Query 006835
Match_columns 629
No_of_seqs 306 out of 1519
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 10:13:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006835.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006835hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tf4_A T. fusca endo/EXO-cellu 100.0 4E-114 1E-118 977.1 41.5 489 19-575 2-500 (605)
2 2xfg_A Endoglucanase 1; hydrol 100.0 7E-114 2E-118 947.2 35.2 440 17-491 20-465 (466)
3 2yik_A Endoglucanase; hydrolas 100.0 1E-114 5E-119 981.6 29.2 458 1-491 7-518 (611)
4 1g87_A Endocellulase 9G; endog 100.0 1E-112 5E-117 964.7 43.0 486 19-575 2-496 (614)
5 1ia6_A Cellulase CEL9M; cellul 100.0 4E-113 1E-117 937.3 36.0 425 19-491 2-432 (441)
6 1ks8_A Endo-B-1,4-glucanase; c 100.0 1E-112 4E-117 932.2 31.6 430 20-488 2-431 (433)
7 1clc_A Endoglucanase CELD; EC: 100.0 9.9E-99 3E-103 856.6 30.1 418 17-487 123-563 (639)
8 3gzk_A Cellulase; fold from GH 100.0 3.9E-99 1E-103 844.4 26.1 419 17-490 82-536 (537)
9 1ut9_A Cellulose 1,4-beta-cell 100.0 2.6E-96 9E-101 834.0 28.9 442 18-488 96-607 (609)
10 3h7l_A Endoglucanase; dehydrog 100.0 9.4E-67 3.2E-71 581.4 19.9 397 18-484 91-563 (586)
11 3icg_A Endoglucanase D; cellul 99.7 1.4E-17 4.7E-22 186.2 8.2 90 535-628 381-479 (515)
12 3ndz_E Endoglucanase D; cellot 99.6 2E-16 6.9E-21 139.4 7.7 90 535-628 1-99 (107)
13 1exg_A EXO-1,4-beta-D-glycanas 99.6 2.3E-15 7.8E-20 133.7 8.4 78 535-617 6-91 (110)
14 2cwr_A Chitinase; chitin-bindi 99.4 6.6E-13 2.3E-17 116.1 9.7 83 532-628 7-98 (103)
15 1e5b_A Xylanase D; hydrolase, 98.7 2E-09 6.8E-14 91.2 -0.0 65 536-617 2-74 (87)
16 1heh_C Endo-1,4-beta-xylanase 98.5 1.2E-08 4.1E-13 86.5 1.0 66 535-617 2-75 (88)
17 2gz6_A N-acetyl-D-glucosamine 96.3 0.092 3.1E-06 55.4 16.8 142 85-256 53-199 (388)
18 3gt5_A N-acetylglucosamine 2-e 96.2 0.14 4.8E-06 54.7 17.4 121 106-256 69-200 (402)
19 3k7x_A LIN0763 protein; Q92DQ0 95.8 0.12 4E-06 54.4 14.8 122 106-257 109-241 (349)
20 2gz6_A N-acetyl-D-glucosamine 95.8 0.58 2E-05 49.1 20.0 113 118-257 21-143 (388)
21 3ghp_A Cellulosomal scaffoldin 95.4 0.0053 1.8E-07 58.6 2.0 9 392-400 118-126 (227)
22 3gt5_A N-acetylglucosamine 2-e 93.3 0.96 3.3E-05 48.1 14.2 135 107-256 191-337 (402)
23 3k7x_A LIN0763 protein; Q92DQ0 93.3 0.88 3E-05 47.6 13.6 67 172-256 50-119 (349)
24 2zzr_A Unsaturated glucuronyl 91.2 1.2 4.1E-05 47.5 11.6 128 107-256 132-273 (397)
25 2ahf_A Unsaturated glucuronyl 89.7 1.2 4E-05 47.3 9.8 127 108-257 107-249 (377)
26 3k11_A Putative glycosyl hydro 89.5 2.8 9.6E-05 45.3 12.8 118 104-248 286-417 (445)
27 1fp3_A N-acyl-D-glucosamine 2- 89.2 2 6.7E-05 45.4 11.3 119 109-256 14-149 (402)
28 1fp3_A N-acyl-D-glucosamine 2- 86.9 1.7 5.8E-05 45.9 8.9 85 164-256 245-341 (402)
29 1nc5_A Hypothetical protein YT 85.1 5.9 0.0002 41.5 11.9 58 193-256 106-170 (373)
30 1nc5_A Hypothetical protein YT 85.0 4.6 0.00016 42.4 11.1 71 170-257 43-115 (373)
31 2zbl_A Putative isomerase; N-a 81.4 15 0.00053 38.9 13.6 138 106-256 189-343 (421)
32 3k11_A Putative glycosyl hydro 81.3 10 0.00036 40.9 12.1 78 172-256 149-231 (445)
33 3pmm_A Putative cytoplasmic pr 75.9 12 0.00041 39.5 10.4 112 108-256 25-137 (382)
34 2zbl_A Putative isomerase; N-a 72.8 11 0.00038 40.0 9.3 115 109-256 12-137 (421)
35 2ahf_A Unsaturated glucuronyl 69.6 14 0.00047 39.0 9.0 139 87-256 154-312 (377)
36 1gxm_A Pectate lyase; mechanis 66.4 47 0.0016 34.2 11.9 85 107-210 92-182 (332)
37 3pmm_A Putative cytoplasmic pr 62.8 24 0.00083 37.0 9.3 115 66-209 210-332 (382)
38 3icg_A Endoglucanase D; cellul 61.4 7 0.00024 42.8 5.0 16 108-123 82-97 (515)
39 3e6u_A LANC-like protein 1; al 60.2 50 0.0017 34.8 11.3 114 105-256 247-362 (411)
40 1gxm_A Pectate lyase; mechanis 60.1 76 0.0026 32.7 12.1 29 108-136 165-193 (332)
41 1w6k_A Lanosterol synthase; cy 57.8 1.5E+02 0.005 33.9 15.3 92 111-210 480-571 (732)
42 2wnx_A Glycoside hydrolase, fa 56.8 8.7 0.0003 35.9 4.0 39 535-575 11-51 (170)
43 2p0v_A Hypothetical protein BT 49.3 93 0.0032 33.8 11.1 94 108-209 204-319 (489)
44 1r76_A Pectate lyase; A-helica 49.1 81 0.0028 33.4 10.4 86 107-210 170-258 (408)
45 1ifr_A Lamin A/C; immunoglobul 47.2 25 0.00084 30.9 5.1 43 559-610 21-66 (121)
46 2lll_A Lamin-B2; immunoglobuli 46.3 23 0.00079 31.9 4.9 43 559-610 36-81 (139)
47 3jt0_A Lamin-B1; structural ge 43.3 25 0.00084 31.9 4.6 43 559-610 40-84 (144)
48 1ufg_A Lamin A, nuclear lamin; 42.6 30 0.001 31.6 5.1 43 559-610 52-97 (151)
49 1xq4_A Protein APAG; all beta 42.4 1.1E+02 0.0038 27.4 8.8 54 550-609 30-87 (139)
50 2zzr_A Unsaturated glucuronyl 41.1 66 0.0023 34.0 8.3 127 106-256 190-337 (397)
51 2xbt_A Cellulosomal scaffoldin 38.5 42 0.0014 30.8 5.5 42 532-575 5-48 (160)
52 1tza_A APAG protein, SOR45; st 38.0 1.4E+02 0.0047 26.6 8.6 55 549-609 24-82 (134)
53 1yew_A Particulate methane mon 37.6 2.3E+02 0.0078 29.5 11.2 55 555-612 266-332 (382)
54 1c7s_A Beta-N-acetylhexosamini 36.6 1E+02 0.0034 36.0 9.4 80 536-616 10-111 (858)
55 3hn9_A Lamin-B1; structural ge 36.1 38 0.0013 29.7 4.6 43 559-610 27-71 (123)
56 1xvs_A Protein APAG; MCSG APC2 35.8 89 0.003 27.5 6.9 54 550-609 25-82 (126)
57 2f1e_A Protein APAG; APAG prot 34.3 99 0.0034 27.3 7.0 53 551-609 27-83 (127)
58 2g0d_A Nisin biosynthesis prot 27.0 4E+02 0.014 27.3 11.6 70 172-256 283-352 (409)
59 2v8i_A Pectate lyase; periplas 26.1 38 0.0013 36.4 3.3 23 234-256 431-453 (543)
60 3idu_A Uncharacterized protein 23.8 2.4E+02 0.0083 24.6 7.7 49 555-615 35-83 (127)
61 2l0d_A Cell surface protein; s 23.7 3.2E+02 0.011 23.4 8.3 23 555-577 21-43 (114)
62 3iot_A Maltose-binding protein 22.8 18 0.00061 38.3 0.0 17 24-41 17-33 (449)
63 3m0c_C LDL receptor, low-densi 20.8 21 0.00071 41.4 0.0 15 535-549 760-774 (791)
64 2kut_A Uncharacterized protein 20.3 2.2E+02 0.0074 24.9 6.5 55 555-615 18-74 (122)
No 1
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=100.00 E-value=3.6e-114 Score=977.11 Aligned_cols=489 Identities=42% Similarity=0.741 Sum_probs=424.7
Q ss_pred chhhHHHHHHHHHHHHHHhcCCCCCCCCCcCcCCCCCCCCCCCcccccccceeecCCCccccccchhHHHHHHHHHHHHH
Q 006835 19 AGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYG 98 (629)
Q Consensus 19 ~~~~Y~~~l~~sl~ff~~QR~G~lp~~~~~~Wr~~s~l~d~~~~~~DlsGGW~DAGD~~Ky~~~~a~s~~~L~~a~~ef~ 98 (629)
..++|.++|++||+||++||||.+|+.+|+.||+++|+.||++.++||+|||||||||+||++|+|+++++|+|+++||+
T Consensus 2 ~~~~Y~~al~~sl~Ff~~QRsG~lp~~~r~~Wrgds~l~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~ 81 (605)
T 1tf4_A 2 PAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESP 81 (605)
T ss_dssp CSSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCH
T ss_pred CcchHHHHHHHHHHHHHHhcCCCCccccccCCCCCCcCCCcccccccCCCceeECCCCCEeccchHHHHHHHHHHHHHhH
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCChhHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHH
Q 006835 99 KQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMA 178 (629)
Q Consensus 99 ~~~~~~~~~~dlLde~kwgld~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA 178 (629)
+.++++++++|||||||||+|||||||++++.||+||||+..||.+|++||+|+.+|++|.++.++|+|++++++|||||
T Consensus 82 ~~~~~~g~~~d~ldeikwg~Dyllk~~~~~~~~y~qVGdg~~DH~~w~~pe~m~~~r~~y~~~~~~pgsd~a~~~AAAlA 161 (605)
T 1tf4_A 82 EGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMA 161 (605)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHH
T ss_pred HHHhhcCCcccHHHHHHHHHHHHHHhccCCCeEEEEeCCCCcCccccCChhhCCCCCceeEecCCCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcccCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCCcccHHHHHHHHHHHHhCChhHHHHHhhcC
Q 006835 179 AASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNG 258 (629)
Q Consensus 179 ~As~v~k~~d~~~A~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~s~~~De~~wAAaeLy~aTG~~~Yl~~~~~~~ 258 (629)
+||||||++||+||++||++||++|+||++||+.|.++.+ .+++|+|++++.|||+|||+|||+||||++|+++++++.
T Consensus 162 aAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~g~y~~~~~-~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~ 240 (605)
T 1tf4_A 162 ASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVP-AGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEY 240 (605)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTST-THHHHCCSSCSHHHHHHHHHHHHHHHCCHHHHHHHHHHG
T ss_pred HHHhhccccCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCC-ccccccCCCCCchHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988777 889999888999999999999999999999999998876
Q ss_pred cCCCCCCC----C-ccccCCCcchHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHhhc-CCCCccccCCCCceec
Q 006835 259 DSMGGTGW----G-MTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLG-KGSRNVQKTPGGLIFR 332 (629)
Q Consensus 259 ~~~~~~~~----~-~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~-~~~~~~~~tp~Gl~~~ 332 (629)
..++...+ . ...++||++..|+++||+++. ++ +.|++.++.++|.++. ..+++++++|+|+.|.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~--~~--------~~y~~~a~~~~~~~~~~~~~~~~~~tp~Gl~~~ 310 (605)
T 1tf4_A 241 DFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKET--GK--------QKYIDDANRWLDYWTVGVNGQRVPYSPGGMAVL 310 (605)
T ss_dssp GGSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHH--CC--------HHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBCC
T ss_pred HhcccccccccccccccccccchHHHHHHHHHhcc--Ch--------HHHHHHHHHHHHHHhcccCCCccccCCCcceec
Confidence 54432111 1 136899999999999988753 21 3577778888876653 3567889999999999
Q ss_pred ccCchHhHHHHHHHHHHHHHHHHhhcccccccCCCCCChHHHHHHHHhccccccCCCCCCcceEEeeCCCCCCCcccccc
Q 006835 333 QRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRAS 412 (629)
Q Consensus 333 ~~Wgs~~~~~n~a~l~~~y~~~~~~~~~~l~~~~~~~~~~~y~~~A~~qidYiLG~Np~~~SyV~G~G~n~p~~pHHR~s 412 (629)
+.||||||++|.+||+++|++++.+. .++++|+++|++|||||||+||+++|||||||+|+|+|||||++
T Consensus 311 ~~WGs~~~~~n~a~l~~~~a~~~~~~----------~~~~~y~~~A~~qidYiLG~Np~~~SyvvG~G~~~p~~pHHR~s 380 (605)
T 1tf4_A 311 DTWGALRYAANTAFVALVYAKVIDDP----------VRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTA 380 (605)
T ss_dssp CSSSHHHHHHHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHhcccc----------ccHHHHHHHHHHHHHHhcCCCCCCcceEecCCCCCCCCCccccc
Confidence 99999999999999999999976311 24578999999999999999999999999999999999999999
Q ss_pred ccccccCCCCccccCCCccccccCCCCCCCcccceEecCCCC-CCCcCcCCCccccccccccCchHHHHHHHHHhccCCC
Q 006835 413 SIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDA-YDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGG 491 (629)
Q Consensus 413 ~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~-~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~~~g 491 (629)
+|+ |...++.+.+|+++|+|+||||||. .|+|.|+|++|++|||||||||+||++||+|...+||
T Consensus 381 s~~--------------~~~~~~~p~~~~~vl~GaLVGGP~~~~d~y~D~~~~y~~nEvai~~NA~lv~~lA~l~~~~~~ 446 (605)
T 1tf4_A 381 HGS--------------WTDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYGG 446 (605)
T ss_dssp HTC--------------SSSCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHHHHHHHCC
T ss_pred ccC--------------ccccccCCccCCCCCcceEEeCCCCCcccccccccchhhcCCccccchHHHHHHHHHHHhcCC
Confidence 873 2223456778999999999999998 9999999999999999999999999999999999887
Q ss_pred cccccccccCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCceEEEEEEecccCCCCeeEEEEEEEEEeCCCC---c
Q 006835 492 YNQLLPVIVPAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAK---T 568 (629)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~v~~sW~~g~~~~~q~~vtV~N~g~~---~ 568 (629)
+ |.+. . +|+ + .|....+-|+.++.. .+..+.+..+.|.|++.. .
T Consensus 447 --~------p~~~----~-----~~~--------~----~~~~~e~~vea~~~~----~~~~~~~~~~~i~N~s~~p~~~ 493 (605)
T 1tf4_A 447 --T------PLAD----F-----PPT--------E----EPDGPEIFVEAQINT----PGTTFTEIKAMIRNQSGWPARM 493 (605)
T ss_dssp --C------CCSS----C-----SCC--------C----CCSSCSEEEEEEEEE----CCSSEEEEEEEEEECCCTTCCC
T ss_pred --C------cCCC----C-----CCC--------C----CCCCCceEEEEEecc----CCCCceeEEEEEEeCCCCCcee
Confidence 2 1111 0 000 0 111123555555432 133569999999997653 4
Q ss_pred ccceEEE
Q 006835 569 LKNLKLS 575 (629)
Q Consensus 569 i~~w~i~ 575 (629)
+++.+++
T Consensus 494 l~~l~~R 500 (605)
T 1tf4_A 494 LDKGTFR 500 (605)
T ss_dssp BCSEEEE
T ss_pred cCCceEE
Confidence 6788887
No 2
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=100.00 E-value=6.6e-114 Score=947.17 Aligned_cols=440 Identities=41% Similarity=0.721 Sum_probs=394.4
Q ss_pred ccchhhHHHHHHHHHHHHHHhcCCCC-CCCCCcCcCCCCCCCCCCCcccccccceeecCCCccccccchhHHHHHHHHHH
Q 006835 17 ALAGHDYGQALSKSILFFEAQRSGYL-PHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSII 95 (629)
Q Consensus 17 ~~~~~~Y~~~l~~sl~ff~~QR~G~l-p~~~~~~Wr~~s~l~d~~~~~~DlsGGW~DAGD~~Ky~~~~a~s~~~L~~a~~ 95 (629)
+.+.++|.++|+++|+||++||||.+ |+.+|+.||++||+.|+++.++||+|||||||||+||++|+|+++++|+|+++
T Consensus 20 ~~~~~~Y~~~l~~sl~ff~~QRsG~~vp~~~~~~Wr~~shl~Dg~~~~~DlsGGwyDAGD~~Ky~~~~a~t~~~L~w~~~ 99 (466)
T 2xfg_A 20 ATGAFNYGEALQKAIFFYECQRSGKLDSSTLRLNWRGDSGLDDGKDAGIDLTGGWYDAGDHVKFNLPMSYSAAMLGWAVY 99 (466)
T ss_dssp -CCSSCHHHHHHHHHHHHHHTBCBCCCTTTCSBSSCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccccccccccCCCCceeCCCCCeeccccHHHHHHHHHHHH
Confidence 55679999999999999999999997 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCChhHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHH
Q 006835 96 EYGKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAA 175 (629)
Q Consensus 96 ef~~~~~~~~~~~dlLde~kwgld~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AA 175 (629)
||++.+++++++||||||||||+|||||||++++.||+||||+..||.+|++||+|+++|++|.|+.++|+|++++++||
T Consensus 100 e~~~~~~~~~~~~d~ldeikwg~D~llk~~~~~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~~~~pgsd~a~e~AA 179 (466)
T 2xfg_A 100 EYEDAFKQSGQYNHILNNIKWACDYFIKCHPEKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAETSA 179 (466)
T ss_dssp HCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEESSSCCHHHHHHHHH
T ss_pred HhHHHHhcCCCchHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCccccccCCcccCCCCCceeEecCCCCccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCCcccHHHHHHHHHHHHhCChhHHHHHh
Q 006835 176 AMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLG 255 (629)
Q Consensus 176 alA~As~v~k~~d~~~A~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~s~~~De~~wAAaeLy~aTG~~~Yl~~~~ 255 (629)
|||+||||||++||+||++||++||++|+||++||+.|. ....+++|+|++++.||++|||+|||+||||++|+++++
T Consensus 180 AlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~--~~~~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~a~ 257 (466)
T 2xfg_A 180 ALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDG--YTAANGFYNSWSGFYDELSWAAVWLYLATNDSSYLDKAE 257 (466)
T ss_dssp HHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTT--CCTTTTTSCCSSCSHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCC--CCccccccCCCCCCchHHHHHHHHHHHHhCCHHHHHHHH
Confidence 999999999999999999999999999999999999884 345678999888999999999999999999999999999
Q ss_pred hcCcCCCC----CCC-CccccCCCcchHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHhhcCCCCccccCCCCce
Q 006835 256 KNGDSMGG----TGW-GMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLI 330 (629)
Q Consensus 256 ~~~~~~~~----~~~-~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~tp~Gl~ 330 (629)
++...++. ..+ ....|+||+|..|+++||++++ ++.. ..++.++..++.++| ...++++++||+||.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~--~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~tp~Gl~ 329 (466)
T 2xfg_A 258 SYSDKWGYEPQTNIPKYKWAQCWDDVTYGTYLLLARIK--NDNG---KYKEAIERHLDWWTT---GYNGERITYTPKGLA 329 (466)
T ss_dssp HTTTTSCBSTTSSSBCCSSCCBTTBCHHHHHHHHHHHH--CSSC---HHHHHHHHHHHHHTT---CBTTBCCCBCTTSCB
T ss_pred HHHHHhccccccccccccCcCCcchhHHHHHHHHHHhc--CCcH---HHHHHHHHHHHHHHh---ccCCCccccCCcccc
Confidence 87654431 111 1236899999999999998864 3211 234455556666654 235678999999999
Q ss_pred ecccCchHhHHHHHHHHHHHHHHHHhhcccccccCCCCCChHHHHHHHHhccccccCCCCCCcceEEeeCCCCCCCcccc
Q 006835 331 FRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHR 410 (629)
Q Consensus 331 ~~~~Wgs~~~~~n~a~l~~~y~~~~~~~~~~l~~~~~~~~~~~y~~~A~~qidYiLG~Np~~~SyV~G~G~n~p~~pHHR 410 (629)
|.+.||||||++|.+||+++|++++. |. ...+.+|+++|++|||||||+| ++|||||||+|+|+|||||
T Consensus 330 ~~~~Wgs~~~~~n~afl~~~y~~~~~-------~~--~~~~~~y~~~A~~qidYiLG~N--~~SyvvG~G~~~p~~pHHR 398 (466)
T 2xfg_A 330 WLDQWGSLRYATTTAFLACVYSDWEN-------GD--KEKAKTYLEFARSQADYALGST--GRSFVVGFGENPPKRPHHR 398 (466)
T ss_dssp CCCSSSHHHHHHHHHHHHHHHHTCTT-------SC--HHHHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCSCH
T ss_pred ccCCCCchHHHHHHHHHHHHHHHhcC-------CC--cccHHHHHHHHHHhHHhhcCCC--CcceEeccCCCCCCCCcCc
Confidence 99999999999999999999998752 21 1236889999999999999999 9999999999999999999
Q ss_pred ccccccccCCCCccccCCCccccccCCCCCCCcccceEecCCCCCCCcCcCCCccccccccccCchHHHHHHHHHhccCC
Q 006835 411 ASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHG 490 (629)
Q Consensus 411 ~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~~~ 490 (629)
+++++.. .+++.+.|||++|+|+||||||..|+|+|+|++|++|||||||||+||++||+|...+|
T Consensus 399 ~ss~~~~--------------~~~~~p~p~~~vl~GaLVGGP~~~D~y~D~~~~y~~nEvaid~NA~~v~~la~l~~~~g 464 (466)
T 2xfg_A 399 TAHGSWA--------------DSQMEPPEHRHVLYGALVGGPDSTDNYTDDISNYTCNEVACDYNAGFVGLLAKMYKLYG 464 (466)
T ss_dssp HHHTCSS--------------SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHHHHT
T ss_pred hhccCcc--------------ccccCCCCCCCCCccceeeCCCCccCcCcccccccccccchhhhHHHHHHHHHHHHHcC
Confidence 9988521 13456788999999999999999999999999999999999999999999999999988
Q ss_pred C
Q 006835 491 G 491 (629)
Q Consensus 491 g 491 (629)
|
T Consensus 465 ~ 465 (466)
T 2xfg_A 465 E 465 (466)
T ss_dssp C
T ss_pred C
Confidence 7
No 3
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=100.00 E-value=1.4e-114 Score=981.56 Aligned_cols=458 Identities=33% Similarity=0.555 Sum_probs=391.6
Q ss_pred CcchhHHHHHHhhhh-----------cccchhhHHHHHHHHHHHHHHhcCCCCCC-CCCcCcCCCCCCCCC---------
Q 006835 1 MEKFMTPLLLLLCLP-----------LALAGHDYGQALSKSILFFEAQRSGYLPH-NQRVTWRANSGLNDG--------- 59 (629)
Q Consensus 1 ~~~~~~~~~~~~~~~-----------~~~~~~~Y~~~l~~sl~ff~~QR~G~lp~-~~~~~Wr~~s~l~d~--------- 59 (629)
|||+.++|+.++.+. .+.+.++|.++|++||+||++||||++|+ .+|+.||++||+.|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~al~~sl~ff~~QRsG~~~~~~~~~~WR~~shl~D~~~p~~~~~~ 86 (611)
T 2yik_A 7 AKRAVAFLLGIVITAAGIVSFNTVSTSAAGEYNYAKALQYSMFFYDANMCGTGVDENSLLSWRGDCHVYDARLPLDSQNT 86 (611)
T ss_dssp -------------------------------CCHHHHHHHHTHHHHHHBCBTTHHHHCSCTTCCCBCGGGGGEECSTTTB
T ss_pred HHHHHHHHHHHHHHHhhhhccccccccccchhHHHHHHHHHHHHHHHHcCCCCCCcccCCCcCCCCCccccccccccccc
Confidence 778775555443221 14567999999999999999999999886 899999999999998
Q ss_pred -----------------CCcccccccceeecCCCccccccchhHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHH
Q 006835 60 -----------------KASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFI 122 (629)
Q Consensus 60 -----------------~~~~~DlsGGW~DAGD~~Ky~~~~a~s~~~L~~a~~ef~~~~~~~~~~~dlLde~kwgld~ll 122 (629)
++.++||+|||||||||+||++|+|+++++|+|+++||++.|++++++||||||||||+||||
T Consensus 87 ~~~~~~~~~y~~~~~~~~~~~~DlsGGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyll 166 (611)
T 2yik_A 87 NMSDGFISSNRSVLDPDGDGKVDVSGGFHDAGDHVKFGLPEAYAASTVGWGYYEFKDQFRATGQAVHAEVILRYFNDYFM 166 (611)
T ss_dssp SSCHHHHHHHHHHHCTTCSSEECCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHSHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccCCCCcccCCCCceeCCCCCeeccchHHHHHHHHHHHHHhHHHHhhcCCchhHHHHHHHHHHHHH
Confidence 677899999999999999999999999999999999999999999999999999999999999
Q ss_pred Hh-----cCCCCeEEEEeCCCCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHHHHhhhcccCCHHHHHHHHH
Q 006835 123 KA-----HPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLR 197 (629)
Q Consensus 123 k~-----~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA~As~v~k~~d~~~A~~~L~ 197 (629)
|| |+++|.||+||||+..||.+|++||+|+++|++|.|+.++|+|++++++|||||+||||||++||+||++||+
T Consensus 167 kmq~~~~~~~~g~~y~qVgdg~~Dh~~w~~Pe~~~~~R~~y~v~~~~pgsd~a~~~AAAlAaAS~vfk~~D~~yA~~~L~ 246 (611)
T 2yik_A 167 RCTFRDASGNVVAFCHQVGDGDIDHAFWGAPENDTMFRRGWFITKEKPGTDIISATAASLAINYMNFKDTDPQYAAKSLD 246 (611)
T ss_dssp HTEEECTTSCEEEEEEEESCHHHHTTCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HcccccccCCCCcEEEEeCCCCccccCCCChhhCCCCCcceeecCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHH
Confidence 99 7788999999999999999999999999999999999889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCccccccccCCCCcccHHHHHHHHHHHHhCChhHHHHHhhcCcCCCCCCCCccccCCCcch
Q 006835 198 HAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKY 277 (629)
Q Consensus 198 ~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~s~~~De~~wAAaeLy~aTG~~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~ 277 (629)
+||++|+||++||+.|.++.+..+++|+| +++.||++|||+|||++|||++|+++++++...++...| .|+||++.
