Query 006838
Match_columns 629
No_of_seqs 149 out of 219
Neff 3.6
Searched_HMMs 13730
Date Mon Mar 25 10:18:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006838.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/006838hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1tvga_ b.18.1.9 (A:) Placenta 99.3 1E-11 7.6E-16 108.6 15.2 131 221-359 1-134 (136)
2 d1w8oa2 b.18.1.1 (A:506-647) S 98.8 3.6E-08 2.6E-12 84.0 14.3 115 241-358 20-141 (142)
3 d1k3ia2 b.18.1.1 (A:-12-150) G 98.4 1.3E-06 9.5E-11 76.0 13.4 128 229-359 25-161 (162)
4 d1gqpa_ b.18.1.9 (A:) APC10/DO 98.4 1E-06 7.2E-11 82.9 13.0 121 235-358 65-193 (194)
5 d1jhja_ b.18.1.9 (A:) APC10/DO 98.4 7.3E-07 5.3E-11 80.6 10.8 122 234-358 33-160 (161)
6 d1k12a_ b.18.1.15 (A:) Fucose 97.3 0.0012 8.7E-08 57.0 12.1 112 241-358 32-153 (158)
7 d1o59a2 b.18.1.22 (A:194-343) 96.4 0.01 7.5E-07 53.7 10.9 129 221-357 3-149 (150)
8 d1o59a1 b.18.1.22 (A:0-187) Al 95.7 0.12 8.9E-06 47.9 14.9 132 221-358 24-184 (188)
9 d1d7pm_ b.18.1.2 (M:) C2 domai 95.4 0.029 2.1E-06 49.1 8.9 92 262-359 57-157 (159)
10 d2qqia2 b.18.1.2 (A:273-427) B 94.9 0.045 3.3E-06 47.4 8.8 91 262-358 51-152 (155)
11 d1czsa_ b.18.1.2 (A:) C2 domai 94.5 0.06 4.4E-06 47.0 8.6 91 262-358 56-157 (160)
12 d1sddb3 b.18.1.2 (B:1863-2024) 94.4 0.062 4.5E-06 47.0 8.5 91 262-358 57-158 (162)
13 d2qqia1 b.18.1.2 (A:431-586) C 94.4 0.08 5.8E-06 45.9 9.1 91 262-358 52-153 (156)
14 d1xnta_ b.18.1.8 (A:) N-termin 74.3 28 0.0021 30.8 14.0 110 240-356 19-150 (151)
15 d1seta1 a.2.7.1 (A:1-110) Sery 63.2 20 0.0015 28.8 9.3 84 478-570 12-95 (110)
16 d1lrza1 a.2.7.4 (A:245-309) Me 54.8 33 0.0024 26.3 8.5 50 477-530 1-56 (65)
17 d1h7ca_ a.7.5.1 (A:) Tubulin c 53.9 44 0.0032 27.5 9.8 41 466-514 2-42 (103)
18 d1gs9a_ a.24.1.1 (A:) Apolipop 51.9 29 0.0021 29.1 8.6 86 470-561 43-137 (144)
19 d1gqea_ e.38.1.1 (A:) Polypept 51.1 40 0.0029 32.9 10.7 18 464-481 5-22 (362)
20 d1vcsa1 a.47.2.1 (A:8-96) Vesi 48.2 16 0.0012 29.3 5.9 56 491-559 32-87 (89)
21 d1lvfa_ a.47.2.1 (A:) Syntaxin 46.4 41 0.003 27.2 8.4 58 469-526 14-71 (106)
22 d1i4da_ a.238.1.2 (A:) Arfapti 46.0 75 0.0055 26.1 13.4 85 477-562 85-172 (200)
23 d1ez3a_ a.47.2.1 (A:) Syntaxin 45.5 71 0.0052 25.7 10.1 68 494-561 7-74 (124)
24 d2bdea1 c.108.1.23 (A:2-459) C 41.4 16 0.0011 37.3 6.0 35 538-572 373-407 (458)
25 d1xoya_ b.18.1.26 (A:) Hypothe 39.8 53 0.0039 28.7 8.6 100 249-359 47-161 (161)
26 d2elba1 a.238.1.1 (A:6-273) DC 38.4 1.3E+02 0.0092 26.5 13.2 84 509-592 114-213 (268)
27 d1gs9a_ a.24.1.1 (A:) Apolipop 30.3 89 0.0065 25.8 8.3 17 477-493 12-28 (144)
28 d1fxka_ a.2.5.1 (A:) Prefoldin 28.9 86 0.0063 24.9 7.6 19 537-555 84-102 (107)
29 d2clya1 f.52.1.1 (A:79-183) AT 28.1 1.2E+02 0.0089 24.9 8.5 56 496-556 5-61 (105)
30 d1nkpb_ a.38.1.1 (B:) Max prot 27.2 30 0.0022 26.5 4.2 55 489-558 25-80 (83)
31 d1nkpa_ a.38.1.1 (A:) Myc prot 25.6 56 0.0041 25.2 5.6 56 489-559 29-86 (88)
32 d1y2oa1 a.238.1.3 (A:1-248) BA 20.1 2.6E+02 0.019 24.2 13.4 112 457-568 14-147 (248)
No 1
>d1tvga_ b.18.1.9 (A:) Placental protein 25, pp25 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=1e-11 Score=108.62 Aligned_cols=131 Identities=11% Similarity=0.173 Sum_probs=102.1
Q ss_pred ccccccccCceEeecccccc--ccCcccccCcccccccccCCCCcEEEEEecceeeecEEEEeecccccCCCCeEEEEee
Q 006838 221 YNYASAMKGAKLVAHNKEAK--GASNILGKDHNKYLRNPCSVAGKFVVIELGEETLVDTVKIANFEHYSSNFKEFELSGS 298 (629)
Q Consensus 221 ~NYAS~d~GAkIl~sn~eak--gasnIL~~nkD~YMLnPCsa~~kfVVIELcEeI~V~~I~IANfE~fSS~pKdF~VsgS 298 (629)
.|||....||+|++++.... +|++++.+|.+.|-......+ +|++|+|.+...|++|.|.+. ......|+|++|
T Consensus 1 ~d~~l~~~G~~v~~~ss~~~~~~~~~~iDgd~~T~W~s~~~~p-~~i~idl~~~~~i~~i~i~~~---~~~~~~~~i~~s 76 (136)
T d1tvga_ 1 IDLCLSSEGSEVILATSSDEKHPPENIIDGNPETFWTTTGMFP-QEFIICFHKHVRIERLVIQSY---FVQTLKIEKSTS 76 (136)
T ss_dssp CBTTCGGGTCEEECCSCCCTTSCGGGGGSSCTTCCEECCSCSS-EEEEEEEEEEEEEEEEEEEEE---SEEEEEEEEECS
T ss_pred CceeeccCCcEEEEEecCCCCCCHHheEcCCCCceeecCCCCc-EEEEEECCCeEEEeeEEEEec---ccceeEEEEEEc
Confidence 48999999999998776444 489999999999998776544 699999999999999999985 222234444454
Q ss_pred ccCCCCCceeeEEEEeecccc-ceeeeCCCCceEEEEEEEEeeccCCcceeeeeEEEEeccc
Q 006838 299 LSYPTEVWSPLGKFVATNVKQ-LQSFKLPEPKWVRYLKLNLLSHYGSEFYCTLSVVEVYGVD 359 (629)
Q Consensus 299 ~~YPt~~W~~LG~F~a~N~R~-~Q~F~L~~~~w~RYLKle~LSHyGsE~YC~LS~vrVyG~t 359 (629)
. +...|+.++..+..+... .|.-.+..+.-+|||||.+++.||. |+.|+-|+|||..
T Consensus 77 ~--Dg~~w~~v~~~~~~~~~~~~~~~~~~~~~~aryvR~~i~s~~g~--~~~i~ev~v~G~~ 134 (136)
T d1tvga_ 77 K--EPVDFEQWIEKDLVHTEGQLQNEEIVAHGSATYLRFIIVSAFDH--FASVHSVSAEGTV 134 (136)
T ss_dssp S--SSCCCEEEEEEECCCCTTCCEEEEECCCEEEEEEEEEEEEESSS--CCEEEEEEEEEEE
T ss_pred c--CCceeEEEEEecccCCCCcceEEecCCccEEEEEEEEEEeccCC--cEEEEEEEEEeEE
Confidence 4 567899999988755332 3443455677899999999999984 6679999999984
No 2
>d1w8oa2 b.18.1.1 (A:506-647) Sialidase, C-terminal domain {Micromonospora viridifaciens [TaxId: 1881]}
Probab=98.82 E-value=3.6e-08 Score=84.04 Aligned_cols=115 Identities=17% Similarity=0.236 Sum_probs=89.0
Q ss_pred ccCcccccCcccccc-----cccCCCCcEEEEEecceeeecEEEEeecccc-cCCCCeEEEEeeccCCCCCceeeEEEE-
Q 006838 241 GASNILGKDHNKYLR-----NPCSVAGKFVVIELGEETLVDTVKIANFEHY-SSNFKEFELSGSLSYPTEVWSPLGKFV- 313 (629)
Q Consensus 241 gasnIL~~nkD~YML-----nPCsa~~kfVVIELcEeI~V~~I~IANfE~f-SS~pKdF~VsgS~~YPt~~W~~LG~F~- 313 (629)
.+++++.+|.+.|-- ++......|++|.|.+.+.|+.|.|.+..-. ...++.|.|++|. +...|..+....
