Query 006839
Match_columns 629
No_of_seqs 580 out of 3569
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 10:20:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006839.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006839hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3icu_A E3 ubiquitin-protein li 99.9 1E-22 3.4E-27 192.8 17.9 128 47-184 53-186 (194)
2 1z1y_A Ookinete surface protei 99.7 2.6E-17 9E-22 157.7 4.1 144 388-560 17-178 (186)
3 2vj3_A Neurogenic locus notch 99.7 3.4E-16 1.2E-20 141.8 11.2 114 413-560 2-118 (135)
4 1yo8_A Thrombospondin-2; EGF, 99.6 5E-16 1.7E-20 172.4 8.6 120 417-560 2-145 (634)
5 2bou_A EGF-like module contain 99.6 9.2E-16 3.2E-20 140.4 7.4 113 435-563 11-140 (143)
6 1uzk_A Fibrillin-1; glycoprote 99.6 3.8E-16 1.3E-20 146.1 4.0 127 417-560 2-162 (162)
7 2w86_A Fibrillin-1, fibrillin1 99.6 1.5E-16 5E-21 146.4 0.5 124 417-560 3-147 (147)
8 1dx5_I Thrombomodulin; serine 99.6 5.1E-16 1.7E-20 137.1 3.6 114 417-559 3-118 (118)
9 4d90_A EGF-like repeat and dis 99.5 2.3E-14 7.8E-19 131.0 9.2 113 419-563 1-135 (143)
10 1yo8_A Thrombospondin-2; EGF, 99.5 6.8E-14 2.3E-18 155.4 11.7 144 388-561 16-195 (634)
11 1z1y_A Ookinete surface protei 99.4 7.8E-14 2.7E-18 133.4 3.4 109 437-562 16-137 (186)
12 1lmj_A Fibrillin 1; EGF, calci 99.4 2E-13 6.7E-18 113.3 4.3 80 471-560 3-86 (86)
13 1emn_A Fibrillin; extracellula 99.4 5.5E-13 1.9E-17 109.5 6.3 80 465-559 1-81 (82)
14 2w2n_E LDL receptor, low-densi 99.3 2.1E-13 7.2E-18 117.8 1.8 82 464-560 25-107 (107)
15 2vj3_A Neurogenic locus notch 99.3 3E-12 1E-16 115.7 8.2 109 388-529 20-132 (135)
16 2bou_A EGF-like module contain 99.3 2.3E-12 7.9E-17 117.7 7.3 109 396-523 19-143 (143)
17 1z6c_A Vitamin K-dependent pro 99.2 6.6E-12 2.2E-16 104.3 3.5 80 471-562 3-86 (87)
18 3iib_A Peptidase M28; YP_92679 99.2 1.2E-10 4E-15 126.3 13.7 205 35-307 79-301 (444)
19 1x7a_L Coagulation factor IX, 99.2 1.9E-11 6.6E-16 111.7 5.4 84 464-564 43-129 (146)
20 1n7d_A LDL receptor, low-densi 99.1 1.3E-10 4.5E-15 133.3 11.1 126 409-562 245-374 (699)
21 1emn_A Fibrillin; extracellula 99.1 8.1E-11 2.8E-15 96.5 6.8 80 412-516 1-81 (82)
22 1lmj_A Fibrillin 1; EGF, calci 99.1 4.8E-11 1.6E-15 98.8 5.2 77 417-512 2-80 (86)
23 1aut_L Activated protein C; se 99.1 1E-10 3.4E-15 102.3 6.2 88 466-564 3-97 (114)
24 3p5b_L Low density lipoprotein 99.1 7.1E-11 2.4E-15 126.6 5.3 80 472-563 1-81 (400)
25 1uzk_A Fibrillin-1; glycoprote 99.0 5.1E-11 1.7E-15 111.1 2.6 108 387-512 15-156 (162)
26 3m0c_C LDL receptor, low-densi 99.0 1.4E-10 4.8E-15 134.1 6.6 127 409-563 263-393 (791)
27 1nfu_B Coagulation factor XA, 99.0 6E-11 2.1E-15 113.0 2.4 83 464-563 37-123 (195)
28 1z6c_A Vitamin K-dependent pro 99.0 2.9E-10 9.8E-15 94.3 5.9 82 417-520 2-87 (87)
29 1tpg_A T-plasminogen activator 99.0 2.2E-10 7.6E-15 95.7 4.9 82 445-562 1-87 (91)
30 2vh0_B Activated factor XA lig 99.0 1E-10 3.6E-15 105.3 2.7 84 464-564 37-124 (134)
31 2ek8_A Aminopeptidase; metallo 99.0 3.4E-09 1.2E-13 114.2 14.4 166 61-293 90-258 (421)
32 1x7a_L Coagulation factor IX, 98.9 4.3E-10 1.5E-14 102.7 4.5 85 411-522 43-130 (146)
33 3v65_B Low-density lipoprotein 98.9 2.3E-10 7.7E-15 122.0 2.2 81 471-563 3-85 (386)
34 4d90_A EGF-like repeat and dis 98.9 1.8E-09 6.3E-14 98.2 7.8 96 388-512 13-130 (143)
35 2c4f_L Coagulation factor VII 98.9 7.5E-10 2.6E-14 100.7 4.9 84 464-564 42-132 (142)
36 1aut_L Activated protein C; se 98.9 1.2E-09 4.2E-14 95.4 5.5 95 417-537 5-108 (114)
37 3fed_A Glutamate carboxypeptid 98.9 3.3E-09 1.1E-13 120.0 10.4 108 60-173 123-268 (707)
38 2w2n_E LDL receptor, low-densi 98.9 9.1E-10 3.1E-14 94.9 3.6 77 410-512 24-101 (107)
39 3h5c_B Vitamin K-dependent pro 98.8 3.2E-09 1.1E-13 110.0 7.2 76 472-562 6-85 (317)
40 2vj2_A Jagged-1; signalling, p 98.8 3.7E-09 1.3E-13 99.1 6.7 117 396-560 50-168 (169)
41 1dx5_I Thrombomodulin; serine 98.8 1.9E-09 6.6E-14 94.7 3.1 95 387-512 14-112 (118)
42 4fbr_A Lectin, myxobacterial h 98.8 4.6E-11 1.6E-15 118.3 -9.2 147 388-551 45-263 (267)
43 2w86_A Fibrillin-1, fibrillin1 98.8 1.5E-09 5.2E-14 99.3 1.4 104 388-512 16-141 (147)
44 3p5b_L Low density lipoprotein 98.7 8.3E-09 2.8E-13 110.4 6.8 80 419-521 1-82 (400)
45 3v65_B Low-density lipoprotein 98.7 1.9E-09 6.4E-14 114.9 1.5 83 417-521 2-86 (386)
46 1nfu_B Coagulation factor XA, 98.7 2.9E-09 1E-13 101.4 0.8 83 412-520 38-123 (195)
47 3h5c_B Vitamin K-dependent pro 98.7 2.1E-08 7.1E-13 103.8 6.9 83 417-524 4-90 (317)
48 2vh0_B Activated factor XA lig 98.6 5.1E-09 1.8E-13 94.1 0.8 84 412-521 38-124 (134)
49 2c4f_L Coagulation factor VII 98.6 2.7E-08 9.2E-13 90.3 5.1 83 412-521 43-132 (142)
50 4fbr_A Lectin, myxobacterial h 98.6 4.2E-10 1.4E-14 111.4 -8.2 135 386-552 3-197 (267)
51 1tpg_A T-plasminogen activator 98.6 5.6E-08 1.9E-12 81.0 5.7 86 395-521 1-90 (91)
52 3kas_A Transferrin receptor pr 98.6 1.2E-07 4.1E-12 106.3 10.1 102 61-172 105-230 (640)
53 3fcs_B Integrin beta-3; beta p 98.6 1.2E-07 3.9E-12 107.1 9.7 122 392-553 451-596 (690)
54 3m0c_C LDL receptor, low-densi 98.5 1.4E-07 4.7E-12 109.1 7.3 84 417-523 311-396 (791)
55 1n7d_A LDL receptor, low-densi 98.4 4.1E-07 1.4E-11 104.2 7.8 83 417-522 293-377 (699)
56 1apq_A Complement protease C1R 98.3 3.4E-07 1.2E-11 67.9 4.1 42 517-561 2-52 (53)
57 2ygq_A WIF-1, WNT inhibitory f 98.3 4E-07 1.4E-11 94.2 5.6 107 395-551 164-270 (324)
58 2ygq_A WIF-1, WNT inhibitory f 98.3 3.1E-07 1E-11 95.0 3.6 115 395-563 196-310 (324)
59 2jkh_L Factor X light chain; p 98.2 4.3E-07 1.5E-11 67.9 3.0 46 418-475 1-46 (55)
60 1kli_L Factor VIIA; extrinsic 98.2 5.6E-07 1.9E-11 70.5 3.2 47 417-475 4-51 (69)
61 1kli_L Factor VIIA; extrinsic 98.1 1.2E-06 4E-11 68.7 3.5 46 516-564 2-49 (69)
62 2jkh_L Factor X light chain; p 98.1 1.1E-06 3.7E-11 65.7 2.9 43 519-564 1-44 (55)
63 3fcs_B Integrin beta-3; beta p 98.1 2.6E-06 8.8E-11 96.1 6.8 94 435-553 444-556 (690)
64 3i6s_A Subtilisin-like proteas 98.1 3.3E-06 1.1E-10 95.2 7.7 95 67-183 260-356 (649)
65 2gy5_A Angiopoietin-1 receptor 98.1 5.4E-06 1.9E-10 88.7 8.6 120 396-562 185-321 (423)
66 1edm_B Factor IX; epidermal gr 98.0 3.9E-06 1.3E-10 57.8 4.1 38 517-560 1-38 (39)
67 1kig_L Factor XA; glycoprotein 98.0 3.8E-06 1.3E-10 61.6 3.1 42 421-474 1-42 (51)
68 2kl7_A Fibulin-4; secreted, ca 97.9 6.2E-06 2.1E-10 65.0 3.6 28 517-545 1-29 (71)
69 3k6s_B Integrin beta-2; cell r 97.9 9.4E-06 3.2E-10 91.3 5.9 120 396-553 446-588 (687)
70 1apq_A Complement protease C1R 97.8 1E-05 3.5E-10 59.7 3.3 42 417-468 3-52 (53)
71 2bz6_L Blood coagulation facto 97.8 9.6E-06 3.3E-10 59.9 2.8 43 421-475 2-45 (53)
72 1xf1_A C5A peptidase, SCP; hyd 97.7 8.1E-05 2.8E-09 87.5 10.9 62 96-169 281-343 (926)
73 2k2s_B Micronemal protein 6; m 97.7 9.8E-06 3.4E-10 61.5 1.8 34 516-551 8-43 (61)
74 1kig_L Factor XA; glycoprotein 97.7 1.3E-05 4.5E-10 58.7 2.2 36 526-564 6-41 (51)
75 2wph_E Coagulation factor IXA 97.7 2.6E-05 9E-10 58.9 3.9 39 421-469 2-41 (59)
76 1gl4_A Nidogen-1, entactin; im 97.7 7.6E-06 2.6E-10 81.4 0.5 43 517-562 3-46 (285)
77 1y9z_A Alkaline serine proteas 97.6 6.7E-05 2.3E-09 81.0 7.8 74 95-180 273-355 (441)
78 3u7u_G Neuregulin 1; signaling 97.6 2.7E-05 9.2E-10 57.8 3.1 41 517-563 6-51 (55)
79 2vj2_A Jagged-1; signalling, p 97.6 5.2E-05 1.8E-09 70.6 5.0 82 395-512 82-166 (169)
80 1egf_A Epidermal growth factor 97.5 6.6E-05 2.3E-09 55.4 4.0 41 518-563 2-46 (53)
81 2bz6_L Blood coagulation facto 97.5 5.5E-05 1.9E-09 55.8 2.8 40 522-564 2-43 (53)
82 2wph_E Coagulation factor IXA 97.4 9.3E-05 3.2E-09 55.9 3.3 36 526-564 7-43 (59)
83 3u7u_G Neuregulin 1; signaling 97.4 9E-05 3.1E-09 54.9 3.1 43 411-468 2-49 (55)
84 1szb_A Mannose binding lectin- 97.4 5.6E-05 1.9E-09 70.4 2.1 52 506-562 113-168 (170)
85 1n1i_A Merozoite surface prote 97.3 0.00018 6.3E-09 59.6 4.8 71 491-563 21-97 (105)
86 2kl7_A Fibulin-4; secreted, ca 97.3 0.00017 5.9E-09 56.6 4.0 40 417-462 2-41 (71)
87 1gl4_A Nidogen-1, entactin; im 97.3 2.9E-05 9.8E-10 77.3 -1.2 43 417-469 4-46 (285)
88 1n1i_A Merozoite surface prote 97.2 0.00037 1.3E-08 57.8 5.4 61 435-509 20-84 (105)
89 1edm_B Factor IX; epidermal gr 97.2 0.00015 5.2E-09 49.6 2.6 32 417-457 2-33 (39)
90 1ob1_C Major merozoite surface 97.2 0.00021 7E-09 59.0 3.2 68 491-560 15-93 (99)
91 2gy5_A Angiopoietin-1 receptor 97.2 0.00032 1.1E-08 74.9 5.6 81 444-553 183-274 (423)
92 1ob1_C Major merozoite surface 97.1 0.0004 1.4E-08 57.2 4.5 63 435-509 14-83 (99)
93 2k2s_B Micronemal protein 6; m 96.9 0.00022 7.6E-09 54.0 0.9 44 417-475 10-55 (61)
94 1k36_A Epiregulin; EGF-like fo 96.9 0.00055 1.9E-08 48.7 2.9 38 518-561 2-43 (46)
95 1nzi_A Complement C1S componen 96.8 0.00057 2E-08 62.6 3.2 51 506-561 106-158 (159)
96 1a3p_A Epidermal growth factor 96.8 0.00094 3.2E-08 47.3 3.6 36 521-561 2-41 (45)
97 3v64_C Agrin; beta propeller, 96.8 0.00043 1.5E-08 72.2 2.3 43 519-564 1-43 (349)
98 3ca7_A Protein spitz; argos, E 96.7 0.00023 7.9E-09 52.2 -0.2 43 500-562 3-49 (52)
99 1szb_A Mannose binding lectin- 96.6 0.00058 2E-08 63.4 2.0 46 412-469 120-168 (170)
100 2wg3_C Hedgehog-interacting pr 96.6 0.00037 1.2E-08 75.5 0.5 56 492-563 402-457 (463)
101 1egf_A Epidermal growth factor 96.5 0.0021 7.1E-08 47.2 3.7 40 417-468 2-44 (53)
102 3k6s_B Integrin beta-2; cell r 96.5 0.0022 7.7E-08 72.1 5.6 103 397-536 494-607 (687)
103 1hae_A Heregulin-alpha; growth 96.4 0.0011 3.6E-08 50.7 1.8 37 519-561 6-47 (63)
104 4aqs_A Laminin subunit beta-1; 96.3 0.0031 1.1E-07 69.5 5.8 56 499-560 459-524 (525)
105 2p28_B Integrin beta-2; hybrid 96.2 0.0032 1.1E-07 60.7 4.5 92 435-560 100-213 (217)
106 3f1s_B Vitamin K-dependent pro 96.1 0.0028 9.6E-08 63.9 3.8 46 417-474 1-47 (283)
107 1hae_A Heregulin-alpha; growth 96.1 0.0027 9.2E-08 48.4 2.5 42 472-525 7-55 (63)
108 3v64_C Agrin; beta propeller, 95.8 0.0032 1.1E-07 65.5 2.6 41 418-469 1-41 (349)
109 3f1s_B Vitamin K-dependent pro 95.7 0.004 1.4E-07 62.7 2.8 42 518-562 1-44 (283)
110 1nql_B Epidermal growth factor 95.7 0.0038 1.3E-07 45.8 1.8 32 526-562 12-45 (53)
111 1a3p_A Epidermal growth factor 95.5 0.01 3.4E-07 41.8 3.3 36 420-467 2-40 (45)
112 1g1s_A P-selectin; selectin, l 95.3 0.0058 2E-07 55.9 2.0 30 492-524 131-161 (162)
113 1nzi_A Complement C1S componen 95.2 0.0083 2.9E-07 54.7 2.9 45 412-468 113-158 (159)
114 2wg3_C Hedgehog-interacting pr 94.9 0.0067 2.3E-07 65.6 1.4 75 397-512 378-452 (463)
115 1k36_A Epiregulin; EGF-like fo 94.9 0.013 4.3E-07 41.6 2.3 39 417-468 2-43 (46)
116 1g1s_A P-selectin; selectin, l 94.5 0.013 4.5E-07 53.5 2.0 47 410-475 114-160 (162)
117 1ijq_A LDL receptor, low-densi 94.1 0.029 9.8E-07 57.1 3.8 41 518-561 266-316 (316)
118 4a0p_A LRP6, LRP-6, low-densit 93.9 0.028 9.5E-07 63.2 3.4 42 518-562 264-307 (628)
119 1q4g_A Prostaglandin G/H synth 93.8 0.027 9.3E-07 61.9 3.2 39 519-563 2-42 (553)
120 1ijq_A LDL receptor, low-densi 93.1 0.044 1.5E-06 55.7 3.3 41 417-467 266-315 (316)
121 3nt1_A Prostaglandin-endoperox 92.9 0.049 1.7E-06 60.1 3.4 37 519-561 1-39 (587)
122 4a0p_A LRP6, LRP-6, low-densit 92.7 0.048 1.6E-06 61.3 2.9 43 417-469 264-307 (628)
123 3sov_A LRP-6, low-density lipo 92.6 0.074 2.5E-06 54.3 4.0 42 519-563 267-311 (318)
124 3s94_A LRP-6, low-density lipo 92.5 0.05 1.7E-06 61.0 2.8 41 518-561 577-618 (619)
125 3sov_A LRP-6, low-density lipo 92.2 0.063 2.1E-06 54.8 2.9 43 417-469 266-310 (318)
126 1nql_B Epidermal growth factor 91.8 0.092 3.1E-06 38.3 2.6 31 426-468 12-44 (53)
127 3vta_A Cucumisin; subtilisin-l 91.8 0.18 6E-06 56.5 6.2 60 96-174 282-341 (621)
128 4aqs_A Laminin subunit beta-1; 91.8 0.14 4.9E-06 56.1 5.3 48 499-551 417-469 (525)
129 3s94_A LRP-6, low-density lipo 91.6 0.073 2.5E-06 59.7 2.8 42 417-468 577-618 (619)
130 1klo_A Laminin; glycoprotein; 91.2 0.19 6.5E-06 45.9 4.6 18 435-452 5-25 (162)
131 1b9w_A Protein (merozoite surf 90.9 0.21 7.3E-06 40.2 4.0 69 490-560 14-89 (95)
132 1b9w_A Protein (merozoite surf 90.7 0.46 1.6E-05 38.3 5.7 63 435-509 14-79 (95)
133 3ltf_D Protein spitz; receptor 90.2 0.11 3.7E-06 38.7 1.7 32 527-563 15-50 (58)
134 3zyj_B Netrin-G1; cell adhesio 89.6 0.17 6E-06 53.2 3.3 113 379-540 296-412 (426)
135 1q4g_A Prostaglandin G/H synth 89.6 0.16 5.3E-06 55.9 3.1 37 418-468 2-40 (553)
136 3zyj_B Netrin-G1; cell adhesio 89.1 0.26 8.9E-06 51.9 4.1 83 437-552 304-393 (426)
137 2p28_B Integrin beta-2; hybrid 88.3 0.34 1.2E-05 46.4 4.0 88 397-512 108-211 (217)
138 2fd6_A Urokinase-type plasmino 86.9 0.69 2.4E-05 39.9 4.9 51 492-561 7-63 (122)
139 3ca7_A Protein spitz; argos, E 86.6 0.32 1.1E-05 35.1 2.1 23 492-517 20-47 (52)
140 1g1t_A E-selectin; EGF, adhesi 86.0 0.25 8.6E-06 44.4 1.6 35 521-561 121-155 (157)
141 3nt1_A Prostaglandin-endoperox 86.0 0.34 1.1E-05 53.4 2.8 37 418-468 1-39 (587)
142 3cfw_A L-selectin; EGF, cell a 85.8 0.33 1.1E-05 44.0 2.3 30 492-524 131-161 (164)