T Consensus 247 ~Ak~~~~fA~~~~~~y~~~~~~~~~~Y~s-s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~---~~~Wd~~~ 322 (611)
T 2yik_A 247 YAKALFDFAEKNPKGVVQGEDGPKGYYGS-SKWQDDYCWAAAWLYLATQNEHYLDEAFKYYDYYAPPGW---IHCWNDVW 322 (611)
T ss_dssp HHHHHHHHHHHSCCCCCCGGGTTTTTSCC-CCSHHHHHHHHHHHHHHHCCHHHHHHHHHHCCTTSTTTS---CSBTTBCH
T ss_pred HHHHHHHHHHHcCCcccCCCcccCcCCCC-CCcccHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCc---cCccccch
Confidence 99999999999999998777778999998 999999999999999999999999999987654443333 68999999
Q ss_pred HHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHH----------HHHhh-cCCCCccccCCCCceecccCchHhHHHHHHH
Q 006835 278 PGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYF----------MCSCL-GKGSRNVQKTPGGLIFRQRWNNMQFVTSASF 346 (629)
Q Consensus 278 ~g~~~lla~~~~~~~~~~~~~~~~~~~~~ad~~----------~~~~~-~~~~~~~~~tp~Gl~~~~~Wgs~~~~~n~a~ 346 (629)
.|+++||+++..... .......+.|++.++.. +|..+ +..++++++||+|+.|.+.||||+|++|++|
T Consensus 323 ~g~~~lLa~~~~~~~-~~~~~~~~~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~~~~~af 401 (611)
T 2yik_A 323 SGTACILAEINDLYD-KDSQNFEDRYKRASNKNQWEQIDFWKPIQDLLDKWSGGGITVTPGGYVFLNQWGSARYNTAAQL 401 (611)
T ss_dssp HHHHHHHHHHHHHHS-TTSSHHHHHHHHHTTCCTTSCCCTTHHHHHHHHHHHTTSSCBCTTSCBCSCSTTHHHHHHHHHH
T ss_pred HHHHHHHHhcccccc-ccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCCceeccCCccccccCCCchHHHHHHHHH
Confidence 999999887643110 01112234455444332 23222 2245788999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccccCCCCCChHHHHHHHHhccccccCCCCCCcceEEeeCCCCCCCccccccccccccCCCCcccc
Q 006835 347 LATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSC 426 (629)
Q Consensus 347 l~~~y~~~~~~~~~~l~~~~~~~~~~~y~~~A~~qidYiLG~Np~~~SyV~G~G~n~p~~pHHR~s~~~~~~~~~~~~~c 426 (629)
|+++|++++. ..+++|+++|++|||||||+||+++|||||||+|+|+|||||+++++.
T Consensus 402 l~~~ya~~~~------------~~~~~y~~~A~~qidYiLG~NP~~~SyvvG~G~~~p~~pHHR~a~~~~---------- 459 (611)
T 2yik_A 402 IALVYDKHHG------------DTPSKYANWARSQMDYLLGKNPLNRCYVVGYSSNSVKYPHHRAASGLK---------- 459 (611)
T ss_dssp HHHHHHHTTT------------SSCCHHHHHHHHHHHHHTTCSTTCCBSBTTSSTTBCCCCBCHHHHCCS----------
T ss_pred HHHHHHHhcC------------ccHHHHHHHHHHhHHhhcCCCCCCcceEeccCCCCCCCCcchhhcCcc----------
Confidence 9999998652 245789999999999999999999999999999999999999998852
Q ss_pred CCCccccccCCCCCCCcccceEecCCCCCCCcCcCCCccccccccccCchHHHHHHHHHhccCCC
Q 006835 427 RGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGG 491 (629)
Q Consensus 427 ~~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~~~g 491 (629)
+++.+.||+++|+|+||||||..|+|.|+|++|++|||||||||+||++||+|...+|+
T Consensus 460 ------~~~~p~p~~~vl~GaLVGGPd~~d~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~~~~ 518 (611)
T 2yik_A 460 ------DANDSSPHKYVLYGALVGGPDASDQHVDRTNDYIYNEVAIDYNAAFVGACAGLYRFFGD 518 (611)
T ss_dssp ------CTTCCSCCSSCCTTCBCSCCCTTSCCCCCTTCTTTTBCCHHHHHHHHHHHHHHHHHHCC
T ss_pred ------cccCCCCCCCCCCceeecCCCcccCcCCCCcceeeccceecCccHHHHHHHHHHHhcCC
Confidence 13567889999999999999999999999999999999999999999999999999988
No 4
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=100.00 E-value=1.4e-112 Score=964.71 Aligned_cols=486 Identities=37% Similarity=0.651 Sum_probs=416.5
Q ss_pred chhhHHHHHHHHHHHHHHhcCCCCCCCCCcCcCCCCCCCCCCCcccccccceeecCCCccccccchhHHHHHHHHHHHHH
Q 006835 19 AGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYG 98 (629)
Q Consensus 19 ~~~~Y~~~l~~sl~ff~~QR~G~lp~~~~~~Wr~~s~l~d~~~~~~DlsGGW~DAGD~~Ky~~~~a~s~~~L~~a~~ef~ 98 (629)
+.++|.++|++||+||++||||++|+.+++.||++||+.||++.++||+|||||||||+||++|+|+++++|+|+++||+
T Consensus 2 ~~~~Y~~al~~sl~ff~~QRsG~lp~~~~~~WRgdshl~Dg~~~~~DlsGGwyDAGD~~Kf~~p~a~t~~~L~w~~~e~~ 81 (614)
T 1g87_A 2 GTYNYGEALQKSIMFYEFQRSGDLPADKRDNWRDDSGMKDGSDVGVDLTGGWYDAGDHVKFNLPMSYTSAMLAWSLYEDK 81 (614)
T ss_dssp -CCCHHHHHHHHHHHHHHHBCBSCCTTCSBSSCCCBSTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCcccccccccccCCCCeeeCCCCcEeccccHHHHHHHHHHHHHhH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCChhHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHH
Q 006835 99 KQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMA 178 (629)
Q Consensus 99 ~~~~~~~~~~dlLde~kwgld~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA 178 (629)
+.+++++++||||||||||+|||||||++++.||+||||+..||.+|++||+|+++|++|.|+.++|+|++++++|||||
T Consensus 82 ~~~~~~g~~~d~ldeikwg~Dyllk~~~~~~~~y~qVGdg~~DH~~w~~pe~~~~~r~~y~v~~~~pgsd~a~e~AAAlA 161 (614)
T 1g87_A 82 DAYDKSGQTKYIMDGIKWANDYFIKCNPTPGVYYYQVGDGGKDHSWWGPAEVMQMERPSFKVDASKPGSAVCASTAASLA 161 (614)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHTCCSTTCEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHH
T ss_pred HHHhhCCChHHHHHHHHHHHHHHHHhccCCCcEEEEecCCCcCccccCCcccCCCCCcceEecCCCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcccCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCCcccHHHHHHHHHHHHhCChhHHHHHhhcC
Q 006835 179 AASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNG 258 (629)
Q Consensus 179 ~As~v~k~~d~~~A~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~s~~~De~~wAAaeLy~aTG~~~Yl~~~~~~~ 258 (629)
+||||||++||+||++||++||++|+||++||+.+. ....+++|+| +++.||++|||+|||+||||++|+++++++.
T Consensus 162 aAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~--~~~~~~~Y~s-s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~ 238 (614)
T 1g87_A 162 SAAVVFKSSDPTYAEKCISHAKNLFDMADKAKSDAG--YTAASGYYSS-SSFYDDLSWAAVWLYLATNDSTYLDKAESYV 238 (614)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHCCCTT--CCTTTTTSCC-SCSHHHHHHHHHHHHHHHCCHHHHHHHHHTG
T ss_pred HHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCC--CCcCcCCcCC-CCchhHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999864 4456789998 9999999999999999999999999999866
Q ss_pred cCCCC----CCC-CccccCCCcchHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHhhc-CCCCccccCCCCceec
Q 006835 259 DSMGG----TGW-GMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLG-KGSRNVQKTPGGLIFR 332 (629)
Q Consensus 259 ~~~~~----~~~-~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~-~~~~~~~~tp~Gl~~~ 332 (629)
..++. ..+ ....|+||++..|+++||+++. ++ ..|++.++.+++.++. ..++++++||+||.|.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~--~~--------~~~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~ 308 (614)
T 1g87_A 239 PNWGKEQQTDIIAYKWGQCWDDVHYGAELLLAKLT--NK--------QLYKDSIEMNLDFWTTGVNGTRVSYTPKGLAWL 308 (614)
T ss_dssp GGSCBCTTSSSBCCSSCCBTTBCHHHHHHHHHHHH--CC--------HHHHHHHHHHHHHHTTCBTTBCCEECTTSCEEC
T ss_pred HhhccccccccccccCCcCccchHHHHHHHHHhcc--Cc--------HHHHHHHHHHHHHhhhccCCCccccCCCCceec
Confidence 54431 111 1236899999999999998864 22 1344444444443332 3567899999999999
Q ss_pred ccCchHhHHHHHHHHHHHHHHHHhhcccccccCCCCCChHHHHHHHHhccccccCCCCCCcceEEeeCCCCCCCcccccc
Q 006835 333 QRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRAS 412 (629)
Q Consensus 333 ~~Wgs~~~~~n~a~l~~~y~~~~~~~~~~l~~~~~~~~~~~y~~~A~~qidYiLG~Np~~~SyV~G~G~n~p~~pHHR~s 412 (629)
+.||||||++|++||+++|++++. |. ...+.+|+++|++|||||||+| ++|||||||+|+|+|||||++
T Consensus 309 ~~Wgs~~~~~n~afl~~~y~~~~~-------~~--~~~~~~y~~~A~~qidYiLG~n--~~SyvvG~G~~~p~~pHHR~s 377 (614)
T 1g87_A 309 FQWGSLRHATTQAFLAGVYAEWEG-------CT--PSKVSVYKDFLKSQIDYALGST--GRSFVVGYGVNPPQHPHHRTA 377 (614)
T ss_dssp CSSSHHHHHHHHHHHHHHHHHSTT-------SC--HHHHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCBCHHH
T ss_pred cCCCcHHHHHHHHHHHHHHHHhhC-------CC--ccCHHHHHHHHHHHHHHhcCCC--CcceEeccCCCCCCCCcchhh
Confidence 999999999999999999998752 21 1236889999999999999998 899999999999999999999
Q ss_pred ccccccCCCCccccCCCccccccCCCCCCCcccceEecCCCCCCCcCcCCCccccccccccCchHHHHHHHHHhccCCCc
Q 006835 413 SIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGGY 492 (629)
Q Consensus 413 ~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~~~g~ 492 (629)
+++.. .+++.+.||+++|+|+||||||..|+|.|+|++|++|||||||||+||++||+|...+|+
T Consensus 378 s~~~~--------------~~~~~p~p~~~~l~GaLVGGP~~~D~y~D~~~~y~~nEvai~~NA~lv~~lA~l~~~~~~- 442 (614)
T 1g87_A 378 HGSWT--------------DQMTSPTYHRHTIYGALVGGPDNADGYTDEINNYVNNEIACDYNAGFTGALAKMYKHSGG- 442 (614)
T ss_dssp HTCSS--------------SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHHHHCC-
T ss_pred ccCcc--------------ccccCCCCCCCCccccEeeCCCcccCccccccchhhcCCccccchHHHHHHHHHHHhcCC-
Confidence 88521 134567889999999999999999999999999999999999999999999999999876
Q ss_pred ccccccccCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCceEEEEEEecccCCCCeeEEEEEEEEEeCCC-Cc--c
Q 006835 493 NQLLPVIVPAATPVVTKPSPAPKPKTIPPTKPKTTPAPASSSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSA-KT--L 569 (629)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~v~~sW~~g~~~~~q~~vtV~N~g~-~~--i 569 (629)
+++|.-| |+ ++| ....+-|+.++..+ +..+.+..+.|.|+++ .+ +
T Consensus 443 -~~~~~~~---------------~~--------~~~----~~~e~~vea~in~s----~~~~~~~~~~i~N~s~~pa~~l 490 (614)
T 1g87_A 443 -DPIPNFK---------------AI--------EKI----TNDEVIIKAGLNST----GPNYTEIKAVVYNQTGWPARVT 490 (614)
T ss_dssp -CCCTTCC---------------BC--------CCC----CSCSEEEEEEEEEE----ETTEEEEEEEEEECCCTTCCCB
T ss_pred -CcCCCCC---------------CC--------CCC----CCCceEEEEEeccC----CCCceEEEEEEEECCCCCCeec
Confidence 2111100 00 111 11356666665443 2345999999999988 44 4
Q ss_pred cceEEE
Q 006835 570 KNLKLS 575 (629)
Q Consensus 570 ~~w~i~ 575 (629)
++++|+
T Consensus 491 ~~l~~R 496 (614)
T 1g87_A 491 DKISFK 496 (614)
T ss_dssp CSEEEE
T ss_pred CceEEE
Confidence 799887
No 5
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=100.00 E-value=4e-113 Score=937.31 Aligned_cols=425 Identities=36% Similarity=0.654 Sum_probs=380.5
Q ss_pred chhhHHHHHHHHHHHHHHhcCCCCCC-CCCcCcCCCCCCCCCCCcccccccceeecCCCccccccchhHHHHHHHHHHHH
Q 006835 19 AGHDYGQALSKSILFFEAQRSGYLPH-NQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEY 97 (629)
Q Consensus 19 ~~~~Y~~~l~~sl~ff~~QR~G~lp~-~~~~~Wr~~s~l~d~~~~~~DlsGGW~DAGD~~Ky~~~~a~s~~~L~~a~~ef 97 (629)
+.++|.++|++||+||++||||++|+ .+|+.||++||+.|+++.++||+|||||||||+||++|+++++++|+|+++||
T Consensus 2 ~~~~Y~~al~~sl~ff~~QRsG~~~~~~~~~~wr~~shl~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~ 81 (441)
T 1ia6_A 2 GTHDYSTALKDSIIFFDANKCGPQAGENNVFDWRGACHTTDGSDVGVDLTGGYHDAGDHVKFGLPQGYSAAILGWSLYEF 81 (441)
T ss_dssp CCCCHHHHHHHHHHGGGGGBCBTTTTTTCSCTTCCCBCTTTTTTTTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHHHHHcCCCCCCcccCCCCCCCCCccccCCCcccCCCCeeeCCCCCeeccchHHHHHHHHHHHHHh
Confidence 56899999999999999999999886 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCChhHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCccee-EEcCCCCcchHHHHHHHHH
Q 006835 98 GKQMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRA-YKIDPSNPGSDLAGETAAA 176 (629)
Q Consensus 98 ~~~~~~~~~~~dlLde~kwgld~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~-y~~~~~~pgs~~~~~~AAa 176 (629)
++.+++.++++|||||||||+|||||||+++|.||+||||+..||.+|++||+|+++|++ |.|+.++|+|++++++|||
T Consensus 82 ~~~~~~~g~~~d~ldeikwg~D~llk~~~~~~~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~~y~~~~~~p~sd~a~~~AAa 161 (441)
T 1ia6_A 82 KESFDATGNTTKMLQQLKYFTDYFLKSHPNSTTFYYQVGEGNADHTYWGAPEEQTGQRPSLYKADPSSPASDILSETSAA 161 (441)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTCCSTTCEEEEESCHHHHTTCCSCGGGCCSCCCCCEEEBTTBCCHHHHHHHHHH
T ss_pred HHHHhhcCcHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCccccccCChhhCCCCCceeeEeCCCCCccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCCcccHHHHHHHHHHHHhCChhHHHHHhh
Q 006835 177 MAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGK 256 (629)
Q Consensus 177 lA~As~v~k~~d~~~A~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~s~~~De~~wAAaeLy~aTG~~~Yl~~~~~ 256 (629)
||+||||||++||+||++||++||++|+||++||+.+. .+++|+| +++.||++|||+|||++|||++|++++++
T Consensus 162 lAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~~~g~~~-----~~~~Y~s-s~~~DE~~WAAa~Ly~aTgd~~Yl~~a~~ 235 (441)
T 1ia6_A 162 LTLMYLNYKNIDSAYATKCLNAAKELYAMGKANQGVGN-----GQSFYQA-TSFGDDLAWAATWLYTATNDSTYITDAEQ 235 (441)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCSCCC-----CTTTSCC-CCSHHHHHHHHHHHHHHHCCTHHHHHHHH
T ss_pred HHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCC-----CCCCCCC-CCchhHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999999999999999999999999999998643 4689998 89999999999999999999999999987
Q ss_pred cCcCCC---CCC-CCccccCCCcchHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHhhcCCCCccccCCCCceec
Q 006835 257 NGDSMG---GTG-WGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFR 332 (629)
Q Consensus 257 ~~~~~~---~~~-~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~tp~Gl~~~ 332 (629)
+..... ... .....|+||++..|+++||+++. ++ ...++.++..++.+ + .++++||+|+.|.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~--~~----~~~~~~~~~~~~~~----~----~~~~~tp~Gl~~~ 301 (441)
T 1ia6_A 236 FITLGNTMNENKMQDKWTMCWDDMYVPAALRLAQIT--GK----QIYKDAIEFNFNYW----K----TQVTTTPGGLKWL 301 (441)
T ss_dssp HTTC------CGGGCSSCSSSSCCHHHHHHHHHHHH--CC----HHHHHHHHHHHHHH----H----HTSCBCTTSCBCC
T ss_pred HHhhhhhcccccccCCCcCCccchHHHHHHHHHhcc--Cc----HHHHHHHHHHHHHH----H----hhcccCCCCceec
Confidence 653210 000 01246899999999999998763 21 12223333333333 2 3578899999999
Q ss_pred ccCchHhHHHHHHHHHHHHHHHHhhcccccccCCCCCChHHHHHHHHhccccccCCCCCCcceEEeeCCCCCCCcccccc
Q 006835 333 QRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRAS 412 (629)
Q Consensus 333 ~~Wgs~~~~~n~a~l~~~y~~~~~~~~~~l~~~~~~~~~~~y~~~A~~qidYiLG~Np~~~SyV~G~G~n~p~~pHHR~s 412 (629)
..||||+|++|++||+++|++++ ++++|+++|++|||||||+||+++|||||||+|+|++||||++
T Consensus 302 ~~WGs~~~~~~~a~l~~~~~~~~--------------~~~~y~~~A~~qldYiLG~NP~~~SyvvG~G~~~p~~pHHR~s 367 (441)
T 1ia6_A 302 SNWGVLRYAAAESMVMLVYCKQN--------------PDQSLLDLAKKQVDYILGDNPANMSYIIGYGSNWCIHPHHRAA 367 (441)
T ss_dssp CSTTHHHHHHHHHHHHHHHHHHS--------------CCHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCBCHHH
T ss_pred CCcchHHHHHHHHHHHHHHHhhc--------------CHHHHHHHHHHHHHHhcCCCCCCceeEEecCCCCCCCCcChhh
Confidence 99999999999999999999874 4679999999999999999999999999999999999999999
Q ss_pred ccccccCCCCccccCCCccccccCCCCCCCcccceEecCCCCCCCcCcCCCccccccccccCchHHHHHHHHHhccCCC
Q 006835 413 SIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAGHGG 491 (629)
Q Consensus 413 ~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~~~g 491 (629)
+++.. .+++.+.||+++|+|+||||||..|+|+|+|++|++|||||||||+||++||+|...+||
T Consensus 368 ~~~~~--------------~~~~~p~p~~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l~~~~~~ 432 (441)
T 1ia6_A 368 NGYTY--------------ANGDNAKPAKHLLTGALVGGPDQNDKFLDDANQYQYTEVALDYNAGLVGVLAGAIKFFGG 432 (441)
T ss_dssp HCCCC--------------C--CTTSCCSSCCTTCBCCCCCTTSCCCCSTTCHHHHBCCHHHHHHHHHHHHHHHHHTC-
T ss_pred ccCCc--------------cccCCCCCCcccCccceeeCCCCCcCcCcccccccccccchhhhHHHHHHHHHHHHhcCC
Confidence 98521 135678889999999999999999999999999999999999999999999999999987
No 6
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=100.00 E-value=1.2e-112 Score=932.22 Aligned_cols=430 Identities=48% Similarity=0.828 Sum_probs=389.7
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCCCCCCcCcCCCCCCCCCCCcccccccceeecCCCccccccchhHHHHHHHHHHHHHH
Q 006835 20 GHDYGQALSKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGK 99 (629)
Q Consensus 20 ~~~Y~~~l~~sl~ff~~QR~G~lp~~~~~~Wr~~s~l~d~~~~~~DlsGGW~DAGD~~Ky~~~~a~s~~~L~~a~~ef~~ 99 (629)
.++|.++|++||+||++||||.+|++++++||++||+.|+++.++||+|||||||||+||++|+|+++++|+|+++||++
T Consensus 2 ~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~wr~ds~l~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~ 81 (433)
T 1ks8_A 2 AYDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFGFPMAYTATVLAWGLIDFEA 81 (433)
T ss_dssp CCCHHHHHHHHHHHHHHTBCBSCCTTCSCTTCCCBCTTCBCTTCCBCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHTHH
T ss_pred CCcHHHHHHHHHHHHHHHcCCCCCcccCCCcCCcccccCCCcCcccCCCceeECCCCCeeccchHHHHHHHHHHHHHhHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCChhHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHHH
Q 006835 100 QMAASGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAA 179 (629)
Q Consensus 100 ~~~~~~~~~dlLde~kwgld~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA~ 179 (629)
.++++|++||||||||||+|||||||+++|.||+||||+..||.+|++||+|+++|++|+|+..+|+|++++++|||||+
T Consensus 82 ~~~~~~~~~d~ldeikwg~D~llk~~~~~g~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~a~~~AAalA~ 161 (433)
T 1ks8_A 82 GYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAA 161 (433)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHCCBTTBEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHHH
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCcCCcccCCHhhCCCCCceeeccCCCCccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred HhhhcccCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCCcccHHHHHHHHHHHHhCChhHHHHHhhcCc
Q 006835 180 ASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGD 259 (629)
Q Consensus 180 As~v~k~~d~~~A~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~s~~~De~~wAAaeLy~aTG~~~Yl~~~~~~~~ 259 (629)
||||||++||+||++||++||++|+||++||+.|.++++..+++|+| +++.||++|||+|||++|||++|+++++++..