T Consensus 20 ~a~~~~Dg~~~T~W~s~~~~~~~~~~~~wi~idl~~~~~v~~i~i~~~~~~~~~~~~~~~i~~S~--dg~~w~~~~~~~~ 97 (142)
T d1w8oa2 20 RASNVIDGNPSTFWHTEWSRADAPGYPHRISLDLGGTHTISGLQYTRRQNSANEQVADYEIYTSL--NGTTWDGPVASGR 97 (142)
T ss_dssp CGGGGGSSCTTCCEECCCSSTTCCCSCEEEEEEEEEEEEEEEEEEEECSSCSTTCBCEEEEEEES--SSSSCEEEEEEEE
T ss_pred CHHheEcCCCCCcccccCcCCCCCCccEEEEEECCCeEEeeEEEEECccccCcCCceeEEEEEec--CCCceEEEEEeee
Confidence 357888888887643 3334445699999999999999999886533 3469999999997 356786654433
Q ss_pred eeccccceeeeCCCCceEEEEEEEEeeccCCcceeeeeEEEEecc
Q 006838 314 ATNVKQLQSFKLPEPKWVRYLKLNLLSHYGSEFYCTLSVVEVYGV 358 (629)
Q Consensus 314 a~N~R~~Q~F~L~~~~w~RYLKle~LSHyGsE~YC~LS~vrVyG~ 358 (629)
..+....|.|.+ ++.-+|||||.+++.+|.+.++.+.-|+|||.
T Consensus 98 ~~~~~~~~~~~~-~~~~aryvRl~~~~~~~~~~~~~i~Ei~v~G~ 141 (142)
T d1w8oa2 98 FTTSLAPQRAVF-PARDARYIRLVALSEQTGHKYAAVAELEVEGQ 141 (142)
T ss_dssp CCSCSSCEEEEE-EEEEEEEEEEEECCBTTSCSCCEEEEEEEEEC
T ss_pred cCCCCceEEEec-CceEEEEEEEEEEecCCCCceEEEEEEEEEEE
Confidence 344556677777 45678999999999999998889999999996
No 3
>d1k3ia2 b.18.1.1 (A:-12-150) Galactose oxidase, N-terminal domain {Fungi (Fusarium sp.) [TaxId: 29916]}
Probab=98.44 E-value=1.3e-06 Score=76.04 Aligned_cols=128 Identities=8% Similarity=0.109 Sum_probs=93.5
Q ss_pred CceEeecccc-ccccCcccccCccccccc-ccCC----CCcEEEEEecceeeecEEEEeeccc--ccCCCCeEEEEeecc
Q 006838 229 GAKLVAHNKE-AKGASNILGKDHNKYLRN-PCSV----AGKFVVIELGEETLVDTVKIANFEH--YSSNFKEFELSGSLS 300 (629)
Q Consensus 229 GAkIl~sn~e-akgasnIL~~nkD~YMLn-PCsa----~~kfVVIELcEeI~V~~I~IANfE~--fSS~pKdF~VsgS~~ 300 (629)
|-+|-+.+.+ ...+.+++.+|.+.|.-. .|.. ...|++|.|.+...|..|.|.+..- -...+++|+|++|..
T Consensus 25 ~~~vtass~~~g~~~~~a~DG~~~T~w~s~~~~~~~~~~p~~i~idl~~~~~i~~v~i~~r~~~~~~~~~~~~~i~~S~d 104 (162)
T d1k3ia2 25 NWAVTCDSAQSGNECNKAIDGNKDTFWHTFYGANGDPKPPHTYTIDMKTTQNVNGLSMLPRQDGNQNGWIGRHEVYLSSD 104 (162)
T ss_dssp TCEEEESCCCTTSCGGGGSSSCTTCCEECCCGGGCCCCSCEEEEEEEEEEEEEEEEEEECCCSSCCTTCBCEEEEEEESS
T ss_pred CCEEEEeCCCCCChhHheEeCCCCccccccccccCCCCCCeEEEEeCCcEEEEeEEEEEecCCccccccccceEEEecCC
Confidence 4455444433 345788999998887643 3322 2369999999999999999987543 344799999999984
Q ss_pred CCCCCceeeEEEEeec-cccceeeeCCCCceEEEEEEEEeeccCCcceeeeeEEEEeccc
Q 006838 301 YPTEVWSPLGKFVATN-VKQLQSFKLPEPKWVRYLKLNLLSHYGSEFYCTLSVVEVYGVD 359 (629)
Q Consensus 301 YPt~~W~~LG~F~a~N-~R~~Q~F~L~~~~w~RYLKle~LSHyGsE~YC~LS~vrVyG~t 359 (629)
...|..+......+ ....+.+.+ .+.-+|||||.+++.+|...++.|.-|+||+.+
T Consensus 105 --g~~w~~~~~~~~~~~~~~~~~~~~-~~~~aryvRi~~~~~~~g~~~~~i~E~~~y~~~ 161 (162)
T d1k3ia2 105 --GTNWGSPVASGSWFADSTTKYSNF-ETRPARYVRLVAITEANGQPWTSIAEINVFQAS 161 (162)
T ss_dssp --SSCCCSCSEEEECCSSSSCEEEEE-EEEEEEEEEEEECSBTTSCSCCEESEEEEEECS
T ss_pred --CceeeeeEEEEecCCCCceEEecc-CCeeEEEEEEEEEecCCCCeeeEEEEEEEEccC
Confidence 56787776554433 344444444 357899999999999998888889999999864
No 4
>d1gqpa_ b.18.1.9 (A:) APC10/DOC1 subunit of the anaphase-promoting complex {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.42 E-value=1e-06 Score=82.90 Aligned_cols=121 Identities=9% Similarity=-0.006 Sum_probs=97.3
Q ss_pred ccccccccCcccccCcccccccccCCCCcEEEEEecceeeecEEEEe-ecc-cccCCCCeEEEEeeccCCCCCceeeEEE
Q 006838 235 HNKEAKGASNILGKDHNKYLRNPCSVAGKFVVIELGEETLVDTVKIA-NFE-HYSSNFKEFELSGSLSYPTEVWSPLGKF 312 (629)
Q Consensus 235 sn~eakgasnIL~~nkD~YMLnPCsa~~kfVVIELcEeI~V~~I~IA-NfE-~fSS~pKdF~VsgS~~YPt~~W~~LG~F 312 (629)
+.+..-++.+++.+|.+.|--..- ...+|+.|.|.+...|..|.|. ++. --|-+|+.++|++|.. ...|..+.+.
T Consensus 65 S~~~g~~~~~~~Dgn~~T~W~S~~-~~ph~i~idl~~~~~i~~i~i~~~~~~d~sy~p~~~~i~~s~d--~~~w~~v~t~ 141 (194)
T d1gqpa_ 65 SFKLGNPVDFALDDNYDTFWQSDG-GQPHQLDIMFSKRMDICVMAIFFSMIADESYAPSLVKVYAGHS--PSDARFYKML 141 (194)
T ss_dssp CCCTTCCGGGGSSSCTTCCEECCS-SSSEEEEEEEEEEEEECEEEEEEEHHHHGGGSEEEEEEEEESS--TTTCEEEEEE
T ss_pred ecCCCCCHHHhcCCCCcceeccCC-CCCEEEEEECCCCcEEEEEEEEecccccccCCceEEEEEEeCC--cCCceEEEEE
Confidence 445667789999999999987643 3457999999999999999982 222 2355899999999984 4689999999
Q ss_pred EeeccccceeeeCC------CCceEEEEEEEEeeccCCcceeeeeEEEEecc
Q 006838 313 VATNVKQLQSFKLP------EPKWVRYLKLNLLSHYGSEFYCTLSVVEVYGV 358 (629)
Q Consensus 313 ~a~N~R~~Q~F~L~------~~~w~RYLKle~LSHyGsE~YC~LS~vrVyG~ 358 (629)
+..+..+...+.+. .|..+|||||.++++|.+.-=|.|..|||||.