143 2rnl_A Amphiregulin; AR, color 84.3 1.1 3.9E-05 32.0 4.1 39 516-560 6-48 (50)
144 3asi_A Neurexin-1-alpha; beta- 83.6 0.81 2.8E-05 48.2 4.5 40 516-561 181-222 (410)
145 3ltf_D Protein spitz; receptor 83.4 0.4 1.4E-05 35.5 1.4 23 492-517 20-47 (58)
146 3cfw_A L-selectin; EGF, cell a 83.3 0.63 2.2E-05 42.1 3.0 31 527-562 126-156 (164)
147 1xdt_R Hbegf, heparin-binding 82.3 0.55 1.9E-05 37.0 1.8 36 519-560 37-76 (79)
148 3dem_A Complement factor MAsp- 81.8 0.8 2.8E-05 45.4 3.4 41 518-561 120-164 (278)
149 1nt0_A MAsp2, mannose-binding 80.2 0.83 2.9E-05 45.6 2.9 40 518-560 119-162 (286)
150 3e50_C Protransforming growth 80.0 1.3 4.3E-05 31.7 2.9 32 526-563 14-47 (50)
151 1iox_A Betacellulin; EGF-like 78.2 1 3.5E-05 32.2 2.0 31 526-562 14-46 (50)
152 2fd6_A Urokinase-type plasmino 75.7 1.6 5.6E-05 37.5 3.0 25 527-552 2-29 (122)
153 3e50_C Protransforming growth 74.4 1.9 6.5E-05 30.8 2.5 26 492-520 19-47 (50)
154 1g1t_A E-selectin; EGF, adhesi 69.6 1.7 5.8E-05 38.7 1.7 36 410-457 114-149 (157)
155 3fby_A COMP, cartilage oligome 68.3 3.1 0.00011 44.7 3.6 40 518-560 17-59 (551)
156 3qcw_A Neurexin-1-alpha; synap 63.1 4.4 0.00015 49.1 4.0 41 515-561 613-656 (1245)
157 3asi_A Neurexin-1-alpha; beta- 61.6 4.8 0.00016 42.1 3.6 37 418-468 185-222 (410)
158 1nt0_A MAsp2, mannose-binding 61.3 3.7 0.00013 40.7 2.5 41 417-467 119-162 (286)
159 3qcw_A Neurexin-1-alpha; synap 61.2 5.4 0.00019 48.3 4.4 41 515-561 1012-1054(1245)
160 3dem_A Complement factor MAsp- 60.0 4.5 0.00015 39.8 2.8 41 417-467 120-163 (278)
161 2rnl_A Amphiregulin; AR, color 56.2 7.6 0.00026 27.6 2.7 21 492-512 23-46 (50)
162 2i9a_A Urokinase-type plasmino 56.0 10 0.00036 33.5 4.2 23 492-517 19-45 (145)
163 3gha_A Disulfide bond formatio 55.9 1.2E+02 0.0042 27.7 13.3 88 290-389 87-176 (202)
164 1iox_A Betacellulin; EGF-like 54.9 4.5 0.00015 28.8 1.3 23 492-517 19-44 (50)
165 2ygo_A WIF-1, WNT inhibitory f 53.5 7.4 0.00025 35.9 2.9 32 521-562 150-181 (188)
166 4f87_A Plycb; lysin, bacteriop 51.6 7.8 0.00027 27.8 2.1 20 153-172 52-71 (72)
167 3bci_A Disulfide bond protein 48.1 1.5E+02 0.0051 26.3 12.9 88 290-389 69-162 (186)
168 2i9a_A Urokinase-type plasmino 47.1 12 0.0004 33.2 3.0 25 527-552 14-41 (145)
169 3fl7_A Ephrin receptor; ATP-bi 46.1 6.1 0.00021 43.1 1.2 15 537-551 305-319 (536)
170 1xdt_R Hbegf, heparin-binding 42.3 14 0.00048 29.0 2.4 37 418-467 37-76 (79)
171 3fby_A COMP, cartilage oligome 40.0 26 0.00088 37.7 4.8 31 479-517 27-59 (551)
172 2ygo_A WIF-1, WNT inhibitory f 35.9 20 0.0007 33.0 2.8 19 492-512 159-177 (188)
173 4aqt_A Laminin subunit gamma-1 33.9 7.7 0.00026 40.1 -0.4 19 543-561 347-366 (375)
174 3ssb_I IMPI alpha, inducible m 32.2 9.7 0.00033 24.3 0.0 24 500-523 5-28 (32)
175 4aqb_A Mannan-binding lectin s 31.3 25 0.00086 35.8 3.1 41 518-561 120-164 (361)
176 2knc_A Integrin alpha-IIB; tra 31.0 40 0.0014 24.3 3.1 32 569-603 11-42 (54)
177 2l8s_A Integrin alpha-1; trans 28.3 32 0.0011 24.8 2.2 32 569-603 8-39 (54)
178 4b2v_A S64; toxin, ICK; NMR {S 27.7 23 0.00079 21.4 1.1 13 257-270 2-14 (32)
179 1hx2_A BSTI; beta-sheet disulf 27.2 90 0.0031 22.5 4.7 24 499-522 35-60 (60)
180 1klo_A Laminin; glycoprotein; 23.2 46 0.0016 29.7 2.9 24 527-551 2-28 (162)
181 2knc_B Integrin beta-3; transm 23.1 1.2E+02 0.0041 23.6 4.8 20 573-592 13-32 (79)
No 1
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=99.90 E-value=1e-22 Score=192.78 Aligned_cols=128 Identities=21% Similarity=0.319 Sum_probs=104.4
Q ss_pred cccccccCcCCCCCCCCceeeEeccC--CCcCCCCCCCCCCCccc-cCCCCCCcEEEEeCCC-cCHHHHHHHHHHcCCcE
Q 006839 47 SHDSAIGNFGIPQYGGSMAGAVTYPK--ENRKGCREFGDFGISFK-AKPGALPNFVLVDRGD-CFFALKVWNAQKAGASA 122 (629)
Q Consensus 47 ~~~~~~a~Fg~~~~~~~~~g~l~~~~--~~~~gC~~~~~~~~~~~-~~~~~~~~i~Lv~RG~-C~F~~K~~nAq~aGA~a 122 (629)
.+....|.||...+.+.+.|.|+++. .+.+||++++++..+.. ......++||||+||+ |+|.+|++|||++||+|
T Consensus 53 ~~~~e~a~FG~~~p~~~v~G~lv~~~~~~~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~a 132 (194)
T 3icu_A 53 WELSEEGVYGQDSPLEPVAGVLVPPDGPGALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASG 132 (194)
T ss_dssp EEEEEEEEECTTSCCSCEEEEEECBSSTTCTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSE
T ss_pred eecccccccCCCCCCCCcEEEEEecCCCCCcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcE
Confidence 46688999999999999999999875 47899999876432211 0012348999999999 99999999999999999
Q ss_pred EEEEECCC--CCceecCCCCCccccccccCcccccEEEEeHHHHHHHHHHHcCCCeEEEEEEec
Q 006839 123 VLVADDIE--EALITMDTPEEDISSAKYIENITIPSALIDKSFGETLKKALSGGEMVNVNLDWR 184 (629)
Q Consensus 123 vII~n~~~--~~~~~m~~~~~~~~~~~~~~~i~IP~~~I~~~~G~~l~~~l~~~~~v~~~~~~~ 184 (629)
|||||+.+ +.+++|..++ ..+||++||++++|+.|+++|++|..|+++|.+.
T Consensus 133 vIIyNn~~~g~~~~~m~~~~----------~~~IPsv~Is~~~G~~L~~~L~~G~~Vtvti~vg 186 (194)
T 3icu_A 133 AVIFNFPGTRNEVIPMSHPG----------AVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVG 186 (194)
T ss_dssp EEEECCTTCTTCCCCCCCTT----------CCSSEEEEECHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred EEEEeCCCCCCceeeecCCC----------CCceeEEEECHHHHHHHHHHHHCCCeEEEEEECC
Confidence 99999852 3456775321 3479999999999999999999999999998873
No 2
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.66 E-value=2.6e-17 Score=157.68 Aligned_cols=144 Identities=19% Similarity=0.497 Sum_probs=115.3
Q ss_pred eccccCCceeeeccCCCccCCCCccccCCCcccccCC--CCCCCCCcCCCccccccCC-----CceeeeeCCCCCeeEeC
Q 006839 388 RGKLEKGAVLKAICSGFEETTEPAVCLSGETNECLDN--NGGCWQDKTANVTACKDTF-----RGRVCECPLVDGVQFKG 460 (629)
Q Consensus 388 ~c~~~~~~~~c~cc~Gf~~~~~~~~C~~~d~deC~~~--~~~C~~~~~~~~~~C~n~~-----g~~~C~C~~~~G~~~~~ 460 (629)
+|....++|.|.|.+||... ++..|+ ++|+|... +.+|. +++.|+++. ++|.|.|++ ||...
T Consensus 17 ~C~~~~g~~~C~C~~G~~g~-~~~~C~--~id~C~~~~~~~~C~-----~~~~C~~~~~~~~~g~y~C~C~~--G~~g~- 85 (186)
T 1z1y_A 17 QLVQMSNHFXCMCNEGLVHL-SENTCE--EXNECXXETLGXACG-----EFGQCIENPDPAQVNMYXCGCIE--GYTLX- 85 (186)
T ss_dssp EEEECSSCEEEEECTTEEEE-ETTEEE--ECCCCSGGGTTSEEE-----TTEEEEECSSTTSSCSEEEEECT--TEEEE-
T ss_pred EeECCCCCeEeECCCCCccC-CCCccC--CCCcccCCCCCCCCC-----CCCEeecCCCCcCCCCEECCCCC--CCccC-
Confidence 57888899999999999643 456899 99999854 45697 669999998 899999999 66543
Q ss_pred CCccccccCCCCcccCCCCCCCCCCCCCCccceee----eCC-CceeeCCCCccc---CCccCCCCC--CCCCCCCCC-C
Q 006839 461 DGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACL----DSE-NGKCQCPPGFKG---DGVKSCVDI--DECKERKAC-Q 529 (629)
Q Consensus 461 dg~~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~----~~~-~~~C~C~~Gf~g---~~~~~C~di--deC~~~~~C-~ 529 (629)
+ ..|. + ++|... +|... +.|+ ++. +|.|.|++||.| ++ ..|+++ |||.. +| .
T Consensus 86 -~-~~C~-~--d~C~~~--~C~~~-------g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~-~~C~~~~~~~C~~--~C~~ 148 (186)
T 1z1y_A 86 -E-DTCV-L--DVCQYX--NCGES-------GECIVEYLSEIQSAGCSCAIGXVPNPEDE-XXCTXTGETACQL--XCNT 148 (186)
T ss_dssp -T-TEEE-E--GGGTTC--CCCTT-------EEEEEEEETTEEEEEEEECTEEEEETTTT-TEEEEEECCCCCC--CCCT
T ss_pred -C-CCCC-C--CcCcCC--CCCCC-------CEEeeCCcCCCCCceEECCCCCcccCCCC-CcceEcCCCcccc--cccc
Confidence 4 3576 4 899754 57655 7898 777 999999999998 33 349876 89983 79 6
Q ss_pred CCCCceeeCCCceeEecCCCCcccCCCCccc
Q 006839 530 CSECSCKDTWGSYECTCSGDLLYIRDHDTCI 560 (629)
Q Consensus 530 ~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~ 560 (629)
++++|+|+.|+|+|.|++||++..+.....
T Consensus 149 -~~~~C~n~~g~y~C~C~~G~~g~~~~~~~~ 178 (186)
T 1z1y_A 149 -DNEVCXNVEGVYXCQCMEGFTFDXEXNVCL 178 (186)
T ss_dssp -TTEEEEEETTEEEEEECTTCEEETTTTEEE
T ss_pred -cCcceecCCCCeeeECCCCCccCcccccCC
Confidence 789999999999999999999766555433
No 3
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.66 E-value=3.4e-16 Score=141.77 Aligned_cols=114 Identities=28% Similarity=0.720 Sum_probs=96.0
Q ss_pred ccCCCcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccc-cCCCCcccCCCCCCCCCCCCCCcc
Q 006839 413 CLSGETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCE-VSGPGKCKINNGGCWHESKDGHTY 491 (629)
Q Consensus 413 C~~~d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~-~~~~~~C~~~~~~C~~~~~~~~~~ 491 (629)
|. |+|||...+.+|. +++.|+++.++|.|.|++ ||. + ..|+ ++ ++|... +|...
T Consensus 2 c~--dideC~~~~~~C~-----~~g~C~~~~g~~~C~C~~--Gy~--G---~~C~~~~--~~C~~~--~C~~~------- 56 (135)
T 2vj3_A 2 AQ--DVDECSLGANPCE-----HAGKCINTLGSFECQCLQ--GYT--G---PRCEIDV--NECVSN--PCQND------- 56 (135)
T ss_dssp -C--CCCTTTSSSCSSS-----TTCEEEECSSSEEEECCT--TEE--S---TTSCEEC--CTTTTC--CCCSS-------
T ss_pred Cc--ccccccCCCCCCC-----CCCEeECCCCCEEEECCC--CCc--C---CcccccC--ccCCCC--CCCCC-------
Confidence 56 8999987667798 669999999999999999 664 4 4586 55 889753 67665
Q ss_pred ceeeeCC-CceeeCCCCcccCCccCCC-CCCCCCCCCCCCCCCCceeeCCCceeEecCCCCcccCCCCccc
Q 006839 492 SACLDSE-NGKCQCPPGFKGDGVKSCV-DIDECKERKACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCI 560 (629)
Q Consensus 492 ~~C~~~~-~~~C~C~~Gf~g~~~~~C~-dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~ 560 (629)
+.|++.. +|.|.|++||.|.. |+ ++|+|... +|. ++++|+++.|+|+|.|++||. |..|.
T Consensus 57 ~~C~~~~g~~~C~C~~G~~G~~---C~~~~~~C~~~-~C~-~~g~C~~~~g~~~C~C~~G~~----G~~C~ 118 (135)
T 2vj3_A 57 ATCLDQIGEFQCICMPGYEGVH---CEVNTDECASS-PCL-HNGRCLDKINEFQCECPTGFT----GHLCQ 118 (135)
T ss_dssp CEEEECSSCEEEECCTTEESSS---SCEECCTTTTC-CST-TTCEEEECSSCEEEECCTTEE----SSSSC
T ss_pred CEEeCCCCCceeeCCCCCcCCc---ceecCCcccCC-CcC-CCCEeECCCCCeEEECCCCCc----CCccC
Confidence 8899998 99999999999876 86 89999887 999 889999999999999999997 55674
No 4
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.61 E-value=5e-16 Score=172.42 Aligned_cols=120 Identities=28% Similarity=0.742 Sum_probs=100.0
Q ss_pred CcccccCCCCCCCCCcCCCccccccCCC-ceee-eeCCCCCeeEeCCCccccccCCCCcccCCCCCCCCCCCCCCccc--
Q 006839 417 ETNECLDNNGGCWQDKTANVTACKDTFR-GRVC-ECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYS-- 492 (629)
Q Consensus 417 d~deC~~~~~~C~~~~~~~~~~C~n~~g-~~~C-~C~~~~G~~~~~dg~~~C~~~~~~~C~~~~~~C~~~~~~~~~~~-- 492 (629)
++|||..+ +|. +++.|+++.+ +|+| .|++ || .+++ +.|+++ ++|...++.|.+. +
T Consensus 2 DIDeC~~n--PC~-----~gg~C~n~~~Gsy~C~~C~~--Gy--tGdg-~~CeDi--DEC~~~p~~C~~g-------g~~ 60 (634)
T 1yo8_A 2 DPDGCLSN--PCF-----PGAQCSSFPDGSWSCGFCPV--GF--LGNG-THCEDL--DECALVPDICFST-------SKV 60 (634)
T ss_dssp --CGGGGC--CSC-----TTCCEEECTTSCEEECCCCT--TB--CSCS-SSCCBC--CTTTTSCCCSCCC-------SSS
T ss_pred cccccCCC--CCC-----CCCEEecCCCCCeECCcCCC--cc--CCCC-CCcccc--ccccCCCCcccCC-------ccc
Confidence 78999754 498 6699999985 4999 9999 55 5888 889987 9999887779876 6
Q ss_pred -eeeeCC-Cceee-CCCCcccCCc------------cCCCCCCCCCCC-CCCCCCCCceeeCC----CceeEecCCCCcc
Q 006839 493 -ACLDSE-NGKCQ-CPPGFKGDGV------------KSCVDIDECKER-KACQCSECSCKDTW----GSYECTCSGDLLY 552 (629)
Q Consensus 493 -~C~~~~-~~~C~-C~~Gf~g~~~------------~~C~dideC~~~-~~C~~~~~~C~nt~----Gsy~C~C~~G~~~ 552 (629)
.|+++. +|.|. |++||.|... +.|++|+||... ++|+ ++++|+|+. |+|+|.|++||.
T Consensus 61 ~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~-~~~~Cvnt~~~~~GsY~C~C~~Gy~- 138 (634)
T 1yo8_A 61 PRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCH-KHAECIYLGHFSDPMYKCECQTGYA- 138 (634)
T ss_dssp CCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCC-TTEEEEECCTTCSSSEEEEECTTEE-
T ss_pred cceeeccCceecccCCCCcccCccccccccccccCCCcccccccccCCCcccc-cCccccccccccccceeeeccCCcc-
Confidence 799999 99999 9999997752 358999999975 7999 889999999 999999999997
Q ss_pred cCCCCccc
Q 006839 553 IRDHDTCI 560 (629)
Q Consensus 553 ~~~g~~C~ 560 (629)
+++..|.
T Consensus 139 -GdG~~Ce 145 (634)
T 1yo8_A 139 -GDGLICG 145 (634)
T ss_dssp -ESSSSEE
T ss_pred -ccCcccc
Confidence 4566775
No 5
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.60 E-value=9.2e-16 Score=140.38 Aligned_cols=113 Identities=26% Similarity=0.572 Sum_probs=92.5
Q ss_pred CccccccCCCceeeeeCCCCCeeEe-----CCCccccccCCCCcccCCC-CCCCCCCCCCCccceeeeCC-CceeeCCCC
Q 006839 435 NVTACKDTFRGRVCECPLVDGVQFK-----GDGYSHCEVSGPGKCKINN-GGCWHESKDGHTYSACLDSE-NGKCQCPPG 507 (629)
Q Consensus 435 ~~~~C~n~~g~~~C~C~~~~G~~~~-----~dg~~~C~~~~~~~C~~~~-~~C~~~~~~~~~~~~C~~~~-~~~C~C~~G 507 (629)
+++.|+++ |.|.|++ ||... .++ +.|+++ ++|.... .+|.+. +.|+++. +|.|.|++|
T Consensus 11 ~~~~C~~~---~~C~C~~--G~~g~~~~~~~~~-~~C~di--deC~~~~~~~C~~~-------~~C~n~~g~y~C~C~~G 75 (143)
T 2bou_A 11 QDSSCVNA---TACRCNP--GFSSFSEIITTPM-ETCDDI--NECATLSKVSCGKF-------SDCWNTEGSYDCVCSPG 75 (143)
T ss_dssp TTEEESSS---SCEEECT--TEECSSSSBCSTT-CCCEEC--CGGGC----CCCTT-------EEEEECSSCEEEEECTT
T ss_pred CCCEEcCC---CEEeCCC--CCcCccccccCCC-CcCCcc--ccccCCCCCCCCCC-------CEEEcCCCCeEeECCCC
Confidence 66899885 8999999 76532 234 679877 9998754 368765 8899999 999999999
Q ss_pred cccCC---------ccCCCCCCCCCCC-CCCCCCCCceeeCCCceeEecCCCCcccCCCCcccccc
Q 006839 508 FKGDG---------VKSCVDIDECKER-KACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCISKT 563 (629)
Q Consensus 508 f~g~~---------~~~C~dideC~~~-~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~~~~ 563 (629)
|.|.. ...|+|||||... ++|. ++++|+|+.|+|+|.|++||++..++..|.+..