T Consensus 162 as~vfk~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~Y~s-s~~~DE~~WAAa~Ly~aTgd~~Yl~~~~~~~~ 240 (433)
T 1ks8_A 162 ASIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITDARNFYAS-ADYRDELVWAAAWLYRATNDNTYLNTAESLYD 240 (433)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGGGGGTSCC-CCTHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHhccccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcCCCCCCC-CCcccHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998777777899998 99999999999999999999999999988655
Q ss_pred CCCCCCCCccccCCCcchHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHhhcCCCCccccCCCCceecccCchHh
Q 006835 260 SMGGTGWGMTEFGWDVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQ 339 (629)
Q Consensus 260 ~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~tp~Gl~~~~~Wgs~~ 339 (629)
.++...+ ...|+||++..|+++||+++. .+ +.+++.++.++|.++. .+.+||+|+.|...||||+
T Consensus 241 ~~~~~~~-~~~~~Wd~~~~g~~~lla~~~--~~--------~~~~~~~~~~~~~~~~----~~~~tp~Gl~~~~~WGs~~ 305 (433)
T 1ks8_A 241 EFGLQNW-GGGLNWDSKVSGVQVLLAKLT--NK--------QAYKDTVQSYVNYLIN----NQQKTPKGLLYIDMWGTLR 305 (433)
T ss_dssp HTTGGGS-CCCCCSSCCHHHHHHHHHHHH--CC--------HHHHHHHHHHHHHHHH----TSCBCTTSCBCCCSTTHHH
T ss_pred hcCcCcC-cCCcCccchhhHHHHHHhhcc--Ch--------HHHHHHHHHHHHHHHh----cCCcCCCCceeecCCchhH
Confidence 4432222 347999999999999998763 11 2344444555554443 2567899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccCCCCCChHHHHHHHHhccccccCCCCCCcceEEeeCCCCCCCccccccccccccC
Q 006835 340 FVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKV 419 (629)
Q Consensus 340 ~~~n~a~l~~~y~~~~~~~~~~l~~~~~~~~~~~y~~~A~~qidYiLG~Np~~~SyV~G~G~n~p~~pHHR~s~~~~~~~ 419 (629)
|++|.+|++++|+++. .++.+|+++|++|||||||+| ++|||||||+|+|++||||.++++..
T Consensus 306 ~~~n~a~l~~~~~~~~-------------~~~~~y~~~A~~qldYiLG~n--~~SyvvG~G~~~p~~pHHR~s~~~~~-- 368 (433)
T 1ks8_A 306 HAANAAFIMLEAAELG-------------LSASSYRQFAQTQIDYALGDG--GRSFVCGFGSNPPTRPHHRSSSCPPA-- 368 (433)
T ss_dssp HHHHHHHHHHHHHHTT-------------SSHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCSCHHHHCCCT--
T ss_pred HHHHHHHHHHHHHhcC-------------CCHHHHHHHHHHhHhhccCCC--CcceEeccCCCCCCCCcchhhcCCCc--
Confidence 9999999999998751 367899999999999999998 89999999999999999999999642
Q ss_pred CCCccccCCCccccccCCCCCCCcccceEecCCCCCCCcCcCCCccccccccccCchHHHHHHHHHhcc
Q 006835 420 NPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAG 488 (629)
Q Consensus 420 ~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~ 488 (629)
+..|..+ +++.+.|||++|+|+||||||..|+|+|+|++|++|||||||||+||++||+|.+.
T Consensus 369 ---~~~c~~~---~~~~~~pn~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l~~~ 431 (433)
T 1ks8_A 369 ---PATCDWN---TFNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVAL 431 (433)
T ss_dssp ---TSCCSHH---HHTCSSCCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHHT
T ss_pred ---ccccccc---ccCCCCCCCCCCccceecCCCcccCcCcCccccccccccHHhHHHHHHHHHHHHhc
Confidence 3477654 37788999999999999999999999999999999999999999999999999865
No 7
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=100.00 E-value=9.9e-99 Score=856.56 Aligned_cols=418 Identities=18% Similarity=0.226 Sum_probs=360.3
Q ss_pred ccchhhHHHHHHHHHHHHHHhcCC-CCCCCCCcC-cCCCCCCCCC--------CCcccccccceeecCCCccccccchhH
Q 006835 17 ALAGHDYGQALSKSILFFEAQRSG-YLPHNQRVT-WRANSGLNDG--------KASGVDLVGGYYDAGDNVKFGLPMAFT 86 (629)
Q Consensus 17 ~~~~~~Y~~~l~~sl~ff~~QR~G-~lp~~~~~~-Wr~~s~l~d~--------~~~~~DlsGGW~DAGD~~Ky~~~~a~s 86 (629)
..++++|.++|++||+||++|||| .||+.+|+. ||++++|.|+ ++.++||+|||||||||+||++|+|++
T Consensus 123 ~I~~~~Y~~al~~sl~ff~~QRsG~~lp~~~~~~~Wr~~s~h~D~~~~~~~~~~~~~vDl~GGwyDAGD~~Kf~~p~a~t 202 (639)
T 1clc_A 123 KIAMNVYEDAFKTAMLGMYLLRCGTSVSATYNGIHYSHGPCHTNDAYLDYINGQHTKKDSTKGWHDAGDYNKYVVNAGIT 202 (639)
T ss_dssp EECTTTTHHHHHHHHHHHHHTBCSSCEEEEETTEEEEECCCCTTCCBCTTTTSCCCBCCCCCSBCCSSSCCEEHHHHHHH
T ss_pred eechhhhhHHHHHHHHHHHHhcCCCcCccccccCccCCCccccCCccccccCCCCccccCCCcceeCCCCCEeCccHHHH
Confidence 346789999999999999999999 599999998 9888777665 677999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh--------cCChhHHHHHHHHHHHHHHHhcC-CC-CeEEEEeCCCCCCCCCCCCCCCCCCcce
Q 006835 87 VTMMSWSIIEYGKQMAA--------SGELGHAMNAIKWGTDYFIKAHP-QP-NVLYGEVGDGNTDHNCWQRPEDMTTDRR 156 (629)
Q Consensus 87 ~~~L~~a~~ef~~~~~~--------~~~~~dlLde~kwgld~llk~~~-~~-g~~y~~vgd~~~dh~~w~~Pe~~~~~R~ 156 (629)
+++|+|+++||++.|++ +|++||+|||||||+|||||||. ++ |.|||||||+..||. .+||+|+.+|+
T Consensus 203 ~~~L~w~~~~~~~~~~~~~~~ipes~~~~~d~ldeikwg~Dyllk~q~~~~~g~~y~~vgd~~~~~~--~~Pe~~~~~R~ 280 (639)
T 1clc_A 203 VGSMFLAWEHFKDQLEPVALEIPEKNNSIPDFLDELKYEIDWILTMQYPDGSGRVAHKVSTRNFGGF--IMPENEHDERF 280 (639)
T ss_dssp HHHHHHHHHHSHHHHTTCCCSSGGGGSSSCHHHHHHHHHHHHHHTTBCTTSSCCBEEEEECSSCCCS--CCGGGCCSCCE
T ss_pred HHHHHHHHHHhhhhhhccccCCccCCCcHHHHHHHHHHHHHHHHHhccccCCCeEEEEecCCCCCCC--CCchhcCCCce
Confidence 99999999999999976 89999999999999999999976 56 999999999888885 99999999999
Q ss_pred eEEcCCCCcchHHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhcCCC-CCCCCccccccccCCCCcccHHH
Q 006835 157 AYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGK-YDGSITVAQKYYRSISGYNDELL 235 (629)
Q Consensus 157 ~y~~~~~~pgs~~~~~~AAalA~As~v~k~~d~~~A~~~L~~A~~~~~~a~~~~~~-y~~~~~~~~~~Y~s~s~~~De~~ 235 (629)
++. ++|++++++|||||+||||||++||+||++||++||++|+||++||+. |.++....+++|+| +++.||++
T Consensus 281 ~~~-----~~s~~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~y~~~~~~~~g~Y~s-s~~~DEl~ 354 (639)
T 1clc_A 281 FVP-----WSSAATADFVAMTAMAARIFRPYDPQYAEKCINAAKVSYEFLKNNPANVFANQSGFSTGEYAT-VSDADDRL 354 (639)
T ss_dssp EEE-----ECHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTCCSCCCCC-SCSHHHHH
T ss_pred Eec-----CCcHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCccCCCccccccccCC-CCcchHHH
Confidence 886 789999999999999999999999999999999999999999999998 67766677899997 88999999
Q ss_pred HHHHHHHHHhCChhHHHHHhhcCcCCCCCCCCccccCCCcchHHHHHHHH-HHhhcCCCCCchHHHHHHHHHHHHHHHHh
Q 006835 236 WAAAWLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQTLVA-KFLMQGKAGHYAPVFERYQQKAEYFMCSC 314 (629)
Q Consensus 236 wAAaeLy~aTG~~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla-~~~~~~~~~~~~~~~~~~~~~ad~~~~~~ 314 (629)
|||+|||+||||++|+++++++...++.. ....|+||++..++.++|+ +..........+..++.+++.++.+++..
T Consensus 355 WAAawLy~ATgd~~Yl~~a~~~~~~~~~~--~~~~f~Wd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 432 (639)
T 1clc_A 355 WAAAEMWETLGDEEYLRDFENRAAQFSKK--IEADFDWDNVANLGMFTYLLSERPGKNPALVQSIKDSLLSTADSIVRTS 432 (639)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHTCSSS--CCSSCCTTCCHHHHHHHHHHCCCSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhccc--cCCCCCchhhHHHHHHHHHhhhhhccChHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999998865444211 1123599999988887776 21100011112455677888889888643
Q ss_pred hcCCCCccccCCCCceecccCchHhHHHHHHHHHHHHHHHHhhcccccccCCCCCChHHHHHHHHhccccccCCCCCCcc
Q 006835 315 LGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATS 394 (629)
Q Consensus 315 ~~~~~~~~~~tp~Gl~~~~~Wgs~~~~~n~a~l~~~y~~~~~~~~~~l~~~~~~~~~~~y~~~A~~qidYiLG~Np~~~S 394 (629)
.+++++++++ +.+.||||++++|.+|+++++.++. ++.+|+++|++|||||||+||+++|
T Consensus 433 -~~~~~g~~~~-----~~~~WGsn~~~~~~a~~~~~a~~l~--------------~~~~~~~~A~~qidYiLG~NP~~~S 492 (639)
T 1clc_A 433 -QNHGYGRTLG-----TTYYWGCNGTVVRQTMILQVANKIS--------------PNNDYVNAALDAISHVFGRNYYNRS 492 (639)
T ss_dssp -HTSTTCCTTT-----TCCCTTHHHHHHHTHHHHHHHHHHS--------------CCHHHHHHHHHHHHHHHTCSTTCCC
T ss_pred -cCCCCCcccC-----CCCCCchHHHHHHHHHHHHHHHhcC--------------CHHHHHHHHHHHHhhccCCCCCCce
Confidence 4455555553 3467999999999999998876642 4689999999999999999999999
Q ss_pred eEEeeCCCCCCCccccccccccccCCCCccccCCCccccccCCCCCCCcccceEecCCCC-CCCcCcCCCcccccccccc
Q 006835 395 YMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDA-YDNFGDRRDNYEQTEPATY 473 (629)
Q Consensus 395 yV~G~G~n~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~-~d~y~D~~~~y~~NEvaId 473 (629)
||||||.|+|+|||||.+++++ .+++++|+||||||. .|+|.|+|.+|++|||+||
T Consensus 493 yvvG~G~~~p~~pHHR~s~~~~-----------------------~~~~~~GalVGGP~~~~d~y~D~r~~y~~nE~~~~ 549 (639)
T 1clc_A 493 YVTGLGINPPMNPHDRRSGADG-----------------------IWEPWPGYLVGGGWPGPKDWVDIQDSYQTNEIAIN 549 (639)
T ss_dssp SBTTSSSSCCSSCBCHHHHHSS-----------------------CSSCCSSCBCCCCCSSTTCCCCCTTCTTTSBCCHH
T ss_pred EEEecCCCCCCCCcchhhccCC-----------------------CCCCCCeeeecCCCccccccccCcccceecccccc
Confidence 9999999999999999876631 136799999999999 9999999999999999999
Q ss_pred CchHHHHHHHHHhc
Q 006835 474 NNAPILGILARLNA 487 (629)
Q Consensus 474 ~NA~lv~~la~l~~ 487 (629)
|||+|+++++++..
T Consensus 550 ~nA~~v~~la~~~~ 563 (639)
T 1clc_A 550 WNAALIYALAGFVN 563 (639)
T ss_dssp HHHHHHHHHHTTTT
T ss_pred chHHHHHHHHHhhh
Confidence 99999999998764
No 8
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=100.00 E-value=3.9e-99 Score=844.43 Aligned_cols=419 Identities=21% Similarity=0.285 Sum_probs=356.2
Q ss_pred ccchhhHHHHHHHHHHHHHHhcCCC-CCCCCCcCcCCCCC-CCC----CCCcccccccceeecCCCccccccchhHHHHH
Q 006835 17 ALAGHDYGQALSKSILFFEAQRSGY-LPHNQRVTWRANSG-LND----GKASGVDLVGGYYDAGDNVKFGLPMAFTVTMM 90 (629)
Q Consensus 17 ~~~~~~Y~~~l~~sl~ff~~QR~G~-lp~~~~~~Wr~~s~-l~d----~~~~~~DlsGGW~DAGD~~Ky~~~~a~s~~~L 90 (629)
..++++|.++|+++|+||++||||+ ||+.+|++||++++ ++| +.+.++||+|||||||||+||++|+|+++++|
T Consensus 82 ~I~~~~Y~~~l~~sl~ff~~QRsG~~l~~~~~~~wr~~~~h~dd~~~~g~~~~~Dl~GGwyDAGD~~K~~~p~a~t~~~L 161 (537)
T 3gzk_A 82 VIHRRAYRDVLEAMLRFFDYQLCGVVLPEDEAGPWAHGACHTSDAKVFGTERALACPGGWHDAGDYGKYTVPAAKAVADL 161 (537)
T ss_dssp EEETTTTHHHHHHHHHHHHHTBSSSCBCHHHHGGGCBCCCCCSCEEETTSSCEECCCCSBCCSSSCCEEHHHHHHHHHHH
T ss_pred eeCcchHHHHHHHHHHHHHHHhCCCcCCccccCCCCCcccccCcccccCCcCccccccceecCCCcceecccHHHHHHHH
Confidence 3467899999999999999999999 99999999998754 443 45688999999999999999999999999999
Q ss_pred HHHHHHHHHHHh-------hcCC--hhHHHHHHHHHHHHHHHhcC-CCCeEEEEeCCCCCCCCCCCCCCCCCCcceeEEc
Q 006835 91 SWSIIEYGKQMA-------ASGE--LGHAMNAIKWGTDYFIKAHP-QPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKI 160 (629)
Q Consensus 91 ~~a~~ef~~~~~-------~~~~--~~dlLde~kwgld~llk~~~-~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~ 160 (629)
+|+|++|++.|+ ++|+ +||||||||||+|||||||+ ++|.||||||+... +..|.+||+|+++|++|.+
T Consensus 162 ~~a~~~~~~~~~~~~~i~es~~~~~~~d~ldeikwg~D~llk~~~~~~g~~y~~v~~~~w-~g~~~~Pe~~~~~R~~~~~ 240 (537)
T 3gzk_A 162 LLAHEYFPAALAHVRPMRSVHRAPHLPPALEVAREEIAWLLTMQDPATGGVYHKVTTPSF-PPLDTRPEDDDAPLVLSPI 240 (537)
T ss_dssp HHHHHHCHHHHHTCCCSGGGSCSSCCCHHHHHHHHHHHHHHHTBCTTTCCBBSEEECSSC-CCTTCCGGGCCSCEEECCB
T ss_pred HHHHHHhhhhhhhhhccccccCcccHHHHHHHHHHHHHHHHhcccCCCCeEEEEecCCCc-CCCCcCcccCCCcceEeec
Confidence 999999999985 4678 99999999999999999998 56999999997421 1123899999999999874
Q ss_pred CCCCcchHHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhcCCCC-CCCCccccccccCCCCcccHHHHHHH
Q 006835 161 DPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKY-DGSITVAQKYYRSISGYNDELLWAAA 239 (629)
Q Consensus 161 ~~~~pgs~~~~~~AAalA~As~v~k~~d~~~A~~~L~~A~~~~~~a~~~~~~y-~~~~~~~~~~Y~s~s~~~De~~wAAa 239 (629)
++.+++++|||||+||||||++||+||++||++||++|+||++||+.+ .++.....++|++ +++.||++|||+
T Consensus 241 -----~t~~~~~~AAalA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~~~~~~~~~~~~Y~~-~~~~Del~wAA~ 314 (537)
T 3gzk_A 241 -----SYAATATFCAAMAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQPFHNPDGILTGEYGD-AELRDELLWASC 314 (537)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCCCCCCTTCCSCCCCC-SCCHHHHHHHHH
T ss_pred -----CCcHHHHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhcccccccCCcccccCCcCC-CccchHHHHHHH
Confidence 467799999999999999999999999999999999999999999874 5555667899987 899999999999
Q ss_pred HHHHHhCChhHHHHHhhcCcCCCCCCCCccccCCCcchHHHHH--HHHHHhhcCCCCCchHHHHHHHHHHHHHHHHhhcC
Q 006835 240 WLYQASGNQHYLDYLGKNGDSMGGTGWGMTEFGWDVKYPGVQT--LVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGK 317 (629)
Q Consensus 240 eLy~aTG~~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~--lla~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~ 317 (629)
|||++|||.+|+++++++.... .. ..|+||++..++++ |+++... ......+++++.+++.+|.++. ..++
T Consensus 315 ~Ly~aTgd~~Yl~~a~~~~~~~--~~---~~~~Wd~~~~~~~~~ll~~~~~~-~~~~~~~~~~~~~~~~ad~~~~-~~~~ 387 (537)
T 3gzk_A 315 ALLRMTGDSAWARVCEPLLDLD--LP---WELGWADVALYGVMDYLRTPRAA-VSDDVRNKVKSRLLRELDALAA-MAES 387 (537)
T ss_dssp HHHHHHCCGGGHHHHHHHHHSC--CC---CCCSSSCCHHHHHHHHHTSCGGG-SCHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_pred HHHHHhCCHHHHHHHHHhhhcc--CC---CccchHHhHHHHHHHHHhCcccc-CCHHHHHHHHHHHHHHHHHHHH-hccC
Confidence 9999999999999998865421 11 37899999887664 3232211 0111234566778888888853 4455
Q ss_pred CCCccccCCCCceecccCchHhHHHHHHHHHHHHHHHHhhcccccccCCCCCChHHHHHHH-HhccccccCCCCCCcceE
Q 006835 318 GSRNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASAGRDLKCSAGNVAPAELLGFA-KSQVDYILGDNPRATSYM 396 (629)
Q Consensus 318 ~~~~~~~tp~Gl~~~~~Wgs~~~~~n~a~l~~~y~~~~~~~~~~l~~~~~~~~~~~y~~~A-~~qidYiLG~Np~~~SyV 396 (629)
+++++.++++|+ .||||++++|.+|+++++.++. ++.+|+++| ++|||||||+||+++|||
T Consensus 388 ~~~g~~~~~~~~----~WGsn~~~~n~a~~l~~a~~~~--------------~~~~y~~~aa~~qidYiLG~NP~~~SyV 449 (537)
T 3gzk_A 388 HPFGIPMRDDDF----IWGSNMVLLNRAMAFLLAEGVG--------------VLHPAAHTVAQRAADYLFGANPLGQCYV 449 (537)
T ss_dssp STTCCSCCGGGC----CTTHHHHHHHHHHHHHHHGGGT--------------CCCTTHHHHHHHHHHHHBTCSTTCCBCB
T ss_pred CCCceeecCCCC----cccchHHHHHHHHHHHHHhhcc--------------CCHHHHHHHHHHhHHHhcCCCCCCceeE
Confidence 677787777764 5999999999999998887642 346789999 999999999999999999
Q ss_pred EeeCCCCCCCccccccccccccCCCCccccCCCccccccCCCCCCCcccceEecCCCCC----------------CCcCc
Q 006835 397 VGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATWFSSKGSDPNLLVGAVVGGPDAY----------------DNFGD 460 (629)
Q Consensus 397 ~G~G~n~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~~~~~l~GaLVGGPn~~----------------d~y~D 460 (629)
||||+|+|+|||||.+++++ .++++||+||||||.. |+|.|
T Consensus 450 vG~G~~~p~~pHHR~s~~~~-----------------------~~~p~~GalVGGPn~~~~D~~~~~~~~~~~~~d~y~D 506 (537)
T 3gzk_A 450 TGFGQRPVRHPHHRPSVADD-----------------------VDHPVPGMVVGGPNRHLQDEIARAQLAGRPAMEAYID 506 (537)
T ss_dssp BTCSSSCBCSCBCHHHHHHC-----------------------TTSCCTTCBCCCCCTTCCSHHHHHHCTTCCGGGCCCC
T ss_pred ecCCCCCCCCCcchhhhcCC-----------------------CCCCCCCCCccCCCcccccchhhhcccCCCcccCcCC
Confidence 99999999999999988742 2468999999999986 79999
Q ss_pred CCCccccccccccCchHHHHHHHHHhccCC
Q 006835 461 RRDNYEQTEPATYNNAPILGILARLNAGHG 490 (629)
Q Consensus 461 ~~~~y~~NEvaId~NA~lv~~la~l~~~~~ 490 (629)
+|++|++||||||||||||++||+|.+.+|
T Consensus 507 ~~~~y~~nEvai~~NA~lv~~lA~l~~~~g 536 (537)
T 3gzk_A 507 HQDSYSTNEVAVYWNSPAVFVIAALLEARG 536 (537)
T ss_dssp CTTCHHHHBCCHHHHHHHHHHHHHHHSCCC
T ss_pred CCccccccccchHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999877
No 9
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=100.00 E-value=2.6e-96 Score=834.03 Aligned_cols=442 Identities=21% Similarity=0.269 Sum_probs=362.4
Q ss_pred cchhhHHHHHHHHHHHHHHhcCCC---CCCCCCcCcCCCC-CCC--------C--------------CCCccccccccee
Q 006835 18 LAGHDYGQALSKSILFFEAQRSGY---LPHNQRVTWRANS-GLN--------D--------------GKASGVDLVGGYY 71 (629)
Q Consensus 18 ~~~~~Y~~~l~~sl~ff~~QR~G~---lp~~~~~~Wr~~s-~l~--------d--------------~~~~~~DlsGGW~ 71 (629)
.++++|.++|+++|+|||+||||. +|...++.||+++ |.. | |.+.++||+||||
T Consensus 96 I~~~~Y~~~l~~sl~ff~~QRsG~~~~~p~~~~~~w~r~a~h~~~~~~~g~~D~~~~p~~~~~~~~~g~~~~~Dl~GGwy 175 (609)
T 1ut9_A 96 IRKDIYTQMKYDALAFFYHKRSGIPIEMPYAGGEQWTRPAGHIGIEPNKGDTNVPTWPQDDEYAGIPQKNYTKDVTGGWY 175 (609)
T ss_dssp ECTTTTTTHHHHHHHHHHHTBSSSCBCTTTTSSGGGCBCCSSSSCTTCBCSSSEEBCCTTSTTCCSCCCCCEECCCCSBC
T ss_pred eCHHHHHHHHHHHHHHHHHHhcCCcccCcccCCccccccccCccccccccccccccccccccccccCCCCceecCCCCee
Confidence 356799999999999999999996 5655677898764 444 3 3467899999999
Q ss_pred ecCCCccccccchhHHHHHHHHHHHHHHH-------H--------hhcCChhHHHHHHHHHHHHHHHhcCCCC---eEEE
Q 006835 72 DAGDNVKFGLPMAFTVTMMSWSIIEYGKQ-------M--------AASGELGHAMNAIKWGTDYFIKAHPQPN---VLYG 133 (629)
Q Consensus 72 DAGD~~Ky~~~~a~s~~~L~~a~~ef~~~-------~--------~~~~~~~dlLde~kwgld~llk~~~~~g---~~y~ 133 (629)
|||||+||++|+++++++|++.|+.|.+. | +++|+++|||||||||+|||||||..++ .+|.