T Consensus 142 ~~~~~~Gwv~i~l~~~~~~~~pv~aryIri~i~~nhqnGkDt~IR~irv~Gp 193 (194)
T d1gqpa_ 142 EVRNVNGWVALRFLDNREDDQLLKCQFIRLLFPVNHENGKDTHLRGIRLYVP 193 (194)
T ss_dssp EEEECEEEEEECCC--------EEEEEEEEEEEEESTTCSSCEESCEEEEEE
T ss_pred EecCCCceEEEEcccCcccCCeEEEEEEEEEEEecccCCcccEEEeeEEeCC
Confidence 98887778888774 35689999999999887766789999999996
No 5
>d1jhja_ b.18.1.9 (A:) APC10/DOC1 subunit of the anaphase-promoting complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.39 E-value=7.3e-07 Score=80.59 Aligned_cols=122 Identities=12% Similarity=0.126 Sum_probs=95.0
Q ss_pred eccccccccCcccccCcccccccccCCCCcEEEEEecceeeecEEEEee--cccccCCCCeEEEEeeccCCCCCceeeEE
Q 006838 234 AHNKEAKGASNILGKDHNKYLRNPCSVAGKFVVIELGEETLVDTVKIAN--FEHYSSNFKEFELSGSLSYPTEVWSPLGK 311 (629)
Q Consensus 234 ~sn~eakgasnIL~~nkD~YMLnPCsa~~kfVVIELcEeI~V~~I~IAN--fE~fSS~pKdF~VsgS~~YPt~~W~~LG~ 311 (629)
++.+.--++.+++.+|...|--.-=. ..+|++|.|.+...|..|.|.- -.--+-.|++++|++|.. ...|..|.+
T Consensus 33 SS~~~g~~~~~l~Dgd~~T~W~S~~~-~ph~I~idl~~~~~i~~i~i~~~~~~d~s~~p~~~~i~~s~d--~~~w~~v~~ 109 (161)
T d1jhja_ 33 SSCKPGFGVDQLRDDNLETYWQSDGS-QPHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNN--FHNLQEIRQ 109 (161)
T ss_dssp SCCBTTBSTHHHHSSCTTCCEECCSS-SSEEEEEEEEEEEEECEEEEEEEHHHHGGGSEEEEEEEEESS--TTSCEEEEE
T ss_pred ecCCCCCCHHHccCCCCCceeecCCC-CCEEEEEEcCCCeEEEEEEEEecCCCCcCCCcEEEEEEEcCC--cCCceeEEE
Confidence 45556667889999999999854322 3579999999999999999842 233467899999999984 588999999
Q ss_pred EEeeccccceeeeC----CCCceEEEEEEEEeeccCCcceeeeeEEEEecc
Q 006838 312 FVATNVKQLQSFKL----PEPKWVRYLKLNLLSHYGSEFYCTLSVVEVYGV 358 (629)
Q Consensus 312 F~a~N~R~~Q~F~L----~~~~w~RYLKle~LSHyGsE~YC~LS~vrVyG~ 358 (629)
++..+........+ .++..+|||||.+.+++...--|-|..|||||.
T Consensus 110 ~~~~~~~g~~~~~~~~~~~~~~~~ryiri~i~~n~~~G~D~~Ir~i~V~Gp 160 (161)
T d1jhja_ 110 LELVEPSGWIHVPLTDNHKKPTRTFMIQIAVLANHQNGRDTHMRQIKIYTP 160 (161)
T ss_dssp EECSSCEEEEEEECBCTTSSBEEEEEEEEEEEEEGGGCSSCEECEEEEEEE
T ss_pred EEecCCCCceEEEeeccCCCcEEEEEEEEEEeecccCCcccEEEEEEEEeC
Confidence 99877665555554 355789999999998665444588999999994
No 6
>d1k12a_ b.18.1.15 (A:) Fucose binding lectin {European eel (Anguilla anguilla) [TaxId: 7936]}
Probab=97.29 E-value=0.0012 Score=56.96 Aligned_cols=112 Identities=20% Similarity=0.208 Sum_probs=80.6
Q ss_pred ccCcccccCccccc-ccccCC----CCcEEEEEecceeeecEEEEeec-ccccCCCCeEEEEeeccCCCCCce----eeE
Q 006838 241 GASNILGKDHNKYL-RNPCSV----AGKFVVIELGEETLVDTVKIANF-EHYSSNFKEFELSGSLSYPTEVWS----PLG 310 (629)
Q Consensus 241 gasnIL~~nkD~YM-LnPCsa----~~kfVVIELcEeI~V~~I~IANf-E~fSS~pKdF~VsgS~~YPt~~W~----~LG 310 (629)
.|++.+.+|.+.|. -..|.. ...|+.|.|-+.-.|+.|.|.|- ......+++|+|++++.. ..|. .-|
T Consensus 32 ~a~~AvDG~~~t~w~s~~~~~T~~~~~~W~~VDLg~~~~i~~v~i~~r~d~~~~~~~~~~i~vs~d~--~~~~~~~~~~~ 109 (158)
T d1k12a_ 32 EASNAIDGNRDSNFYHGSCTHSSGQANPWWRVDLLQVYTITSVTITNRGDCCGERISGAEINIGQHL--ASNGVNNPECS 109 (158)
T ss_dssp CGGGGGSSCCCCCGGGSCSCCBCSCSSCEEEEEEEEEEEEEEEEEEECSSSCTTTTTTCEEEEESSC--TTTTTTSCEEE
T ss_pred CHHHcCCCCccCCccccccccCCCCCCcEEEEEcCCceEeeEEEEEcccccccccccceeEEeccCc--cccceecceeC
Confidence 46677778877764 335642 35699999999999999999884 566788999999999853 3343 334
Q ss_pred EEEeeccccceeeeCCCCceEEEEEEEEeeccCCcceeeeeEEEEecc
Q 006838 311 KFVATNVKQLQSFKLPEPKWVRYLKLNLLSHYGSEFYCTLSVVEVYGV 358 (629)
Q Consensus 311 ~F~a~N~R~~Q~F~L~~~~w~RYLKle~LSHyGsE~YC~LS~vrVyG~ 358 (629)
...........++.+..+.-+|||||.+. |..++. |.-|+|||.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~gRYVrI~~~---~~~~ls-l~EveVY~~ 153 (158)
T d1k12a_ 110 VIGSMATGETKTFHCPAPMIGRYVVTYLP---TSESLH-LCEVEVNVD 153 (158)
T ss_dssp ECCCCCTTCEEEEEEEEEEEEEEEEEECC---SSSCCC-EEEEEEEEE
T ss_pred cccccCCCCeEEEECCCCceEEEEEEEeC---CCceEE-EEEEEEecC
Confidence 33322334556777777788999999974 555554 789999985
No 7
>d1o59a2 b.18.1.22 (A:194-343) Allantoicase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.40 E-value=0.01 Score=53.65 Aligned_cols=129 Identities=19% Similarity=0.315 Sum_probs=87.6
Q ss_pred ccccccccCceEeeccccccc-cCcccccCccccc---------ccccCCCCcEEEEEecce-eeecEEEEeecccccCC
Q 006838 221 YNYASAMKGAKLVAHNKEAKG-ASNILGKDHNKYL---------RNPCSVAGKFVVIELGEE-TLVDTVKIANFEHYSSN 289 (629)
Q Consensus 221 ~NYAS~d~GAkIl~sn~eakg-asnIL~~nkD~YM---------LnPCsa~~kfVVIELcEe-I~V~~I~IANfE~fSS~ 289 (629)
+|-||...|++|++.+-+--+ ++|+|.+++..-| +.|- ..-|+||+|... -.|+.|+|---=|=-..