T Consensus 76 y~g~~~~~~~~~~~~~~C~dideC~~~~~~C~-~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~~~ 140 (143)
T 2bou_A 76 YEPVSGAKTFKNESENTCQDVDECSSGQHQCD-SSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDT 140 (143)
T ss_dssp EEETTCCSCBSSGGGCCEEECCHHHHTCCCCC-TTSEEEECSSCEEEECCSSSCBCTTCCSSBTTC
T ss_pred cccCcCccccccCCCCCcCCccCccCcCCCCC-CCCEEECCCCCEEeeCCCCcccCCCCccCccCC
Confidence 99863 2359999999864 6899 889999999999999999999999999888754
No 6
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.59 E-value=3.8e-16 Score=146.09 Aligned_cols=127 Identities=29% Similarity=0.617 Sum_probs=90.6
Q ss_pred CcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCCCcccCCCCCCCCCCCCCCccceeee
Q 006839 417 ETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLD 496 (629)
Q Consensus 417 d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~ 496 (629)
|+|||.. +.+|. ++.|+|+.|+|+|.|++ ||.+..+| +.|++++.++|.....+|... ..+.|++
T Consensus 2 dideC~~-~~~C~------~~~C~n~~gsy~C~C~~--Gy~~~~~g-~~C~d~~~~~C~~~~~~c~~~-----~~~~C~~ 66 (162)
T 1uzk_A 2 DVNECLD-PTTCI------SGNCVNTPGSYICDCPP--DFELNPTR-VGCVDTRSGNCYLDIRPRGDN-----GDTACSN 66 (162)
T ss_dssp CCCGGGS-TTSSB------TSEEEEETTEEEEECCT--TCEECTTS-SBEECCCCEEEEEEC---------------CEE
T ss_pred ccccCCC-CCCCC------CCEeECCCCCEEEeCCC--CCeECCCC-CcccCCCCCcccCCCcccCCC-----CCCcccC
Confidence 7999985 34585 28999999999999999 99988888 899987322387544333210 0133443
Q ss_pred CC------------------------------CceeeCCC--CcccCC-ccCCCCCCCCCCC-CCCCCCCCceeeCCCce
Q 006839 497 SE------------------------------NGKCQCPP--GFKGDG-VKSCVDIDECKER-KACQCSECSCKDTWGSY 542 (629)
Q Consensus 497 ~~------------------------------~~~C~C~~--Gf~g~~-~~~C~dideC~~~-~~C~~~~~~C~nt~Gsy 542 (629)
.. +|.|.|++ ||+++. ...|+|||||... ++|+ + ++|+|+.|+|
T Consensus 67 ~~~~~~~~~~C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~-~-g~C~n~~gsy 144 (162)
T 1uzk_A 67 EIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQ-G-GKCINTFGSF 144 (162)
T ss_dssp EEEEEECHHHHHTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGB-T-SEEEECSSCE
T ss_pred CcCCcccCceeeCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcC-C-CEeEcCCCCE
Confidence 22 45555555 666553 2347899999875 5798 5 6999999999
Q ss_pred eEecCCCCcccCCCCccc
Q 006839 543 ECTCSGDLLYIRDHDTCI 560 (629)
Q Consensus 543 ~C~C~~G~~~~~~g~~C~ 560 (629)
+|.|++||++..++++|+
T Consensus 145 ~C~C~~Gy~g~~d~~~C~ 162 (162)
T 1uzk_A 145 QCRCPTGYYLNEDTRVCD 162 (162)
T ss_dssp EEECCTTCCBCTTTCBBC
T ss_pred EeeCCCCccCCCCCCccC
Confidence 999999999999999884
No 7
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.58 E-value=1.5e-16 Score=146.43 Aligned_cols=124 Identities=27% Similarity=0.593 Sum_probs=89.6
Q ss_pred CcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCCC---------cccCCCCCCCCCCCC
Q 006839 417 ETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPG---------KCKINNGGCWHESKD 487 (629)
Q Consensus 417 d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~---------~C~~~~~~C~~~~~~ 487 (629)
|+|||..++ |. + +.|+|++|+|+|.|++ ||....++ +.|.+.... .|......|...
T Consensus 3 dideC~~~p--C~-----n-g~C~n~~g~y~C~C~~--G~~g~~~~-~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~--- 68 (147)
T 2w86_A 3 DIDECESSP--CI-----N-GVCKNSPGSFICECSS--ESTLDPTK-TICIETIKGTCWQTVIDGRCEININGATLK--- 68 (147)
T ss_dssp CCCGGGGCC--SB-----T-SEEEEETTEEEEECCT--TEEECTTS-SBEEECCCEEEEEEEETTEEEEEEEEEECH---
T ss_pred cCccCcCCC--CC-----C-CEeECCCCCEEeECCC--CcccCCCC-CeecCCCCCcccCCCCCCccccCCCccccC---
Confidence 899998654 96 3 6999999999999999 88877777 778764211 222111111110
Q ss_pred CCccceeeeCC-----------CceeeCCCCcccCCccCCCCCCCCCCC-CCCCCCCCceeeCCCceeEecCCCCcccCC
Q 006839 488 GHTYSACLDSE-----------NGKCQCPPGFKGDGVKSCVDIDECKER-KACQCSECSCKDTWGSYECTCSGDLLYIRD 555 (629)
Q Consensus 488 ~~~~~~C~~~~-----------~~~C~C~~Gf~g~~~~~C~dideC~~~-~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~ 555 (629)
+.|.+.. .|.|.|++||++.....|+|||||... ++|. + ++|+|+.|+|+|.|++||.+..+
T Consensus 69 ----~~C~~~~g~~~g~~C~~c~~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~-~-g~C~n~~g~y~C~C~~Gy~g~~~ 142 (147)
T 2w86_A 69 ----SQCCSSLGAAWGSPCTLCQVDPICGKGYSRIKGTQCEDIDECEVFPGVCK-N-GLCVNTRGSFKCQCPSGMTLDAT 142 (147)
T ss_dssp ----HHHHTTTCSEETTTTEECCCCTTTCTTEEEEETTEEEECCHHHHSTTCSS-S-SEEEEETTEEEEECCTTCCBCTT
T ss_pred ----CccccCcCcccCCCcccCCCcccCCCccccCCCCccCccccccCCCCCCC-C-CEEECCCCCEEeeCCCCCccCCC
Confidence 1222222 378899999975322349999999865 5798 5 49999999999999999999999
Q ss_pred CCccc
Q 006839 556 HDTCI 560 (629)
Q Consensus 556 g~~C~ 560 (629)
+++|.
T Consensus 143 ~~~C~ 147 (147)
T 2w86_A 143 GRICL 147 (147)
T ss_dssp SSCBC
T ss_pred CCeeC
Confidence 99884
No 8
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.58 E-value=5.1e-16 Score=137.10 Aligned_cols=114 Identities=25% Similarity=0.644 Sum_probs=86.3
Q ss_pred CcccccCCCCCCCCCcCCCccccccC-CCceeeeeCCCCCeeEeCCCccccccCCCCcccCCCCCCCCCCCCCCccceee
Q 006839 417 ETNECLDNNGGCWQDKTANVTACKDT-FRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACL 495 (629)
Q Consensus 417 d~deC~~~~~~C~~~~~~~~~~C~n~-~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~ 495 (629)
|+|||.. ++|. +.|+|+ .++|+|.|++ ||.........|.+ +|. +++|. +.|+
T Consensus 3 dideC~~--~pC~-------~~C~~~~~g~y~C~C~~--Gy~g~~~~~~~C~~----~C~--~~~C~---------~~C~ 56 (118)
T 1dx5_I 3 PVDPCFR--ANCE-------YQCQPLDQTSYLCVCAE--GFAPIPHEPHRCQM----FCN--QTACP---------ADCD 56 (118)
T ss_dssp CCCGGGG--CCCS-------SEEEECSSSCEEEECCT--TEEEETTEEEEEEE----CCC--SSEEE---------CEEC
T ss_pred ccccCCC--CCCC-------CCCCCCCCCCEEeECCC--CccccCCCCCcccc----ccC--CCCCC---------Cccc
Confidence 7999964 4597 599999 9999999999 87655322123432 232 23443 3588
Q ss_pred eCCCceeeCCCCcccCCccCCCCCCCCCCCCCCCCCCCceeeCCCceeEecCCCCcccCC-CCcc
Q 006839 496 DSENGKCQCPPGFKGDGVKSCVDIDECKERKACQCSECSCKDTWGSYECTCSGDLLYIRD-HDTC 559 (629)
Q Consensus 496 ~~~~~~C~C~~Gf~g~~~~~C~dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~-g~~C 559 (629)
+..+|.|.|++||.++....|+|||||...++|. ++|+|+.|+|+|.|++||.+..+ +++|
T Consensus 57 ~~~~y~C~C~~Gy~~~~g~~C~dideC~~~~~C~---~~C~n~~g~y~C~C~~G~~g~~~~g~~C 118 (118)
T 1dx5_I 57 PNTQASCECPEGYILDDGFICTDIDECENGGFCS---GVCHNLPGTFECICGPDSALAGQIGTDC 118 (118)
T ss_dssp TTSTTCEECCTTEEEETTTEEEECCHHHHCSSCS---SEEEECSSSEEEEECSSSSCEEEESCCC
T ss_pred CCCCeEeECCCCccCCCCCccccccccCCCCCCc---CeEEeCCCCEEEECCCCCccCCCCCCCC
Confidence 7449999999999965334599999998744885 89999999999999999998776 6665
No 9
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.52 E-value=2.3e-14 Score=131.00 Aligned_cols=113 Identities=31% Similarity=0.761 Sum_probs=83.6
Q ss_pred ccccCCCCCCCCCcCCCccccccCC--CceeeeeCCCCCeeEeCCCccccccC-----------CCCcccCCCCCCCCCC
Q 006839 419 NECLDNNGGCWQDKTANVTACKDTF--RGRVCECPLVDGVQFKGDGYSHCEVS-----------GPGKCKINNGGCWHES 485 (629)
Q Consensus 419 deC~~~~~~C~~~~~~~~~~C~n~~--g~~~C~C~~~~G~~~~~dg~~~C~~~-----------~~~~C~~~~~~C~~~~ 485 (629)
|+|..++ |. +++.|+++. ++|.|.|++ ||. | ..|+.+ .+++|.. .+|.+.
T Consensus 1 d~C~~~p--C~-----~~g~C~~~~~~g~~~C~C~~--G~~----G-~~C~~~~~~~~~~~~c~~~~~C~~--~~C~~~- 63 (143)
T 4d90_A 1 DICDPNP--CE-----NGGICLPGLADGSFSCECPD--GFT----D-PNCSSVVEVASDEEEPTSAGPCTP--NPCHNG- 63 (143)
T ss_dssp --CCSCC--CG-----GGCEEEC-----CCEEECCT--TCC----T-TTTCSCCCCTTTTTSCCCCCTTSS--CCCCTT-
T ss_pred CcCCCCc--CC-----CCCEeeCCCCCCCEEeECCC--CCC----C-CCCccCccccccccccccCCcCCC--CCCCCC-
Confidence 5676554 87 679999875 789999999 664 4 457653 1245543 245544
Q ss_pred CCCCccceee-------eCC-CceeeCCCCcccCCccCCC-CCCCCCCCCCCCCCCCceeeCCCceeEecCCCCcccCCC
Q 006839 486 KDGHTYSACL-------DSE-NGKCQCPPGFKGDGVKSCV-DIDECKERKACQCSECSCKDTWGSYECTCSGDLLYIRDH 556 (629)
Q Consensus 486 ~~~~~~~~C~-------~~~-~~~C~C~~Gf~g~~~~~C~-dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g 556 (629)
+.|+ ++. +|.|.|++||.|.. |+ +||||... +|. ++++|+|+.|+|+|.|++||+ |
T Consensus 64 ------g~C~~~~~~~~~~~~~~~C~C~~G~~G~~---C~~~i~~C~~~-~C~-~~~~C~~~~g~~~C~C~~G~~----G 128 (143)
T 4d90_A 64 ------GTCEISEAYRGDTFIGYVCKCPRGFNGIH---CQHNINECEVE-PCK-NGGICTDLVANYSCECPGEFM----G 128 (143)
T ss_dssp ------CEEEECCCEETTEECCEEEECCTTEESTT---SCEECCTTTTC-CSC-TTCEEEEETTEEEEECCTTCB----S
T ss_pred ------CEecCCCccccCCCCCeEeECcCCCcCCC---cccCCCcCCCC-CCC-CCCEeECCCCCeEeECCCCCc----c
Confidence 7898 666 99999999999876 97 99999976 899 889999999999999999997 5
Q ss_pred Ccccccc
Q 006839 557 DTCISKT 563 (629)
Q Consensus 557 ~~C~~~~ 563 (629)
..|....
T Consensus 129 ~~c~~~~ 135 (143)
T 4d90_A 129 RNCQYKG 135 (143)
T ss_dssp TTSCBC-
T ss_pred CCceecC
Confidence 5666543
No 10
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.49 E-value=6.8e-14 Score=155.36 Aligned_cols=144 Identities=24% Similarity=0.468 Sum_probs=109.1
Q ss_pred eccccCC-ceee-eccCCCccCCCCccccCCCcccccCCCCCCCCCcCCCcc---ccccCCCceeee-eCCCCCeeEeC-
Q 006839 388 RGKLEKG-AVLK-AICSGFEETTEPAVCLSGETNECLDNNGGCWQDKTANVT---ACKDTFRGRVCE-CPLVDGVQFKG- 460 (629)
Q Consensus 388 ~c~~~~~-~~~c-~cc~Gf~~~~~~~~C~~~d~deC~~~~~~C~~~~~~~~~---~C~n~~g~~~C~-C~~~~G~~~~~- 460 (629)
+|.+..+ +|.| .|.+||. .++..|+ +++||...++.|. +++ .|+|+.++|+|. |++ ||....
T Consensus 16 ~C~n~~~Gsy~C~~C~~Gyt--Gdg~~Ce--DiDEC~~~p~~C~-----~gg~~~~CvNt~gsY~C~~C~~--Gy~G~~c 84 (634)
T 1yo8_A 16 QCSSFPDGSWSCGFCPVGFL--GNGTHCE--DLDECALVPDICF-----STSKVPRCVNTQPGFHCLPCPP--RYRGNQP 84 (634)
T ss_dssp CEEECTTSCEEECCCCTTBC--SCSSSCC--BCCTTTTSCCCSC-----CCSSSCCEEECSSSEEECCCCT--TEEECCC
T ss_pred EEecCCCCCeECCcCCCccC--CCCCCcc--ccccccCCCCccc-----CCccccceeeccCceecccCCC--CcccCcc
Confidence 5777765 4999 9999996 4668999 9999998888898 446 899999999998 999 775332
Q ss_pred ----------CCccccccCCCCcccCCCCCCCCCCCCCCccceeeeCC-----CceeeCCCCcccCCccCCC---CCCCC
Q 006839 461 ----------DGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSE-----NGKCQCPPGFKGDGVKSCV---DIDEC 522 (629)
Q Consensus 461 ----------dg~~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~~~-----~~~C~C~~Gf~g~~~~~C~---dideC 522 (629)
++ +.|+++ ++|...+++|.+. +.|+++. +|.|.|++||.|++.. |+ +||||
T Consensus 85 ~g~g~~~~~~dg-~~C~di--deC~~~~~pC~~~-------~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~-Ce~d~DiDeC 153 (634)
T 1yo8_A 85 VGVGLEAAKTEK-QVCEPE--NPCKDKTHNCHKH-------AECIYLGHFSDPMYKCECQTGYAGDGLI-CGEDSDLDGW 153 (634)
T ss_dssp EESSSHHHHSCC-CCEEEC--CTTTTTCCCCCTT-------EEEEECCTTCSSSEEEEECTTEEESSSS-EEECTTSSSS
T ss_pred ccccccccccCC-Cccccc--ccccCCCcccccC-------ccccccccccccceeeeccCCccccCcc-cccccCcccc
Confidence 33 568887 9998777789776 8898864 8999999999998754 86 89999
Q ss_pred CCC-CCCCCCCCceeeCCCceeEe---cCCC-------CcccCCCCcccc
Q 006839 523 KER-KACQCSECSCKDTWGSYECT---CSGD-------LLYIRDHDTCIS 561 (629)
Q Consensus 523 ~~~-~~C~~~~~~C~nt~Gsy~C~---C~~G-------~~~~~~g~~C~~ 561 (629)
... +.|. .+ ++|.|. |+.+ |...+.+..|..
T Consensus 154 ~~~~~~C~-~~-------~~y~C~~dnC~~~pns~q~D~D~dG~Gd~Cd~ 195 (634)
T 1yo8_A 154 PNLNLVCA-TN-------ATYHCIKDNCPHLPNSGQEDFDKDGIGDACDD 195 (634)
T ss_dssp CSSCCTTT-TT-------CSSSCSCCSSTTSCCTTCCCSSCSSSCTTTCS
T ss_pred cCCCCccc-CC-------CCccccccccccccCcccCCcccccccccccc
Confidence 765 6676 21 355554 5543 344455666754
No 11
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.40 E-value=7.8e-14 Score=133.39 Aligned_cols=109 Identities=20% Similarity=0.460 Sum_probs=90.0
Q ss_pred cccccCCCceeeeeCCCCCeeEeCCCccccccCCCCcccCC--CCCCCCCCCCCCccceeeeCC------CceeeCCCCc
Q 006839 437 TACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKIN--NGGCWHESKDGHTYSACLDSE------NGKCQCPPGF 508 (629)
Q Consensus 437 ~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~~--~~~C~~~~~~~~~~~~C~~~~------~~~C~C~~Gf 508 (629)
+.|+++.++|+|.|++ ||... ++ +.|+++ ++|... ..+|.+. +.|+++. +|.|.|++||
T Consensus 16 g~C~~~~g~~~C~C~~--G~~g~-~~-~~C~~i--d~C~~~~~~~~C~~~-------~~C~~~~~~~~~g~y~C~C~~G~ 82 (186)
T 1z1y_A 16 GQLVQMSNHFXCMCNE--GLVHL-SE-NTCEEX--NECXXETLGXACGEF-------GQCIENPDPAQVNMYXCGCIEGY 82 (186)
T ss_dssp EEEEECSSCEEEEECT--TEEEE-ET-TEEEEC--CCCSGGGTTSEEETT-------EEEEECSSTTSSCSEEEEECTTE
T ss_pred CEeECCCCCeEeECCC--CCccC-CC-CccCCC--CcccCCCCCCCCCCC-------CEeecCCCCcCCCCEECCCCCCC
Confidence 5999999999999999 87654 45 679987 999854 4578765 8898875 7999999999
Q ss_pred ccCCccCCCCCCCCCCCCCCCCCCCcee----eCCCceeEecCCCCcccC-CCCccccc
Q 006839 509 KGDGVKSCVDIDECKERKACQCSECSCK----DTWGSYECTCSGDLLYIR-DHDTCISK 562 (629)
Q Consensus 509 ~g~~~~~C~dideC~~~~~C~~~~~~C~----nt~Gsy~C~C~~G~~~~~-~g~~C~~~ 562 (629)
.|.... |. +|||... +|. ++++|+ |+.|+|+|.|++||++.. ++..|...
T Consensus 83 ~g~~~~-C~-~d~C~~~-~C~-~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~ 137 (186)
T 1z1y_A 83 TLXEDT-CV-LDVCQYX-NCG-ESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXT 137 (186)
T ss_dssp EEETTE-EE-EGGGTTC-CCC-TTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEE
T ss_pred ccCCCC-CC-CCcCcCC-CCC-CCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEc
Confidence 988633 66 8999987 898 889999 899999999999998754 66777653
No 12
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.38 E-value=2e-13 Score=113.30 Aligned_cols=80 Identities=30% Similarity=0.765 Sum_probs=66.5
Q ss_pred CCcccCCCCCCCCCCCCCCccceeeeCC-CceeeCCCCcccCC--ccCCCCCCCCCCC-CCCCCCCCceeeCCCceeEec
Q 006839 471 PGKCKINNGGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDG--VKSCVDIDECKER-KACQCSECSCKDTWGSYECTC 546 (629)
Q Consensus 471 ~~~C~~~~~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~--~~~C~dideC~~~-~~C~~~~~~C~nt~Gsy~C~C 546 (629)
+|+|..+++.|.+ +.|+++. +|.|.|++||.+.. ...|+|||||... ..|. +++|+|+.|+|+|.|
T Consensus 3 ideC~~~~~~C~~--------g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~--~~~C~n~~g~y~C~C 72 (86)
T 1lmj_A 3 IDECRISPDLCGR--------GQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCR--GGVCHNTEGSYRCEC 72 (86)
T ss_dssp CCTTTTCSSTTTT--------SCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTT--TSEEEEETTEEEEES
T ss_pred cccccCCCCCCCC--------CEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCC--CCEeEcCCCCEEEEC
Confidence 4899887667853 5699999 99999999999542 3459999999876 3464 479999999999999
Q ss_pred CCCCcccCCCCccc
Q 006839 547 SGDLLYIRDHDTCI 560 (629)
Q Consensus 547 ~~G~~~~~~g~~C~ 560 (629)
++||.+..++++|.