T Consensus 176 DAGD~~K~~~p~a~t~~~ll~~ye~~~~~~~~~~~~~~~~~~~iPes~n~~~d~ldeikwg~D~llk~q~~~g~~~~~~g 255 (609)
T 1ut9_A 176 DAGDHGKYVVNGGIAVWTLMNMYERAKIRGLDNWGPYRDGGMNIPEQNNGYPDILDEARWEIEFFKKMQVTEKEDPSIAG 255 (609)
T ss_dssp CSSSSCEEHHHHHHHHHHHHHHHHHHHHTTCTTSGGGSTTSSSSTTTTSSSCHHHHHHHHHHHHHHHHBCCTTTCGGGTT
T ss_pred eCCCCCeecCchHHHHHHHHHHHHHhhhccccchhhhccccccCccccCcHHHHHHHHHHHHHHHHHhccCCCCcceEEE
Confidence 99999999999999999998888877642 2 3568899999999999999999998776 7888
Q ss_pred EeCCCCCCCCCC---CCCCCCCCcceeEEcCCCCcchHHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhcC
Q 006835 134 EVGDGNTDHNCW---QRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYR 210 (629)
Q Consensus 134 ~vgd~~~dh~~w---~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA~As~v~k~~d~~~A~~~L~~A~~~~~~a~~~~ 210 (629)
|||++..||.+| .+||+|+++|++. +|+|++++++|||||+||||||++||+||++||++||++|+||++||
T Consensus 256 ~v~~~~~D~~w~g~~~~Pe~~~~~R~~~-----~p~t~~~~~~AAalAaas~vfk~~d~~ya~~~L~~A~~~~~fa~~~~ 330 (609)
T 1ut9_A 256 MVHHKIHDFRWTALGMLPHEDPQPRYLR-----PVSTAATLNFAATLAQSARLWKDYDPTFAADCLEKAEIAWQAALKHP 330 (609)
T ss_dssp CEECEEEESSCCCSSCCGGGCCSBEEEC-----CEEHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHCT
T ss_pred EecCCCCCcccCCCCCChhhCCCceeec-----CCCcHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhCc
Confidence 999888899666 4899999999863 59999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC----ccccccccCCCCcccHHHHHHHHHHHHhCChhHHHHHhhcCc------CCC------C-CCCCccccCC
Q 006835 211 GKYDGSI----TVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGKNGD------SMG------G-TGWGMTEFGW 273 (629)
Q Consensus 211 ~~y~~~~----~~~~~~Y~s~s~~~De~~wAAaeLy~aTG~~~Yl~~~~~~~~------~~~------~-~~~~~~~~~W 273 (629)
+.|.+.+ ...+++|+| +++.||++|||+|||+||||++|+++++++.. .++ + ..+....|+|
T Consensus 331 ~~y~~~~~~~~~~~~~~Y~s-s~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~W 409 (609)
T 1ut9_A 331 DIYAEYTPGSGGPGGGPYND-DYVGDEFYWAACELYVTTGKDEYKNYLMNSPHYLEMPAKMGENGGANGEDNGLWGCFTW 409 (609)
T ss_dssp TCCBCCCCSSSSCBSCCCCB-SCCHHHHHHHHHHHHHHHCCHHHHHHHHTSTTTTCCCSBCC----SSGGGTTCBSSCCS
T ss_pred ccccccccccCccCCCCCCC-CCcccHHHHHHHHHHHHhCCHHHHHHHHHhhhcccchhhhccccccccccccCccccch
Confidence 9987653 245789998 88999999999999999999999999988654 121 0 0112347999
Q ss_pred CcchHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHHHHhhcCCCCcccc-----CCCCceecccCchHhHHHHHHHHH
Q 006835 274 DVKYPGVQTLVAKFLMQGKAGHYAPVFERYQQKAEYFMCSCLGKGSRNVQK-----TPGGLIFRQRWNNMQFVTSASFLA 348 (629)
Q Consensus 274 d~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~-----tp~Gl~~~~~Wgs~~~~~n~a~l~ 348 (629)
|+|..+++++|+.+...-.....+..++.+++.+|.|+|.... +++++++ ||+|| .||||||++|.+|++
T Consensus 410 d~~~~~~~~lla~~~~~l~~~~~~~~~~~~~~~ad~~~~~~~~-~~~g~~~~~~~~t~gg~----~WGs~~~~~n~a~~~ 484 (609)
T 1ut9_A 410 GTTQGLGTITLALVENGLPATDIQKARNNIAKAADRWLENIEE-QGYRLPIKQAEDERGGY----PWGSNSFILNQMIVM 484 (609)
T ss_dssp SCCHHHHHHHHHHSCCSSCHHHHHHHHHHHHHHHHHHHHHHHT-CTTCCSCCCCSSSSCSC----CTTHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHhhcc-CCCCccccccccCCCCc----ccccCHHHHHHHHHH
Confidence 9999999998875421000001235567788899999987543 4455444 56776 599999999999999
Q ss_pred HHHHHHHhhcccccccCCCCCChHHHHHHHHhccccccCCCCCCcceEEeeCCCCCCCccccccccccccC-CCCccccC
Q 006835 349 TVYSDYLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKV-NPSFVSCR 427 (629)
Q Consensus 349 ~~y~~~~~~~~~~l~~~~~~~~~~~y~~~A~~qidYiLG~Np~~~SyV~G~G~n~p~~pHHR~s~~~~~~~-~~~~~~c~ 427 (629)
+++.++. ++.+|+++|++|||||||+||+++|||||||+|+|+|||||+++.+.... +..+..|.
T Consensus 485 ~~a~~~~--------------~~~~y~~~A~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~~s~~~~~~~~~~~~G~l 550 (609)
T 1ut9_A 485 GYAYDFT--------------GDSKYLDGMFDGISYLLGRNAMDQSYVTGYGERPLQNPHDRFWTPQTSKRFPAPPPGII 550 (609)
T ss_dssp HHHHHHH--------------CCTHHHHHHHHHHHHHBTCSTTCCBCBBTCSSSCBCCCBCSSSCTTTCTTSCCCCSSCB
T ss_pred HHHHHhc--------------ChHHHHHHHHHHHHhccCCCCCCceEEEecCCCCCCCCccccccccccccCCCCCCCCC
Confidence 8887764 45789999999999999999999999999999999999999866432111 11346775
Q ss_pred CCccccccCCCCCCCcccceEecCCCCCCCcCcCCCccccccccccCchHHHHHHHHHhcc
Q 006835 428 GGYATWFSSKGSDPNLLVGAVVGGPDAYDNFGDRRDNYEQTEPATYNNAPILGILARLNAG 488 (629)
Q Consensus 428 ~g~~~~~~~~~~~~~~l~GaLVGGPn~~d~y~D~~~~y~~NEvaId~NA~lv~~la~l~~~ 488 (629)
.|. .+...+||++ .|+|||||+..|+|.|+|++|++|||||||||+||++||+|.+.
T Consensus 551 ~Gg---p~~~~~dp~~-~ga~vggp~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~ 607 (609)
T 1ut9_A 551 SGG---PNSRFEDPTI-NAAVKKDTPPQKCFIDHTDSWSTNEITVNWNAPFAWVTAYLDQY 607 (609)
T ss_dssp CCC---CCTTCCSHHH-HHHSCTTCCGGGCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHHH
T ss_pred CCC---CCCCCCCccc-ccccCCCCccccCcCccccccccccceecchHHHHHHHHHHHhh
Confidence 443 3344566666 89999999999999999999999999999999999999999764
No 10
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=9.4e-67 Score=581.40 Aligned_cols=397 Identities=20% Similarity=0.264 Sum_probs=287.6
Q ss_pred cchhhH-HHHHHHHHHHHHHhcCCCC--CCCCCcCcCCCCCCCCCCCcccccccceeec-CCCccccccchhHH------
Q 006835 18 LAGHDY-GQALSKSILFFEAQRSGYL--PHNQRVTWRANSGLNDGKASGVDLVGGYYDA-GDNVKFGLPMAFTV------ 87 (629)
Q Consensus 18 ~~~~~Y-~~~l~~sl~ff~~QR~G~l--p~~~~~~Wr~~s~l~d~~~~~~DlsGGW~DA-GD~~Ky~~~~a~s~------ 87 (629)
.++++| .++++++|+|||+||||.+ +.+.+++|+++ +.++||+|||||| |||+||++|+||++
T Consensus 91 I~~~vy~~~~l~~sl~ff~~QRsG~~~~~~d~~~~~~~~-------~~~~Dl~GGwyDAsGD~~Ky~~~~a~t~~~npqQ 163 (586)
T 3h7l_A 91 VGEHILLNQTLSDVIHYFKSQRCGGVFDQQDRQVPVLNA-------NQTADVHGGWYDASGDVSKYLSHLSYANYLNPQQ 163 (586)
T ss_dssp EETTHHHHHHHHHHHHHHHHTBCCHHHHHHTTSEEETTT-------TEEECCCCSBCSBTTBCCEESCCCGGGSSCCCCC
T ss_pred EccchhhHHHHHHHHHHHHHhcCCCCCCCCCceeeecCC-------CceeecccccccCCCCcceeccchhhhhhcccch
Confidence 466786 8999999999999999974 56778889863 5689999999999 99999999999987
Q ss_pred -HHHHHHHHHHHHHHhhcC-----ChhHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCccee--EE
Q 006835 88 -TMMSWSIIEYGKQMAASG-----ELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRA--YK 159 (629)
Q Consensus 88 -~~L~~a~~ef~~~~~~~~-----~~~dlLde~kwgld~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~--y~ 159 (629)
++|+|+++++.+.+.... +++|||||||||+|||||||+++|.||+||||+ |..+ +++|.+ |.
T Consensus 164 ~~~~~w~ll~~~~~~~~~~~~~~~~~~~lldE~rWg~D~llkm~~~~g~~y~qVgd~------W~~d---~~~R~~~~~~ 234 (586)
T 3h7l_A 164 TPMVVWNILKGLSLLEGSEDIAAFTRTRLIEEALFGADFLVRMQNEKGFFYMTVFDK------WSKD---TAQREICAYE 234 (586)
T ss_dssp HHHHHHHHHHHHHHSTTSSSSCHHHHHHHHHHHHHHHHHHHHTBCTTSCBBCEEECT------TCCC---GGGCEEEEEE
T ss_pred hhHHHHHHHHHHHHhhhhccCcccchHHHHHHHHHHHHHHHhcccCCCeEEEEecCC------CCCC---CCcccccccc
Confidence 588888888887776433 289999999999999999999999999999984 6532 446654 33
Q ss_pred cCCCCc-------chHHHHHHHHHHHHHhhhcccCCHHH-HHHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCCcc
Q 006835 160 IDPSNP-------GSDLAGETAAAMAAASIVFRHSDPAY-SSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYN 231 (629)
Q Consensus 160 ~~~~~p-------gs~~~~~~AAalA~As~v~k~~d~~~-A~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~s~~~ 231 (629)
+....+ .+..++++|||||+|||||+ |++| +++||++|+++|+||++|++.|.++ .+ +++.
T Consensus 235 ~~~~~~~~~y~~~~~~~agl~aAALA~Asrvf~--d~~~~a~~~L~aA~~a~~fa~~~~~~y~~~--------g~-~~~~ 303 (586)
T 3h7l_A 235 TQLGHKFDDYQAGFRQGGGVAIAALAAASRLGV--HGEYDQQKYRNAAENGYWHLKEHNTQYLND--------GE-ENII 303 (586)
T ss_dssp TTTTEEESCCBCCGGGTHHHHHHHHHHHTTSSS--CSSSCHHHHHHHHHHHHHHHHHHHHHHSTT--------SC-CCHH
T ss_pred CCCCCCCcceecCCCCcHHHHHHHHHHHhcccC--CCCcChHHHHHHHHHHHHHHHhcCccccCC--------CC-ccch
Confidence 221111 12446789999999999998 7889 9999999999999999998766432 12 6789
Q ss_pred cHH--HHHHHHHHHHhCChhHHHHHhhcCcCCCCCCC--CccccCCCc-----------chHHH--HHHHHHHhhcCCCC
Q 006835 232 DEL--LWAAAWLYQASGNQHYLDYLGKNGDSMGGTGW--GMTEFGWDV-----------KYPGV--QTLVAKFLMQGKAG 294 (629)
Q Consensus 232 De~--~wAAaeLy~aTG~~~Yl~~~~~~~~~~~~~~~--~~~~~~Wd~-----------~~~g~--~~lla~~~~~~~~~ 294 (629)
||+ +|||+|||++||+.+||++++.+.+.+...-+ ....+.|.. ...++ ..|+-.....++..
T Consensus 304 De~~~~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~~~~~~~~g~~w~~~d~~~r~~~d~a~~gl~~iaLl~l~~~~~d~~ 383 (586)
T 3h7l_A 304 DEYCALLASVELFKATKETRYLEESRLWAQRLVARQMSDEQIQHFWSANQDGSRPYFHAAEAGLPTIALCEYLAIEDDSV 383 (586)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTEECCSSCSSEEBSSSSSSSBCCCTTTTTHHHHHHHHHHHHCCSTT
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccCCccCCCcCCCcccCCcccccccccHHHHHHHHHhhhhcCChH
Confidence 999 99999999999999999998764321110000 012345542 22233 22221111123322
Q ss_pred CchHHHHHHHHHHHHHHHHh-------------h------cCCCCccccCC-CCceecccC-chHhHHHHHHHHHHHHHH
Q 006835 295 HYAPVFERYQQKAEYFMCSC-------------L------GKGSRNVQKTP-GGLIFRQRW-NNMQFVTSASFLATVYSD 353 (629)
Q Consensus 295 ~~~~~~~~~~~~ad~~~~~~-------------~------~~~~~~~~~tp-~Gl~~~~~W-gs~~~~~n~a~l~~~y~~ 353 (629)
..+.+++.+++.++.++... + .+++|++++.+ .| +.| |||++++|.|++++++++
T Consensus 384 ~~~~a~~~i~~~~d~~l~~~~~~~npfg~~~~~~~~~~~~~~~~y~~p~~~~~~----y~WqGsN~~~an~a~~~~~a~~ 459 (586)
T 3h7l_A 384 QTESVKCIVNRACEFEIKISNKVTNPFGYPRQYVKGVNESKRDAFFVAHNNESG----YWWQGENARLGSLATMAYLAQP 459 (586)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHSSCCSSCCCCEEECCTTSCCEEESSCCSSSTTS----SCCCCCHHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhhhhhhhcccccCccccHHHHhhhhccccccccccccCCCCC----CeeeChHHHHHHHHHHHHHHHH
Confidence 34566667777777544311 1 11334444433 23 469 999999999999999887
Q ss_pred HHhhcccccccCCCCCChHHHHHHHHhccccccCCCCCCcceEEeeCCCCCCCccccccccccccCCCCccccCCCcccc
Q 006835 354 YLASAGRDLKCSAGNVAPAELLGFAKSQVDYILGDNPRATSYMVGYGNNYPQRVHHRASSIVSIKVNPSFVSCRGGYATW 433 (629)
Q Consensus 354 ~~~~~~~~l~~~~~~~~~~~y~~~A~~qidYiLG~Np~~~SyV~G~G~n~p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~ 433 (629)
++.+. ....+|+++|++|||||||+||+++|||||||+|+|+ ||.+.. +
T Consensus 460 ~~~~~----------~~~~~y~~~a~~qldyiLG~Np~~~s~v~G~G~~~p~---~r~~~~---------------~--- 508 (586)
T 3h7l_A 460 HIASQ----------EIQQQLSVFAQDALNWIVGLNPYDMCMLDGHGRNNPD---YLPQYG---------------F--- 508 (586)
T ss_dssp GCCCH----------HHHHHHHHHHHHHHHHHBTCSTTCCBCBTTSSSCCCC---SBGGGT---------------B---
T ss_pred hcCCc----------hhHHHHHHHHHHhhhhhccCCCCCCccEEeeCCCCCc---cCcccC---------------C---
Confidence 65210 0138899999999999999999999999999999875 787532 0
Q ss_pred ccCCCCCCCcccceEecCCCCC------------CCcCcCCCccccccccccCchHHHHHHHH
Q 006835 434 FSSKGSDPNLLVGAVVGGPDAY------------DNFGDRRDNYEQTEPATYNNAPILGILAR 484 (629)
Q Consensus 434 ~~~~~~~~~~l~GaLVGGPn~~------------d~y~D~~~~y~~NEvaId~NA~lv~~la~ 484 (629)
+ .+||.|+||||.. ....|...+|.-+|--|=--|=|..+++.