T Consensus 3 vdLas~~~Gg~vv~~sD~~f~~~~nll~pg~~~~m~DGWETrRrR~~g--~~DW~IikLg~~~g~I~~i~iDT~~F~GN~ 80 (150)
T d1o59a2 3 IDLAYVCNGAVALKYSDQHFGSVDNLLLPGRGHDMSDGWETKRSRQPG--HTDWAVIQLGRESSFIEKIIVDTAHFRGNF 80 (150)
T ss_dssp EETTCGGGTCEEEEESCCSEECGGGGGCSSSCSSGGGSEECCCCCSTT--CCEEEEEECSSCCSEEEEEEEECTTCSSSC
T ss_pred EeeechhcCCEEEEECccccCCHHHeeccCCCCcCCCcCccccCCCCC--CCCEEEEEccCCCceEEEEEEeecccCCCc
Confidence 588999999999998865544 5888887776666 3331 115999999854 66788877432233344
Q ss_pred CCeEEEEeecc--CC-----CCCceeeEEEEeeccccceeeeCCCCceEEEEEEEEeeccCCcceeeeeEEEEec
Q 006838 290 FKEFELSGSLS--YP-----TEVWSPLGKFVATNVKQLQSFKLPEPKWVRYLKLNLLSHYGSEFYCTLSVVEVYG 357 (629)
Q Consensus 290 pKdF~VsgS~~--YP-----t~~W~~LG~F~a~N~R~~Q~F~L~~~~w~RYLKle~LSHyGsE~YC~LS~vrVyG 357 (629)
|..++|.|... -| ..+|..|=.=+.-.......|.+.++.-+-+|||.+.=-=| ++++||||
T Consensus 81 P~~~sie~~~~~~~~~~~~~~~~W~~ll~~t~L~~d~~h~f~~~~~~~~THvRLnIyPDGG------IaRlRv~G 149 (150)
T d1o59a2 81 PQFITVEGCLKESESSENTGEGTWVELVGKSKTGPDKEHVYEIRKSIRVSHVKLTIIPDGG------VKRIRVWG 149 (150)
T ss_dssp CSEEEEEEECC-----------CEEEEEEEEECCTTCEEEEEEEEECCCSEEEEEEESCCE------ECEEEEEE
T ss_pred cceEEEEEEecCCccccccccCCeEEeecccccCCCceeEEEccCCCceEEEEEEEeCCCC------ceeEEeec
Confidence 77788887531 11 23698874444433334567888777667899998865555 89999999
No 8
>d1o59a1 b.18.1.22 (A:0-187) Allantoicase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.66 E-value=0.12 Score=47.95 Aligned_cols=132 Identities=13% Similarity=0.145 Sum_probs=90.1
Q ss_pred ccccccccCceEeeccccc-cccCcccccCcccccccc---------c-------CCCCcEEEEEecce-eeecEEEEee
Q 006838 221 YNYASAMKGAKLVAHNKEA-KGASNILGKDHNKYLRNP---------C-------SVAGKFVVIELGEE-TLVDTVKIAN 282 (629)
Q Consensus 221 ~NYAS~d~GAkIl~sn~ea-kgasnIL~~nkD~YMLnP---------C-------sa~~kfVVIELcEe-I~V~~I~IAN 282 (629)
+|-||...|++|++.+-+- -.+.|+|.+....+...- - ....-|+||+|.-. ..|+.|+|--
T Consensus 24 vdLas~~~Gg~vi~~sD~~F~~~~nll~p~~pv~~~~~~~~~g~m~DGWETrRrR~~g~DW~IikLg~~~g~I~~i~IDT 103 (188)
T d1o59a1 24 VDVIGSKLGGQVVSFSDEWFASAENLIQPTAPIRDPTRFVHSGAWYDGWETRRHNEMEYDWVIIKMGVAAAHIIGGEIDT 103 (188)
T ss_dssp EETTCGGGTCEEEEESCCSSBCGGGGGCSSCCCCC---------CCSSEECCSSCSSSCEEEEEECSSSCEEEEEEEEEC
T ss_pred EEeeccccCCEEEEEccchhcCHHHhcCCCCcccccccccccCccccccccccccCCCCceEEEEecCCCceEEEEEEec
Confidence 6999999999999988654 446889987664321110 0 11246999999865 7899988854
Q ss_pred cccccCCCCeEEEEeeccC--------CCCCceeeEEEEeeccccceeeeCCC---CceEEEEEEEEeeccCCcceeeee
Q 006838 283 FEHYSSNFKEFELSGSLSY--------PTEVWSPLGKFVATNVKQLQSFKLPE---PKWVRYLKLNLLSHYGSEFYCTLS 351 (629)
Q Consensus 283 fE~fSS~pKdF~VsgS~~Y--------Pt~~W~~LG~F~a~N~R~~Q~F~L~~---~~w~RYLKle~LSHyGsE~YC~LS 351 (629)
-=|=-..|-.++|.|...- ....|..|=.=+.-.......|.+.+ ..-+-+|||.+.=-=| ++
T Consensus 104 ~~FkGN~P~~~Sie~~~~~~~~~~~~~~~~~W~~lL~~tkL~~d~~h~F~~~~~~~~~~~THvRLnIyPDGG------Ia 177 (188)
T d1o59a1 104 AFFNGNHAPFVSIEALYDEGEEGNIVEDDSRWVEIVEKFECGPSQRHLFVRGNGLTKERFTHIKLKMYPDGG------IA 177 (188)
T ss_dssp TTCSSSBCSEEEEEEECCCSCCSCCCTTCTTCEEEEEEEECCTTCEEEEECTTCSCSSCBSEEEEEEESCCE------ES
T ss_pred ccccCCcccEEEEEEEecCCCcccccccccchhhhccccccCCCccceeeccccccCCeeEEEEEEEECCCC------ee
Confidence 3344456777888886321 12469988766655444556787764 3467889998765444 89
Q ss_pred EEEEecc
Q 006838 352 VVEVYGV 358 (629)
Q Consensus 352 ~vrVyG~ 358 (629)
++||||.
T Consensus 178 RlRv~G~ 184 (188)
T d1o59a1 178 RFRLYGR 184 (188)
T ss_dssp EEEEEEE
T ss_pred EEEEeee
Confidence 9999996
No 9
>d1d7pm_ b.18.1.2 (M:) C2 domain of factor VIII {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.35 E-value=0.029 Score=49.11 Aligned_cols=92 Identities=21% Similarity=0.228 Sum_probs=67.9
Q ss_pred CcEEEEEecceeeecEEEEeec--ccccCCCCeEEEEeeccCCCCCceeeEE------EEeec-cccceeeeCCCCceEE
Q 006838 262 GKFVVIELGEETLVDTVKIANF--EHYSSNFKEFELSGSLSYPTEVWSPLGK------FVATN-VKQLQSFKLPEPKWVR 332 (629)
Q Consensus 262 ~kfVVIELcEeI~V~~I~IANf--E~fSS~pKdF~VsgS~~YPt~~W~~LG~------F~a~N-~R~~Q~F~L~~~~w~R 332 (629)
..|+-|.|-+...|..|.+.-. .....-++.|.|.-|. +...|....+ |.+.. ........++.|..+|
T Consensus 57 ~~wlqvDl~~~~~vtgi~tqG~~~~~~~~~v~~y~l~yS~--dg~~w~~y~~~~~~~vF~gn~d~~~~v~~~~~~pi~ar 134 (159)
T d1d7pm_ 57 KEWLQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQ--DGHQWTLFFQNGKVKVFQGNQDSFTPVVNCLDPPLLTR 134 (159)
T ss_dssp TCCEEEEEEEEEEEEEEEEECEEETTEEEEEEEEEEEEES--SSSSCEECEETTEECCEECCSSSSCCEEEEEEEEEEEE
T ss_pred ceeEEccCCcceEEEEEEecccCCCCcceeEEEEEEEEec--CCCeEEEEecCCceEEEeeecCCCceEEEECCCCeEEE
Confidence 4699999999999999999753 2234568899999886 4577876643 55432 2223445566788999
Q ss_pred EEEEEEeeccCCcceeeeeEEEEeccc
Q 006838 333 YLKLNLLSHYGSEFYCTLSVVEVYGVD 359 (629)
Q Consensus 333 YLKle~LSHyGsE~YC~LS~vrVyG~t 359 (629)
||||.-++++| +.| =+|+|||=+
T Consensus 135 yiRi~P~~w~~--~~~--lRvElyGC~ 157 (159)
T d1d7pm_ 135 YLRIHPQSWVH--QIA--LRMEVLGCE 157 (159)
T ss_dssp EEEEEEEEEES--SCC--BEEEEEEEE
T ss_pred EEEEEEeecCC--ccE--EEEEEeeEc
Confidence 99999999997 457 589999953
No 10
>d2qqia2 b.18.1.2 (A:273-427) B1 domain of neuropilin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.93 E-value=0.045 Score=47.43 Aligned_cols=91 Identities=19% Similarity=0.298 Sum_probs=64.7
Q ss_pred CcEEEEEecceeeecEEEEeecc----cccCCCCeEEEEeeccCCCCCceeeEE------EEee-ccccceeeeCCCCce
Q 006838 262 GKFVVIELGEETLVDTVKIANFE----HYSSNFKEFELSGSLSYPTEVWSPLGK------FVAT-NVKQLQSFKLPEPKW 330 (629)
Q Consensus 262 ~kfVVIELcEeI~V~~I~IANfE----~fSS~pKdF~VsgS~~YPt~~W~~LG~------F~a~-N~R~~Q~F~L~~~~w 330 (629)
..|+-|.|-+...|..|.+...- ....-++.|.|.-|. +...|....+ |.+. |........++.|..