T Consensus 73 ~~G~~~~~~~~~Ci 86 (86)
T 1lmj_A 73 PPGHQLSPNISACI 86 (86)
T ss_dssp CTTSCCCSSSCCCC
T ss_pred cCCcccCCCCCccC
Confidence 99999998888874
No 13
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.37 E-value=5.5e-13 Score=109.52 Aligned_cols=80 Identities=33% Similarity=0.743 Sum_probs=65.5
Q ss_pred ccccCCCCcccCCCCCCCCCCCCCCccceeeeCC-CceeeCCCCcccCCccCCCCCCCCCCCCCCCCCCCceeeCCCcee
Q 006839 465 HCEVSGPGKCKINNGGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDGVKSCVDIDECKERKACQCSECSCKDTWGSYE 543 (629)
Q Consensus 465 ~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~~~~C~dideC~~~~~C~~~~~~C~nt~Gsy~ 543 (629)
+|+++ ++|.. +.+|.+ +.|+++. +|.|.|++||.+++. .|+|||||...++|. + ++|+|+.|+|+
T Consensus 1 sC~di--deC~~-~~~C~~--------g~C~n~~g~y~C~C~~Gy~~~g~-~C~dideC~~~~~C~-~-~~C~n~~g~y~ 66 (82)
T 1emn_A 1 SAVDM--DECKE-PDVCKH--------GQCINTDGSYRCECPFGYILAGN-ECVDTDECSVGNPCG-N-GTCKNVIGGFE 66 (82)
T ss_dssp CCCCC--CSSSS-TTSCSS--------SEECCCSSCCCEECCTTEEEETT-EEEECCGGGTCCTTS-S-SCEEECSSSEE
T ss_pred CCCcc--ccCCC-CCCcCC--------CEEEecCCCEEEECCCCeECCCC-ccCCcccccCCCCCC-C-CEeECCCCCEE
Confidence 36766 99986 457753 6799999 999999999986553 399999998545897 5 59999999999
Q ss_pred EecCCCCcccCCCCcc
Q 006839 544 CTCSGDLLYIRDHDTC 559 (629)
Q Consensus 544 C~C~~G~~~~~~g~~C 559 (629)
|.|++||.+..+ ..|
T Consensus 67 C~C~~G~~g~~~-~~C 81 (82)
T 1emn_A 67 CTCEEGFEPGPM-MTC 81 (82)
T ss_dssp ECCSSSSCCCSS-SCC
T ss_pred eECCCCeEeCCC-Ccc
Confidence 999999998766 666
No 14
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=99.33 E-value=2.1e-13 Score=117.79 Aligned_cols=82 Identities=32% Similarity=0.729 Sum_probs=34.1
Q ss_pred cccccCCCCcccCCCCCCCCCCCCCCccceeeeCC-CceeeCCCCcccCCccCCCCCCCCCCCCCCCCCCCceeeCCCce
Q 006839 464 SHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDGVKSCVDIDECKERKACQCSECSCKDTWGSY 542 (629)
Q Consensus 464 ~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~~~~C~dideC~~~~~C~~~~~~C~nt~Gsy 542 (629)
..| ++ ++|..++++|.+ .|+++. +|.|.|++||.+.....|+|||||...++|. ++|+|+.|+|
T Consensus 25 ~~C-d~--neC~~~~~~C~~---------~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~~~~C~---~~C~n~~gsy 89 (107)
T 2w2n_E 25 GAM-GT--NECLDNNGGCSY---------VCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS---QLCVNLEGGY 89 (107)
T ss_dssp CCB-SC--CGGGTGGGGCSS---------EEECCSBSCEEECCTTCEEETTTEEEC------------------------
T ss_pred CCC-cC--ccCcCCCCCCCC---------EeEeCCCCeEEECCCCccccCCCccccccccCCCCCcC---CeeecCCCCE
Confidence 447 34 899877677854 499999 9999999999985445599999998545887 8999999999
Q ss_pred eEecCCCCcccCCCCccc
Q 006839 543 ECTCSGDLLYIRDHDTCI 560 (629)
Q Consensus 543 ~C~C~~G~~~~~~g~~C~ 560 (629)
.|.|++||.+..++++|+
T Consensus 90 ~C~C~~Gy~~~~d~~~C~ 107 (107)
T 2w2n_E 90 KCQCEEGFQLDPHTKACK 107 (107)
T ss_dssp ------------------
T ss_pred EEECCCCceECCCCCccC
Confidence 999999999988888874
No 15
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.31 E-value=3e-12 Score=115.67 Aligned_cols=109 Identities=30% Similarity=0.646 Sum_probs=82.2
Q ss_pred eccccCCceeeeccCCCccCCCCccccCCCcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccc
Q 006839 388 RGKLEKGAVLKAICSGFEETTEPAVCLSGETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCE 467 (629)
Q Consensus 388 ~c~~~~~~~~c~cc~Gf~~~~~~~~C~~~d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~ 467 (629)
.|.+..++|.|.|.+||. +..|+. ++++|...+ |. +++.|+++.++|.|.|++ ||. | ..|+
T Consensus 20 ~C~~~~g~~~C~C~~Gy~----G~~C~~-~~~~C~~~~--C~-----~~~~C~~~~g~~~C~C~~--G~~----G-~~C~ 80 (135)
T 2vj3_A 20 KCINTLGSFECQCLQGYT----GPRCEI-DVNECVSNP--CQ-----NDATCLDQIGEFQCICMP--GYE----G-VHCE 80 (135)
T ss_dssp EEEECSSSEEEECCTTEE----STTSCE-ECCTTTTCC--CC-----SSCEEEECSSCEEEECCT--TEE----S-SSSC
T ss_pred EeECCCCCEEEECCCCCc----CCcccc-cCccCCCCC--CC-----CCCEEeCCCCCceeeCCC--CCc----C-Ccce
Confidence 577778899999999994 567854 799997654 87 669999999999999999 664 4 5586
Q ss_pred -cCCCCcccCCCCCCCCCCCCCCccceeeeCC-CceeeCCCCcccCCccCCC-CCCCCCCC-CCCC
Q 006839 468 -VSGPGKCKINNGGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDGVKSCV-DIDECKER-KACQ 529 (629)
Q Consensus 468 -~~~~~~C~~~~~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~~~~C~-dideC~~~-~~C~ 529 (629)
++ ++|... +|.+. +.|++.. +|.|.|++||.|.. |+ +||||... +.|.
T Consensus 81 ~~~--~~C~~~--~C~~~-------g~C~~~~g~~~C~C~~G~~G~~---C~~~i~~C~~~~~~c~ 132 (135)
T 2vj3_A 81 VNT--DECASS--PCLHN-------GRCLDKINEFQCECPTGFTGHL---CQVDLHHILDAQKMVW 132 (135)
T ss_dssp EEC--CTTTTC--CSTTT-------CEEEECSSCEEEECCTTEESSS---SCEECC----------
T ss_pred ecC--CcccCC--CcCCC-------CEeECCCCCeEEECCCCCcCCc---cCccCccccCCCccee
Confidence 45 889743 67665 8899998 99999999999876 96 89999876 4444
No 16
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.31 E-value=2.3e-12 Score=117.65 Aligned_cols=109 Identities=21% Similarity=0.457 Sum_probs=86.1
Q ss_pred eeeeccCCCccC-----CCCccccCCCcccccCCC-CCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCC--------
Q 006839 396 VLKAICSGFEET-----TEPAVCLSGETNECLDNN-GGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGD-------- 461 (629)
Q Consensus 396 ~~c~cc~Gf~~~-----~~~~~C~~~d~deC~~~~-~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~d-------- 461 (629)
+.|.|.+||... .++..|+ ++|||.... .+|. +++.|+++.++|.|.|++ ||.....
T Consensus 19 ~~C~C~~G~~g~~~~~~~~~~~C~--dideC~~~~~~~C~-----~~~~C~n~~g~y~C~C~~--Gy~g~~~~~~~~~~~ 89 (143)
T 2bou_A 19 TACRCNPGFSSFSEIITTPMETCD--DINECATLSKVSCG-----KFSDCWNTEGSYDCVCSP--GYEPVSGAKTFKNES 89 (143)
T ss_dssp SCEEECTTEECSSSSBCSTTCCCE--ECCGGGC----CCC-----TTEEEEECSSCEEEEECT--TEEETTCCSCBSSGG
T ss_pred CEEeCCCCCcCccccccCCCCcCC--ccccccCCCCCCCC-----CCCEEEcCCCCeEeECCC--CcccCcCccccccCC
Confidence 789999999742 2357898 999998753 3697 569999999999999999 8765432
Q ss_pred CccccccCCCCcccCCCCCCCCCCCCCCccceeeeCC-CceeeCCCCcccCC-ccCCCCCCCCC
Q 006839 462 GYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDG-VKSCVDIDECK 523 (629)
Q Consensus 462 g~~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~-~~~C~dideC~ 523 (629)
+ +.|+++ ++|....++|.+. +.|+++. +|.|.|++||.|.. ...|+++++|.
T Consensus 90 ~-~~C~di--deC~~~~~~C~~~-------~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~~~~C~ 143 (143)
T 2bou_A 90 E-NTCQDV--DECSSGQHQCDSS-------TVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTVCE 143 (143)
T ss_dssp G-CCEEEC--CHHHHTCCCCCTT-------SEEEECSSCEEEECCSSSCBCTTCCSSBTTCCBC
T ss_pred C-CCcCCc--cCccCcCCCCCCC-------CEEECCCCCEEeeCCCCcccCCCCccCccCCccC
Confidence 3 479887 9998766788766 8899999 99999999999875 35588887774
No 17
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.19 E-value=6.6e-12 Score=104.27 Aligned_cols=80 Identities=30% Similarity=0.732 Sum_probs=66.9
Q ss_pred CCcccCCCCCCCCCCCCCCccceeeeCC-CceeeCCCCcccCC-ccCCCCCCCCCCCCCCCCCCCceeeCCCceeEec--
Q 006839 471 PGKCKINNGGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDG-VKSCVDIDECKERKACQCSECSCKDTWGSYECTC-- 546 (629)
Q Consensus 471 ~~~C~~~~~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~-~~~C~dideC~~~~~C~~~~~~C~nt~Gsy~C~C-- 546 (629)
+++|..++..| .. +.|+++. +|.|.|++||+++. ...|+|||||..+ +|. ++|+|+.|+|+|.|
T Consensus 3 ideC~~~~~~C-~~-------~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~-~C~---~~C~n~~g~y~C~C~g 70 (87)
T 1z6c_A 3 VDECSLKPSIC-GT-------AVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSEN-MCA---QLCVNYPGGYTCYCDG 70 (87)
T ss_dssp SCSSSSSSSSB-TT-------SSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHS-CCS---SEECCCSSSCCEECCS
T ss_pred cccccCCCCCC-CC-------CEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCC-CCC---CEEEccCCCEEEECCC
Confidence 48998776667 44 6799999 99999999999653 2459999999876 898 89999999999999
Q ss_pred CCCCcccCCCCccccc
Q 006839 547 SGDLLYIRDHDTCISK 562 (629)
Q Consensus 547 ~~G~~~~~~g~~C~~~ 562 (629)
..||.+..++..|.+.
T Consensus 71 ~~G~~~~~~~~~C~di 86 (87)
T 1z6c_A 71 KKGFKLAQDQKSCEVV 86 (87)
T ss_dssp SSCCBCCTTSSSCBCC
T ss_pred CcCCcccCCCCcceEC
Confidence 5888888888888753
No 18
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.18 E-value=1.2e-10 Score=126.33 Aligned_cols=205 Identities=13% Similarity=0.098 Sum_probs=127.0
Q ss_pred cEEEEccCCccccccccccCcCCCCCCCCceeeEeccCCCcCCCCCCCCCCCccccCCCCCCcEEEEeCCCcC-------
Q 006839 35 SLMVTSPEKIKGSHDSAIGNFGIPQYGGSMAGAVTYPKENRKGCREFGDFGISFKAKPGALPNFVLVDRGDCF------- 107 (629)
Q Consensus 35 ~~~v~~p~~~~~~~~~~~a~Fg~~~~~~~~~g~l~~~~~~~~gC~~~~~~~~~~~~~~~~~~~i~Lv~RG~C~------- 107 (629)
++++..|.. ..+......+++..+.+.++|.||+.. +...|+.... .+++ ||||||+||.|.
T Consensus 79 ~~~~~~~~~--~~~~~~~l~~s~~tp~~~vta~lV~v~-~~~~~~~~~~--~dvk------GKIVlv~~~~~~~~~~~~y 147 (444)
T 3iib_A 79 KASILSPFP--QPLVVTALGGSIATPAQGLSATIVRFD-TLQDLQNAEA--GSLN------DKIAFIDAKTERHRDGKGY 147 (444)
T ss_dssp EEEEEESSC--EEECEEECBTCCCCCTTCEEEEEEEES-SHHHHHTSCT--TTTT------TCEEEECCCCCCCTTCHHH
T ss_pred EEEEeCCCC--ceEEEEeccCCCCCCCCCeEEEEEecC-CHHHHhhccc--cccC------ccEEEEeCCCCCCcccccc
Confidence 455555532 234444445555555678999998843 3344443321 2454 999999999995
Q ss_pred --HHHHH----HHHHHcCCcEEEEEECCCCCc---e--ecCCCCCccccccccCcccccEEEEeHHHHHHHHHHHcCCCe
Q 006839 108 --FALKV----WNAQKAGASAVLVADDIEEAL---I--TMDTPEEDISSAKYIENITIPSALIDKSFGETLKKALSGGEM 176 (629)
Q Consensus 108 --F~~K~----~nAq~aGA~avII~n~~~~~~---~--~m~~~~~~~~~~~~~~~i~IP~~~I~~~~G~~l~~~l~~~~~ 176 (629)
|..|. .+|+++||+||||+|+..... . .|..+ .....||++.|+..+|+.|++++++|..
T Consensus 148 ~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~---------~~~~~IP~~~Is~~da~~L~~~l~~g~~ 218 (444)
T 3iib_A 148 GQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYE---------EGVTAIPAAAISNPDADLINAMLKRDKE 218 (444)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCC---------TTSCCCCEEEECHHHHHHHHHHHTTTCC
T ss_pred cchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccC---------CCCCCCCeEEecHHHHHHHHHHHhCCCC
Confidence 77774 579999999999999764321 1 11111 1246899999999999999999998877
Q ss_pred EEEEEEecccccCCCCceeEEEEeccCCccchhhhhHHHHHHHhhHHHHHHhcCCceeEEEEEEEeccCcccccchhhhh
Q 006839 177 VNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMAFVKEFRGPAQILEKGGYTQFTPHYITWYCPMTFTLSRQCKS 256 (629)
Q Consensus 177 v~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~f~p~~~~~~c~~~~~~~~~~~~ 256 (629)
+.++++...... .....+|+++.....- ..+..+.+..||-+|.-
T Consensus 219 ~~v~l~~~~~~~--~~~~~~Nvi~~~~g~~---------------------~~~~~i~~~aH~Ds~~~------------ 263 (444)
T 3iib_A 219 VVISLELGSERR--GETTSYNVIAEVKGST---------------------KADEIVLIGAHLDSWDE------------ 263 (444)
T ss_dssp CEEEEEEEEEEE--EEEEEEEEEEEECCST---------------------EEEEEEEEEEECCCCSS------------
T ss_pred eEEEEEEeeeEc--CCceeEEEEEEEeCCC---------------------CCCCEEEEEeecccCCC------------
Confidence 777776632111 1345678877654210 01235777777776631
Q ss_pred hcccCCccCCCCCCCCCCCCCCcchhHHHHHHhhhhhhhcccCCCCcchhh
Q 006839 257 QCINHGRYCAPDPEQDFSSGYEGKDVVLENLRQLCVFKVAKESKKPWVWWD 307 (629)
Q Consensus 257 ~ci~~Gryc~~dp~~~~~~~~~g~dvv~e~lrq~c~~~~~~~~~~~~~ww~ 307 (629)
|++ + .| +-+|.-+++|.+|.|--........+.+.||.
T Consensus 264 -----g~G-a----~D---~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~ 301 (444)
T 3iib_A 264 -----GTG-A----ID---DGAGVAIVTAAAKHILDLPQKPERTIRVVLYA 301 (444)
T ss_dssp -----SCC-T----TT---THHHHHHHHHHHHHHHTSSSCCSEEEEEEEES
T ss_pred -----CCC-C----cc---chHHHHHHHHHHHHHHhcCCCCCCeEEEEEEC
Confidence 100 1 12 34688899999998764321112235566776
No 19
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.16 E-value=1.9e-11 Score=111.72 Aligned_cols=84 Identities=20% Similarity=0.517 Sum_probs=67.7
Q ss_pred cccccCCCCcccCCCCCCCCCCCCCCccceeeeCC-CceeeCCCCcccCCccCCCCCCCCCCC-CCCCCCCCce-eeCCC
Q 006839 464 SHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDGVKSCVDIDECKER-KACQCSECSC-KDTWG 540 (629)
Q Consensus 464 ~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~~~~C~dideC~~~-~~C~~~~~~C-~nt~G 540 (629)
..|.++ |+|.. .+|.+. +.|+++. +|.|.|++||.|.. |+++|+|... ++|. ++| +|+.|
T Consensus 43 ~~c~di--deC~~--~pC~n~-------g~C~~~~~~y~C~C~~G~~G~~---C~~~deC~~~~~~C~---~~C~~n~~g 105 (146)
T 1x7a_L 43 KQYVDG--DQCEP--NPCLNG-------GLCKDDINSYECWCQVGFEGKN---CELDATCNIKNGRCK---QFCKTGADS 105 (146)
T ss_dssp ---------CCSS--CSSCTT-------CEEEECSSCEEEECCSSEESTT---TCEECCTTSGGGSCS---SBCCCCSSS
T ss_pred ccCCCc--CcCCC--CCCCCC-------CEeECCCCCEEEecCCCCcCCc---CCCCccccCCCCCCc---CCCCCCCCC
Confidence 458877 99974 478776 8899999 99999999999865 9999999976 5787 499 99999
Q ss_pred ceeEecCCCCcccCCCCccccccc
Q 006839 541 SYECTCSGDLLYIRDHDTCISKTA 564 (629)
Q Consensus 541 sy~C~C~~G~~~~~~g~~C~~~~~ 564 (629)
+|.|.|++||.+..+|..|.....
T Consensus 106 ~y~C~C~~Gy~l~~dG~~C~~~~~ 129 (146)
T 1x7a_L 106 KVLCSCTTGYRLAPDQKSCKPAVP 129 (146)
T ss_dssp CCCCBCCTTEEECTTSSSEEECSS
T ss_pred CEEeEcCCCcEeCCCCCcCCCCCC
Confidence 999999999999999999987653
No 20
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.12 E-value=1.3e-10 Score=133.30 Aligned_cols=126 Identities=27% Similarity=0.609 Sum_probs=92.0
Q ss_pred CCccccCCCccccc-CCCCCCCCCcCCCccccccCCC--ceeeeeCCCCCeeEeCCCccccccCCCCcccCCCCCCCCCC
Q 006839 409 EPAVCLSGETNECL-DNNGGCWQDKTANVTACKDTFR--GRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHES 485 (629)
Q Consensus 409 ~~~~C~~~d~deC~-~~~~~C~~~~~~~~~~C~n~~g--~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~~~~~C~~~~ 485 (629)
++..|. .+++|. ...-.|. + +.|++... .+.+.|+. |. .+.. ..|. + ++|..+++.|.+.