T Consensus 509 -------~-~~pG~i~gG~~~g~~D~~~ia~~~~~~~~~~~~~wrw~eqw~ph~~w~l~a~~~ 563 (586)
T 3h7l_A 509 -------F-NAKGGVCNGITGGFEDEEDIAFNPPAQKDDMLQNWRWGEQWIPHGAWYLLAIMS 563 (586)
T ss_dssp -------C-CCTTCBBCCCEECSSCTTSEESSCTTTTTCTTTTHHHHCBBHHHHHHHHHHHHH
T ss_pred -------C-CCCccccCCCCCCcCChhhHhcCccccccccccCcccHhhccchHHHHHHHHHH
Confidence 1 2899999999864 12335567899899887655555444443
No 11
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=99.69 E-value=1.4e-17 Score=186.20 Aligned_cols=90 Identities=14% Similarity=0.252 Sum_probs=72.6
Q ss_pred CceEEEEEEecccCCCCeeEEEEEEEEEeCCCCcccceEEEEec----CCCCeeee----eecccEEeCCCccccCCC-C
Q 006835 535 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISK----LYGPLWGL----TNLGNAYGFPSWLNNLAA-G 605 (629)
Q Consensus 535 ~~~~~~~~v~~sW~~g~~~~~q~~vtV~N~g~~~i~~w~i~~~~----~~~~~W~~----~~~~~~~t~pswn~~i~~-G 605 (629)
+.|+++|+++++|.+| ||++|+|+|+|+++|++|+|+++- .+.+.||. ++..+++++++||++|+| |
T Consensus 381 ~~~~~~~~~~~~W~~g----~~~~v~v~n~~~~~~~~W~~~~~~~~~~~i~~~wn~~~~~~g~~~~~~~~~~n~~~~~~g 456 (515)
T 3icg_A 381 SAVEVTYAITNSWGSG----ASVNVTIKNNGTTPINGWTLKWTMPINQTITNMWSASFVASGTTLSVTNAGYNGTIAANG 456 (515)
T ss_dssp CCEEEEEEEEEECSSE----EEEEEEEEECSSSCEESCEEEEECCTTEEEEEEESEEEEEETTEEEEEECSTTCEECTTT
T ss_pred CceEEEEEEecCCCCc----cEEEEEEEeCCCCCcCCeEEEEEeCCCCEeeccccceEEecCCeEEEecCccccccCCCC
Confidence 6899999999999999 999999999999999999999662 23446665 334569999999999999 9
Q ss_pred CeEEEEEEecCCCCceeEEEEEe
Q 006835 606 KSLEFVYIHTANAADVSVSAYTL 628 (629)
Q Consensus 606 ~s~~FGfi~~~~~a~~~v~~~~~ 628 (629)
+|++|||++..+..+-.|++|+|
T Consensus 457 ~s~~~gf~~~~~g~~~~p~~~~l 479 (515)
T 3icg_A 457 GTQSFGFNINYSGVLSKPTGFTV 479 (515)
T ss_dssp EEEEEEEEEEECSSCCCCSCCEE
T ss_pred ceEEEEEEEeCCCCCCCCceEEE
Confidence 99999999875433334444443
No 12
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=99.64 E-value=2e-16 Score=139.37 Aligned_cols=90 Identities=14% Similarity=0.252 Sum_probs=72.7
Q ss_pred CceEEEEEEecccCCCCeeEEEEEEEEEeCCCCcccceEEEEec----CCCCeeee----eecccEEeCCCccccCCC-C
Q 006835 535 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISK----LYGPLWGL----TNLGNAYGFPSWLNNLAA-G 605 (629)
Q Consensus 535 ~~~~~~~~v~~sW~~g~~~~~q~~vtV~N~g~~~i~~w~i~~~~----~~~~~W~~----~~~~~~~t~pswn~~i~~-G 605 (629)
..|+++|+++++|.+| ||++|+|+|+|+.+|++|+|+++. .+.+.||. ++..+++++++||+.|+| |
T Consensus 1 ~gc~v~y~v~~~W~~G----f~~~vtVtN~g~~~i~gWtv~~~~p~g~~it~~Wna~~s~sG~~vt~~n~~wN~~la~~G 76 (107)
T 3ndz_E 1 SAVEVTYAITNSWGSG----ASVNVTIKNNGTTPINGWTLKWTMPINQTITNMWSASFVASGTTLSVTNAGYNGTIAANG 76 (107)
T ss_dssp CCEEEEEEEEEECSSE----EEEEEEEEECSSSCEESCEEEEECCTTEEEEEEESEEEEEETTEEEEEECSTTCEECTTT
T ss_pred CccEEEEEEcccCCCC----EEEEEEEEeCCCCcccCcEEEEEcCCCCEEecccceEEEecCCEEEEEECCcccccCCCC
Confidence 3799999999999999 999999999999999999999763 23446665 334569999999999999 9
Q ss_pred CeEEEEEEecCCCCceeEEEEEe
Q 006835 606 KSLEFVYIHTANAADVSVSAYTL 628 (629)
Q Consensus 606 ~s~~FGfi~~~~~a~~~v~~~~~ 628 (629)
+|++|||+...+..+-.|.+|+|
T Consensus 77 ~s~~fGf~g~~~G~~~~P~~~~l 99 (107)
T 3ndz_E 77 GTQSFGFNINYSGVLSKPTGFTV 99 (107)
T ss_dssp EEEEEEEEEEECSSCCCCSCCEE
T ss_pred ccEEEEEEEeCCCCCCCCcEEEE
Confidence 99999999886433344444444
No 13
>1exg_A EXO-1,4-beta-D-glycanase; cellulose binding domain, cellulose degradation; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1exh_A
Probab=99.58 E-value=2.3e-15 Score=133.69 Aligned_cols=78 Identities=14% Similarity=0.280 Sum_probs=66.5
Q ss_pred CceEEEEEEecccCCCCeeEEEEEEEEEeCCCCcccceEEEEec----CCCCeeee----eecccEEeCCCccccCCCCC
Q 006835 535 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISK----LYGPLWGL----TNLGNAYGFPSWLNNLAAGK 606 (629)
Q Consensus 535 ~~~~~~~~v~~sW~~g~~~~~q~~vtV~N~g~~~i~~w~i~~~~----~~~~~W~~----~~~~~~~t~pswn~~i~~G~ 606 (629)
+.|+++|+ +++|.+| ||++|+|+|+++.+|++|+|+++. .+.+.||. ++..+++++++||+.|++|+
T Consensus 6 ~~c~v~y~-~~~W~~G----f~~~vtVtN~g~~~i~gWtv~~~~~~g~~i~~~Wna~~s~sG~~vt~~n~~wN~~la~G~ 80 (110)
T 1exg_A 6 AGCQVLWG-VNQWNTG----FTANVTVKNTSSAPVDGWTLTFSFPSGQQVTQAWSSTVTQSGSAVTVRNAPWNGSIPAGG 80 (110)
T ss_dssp CCEEEECC-EEESSSE----EEEEEEEEECSSSCEESEEEEEECSSSCEEEEEESSEEEEETTEEEEEECSGGGEECSSE
T ss_pred CcEEEEEE-eCCCCCC----EEEEEEEEeCCCCcccceEEEEEcCCCcEEecccceEEEccCCEEEEecccccceeCCCc
Confidence 47999999 9999999 999999999999999999999762 13345665 33456899999999999999
Q ss_pred eEEEEEEecCC
Q 006835 607 SLEFVYIHTAN 617 (629)
Q Consensus 607 s~~FGfi~~~~ 617 (629)
+++|||+...+
T Consensus 81 s~~fGf~~~~~ 91 (110)
T 1exg_A 81 TAQFGFNGSHT 91 (110)
T ss_dssp EEEEEEEEECS
T ss_pred EEEEEEEEeCC
Confidence 99999998754
No 14
>2cwr_A Chitinase; chitin-binding domain, endoglucanase, hyperthermophilic, hydrolase; 1.70A {Pyrococcus furiosus} PDB: 2czn_A
Probab=99.41 E-value=6.6e-13 Score=116.06 Aligned_cols=83 Identities=18% Similarity=0.338 Sum_probs=63.9
Q ss_pred CCCCceEEEEEEecccCCCCeeEEEEEEEEEeCCCCcccceEEEEec----CCCCeeeee----ecccEEeCCCccccCC
Q 006835 532 SSSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISK----LYGPLWGLT----NLGNAYGFPSWLNNLA 603 (629)
Q Consensus 532 p~~~~~~~~~~v~~sW~~g~~~~~q~~vtV~N~g~~~i~~w~i~~~~----~~~~~W~~~----~~~~~~t~pswn~~i~ 603 (629)
|+.+.| +|+ +++|.+| ||++|+|+|++. ++|+|+++. .+.++||.+ +..+++++++||+
T Consensus 7 p~~g~c--~y~-~n~W~~G----f~~~vtVtN~g~---~gWtv~~~~~~g~~it~~Wna~~s~sg~~vt~~n~~wN~--- 73 (103)
T 2cwr_A 7 PVSGSL--EVK-VNDWGSG----AEYDVTLNLDGQ---YDWTVKVKLAPGATVGSFWSANKQEGNGYVIFTPVSWNK--- 73 (103)
T ss_dssp CCCEEE--EEE-EEECSSE----EEEEEEEEESSC---CCCEEEEEECTTCEEEEEESEEEEEETTEEEEEECTTCC---
T ss_pred CCCccE--EEE-ECCCCCc----eEEEEEEeCCCC---CcEEEEEECCCCcEEecccceEEecCCCEEEEEcCCcCC---
Confidence 333567 677 8999999 999999999863 899999662 244567663 3456899999998
Q ss_pred CCCeEEEEEEecCCCCceeEE-EEEe
Q 006835 604 AGKSLEFVYIHTANAADVSVS-AYTL 628 (629)
Q Consensus 604 ~G~s~~FGfi~~~~~a~~~v~-~~~~ 628 (629)
|++++|||+..++..+..+. .|+|
T Consensus 74 -G~s~sfGf~gs~~g~~~~p~~~f~l 98 (103)
T 2cwr_A 74 -GPTATFGFIVNGPQGDKVEEITLEI 98 (103)
T ss_dssp -SSEEEEEEEEECSSSCSEEEEEEEE
T ss_pred -CceeEEEEEEecCCCCCCCcEEEEE
Confidence 99999999998876555555 5665
No 15
>1e5b_A Xylanase D; hydrolase, xylan binding domain, beta-sheet; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1e5c_A 1xbd_A 2xbd_A
Probab=98.68 E-value=2e-09 Score=91.15 Aligned_cols=65 Identities=9% Similarity=0.166 Sum_probs=50.7
Q ss_pred ceEEEEEEecccCCCCeeEEEEEEEEEeCCCCcccceEEEEec----CCCCeeeee--ec--ccEEeCCCccccCCCCCe
Q 006835 536 AIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISK----LYGPLWGLT--NL--GNAYGFPSWLNNLAAGKS 607 (629)
Q Consensus 536 ~~~~~~~v~~sW~~g~~~~~q~~vtV~N~g~~~i~~w~i~~~~----~~~~~W~~~--~~--~~~~t~pswn~~i~~G~s 607 (629)
.|+++|+++++|.+| ||++|+|+| +++|+|+++. .+.+.||.+ .+ .+++++ +|++
T Consensus 2 ~cta~y~v~~~W~~G----f~~~vtVtn-----~~gWtv~~~~~~g~~i~~~Wn~~~s~sg~~vt~~n--------~G~s 64 (87)
T 1e5b_A 2 GCSVTATRAEEWSDG----FNVTYSVSG-----SSAWTVNLALNGSQTIQASWNANVTGSGSTRTVTP--------NGSG 64 (87)
T ss_dssp CCCCBCCBCCCCSSE----EEEEEBCCS-----CSSCCCEEECCTTCCEEEEESBCCEESSSCEECCB--------CSSC
T ss_pred ceEEEEEECccCCCC----EEEEEEEEc-----cCceEEEEEcCCCCEEeeeeceeEecCCCEEEEEC--------CCce
Confidence 689999999999999 999999986 5999999763 244567663 23 345553 8999
Q ss_pred EEEEEEecCC
Q 006835 608 LEFVYIHTAN 617 (629)
Q Consensus 608 ~~FGfi~~~~ 617 (629)
++|||+...+
T Consensus 65 ~sfGf~g~~~ 74 (87)
T 1e5b_A 65 NTFGVTVMKN 74 (87)
T ss_dssp SSEEEEEECS
T ss_pred eEEEEEEecC
Confidence 9999998754
No 16
>1heh_C Endo-1,4-beta-xylanase D; hydrolase(xylan degradation), hydrolase, xylan binding domain, beta-sheet; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1hej_C
Probab=98.55 E-value=1.2e-08 Score=86.46 Aligned_cols=66 Identities=11% Similarity=0.177 Sum_probs=51.7
Q ss_pred CceEEEEEEecccCCCCeeEEEEEEEEEeCCCCcccceEEEEec----CCCCeeeeee--cc--cEEeCCCccccCCCCC
Q 006835 535 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTLKNLKLSISK----LYGPLWGLTN--LG--NAYGFPSWLNNLAAGK 606 (629)
Q Consensus 535 ~~~~~~~~v~~sW~~g~~~~~q~~vtV~N~g~~~i~~w~i~~~~----~~~~~W~~~~--~~--~~~t~pswn~~i~~G~ 606 (629)
+.|+++|+++++|.+| ||++|+|+ + +++|+|.++. .+.+.||.+- ++ ++++ ++|+
T Consensus 2 g~Ctaty~~~n~W~~G----f~a~vtVt--g---~~gWtv~~~~~~gq~vt~~Wna~~s~sg~~vt~~--------~~G~ 64 (88)
T 1heh_C 2 GSCSVSAVRGEEWADR----FNVTYSVS--G---SSSWVVTLGLNGGQSVQSSWNAALTGSSGTVTAR--------PNGS 64 (88)
T ss_dssp CCCCCCCCCCSBCSSE----EEEEEECS--S---CCSCCCEEECCSSCCCCCEESSEEECSSSEEEEE--------CSSS
T ss_pred CceEEEEEEcccCCCc----eEEEEEEe--c---cccEEEEEECCCCCEEEccccccCccCCCEEEEe--------CCCc
Confidence 4799999999999999 99999998 4 3999999762 3556777643 33 3555 3899
Q ss_pred eEEEEEEecCC
Q 006835 607 SLEFVYIHTAN 617 (629)
Q Consensus 607 s~~FGfi~~~~ 617 (629)
+++|||+...+
T Consensus 65 s~sfGf~g~~~ 75 (88)
T 1heh_C 65 GNSFGVTFYKN 75 (88)
T ss_dssp CSEEEEEEECS
T ss_pred eeEEEEEEecC
Confidence 99999998753
No 17
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=96.30 E-value=0.092 Score=55.38 Aligned_cols=142 Identities=9% Similarity=0.015 Sum_probs=80.9
Q ss_pred hHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHh-cCCCCeEEEEeCCCCCCCCCCCCCCCCCCcceeEEcCCC
Q 006835 85 FTVTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKA-HPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPS 163 (629)
Q Consensus 85 ~s~~~L~~a~~ef~~~~~~~~~~~dlLde~kwgld~llk~-~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~~~~ 163 (629)
+.-..|+|++.+ .+...-+-++.++.++-+++||++- ++.+|++|+.+. .| +.|.+. .+.+
T Consensus 53 ~~nar~i~~~a~---a~~~~~~~~~~~~~A~~~~~~l~~~~~~~~Gg~~~~~d---~d----g~~~~~--~~~~------ 114 (388)
T 2gz6_A 53 WLQNRQVWTFSM---LCNQLEKRENWLKIARNGAKFLAQHGRDDEGNWYFALT---RG----GEPLVQ--PYNI------ 114 (388)
T ss_dssp HHHHHHHHHHHH---HHHHTCCCHHHHHHHHHHHHHHHHHSBCTTSCBCSEEC---TT----SCBCCC--CCCH------
T ss_pred HHHHHHHHHHHH---HHHHhcCCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEc---CC----CCcccC--Ccch------
Confidence 344455554432 2332124588999999999999997 556788988873 11 112111 1221
Q ss_pred CcchHHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhcC----CCCCCCCccccccccCCCCcccHHHHHHH
Q 006835 164 NPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYR----GKYDGSITVAQKYYRSISGYNDELLWAAA 239 (629)
Q Consensus 164 ~pgs~~~~~~AAalA~As~v~k~~d~~~A~~~L~~A~~~~~~a~~~~----~~y~~~~~~~~~~Y~s~s~~~De~~wAAa 239 (629)
..-+-++.+|+.++++.. |+ ++|+.|++++++..++- +.+....+.. ..+.+ .+..--++.|.+
T Consensus 115 ----~~~af~i~al~~~y~~tg--~~----~~l~~A~~~~~~i~~~~~d~~g~~~~~~~~~-~~~~~-~~~~~~~~~all 182 (388)
T 2gz6_A 115 ----FSDCFAAMAFSQYALASG--EE----WAKDVAMQAYNNVLRRKDNPKGKYTKTYPGT-RPMKA-LAVPMILANLTL 182 (388)
T ss_dssp ----HHHHHHHHHHHHHHHHHC--CH----HHHHHHHHHHHHHHTC--------------C-CCCEE-THHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHhC--CH----HHHHHHHHHHHHHHHHhcCCCcccCcccCCC-CCCCC-CCHHHHHHHHHH
Confidence 223446677777777765 33 56788888888877652 2221111100 01111 011113567889
Q ss_pred HHHHHhCChhHHHHHhh
Q 006835 240 WLYQASGNQHYLDYLGK 256 (629)
Q Consensus 240 eLy~aTG~~~Yl~~~~~ 256 (629)
.||++|++..|++.+++
T Consensus 183 ~l~~~t~d~~~~~~A~~ 199 (388)
T 2gz6_A 183 EMEWLLPQETLENVLAA 199 (388)
T ss_dssp HTGGGSCHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHH
Confidence 99999999999997755
No 18
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=96.16 E-value=0.14 Score=54.67 Aligned_cols=121 Identities=18% Similarity=0.179 Sum_probs=67.0
Q ss_pred ChhHHHHHHHHHHHHHHHh-cCCC-CeEEEEeCCCCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHHHHhhh
Q 006835 106 ELGHAMNAIKWGTDYFIKA-HPQP-NVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIV 183 (629)
Q Consensus 106 ~~~dlLde~kwgld~llk~-~~~~-g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA~As~v 183 (629)
+.|+.|+.++-+++||++- .+.+ |++|+.+-++ .|.+. .+.+| + .+-+++|++. .
T Consensus 69 g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG--------~~~~~--~~~ly---------d---~Af~i~al~~-~ 125 (402)
T 3gt5_A 69 GTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDD--------RVEDD--TNHCY---------G---LAFVMLAYSC-G 125 (402)
T ss_dssp CCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEEETT--------EEEEC--CEEHH---------H---HHHHHHHHHH-H
T ss_pred CChHHHHHHHHHHHHHHHhCccCCCCcEEEEeeCC--------CCCcC--CcchH---------H---HHHHHHHHHH-H
Confidence 4689999999999999984 4444 7788777331 12111 12222 1 1222233333 2
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHhc---C--CCCCCCCc-cc-cccccCCCCcccH--HHHHHHHHHHHhCChhHHHHH
Q 006835 184 FRHSDPAYSSELLRHAYQLFDFADKY---R--GKYDGSIT-VA-QKYYRSISGYNDE--LLWAAAWLYQASGNQHYLDYL 254 (629)
Q Consensus 184 ~k~~d~~~A~~~L~~A~~~~~~a~~~---~--~~y~~~~~-~~-~~~Y~s~s~~~De--~~wAAaeLy~aTG~~~Yl~~~ 254 (629)
.+..|++ .|+.|++++++..++ + |.|..... .. ...|.+ ..+- ++-|.+.||++||++.|++.+
T Consensus 126 ~~tgd~~----~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~~~---~n~~m~l~eall~L~~~tgd~~~~~~a 198 (402)
T 3gt5_A 126 LKVGIKQ----AREWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYRG---QNANMHMCEAMLAAYEASGEQRYLERA 198 (402)
T ss_dssp HHTTCTT----HHHHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSCEE---HHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHhCChh----HHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCCCCCCCC---CCHHHHHHHHHHHHHHhhCCHHHHHHH
Confidence 2234544 667778888877765 1 22221000 00 001111 1122 456799999999999999987
Q ss_pred hh
Q 006835 255 GK 256 (629)
Q Consensus 255 ~~ 256 (629)
++
T Consensus 199 ~~ 200 (402)
T 3gt5_A 199 LV 200 (402)
T ss_dssp HH
T ss_pred HH
Confidence 55
No 19
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=95.85 E-value=0.12 Score=54.39 Aligned_cols=122 Identities=11% Similarity=0.041 Sum_probs=75.1
Q ss_pred ChhHHHHHHHHHHHHH-HHhcCC--CCeEEEEeCCCCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHHHHhh
Q 006835 106 ELGHAMNAIKWGTDYF-IKAHPQ--PNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASI 182 (629)
Q Consensus 106 ~~~dlLde~kwgld~l-lk~~~~--~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA~As~ 182 (629)
+-+..|+.++-..++| .+-.++ .|+|+-+.. +..|+. +-..+.++.++|..++
T Consensus 109 ~~~~yL~~A~~l~~~l~~~~wd~~~gGGi~W~~~------------------~~~~kn------aisN~~~~~~la~l~~ 164 (349)
T 3k7x_A 109 GKSIYLEDAQLVWQDLVDTGWNDIMGGGFAWRRP------------------QMYYKN------TPVNAPFIILSCWLYN 164 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHTBCSGGGSCBEEETT------------------EEEEEE------HHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHhCCCCCCCCceEecCC------------------Cccccc------hhhHHHHHHHHHHHHH
Confidence 5688899999999998 454433 355544431 123441 2234566777777788
Q ss_pred hcccCCHHHHHHHHHHHHHHHHHHHhc---C-CCCCCCCccccccccCC-CCc---ccHHHHHHHHHHHHhCChhHHHHH
Q 006835 183 VFRHSDPAYSSELLRHAYQLFDFADKY---R-GKYDGSITVAQKYYRSI-SGY---NDELLWAAAWLYQASGNQHYLDYL 254 (629)
Q Consensus 183 v~k~~d~~~A~~~L~~A~~~~~~a~~~---~-~~y~~~~~~~~~~Y~s~-s~~---~De~~wAAaeLy~aTG~~~Yl~~~ 254 (629)
++.+ .++|+.|+++|+|..++ + +.+.++......-+... ..+ .--+++|+++||++||+++||+.+
T Consensus 165 ~tgd------~~Yl~~A~~~~~w~~~~l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a 238 (349)
T 3k7x_A 165 ELNE------TKYLEWAMKTYEWQTKVLVREDGFVEDGINRLEDGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTA 238 (349)
T ss_dssp HHCC------HHHHHHHHHHHHHHHHHHBCTTSCBCCEECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HhCC------HHHHHHHHHHHHHHHhcCCCCCCeEecCCccCCCCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHH
Confidence 7764 47899999999999875 2 22222211100011100 111 124889999999999999999987
Q ss_pred hhc
Q 006835 255 GKN 257 (629)
Q Consensus 255 ~~~ 257 (629)
++.
T Consensus 239 ~~l 241 (349)
T 3k7x_A 239 NKT 241 (349)
T ss_dssp HHH
T ss_pred HHH
Confidence 663
No 20
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=95.77 E-value=0.58 Score=49.13 Aligned_cols=113 Identities=10% Similarity=-0.037 Sum_probs=68.7
Q ss_pred HHHH-HHhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHHHHhhh-cccCCHHHHHHH
Q 006835 118 TDYF-IKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIV-FRHSDPAYSSEL 195 (629)
Q Consensus 118 ld~l-lk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA~As~v-~k~~d~~~A~~~ 195 (629)
+.|. .++++..|+||+++.. |.. ..|. .+..-..+.++.++|.|+++ +++ ..+
T Consensus 21 l~fw~~~~~D~~GGf~~~~~~---d~~--~~~~--------------eK~l~~nar~i~~~a~a~~~~~~~------~~~ 75 (388)
T 2gz6_A 21 LPFWENHSLDSEGGYFTCLDR---QGK--VYDT--------------DKFIWLQNRQVWTFSMLCNQLEKR------ENW 75 (388)
T ss_dssp HHHHHHHCBCTTSSBCCEEBT---TSC--EEEC--------------CEEHHHHHHHHHHHHHHHHHTCCC------HHH
T ss_pred HHHHHhcCCCCCCCEEeEECC---CCC--cCCc--------------chhHHHHHHHHHHHHHHHHHhcCC------HHH
Confidence 3444 5577777788899853 221 1111 12334578899999999998 553 367
Q ss_pred HHHHHHHHHHHHhc-C---CCCCCCC-ccccccccCCCCcc-c--HHHHHHHHHHHHhCChhHHHHHhhc
Q 006835 196 LRHAYQLFDFADKY-R---GKYDGSI-TVAQKYYRSISGYN-D--ELLWAAAWLYQASGNQHYLDYLGKN 257 (629)
Q Consensus 196 L~~A~~~~~~a~~~-~---~~y~~~~-~~~~~~Y~s~s~~~-D--e~~wAAaeLy~aTG~~~Yl~~~~~~ 257 (629)
++.|++..+|..++ . |.+.... ..+... ...... | -+++|.+++|++||++.|++.+++.
T Consensus 76 ~~~A~~~~~~l~~~~~~~~Gg~~~~~d~dg~~~--~~~~~~~~~af~i~al~~~y~~tg~~~~l~~A~~~ 143 (388)
T 2gz6_A 76 LKIARNGAKFLAQHGRDDEGNWYFALTRGGEPL--VQPYNIFSDCFAAMAFSQYALASGEEWAKDVAMQA 143 (388)
T ss_dssp HHHHHHHHHHHHHHSBCTTSCBCSEECTTSCBC--CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcc--cCCcchHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 88899999999886 2 2111100 000000 001111 1 2556888999999999999987653
No 21
>3ghp_A Cellulosomal scaffoldin adaptor protein B; linker segments, beta barrel, alpha helix, beta flaps, structural protein; 2.49A {Acetivibrio cellulolyticus}
Probab=95.38 E-value=0.0053 Score=58.57 Aligned_cols=9 Identities=33% Similarity=0.530 Sum_probs=4.6
Q ss_pred CcceEEeeC
Q 006835 392 ATSYMVGYG 400 (629)
Q Consensus 392 ~~SyV~G~G 400 (629)
|.-=|+||-
T Consensus 118 G~iavIgFK 126 (227)
T 3ghp_A 118 GTLAVVGFK 126 (227)
T ss_dssp EEEEEEEEE
T ss_pred ceeEEEEEE
Confidence 344456664
No 22
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=93.29 E-value=0.96 Score=48.08 Aligned_cols=135 Identities=19% Similarity=0.174 Sum_probs=71.7
Q ss_pred hhHHHHHHHHHHHHHHHh--cCCCCeEEEEeCC-CCCCCCC-CCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHHHHhh
Q 006835 107 LGHAMNAIKWGTDYFIKA--HPQPNVLYGEVGD-GNTDHNC-WQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASI 182 (629)
Q Consensus 107 ~~dlLde~kwgld~llk~--~~~~g~~y~~vgd-~~~dh~~-w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA~As~ 182 (629)
-+..++.++.-++.+++- .++.+.+...+.. ...+..+ ...|.+. -|+ +.+ +||-++ |.+--|-.+++
T Consensus 191 d~~~~~~a~~l~~~~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~--~~~-~~~---~pGH~i--E~awlLl~~~~ 262 (402)
T 3gt5_A 191 EQRYLERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHL--FRP-WGF---QPGHQT--EWAKLLLILDR 262 (402)
T ss_dssp CHHHHHHHHHHHHHHHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCS--SSC-SSB---CHHHHH--HHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhhCccCCeeEEEECCCCCCccccccCCcccc--cCc-CCC---CCChHH--HHHHHHHHHHH
Confidence 367888888888888864 2455665555542 1111000 1112111 122 122 477654 44445555566
Q ss_pred hcccCCHHHHHHHHHHHHHHHHHHHhc------CCCCCCCCccccccccCCCCc--ccHHHHHHHHHHHHhCChhHHHHH
Q 006835 183 VFRHSDPAYSSELLRHAYQLFDFADKY------RGKYDGSITVAQKYYRSISGY--NDELLWAAAWLYQASGNQHYLDYL 254 (629)
Q Consensus 183 v~k~~d~~~A~~~L~~A~~~~~~a~~~------~~~y~~~~~~~~~~Y~s~s~~--~De~~wAAaeLy~aTG~~~Yl~~~ 254 (629)
+.. + .++++.|+++++++.++ .|.+......... -.....+ .-|.+-|++.||+.||++.|++.+
T Consensus 263 ~~~--~----~~~~~~A~~l~~~~~~~gwd~~~Gg~~~~~d~~g~~-~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a 335 (402)
T 3gt5_A 263 YIE--V----EWLVPVARSLFDVAVARSWDAVRGGLCYGFAPDGTI-CDDDKYFWVQAESLAAAALLATRSGDERYWQWY 335 (402)
T ss_dssp HCC--C----TTHHHHHHHHHHHHHHHHBCTTTCSBCSEECTTSCE-EECCEEHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred hhC--c----HHHHHHHHHHHHHHHHhcccCCCCcEEEEEcCCCCe-eeCCcceeHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 543 3 34788888888887654 1211100000000 0000111 247888899999999999999977
Q ss_pred hh
Q 006835 255 GK 256 (629)
Q Consensus 255 ~~ 256 (629)
++
T Consensus 336 ~~ 337 (402)
T 3gt5_A 336 DR 337 (402)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 23
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=93.28 E-value=0.88 Score=47.64 Aligned_cols=67 Identities=22% Similarity=0.306 Sum_probs=45.4
Q ss_pred HHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCCcccHHHH---HHHHHHHHhCCh
Q 006835 172 ETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLW---AAAWLYQASGNQ 248 (629)
Q Consensus 172 ~~AAalA~As~v~k~~d~~~A~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~s~~~De~~w---AAaeLy~aTG~~ 248 (629)
.+-.+|.-++++..+ + ++++.|++...+.....+.+ .. .++.||..| |.+.+|++||++
T Consensus 50 ~~~~~l~d~~~~tgd--~----~y~~~a~~~~~~~~~~~~~~----------~~--~~~~DD~a~~~la~~~aye~t~~~ 111 (349)
T 3k7x_A 50 HLVEVRLDAYLRTKK--Q----ADLEVAEKTYLHNKNRNGGT----------LI--HDFYDDMLWNALAAYRLYKATGKS 111 (349)
T ss_dssp HHHHHHHHHHHHHCC--H----HHHHHHHHHHHHHHHHTTSS----------SC--CSBHHHHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHHHhCC--H----HHHHHHHHHHHHHHhcCCCC----------CC--ccCccHHHHHHHHHHHHHHHHCCc
Confidence 345888888888764 4 56677777777665532111 11 244566555 899999999999
Q ss_pred hHHHHHhh
Q 006835 249 HYLDYLGK 256 (629)
Q Consensus 249 ~Yl~~~~~ 256 (629)
+||+.+++
T Consensus 112 ~yL~~A~~ 119 (349)
T 3k7x_A 112 IYLEDAQL 119 (349)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHH
Confidence 99998765
No 24
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=91.22 E-value=1.2 Score=47.49 Aligned_cols=128 Identities=13% Similarity=0.092 Sum_probs=71.1
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHHHHhhhccc
Q 006835 107 LGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRH 186 (629)
Q Consensus 107 ~~dlLde~kwgld~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA~As~v~k~ 186 (629)
-++.++.+.=..|+|+.-.+..+++... |+.-.+. .+.++ .|| +.....+|+-|++++.