T Consensus 51 ~~wlqvDlg~~~~itgi~~qg~~~~~~~~~~~v~~y~~~ys~--dg~~w~~~~~~~~~~vF~gn~d~~~~v~~~l~~pi~ 128 (155)
T d2qqia2 51 REWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSS--NGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLI 128 (155)
T ss_dssp TCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEES--SSSSCEECEETTEECCEECCSSSSSCEEEEEEEEEE
T ss_pred ceEEEecCCceeEeeeeeeccccCCcCCceeeeEEEEEEecc--CCCceEEEeeccccceecccCCCCeeEEeccCCCEE
Confidence 45999999999999999996532 223347888888876 4578876653 3321 122223344666789
Q ss_pred EEEEEEEEeeccCCcceeeeeEEEEecc
Q 006838 331 VRYLKLNLLSHYGSEFYCTLSVVEVYGV 358 (629)
Q Consensus 331 ~RYLKle~LSHyGsE~YC~LS~vrVyG~ 358 (629)
+|||||..++.+| +-| =+|+|||=
T Consensus 129 aRyIRi~p~~w~~--~~~--mR~El~GC 152 (155)
T d2qqia2 129 TRFVRIKPATWET--GIS--MRFEVYGC 152 (155)
T ss_dssp EEEEEEEEEEEES--SCC--BEEEEEEE
T ss_pred EEEEEEEEEecCC--ceE--EEEEEecc
Confidence 9999999999986 467 38999994
No 11
>d1czsa_ b.18.1.2 (A:) C2 domain of factor V {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.49 E-value=0.06 Score=47.00 Aligned_cols=91 Identities=13% Similarity=0.180 Sum_probs=63.9
Q ss_pred CcEEEEEecceeeecEEEEeecc--cccCCCCeEEEEeeccCCCCCceee--------EEEEeec-cccceeeeCCCCce
Q 006838 262 GKFVVIELGEETLVDTVKIANFE--HYSSNFKEFELSGSLSYPTEVWSPL--------GKFVATN-VKQLQSFKLPEPKW 330 (629)
Q Consensus 262 ~kfVVIELcEeI~V~~I~IANfE--~fSS~pKdF~VsgS~~YPt~~W~~L--------G~F~a~N-~R~~Q~F~L~~~~w 330 (629)
..|+-|.|-+...|..|.+.-.. ....-++.|+|.-|.. ...|... -.|.... ......-.|++|..
T Consensus 56 ~~wlqvDlg~~~~Vtgv~tqG~~~~~~~~~vt~y~l~yS~d--g~~w~~~~~~~~~~~~~f~gn~d~~~~v~~~l~~pv~ 133 (160)
T d1czsa_ 56 KQWLEIDLLKIKKITAIITQGCKSLSSEMYVKSYTIHYSEQ--GVEWKPYRLKSSMVDKIFEGNTNTKGHVKNFFNPPII 133 (160)
T ss_dssp TCCEEEEEEEEEEEEEEEEECEEETTEEEEEEEEEEEEESS--SSSCEECCCTTCSSCCCEECCSSSSCCEEEEEEEEEE
T ss_pred cceEeccCCceEEEEEEEecCcccCCCceeEEEEEEEEEcC--CCCceEEEeceeeccceecCccCCCcEEEEecCCCeE
Confidence 45999999999999999997532 2233578899988763 4556543 1244321 12233445667789
Q ss_pred EEEEEEEEeeccCCcceeeeeEEEEecc
Q 006838 331 VRYLKLNLLSHYGSEFYCTLSVVEVYGV 358 (629)
Q Consensus 331 ~RYLKle~LSHyGsE~YC~LS~vrVyG~ 358 (629)
+|||||.-++++| +-| =+|+|||=
T Consensus 134 ARyvRi~P~~~~~--~~~--mR~ElyGC 157 (160)
T d1czsa_ 134 SRFIRVIPKTWNQ--SIT--LRLELFGC 157 (160)
T ss_dssp EEEEEEEEEEEES--SCE--EEEEEEEE
T ss_pred EEEEEEEEEEeCC--ccE--EEEEEeeE
Confidence 9999999999987 466 58999994
No 12
>d1sddb3 b.18.1.2 (B:1863-2024) C2 domain of factor V {Cow (Bos taurus) [TaxId: 9913]}
Probab=94.44 E-value=0.062 Score=47.03 Aligned_cols=91 Identities=16% Similarity=0.322 Sum_probs=64.4
Q ss_pred CcEEEEEecceeeecEEEEeeccc--ccCCCCeEEEEeeccCCCCCceeeE--------EEEeec-cccceeeeCCCCce
Q 006838 262 GKFVVIELGEETLVDTVKIANFEH--YSSNFKEFELSGSLSYPTEVWSPLG--------KFVATN-VKQLQSFKLPEPKW 330 (629)
Q Consensus 262 ~kfVVIELcEeI~V~~I~IANfE~--fSS~pKdF~VsgS~~YPt~~W~~LG--------~F~a~N-~R~~Q~F~L~~~~w 330 (629)
..|+-|.|-+...|..|.+.=... ...-++.|.|.-|.. ...|...- .|.... ........|+.|..
T Consensus 57 ~qwlqVDlg~~~~Vtgv~tqG~~~~~~~~~vt~y~l~yS~d--g~~w~~~~~~~~~~~~vF~gn~d~~~~v~~~l~~pv~ 134 (162)
T d1sddb3 57 EPWIQVDMQKEVLLTGIQTQGAKHYLKPYYTTEFCVAYSLD--RKNWRIFKGNSTRNVMYFGGNSDASTIKENQIDPPVV 134 (162)
T ss_dssp CSCEEEEEEEEEEEEEEEEECEESSSSEEEEEEEEEEEESS--SSSCEECCSSCSSSSCCEECCSSSSSCEEEEEEEEEE
T ss_pred cceEEecCCcEEEEEEEEeECccCCCCceeEEEEEEEEeeC--CCeeEEeccCcccceeeccccCCCceEEEEECCCCeE
Confidence 459999999999999999963322 223578899988873 45565432 354322 22334456677889
Q ss_pred EEEEEEEEeeccCCcceeeeeEEEEecc
Q 006838 331 VRYLKLNLLSHYGSEFYCTLSVVEVYGV 358 (629)
Q Consensus 331 ~RYLKle~LSHyGsE~YC~LS~vrVyG~ 358 (629)
+|||||.-+++|| +.| =+|+|||=
T Consensus 135 aRyiRi~P~~~~~--~~~--lRvElyGC 158 (162)
T d1sddb3 135 ARYIRISPTGSYN--KPA--LRLELQGC 158 (162)
T ss_dssp EEEEEEEEEEEES--SCE--EEEEEEEE
T ss_pred EEEEEEEEEEeCC--ceE--EEEEEEce
Confidence 9999999999997 467 58999994
No 13
>d2qqia1 b.18.1.2 (A:431-586) C2 domain of factor VIII {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.37 E-value=0.08 Score=45.90 Aligned_cols=91 Identities=19% Similarity=0.267 Sum_probs=59.8
Q ss_pred CcEEEEEecceeeecEEEEeecccc--cCCCCeEEEEeeccCCCCCceeeEE--------EEeeccccceeeeCCCCceE
Q 006838 262 GKFVVIELGEETLVDTVKIANFEHY--SSNFKEFELSGSLSYPTEVWSPLGK--------FVATNVKQLQSFKLPEPKWV 331 (629)
Q Consensus 262 ~kfVVIELcEeI~V~~I~IANfE~f--SS~pKdF~VsgS~~YPt~~W~~LG~--------F~a~N~R~~Q~F~L~~~~w~ 331 (629)
..|+-|.|-+...|..|.+.=.... ...++.|.|..|. +...|..+-. |.+...+......+-+|..+
T Consensus 52 ~~wlqvDlg~~~~I~gv~~qG~~~~~~~~~v~~y~l~yS~--dg~~W~~~~~~~~~~~~vf~Gn~d~~~~~~~~~~pv~A 129 (156)
T d2qqia1 52 NEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSN--NGSDWKMIMDDSKRKAKSFEGNNNYDTPELRTFPALST 129 (156)
T ss_dssp CCCEEEEEEEEEEEEEEEEEECCCTTCCCCCCCEEEEEES--SSSSCEECBCTTSSSBCCBCCCSSSSCCEEEEEEEEEE
T ss_pred cceEEecCCcEEEEEEEEEEecCCCCCceEEEEEEEEEee--CCCeeEEEEEcccceeeccccccCCCceEEEecCCEeE
Confidence 4699999999999999999432222 2347899999986 4577865521 33211122211222247899
Q ss_pred EEEEEEEee-ccCCcceeeeeEEEEecc
Q 006838 332 RYLKLNLLS-HYGSEFYCTLSVVEVYGV 358 (629)
Q Consensus 332 RYLKle~LS-HyGsE~YC~LS~vrVyG~ 358 (629)
|||||.-++ ++| ..| =+|+|||=
T Consensus 130 RyvRi~p~~~~~~--~~~--lR~ElyGC 153 (156)
T d2qqia1 130 RFIRIYPERATHG--GLG--LRMELLGC 153 (156)
T ss_dssp EEEEEEECCCSSS--CBC--EEEEEEEE
T ss_pred EEEEEEEeeecCC--CEE--EEEEEecc
Confidence 999999875 444 356 38999994
No 14
>d1xnta_ b.18.1.8 (A:) N-terminal domain of xrcc1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.33 E-value=28 Score=30.77 Aligned_cols=110 Identities=25% Similarity=0.270 Sum_probs=71.1
Q ss_pred cccCcccccCcccccccccCC---CCcEEEEEecceeeecEEEEeecccccCCCCeEEEEeeccCC--CCCceeeEEEEe
Q 006838 240 KGASNILGKDHNKYLRNPCSV---AGKFVVIELGEETLVDTVKIANFEHYSSNFKEFELSGSLSYP--TEVWSPLGKFVA 314 (629)
Q Consensus 240 kgasnIL~~nkD~YMLnPCsa---~~kfVVIELcEeI~V~~I~IANfE~fSS~pKdF~VsgS~~YP--t~~W~~LG~F~a 314 (629)
-.|+|+|.+|. |-.=-|.+ ...+|+++|-+.-+|..|.|+| +.|+|=++.|.-|..-+ .+-|++|-....