T Consensus 245 de~~C~--~~~~C~~~~~~~C~-----~-g~Ci~~~~~Cd~~~dC~d--gs--De~~-~~C~-~--~eC~~~~~~C~~~- 307 (699)
T 1n7d_A 245 DEVGCV--NVTLCEGPNKFKCH-----S-GECITLDKVCNMARDCRD--WS--DEPI-KECG-T--NECLDNNGGCSHV- 307 (699)
T ss_dssp SSSSTT--CCCCCCSTTCCCCT-----T-SCCCCSSCCSCSSCCSSS--SC--SCCC-SSCC-C--CCTTSSTTTSCTT-
T ss_pred ccCCCC--CCCcccCCCceecC-----C-CcEeCCcccccccceecC--cc--cccc-cccc-c--ccccccccCcCCC-
Confidence 444565 555663 2223464 2 67766422 34567777 32 2222 3463 3 8998877788755
Q ss_pred CCCCccceeeeCC-CceeeCCCCcccCCccCCCCCCCCCCCCCCCCCCCceeeCCCceeEecCCCCcccCCCCccccc
Q 006839 486 KDGHTYSACLDSE-NGKCQCPPGFKGDGVKSCVDIDECKERKACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCISK 562 (629)
Q Consensus 486 ~~~~~~~~C~~~~-~~~C~C~~Gf~g~~~~~C~dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~~~ 562 (629)
|.+++ +|.|.|++||.+...+.|+|||||...++|+ +.|+|+.|+|+|.|++||.+..++++|...
T Consensus 308 --------C~~~~~~~~C~C~~G~~~~~~~~C~dideC~~~~~C~---~~C~n~~g~y~C~C~~G~~~~~~~~~C~~~ 374 (699)
T 1n7d_A 308 --------CNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS---QLCVNLEGGYKCQCEEGFQLDPHTKACKAV 374 (699)
T ss_dssp --------CCCCTTCCCCCCCSSSCCCSSSCCCCCCCCSSSSSCT---TTCCBCSSCBCCCCCSSCBCCSSCCCCBCC
T ss_pred --------cccCCCCcEEeCCCCeEcCCCCcccCccccCCCCccc---cccccCCCCeeeeeecccccCCCCCccccc
Confidence 99999 9999999999975445699999998656898 799999999999999999999999999865
No 21
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.12 E-value=8.1e-11 Score=96.45 Aligned_cols=80 Identities=25% Similarity=0.684 Sum_probs=63.6
Q ss_pred cccCCCcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCCCcccCCCCCCCCCCCCCCcc
Q 006839 412 VCLSGETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTY 491 (629)
Q Consensus 412 ~C~~~d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~~~~~C~~~~~~~~~~ 491 (629)
+|. |+|||.. +.+|. + +.|+|+.++|+|.|++ ||.+ +| +.|+++ ++|.. ..+|.+
T Consensus 1 sC~--dideC~~-~~~C~-----~-g~C~n~~g~y~C~C~~--Gy~~--~g-~~C~di--deC~~-~~~C~~-------- 55 (82)
T 1emn_A 1 SAV--DMDECKE-PDVCK-----H-GQCINTDGSYRCECPF--GYIL--AG-NECVDT--DECSV-GNPCGN-------- 55 (82)
T ss_dssp CCC--CCCSSSS-TTSCS-----S-SEECCCSSCCCEECCT--TEEE--ET-TEEEEC--CGGGT-CCTTSS--------
T ss_pred CCC--ccccCCC-CCCcC-----C-CEEEecCCCEEEECCC--CeEC--CC-CccCCc--ccccC-CCCCCC--------
Confidence 367 8999986 45686 3 7999999999999999 7765 45 679987 99974 346753
Q ss_pred ceeeeCC-CceeeCCCCcccCCccCC
Q 006839 492 SACLDSE-NGKCQCPPGFKGDGVKSC 516 (629)
Q Consensus 492 ~~C~~~~-~~~C~C~~Gf~g~~~~~C 516 (629)
+.|+++. +|.|.|++||.|++.+.|
T Consensus 56 ~~C~n~~g~y~C~C~~G~~g~~~~~C 81 (82)
T 1emn_A 56 GTCKNVIGGFECTCEEGFEPGPMMTC 81 (82)
T ss_dssp SCEEECSSSEEECCSSSSCCCSSSCC
T ss_pred CEeECCCCCEEeECCCCeEeCCCCcc
Confidence 5699999 999999999998764334
No 22
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.11 E-value=4.8e-11 Score=98.81 Aligned_cols=77 Identities=23% Similarity=0.491 Sum_probs=64.3
Q ss_pred CcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEe-CCCccccccCCCCcccCCCCCCCCCCCCCCccceee
Q 006839 417 ETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFK-GDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACL 495 (629)
Q Consensus 417 d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~-~dg~~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~ 495 (629)
|+|||...++.|. + +.|+|++++|+|.|++ ||... .++ +.|+++ ++|...+..|. . +.|+
T Consensus 2 dideC~~~~~~C~-----~-g~C~n~~g~y~C~C~~--Gy~~~~~~g-~~C~di--deC~~~~~~C~-~-------~~C~ 62 (86)
T 1lmj_A 2 DIDECRISPDLCG-----R-GQCVNTPGDFECKCDE--GYESGFMMM-KNCMDI--DECQRDPLLCR-G-------GVCH 62 (86)
T ss_dssp CCCTTTTCSSTTT-----T-SCEEEETTEEEECCCS--SEEECTTTS-SSEEEC--CHHHHCSSTTT-T-------SEEE
T ss_pred ccccccCCCCCCC-----C-CEEECCCCCEEeeCCC--CcCccCCCC-CccCCc--ccccCCCCcCC-C-------CEeE
Confidence 7999998888896 3 5999999999999999 87754 246 779987 99987766674 2 6799
Q ss_pred eCC-CceeeCCCCcccCC
Q 006839 496 DSE-NGKCQCPPGFKGDG 512 (629)
Q Consensus 496 ~~~-~~~C~C~~Gf~g~~ 512 (629)
|+. +|.|.|++||.+..
T Consensus 63 n~~g~y~C~C~~G~~~~~ 80 (86)
T 1lmj_A 63 NTEGSYRCECPPGHQLSP 80 (86)
T ss_dssp EETTEEEEESCTTSCCCS
T ss_pred cCCCCEEEECcCCcccCC
Confidence 999 99999999999864
No 23
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.08 E-value=1e-10 Score=102.32 Aligned_cols=88 Identities=19% Similarity=0.408 Sum_probs=66.0
Q ss_pred cccCCCCcccCCC--CCCCCCCCCCCccceeeeCC-CceeeCCCCcccCCccCCCCC---CCCCCC-CCCCCCCCceeeC
Q 006839 466 CEVSGPGKCKINN--GGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDGVKSCVDI---DECKER-KACQCSECSCKDT 538 (629)
Q Consensus 466 C~~~~~~~C~~~~--~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~~~~C~di---deC~~~-~~C~~~~~~C~nt 538 (629)
+.++ ++|..++ +.|.+.|.+ +++|+++. +|.|.|++||.|.. |+++ +||... +.|. ++|+|+
T Consensus 3 ~~d~--d~C~~~p~~~~C~~~C~~---~g~C~~~~~~y~C~C~~G~~G~~---C~~~~~~~~C~~~~~~C~---~~C~n~ 71 (114)
T 1aut_L 3 HVDG--DQCLVLPLEHPCASLCCG---HGTCIDGIGSFSCDCRSGWEGRF---CQREVSFLNCSLDNGGCT---HYCLEE 71 (114)
T ss_dssp -------CCCCCSSCCSSSSTTTT---SEEECCCSSCCCEEECTTEESTT---SCEECCSSSSSSGGGGCS---SEEEEC
T ss_pred ceec--ccccCCCccccccccCCC---cCCCCCCCCCcEeeCCCCCcCCC---cCcCCcCCcCcCCCCCCC---CEeECC
Confidence 4444 7887664 334333322 27899999 99999999999886 8764 579865 5677 599999
Q ss_pred CCceeEecCCCCcccCCCCccccccc
Q 006839 539 WGSYECTCSGDLLYIRDHDTCISKTA 564 (629)
Q Consensus 539 ~Gsy~C~C~~G~~~~~~g~~C~~~~~ 564 (629)
.|+|+|.|++||.+..++.+|.....
T Consensus 72 ~g~y~C~C~~G~~~~~~g~~C~~~~~ 97 (114)
T 1aut_L 72 VGWRRCSCAPGYKLGDDLLQCHPAVK 97 (114)
T ss_dssp SSSEEEECCTTEEECTTSSCEEECSS
T ss_pred CCCEEeECCCCeeECCCCCccCcCcc
Confidence 99999999999999999999987654
No 24
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.06 E-value=7.1e-11 Score=126.57 Aligned_cols=80 Identities=34% Similarity=0.787 Sum_probs=67.9
Q ss_pred CcccCCCCCCCCCCCCCCccceeeeCC-CceeeCCCCcccCCccCCCCCCCCCCCCCCCCCCCceeeCCCceeEecCCCC
Q 006839 472 GKCKINNGGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDGVKSCVDIDECKERKACQCSECSCKDTWGSYECTCSGDL 550 (629)
Q Consensus 472 ~~C~~~~~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~~~~C~dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~ 550 (629)
|||..+++.|.+ .|.+++ +|.|.|++||.+.....|+|||||...++|. +.|+|+.|+|.|.|.+||
T Consensus 1 ~eC~~~~~~c~~---------~C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~~~~C~---~~C~n~~g~~~C~C~~g~ 68 (400)
T 3p5b_L 1 NECLDNNGGCSH---------VCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS---QLCVNLEGGYKCQCEEGF 68 (400)
T ss_dssp CCTTTTGGGCSS---------EEEECSSSEEEECCTTEEECSSSCEEECCCCSTTSSCS---SCCBCCSSSCBCCCCTTC
T ss_pred CcccCCCCCCCC---------EeECCCCCeEEECCCCCCcCCCCcccCchhhhccCCCC---CccCCCccceeeeccccc
Confidence 478766666754 499999 9999999999964445699999998656898 699999999999999999
Q ss_pred cccCCCCcccccc
Q 006839 551 LYIRDHDTCISKT 563 (629)
Q Consensus 551 ~~~~~g~~C~~~~ 563 (629)
.+..++.+|....
T Consensus 69 ~~~~~~~~C~~~~ 81 (400)
T 3p5b_L 69 QLDPHTKACKAVG 81 (400)
T ss_dssp CCCTTTSSCCCST
T ss_pred cccccccceeecc
Confidence 9999999998754
No 25
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.04 E-value=5.1e-11 Score=111.09 Aligned_cols=108 Identities=21% Similarity=0.374 Sum_probs=77.2
Q ss_pred eeccccCCceeeeccCCCccCCCCccccCCCccc--ccCCCCCCCCCcCCCccccccCCC----ceeeeeCCCCCee---
Q 006839 387 YRGKLEKGAVLKAICSGFEETTEPAVCLSGETNE--CLDNNGGCWQDKTANVTACKDTFR----GRVCECPLVDGVQ--- 457 (629)
Q Consensus 387 ~~c~~~~~~~~c~cc~Gf~~~~~~~~C~~~d~de--C~~~~~~C~~~~~~~~~~C~n~~g----~~~C~C~~~~G~~--- 457 (629)
..|.++.++|.|.|.+||....++..|+ ++++ |...+.+|.. .+++.|+++.+ +|.|.|++ ||.
T Consensus 15 ~~C~n~~gsy~C~C~~Gy~~~~~g~~C~--d~~~~~C~~~~~~c~~---~~~~~C~~~~~~~~~~~~C~C~~--G~~~~~ 87 (162)
T 1uzk_A 15 GNCVNTPGSYICDCPPDFELNPTRVGCV--DTRSGNCYLDIRPRGD---NGDTACSNEIGVGVSKASCCCSL--GKAWGT 87 (162)
T ss_dssp SEEEEETTEEEEECCTTCEECTTSSBEE--CCCCEEEEEEC-------------CEEEEEEEECHHHHHTTT--CCEETT
T ss_pred CEeECCCCCEEEeCCCCCeECCCCCccc--CCCCCcccCCCcccCC---CCCCcccCCcCCcccCceeeCCC--CCCcCC
Confidence 4688899999999999998777799999 8887 9765544521 03478888766 67777776 443
Q ss_pred ----------------------EeC--CCccccccCCCCcccCCCCCCCCCCCCCCccceeeeCC-CceeeCCCCcccCC
Q 006839 458 ----------------------FKG--DGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDG 512 (629)
Q Consensus 458 ----------------------~~~--dg~~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~ 512 (629)
|.+ ++ +.|+++ |||...+++|.+ +.|+|+. +|.|.|++||.++.
T Consensus 88 ~C~~C~~~~~~~y~C~C~~g~G~~~~~~~-~~c~di--deC~~~~~~C~~--------g~C~n~~gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 88 PCEMCPAVNTSEYKILCPGGEGFRPNPIT-VILEDI--DECQELPGLCQG--------GKCINTFGSFQCRCPTGYYLNE 156 (162)
T ss_dssp TTEECCCTTSHHHHHHCTTCTTEEECTTT-CCEEEC--CHHHHCGGGGBT--------SEEEECSSCEEEECCTTCCBCT
T ss_pred CcccCCCCCCCCceeECCCCCCcccCCCC-CccCcc--ccccCCCCCcCC--------CEeEcCCCCEEeeCCCCccCCC
Confidence 332 34 467877 999876667853 5799999 99999999999864
No 26
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.03 E-value=1.4e-10 Score=134.14 Aligned_cols=127 Identities=27% Similarity=0.599 Sum_probs=87.6
Q ss_pred CCccccCCCcccccC-CCCCCCCCcCCCccccccCCC--ceeeeeCCCCCeeEeCCCccccccCCCCcccCCCCCCCCCC
Q 006839 409 EPAVCLSGETNECLD-NNGGCWQDKTANVTACKDTFR--GRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHES 485 (629)
Q Consensus 409 ~~~~C~~~d~deC~~-~~~~C~~~~~~~~~~C~n~~g--~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~~~~~C~~~~ 485 (629)
++..|. .+++|.. ....|. + +.|++... ...+.|+. | ..++. ..|. + ++|..+++.|.+.
T Consensus 263 DE~~C~--~~~~C~~~~~~~C~-----~-G~Ci~~~~~Cd~~~dC~d--g--sDe~~-~~C~-~--~~C~~~~~~C~~~- 325 (791)
T 3m0c_C 263 DEVGCV--NVTLCEGPNKFKCH-----S-GECITLDKVCNMARDCRD--W--SDEPI-KECG-T--NECLDNNGGCSHV- 325 (791)
T ss_dssp ------------CCSTTCCCCT-----T-SCCCCSSCCSCSSCCSSS--S--CSCCC-TTBS-C--CSTTTGGGGCSSE-
T ss_pred ccCccc--ccccccCCCccccC-----C-CcccccccccCCcccccc--c--cCccc-cccc-c--ccccccccCcccc-
Confidence 455676 5666742 223475 2 67876533 34567877 4 33333 4574 3 7888776777654
Q ss_pred CCCCccceeeeCC-CceeeCCCCcccCCccCCCCCCCCCCCCCCCCCCCceeeCCCceeEecCCCCcccCCCCcccccc
Q 006839 486 KDGHTYSACLDSE-NGKCQCPPGFKGDGVKSCVDIDECKERKACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCISKT 563 (629)
Q Consensus 486 ~~~~~~~~C~~~~-~~~C~C~~Gf~g~~~~~C~dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~~~~ 563 (629)
|.+++ +|.|.|++||.+...+.|+|||||.....|. +.|+|+.|+|+|.|++||.+..++++|+...
T Consensus 326 --------C~~~~~~y~C~C~~Gy~l~~g~~C~dideC~~~~~C~---~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~~ 393 (791)
T 3m0c_C 326 --------CNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS---QLCVNLEGGYKCQCEEGFQLDPHTKACKAVG 393 (791)
T ss_dssp --------EEECSBSEEEECCTTCEEETTTEEECCCCCSSSSSCT---TTCCBCSSCBCCCCCSSEECCSSCCCCEETT
T ss_pred --------ccCCCCCcccCCCCCCccCCCCccccCcccCCCCCCC---CeeecCCCCceeecCCCCEeCCCCceeeecc
Confidence 99999 9999999999864334599999998556787 7999999999999999999999999998754
No 27
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.02 E-value=6e-11 Score=113.04 Aligned_cols=83 Identities=22% Similarity=0.576 Sum_probs=36.7
Q ss_pred cccccCCCCcccCCCCCCCCCCCCCCccceeeeCC-CceeeCCCCcccCCccCCCC-C-CCCCCC-CCCCCCCCceeeCC
Q 006839 464 SHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDGVKSCVD-I-DECKER-KACQCSECSCKDTW 539 (629)
Q Consensus 464 ~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~~~~C~d-i-deC~~~-~~C~~~~~~C~nt~ 539 (629)
..|.++ ++|..+ +|.+. +.|++.. +|.|.|++||.|.. |++ | |+|... ++|. ++|+|+.
T Consensus 37 ~~c~di--deC~~~--pC~ng-------g~C~n~~g~y~C~C~~Gf~G~~---Ce~~i~deC~~~~~~C~---~~C~n~~ 99 (195)
T 1nfu_B 37 NKYKDG--DQCETS--PCQNQ-------GKCKDGLGEYTCTCLEGFEGKN---CELFTRKLCSLDNGDCD---QFCHEEQ 99 (195)
T ss_dssp ----------------------------------------------------------CCGGGTGGGGCS---SEEEEET
T ss_pred ccCCCC--cccCCC--CCCCC-------CEeECCCCCeeEeCCCCceecc---ccccccccccCCCCCCC---CEeECCC
Confidence 458877 999853 68776 7899999 99999999999865 986 6 999875 5787 5999999
Q ss_pred CceeEecCCCCcccCCCCcccccc
Q 006839 540 GSYECTCSGDLLYIRDHDTCISKT 563 (629)
Q Consensus 540 Gsy~C~C~~G~~~~~~g~~C~~~~ 563 (629)
|+|.|.|++||.+..+|..|....
T Consensus 100 gsy~C~C~~Gy~l~~dG~~C~~~~ 123 (195)
T 1nfu_B 100 NSVVCSCARGYTLADNGKACIPTG 123 (195)
T ss_dssp TEEEEECCTTEEECTTSSCEEESS
T ss_pred CCeEEECCCCceeCCCCCccccCC
Confidence 999999999999999999998765
No 28
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.01 E-value=2.9e-10 Score=94.29 Aligned_cols=82 Identities=28% Similarity=0.592 Sum_probs=63.9
Q ss_pred CcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCCCcccCCCCCCCCCCCCCCccceeee
Q 006839 417 ETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLD 496 (629)
Q Consensus 417 d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~ 496 (629)
|+|||..++..|. ++.|+|+.++|+|.|++ ||.+..++ +.|+++ ++|.. ++|.. .|++
T Consensus 2 dideC~~~~~~C~------~~~C~n~~g~y~C~C~~--G~~~~~~g-~~C~di--deC~~--~~C~~---------~C~n 59 (87)
T 1z6c_A 2 DVDECSLKPSICG------TAVCKNIPGDFECECPE--GYRYNLKS-KSCEDI--DECSE--NMCAQ---------LCVN 59 (87)
T ss_dssp CSCSSSSSSSSBT------TSSCCCBTTBCCCSSST--TCEEETTT-TEEECC--CHHHH--SCCSS---------EECC
T ss_pred ccccccCCCCCCC------CCEeECCCCCEEEECCC--CceECCCC-CcCCCc--CeeCC--CCCCC---------EEEc
Confidence 7899998877782 38999999999999999 99988888 899977 99974 36753 5999
Q ss_pred CC-CceeeCC--CCcccCC-ccCCCCCC
Q 006839 497 SE-NGKCQCP--PGFKGDG-VKSCVDID 520 (629)
Q Consensus 497 ~~-~~~C~C~--~Gf~g~~-~~~C~did 520 (629)
++ +|.|.|+ +||.... ...|+||+
T Consensus 60 ~~g~y~C~C~g~~G~~~~~~~~~C~di~ 87 (87)
T 1z6c_A 60 YPGGYTCYCDGKKGFKLAQDQKSCEVVS 87 (87)
T ss_dssp CSSSCCEECCSSSCCBCCTTSSSCBCCC
T ss_pred cCCCEEEECCCCcCCcccCCCCcceECc
Confidence 99 9999995 5555322 23355553
No 29
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.00 E-value=2.2e-10 Score=95.73 Aligned_cols=82 Identities=17% Similarity=0.426 Sum_probs=65.3
Q ss_pred ceeeeeCCCCCeeEeCCCccccccCCCCcccCCCCCCCCCCCCCCccceeeeCC-CceeeCCCCcccCCccCCC--CCCC
Q 006839 445 GRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDGVKSCV--DIDE 521 (629)
Q Consensus 445 ~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~~~~C~--dide 521 (629)
+|+|.|.+ ||. | ..|+ + ++|... .|.+.. +|.|.|++||. .|+ ++|+
T Consensus 1 sy~C~C~~--g~~----g-~~c~-~--~~c~~~---------------pC~n~~~~y~C~C~~G~~-----~C~~~~~~~ 50 (91)
T 1tpg_A 1 SYQVICRD--EKT----Q-MIYQ-Q--HQSWLR---------------PVLRSNRVEYCWCNSGRA-----QCHSVPVKS 50 (91)
T ss_dssp CCCCCCBC--SSS----C-CBCC-S--SCEEEE---------------ECSSSSCEEEEECSSSCC-----BCCEECEEE
T ss_pred CeeeECCC--CCc----C-CeEC-C--CcccCC---------------ccccCCCCcEeECCCCCc-----ccccCcCCc
Confidence 58999999 664 3 4463 4 777543 255666 89999999997 386 8999
Q ss_pred CCCCCCCCCCCCceeeCC--CceeEecCCCCcccCCCCccccc
Q 006839 522 CKERKACQCSECSCKDTW--GSYECTCSGDLLYIRDHDTCISK 562 (629)
Q Consensus 522 C~~~~~C~~~~~~C~nt~--Gsy~C~C~~G~~~~~~g~~C~~~ 562 (629)
|..+ +|. ++++|+++. ++|.|.|++||. |..|...