T Consensus 132 ~~~~~~~~~~aA~~L~~r~~~~~g~iqs----------w~~~~~~-~~~~~-iID--------~~mni~~L~~A~~~~g- 190 (397)
T 2zzr_A 132 DVKALEATIKAADKLMERYQEKGGFIQA----------WGELGYK-EHYRL-IID--------CLLNIQLLFFAYEQTG- 190 (397)
T ss_dssp CHHHHHHHHHHHHHHHTTEETTTTEECC----------SSSTTCG-GGCEE-ETT--------HHHHTHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHHHHHhCcCCCEEEe----------cccCCCC-CCCce-eec--------hHhHHHHHHHHHHHhC-
Confidence 4667788888899998754433333322 3211111 12222 343 3446788999999987
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhcCC-CCCCCC--ccccccc--cCCCCcccH---------HHHHHHHHHHHhCChhHHH
Q 006835 187 SDPAYSSELLRHAYQLFDFADKYRG-KYDGSI--TVAQKYY--RSISGYNDE---------LLWAAAWLYQASGNQHYLD 252 (629)
Q Consensus 187 ~d~~~A~~~L~~A~~~~~~a~~~~~-~y~~~~--~~~~~~Y--~s~s~~~De---------~~wAAaeLy~aTG~~~Yl~ 252 (629)
||.|.+...+||....+......+ .|+.-. +..+... ....++.|+ +++|.++||++|+|..||+
T Consensus 191 -d~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~ 269 (397)
T 2zzr_A 191 -DEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQII 269 (397)
T ss_dssp -CHHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred -CHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 577666666666555544422111 121100 0001010 001344454 5778999999999999999
Q ss_pred HHhh
Q 006835 253 YLGK 256 (629)
Q Consensus 253 ~~~~ 256 (629)
.+++
T Consensus 270 ~A~~ 273 (397)
T 2zzr_A 270 LFKG 273 (397)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8765
No 25
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=89.74 E-value=1.2 Score=47.31 Aligned_cols=127 Identities=17% Similarity=0.135 Sum_probs=69.6
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHHHHhhhcccC
Q 006835 108 GHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHS 187 (629)
Q Consensus 108 ~dlLde~kwgld~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA~As~v~k~~ 187 (629)
++.++.+.=..|+|+.-.++.+++.. -|+.-.+.....+ ..|| +.....+|+-|++++.
T Consensus 107 ~~~~~~~~~aA~~L~~r~~~~~g~i~----------sw~~~~~~~~~~~-~iID--------~mmni~~L~~A~~~~g-- 165 (377)
T 2ahf_A 107 ESARKLALDAADVLMRRWRADAGIIQ----------AWGPKGDPENGGR-IIID--------CLLNLPLLLWAGEQTG-- 165 (377)
T ss_dssp HHHHHHHHHHHHHHHTTEETTTTEEC----------CBSSTTCTTTTTE-EEGG--------GGGGHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCeEE----------eccCCCCCCCCce-EEec--------hHHHHHHHHHHHHHhC--
Confidence 56777777788888876544432222 2332111111122 3454 3345788999999986
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCC-CCC----CCCcccccccc--CCCCcccH---------HHHHHHHHHHHhCChhHH
Q 006835 188 DPAYSSELLRHAYQLFDFADKYRG-KYD----GSITVAQKYYR--SISGYNDE---------LLWAAAWLYQASGNQHYL 251 (629)
Q Consensus 188 d~~~A~~~L~~A~~~~~~a~~~~~-~y~----~~~~~~~~~Y~--s~s~~~De---------~~wAAaeLy~aTG~~~Yl 251 (629)
||.|.+...+||+..-+......+ .|+ ++.. +..+. ...++.|+ +++|-++||+.|++..||
T Consensus 166 d~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~t--G~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~yL 243 (377)
T 2ahf_A 166 DPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPEN--GNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLL 243 (377)
T ss_dssp CTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTT--CCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred CHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCC--CCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChHHH
Confidence 566665555555555443321112 111 1111 10100 11344454 577889999999999999
Q ss_pred HHHhhc
Q 006835 252 DYLGKN 257 (629)
Q Consensus 252 ~~~~~~ 257 (629)
+.+++.
T Consensus 244 ~~A~~l 249 (377)
T 2ahf_A 244 ETAKRM 249 (377)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988753
No 26
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=89.53 E-value=2.8 Score=45.35 Aligned_cols=118 Identities=13% Similarity=0.086 Sum_probs=76.2
Q ss_pred cCChhHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHHHHhhh
Q 006835 104 SGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIV 183 (629)
Q Consensus 104 ~~~~~dlLde~kwgld~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA~As~v 183 (629)
..+.+++++.+|=-++.|++.|+++| ++++|=|. |+ .| +-|++++.+|.+|+-+.+.
T Consensus 286 ~~~r~~l~~~~~~~a~~l~~~Q~~~G-~W~~vld~---------~~-------~y------~EsSaTAmfaygllkgvr~ 342 (445)
T 3k11_A 286 YPQRPKVMDYFRAHVRGVTALQSGEG-FWHQLLDC---------ND-------SY------LETSATAIYVYCLAHAINK 342 (445)
T ss_dssp CTTHHHHHHHHHHHHHHHHTTCCTTS-CEESBTTC---------TT-------SC------EEHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCC-chhhccCC---------CC-------CC------CCccHHHHHHHHHHHHHHc
Confidence 35678999999999999999998765 77776431 21 12 3367788899999998874
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHhcC---CCCCC-----CCccccccccCCCCcc-c-----HHHHHHHHHHHHhCCh
Q 006835 184 FRHSDPAYSSELLRHAYQLFDFADKYR---GKYDG-----SITVAQKYYRSISGYN-D-----ELLWAAAWLYQASGNQ 248 (629)
Q Consensus 184 ~k~~d~~~A~~~L~~A~~~~~~a~~~~---~~y~~-----~~~~~~~~Y~s~s~~~-D-----e~~wAAaeLy~aTG~~ 248 (629)
.-.| +++++..|+++|+....+- |.... +......+|.+..-.. | -++||++||++..+..
T Consensus 343 -G~Ld---~~~Y~~~A~ka~~~L~~~i~~dG~l~~v~~gtg~g~d~~~Y~~~p~~~~d~~G~G~fllA~~E~~~l~~~~ 417 (445)
T 3k11_A 343 -GWID---AIAYGPVAQLGWHAVAGKINEEGQVEGTCVGTGMAFDPAFYYYRPVNVYAAHGYGPVLWAGAEMIRLLNTQ 417 (445)
T ss_dssp -TSSC---HHHHHHHHHHHHHHHHTTBCTTSCBCSCBCCCCCCSSHHHHHTCCBCTTCGGGHHHHHHHHHHHHHHHHHS
T ss_pred -CCCC---HHHHHHHHHHHHHHHHHhCCCCCCEeceeeccCCCCCchhhccCcccCCCCccHHHHHHHHHHHHHHhccC
Confidence 2234 3578999999999987652 22111 0000112343322111 2 4999999999985433
No 27
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=89.17 E-value=2 Score=45.36 Aligned_cols=119 Identities=14% Similarity=0.065 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHH-HhcC-CCCeEEEEeCCCCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHHHHhhhc--
Q 006835 109 HAMNAIKWGTDYFI-KAHP-QPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVF-- 184 (629)
Q Consensus 109 dlLde~kwgld~ll-k~~~-~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA~As~v~-- 184 (629)
.+.+|+.-.+.+++ ++.+ ..|+|++.+.. |. .|-. .++ ..-..+.+..++|.|++++
T Consensus 14 ~l~~~~~~~l~~w~~~~~D~~~GGf~~~~~~---dg----~~~~--~~k----------~l~~nar~l~~~a~a~~~~~~ 74 (402)
T 1fp3_A 14 RVGQELDRVMAFWLEHSHDREHGGFFTCLGR---DG----RVYD--DLK----------YVWLQGRQVWMYCRLYRKLER 74 (402)
T ss_dssp HHHHHHHHHHHHHHHHSBCTTTSSBCCCBCT---TS----CBSC--CCE----------EHHHHHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHHhhccCCCCCCCCEeeEECC---CC----CCCC--Ccc----------chhhhHHHHHHHHHHHHHhcc
Confidence 34455566777888 6776 46788888853 22 1221 112 2344778899999999988
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccc-ccccCC---------CCc-cc--HHHHHHHHHHHHhCChhHH
Q 006835 185 RHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQ-KYYRSI---------SGY-ND--ELLWAAAWLYQASGNQHYL 251 (629)
Q Consensus 185 k~~d~~~A~~~L~~A~~~~~~a~~~~~~y~~~~~~~~-~~Y~s~---------s~~-~D--e~~wAAaeLy~aTG~~~Yl 251 (629)
.. + .++|+.|++..+|...+= ++. ..+ ++|.+. ..+ .| -++||.++||++||+..|+
T Consensus 75 ~~-~----~~~l~~A~~~~~fl~~~~--~d~---~gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd~~~~ 144 (402)
T 1fp3_A 75 FH-R----PELLDAAKAGGEFLLRHA--RVA---PPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQ 144 (402)
T ss_dssp GC-C----HHHHHHHHHHHHHHHHHT--BSS---TTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHHH
T ss_pred cC-C----HHHHHHHHHHHHHHHHhc--cCc---CCCCceEEEECCCCCccccccchHHHHHHHHHHHHHHHHhCCHHHH
Confidence 22 3 368889999999998751 110 011 233220 011 11 4678999999999999999
Q ss_pred HHHhh
Q 006835 252 DYLGK 256 (629)
Q Consensus 252 ~~~~~ 256 (629)
+.+.+
T Consensus 145 ~~A~~ 149 (402)
T 1fp3_A 145 SEAVD 149 (402)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87655
No 28
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=86.88 E-value=1.7 Score=45.90 Aligned_cols=85 Identities=19% Similarity=0.108 Sum_probs=50.5
Q ss_pred CcchHHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHH-Hhc------CCCCCC--CCccccccccCCCC---cc
Q 006835 164 NPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFA-DKY------RGKYDG--SITVAQKYYRSISG---YN 231 (629)
Q Consensus 164 ~pgs~~~~~~AAalA~As~v~k~~d~~~A~~~L~~A~~~~~~a-~~~------~~~y~~--~~~~~~~~Y~s~s~---~~ 231 (629)
+||-+ .+.+-.|+.+++++. |+ ++++.|+++++|+ .++ .+.+.. .......++.+... -.
T Consensus 245 ~pgh~--ie~~wlL~~a~~~~~--~~----~~l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~~~~l~d~~~~~W~q 316 (402)
T 1fp3_A 245 NPGHA--LEAGWFLLRHSSRSG--DA----KLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPH 316 (402)
T ss_dssp CHHHH--HHHHHHHHHHHHHTT--CH----HHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHH
T ss_pred CCCcH--HHHHHHHHHHHHHcC--Ch----HHHHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHH
Confidence 36655 345556888899885 44 5677788888887 543 122111 00000111110000 01
Q ss_pred cHHHHHHHHHHHHhCChhHHHHHhh
Q 006835 232 DELLWAAAWLYQASGNQHYLDYLGK 256 (629)
Q Consensus 232 De~~wAAaeLy~aTG~~~Yl~~~~~ 256 (629)
-|.+.|++.||++||+..|++.+++
T Consensus 317 aea~~a~l~ly~~tgd~~yl~~a~~ 341 (402)
T 1fp3_A 317 SEAMIAFLMGYSESGDPALLRLFYQ 341 (402)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 2779999999999999999997765
No 29
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=85.05 E-value=5.9 Score=41.53 Aligned_cols=58 Identities=9% Similarity=0.077 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCccccccccC----CCCcccHHHHHH---HHHHHHhCChhHHHHHhh
Q 006835 193 SELLRHAYQLFDFADKYRGKYDGSITVAQKYYRS----ISGYNDELLWAA---AWLYQASGNQHYLDYLGK 256 (629)
Q Consensus 193 ~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s----~s~~~De~~wAA---aeLy~aTG~~~Yl~~~~~ 256 (629)
.++++.|+++.++...+|.. ..++++.. ...+.|.++++. ++|++.||+++|++.+.+
T Consensus 106 ~~yl~~a~~la~~l~~~~r~------~~G~fw~~~~~~~~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~ 170 (373)
T 1nc5_A 106 ERYVKAAKRLRSLYGTLNRT------SEGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVL 170 (373)
T ss_dssp HHHHHHHHHHHGGGGTSCBC------TTSCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCC------CCCCeeccCCCCCeEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 35778888888887665521 01222211 123678877655 688899999999998765
No 30
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=84.97 E-value=4.6 Score=42.37 Aligned_cols=71 Identities=13% Similarity=0.093 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCCccc--HHHHHHHHHHHHhCC
Q 006835 170 AGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYND--ELLWAAAWLYQASGN 247 (629)
Q Consensus 170 ~~~~AAalA~As~v~k~~d~~~A~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~s~~~D--e~~wAAaeLy~aTG~ 247 (629)
.|-+..+|+.++++.++ .++++.|++..++.....+. + . |.. .. .| .+.++.++||+.||+
T Consensus 43 ~G~~~~gl~~~y~~tgd------~~y~~~a~~~~~~~~~~~g~----l---~--~~~-~~-lDd~~~g~~ll~lY~~Tgd 105 (373)
T 1nc5_A 43 QGVFLCGVLRLWEATGE------KRYFEYAKAYADLLIDDNGN----L---L--FRR-DE-LDAIQAGLILFPLYEQTKD 105 (373)
T ss_dssp HHHHHHHHHHHHHHHCC------HHHHHHHHHHHHHHBCTTCC----B---C--CCT-TC-GGGTGGGGGHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhCC------HHHHHHHHHHHHHHhCCCCc----c---c--CCC-CC-cchHHHHHHHHHHHHHhCC
Confidence 34567778889998864 45666777766665421111 0 0 211 11 22 256789999999999
Q ss_pred hhHHHHHhhc
Q 006835 248 QHYLDYLGKN 257 (629)
Q Consensus 248 ~~Yl~~~~~~ 257 (629)
++|++.+.+.
T Consensus 106 ~~yl~~a~~l 115 (373)
T 1nc5_A 106 ERYVKAAKRL 115 (373)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987653
No 31
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=81.45 E-value=15 Score=38.87 Aligned_cols=138 Identities=17% Similarity=0.064 Sum_probs=71.8
Q ss_pred ChhHHHHHHHHHHHHHHHhcC--CCCeEEEEeCCCCCCCCCCCC-CC---CCCCcce-eEEcCCCCcchHHHHHHHHHHH
Q 006835 106 ELGHAMNAIKWGTDYFIKAHP--QPNVLYGEVGDGNTDHNCWQR-PE---DMTTDRR-AYKIDPSNPGSDLAGETAAAMA 178 (629)
Q Consensus 106 ~~~dlLde~kwgld~llk~~~--~~g~~y~~vgd~~~dh~~w~~-Pe---~~~~~R~-~y~~~~~~pgs~~~~~~AAalA 178 (629)
+-++.++.++--++.+.+... .++.+....-+ .|.. ++ ++...|. .|.+ +||-+ .+.+=.|.
T Consensus 189 gd~~~~~~A~~~~~~~~~~~~~~~~~~l~~~f~~------~~~~~~~~~~dd~~~r~~~~~~---~pgh~--iE~~wlLl 257 (421)
T 2zbl_A 189 HDKKWLDRALRIASVIIHDVARNGDYRVNEHFDS------QWNPIRDYNKDNPAHRFRAYGG---TPGAW--IEWGRLML 257 (421)
T ss_dssp CCTHHHHHHHHHHHHHCCCCCGGGTTCCCCEECT------TSCBCTTTTTTSTTCSSSCSSB---CHHHH--HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCCCchhhhcCC------ccccchhccCCCcccccccCCC---CCChH--HHHHHHHH
Confidence 345677777777888776443 23555444422 2321 11 1112222 1222 36655 34555566
Q ss_pred HHhhhccc-CCHHHHHHHHHHHHHHHHHHHhc-------CCCCCCCCccccccccCCCCc--ccHHHHHHHHHHHHhCCh
Q 006835 179 AASIVFRH-SDPAYSSELLRHAYQLFDFADKY-------RGKYDGSITVAQKYYRSISGY--NDELLWAAAWLYQASGNQ 248 (629)
Q Consensus 179 ~As~v~k~-~d~~~A~~~L~~A~~~~~~a~~~-------~~~y~~~~~~~~~~Y~s~s~~--~De~~wAAaeLy~aTG~~ 248 (629)
.++++... .| +...++++.|+++++++.++ .|.+....... ..-.....+ .-|.+-|++.||+.||++
T Consensus 258 ~~~~~~~~~~~-~~~~~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~~~g-~~~~~~k~~w~~aea~~all~l~~~tgd~ 335 (421)
T 2zbl_A 258 HLHAALEARFE-TPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDG-KPIVRERVRWPIVEAMGTAYALYTLTDDS 335 (421)
T ss_dssp HHHHHHHHTTC-CCCTHHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTTS-CBSCCCEEHHHHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHcccccc-cchHHHHHHHHHHHHHHHHHhcCCCCCCcEEEeecCCC-CccCCCcccHHHHHHHHHHHHHHHHhCCH
Confidence 67776632 23 00116788888888888653 12211100000 000000011 237888999999999999
Q ss_pred hHHHHHhh
Q 006835 249 HYLDYLGK 256 (629)
Q Consensus 249 ~Yl~~~~~ 256 (629)
.|++.+++
T Consensus 336 ~yl~~a~~ 343 (421)
T 2zbl_A 336 QYEEWYQK 343 (421)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987665
No 32
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=81.29 E-value=10 Score=40.86 Aligned_cols=78 Identities=14% Similarity=0.121 Sum_probs=39.6
Q ss_pred HHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCCcccHHHHHH---HHHHHHhCCh
Q 006835 172 ETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAA---AWLYQASGNQ 248 (629)
Q Consensus 172 ~~AAalA~As~v~k~~d~~~A~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~s~~~De~~wAA---aeLy~aTG~~ 248 (629)
-++.+|--++++ ..|+ ++++.|+++.++....-..-.++...-...|.. .-|.|-++-+. +++.+.||+.
T Consensus 149 ~~~~~Li~lY~~--T~d~----~yl~~a~~~ad~L~~~~pRt~~Ggf~h~~~~~~-q~WiD~lyM~~pfla~~~~~tgd~ 221 (445)
T 3k11_A 149 AVCTAMIKLRLK--DESL----PVDGLIQNYFDFIINKEYRLADGTFARNRPQRN-TLWLDDMFMGIPAVAQMSRYDKEA 221 (445)
T ss_dssp HHHHHHHHHHHH--CTTC----CCHHHHHHHHHHHHHTSCBCTTCCBCBCSSSTT-EEETHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHh--cCCH----HHHHHHHHHHHHHHHcCCCCCCCceeecCCCCC-ceEecchhhHHHHHHHHHHHHCCc
Confidence 344444444442 2344 556666666666665411111110000111221 23567765443 6677789999
Q ss_pred h--HHHHHhh
Q 006835 249 H--YLDYLGK 256 (629)
Q Consensus 249 ~--Yl~~~~~ 256 (629)
+ |++.+.+
T Consensus 222 ~~~y~d~A~~ 231 (445)
T 3k11_A 222 KNKYLAEAVK 231 (445)
T ss_dssp HHHHHHHHHH
T ss_pred chHHHHHHHH
Confidence 9 9998765
No 33
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=75.92 E-value=12 Score=39.46 Aligned_cols=112 Identities=12% Similarity=0.078 Sum_probs=64.5
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCC-CCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHHHHhhhccc
Q 006835 108 GHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGN-TDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRH 186 (629)
Q Consensus 108 ~dlLde~kwgld~llk~~~~~g~~y~~vgd~~-~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA~As~v~k~ 186 (629)
++|.+.|+-.++-|+++.+.++.|-.++-++. .|. ....++-|. .|-+..+|..++++.++
T Consensus 25 ~~~~~~l~~~~~~l~~~~~~~~~f~~~~~~~~~~d~--------k~~~~W~Wt----------~G~~~~gl~~~ye~Tgd 86 (382)
T 3pmm_A 25 SELQALIRNVTQNLVNIKDESGQFLLRLDDGRVIDT--------KGWAGWEWT----------HGVGLYGIYQYYQQTGD 86 (382)
T ss_dssp HHHHHHHHHHHHHHHHCCCTTCTTCEECTTSCEECS--------SSTTSCSHH----------HHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhccCccccccccCCccccccC--------CCCcCcccc----------HHHHHHHHHHHHHHHCC
Confidence 45666777778888888777677767765432 111 111223221 34567788888888764
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCCcccHHHHHHHHHHHHhCChhHHHHHhh
Q 006835 187 SDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGK 256 (629)
Q Consensus 187 ~d~~~A~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~s~~~De~~wAAaeLy~aTG~~~Yl~~~~~ 256 (629)
.++++.|++.++......+... .. + .. -.+.+.++||+.||+++|++.+..