T Consensus 19 ~~a~NLL~~~~--~rkW~~~~~gek~a~ViLQle~as~I~~IDIGN---~gSAfiEVlVgrSs~~~~~~~f~~Ll~~ssf 93 (151)
T d1xnta_ 19 HCAENLLKADT--YRKWRAAKAGEKTISVVLQLEKEEQIHSVDIGN---DGSAFVEVLVGSSAGGAGEQDYEVLLVTSSF 93 (151)
T ss_dssp TCGGGGGGSST--TCCCCCSSSSCSEEEEEEEEEEEECCSEEEEEE---EBCCEEEEEEECSSSSSCSSCCEEEEEEEEC
T ss_pred CchhhccCCCC--CCcceecCCCCeeEEEEEEeCCceecceEeecC---CCeEEEEEEEeccCCCCCCccceEEeeeecc
Confidence 45899999774 22333544 2369999999999999999999 45666555554343223 346777777776
Q ss_pred e---------ccccceeeeCC-------CCceEEEEEEEEeeccCC-cceeeeeEEEEe
Q 006838 315 T---------NVKQLQSFKLP-------EPKWVRYLKLNLLSHYGS-EFYCTLSVVEVY 356 (629)
Q Consensus 315 ~---------N~R~~Q~F~L~-------~~~w~RYLKle~LSHyGs-E~YC~LS~vrVy 356 (629)
. |..+.+.|.=. ...|-| |||--..=|.. .-|= |+-||+|
T Consensus 94 MsP~eskn~~n~nrVr~F~~~~l~~~~~~ekWdr-vkivCtQPfnk~~~yG-LsFv~~h 150 (151)
T d1xnta_ 94 MSPSESRSGSNPNRVRMFGPDKLVRAAAEKRWDR-VKIVCSQPYSKDSPFG-LSFVRFH 150 (151)
T ss_dssp CCTTHHHHCSSSSEEEEECSTTSCHHHHTSCEEE-EEEEEECCCCSSSCCE-EEEEEEE
T ss_pred cCHHHhcCcCCCceEEEechhHhchhHHhhheeE-EEEEEcCCCCCCCccc-eEEEEEe
Confidence 3 34556777633 234654 67665666665 3454 7888887
No 15
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=63.21 E-value=20 Score=28.84 Aligned_cols=84 Identities=12% Similarity=0.199 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHhhHHHHHHHH
Q 006838 478 EDYIKELNQRQQDVFPELDREITRISLLLEKSKLELEELVKWRETMERGLSDLESWKTVVSFRVNELIKENSMLRIDVEK 557 (629)
Q Consensus 478 e~YiEeln~ry~~~f~~l~~el~~~~~~Lek~~aeI~~L~e~K~~~ek~~~~l~swks~VSsqLd~l~reN~~LR~~Ve~ 557 (629)
+.+.+.+..|..+. ++ ..+-.++.....+..++.+|+..|..+.|+++... ....+.+..+...|+.++..
T Consensus 12 e~v~~~l~~R~~~~--~l-d~i~~ld~~rr~l~~~~e~l~~~rN~~sk~i~k~~------~~~~~~l~~~~k~lk~~i~~ 82 (110)
T d1seta1 12 EVFHRAIREKGVAL--DL-EALLALDREVQELKKRLQEVQTERNQVAKRVPKAP------PEEKEALIARGKALGEEAKR 82 (110)
T ss_dssp HHHHHHHHHTTCCC--CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCC------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcc--CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------ccchHHHHHHHHHHHHHHHH
Confidence 44555555554332 34 35556666666677778888888878888876432 23346677778888888888
Q ss_pred HHhhhhhhcccch
Q 006838 558 VSSDQANLESKEL 570 (629)
Q Consensus 558 v~~~q~~mEnK~l 570 (629)
+...+..++.+.-
T Consensus 83 le~~~~~~~~~l~ 95 (110)
T d1seta1 83 LEEALREKEARLE 95 (110)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8887777776544
No 16
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]}
Probab=54.80 E-value=33 Score=26.29 Aligned_cols=50 Identities=22% Similarity=0.395 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH------hHHHHHHHHHHHHHHhhhchhh
Q 006838 477 LEDYIKELNQRQQDVFPELDREITRISLLLEK------SKLELEELVKWRETMERGLSDL 530 (629)
Q Consensus 477 le~YiEeln~ry~~~f~~l~~el~~~~~~Lek------~~aeI~~L~e~K~~~ek~~~~l 530 (629)
+..||.+|...+ ..|+++|+++...|++ -+..+++|..+.+...+-+.+.
T Consensus 1 F~eYl~~L~~~~----~~L~~~i~k~~~~leknP~skK~~nk~~el~~Q~~s~~~ki~Ea 56 (65)
T d1lrza1 1 FDEYIKELNEER----DILNKDLNKALKDIEKRPENKKAHNKRDNLQQQLDANEQKIEEG 56 (65)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHH----HHHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367999999888 7888899999999887 3555777777776666555444
No 17
>d1h7ca_ a.7.5.1 (A:) Tubulin chaperone cofactor A {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.86 E-value=44 Score=27.46 Aligned_cols=41 Identities=20% Similarity=0.258 Sum_probs=33.4
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHH
Q 006838 466 KVKSLEQNLSVLEDYIKELNQRQQDVFPELDREITRISLLLEKSKLELE 514 (629)
Q Consensus 466 KvksLE~N~Slle~YiEeln~ry~~~f~~l~~el~~~~~~Lek~~aeI~ 514 (629)
|||+|.....++.|-++|.. -|+++...-..-|++++++-.
T Consensus 2 rlrqLkIktgvvkRL~KE~~--------~Y~kE~~~q~~k~ek~k~~~~ 42 (103)
T d1h7ca_ 2 RVRQIKIKTGVVRRLVKERV--------MYEKEAKQQEEKIEKMRAEDG 42 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHC
T ss_pred CcchhehHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHcCC
Confidence 78999999999999999874 467777777777888887754
No 18
>d1gs9a_ a.24.1.1 (A:) Apolipoprotein E {Human (Homo sapiens), E4 [TaxId: 9606]}
Probab=51.91 E-value=29 Score=29.06 Aligned_cols=86 Identities=13% Similarity=0.222 Sum_probs=46.0
Q ss_pred HhhhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH-hHHHHHHHHH--------HHHHHhhhchhhhhHHHHHHHH
Q 006838 470 LEQNLSVLEDYIKELNQRQQDVFPELDREITRISLLLEK-SKLELEELVK--------WRETMERGLSDLESWKTVVSFR 540 (629)
Q Consensus 470 LE~N~Slle~YiEeln~ry~~~f~~l~~el~~~~~~Lek-~~aeI~~L~e--------~K~~~ek~~~~l~swks~VSsq 540 (629)
|+-...-+..|+++|.....-...++...|++-...|.. +..++.++.+ .+..+.+.+.+ -+..+...
T Consensus 43 l~e~~~~l~~~~~~l~~~l~p~~~e~~~~l~~~~e~lr~~l~~~lee~r~kl~~~~eel~~~~~~~~ee---~r~~l~p~ 119 (144)
T d1gs9a_ 43 MDETMKELKAYKSELEEQLTPVAEETRARLSKELQAAQARLGADMEDVRGRLVQYRGEVQAMLGQSTEE---LRVRLASH 119 (144)
T ss_dssp HHHHHHHHHHHHHHHTTSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
Confidence 344556667888888877777777777766665554443 3333444433 33333333333 34555555
Q ss_pred HHHHHHHhhHHHHHHHHHHhh
Q 006838 541 VNELIKENSMLRIDVEKVSSD 561 (629)
Q Consensus 541 Ld~l~reN~~LR~~Ve~v~~~ 561 (629)
.+++.. .|...++.++..