T Consensus 51 C~~~-pC~-ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~~ 87 (91)
T 1tpg_A 51 CSEP-RCF-NGGTCQQALYFSDFVCQCPEGFA----GKSCEID 87 (91)
T ss_dssp CSSC-CSC-TTCEEEEESSSSCEEEECCTTCB----SSSCCBC
T ss_pred ccCC-CCC-CCCEeecCCCCCCeEeECCCCCc----CCcCCcC
Confidence 9987 999 899999988 999999999996 6778643
No 30
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.99 E-value=1e-10 Score=105.29 Aligned_cols=84 Identities=21% Similarity=0.570 Sum_probs=36.7
Q ss_pred cccccCCCCcccCCCCCCCCCCCCCCccceeeeCC-CceeeCCCCcccCCccCCCC-C-CCCCCC-CCCCCCCCceeeCC
Q 006839 464 SHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDGVKSCVD-I-DECKER-KACQCSECSCKDTW 539 (629)
Q Consensus 464 ~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~~~~C~d-i-deC~~~-~~C~~~~~~C~nt~ 539 (629)
..|.++ ++|..+ +|.+. +.|+++. +|.|.|++||.|.. |++ | |+|... ++|. ++|+|+.
T Consensus 37 ~~c~d~--d~C~~~--pC~n~-------g~C~~~~~~y~C~C~~G~~G~~---C~~~i~d~C~~~~~~C~---~~C~~~~ 99 (134)
T 2vh0_B 37 NKYKDG--DQCETS--PCQNQ-------GKCKDGLGEYTCTCLEGFEGKN---CELFTRKLCSLDNGDCD---QFCHEEQ 99 (134)
T ss_dssp ----------------------------------------------------------CCGGGTGGGGCS---SEEEEET
T ss_pred ccCCCc--CcCCCC--CCCCc-------CCcccCCCCEEeeCCCCccCCc---cccCCCCccccCCCCCC---CEeECCC
Confidence 358777 899854 68765 7899998 99999999999865 987 7 999875 5787 4999999
Q ss_pred CceeEecCCCCcccCCCCccccccc
Q 006839 540 GSYECTCSGDLLYIRDHDTCISKTA 564 (629)
Q Consensus 540 Gsy~C~C~~G~~~~~~g~~C~~~~~ 564 (629)
|+|.|.|++||.+..+|..|.....
T Consensus 100 g~y~C~C~~Gy~l~~~g~~C~~~~~ 124 (134)
T 2vh0_B 100 NSVVCSCARGYTLADNGKACIPTGP 124 (134)
T ss_dssp TEEEEECCTTEEECTTSSCEEESSS
T ss_pred CCEEEECCCCcEECCCCCccCcCCC
Confidence 9999999999999999999987643
No 31
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.98 E-value=3.4e-09 Score=114.18 Aligned_cols=166 Identities=20% Similarity=0.199 Sum_probs=106.7
Q ss_pred CCCceeeEeccCCCcCCCCCCCCCCCccccCCCCCCcEEEEeCCCcCHHHHHHHHHHcCCcEEEEEECCCCCceecCCCC
Q 006839 61 GGSMAGAVTYPKENRKGCREFGDFGISFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPE 140 (629)
Q Consensus 61 ~~~~~g~l~~~~~~~~gC~~~~~~~~~~~~~~~~~~~i~Lv~RG~C~F~~K~~nAq~aGA~avII~n~~~~~~~~m~~~~ 140 (629)
.+.++|.|++.. .| .+.++.+.+++ ||||||+||+|+|.+|+.+|+++||+|||||++.+..+..+. .
T Consensus 90 ~g~v~a~lv~~~---~G-~~~D~~~~dv~------GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~--~ 157 (421)
T 2ek8_A 90 NSDVTAELVYVG---LG-TTADVAGKDLN------GKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTL--G 157 (421)
T ss_dssp CEEEEEEEEECT---TC-CTTTTTTSCCT------TSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBC--S
T ss_pred CCCcceEEEECC---CC-ChhhcCCCCcC------ceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCccccccc--C
Confidence 456899998732 23 22222222444 999999999999999999999999999999998744332111 0
Q ss_pred CccccccccCcccccEEEEeHHHHHHHHHHH---cCCCeEEEEEEecccccCCCCceeEEEEeccCCccchhhhhHHHHH
Q 006839 141 EDISSAKYIENITIPSALIDKSFGETLKKAL---SGGEMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMAFV 217 (629)
Q Consensus 141 ~~~~~~~~~~~i~IP~~~I~~~~G~~l~~~l---~~~~~v~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~~~~~~~~~f~ 217 (629)
+ .....||++.|+.++++.|++.+ +++ ++.+++.... . .....+|+++..... .+
T Consensus 158 ~-------~~~~~IP~~~Is~~~a~~L~~~l~~~~~g-~~~v~l~~~~-~---~~~~~~Nvi~~~~g~-~~--------- 215 (421)
T 2ek8_A 158 G-------SDASFVAAVGITKQEGDALAANLRAGEKI-TATVKVAGAE-V---KTLTSHNVIATKKPD-AN--------- 215 (421)
T ss_dssp S-------CCTTCCEEEEECHHHHHHHHHHHHTTCCC-EEEEEEESCE-E---EEEEEEEEEEEECCC-SS---------
T ss_pred C-------CCCCCccEEEeCHHHHHHHHHHhhhhccC-Cccccccccc-c---ccccccceEEEecCc-cc---------
Confidence 0 12468999999999999999999 444 4666665522 1 234467777654321 00
Q ss_pred HHhhHHHHHHhcCCceeEEEEEEEeccCcccccchhhhhhcccCCccCCCCCCCCCCCCCCcchhHHHHHHhhhhh
Q 006839 218 KEFRGPAQILEKGGYTQFTPHYITWYCPMTFTLSRQCKSQCINHGRYCAPDPEQDFSSGYEGKDVVLENLRQLCVF 293 (629)
Q Consensus 218 ~~~~~~~~~~~~~~~~~f~p~~~~~~c~~~~~~~~~~~~~ci~~Gryc~~dp~~~~~~~~~g~dvv~e~lrq~c~~ 293 (629)
. -+....+.+..||-+|.- |+. ..| +-+|.-+++|.+|.+--+
T Consensus 216 -------~-~~~~~~v~~~aH~D~v~~-----------------g~G-----a~D---~~~G~a~~le~~~~l~~~ 258 (421)
T 2ek8_A 216 -------K-KNTNDIIIIGSHHDSVEK-----------------APG-----AND---DASGVAVTLELARVMSKL 258 (421)
T ss_dssp -------T-TCCCCEEEEEEECCCCTT-----------------CCC-----TTT---THHHHHHHHHHHHHHTTS
T ss_pred -------C-CCCCCEEEEecccccCCC-----------------CCC-----CCC---CcHhHHHHHHHHHHHhcc
Confidence 0 001246778888877641 100 112 346888999999987643
No 32
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.94 E-value=4.3e-10 Score=102.71 Aligned_cols=85 Identities=29% Similarity=0.697 Sum_probs=63.2
Q ss_pred ccccCCCcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCCCcccCCCCCCCCCCCCCCc
Q 006839 411 AVCLSGETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHT 490 (629)
Q Consensus 411 ~~C~~~d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~~~~~C~~~~~~~~~ 490 (629)
..|. ++|+|..++ |. +++.|+++.++|.|.|++ ||. | +.|+++ ++|...+++|.+.
T Consensus 43 ~~c~--dideC~~~p--C~-----n~g~C~~~~~~y~C~C~~--G~~----G-~~C~~~--deC~~~~~~C~~~------ 98 (146)
T 1x7a_L 43 KQYV--DGDQCEPNP--CL-----NGGLCKDDINSYECWCQV--GFE----G-KNCELD--ATCNIKNGRCKQF------ 98 (146)
T ss_dssp ---------CCSSCS--SC-----TTCEEEECSSCEEEECCS--SEE----S-TTTCEE--CCTTSGGGSCSSB------
T ss_pred ccCC--CcCcCCCCC--CC-----CCCEeECCCCCEEEecCC--CCc----C-CcCCCC--ccccCCCCCCcCC------
Confidence 3588 999998654 98 669999999999999999 664 5 669987 8998776778654
Q ss_pred ccee-eeCC-CceeeCCCCcccCC-ccCCCCCCCC
Q 006839 491 YSAC-LDSE-NGKCQCPPGFKGDG-VKSCVDIDEC 522 (629)
Q Consensus 491 ~~~C-~~~~-~~~C~C~~Gf~g~~-~~~C~dideC 522 (629)
| +++. +|.|.|++||.+.+ ...|++++++
T Consensus 99 ---C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~~~~ 130 (146)
T 1x7a_L 99 ---CKTGADSKVLCSCTTGYRLAPDQKSCKPAVPF 130 (146)
T ss_dssp ---CCCCSSSCCCCBCCTTEEECTTSSSEEECSSS
T ss_pred ---CCCCCCCCEEeEcCCCcEeCCCCCcCCCCCCC
Confidence 9 8888 99999999999432 2459888775
No 33
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.92 E-value=2.3e-10 Score=122.04 Aligned_cols=81 Identities=27% Similarity=0.741 Sum_probs=26.1
Q ss_pred CCcccCCCCCCCCCCCCCCccceeeeCC-CceeeCCCCcccCC-ccCCCCCCCCCCCCCCCCCCCceeeCCCceeEecCC
Q 006839 471 PGKCKINNGGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDG-VKSCVDIDECKERKACQCSECSCKDTWGSYECTCSG 548 (629)
Q Consensus 471 ~~~C~~~~~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~-~~~C~dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~ 548 (629)
+|+|..++++|.+. |.+.. +|.|.|++||++.+ .+.|+|+|||...++|. +.|+|+.|+|.|.|++
T Consensus 3 ~~~C~~~~~~c~~~---------C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~---~~C~~~~g~~~C~C~~ 70 (386)
T 3v65_B 3 EENCNVNNGGCAQK---------CQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCS---QGCTNSEGAFQCWCEA 70 (386)
T ss_dssp ----------------------------------------------------------CCT---TEEC-----CCEECCT
T ss_pred cCcccCCCCCCCCC---------CcCCCCCcEeECCCCceECCCCCccCccceeCCcCccc---CcCCCCCCCCeEEECC
Confidence 48998888888765 97777 89999999999442 34599999998446898 6699999999999999
Q ss_pred CCcccCCCCcccccc
Q 006839 549 DLLYIRDHDTCISKT 563 (629)
Q Consensus 549 G~~~~~~g~~C~~~~ 563 (629)
||.+..++.+|+...
T Consensus 71 g~~l~~d~~~C~~~~ 85 (386)
T 3v65_B 71 GYELRPDRRSCKALG 85 (386)
T ss_dssp TEEECTTSSCEEECS
T ss_pred CceEcCCCCeECCcc
Confidence 999999999998754
No 34
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.91 E-value=1.8e-09 Score=98.16 Aligned_cols=96 Identities=33% Similarity=0.687 Sum_probs=70.6
Q ss_pred eccccC--CceeeeccCCCccCCCCccccCC-----------CcccccCCCCCCCCCcCCCccccc-------cCCCcee
Q 006839 388 RGKLEK--GAVLKAICSGFEETTEPAVCLSG-----------ETNECLDNNGGCWQDKTANVTACK-------DTFRGRV 447 (629)
Q Consensus 388 ~c~~~~--~~~~c~cc~Gf~~~~~~~~C~~~-----------d~deC~~~~~~C~~~~~~~~~~C~-------n~~g~~~ 447 (629)
.|.... +++.|.|.+||. +..|+.. ++++|...+ |. +++.|+ ++.++|.
T Consensus 13 ~C~~~~~~g~~~C~C~~G~~----G~~C~~~~~~~~~~~~c~~~~~C~~~~--C~-----~~g~C~~~~~~~~~~~~~~~ 81 (143)
T 4d90_A 13 ICLPGLADGSFSCECPDGFT----DPNCSSVVEVASDEEEPTSAGPCTPNP--CH-----NGGTCEISEAYRGDTFIGYV 81 (143)
T ss_dssp EEEC-----CCEEECCTTCC----TTTTCSCCCCTTTTTSCCCCCTTSSCC--CC-----TTCEEEECCCEETTEECCEE
T ss_pred EeeCCCCCCCEEeECCCCCC----CCCCccCccccccccccccCCcCCCCC--CC-----CCCEecCCCccccCCCCCeE
Confidence 344433 578999999994 5566510 345554333 65 779999 7889999
Q ss_pred eeeCCCCCeeEeCCCccccc-cCCCCcccCCCCCCCCCCCCCCccceeeeCC-CceeeCCCCcccCC
Q 006839 448 CECPLVDGVQFKGDGYSHCE-VSGPGKCKINNGGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDG 512 (629)
Q Consensus 448 C~C~~~~G~~~~~dg~~~C~-~~~~~~C~~~~~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~ 512 (629)
|.|++ ||. | ..|+ ++ ++|... +|... +.|+++. +|.|.|++||.|+.
T Consensus 82 C~C~~--G~~----G-~~C~~~i--~~C~~~--~C~~~-------~~C~~~~g~~~C~C~~G~~G~~ 130 (143)
T 4d90_A 82 CKCPR--GFN----G-IHCQHNI--NECEVE--PCKNG-------GICTDLVANYSCECPGEFMGRN 130 (143)
T ss_dssp EECCT--TEE----S-TTSCEEC--CTTTTC--CSCTT-------CEEEEETTEEEEECCTTCBSTT
T ss_pred eECcC--CCc----C-CCcccCC--CcCCCC--CCCCC-------CEeECCCCCeEeECCCCCccCC
Confidence 99999 763 5 5697 76 899743 67665 8899999 99999999999987
No 35
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.91 E-value=7.5e-10 Score=100.70 Aligned_cols=84 Identities=23% Similarity=0.528 Sum_probs=68.5
Q ss_pred cccccCCCCcccCCCCCCCCCCCCCCccceeeeCC-CceeeCCCCcccCCccCCCC-CCCCCC---C-CCCCCCCCceee
Q 006839 464 SHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDGVKSCVD-IDECKE---R-KACQCSECSCKD 537 (629)
Q Consensus 464 ~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~~~~C~d-ideC~~---~-~~C~~~~~~C~n 537 (629)
..|.++ ++|..+ +|.+. ++|+++. +|.|.|++||.|.. |++ +++|.. . +.|. ++|+|
T Consensus 42 ~~c~di--d~C~~~--pC~n~-------g~C~~~~g~y~C~C~~G~~G~~---C~~~~~~c~~c~~~~~~C~---~~C~~ 104 (142)
T 2c4f_L 42 ISYSDG--DQCASS--PCQNG-------GSCKDQLQSYICFCLPAFEGRN---CETHKDDQLICVNENGGCE---QYCSD 104 (142)
T ss_dssp HHHTTC--CGGGGC--CCCTT-------CEEEEETTEEEEECCTTEESTT---SCEEGGGCCSTTTGGGGCS---SEEEC
T ss_pred ccCCcc--CcCcCC--CcCCC-------CEEeCCCCCEEeeCCCCccCCc---cccCccccccccCCCCCcc---CEeEC
Confidence 357766 899853 78776 8899999 99999999999876 986 677632 2 3555 49999
Q ss_pred CCC-ceeEecCCCCcccCCCCccccccc
Q 006839 538 TWG-SYECTCSGDLLYIRDHDTCISKTA 564 (629)
Q Consensus 538 t~G-sy~C~C~~G~~~~~~g~~C~~~~~ 564 (629)
+.| +|+|.|++||.+..+|..|.....
T Consensus 105 ~~g~~y~C~C~~Gy~l~~dG~~C~~~~e 132 (142)
T 2c4f_L 105 HTGTKRSCRCHEGYSLLADGVSCTPTVE 132 (142)
T ss_dssp CTTSCCEEECCTTEEECTTSSCEEESSS
T ss_pred CCCCCEEEECCCCceECCCCCCCCCCCc
Confidence 999 999999999999999999987654
No 36
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.89 E-value=1.2e-09 Score=95.38 Aligned_cols=95 Identities=26% Similarity=0.617 Sum_probs=64.0
Q ss_pred CcccccCCC------CCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCC-CCcccCCCCCCCCCCCCCC
Q 006839 417 ETNECLDNN------GGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSG-PGKCKINNGGCWHESKDGH 489 (629)
Q Consensus 417 d~deC~~~~------~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~-~~~C~~~~~~C~~~~~~~~ 489 (629)
|+|||..++ +.|. +++.|+++.++|.|.|++ || .+ ..|+++. .++|...+++|.+
T Consensus 5 d~d~C~~~p~~~~C~~~C~-----~~g~C~~~~~~y~C~C~~--G~--~G---~~C~~~~~~~~C~~~~~~C~~------ 66 (114)
T 1aut_L 5 DGDQCLVLPLEHPCASLCC-----GHGTCIDGIGSFSCDCRS--GW--EG---RFCQREVSFLNCSLDNGGCTH------ 66 (114)
T ss_dssp ---CCCCCSSCCSSSSTTT-----TSEEECCCSSCCCEEECT--TE--ES---TTSCEECCSSSSSSGGGGCSS------
T ss_pred ecccccCCCccccccccCC-----CcCCCCCCCCCcEeeCCC--CC--cC---CCcCcCCcCCcCcCCCCCCCC------
Confidence 888998766 3355 679999999999999999 65 44 4498652 2478766666754
Q ss_pred ccceeeeCC-CceeeCCCCcccCC-ccCCCCCCCCCCCCCCCCCCCceee
Q 006839 490 TYSACLDSE-NGKCQCPPGFKGDG-VKSCVDIDECKERKACQCSECSCKD 537 (629)
Q Consensus 490 ~~~~C~~~~-~~~C~C~~Gf~g~~-~~~C~dideC~~~~~C~~~~~~C~n 537 (629)
.|+++. +|.|.|++||.+.. .+.|+++++ .+|. ..+.|+.
T Consensus 67 ---~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~~----~pC~-~~~~~i~ 108 (114)
T 1aut_L 67 ---YCLEEVGWRRCSCAPGYKLGDDLLQCHPAVK----FPCG-RPWKRME 108 (114)
T ss_dssp ---EEEECSSSEEEECCTTEEECTTSSCEEECSS----SCTT-CCC----
T ss_pred ---EeECCCCCEEeECCCCeeECCCCCccCcCcc----cCCC-CCCccCC
Confidence 499999 99999999999643 344776544 2566 4455543
No 37
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.89 E-value=3.3e-09 Score=120.05 Aligned_cols=108 Identities=21% Similarity=0.238 Sum_probs=68.8
Q ss_pred CCCCceeeEeccCCCcCCCCCCCCCCCcccc--CCCCCCcEEEEeCCCcCHHHHHHHHHHcCCcEEEEEECCCCC-----
Q 006839 60 YGGSMAGAVTYPKENRKGCREFGDFGISFKA--KPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEA----- 132 (629)
Q Consensus 60 ~~~~~~g~l~~~~~~~~gC~~~~~~~~~~~~--~~~~~~~i~Lv~RG~C~F~~K~~nAq~aGA~avII~n~~~~~----- 132 (629)
+.+.++|.+|+. ..|+.. ++. .+.. .....|+||||+||.|+|.+|+++||++||+|||||++..+.