T Consensus 87 ------~~y~~~a~~~~~~~~~~~~~~~--------n~-D-~~---~~~~~l~~lY~~Tgd~~Yl~~a~~ 137 (382)
T 3pmm_A 87 ------IEMRDIIDRWFADRFAEGATTK--------NV-N-TM---APFLTLAYRFEETGRMAYLPWLES 137 (382)
T ss_dssp ------HHHHHHHHHHHHHHHHHCCCCC--------CT-T-TT---TTHHHHHHHHHHHCCGGGHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHcCCCCcC--------cc-c-ch---HHHHHHHHHHHHhCCHHHHHHHHH
Confidence 4555555554443322211110 00 0 01 123467999999999999998754
No 34
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=72.76 E-value=11 Score=40.01 Aligned_cols=115 Identities=12% Similarity=-0.006 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHHHHhhhcccCC
Q 006835 109 HAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSD 188 (629)
Q Consensus 109 dlLde~kwgld~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA~As~v~k~~d 188 (629)
-+.+++.--++|.+++.+.. +| +.+.. .|..... .+ +..-+.+.++.++|.|++ +++
T Consensus 12 wl~~~~~~ll~f~~~~~d~~-GF-~~ld~------~g~~~~~--~~----------k~~~~nar~i~~~a~a~~-~g~-- 68 (421)
T 2zbl_A 12 WLEQETDRIFNFGKNAVVPT-GF-GWLGN------KGQIKEE--MG----------THLWITARMLHVYSVAAS-MGR-- 68 (421)
T ss_dssp HHHHHHHHHHHHHGGGEETT-EE-CCBCT------TSCBCGG--GC----------EEHHHHHHHHHHHHHHHH-TTC--
T ss_pred HHHHHHHHHHHHHHhCcCCC-Cc-ceECC------CCCCCCC--ch----------hhHHHHHHHHHHHHHHHH-cCC--
Confidence 35566777777777877655 55 34432 1221110 01 223457899999999997 653
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccccCC-C-------Cc---ccHHHHHHHHHHHHhCChhHHHHHhh
Q 006835 189 PAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSI-S-------GY---NDELLWAAAWLYQASGNQHYLDYLGK 256 (629)
Q Consensus 189 ~~~A~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~-s-------~~---~De~~wAAaeLy~aTG~~~Yl~~~~~ 256 (629)
+ ++++.|++..+|..++ .++. ..+++|.+. . .+ .-.+++|.++ |++||+..|++.+++
T Consensus 69 ~----~~l~~A~~~~~fl~~~--~~D~---~~GG~~~s~d~dg~~~~~k~lyd~Af~i~al~~-~~~tg~~~~l~~a~~ 137 (421)
T 2zbl_A 69 P----GAYDLVDHGIKAMNGA--LRDK---KYGGWYACVNDQGVVDASKQGYQHFFALLGAAS-AVTTGHPEARKLLDY 137 (421)
T ss_dssp T----THHHHHHHHHHHHTTT--TBCT---TTSSBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHTTTCTTHHHHHHH
T ss_pred h----hHHHHHHHHHHHHHHh--ccCc---CCCeEEEEeCCCCCcCCchhHHHHHHHHHHHHH-HHHhCCccHHHHHHH
Confidence 3 4788899999998876 2321 112444221 0 11 1267789999 999999999987754
No 35
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=69.59 E-value=14 Score=38.96 Aligned_cols=139 Identities=11% Similarity=0.003 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHhcC-CCCeEEEEeC----CCCCCCCCCCCCCCCCCcceeEEcC
Q 006835 87 VTMMSWSIIEYGKQMAASGELGHAMNAIKWGTDYFIKAHP-QPNVLYGEVG----DGNTDHNCWQRPEDMTTDRRAYKID 161 (629)
Q Consensus 87 ~~~L~~a~~ef~~~~~~~~~~~dlLde~kwgld~llk~~~-~~g~~y~~vg----d~~~dh~~w~~Pe~~~~~R~~y~~~ 161 (629)
+..|+|+...+ +-++.+++++-.++++++-+. ++|.+||.+- +|..-| .|..+.-.++..++
T Consensus 154 i~~L~~A~~~~--------gd~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~-~~t~qG~~dds~Wa---- 220 (377)
T 2ahf_A 154 LPLLLWAGEQT--------GDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIR-GGTHQGNTDGSTWT---- 220 (377)
T ss_dssp HHHHHHHHHHH--------CCTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEE-EECSSSSSTTSCBH----
T ss_pred HHHHHHHHHHh--------CCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeee-CCCcCCcCCcchhH----
Confidence 66777766543 357899999999999999874 5688888875 322111 01111111111111
Q ss_pred CCCcchHHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhc-CC--C-CCC-CCccccccccCCCCccc----
Q 006835 162 PSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKY-RG--K-YDG-SITVAQKYYRSISGYND---- 232 (629)
Q Consensus 162 ~~~pgs~~~~~~AAalA~As~v~k~~d~~~A~~~L~~A~~~~~~a~~~-~~--~-y~~-~~~~~~~~Y~s~s~~~D---- 232 (629)
---|-++-+++...+.-+ | .++|+.|+++-++..++ |. . |-+ ..+... ....|
T Consensus 221 ------RGqAw~i~gl~~ly~~T~--d----~~yL~~A~~la~~~l~~~~~d~~pywd~~~~~~~------~~~~d~Sa~ 282 (377)
T 2ahf_A 221 ------RGQAWGIYGFALNSRYLG--N----ADLLETAKRMARHFLARVPEDGVVYWDFEVPQEP------SSYRDSSAS 282 (377)
T ss_dssp ------HHHHHHHHHHHHHHHHHT--C----HHHHHHHHHHHHHHHTTCCTTSSCBSBTTSCCCT------TSCBCHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHC--C----hHHHHHHHHHHHHHHHhhHHhCCcccccCCCccC------CCccCCCHH
Confidence 112234455555556543 3 56789999998888876 21 1 211 101000 11223
Q ss_pred -HHHHHHHHHHHHhC-----ChhHHHHHhh
Q 006835 233 -ELLWAAAWLYQASG-----NQHYLDYLGK 256 (629)
Q Consensus 233 -e~~wAAaeLy~aTG-----~~~Yl~~~~~ 256 (629)
-.+.+-++|.+.|+ ++.|++.+++
T Consensus 283 aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~ 312 (377)
T 2ahf_A 283 AITACGLLEIASQLDESDPERQRFIDAAKT 312 (377)
T ss_dssp HHHHHHHHHHHHTSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccccchHHHHHHHHH
Confidence 23455577888886 5678877654
No 36
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=66.40 E-value=47 Score=34.23 Aligned_cols=85 Identities=12% Similarity=0.068 Sum_probs=52.8
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHHHHhhh---
Q 006835 107 LGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIV--- 183 (629)
Q Consensus 107 ~~dlLde~kwgld~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA~As~v--- 183 (629)
-+...+.++=|++|||.||-.+|+. .|+ -|+....-..+=.. =|+++.+.-.|+....-
T Consensus 92 ~~~y~~Ai~Rgl~wlL~mQ~~nGGW-pqF-----------dpd~~~Yl~~IpFn------DDvtarvLelL~~~~~~~~~ 153 (332)
T 1gxm_A 92 NTKYRDAVRKAANFLVNSQYSTGAL-PQF-----------YPLKGGYSDHATFN------DNGMAYALTVLDFAANKRAP 153 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHCCTTSCC-BSE-----------ESCCSGGGGSEECG------GGHHHHHHHHHHHHHTTCTT
T ss_pred chHHHHHHHHHHHHHHhccCCCCCc-ccc-----------CCCcccccccCCcc------hHHHHHHHHHHHHHHhccCC
Confidence 3678889999999999999877632 011 02211001111111 17888888888887542
Q ss_pred cc---cCCHHHHHHHHHHHHHHHHHHHhcC
Q 006835 184 FR---HSDPAYSSELLRHAYQLFDFADKYR 210 (629)
Q Consensus 184 ~k---~~d~~~A~~~L~~A~~~~~~a~~~~ 210 (629)
|. -.|.+. .+...+.+++-+|..+.+
T Consensus 154 ~~~~~~~~~~~-~~~~~av~Rgid~Llk~Q 182 (332)
T 1gxm_A 154 FDTDVFSDNDR-TRFKTAVTKGTDYILKAQ 182 (332)
T ss_dssp SCSTTSCHHHH-HHHHHHHHHHHHHHHHHS
T ss_pred ccccccccchh-hhhHHHHHHHHHHHHHhh
Confidence 21 124555 777888888888888865
No 37
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=62.76 E-value=24 Score=37.02 Aligned_cols=115 Identities=10% Similarity=0.026 Sum_probs=73.5
Q ss_pred cccceeecCCCccc--cccchhHHHHHHHHHHHHHHHHhh------cCChhHHHHHHHHHHHHHHHhcCCCCeEEEEeCC
Q 006835 66 LVGGYYDAGDNVKF--GLPMAFTVTMMSWSIIEYGKQMAA------SGELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGD 137 (629)
Q Consensus 66 lsGGW~DAGD~~Ky--~~~~a~s~~~L~~a~~ef~~~~~~------~~~~~dlLde~kwgld~llk~~~~~g~~y~~vgd 137 (629)
-+|=||.+=|+.+. ..+..++-. ..|...-+.+.++. ..+.+++++.++=-+++|++.|+++| +++++=|
T Consensus 210 ~tGl~~h~~~~~~~~~~~~~~WaRG-~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a~~~~~~q~~~G-~W~~~~d 287 (382)
T 3pmm_A 210 ETGLWFHGWNYEGRHNFARARWARG-NSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQIAALAECQDDSG-LWHTLLD 287 (382)
T ss_dssp TTSCBCSEEETTTTBCTTCCCBHHH-HHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHCCTTS-CEESBTT
T ss_pred CCCCeeeeccCCCCCCCCcceeccc-ccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHcCCCCC-ChhhccC
Confidence 35777766665543 223444422 23444444444432 12467899999999999999998765 6666643
Q ss_pred CCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhc
Q 006835 138 GNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKY 209 (629)
Q Consensus 138 ~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA~As~v~k~~d~~~A~~~L~~A~~~~~~a~~~ 209 (629)
.|+ .| +-|++++.+|.+|+-+.|. .-.+ ++++..|+++|+-..++
T Consensus 288 ---------~~~-------~y------~EsSatA~~ay~ll~~~~~-g~l~----~~Y~~~a~ka~~~l~~~ 332 (382)
T 3pmm_A 288 ---------DPH-------SY------LEASATAGFAYGILKAVRK-RYVG----QHYAGVAEKAIRGIVQN 332 (382)
T ss_dssp ---------CTT-------SC------EEHHHHHHHHHHHHHHHHT-TSSC----GGGHHHHHHHHHHHHHT
T ss_pred ---------CCC-------CC------ccccHHHHHHHHHHHHHHc-CCCc----HHHHHHHHHHHHHHHhh
Confidence 122 12 2367788899999998882 1123 36899999999998876
No 38
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=61.45 E-value=7 Score=42.84 Aligned_cols=16 Identities=13% Similarity=0.104 Sum_probs=9.9
Q ss_pred hHHHHHHHHHHHHHHH
Q 006835 108 GHAMNAIKWGTDYFIK 123 (629)
Q Consensus 108 ~dlLde~kwgld~llk 123 (629)
++.|+.++--+||+.+
T Consensus 82 ~~~l~~~d~vv~~a~~ 97 (515)
T 3icg_A 82 QTWMKRVEEIANYAFD 97 (515)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4456666666666666
No 39
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=60.25 E-value=50 Score=34.84 Aligned_cols=114 Identities=18% Similarity=0.135 Sum_probs=67.6
Q ss_pred CChhHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHHHHhhhc
Q 006835 105 GELGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVF 184 (629)
Q Consensus 105 ~~~~dlLde~kwgld~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA~As~v~ 184 (629)
-+.+++++.|+=.++|+++.+..+| .|-.......++.+..+ -| +.-++-++..+++++
T Consensus 247 ~~~~~~~~~i~~~l~~l~~~~~~~g--------------~wp~~~~~~~~~~~~wC----hG---~~Gi~~~l~~~~~~~ 305 (411)
T 3e6u_A 247 VSQGKLHSLVKPSVDYVCQLKFPSG--------------NYPPCIGDNRDLLVHWC----HG---APGVIYMLIQAYKVF 305 (411)
T ss_dssp CCHHHHHHTHHHHHHHHHHTCCTTS--------------CCCSBTTCCCCCCCSSS----SS---HHHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHHHHHhhccCC--------------CCCCCCCcccCcccccc----CC---cHHHHHHHHHHHHHc
Confidence 3467888999999999999864332 23111011112222222 12 223566677778887
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHH--hcCCCCCCCCccccccccCCCCcccHHHHHHHHHHHHhCChhHHHHHhh
Q 006835 185 RHSDPAYSSELLRHAYQLFDFAD--KYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYLDYLGK 256 (629)
Q Consensus 185 k~~d~~~A~~~L~~A~~~~~~a~--~~~~~y~~~~~~~~~~Y~s~s~~~De~~wAAaeLy~aTG~~~Yl~~~~~ 256 (629)
. |+++-+.+.+.++..|.... +.++..+ |. + =..+.-..||+.|+++.|++.+.+
T Consensus 306 ~--~~~~~~~a~~~~~~~~~~g~~~~~~~lCh-------G~----a----G~~~~ll~~~~~t~~~~~~~~A~~ 362 (411)
T 3e6u_A 306 R--EEKYLCDAYQCADVIWQYGLLKKGYGLCH-------GS----A----GNAYAFLTLYNLTQDMKYLYRACK 362 (411)
T ss_dssp C--CHHHHHHHHHHHHHHHHHCSBTTCSCSTT-------SH----H----HHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHHHHHhcCccCCCCceec-------Ch----H----HHHHHHHHHHHHhCCHHHHHHHHH
Confidence 5 67787777777777776421 1111111 11 1 136677889999999999997765
No 40
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=60.11 E-value=76 Score=32.67 Aligned_cols=29 Identities=28% Similarity=0.250 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCeEEEEeC
Q 006835 108 GHAMNAIKWGTDYFIKAHPQPNVLYGEVG 136 (629)
Q Consensus 108 ~dlLde~kwgld~llk~~~~~g~~y~~vg 136 (629)
++....++=|+|||+|.|..+|+-+.+=|
T Consensus 165 ~~~~~av~Rgid~Llk~Qe~dggw~g~Wg 193 (332)
T 1gxm_A 165 TRFKTAVTKGTDYILKAQWKQNGVLTVWC 193 (332)
T ss_dssp HHHHHHHHHHHHHHHHHSCEETTEECCCC
T ss_pred hhhHHHHHHHHHHHHHhhCccCCCcCeec
Confidence 67778899999999999988776554444
No 41
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=57.76 E-value=1.5e+02 Score=33.95 Aligned_cols=92 Identities=8% Similarity=-0.004 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHHHHhhhcccCCHH
Q 006835 111 MNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSDPA 190 (629)
Q Consensus 111 Lde~kwgld~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA~As~v~k~~d~~ 190 (629)
.+.++=+++||++||.++|++-.--.+.......+..|.+.- .+. .+ +.+..+.|+.+..+|+.....+..+..
T Consensus 480 ~~~i~~av~wLls~Q~~DGgw~a~~~~~~~~~l~~i~~~e~f-g~~--~~--d~s~v~~Ta~vL~aL~~~~~~~~~~~~- 553 (732)
T 1w6k_A 480 RERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVF-GDI--MI--DYTYVECTSAVMQALKYFHKRFPEHRA- 553 (732)
T ss_dssp HHHHHHHHHHHHTTCCTTSCBCSSSCCCSCGGGGGGCCCSSC-SSC--SS--CCCBHHHHHHHHHHHHHHHHHCTTSSH-
T ss_pred HHHHHHHHHHHHHhcCCCCCEEeecCCCchHHHhhCcchhcc-ccc--cc--CCCcchHHHHHHHHHHHhccccccccc-
Confidence 345778899999999998876210010000000012222210 010 11 123446676666677766555433321
Q ss_pred HHHHHHHHHHHHHHHHHhcC
Q 006835 191 YSSELLRHAYQLFDFADKYR 210 (629)
Q Consensus 191 ~A~~~L~~A~~~~~~a~~~~ 210 (629)
.+.....+++-+|..+++
T Consensus 554 --~~~~~~i~rAv~yL~~~Q 571 (732)
T 1w6k_A 554 --AEIRETLTQGLEFCRRQQ 571 (732)
T ss_dssp --HHHHHHHHHHHHHHHHHS
T ss_pred --hhhHHHHHHHHHHHHhhc
Confidence 222334556667777764
No 42
>2wnx_A Glycoside hydrolase, family 9; cellulose degradation; 1.31A {Clostridium thermocellum} PDB: 2wo4_A 2wob_A
Probab=56.84 E-value=8.7 Score=35.88 Aligned_cols=39 Identities=15% Similarity=0.193 Sum_probs=29.0
Q ss_pred CceEEEEEEecccCCCCeeEEEEEEEEEeCCCCcc--cceEEE
Q 006835 535 GAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTL--KNLKLS 575 (629)
Q Consensus 535 ~~~~~~~~v~~sW~~g~~~~~q~~vtV~N~g~~~i--~~w~i~ 575 (629)
+.+.|.++..+ ... +....+..+.|+|+|+.+| ++++|+
T Consensus 11 ~~l~Vqy~~~~-~~~-~~n~i~~~~~I~N~g~~~i~Ls~lkiR 51 (170)
T 2wnx_A 11 ASISVSYKCGV-KDG-TKNTIRATINIKNTGTTPVNLSDIKVR 51 (170)
T ss_dssp CCEEEEEEECC-CCS-SCCEEEEEEEEEECSSSCEEGGGEEEE
T ss_pred CcEEEEEEeCC-CCC-CCCEEEEEEEEEECCCCceecCcEEEE
Confidence 68899988533 222 2345999999999998876 588887
No 43
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=49.32 E-value=93 Score=33.76 Aligned_cols=94 Identities=18% Similarity=0.148 Sum_probs=58.2
Q ss_pred hHHHHHHHHHHHHHHHhcCCCC--eEEEEe--CCCCCC--------------CCCCC--CCCCCCCcceeEEcCCCCcch
Q 006835 108 GHAMNAIKWGTDYFIKAHPQPN--VLYGEV--GDGNTD--------------HNCWQ--RPEDMTTDRRAYKIDPSNPGS 167 (629)
Q Consensus 108 ~dlLde~kwgld~llk~~~~~g--~~y~~v--gd~~~d--------------h~~w~--~Pe~~~~~R~~y~~~~~~pgs 167 (629)
+..++-++-.+++|..+|..++ +.|.-. .+...| ...|. +|.++. .|+-|.| | |
T Consensus 204 ~~w~~av~~il~~l~~eq~~~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S~fRPSDDa-~~yg~~i----p-S 277 (489)
T 2p0v_A 204 DEWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIASAFRPSDDA-TTFQFLV----P-S 277 (489)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSCSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCCCCSBCTTSCB-CSSSEEH----H-H
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCCceEeecCCCcccccccCCCCCccCCCCceeCCCCCCCcc-hhcCcch----H-H
Confidence 3555788999999999887654 333221 111011 22343 465554 3444543 3 2
Q ss_pred HHHHHHHHHHHHHhhhcccC--CHHHHHHHHHHHHHHHHHHHhc
Q 006835 168 DLAGETAAAMAAASIVFRHS--DPAYSSELLRHAYQLFDFADKY 209 (629)
Q Consensus 168 ~~~~~~AAalA~As~v~k~~--d~~~A~~~L~~A~~~~~~a~~~ 209 (629)
.+.+.++|-.++.+.+.+ |.++|++|.+.|+++-+--.+|
T Consensus 278 --N~~a~v~L~~aaeia~~v~~d~~la~~~~~lA~eI~~gI~~~ 319 (489)
T 2p0v_A 278 --NFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKALKKY 319 (489)
T ss_dssp --HHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHh
Confidence 345677788888777654 6789999999999987766554
No 44
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=49.14 E-value=81 Score=33.43 Aligned_cols=86 Identities=14% Similarity=0.099 Sum_probs=57.4
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHHHHhhh---
Q 006835 107 LGHAMNAIKWGTDYFIKAHPQPNVLYGEVGDGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIV--- 183 (629)
Q Consensus 107 ~~dlLde~kwgld~llk~~~~~g~~y~~vgd~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA~As~v--- 183 (629)
-+...+-++=|++|||.||..+|+. .|+ -|+....-.. |.- .=|+++.+.-.|+....-
T Consensus 170 ~~~y~~Ai~Rgl~wlL~mQ~~nGGW-pqF-----------dpdn~~y~~~---IpF---nDDvt~rvle~L~~~~~~~~~ 231 (408)
T 1r76_A 170 AAPYRDAALKGIEYLLASQFPNGGW-PQV-----------WPLEGGYHDA---ITY---NDDALVHVAELLSDIAAGRDG 231 (408)
T ss_dssp CHHHHHHHHHHHHHHHHHSCTTSCC-BSB-----------SSCCCGGGGS---EEC---GGGHHHHHHHHHHHHHHTCTT
T ss_pred cHHHHHHHHHHHHHHHHccCCCCCC-cCc-----------CccccccccC---CCc---CcHHHHHHHHHHHHHHhccCc
Confidence 4678899999999999999877632 111 1222111111 111 117888888888777652
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHhcC
Q 006835 184 FRHSDPAYSSELLRHAYQLFDFADKYR 210 (629)
Q Consensus 184 ~k~~d~~~A~~~L~~A~~~~~~a~~~~ 210 (629)
|.-.|+++..+...+.+++-+|..+.+
T Consensus 232 ~~~~~~~~~~~~~~av~Rgi~~Ll~~Q 258 (408)
T 1r76_A 232 FGFVPPAIRTRALEATNAAIHCIVETQ 258 (408)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ccccchhhhhhHHHHHHHHHHHHHHhh
Confidence 333578888899999999999998875
No 45
>1ifr_A Lamin A/C; immunoglobulin, immune system; 1.40A {Homo sapiens} SCOP: b.1.16.1 PDB: 1ivt_A 3gef_A
Probab=47.20 E-value=25 Score=30.91 Aligned_cols=43 Identities=23% Similarity=0.316 Sum_probs=30.0
Q ss_pred EEEEeCCCCc--ccceEEEEecCCCCeeeeee-cccEEeCCCccccCCCCCeEEE
Q 006835 559 TIVTNKSAKT--LKNLKLSISKLYGPLWGLTN-LGNAYGFPSWLNNLAAGKSLEF 610 (629)
Q Consensus 559 vtV~N~g~~~--i~~w~i~~~~~~~~~W~~~~-~~~~~t~pswn~~i~~G~s~~F 610 (629)
|.|.|++.+. |.+|+|.-.- ++ ...+|++|.- -.|+||++++.
T Consensus 21 V~l~N~s~~~~~L~gW~l~r~v--------~~~~~~~y~Fp~~-~~L~pg~~vtI 66 (121)
T 1ifr_A 21 VRLRNKSNEDQSMGNWQIKRQN--------GDDPLLTYRFPPK-FTLKAGQVVTI 66 (121)
T ss_dssp EEEEECSSSCEECTTCEEEEEE--------TTSCCEEEECCSS-CEECTTCEEEE
T ss_pred EEEEeCCCCccccCCCEEEEEc--------CCCccEEEEeCCC-cEECCCCEEEE
Confidence 8889998764 7788887421 11 2368888873 36889998874
No 46
>2lll_A Lamin-B2; immunoglobulin-like fold, structural protein, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=46.30 E-value=23 Score=31.90 Aligned_cols=43 Identities=26% Similarity=0.264 Sum_probs=30.0
Q ss_pred EEEEeCCCCc--ccceEEEEecCCCCeeeeee-cccEEeCCCccccCCCCCeEEE
Q 006835 559 TIVTNKSAKT--LKNLKLSISKLYGPLWGLTN-LGNAYGFPSWLNNLAAGKSLEF 610 (629)
Q Consensus 559 vtV~N~g~~~--i~~w~i~~~~~~~~~W~~~~-~~~~~t~pswn~~i~~G~s~~F 610 (629)
|.|.|++.+. |.+|+|.-.- .+ ...+|++|.- -.|+||++++.
T Consensus 36 V~L~N~s~~~~~L~GW~L~r~v--------~g~~~~~y~Fp~~-~~L~pg~~VtI 81 (139)
T 2lll_A 36 VQLKNNSDKDQSLGNWRIKRQV--------LEGEEIAYKFTPK-YILRAGQMVTV 81 (139)
T ss_dssp EEEEECSSSCEECSSCEEEEEE--------TTSCEEEEECCTT-CEECTTCEEEE
T ss_pred EEEEECCCCccccCCCEEEEec--------CCCccEEEEECCC-cEECCCCEEEE
Confidence 8889998765 7788887421 11 2357888873 36888988874
No 47
>3jt0_A Lamin-B1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, HR5546A, LMNB1_human; 2.39A {Homo sapiens}
Probab=43.33 E-value=25 Score=31.92 Aligned_cols=43 Identities=19% Similarity=0.309 Sum_probs=29.5
Q ss_pred EEEEeCCCCc--ccceEEEEecCCCCeeeeeecccEEeCCCccccCCCCCeEEE
Q 006835 559 TIVTNKSAKT--LKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEF 610 (629)
Q Consensus 559 vtV~N~g~~~--i~~w~i~~~~~~~~~W~~~~~~~~~t~pswn~~i~~G~s~~F 610 (629)
|.|.|++.+. |.||+|.-.- + +...+|++|.- -.|+||++++.
T Consensus 40 V~L~N~s~~~~~LgGW~L~r~v--~------g~~~~y~FP~~-~~L~pg~~VtV 84 (144)
T 3jt0_A 40 IRLKNTSEQDQPMGGWEMIRKI--G------DTSVSYKYTSR-YVLKAGQTVTI 84 (144)
T ss_dssp EEEEECSSSCEECTTCEEEEEE--T------TEEEEEECCTT-CEECTTCEEEE
T ss_pred EEEEECCCCceecCCcEEEEEe--C------CCceEEEcCCC-cEECCCCEEEE
Confidence 8889998765 7899987331 1 11235888863 36899998875
No 48
>1ufg_A Lamin A, nuclear lamin; immunoglobulin like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: b.1.16.1
Probab=42.59 E-value=30 Score=31.58 Aligned_cols=43 Identities=23% Similarity=0.291 Sum_probs=29.8
Q ss_pred EEEEeCCCCc--ccceEEEEecCCCCeeeeee-cccEEeCCCccccCCCCCeEEE
Q 006835 559 TIVTNKSAKT--LKNLKLSISKLYGPLWGLTN-LGNAYGFPSWLNNLAAGKSLEF 610 (629)
Q Consensus 559 vtV~N~g~~~--i~~w~i~~~~~~~~~W~~~~-~~~~~t~pswn~~i~~G~s~~F 610 (629)
|.|.|++.+. |.+|+|.-. +++ ...+|++|.- -.|.||++++.