T Consensus 120 ~eel~~---~l~~~~eel~~k 137 (144)
T d1gs9a_ 120 LRKLRK---RLLRDADDLQKR 137 (144)
T ss_dssp HHHHHH---HHHHHHHHHHHH
T ss_pred HHHHHH---HHHHHHHHHHHH
Confidence 555532 344445555543
No 19
>d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]}
Probab=51.07 E-value=40 Score=32.94 Aligned_cols=18 Identities=22% Similarity=0.540 Sum_probs=8.8
Q ss_pred HHHHHHHhhhhhHHHHHH
Q 006838 464 MQKVKSLEQNLSVLEDYI 481 (629)
Q Consensus 464 mqKvksLE~N~Slle~Yi 481 (629)
.++++.|..-+..|..|+
T Consensus 5 ~~~i~eL~~rl~~Lr~~f 22 (362)
T d1gqea_ 5 NNRIQDLTERSDVLRGYL 22 (362)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 344555555555555543
No 20
>d1vcsa1 a.47.2.1 (A:8-96) Vesicle transport v-SNARE protein Vti1-like 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=48.20 E-value=16 Score=29.31 Aligned_cols=56 Identities=20% Similarity=0.318 Sum_probs=33.8
Q ss_pred hhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 006838 491 VFPELDREITRISLLLEKSKLELEELVKWRETMERGLSDLESWKTVVSFRVNELIKENSMLRIDVEKVS 559 (629)
Q Consensus 491 ~f~~l~~el~~~~~~Lek~~aeI~~L~e~K~~~ek~~~~l~swks~VSsqLd~l~reN~~LR~~Ve~v~ 559 (629)
++.++++.+.....+|+.|..|++++- -+-|+.+.++|.+-.+|...|+.++.+.+
T Consensus 32 ~l~~ie~~leEA~ell~qMelEvr~~p-------------~s~R~~~~~klr~Yk~dl~~lk~elk~a~ 87 (89)
T d1vcsa1 32 MVANVEKQLEEARELLEQMDLEVREIP-------------PQSRGMYSNRMRSYKQEMGKLETDFKRSR 87 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSC-------------TTTHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHhCC-------------HHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 445555555555666655544444441 13467777777777777777777765543
No 21
>d1lvfa_ a.47.2.1 (A:) Syntaxin 6, SNAP-25 homolog {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=46.36 E-value=41 Score=27.21 Aligned_cols=58 Identities=14% Similarity=0.184 Sum_probs=31.5
Q ss_pred HHhhhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Q 006838 469 SLEQNLSVLEDYIKELNQRQQDVFPELDREITRISLLLEKSKLELEELVKWRETMERG 526 (629)
Q Consensus 469 sLE~N~Slle~YiEeln~ry~~~f~~l~~el~~~~~~Lek~~aeI~~L~e~K~~~ek~ 526 (629)
+|..-.++..+|++.++.--+..=+++..-...+...|+.++.+|.+|.+-=..+++.
T Consensus 14 s~~~~~~l~~~w~~~~~~~~~~~~~e~~~~~~eL~~~l~siewdL~dLe~av~~ve~n 71 (106)
T d1lvfa_ 14 AVNTAQGLFQRWTELLQGPSAATREEIDWTTNELRNNLRSIEWDLEDLDETISIVEAN 71 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhC
Confidence 3444455666666655432222224444445555566667777777776655555543
No 22
>d1i4da_ a.238.1.2 (A:) Arfaptin, Rac-binding fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.98 E-value=75 Score=26.12 Aligned_cols=85 Identities=12% Similarity=0.058 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhHHH---HHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHhhHHHH
Q 006838 477 LEDYIKELNQRQQDVFPELDREITRISLLLEKSKLE---LEELVKWRETMERGLSDLESWKTVVSFRVNELIKENSMLRI 553 (629)
Q Consensus 477 le~YiEeln~ry~~~f~~l~~el~~~~~~Lek~~ae---I~~L~e~K~~~ek~~~~l~swks~VSsqLd~l~reN~~LR~ 553 (629)
+..++.++...|...|+++.+.+.+..........- +..+..-+ .-.+....+..+...+..--.....-+..+..
T Consensus 85 ~~~~~~~l~~~~~~~~~~~~~~~kk~~~~~~dyd~~~~k~~~~~~~~-~~~~~~~kl~~ae~~~~~a~~~fe~~~~~~~~ 163 (200)
T d1i4da_ 85 VNFFVSSINTLVTKTMEDTLMTVKQYEAARLEYDAYRTDLEELSLGP-RDAGTRGRLESAQATFQAHRDKYEKLRGDVAI 163 (200)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhcc-cccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666777666766666555555444443222 22221111 11222334555555555555555555566666
Q ss_pred HHHHHHhhh
Q 006838 554 DVEKVSSDQ 562 (629)
Q Consensus 554 ~Ve~v~~~q 562 (629)
+|+.+....
T Consensus 164 ~l~~l~~~r 172 (200)
T d1i4da_ 164 KLKFLEENK 172 (200)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 666666544
No 23
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=45.48 E-value=71 Score=25.67 Aligned_cols=68 Identities=13% Similarity=0.166 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhh
Q 006838 494 ELDREITRISLLLEKSKLELEELVKWRETMERGLSDLESWKTVVSFRVNELIKENSMLRIDVEKVSSD 561 (629)
Q Consensus 494 ~l~~el~~~~~~Lek~~aeI~~L~e~K~~~ek~~~~l~swks~VSsqLd~l~reN~~LR~~Ve~v~~~ 561 (629)
++=.+...+-..|+.++..+..|.+....+-.......+-+..+...+++..+-...++.+++.+...
T Consensus 7 ~Ff~eV~~Ir~~I~~i~~~v~~i~~~~~~~l~~~~~~~~~~~~l~~~~~~i~~~a~~ik~~Lk~l~~~ 74 (124)
T d1ez3a_ 7 EFFEQVEEIRGFIDKIAENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQS 74 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444555555555555555555444443344445556666666667777777777777777543
No 24
>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}
Probab=41.43 E-value=16 Score=37.31 Aligned_cols=35 Identities=9% Similarity=0.202 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhhhhhhcccchhH
Q 006838 538 SFRVNELIKENSMLRIDVEKVSSDQANLESKELAV 572 (629)
Q Consensus 538 SsqLd~l~reN~~LR~~Ve~v~~~q~~mEnK~laV 572 (629)
...+++++.+...++.++.+++.+...+.|+-...
T Consensus 373 ~~e~~~l~~~~~~~~~~~~~~~~~~~~~fn~~~Gs 407 (458)
T d2bdea1 373 DQEIHDLQLQISTVDLQISRLLQEQNSFYNPKWER 407 (458)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhh
Confidence 34677888889999999999999999888876543
No 25
>d1xoya_ b.18.1.26 (A:) Hypothetical protein AT3g04780/F7O18_27 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=39.75 E-value=53 Score=28.72 Aligned_cols=100 Identities=14% Similarity=0.186 Sum_probs=65.1
Q ss_pred CcccccccccCCCCcEEEEEecceeeecEEEEeecccccCCCCeEEEEeeccCCCCCceeeEEEE-eeccccceeeeCC-
Q 006838 249 DHNKYLRNPCSVAGKFVVIELGEETLVDTVKIANFEHYSSNFKEFELSGSLSYPTEVWSPLGKFV-ATNVKQLQSFKLP- 326 (629)
Q Consensus 249 nkD~YMLnPCsa~~kfVVIELcEeI~V~~I~IANfE~fSS~pKdF~VsgS~~YPt~~W~~LG~F~-a~N~R~~Q~F~L~- 326 (629)
+...|+-.-|.. +=-+-|-+-..+.|..|.|..-+ .++||.++++.-. |. |+ |. |+.....|.+.+.