T Consensus 123 ~~G~v~g~lV~v---~~G~~~-Df~--~L~~~~~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~ 196 (707)
T 3fed_A 123 AQGMPEGDLVYV---NYARTE-DFF--KLEREMGINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEV 196 (707)
T ss_dssp CCBCCEECEEEC---TTCCHH-HHH--HHHHTSCCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTC
T ss_pred CCCceEEEEEEe---cCCchh-hHH--HHHhccCCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhcccccc
Confidence 455689999984 256521 110 0000 112339999999999999999999999999999999863210
Q ss_pred ------------------ceecCCCCCc-cccc------------cccCcccccEEEEeHHHHHHHHHHHcC
Q 006839 133 ------------------LITMDTPEED-ISSA------------KYIENITIPSALIDKSFGETLKKALSG 173 (629)
Q Consensus 133 ------------------~~~m~~~~~~-~~~~------------~~~~~i~IP~~~I~~~~G~~l~~~l~~ 173 (629)
+..+..++|. +.+. .......||++-|++.||+.|++.|..
T Consensus 197 ~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 197 QPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGYPAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTSCCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred ccCCCCccCCCccccccceecccCCCCCCCCCCcccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 0000011110 0000 001236899999999999999998863
No 38
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.86 E-value=9.1e-10 Score=94.89 Aligned_cols=77 Identities=42% Similarity=0.795 Sum_probs=37.3
Q ss_pred CccccCCCcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCCCcccCCCCCCCCCCCCCC
Q 006839 410 PAVCLSGETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGH 489 (629)
Q Consensus 410 ~~~C~~~d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~~~~~C~~~~~~~~ 489 (629)
+..| ++|||..++++|. +.|+|+.++|.|.|++ ||... ++ +.|+++ ++|.. +.+|..
T Consensus 24 ~~~C---d~neC~~~~~~C~-------~~C~n~~g~y~C~C~~--Gy~g~-~g-~~C~di--deC~~-~~~C~~------ 80 (107)
T 2w2n_E 24 QGAM---GTNECLDNNGGCS-------YVCNDLKIGYECLCPD--GFQLV-AQ-RRCEDI--DECQD-PDTCSQ------ 80 (107)
T ss_dssp SCCB---SCCGGGTGGGGCS-------SEEECCSBSCEEECCT--TCEEE-TT-TEEEC---------------------
T ss_pred CCCC---cCccCcCCCCCCC-------CEeEeCCCCeEEECCC--Ccccc-CC-Cccccc--cccCC-CCCcCC------
Confidence 4456 5899998777897 7999999999999999 88764 56 789977 99974 346753
Q ss_pred ccceeeeCC-CceeeCCCCcccCC
Q 006839 490 TYSACLDSE-NGKCQCPPGFKGDG 512 (629)
Q Consensus 490 ~~~~C~~~~-~~~C~C~~Gf~g~~ 512 (629)
.|+|+. +|.|.|++||.++.
T Consensus 81 ---~C~n~~gsy~C~C~~Gy~~~~ 101 (107)
T 2w2n_E 81 ---LCVNLEGGYKCQCEEGFQLDP 101 (107)
T ss_dssp ------------------------
T ss_pred ---eeecCCCCEEEECCCCceECC
Confidence 499999 99999999999764
No 39
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.83 E-value=3.2e-09 Score=109.96 Aligned_cols=76 Identities=32% Similarity=0.802 Sum_probs=65.8
Q ss_pred CcccCCCCCCCCCCCCCCccceeeeCC-CceeeCCCCcccCCccCCC-CCCCCCCC--CCCCCCCCceeeCCCceeEecC
Q 006839 472 GKCKINNGGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDGVKSCV-DIDECKER--KACQCSECSCKDTWGSYECTCS 547 (629)
Q Consensus 472 ~~C~~~~~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~~~~C~-dideC~~~--~~C~~~~~~C~nt~Gsy~C~C~ 547 (629)
++|..+ +|.+. +.|.+.. +|.|.|++||.|.. |+ |+|||... ++|. ..|+|+.|+|.|.|+
T Consensus 6 ~~C~~~--pC~~~-------g~C~~~~~~~~C~C~~g~~g~~---C~~~~~eC~~~~~~~C~---~~C~~~~g~~~C~C~ 70 (317)
T 3h5c_B 6 SPCISQ--PCLHN-------GSCQDSIWGYTCTCSPGYEGSN---CELAKNECHPERTDGCQ---HFCLPGQESYTCSCA 70 (317)
T ss_dssp CCTTSC--CCTTT-------CCCCCCSSSCCCCCSSSCCSSS---SCCCSSSCCTTCTTSCS---SEEECCSSSCEEECC
T ss_pred CcCCCC--CCCCC-------CEeECCCCCeEEECCCCCcCCc---cccCcccCCCCCCCCCc---CccccCCCeeEEecc
Confidence 788754 57765 7899988 99999999999876 98 99999872 5898 499999999999999
Q ss_pred CCCcccCCCCccccc
Q 006839 548 GDLLYIRDHDTCISK 562 (629)
Q Consensus 548 ~G~~~~~~g~~C~~~ 562 (629)
+||.+..++..|.+.
T Consensus 71 ~g~~~~~~~~~C~~~ 85 (317)
T 3h5c_B 71 QGYRLGEDHKQCVPH 85 (317)
T ss_dssp TTEECCTTSSCCEEC
T ss_pred ccccccccccccccc
Confidence 999988888888874
No 40
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=98.83 E-value=3.7e-09 Score=99.10 Aligned_cols=117 Identities=29% Similarity=0.674 Sum_probs=83.8
Q ss_pred eeeeccCCCccCCCCccccCCCcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCCCccc
Q 006839 396 VLKAICSGFEETTEPAVCLSGETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCK 475 (629)
Q Consensus 396 ~~c~cc~Gf~~~~~~~~C~~~d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~ 475 (629)
..|.|.+||. +..|+ .++|.. .|.. .++.|.+ .|.|.|++ ||. | ..|+ +|.
T Consensus 50 g~C~C~~G~~----G~~C~---~~~C~~---~C~~----~~g~C~~---~~~C~C~~--G~~----G-~~C~-----~C~ 100 (169)
T 2vj2_A 50 GNKTCMEGWM----GPECN---RAICRQ---GCSP----KHGSCKL---PGDCRCQY--GWQ----G-LYCD-----KCI 100 (169)
T ss_dssp CCEEECTTEE----STTSC---EECCCT---TCCT----TTEECSS---TTCCEECT--TEE----S-SSSC-----EEC
T ss_pred CeeECCCCCc----CCCCC---CCCCCC---CCCC----CCcccCC---CCeeECCC--CCC----C-CCcc-----cCC
Confidence 4578999994 66786 355652 2530 2367876 58999999 664 4 4474 354
Q ss_pred CCCCCCCCCCCCCCccceeeeCCCceeeCCCCcccCCccCCC-CCCCCCCCCCCCCCCCceeeC-CCceeEecCCCCccc
Q 006839 476 INNGGCWHESKDGHTYSACLDSENGKCQCPPGFKGDGVKSCV-DIDECKERKACQCSECSCKDT-WGSYECTCSGDLLYI 553 (629)
Q Consensus 476 ~~~~~C~~~~~~~~~~~~C~~~~~~~C~C~~Gf~g~~~~~C~-dideC~~~~~C~~~~~~C~nt-~Gsy~C~C~~G~~~~ 553 (629)
..+ .|.+ ++|+ .+|.|.|++||.|.. |+ ++|+|....+|. ++++|+++ .++|+|.|++||+
T Consensus 101 ~~~-~C~~--------g~C~--~~~~C~C~~G~~G~~---C~~~~~~C~~~~~C~-~~g~C~~~~~~~~~C~C~~G~~-- 163 (169)
T 2vj2_A 101 PHP-GCVH--------GICN--EPWQCLCETNWGGQL---CDKDLNYCGTHQPCL-NGGTCSNTGPDKYQCSCPEGYS-- 163 (169)
T ss_dssp CCT-TCSS--------EECS--STTCCEECTTEETTT---TCEESCHHHHTCCCC-TTCEEEECSTTCEEEECCTTCC--
T ss_pred CCC-CCCC--------CCcC--CCCEEeCCCCCCCCc---ccCCCCCCCCCCCCC-CCCEEcCCCCCCcEeECCCCCc--
Confidence 321 3432 4565 368999999999876 97 999998644899 88999997 8999999999997
Q ss_pred CCCCccc
Q 006839 554 RDHDTCI 560 (629)
Q Consensus 554 ~~g~~C~ 560 (629)
|..|.
T Consensus 164 --G~~Ce 168 (169)
T 2vj2_A 164 --GPNCE 168 (169)
T ss_dssp --STTSC
T ss_pred --CcCcC
Confidence 45553
No 41
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.78 E-value=1.9e-09 Score=94.72 Aligned_cols=95 Identities=25% Similarity=0.511 Sum_probs=73.1
Q ss_pred eecccc-CCceeeeccCCCccCCCCccccCCCcccccC--CCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCc
Q 006839 387 YRGKLE-KGAVLKAICSGFEETTEPAVCLSGETNECLD--NNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGY 463 (629)
Q Consensus 387 ~~c~~~-~~~~~c~cc~Gf~~~~~~~~C~~~d~deC~~--~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~ 463 (629)
..|.+. .++|.|.|.+||... .+ ++++|.. .+++|. +.|++ .++|.|.|++ ||.+.. +
T Consensus 14 ~~C~~~~~g~y~C~C~~Gy~g~----~~---~~~~C~~~C~~~~C~-------~~C~~-~~~y~C~C~~--Gy~~~~-g- 74 (118)
T 1dx5_I 14 YQCQPLDQTSYLCVCAEGFAPI----PH---EPHRCQMFCNQTACP-------ADCDP-NTQASCECPE--GYILDD-G- 74 (118)
T ss_dssp SEEEECSSSCEEEECCTTEEEE----TT---EEEEEEECCCSSEEE-------CEECT-TSTTCEECCT--TEEEET-T-
T ss_pred CCCCCCCCCCEEeECCCCcccc----CC---CCCccccccCCCCCC-------CcccC-CCCeEeECCC--CccCCC-C-
Confidence 478888 899999999999632 11 3555543 133465 78998 5999999999 887765 6
Q ss_pred cccccCCCCcccCCCCCCCCCCCCCCccceeeeCC-CceeeCCCCcccCC
Q 006839 464 SHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDG 512 (629)
Q Consensus 464 ~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~ 512 (629)
+.|+++ ++|... ++| . +.|+++. +|.|.|++||.+.+
T Consensus 75 ~~C~di--deC~~~-~~C--~-------~~C~n~~g~y~C~C~~G~~g~~ 112 (118)
T 1dx5_I 75 FICTDI--DECENG-GFC--S-------GVCHNLPGTFECICGPDSALAG 112 (118)
T ss_dssp TEEEEC--CHHHHC-SSC--S-------SEEEECSSSEEEEECSSSSCEE
T ss_pred Cccccc--cccCCC-CCC--c-------CeEEeCCCCEEEECCCCCccCC
Confidence 789877 999863 577 2 5699999 99999999999764
No 42
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.76 E-value=4.6e-11 Score=118.26 Aligned_cols=147 Identities=10% Similarity=-0.031 Sum_probs=86.0
Q ss_pred eccccCCceeeeccCCCccCCCCccccCCCccc------ccCCC----------------CCCCCCcCCCccccccCCCc
Q 006839 388 RGKLEKGAVLKAICSGFEETTEPAVCLSGETNE------CLDNN----------------GGCWQDKTANVTACKDTFRG 445 (629)
Q Consensus 388 ~c~~~~~~~~c~cc~Gf~~~~~~~~C~~~d~de------C~~~~----------------~~C~~~~~~~~~~C~n~~g~ 445 (629)
+|.....+|.|.|..|| .+..|+. +++| |...| ..|..+++.++++|++..++
T Consensus 45 ~C~~g~~~y~C~Cp~Gf----~G~~Ce~-ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~~~~s 119 (267)
T 4fbr_A 45 KTLKGTMTYNGEGPIGF----RGTLSSA-NNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGTTT 119 (267)
T ss_dssp SEEEEEEEETTSCCEEE----EEEECST-TEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEEE
T ss_pred eecCCCCCeEEeCCCCc----ccccccc-cccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEEecCCcc
Confidence 34445567788888888 3455554 4554 21111 00111233478999999999
Q ss_pred eeeeeCCCCCeeEeCCCccccccCCCCcccCC----CCCCCCC--------C--------CCCCccceeeeCC-CceeeC
Q 006839 446 RVCECPLVDGVQFKGDGYSHCEVSGPGKCKIN----NGGCWHE--------S--------KDGHTYSACLDSE-NGKCQC 504 (629)
Q Consensus 446 ~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~~----~~~C~~~--------~--------~~~~~~~~C~~~~-~~~C~C 504 (629)
|+|+|++ || ++ ..|+. ++++|... ..+|.+. + .++...++|++.. +|.|.|
T Consensus 120 y~C~C~~--Gf--~G---~~Ce~-~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~~y~C~C 191 (267)
T 4fbr_A 120 YNGEGPI--GF--KS---EVTDG-DTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEG 191 (267)
T ss_dssp ETTSCCE--EE--EE---EECCC-CEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEEEETTSC
T ss_pred EEeeCCC--Cc--cc---cCCCC-CcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCCCeEEeC
Confidence 9999999 54 43 34653 23443321 1122111 0 0112237788888 999999
Q ss_pred CCCcccCCccCCC-CCCCCCCC----------------------------CCCCCCCCceeeCCCceeEecCCCCc
Q 006839 505 PPGFKGDGVKSCV-DIDECKER----------------------------KACQCSECSCKDTWGSYECTCSGDLL 551 (629)
Q Consensus 505 ~~Gf~g~~~~~C~-dideC~~~----------------------------~~C~~~~~~C~nt~Gsy~C~C~~G~~ 551 (629)
++||+|.. |+ +|+||... .+|. ++++|++...+|.|.|+.||+
T Consensus 192 p~Gf~G~~---c~~~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c~~~c~-ngGtC~dg~~sy~CeCp~GF~ 263 (267)
T 4fbr_A 192 PIGFRGTL---TSPDTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVALNVASS-DGGKTLAGTMIYNGEGPIGFR 263 (267)
T ss_dssp CEEEEEEE---EETTEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEEEEECS-STTSEEEEEEEETTSCCEEEE
T ss_pred CCCccccc---cccccceeccCCCccCCcccCCCeEEEecCCCCccccCCcCCC-CCCEeeCCCcceeecCCCCcc
Confidence 99999864 54 56663211 1345 556777776777777777775
No 43
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.75 E-value=1.5e-09 Score=99.29 Aligned_cols=104 Identities=25% Similarity=0.449 Sum_probs=75.3
Q ss_pred eccccCCceeeeccCCCccCCCCccccCCCcc-----------cccCCCCCCCCCcCCCccccccCCCc----------e
Q 006839 388 RGKLEKGAVLKAICSGFEETTEPAVCLSGETN-----------ECLDNNGGCWQDKTANVTACKDTFRG----------R 446 (629)
Q Consensus 388 ~c~~~~~~~~c~cc~Gf~~~~~~~~C~~~d~d-----------eC~~~~~~C~~~~~~~~~~C~n~~g~----------~ 446 (629)
.|.+..++|.|.|.+||.....+..|. +.+ .|......|. ....|.+..++ |
T Consensus 16 ~C~n~~g~y~C~C~~G~~g~~~~~~C~--~~~~~~C~~~~~g~~C~~~~~~c~-----~~~~C~~~~g~~~g~~C~~c~~ 88 (147)
T 2w86_A 16 VCKNSPGSFICECSSESTLDPTKTICI--ETIKGTCWQTVIDGRCEININGAT-----LKSQCCSSLGAAWGSPCTLCQV 88 (147)
T ss_dssp EEEEETTEEEEECCTTEEECTTSSBEE--ECCCEEEEEEEETTEEEEEEEEEE-----CHHHHHTTTCSEETTTTEECCC
T ss_pred EeECCCCCEEeECCCCcccCCCCCeec--CCCCCcccCCCCCCccccCCCccc-----cCCccccCcCcccCCCcccCCC
Confidence 688889999999999998665666776 432 2322222232 12345555544 7
Q ss_pred eeeeCCCCCeeEeCCCccccccCCCCcccCCCCCCCCCCCCCCccceeeeCC-CceeeCCCCcccCC
Q 006839 447 VCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDG 512 (629)
Q Consensus 447 ~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~ 512 (629)
.|.|++ ||... +| +.|+++ |+|...++.|.+ +.|+++. +|.|.|++||.++.
T Consensus 89 ~C~C~~--Gy~~~-~g-~~C~di--deC~~~~~~C~~--------g~C~n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 89 DPICGK--GYSRI-KG-TQCEDI--DECEVFPGVCKN--------GLCVNTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp CTTTCT--TEEEE-ET-TEEEEC--CHHHHSTTCSSS--------SEEEEETTEEEEECCTTCCBCT
T ss_pred cccCCC--ccccC-CC-CccCcc--ccccCCCCCCCC--------CEEECCCCCEEeeCCCCCccCC
Confidence 889999 88652 46 789977 999987777863 5799999 99999999999875
No 44
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.74 E-value=8.3e-09 Score=110.43 Aligned_cols=80 Identities=41% Similarity=0.825 Sum_probs=66.0
Q ss_pred ccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCCCcccCCCCCCCCCCCCCCccceeeeCC
Q 006839 419 NECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSE 498 (629)
Q Consensus 419 deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~~~ 498 (629)
|||..++..|. +.|.|++++|.|.|++ ||.+ .++ +.|+++ +||.. +++|.+. |.|+.
T Consensus 1 ~eC~~~~~~c~-------~~C~~~~~~y~C~C~~--G~~~-~~~-~~C~di--deC~~-~~~C~~~---------C~n~~ 57 (400)
T 3p5b_L 1 NECLDNNGGCS-------HVCNDLKIGYECLCPD--GFQL-VAQ-RRCEDI--DECQD-PDTCSQL---------CVNLE 57 (400)
T ss_dssp CCTTTTGGGCS-------SEEEECSSSEEEECCT--TEEE-CSS-SCEEEC--CCCST-TSSCSSC---------CBCCS
T ss_pred CcccCCCCCCC-------CEeECCCCCeEEECCC--CCCc-CCC-CcccCc--hhhhc-cCCCCCc---------cCCCc
Confidence 68988777776 8999999999999999 9987 567 889987 99983 4578655 99999
Q ss_pred -CceeeCCCCcccCC-ccCCCCCCC
Q 006839 499 -NGKCQCPPGFKGDG-VKSCVDIDE 521 (629)
Q Consensus 499 -~~~C~C~~Gf~g~~-~~~C~dide 521 (629)
+|.|.|++||.+.. .+.|.++++
T Consensus 58 g~~~C~C~~g~~~~~~~~~C~~~~~ 82 (400)
T 3p5b_L 58 GGYKCQCEEGFQLDPHTKACKAVGS 82 (400)
T ss_dssp SSCBCCCCTTCCCCTTTSSCCCSTT
T ss_pred cceeeeccccccccccccceeeccc
Confidence 99999999999764 355776654
No 45
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.73 E-value=1.9e-09 Score=114.88 Aligned_cols=83 Identities=29% Similarity=0.672 Sum_probs=21.7
Q ss_pred CcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCCCcccCCCCCCCCCCCCCCccceeee
Q 006839 417 ETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLD 496 (629)
Q Consensus 417 d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~ 496 (629)
|+|||..++++|. +.|.++.|+|.|.|++ ||.+.+++ +.|+++ +||. .+++|.+. |.|
T Consensus 2 ~~~~C~~~~~~c~-------~~C~~~~g~~~C~C~~--G~~l~~~~-~~C~d~--~eC~-~~~~C~~~---------C~~ 59 (386)
T 3v65_B 2 GEENCNVNNGGCA-------QKCQMIRGAVQCTCHT--GYRLTEDG-RTCQDV--NECA-EEGYCSQG---------CTN 59 (386)
T ss_dssp ---------------------------------------------------------------CCTTE---------EC-
T ss_pred CcCcccCCCCCCC-------CCCcCCCCCcEeECCC--CceECCCC-CccCcc--ceeC-CcCcccCc---------CCC
Confidence 7899998888897 7999999999999999 99988888 899887 9997 45688765 999
Q ss_pred CC-CceeeCCCCcccCC-ccCCCCCCC
Q 006839 497 SE-NGKCQCPPGFKGDG-VKSCVDIDE 521 (629)
Q Consensus 497 ~~-~~~C~C~~Gf~g~~-~~~C~dide 521 (629)
+. +|.|.|++||.... .+.|..+++
T Consensus 60 ~~g~~~C~C~~g~~l~~d~~~C~~~~~ 86 (386)
T 3v65_B 60 SEGAFQCWCEAGYELRPDRRSCKALGP 86 (386)
T ss_dssp ----CCEECCTTEEECTTSSCEEECSS
T ss_pred CCCCCeEEECCCceEcCCCCeECCccc
Confidence 99 99999999998543 345876554
No 46
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.67 E-value=2.9e-09 Score=101.37 Aligned_cols=83 Identities=27% Similarity=0.668 Sum_probs=30.4
Q ss_pred cccCCCcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCC-CcccCCCCCCCCCCCCCCc
Q 006839 412 VCLSGETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGP-GKCKINNGGCWHESKDGHT 490 (629)
Q Consensus 412 ~C~~~d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~-~~C~~~~~~C~~~~~~~~~ 490 (629)
.|. ++|+|..++ |. +++.|+++.++|.|.|++ ||. | +.|++. + ++|...+++|.+.
