknqv--------dgyeksikkqesaiyelhnqidalrka 559 (761)
T 4fye_A 488 ITEKENALKEVKGAYREALFSYFEEYQKGEGKWDQAKLDQLKNQV--------DGYEKSIKKQESAIYELHNQIDALRKA 559 (761)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCCHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHhc--------chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467888899999999999999987766555544433333332222 344433 44556667777777777766
Q ss_pred HHHH-HHHHHHHHHHHHHHHH
Q 006831 115 SDYE-QASLHQRMQDYLKQID 134 (629)
Q Consensus 115 ~~~~-~~~L~~~m~~~k~qi~ 134 (629)
+--+ .-++...++++++||.
T Consensus 560 yytehkgqinkalqelkeqis 580 (761)
T 4fye_A 560 YYTEHKGQINKALQELKEQIS 580 (761)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhhHHHHHHHHHHhcC
Confidence 5444 3466777777777764
No 267
>1hcq_A Protein (estrogen receptor); protein-DNA complex, complexed with drug, transcription/DNA complex; HET: DNA; 2.40A {Homo sapiens} SCOP: g.39.1.2 PDB: 1hcp_A 4aa6_A
Probab=21.11 E-value=29 Score=28.68 Aligned_cols=31 Identities=23% Similarity=0.549 Sum_probs=25.3
Q ss_pred CCCCCCCCCCCCCCceecccceeEeccccccccc
Q 006831 402 GNNKCADCGASEPDWASLNLGVLICIQCSGVHRN 435 (629)
Q Consensus 402 ~N~~CaDCg~~~p~w~s~n~Gv~lC~~CsgvHR~ 435 (629)
....|.=||.+.. ...|||+.|..|.+..|-
T Consensus 3 ~~~~C~VCg~~a~---g~hyGv~sC~aCk~FFRR 33 (84)
T 1hcq_A 3 ETRYCAVCNDYAS---GYHYGVWSCEGCKAFFKR 33 (84)
T ss_dssp CCCBCTTTCSBCC---EEETTEEECHHHHHHHHH
T ss_pred CCCcCcEECCCCC---CeeeCccchHHhhhhhhh
Confidence 4568999997643 568999999999998774
No 268
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae}
Probab=20.70 E-value=62 Score=30.58 Aligned_cols=28 Identities=25% Similarity=0.686 Sum_probs=21.1
Q ss_pred CCCCCCCCCCCce-ecccceeEecccccc
Q 006831 405 KCADCGASEPDWA-SLNLGVLICIQCSGV 432 (629)
Q Consensus 405 ~CaDCg~~~p~w~-s~n~Gv~lC~~Csgv 432 (629)
.|.+||...+.-+ ...-|-.||.+|--|
T Consensus 23 ~CPECGs~~t~IV~D~erGE~VCsdCGLV 51 (197)
T 3k1f_M 23 TCPECKVYPPKIVERFSEGDVVCALCGLV 51 (197)
T ss_dssp CCTTTCCSSCCEEEEGGGTEEEETTTCBB
T ss_pred ECcCCCCcCCeEEEeCCCCEEEEcCCCCC
Confidence 7999998544433 346899999999655
No 269
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=20.58 E-value=5.6e+02 Score=24.46 Aligned_cols=55 Identities=11% Similarity=0.008 Sum_probs=32.9
Q ss_pred hhhhHhHHHHHHHHHHhcccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 006831 9 AFNGDGNFVLQAREKFLSLRKSTRMDVAVVIEEDLHNARTSFEQARFNLVGALSNVEAKKR 69 (629)
Q Consensus 9 ~Fe~~q~kyd~~~~ky~slsk~k~~~~~~E~a~eL~~aRk~f~~asldyv~~l~~vq~kk~ 69 (629)
..+|+..+|++....+-.+.+. .. ...++..++..+.+|.=+|..++..++..+.
T Consensus 137 ~l~Kak~~Y~~~c~e~e~~~~~---~~---s~k~~eK~~~k~~ka~~~Y~~~v~~~n~~~~ 191 (276)
T 2v0o_A 137 ALQKSKENYNAKCVEQERLKKE---GA---TQREIEKAAVKSKKATDTYKLYVEKYALAKA 191 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---CC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhc---CC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677777665554433321 01 1345666677777888888887777765444
No 270
>3j21_d 50S ribosomal protein L34E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=20.58 E-value=26 Score=29.35 Aligned_cols=31 Identities=23% Similarity=0.468 Sum_probs=20.8
Q ss_pred hccCCCCCCCCCCCC-------CC----------ceecccceeEecccc
Q 006831 399 RVYGNNKCADCGASE-------PD----------WASLNLGVLICIQCS 430 (629)
Q Consensus 399 ~~p~N~~CaDCg~~~-------p~----------w~s~n~Gv~lC~~Cs 430 (629)
+.+.--.|+|||.+- |. -++-.|| .+|..|-
T Consensus 29 K~~~~pkC~~cg~~L~Gi~~~Rp~~~~rlsK~~KtvsRaYG-~lC~~Cv 76 (89)
T 3j21_d 29 KKPKIAHCAMCGRPLNGIPRGRPVEMRKLPKTKKRPERPMP-HLCPRCM 76 (89)
T ss_dssp CCCCCCBCSSSCCBCTTCCCCCTTGGGGSCHHHHCCSSSCT-TSCHHHH
T ss_pred ccCCCCCCCCCCCccCCccCccHHHHHhcccCCCCcCCCcc-cchHHHH
Confidence 445556899999852 21 3355689 8898884
Done!