T Consensus 47 ~~~~~l~SD~D~-QLii~IpF~~~Vkl~si~i~~~~--~~~Pk~iklf~N~--~~-----id-F~~a~~~~p~q~iel~~ 115 (161)
T d1xoya_ 47 DEGLNLESDADE-QLLIYIPFNQVIKLHSFAIKGPE--EEGPKTVKFFSNK--EH-----MC-FSNVNDFPPSDTAELTE 115 (161)
T ss_dssp TTTCCEECSSCS-SEEEEEEEEEEECEEEEEEECCT--TTSEEEEEEEESC--SC-----CC-HHHHTTSCCSEEECCCT
T ss_pred CCCceEecCCCh-heEEEeecCCceEEEEEEEeCCC--CCCCcEEEEEeCC--Cc-----CC-cchhhhCCccceEEeCC
Confidence 344566665654 44667788999999999998765 4789999999853 21 21 22 1222333444443
Q ss_pred -----------CCce--EEEEEEEEeeccCCcceeeeeEEEEeccc
Q 006838 327 -----------EPKW--VRYLKLNLLSHYGSEFYCTLSVVEVYGVD 359 (629)
Q Consensus 327 -----------~~~w--~RYLKle~LSHyGsE~YC~LS~vrVyG~t 359 (629)
--+| ++-|-|=|-+++|.+..--|+.++++|.+
T Consensus 116 ~~~~~~~~~L~~~kFqnV~sLtif~~~N~~g~e~T~I~~I~l~Ges 161 (161)
T d1xoya_ 116 ENLKGKPVVLKYVKFQNVRSLTIFIEANQSGSEVTKVQKIALYGST 161 (161)
T ss_dssp TGGGTCCEECCTTTCSCEEEEEEEEEEETTCCSCCEESEEEEEECC
T ss_pred ccCCceEEeecceeeccccEEEEEEeCCCCCCceEEEEEEEEEecC
Confidence 2322 66677878899866555568999999974
No 26
>d2elba1 a.238.1.1 (A:6-273) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.38 E-value=1.3e+02 Score=26.51 Aligned_cols=84 Identities=17% Similarity=0.141 Sum_probs=49.3
Q ss_pred hHHHHHHHHHHHHHHhhhchhhhhHHHHHHHH---------HHHHHHHhhHHHHHHHHHHhh----hhhh---cccchhH
Q 006838 509 SKLELEELVKWRETMERGLSDLESWKTVVSFR---------VNELIKENSMLRIDVEKVSSD----QANL---ESKELAV 572 (629)
Q Consensus 509 ~~aeI~~L~e~K~~~ek~~~~l~swks~VSsq---------Ld~l~reN~~LR~~Ve~v~~~----q~~m---EnK~laV 572 (629)
++.+|+...+.|...+|.-.++.+|....... .++...+....|..-+..+-+ +..+ ...+++-
T Consensus 114 ~~~di~~~ke~kk~fek~~~~yd~~l~k~~~~~k~k~~~~~~~Ea~~~l~~~r~~f~~~~~d~~~~l~~l~~~k~~~~l~ 193 (268)
T d2elba1 114 KERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKRENDKVKYEVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKIALLE 193 (268)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678888888889888888888887777421 122233333334433333322 1122 2345555
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 006838 573 LSVSLFFACFAIFKLVSARL 592 (629)
Q Consensus 573 l~isl~f~~la~~~l~~~~~ 592 (629)
.+++++-+.+.+++-..+.+
T Consensus 194 ~l~~~~~a~~~ff~~~~~~l 213 (268)
T d2elba1 194 PLLGYMQAQISFFKMGSENL 213 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 66777777777777555543
No 27
>d1gs9a_ a.24.1.1 (A:) Apolipoprotein E {Human (Homo sapiens), E4 [TaxId: 9606]}
Probab=30.35 E-value=89 Score=25.79 Aligned_cols=17 Identities=18% Similarity=0.292 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHhhhhh
Q 006838 477 LEDYIKELNQRQQDVFP 493 (629)
Q Consensus 477 le~YiEeln~ry~~~f~ 493 (629)
+-.|+.++...=..++.
T Consensus 12 f~~y~~~l~~~a~~~~~ 28 (144)
T d1gs9a_ 12 FWDYLRWVQTLSEQVQE 28 (144)
T ss_dssp HHHHHHHHHHCCHHHHH
T ss_pred HHHHHHHHHHhHHHHHH
Confidence 44455444444333333
No 28
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=28.93 E-value=86 Score=24.88 Aligned_cols=19 Identities=5% Similarity=0.310 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHhhHHHHHH
Q 006838 537 VSFRVNELIKENSMLRIDV 555 (629)
Q Consensus 537 VSsqLd~l~reN~~LR~~V 555 (629)
+..|+..+..+...++..+
T Consensus 84 l~~q~~~l~~~l~~~~~~l 102 (107)
T d1fxka_ 84 IERQEERVMKKLQEMQVNI 102 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3334444444444443333
No 29
>d2clya1 f.52.1.1 (A:79-183) ATP synthase subunit b, mitochondrial {Cow (Bos taurus) [TaxId: 9913]}
Probab=28.10 E-value=1.2e+02 Score=24.85 Aligned_cols=56 Identities=11% Similarity=0.090 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHhHHH-HHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHhhHHHHHHH
Q 006838 496 DREITRISLLLEKSKLE-LEELVKWRETMERGLSDLESWKTVVSFRVNELIKENSMLRIDVE 556 (629)
Q Consensus 496 ~~el~~~~~~Lek~~ae-I~~L~e~K~~~ek~~~~l~swks~VSsqLd~l~reN~~LR~~Ve 556 (629)
|+...++...|+..|.. |..+.+.=+... -..|.......|=++.|+|.+|-.+..
T Consensus 5 Dk~~~~~~~~l~~~r~~~i~~l~~~Ie~~k-----~~q~~~~~~~~Lfda~kEnvalqlEa~ 61 (105)
T d2clya1 5 DKLNEQKIAQLEEVKQASIKQIQDAIDMEK-----SQQALVQKRHYLFDVQRNNIAMALEVT 61 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHTGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555566666665544 555543332222 234666666667777777777766553
No 30
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.21 E-value=30 Score=26.52 Aligned_cols=55 Identities=20% Similarity=0.381 Sum_probs=30.1
Q ss_pred hhhhhHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHhhHHHHHHHHH
Q 006838 489 QDVFPELDR-EITRISLLLEKSKLELEELVKWRETMERGLSDLESWKTVVSFRVNELIKENSMLRIDVEKV 558 (629)
Q Consensus 489 ~~~f~~l~~-el~~~~~~Lek~~aeI~~L~e~K~~~ek~~~~l~swks~VSsqLd~l~reN~~LR~~Ve~v 558 (629)
+..+|.... .+++. ..|+....-|+.|++...... .+++.+.+++..|+.+|+.+
T Consensus 25 ~~llP~~~~~k~sK~-~iL~~A~~yI~~L~~~~~~l~--------------~~~~~l~~~~~~L~~~l~~L 80 (83)
T d1nkpb_ 25 RDSVPSLQGEKASRA-QILDKATEYIQYMRRKNHTHQ--------------QDIDDLKRQNALLEQQVRAL 80 (83)
T ss_dssp HTTSGGGTTSCCCHH-HHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHTC
T ss_pred HHHhCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHh
Confidence 345565533 34443 344554466777755443333 34456777777777777543
No 31
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.60 E-value=56 Score=25.19 Aligned_cols=56 Identities=18% Similarity=0.319 Sum_probs=30.6
Q ss_pred hhhhhHHHH--HHHHHHHHHHHhHHHHHHHHHHHHHHhhhchhhhhHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 006838 489 QDVFPELDR--EITRISLLLEKSKLELEELVKWRETMERGLSDLESWKTVVSFRVNELIKENSMLRIDVEKVS 559 (629)
Q Consensus 489 ~~~f~~l~~--el~~~~~~Lek~~aeI~~L~e~K~~~ek~~~~l~swks~VSsqLd~l~reN~~LR~~Ve~v~ 559 (629)
.+.+|.+.. .+++. ..|.....-|+.|++.-+.. ..+.+.+.+++..|+.++++++
T Consensus 29 r~llP~~~~~~k~sK~-~iL~~A~~yI~~L~~~~~~l--------------~~~~~~l~~~~~~L~~~l~~L~ 86 (88)
T d1nkpa_ 29 RDQIPELENNEKAPKV-VILKKATAYILSVQAEEQKL--------------ISEEDLLRKRREQLKHKLEQLG 86 (88)
T ss_dssp HTTCGGGTTCTTCCHH-HHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhCCCCCCCCccCHH-HHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHhc
Confidence 445565543 24444 44555546677775543222 2345666677777777776553
No 32
>d1y2oa1 a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.07 E-value=2.6e+02 Score=24.17 Aligned_cols=112 Identities=12% Similarity=0.132 Sum_probs=0.0
Q ss_pred hhHHHHHHHH----HHHHhhhhhHHHHHHHHHH---HHHhhhhhHHHH------HHHHHHHHHHHhHHHHHHHHHHHHHH
Q 006838 457 DTVLRILMQK----VKSLEQNLSVLEDYIKELN---QRQQDVFPELDR------EITRISLLLEKSKLELEELVKWRETM 523 (629)
Q Consensus 457 dSVlKiLmqK----vksLE~N~Slle~YiEeln---~ry~~~f~~l~~------el~~~~~~Lek~~aeI~~L~e~K~~~ 523 (629)
|++|+.+|.+ +|.|=....-+.+=+..++ ..|+++|.++-. +-..+...|.++-..++++.+.++.+
T Consensus 14 ~~~~~~~l~~~np~~k~li~~~k~y~~a~~~~~~a~~~f~dal~~~~~~~~~~~~~~~ig~~L~~~~~~~~~i~~~~~~l 93 (248)
T d1y2oa1 14 ENVYKTIMEQFNPSLRNFIAMGKNYEKALAGVTYAAKGYFDALVKMGELASESQGSKELGDVLFQMAEVHRQIQNQLEEM 93 (248)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred hhhchh---------hhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhhhhccc
Q 006838 524 ERGLSD---------LESWKTVVSFRVNELIKENSMLRIDVEKVSSDQANLESK 568 (629)
Q Consensus 524 ek~~~~---------l~swks~VSsqLd~l~reN~~LR~~Ve~v~~~q~~mEnK 568 (629)
...+.+ ++.|...|..-.....++-..++.++++.+.+...+..|
T Consensus 94 ~~~~~~~~i~PL~~~~~~d~k~i~~~kK~~~k~~k~~~~~l~K~~~~~~k~~kk 147 (248)
T d1y2oa1 94 LKSFHNELLTQLEQKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKK 147 (248)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Done!