T Consensus 52 V~L~N~s~~~~~L~GW~L~r~--------vdg~~~~~y~Fp~~-~~L~pg~tVtI 97 (151)
T 1ufg_A 52 VRLRNKSNEDQSMGNWQIRRQ--------NGDDPLMTYRFPPK-FTLKAGQVVTI 97 (151)
T ss_dssp EEEEECSSSCEECSSCEEEEE--------ETTSCCEEEECCTT-CEECTTCEEEE
T ss_pred EEEEECCCCccccCCCEEEEe--------cCCCccEEEEECCC-cEECCCCEEEE
Confidence 8889998764 778888632 111 2357888873 36888888874
No 49
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=42.42 E-value=1.1e+02 Score=27.38 Aligned_cols=54 Identities=17% Similarity=0.236 Sum_probs=32.3
Q ss_pred CCeeEEEEEEEEEeCCCCccc----ceEEEEecCCCCeeeeeecccEEeCCCccccCCCCCeEE
Q 006835 550 NGKRYYRYSTIVTNKSAKTLK----NLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLE 609 (629)
Q Consensus 550 g~~~~~q~~vtV~N~g~~~i~----~w~i~~~~~~~~~W~~~~~~~~~t~pswn~~i~~G~s~~ 609 (629)
.+.-+|.|.|+|.|.|..++. -|.|+-. .+.+=.+.+.++ + .=+..|.||++++
T Consensus 30 ~~~y~FaY~ItI~N~~~~~vQL~sRhW~ItD~--~G~~~eV~G~GV-V---GeqPvL~PGe~F~ 87 (139)
T 1xq4_A 30 QQQYVFAYTVRITNTGSHPAQVISRHWIITDG--EERVQEVRGLGV-V---GQQPLLAPGETFE 87 (139)
T ss_dssp GTBEEEEEEEEEEECSSSCEEEEEEEEEEECT--TSCEEEEEEESS-S---SCCCEECTTCEEE
T ss_pred CCEEEEEEEEEEEeCCCCCEEEEecEEEEEeC--CCCEEEEECCCe-e---cCCCcCCCCCceE
Confidence 356789999999999986532 4444422 233334444444 1 1246789999443
No 50
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=41.13 E-value=66 Score=33.96 Aligned_cols=127 Identities=6% Similarity=-0.110 Sum_probs=66.5
Q ss_pred ChhHHHHHHHHHHHHHHHhcC-CCCeEEEEeC----CCCCCCCCCCCCCCCCCcceeEEcCCCCcchHHHHHHHHHHHHH
Q 006835 106 ELGHAMNAIKWGTDYFIKAHP-QPNVLYGEVG----DGNTDHNCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAA 180 (629)
Q Consensus 106 ~~~dlLde~kwgld~llk~~~-~~g~~y~~vg----d~~~dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~~~~~AAalA~A 180 (629)
+-|+.+++++=-++++++-+. ++|.+||.+- +|..-| .+..+.-..+..++ ---|-++-+++..
T Consensus 190 gd~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~-~~t~qGy~dds~Wa----------RGqAw~i~gl~~l 258 (397)
T 2zzr_A 190 GDEKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLK-GVTRQGYSDESSWA----------RGQAWGIYGIPLS 258 (397)
T ss_dssp CCHHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEE-EECTTSSSTTSCBH----------HHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCccc-CCcccccCcchhhH----------HHHHHHHHHHHHH
Confidence 357899999988999998774 5688888775 221110 00111100111111 0112233444444
Q ss_pred hhhcccCCHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCccccccccC-----CCCcccH-----HHHHHHHHHHHhCC--
Q 006835 181 SIVFRHSDPAYSSELLRHAYQLFDFADKY-RGKYDGSITVAQKYYRS-----ISGYNDE-----LLWAAAWLYQASGN-- 247 (629)
Q Consensus 181 s~v~k~~d~~~A~~~L~~A~~~~~~a~~~-~~~y~~~~~~~~~~Y~s-----~s~~~De-----~~wAAaeLy~aTG~-- 247 (629)
++.=+ | .++|+.|+++.++..++ |. + ..++|.. .....|. .+.+-++|.+.|++
T Consensus 259 Y~~T~--d----~~yL~~A~~la~~~l~~~~~---d----~~pywdt~~~~~~~~~~D~Sa~aiaA~~Ll~L~~~~~~~~ 325 (397)
T 2zzr_A 259 YRKMK--D----YQQIILFKGMTNYFLNRLPE---D----KVSYWDLIFTDGSGQPRDTSATATAVCGIHEMLKYLPEVD 325 (397)
T ss_dssp HHHHC--C----HHHHHHHHHHHHHHHHTCCT---T----SCCBSBTTCCTTSCCCBCHHHHHHHHHHHHHHHTTSCTTC
T ss_pred HHHHC--C----HHHHHHHHHHHHHHHHhhHH---h----CCccccCCCCCCCCCcCCCCHHHHHHHHHHHHHHhcCccc
Confidence 44332 3 56889999999988886 31 0 0112210 0122332 23344667777886
Q ss_pred -hh--HHHHHhh
Q 006835 248 -QH--YLDYLGK 256 (629)
Q Consensus 248 -~~--Yl~~~~~ 256 (629)
.+ |++.+++
T Consensus 326 ~~~~~Y~~~A~~ 337 (397)
T 2zzr_A 326 PDKETYKYAMHT 337 (397)
T ss_dssp TTHHHHHHHHHH
T ss_pred hhhHHHHHHHHH
Confidence 67 8887654
No 51
>2xbt_A Cellulosomal scaffoldin; sugar binding protein; 1.83A {Bacteroides cellulosolvens}
Probab=38.48 E-value=42 Score=30.85 Aligned_cols=42 Identities=5% Similarity=0.056 Sum_probs=29.6
Q ss_pred CCCCceEEEEEEecccCCCCeeEEEEEEEEEeCCCCcc--cceEEE
Q 006835 532 SSSGAIAIQQKLTTSWISNGKRYYRYSTIVTNKSAKTL--KNLKLS 575 (629)
Q Consensus 532 p~~~~~~~~~~v~~sW~~g~~~~~q~~vtV~N~g~~~i--~~w~i~ 575 (629)
|.++.+.|.++. +.... +....+..+.|+|+|+.+| ++++|+
T Consensus 5 ~~~~~l~V~y~~-~~~~~-~~n~i~~~~~I~N~g~~~i~Ls~lkiR 48 (160)
T 2xbt_A 5 QVNSDLKLLFSN-NGAAA-SSNQIYMNMKLQNTGSSTYDLSKITIR 48 (160)
T ss_dssp CCCCSEEEEEEC-TTCCS-EESSEEEEEEEEECSSCCEEGGGEEEE
T ss_pred CCCCeEEEEEEe-CCCCC-CCCEEEEEEEEEECCCCceecCcEEEE
Confidence 333689999985 32221 1233999999999998875 688887
No 52
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=38.03 E-value=1.4e+02 Score=26.58 Aligned_cols=55 Identities=11% Similarity=0.193 Sum_probs=32.8
Q ss_pred CCCeeEEEEEEEEEeCCCCccc----ceEEEEecCCCCeeeeeecccEEeCCCccccCCCCCeEE
Q 006835 549 SNGKRYYRYSTIVTNKSAKTLK----NLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLE 609 (629)
Q Consensus 549 ~g~~~~~q~~vtV~N~g~~~i~----~w~i~~~~~~~~~W~~~~~~~~~t~pswn~~i~~G~s~~ 609 (629)
+.+.-+|.|.|+|.|.|..++. -|.|+-.+ +.+=.+.+.++ + .=+..|.||++++
T Consensus 24 ~~~~y~faY~ItI~N~~~~~vQL~sRhW~Itd~~--g~~~eV~G~GV-V---GeqP~L~PGe~F~ 82 (134)
T 1tza_A 24 EDEKYLFSYTITIINLGEQAAKLETRHWIITDAN--GKTSEVQGAGV-V---GETPTIPPNTAYQ 82 (134)
T ss_dssp TBCCEEEEEEEEEEECSSSCEEEEEEEEEEEETT--SCEEEEEEESB-T---TBCCEECTTEEEE
T ss_pred CCCEEEEEEEEEEEeCCCCCEEEEecEEEEEeCC--CCEEEEEcCce-E---cCCCcCCCCCceE
Confidence 4466789999999999986542 45554322 23333444444 1 1245788998443
No 53
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=37.62 E-value=2.3e+02 Score=29.47 Aligned_cols=55 Identities=13% Similarity=0.023 Sum_probs=33.6
Q ss_pred EEEEEEEEeCCCCcccceEEEEecC--CC---Ceeeeeec-------ccEEeCCCccccCCCCCeEEEEE
Q 006835 555 YRYSTIVTNKSAKTLKNLKLSISKL--YG---PLWGLTNL-------GNAYGFPSWLNNLAAGKSLEFVY 612 (629)
Q Consensus 555 ~q~~vtV~N~g~~~i~~w~i~~~~~--~~---~~W~~~~~-------~~~~t~pswn~~i~~G~s~~FGf 612 (629)
-+.+++|+|+|+++|+==.+...+. .+ ..|..... +.+++. +..|+||+|.++--
T Consensus 266 l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd---~~pI~PGETr~~~v 332 (382)
T 1yew_A 266 MRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSD---NSPLAPGETRTVDV 332 (382)
T ss_dssp EEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESC---CSCBCTTCEEEEEE
T ss_pred EEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCC---CCCcCCCceeEEEE
Confidence 7899999999998876444442220 11 23333221 224443 56799999998753
No 54
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=36.57 E-value=1e+02 Score=36.01 Aligned_cols=80 Identities=14% Similarity=0.162 Sum_probs=49.7
Q ss_pred ceEEEEEEecccCCC-C----------eeEEEEEEEEEeCC-CCcccceEEEEecCCCCeeeee-------e-ccc--EE
Q 006835 536 AIAIQQKLTTSWISN-G----------KRYYRYSTIVTNKS-AKTLKNLKLSISKLYGPLWGLT-------N-LGN--AY 593 (629)
Q Consensus 536 ~~~~~~~v~~sW~~g-~----------~~~~q~~vtV~N~g-~~~i~~w~i~~~~~~~~~W~~~-------~-~~~--~~ 593 (629)
.+.+++++.+.=.+. | ...|.+.+|++|.| ..+.++|.|-+.+ ...|=.++ . .++ ++
T Consensus 10 ~l~~~~~~~~n~~~~~~~~c~~~~~~~~~~~~~~~tl~n~~~~~~~~~w~iyf~~-~r~i~~~~~~~~~i~~~~gd~~~l 88 (858)
T 1c7s_A 10 QLKLNVKMLDNRAGENGVDCAALGADWASCNRVLFTLSNDGQAIDGKDWVIYFHS-PRQTLRVDNDQFKIAHLTGDLYKL 88 (858)
T ss_dssp TCEEEEEEEETTGGGGTCCTTTTTCGGGCEEEEEEEEEECSSCBCCCCCEEEEEC-SSCEEEECSTTEEEEECSTTEEEE
T ss_pred cceEEEEEecCcccccccccccccccccceeEEEEEEEcCCCCcCCCCcEEEEec-ceeeecCCCCCeeEEEEeCeEEEE
Confidence 567777775533211 1 11599999999994 4456799999774 22333222 1 222 44
Q ss_pred eCCCccccCCCCCeEEEEEEecC
Q 006835 594 GFPSWLNNLAAGKSLEFVYIHTA 616 (629)
Q Consensus 594 t~pswn~~i~~G~s~~FGfi~~~ 616 (629)
++..=-..|+||+++++=|++..
T Consensus 89 ~P~~~f~~~~~g~~~~~~~~~~~ 111 (858)
T 1c7s_A 89 EPTAKFSGFPAGKAVEIPVVAEY 111 (858)
T ss_dssp EECTTCCCBCTTEEEEEEEEEES
T ss_pred ecCCCCCccCCCCEEEEEEEecc
Confidence 44333347999999999998654
No 55
>3hn9_A Lamin-B1; structural genomics, structural genomics consortium, SGC, acetylation, chromosomal rearrangement, coiled coil, intermediate filament; 2.00A {Homo sapiens} PDB: 3umn_A 2kpw_A
Probab=36.11 E-value=38 Score=29.70 Aligned_cols=43 Identities=19% Similarity=0.309 Sum_probs=28.9
Q ss_pred EEEEeCCCCc--ccceEEEEecCCCCeeeeeecccEEeCCCccccCCCCCeEEE
Q 006835 559 TIVTNKSAKT--LKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEF 610 (629)
Q Consensus 559 vtV~N~g~~~--i~~w~i~~~~~~~~~W~~~~~~~~~t~pswn~~i~~G~s~~F 610 (629)
|.|.|++.+. |.||+|.-.- + +....|++|.- -.|+||++++.
T Consensus 27 V~L~N~s~~~~~L~gW~l~r~v--~------~~~~~y~Fp~~-~~L~pg~~vtV 71 (123)
T 3hn9_A 27 IRLKNTSEQDQPMGGWEMIRKI--G------DTSVSYKYTSR-YVLKAGQTVTI 71 (123)
T ss_dssp EEEEECSSSCEECTTCEEEEEE--T------TEEEEEECCTT-CEECTTCEEEE
T ss_pred EEEEECCCCceecCCcEEEEEe--C------CCceEEEcCCC-cEECCCCEEEE
Confidence 7889998764 7899887431 1 11125888863 36889988875
No 56
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=35.76 E-value=89 Score=27.53 Aligned_cols=54 Identities=13% Similarity=0.118 Sum_probs=32.5
Q ss_pred CCeeEEEEEEEEEeCCCCccc----ceEEEEecCCCCeeeeeecccEEeCCCccccCCCCCeEE
Q 006835 550 NGKRYYRYSTIVTNKSAKTLK----NLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLE 609 (629)
Q Consensus 550 g~~~~~q~~vtV~N~g~~~i~----~w~i~~~~~~~~~W~~~~~~~~~t~pswn~~i~~G~s~~ 609 (629)
.+.-+|.|.|+|+|.|..++. .|.|+-.+ +.+=.+.+.++ + .=+..|.||++++
T Consensus 25 ~~~y~faY~I~I~N~~~~~vQL~sRhW~Itd~~--g~~~eV~G~GV-V---G~qP~L~PGe~f~ 82 (126)
T 1xvs_A 25 YQRFVFAYLITIKNLSSQTVQLMSRRWLITDAD--GKQTVVEGDGV-V---GEQPRIKANDEYT 82 (126)
T ss_dssp GTBEEEEEEEEEEECSSSCEEEEEEEEEEEETT--CCEEEEEEESB-T---TBCCEECTTCEEE
T ss_pred CCEEEEEEEEEEEECCCCCEEEEecEEEEEeCC--CCEEEEECCce-E---cCCCcCCCCCceE
Confidence 456789999999999986642 45554322 22333444443 1 1245789998543
No 57
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=34.28 E-value=99 Score=27.26 Aligned_cols=53 Identities=17% Similarity=0.231 Sum_probs=32.0
Q ss_pred CeeEEEEEEEEEeCCCCccc----ceEEEEecCCCCeeeeeecccEEeCCCccccCCCCCeEE
Q 006835 551 GKRYYRYSTIVTNKSAKTLK----NLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLE 609 (629)
Q Consensus 551 ~~~~~q~~vtV~N~g~~~i~----~w~i~~~~~~~~~W~~~~~~~~~t~pswn~~i~~G~s~~ 609 (629)
+.-+|.|.|+|.|.|..++. .|.|+-.+ +.+=.+.+.++ + .=+..|.||++++
T Consensus 27 ~~y~faY~I~I~N~~~~~vQL~sRhW~Itd~~--g~~~eV~G~GV-V---G~qP~L~PGe~f~ 83 (127)
T 2f1e_A 27 GRYAFAYSIRIQNAGAVPARLVARHWQITDGN--GRTEQVDGEGV-V---GEQPWLRPGEAFH 83 (127)
T ss_dssp TBEEEEEEEEEEECSSSCEEEEEEEEEEEETT--SCEEEEEESSB-T---TBCCEECTTCEEE
T ss_pred CEEEEEEEEEEEeCCCCCEEEEeceEEEEeCC--CCEEEEECCCe-e---cCCCcCCCCCceE
Confidence 56789999999999987642 45554322 22333444443 1 1145689998544
No 58
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=26.97 E-value=4e+02 Score=27.33 Aligned_cols=70 Identities=7% Similarity=0.071 Sum_probs=40.8
Q ss_pred HHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCCcccHHHHHHHHHHHHhCChhHH
Q 006835 172 ETAAAMAAASIVFRHSDPAYSSELLRHAYQLFDFADKYRGKYDGSITVAQKYYRSISGYNDELLWAAAWLYQASGNQHYL 251 (629)
Q Consensus 172 ~~AAalA~As~v~k~~d~~~A~~~L~~A~~~~~~a~~~~~~y~~~~~~~~~~Y~s~s~~~De~~wAAaeLy~aTG~~~Yl 251 (629)
-++-++..++++++ |++|.+.+.+.++.+++. +....+.....|. . =.+.....||+.|+++.|+
T Consensus 283 Gi~~~l~~~~~~~~--d~~~~~~a~~~~~~~~~~-----~~~~~~~~LCHG~----a----G~~~~l~~l~~~~~~~~~~ 347 (409)
T 2g0d_A 283 GISLLYLYGGLALD--NDYFVDKAEKILESAMQR-----KLGIDSYMICHGY----S----GLIEICSLFKRLLNTKKFD 347 (409)
T ss_dssp HHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHH-----CTTCCSCCTTTSH----H----HHHHHHHHHHHHHCCCTTH
T ss_pred HHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHh-----ccCCCCCCCCChH----H----HHHHHHHHHHHHhCCHHHH
Confidence 35667777888775 676666555555555543 1101100001111 1 2466778899999999998
Q ss_pred HHHhh
Q 006835 252 DYLGK 256 (629)
Q Consensus 252 ~~~~~ 256 (629)
+.+.+
T Consensus 348 ~~a~~ 352 (409)
T 2g0d_A 348 SYMEE 352 (409)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
No 59
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=26.10 E-value=38 Score=36.44 Aligned_cols=23 Identities=35% Similarity=0.336 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHhCChhHHHHHhh
Q 006835 234 LLWAAAWLYQASGNQHYLDYLGK 256 (629)
Q Consensus 234 ~~wAAaeLy~aTG~~~Yl~~~~~ 256 (629)
++.|.+|||++|+++.|++.+.+
T Consensus 431 lL~allEL~~atq~~~~l~lA~~ 453 (543)
T 2v8i_A 431 ALFALLDLYHASQVADYRKLAEK 453 (543)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHH
Confidence 67899999999999999998755
No 60
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=23.84 E-value=2.4e+02 Score=24.57 Aligned_cols=49 Identities=12% Similarity=0.108 Sum_probs=31.7
Q ss_pred EEEEEEEEeCCCCcccceEEEEecCCCCeeeeeecccEEeCCCccccCCCCCeEEEEEEec
Q 006835 555 YRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLEFVYIHT 615 (629)
Q Consensus 555 ~q~~vtV~N~g~~~i~~w~i~~~~~~~~~W~~~~~~~~~t~pswn~~i~~G~s~~FGfi~~ 615 (629)
....|+|+|.|..+..+.++.+-- +..- .. +. .-.|++|+|.+|=|...
T Consensus 35 ~ti~vtV~N~G~~~a~~~~V~lyv--ng~~--v~---t~-----~v~La~G~s~tv~f~~~ 83 (127)
T 3idu_A 35 AEYEVHVKNLGGIGVPSTKVRVYI--NGTL--YK---NW-----TVSLGPKEEKVLTFNWT 83 (127)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEE--TTEE--EE---EE-----EEEECTTCEEEEEEEEC
T ss_pred EEEEEEEEECCCCccCCcEEEEEE--CCEE--Ee---eE-----EeccCCCCeEEEEEEEE
Confidence 788999999999998888877542 1110 00 01 11488888876666544
No 61
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=23.68 E-value=3.2e+02 Score=23.37 Aligned_cols=23 Identities=13% Similarity=0.258 Sum_probs=17.8
Q ss_pred EEEEEEEEeCCCCcccceEEEEe
Q 006835 555 YRYSTIVTNKSAKTLKNLKLSIS 577 (629)
Q Consensus 555 ~q~~vtV~N~g~~~i~~w~i~~~ 577 (629)
....|+|+|.|..+..++++.+.
T Consensus 21 ~ti~atVkN~G~~~a~~~~V~ly 43 (114)
T 2l0d_A 21 NTMTATIENQGNKDSTSFNVSLL 43 (114)
T ss_dssp EEEEEEEEECSSSCBCCEEEEEE
T ss_pred EEEEEEEEECCCCCCCCEEEEEE
Confidence 56778899999877777777754
No 62
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=22.83 E-value=18 Score=38.30 Aligned_cols=17 Identities=24% Similarity=0.219 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHhcCCC
Q 006835 24 GQALSKSILFFEAQRSGY 41 (629)
Q Consensus 24 ~~~l~~sl~ff~~QR~G~ 41 (629)
.+.+++.+.-|+.. .|+
T Consensus 17 ~~~~~~~~~~F~~~-~gi 33 (449)
T 3iot_A 17 YNGLAEVGKKFEKD-TGI 33 (449)
T ss_dssp HHHHHHHHHHHHHH-HSC
T ss_pred hHHHHHHHHHHhhc-cCC
Confidence 35667777767665 564
No 63
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=20.77 E-value=21 Score=41.38 Aligned_cols=15 Identities=0% Similarity=0.034 Sum_probs=0.0
Q ss_pred CceEEEEEEecccCC
Q 006835 535 GAIAIQQKLTTSWIS 549 (629)
Q Consensus 535 ~~~~~~~~v~~sW~~ 549 (629)
..+++.++..+.|..
T Consensus 760 ~~~~~~~~~~~~~~~ 774 (791)
T 3m0c_C 760 EIVTMSHQALGDVAG 774 (791)
T ss_dssp ---------------
T ss_pred ceeecchhhcccccc
Confidence 345666665555544
No 64
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=20.28 E-value=2.2e+02 Score=24.86 Aligned_cols=55 Identities=20% Similarity=0.241 Sum_probs=29.5
Q ss_pred EEEEEEEEeCCCCcccceEEEEecCCCCeeeeeecccEEeCCCccccCCCCCeEE--EEEEec
Q 006835 555 YRYSTIVTNKSAKTLKNLKLSISKLYGPLWGLTNLGNAYGFPSWLNNLAAGKSLE--FVYIHT 615 (629)
Q Consensus 555 ~q~~vtV~N~g~~~i~~w~i~~~~~~~~~W~~~~~~~~~t~pswn~~i~~G~s~~--FGfi~~ 615 (629)
....++|+|.|+.+.....+.+-.. +.. .+ +..+.--. .+.|++|+|.+ |-+...
T Consensus 18 vTvsatVkN~Gt~~s~a~~V~~yl~-~p~---~g-g~~vgt~t-v~~LaaG~s~t~~v~~~~~ 74 (122)
T 2kut_A 18 ITVSARVTNRGAAEAHNVPVAVYLG-NPA---QG-GVEIGRDT-ISRIPVGGTGLARVQWKAT 74 (122)
T ss_dssp EEEEEEEECCSSSCBCCCCEEECSS-CTT---TC-CCCCBCCC-CSCBCTTCEEECCEEEECC
T ss_pred EEEEEEEEeCCCcccCcEEEEEEeC-CCc---cC-CeEEeeEE-ccccCCCCeEEEEEEEecC
Confidence 4556778888887777666665421 110 01 11111101 36799999888 555543
Done!