T Consensus 38 ~c~--dideC~~~p--C~-----ngg~C~n~~g~y~C~C~~--Gf~----G-~~Ce~~-i~deC~~~~~~C~~~------ 94 (195)
T 1nfu_B 38 KYK--DGDQCETSP--CQ-----NQGKCKDGLGEYTCTCLE--GFE----G-KNCELF-TRKLCSLDNGDCDQF------ 94 (195)
T ss_dssp ------------------------------------------------------------CCGGGTGGGGCSSE------
T ss_pred cCC--CCcccCCCC--CC-----CCCEeECCCCCeeEeCCC--Cce----e-cccccc-ccccccCCCCCCCCE------
Confidence 588 999998654 98 669999999999999999 664 5 669863 3 6898766678654
Q ss_pred cceeeeCC-CceeeCCCCcccCC-ccCCCCCC
Q 006839 491 YSACLDSE-NGKCQCPPGFKGDG-VKSCVDID 520 (629)
Q Consensus 491 ~~~C~~~~-~~~C~C~~Gf~g~~-~~~C~did 520 (629)
|+++. +|.|.|++||.+.+ ...|++++
T Consensus 95 ---C~n~~gsy~C~C~~Gy~l~~dG~~C~~~~ 123 (195)
T 1nfu_B 95 ---CHEEQNSVVCSCARGYTLADNGKACIPTG 123 (195)
T ss_dssp ---EEEETTEEEEECCTTEEECTTSSCEEESS
T ss_pred ---eECCCCCeEEECCCCceeCCCCCccccCC
Confidence 99999 99999999999322 23488765
No 47
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.66 E-value=2.1e-08 Score=103.82 Aligned_cols=83 Identities=31% Similarity=0.820 Sum_probs=66.1
Q ss_pred CcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccc-cCCCCcccCC-CCCCCCCCCCCCcccee
Q 006839 417 ETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCE-VSGPGKCKIN-NGGCWHESKDGHTYSAC 494 (629)
Q Consensus 417 d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~-~~~~~~C~~~-~~~C~~~~~~~~~~~~C 494 (629)
|+|+|..++ |. +++.|.++.++|.|.|++ ||. | +.|+ ++ ++|... +++|.+. |
T Consensus 4 d~~~C~~~p--C~-----~~g~C~~~~~~~~C~C~~--g~~----g-~~C~~~~--~eC~~~~~~~C~~~---------C 58 (317)
T 3h5c_B 4 GGSPCISQP--CL-----HNGSCQDSIWGYTCTCSP--GYE----G-SNCELAK--NECHPERTDGCQHF---------C 58 (317)
T ss_dssp --CCTTSCC--CT-----TTCCCCCCSSSCCCCCSS--SCC----S-SSSCCCS--SSCCTTCTTSCSSE---------E
T ss_pred cCCcCCCCC--CC-----CCCEeECCCCCeEEECCC--CCc----C-CccccCc--ccCCCCCCCCCcCc---------c
Confidence 788998765 87 679999999999999999 664 5 5698 66 999863 3578654 9
Q ss_pred eeCC-CceeeCCCCcccCC-ccCCCCCCCCCC
Q 006839 495 LDSE-NGKCQCPPGFKGDG-VKSCVDIDECKE 524 (629)
Q Consensus 495 ~~~~-~~~C~C~~Gf~g~~-~~~C~dideC~~ 524 (629)
.++. +|.|.|++||.+.. ...|.++++|.-
T Consensus 59 ~~~~g~~~C~C~~g~~~~~~~~~C~~~~~c~c 90 (317)
T 3h5c_B 59 LPGQESYTCSCAQGYRLGEDHKQCVPHDQCAC 90 (317)
T ss_dssp ECCSSSCEEECCTTEECCTTSSCCEECSSCCC
T ss_pred ccCCCeeEEecccccccccccccccccccccc
Confidence 9999 99999999999764 456999999853
No 48
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.62 E-value=5.1e-09 Score=94.13 Aligned_cols=84 Identities=26% Similarity=0.665 Sum_probs=30.6
Q ss_pred cccCCCcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCC-CcccCCCCCCCCCCCCCCc
Q 006839 412 VCLSGETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGP-GKCKINNGGCWHESKDGHT 490 (629)
Q Consensus 412 ~C~~~d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~-~~C~~~~~~C~~~~~~~~~ 490 (629)
.|. ++|+|..++ |. +++.|+++.++|.|.|++ ||. | +.|++. + ++|...+++|.+
T Consensus 38 ~c~--d~d~C~~~p--C~-----n~g~C~~~~~~y~C~C~~--G~~----G-~~C~~~-i~d~C~~~~~~C~~------- 93 (134)
T 2vh0_B 38 KYK--DGDQCETSP--CQ-----NQGKCKDGLGEYTCTCLE--GFE----G-KNCELF-TRKLCSLDNGDCDQ------- 93 (134)
T ss_dssp ------------------------------------------------------------CCGGGTGGGGCSS-------
T ss_pred cCC--CcCcCCCCC--CC-----CcCCcccCCCCEEeeCCC--Ccc----C-CccccC-CCCccccCCCCCCC-------
Confidence 577 899998654 97 668999999999999999 664 5 569863 3 679876667764
Q ss_pred cceeeeCC-CceeeCCCCcccCC-ccCCCCCCC
Q 006839 491 YSACLDSE-NGKCQCPPGFKGDG-VKSCVDIDE 521 (629)
Q Consensus 491 ~~~C~~~~-~~~C~C~~Gf~g~~-~~~C~dide 521 (629)
.|+++. +|.|.|++||.+.+ .+.|+++++
T Consensus 94 --~C~~~~g~y~C~C~~Gy~l~~~g~~C~~~~~ 124 (134)
T 2vh0_B 94 --FCHEEQNSVVCSCARGYTLADNGKACIPTGP 124 (134)
T ss_dssp --EEEEETTEEEEECCTTEEECTTSSCEEESSS
T ss_pred --EeECCCCCEEEECCCCcEECCCCCccCcCCC
Confidence 499999 99999999999432 234887754
No 49
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.61 E-value=2.7e-08 Score=90.35 Aligned_cols=83 Identities=28% Similarity=0.613 Sum_probs=61.4
Q ss_pred cccCCCcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCcccccc-CCCCcc---cCCCCCCCCCCCC
Q 006839 412 VCLSGETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEV-SGPGKC---KINNGGCWHESKD 487 (629)
Q Consensus 412 ~C~~~d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~-~~~~~C---~~~~~~C~~~~~~ 487 (629)
.|. ++|+|..++ |. +++.|+++.++|.|.|++ ||. | +.|++ + ++| ...+++|.+
T Consensus 43 ~c~--did~C~~~p--C~-----n~g~C~~~~g~y~C~C~~--G~~----G-~~C~~~~--~~c~~c~~~~~~C~~---- 100 (142)
T 2c4f_L 43 SYS--DGDQCASSP--CQ-----NGGSCKDQLQSYICFCLP--AFE----G-RNCETHK--DDQLICVNENGGCEQ---- 100 (142)
T ss_dssp HHT--TCCGGGGCC--CC-----TTCEEEEETTEEEEECCT--TEE----S-TTSCEEG--GGCCSTTTGGGGCSS----
T ss_pred cCC--ccCcCcCCC--cC-----CCCEEeCCCCCEEeeCCC--Ccc----C-CccccCc--cccccccCCCCCccC----
Confidence 577 899998654 98 668999999999999999 764 5 56985 3 454 323344443
Q ss_pred CCccceeeeCC--CceeeCCCCcccCC-ccCCCCCCC
Q 006839 488 GHTYSACLDSE--NGKCQCPPGFKGDG-VKSCVDIDE 521 (629)
Q Consensus 488 ~~~~~~C~~~~--~~~C~C~~Gf~g~~-~~~C~dide 521 (629)
.|+++. +|.|.|++||.+.+ .+.|+++++
T Consensus 101 -----~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~~~e 132 (142)
T 2c4f_L 101 -----YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE 132 (142)
T ss_dssp -----EEECCTTSCCEEECCTTEEECTTSSCEEESSS
T ss_pred -----EeECCCCCCEEEECCCCceECCCCCCCCCCCc
Confidence 498876 89999999999332 244988887
No 50
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.58 E-value=4.2e-10 Score=111.39 Aligned_cols=135 Identities=11% Similarity=-0.079 Sum_probs=91.1
Q ss_pred eeeccccCCceeeeccCCCccCCCCccccCCCcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccc
Q 006839 386 QYRGKLEKGAVLKAICSGFEETTEPAVCLSGETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSH 465 (629)
Q Consensus 386 ~~~c~~~~~~~~c~cc~Gf~~~~~~~~C~~~d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~ 465 (629)
.|.+.+..+++.+.+.+|..- ..+..|.. +++++.. .|. ++++|++..++|.|.|++ || .+ ..
T Consensus 3 ~~~~~n~~Gg~s~~~~pgg~~-~~g~~~~~-n~~~~~~---~c~-----ngG~C~~g~~~y~C~Cp~--Gf--~G---~~ 65 (267)
T 4fbr_A 3 AYLVQNQWGGSQATWNPGGLW-LIGARDKQ-NVVALDI---KSD-----DGGKTLKGTMTYNGEGPI--GF--RG---TL 65 (267)
T ss_dssp EEEEEEECSSTTSCCEEEEEE-ECCCCSSC-CEEEEEE---ECS-----STTSEEEEEEEETTSCCE--EE--EE---EE
T ss_pred eeeEeecCCcccCCcCCCCce-eecccccc-ccccCCC---CcC-----CCCeecCCCCCeEEeCCC--Cc--cc---cc
Confidence 366778888888888877321 13334442 4444432 366 779999999999999999 55 43 33
Q ss_pred cccCCCCc-----------------------------ccCCCCCCCCCCCCCCccceeeeCC-CceeeCCCCcccCCccC
Q 006839 466 CEVSGPGK-----------------------------CKINNGGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDGVKS 515 (629)
Q Consensus 466 C~~~~~~~-----------------------------C~~~~~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~~~~ 515 (629)
|+. ++++ |.+. +|... ++|++.. +|.|.|++||+|..
T Consensus 66 Ce~-ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~--pC~ng-------G~C~~~~~sy~C~C~~Gf~G~~--- 132 (267)
T 4fbr_A 66 SSA-NNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSI--KSNDG-------GKTLTGTTTYNGEGPIGFKSEV--- 132 (267)
T ss_dssp CST-TEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEE--ECSST-------TSEEEEEEEETTSCCEEEEEEE---
T ss_pred ccc-cccccccccCcCCCcccCCCeeeccCccccccccCCC--CCCCC-------CEEecCCccEEeeCCCCccccC---
Confidence 542 2344 2221 23333 7898888 99999999999764
Q ss_pred CC-CCCC-----------------------------CCCCCCCCCCCCceeeCCCceeEecCCCCcc
Q 006839 516 CV-DIDE-----------------------------CKERKACQCSECSCKDTWGSYECTCSGDLLY 552 (629)
Q Consensus 516 C~-dide-----------------------------C~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~ 552 (629)
|+ ++|+ |.. .+|. ++++|++..++|+|.|++||+.
T Consensus 133 Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~-~~c~-ngg~C~dg~~~y~C~Cp~Gf~G 197 (267)
T 4fbr_A 133 TDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVD-AKSN-DGGKTLSGTMTYNGEGPIGFRG 197 (267)
T ss_dssp CCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEE-EECS-STTSEEEEEEEETTSCCEEEEE
T ss_pred CCCCcccccccCCcCCccccCCcceecccccccccccCC-CCCC-CCCEeeCCCCCeEEeCCCCccc
Confidence 42 3333 112 2567 7899999999999999999973
No 51
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.57 E-value=5.6e-08 Score=81.04 Aligned_cols=86 Identities=20% Similarity=0.426 Sum_probs=63.1
Q ss_pred ceeeeccCCCccCCCCccccCCCcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCCCcc
Q 006839 395 AVLKAICSGFEETTEPAVCLSGETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKC 474 (629)
Q Consensus 395 ~~~c~cc~Gf~~~~~~~~C~~~d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C 474 (629)
+|.|.|.+||. +..| ++|+|... .|.|..++|.|.|++ ||. .|+.+++++|
T Consensus 1 sy~C~C~~g~~----g~~c---~~~~c~~~-------------pC~n~~~~y~C~C~~--G~~-------~C~~~~~~~C 51 (91)
T 1tpg_A 1 SYQVICRDEKT----QMIY---QQHQSWLR-------------PVLRSNRVEYCWCNS--GRA-------QCHSVPVKSC 51 (91)
T ss_dssp CCCCCCBCSSS----CCBC---CSSCEEEE-------------ECSSSSCEEEEECSS--SCC-------BCCEECEEEC
T ss_pred CeeeECCCCCc----CCeE---CCCcccCC-------------ccccCCCCcEeECCC--CCc-------ccccCcCCcc
Confidence 46788999994 4455 46777543 355678999999999 663 4862123889
Q ss_pred cCCCCCCCCCCCCCCccceeeeCC---CceeeCCCCcccCCccCCC-CCCC
Q 006839 475 KINNGGCWHESKDGHTYSACLDSE---NGKCQCPPGFKGDGVKSCV-DIDE 521 (629)
Q Consensus 475 ~~~~~~C~~~~~~~~~~~~C~~~~---~~~C~C~~Gf~g~~~~~C~-dide 521 (629)
..+ +|.+. +.|++.. +|.|.|++||.|.. |+ +|||
T Consensus 52 ~~~--pC~ng-------g~C~~~~~~~~~~C~C~~G~~G~~---Ce~~ide 90 (91)
T 1tpg_A 52 SEP--RCFNG-------GTCQQALYFSDFVCQCPEGFAGKS---CEIDTRA 90 (91)
T ss_dssp SSC--CSCTT-------CEEEEESSSSCEEEECCTTCBSSS---CCBCSSC
T ss_pred cCC--CCCCC-------CEeecCCCCCCeEeECCCCCcCCc---CCcCCCC
Confidence 754 68776 8898763 89999999999876 86 7776
No 52
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.57 E-value=1.2e-07 Score=106.31 Aligned_cols=102 Identities=22% Similarity=0.217 Sum_probs=67.4
Q ss_pred CCCceeeEeccCCCcCCCCCCCCCC--CccccCCCCCCcEEEEeCCCcCHHHHHHHHHHcCCcEEEEEECCCCCce-e--
Q 006839 61 GGSMAGAVTYPKENRKGCREFGDFG--ISFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALI-T-- 135 (629)
Q Consensus 61 ~~~~~g~l~~~~~~~~gC~~~~~~~--~~~~~~~~~~~~i~Lv~RG~C~F~~K~~nAq~aGA~avII~n~~~~~~~-~-- 135 (629)
.+.++|.+|+. ..|+.. ++.. .+++ ||||||+||.|+|..|+.+|+++||+|||||++..+... .
T Consensus 105 ~g~v~g~lV~v---g~G~~~-D~~~l~vdv~------GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~ 174 (640)
T 3kas_A 105 AATVTGKLVHA---NFGTKK-DFEDLYTPVN------GSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAE 174 (640)
T ss_dssp CEEEEECEEEC---TTCCHH-HHHTCSSCCT------TSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTT
T ss_pred CCceEEEEEEe---cCCChh-hHHHhhcccC------CcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccc
Confidence 45588999884 245532 1111 1333 999999999999999999999999999999998642110 0
Q ss_pred --------cCCCCCccccc-----------cccCcccccEEEEeHHHHHHHHHHHc
Q 006839 136 --------MDTPEEDISSA-----------KYIENITIPSALIDKSFGETLKKALS 172 (629)
Q Consensus 136 --------m~~~~~~~~~~-----------~~~~~i~IP~~~I~~~~G~~l~~~l~ 172 (629)
++.+++-+.+. .......||++.|++.+|+.|++.+.
T Consensus 175 ~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 175 LSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSSGLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCCEECCSSSSCSCCCSSCC---CCCCCCSSCCCCSSCEEECCHHHHHHHHTTEE
T ss_pred cccccccccCCCCCCCCCcccccccccccccccCCCCCCEEecCHHHHHHHHHHcc
Confidence 00000000000 00113479999999999999998875
No 53
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.56 E-value=1.2e-07 Score=107.07 Aligned_cols=122 Identities=21% Similarity=0.434 Sum_probs=87.2
Q ss_pred cCCcee---eeccCCCccCCCCccccCCCc--------ccccCCC--CCCCCCcCCCccccccCCCceeeeeC----CCC
Q 006839 392 EKGAVL---KAICSGFEETTEPAVCLSGET--------NECLDNN--GGCWQDKTANVTACKDTFRGRVCECP----LVD 454 (629)
Q Consensus 392 ~~~~~~---c~cc~Gf~~~~~~~~C~~~d~--------deC~~~~--~~C~~~~~~~~~~C~n~~g~~~C~C~----~~~ 454 (629)
..+.+. |.|.+|| .|..|+. ++ ++|...+ ..|. +++.|.+ +.|.|+ +
T Consensus 451 g~G~~~~G~C~C~~Gy----~G~~Ce~-~~~~~~~~~~~~C~~~~~~~~Cs-----~~G~C~~----g~C~C~~~~~~-- 514 (690)
T 3fcs_B 451 GNGTFECGVCRCGPGW----LGSQCEC-SEEDYRPSQQDECSPREGQPVCS-----QRGECLC----GQCVCHSSDFG-- 514 (690)
T ss_dssp TSEEEETTEEEECTTC----CSSSSCC-SCC------CCCCSSSSSSCGGG-----GSEEECS----SSEEECCCSSC--
T ss_pred CCCeEeCCceEeCCCc----cCCceee-ccCccCCccCCcCCCCCCCCCCC-----CCCEEEC----CeeEeecCCCC--
Confidence 345566 8899999 5777863 33 6786543 2476 6799984 689999 7
Q ss_pred CeeEeCCCccccccCCCCcccCCC-CCCCCCCCCCCccceeeeCCCceeeCCCCcccCCccCCC---CCCCCCCC--CCC
Q 006839 455 GVQFKGDGYSHCEVSGPGKCKINN-GGCWHESKDGHTYSACLDSENGKCQCPPGFKGDGVKSCV---DIDECKER--KAC 528 (629)
Q Consensus 455 G~~~~~dg~~~C~~~~~~~C~~~~-~~C~~~~~~~~~~~~C~~~~~~~C~C~~Gf~g~~~~~C~---dideC~~~--~~C 528 (629)
| |.| ..|+- +.++|.... ..|... +.|.+ +.|.|++||.|.. |+ ++++|... .+|
T Consensus 515 G--y~G---~~Ce~-~~~~C~~~~~~~C~~~-------G~C~~---g~C~C~~Gy~G~~---CeC~~~~~~C~~~~g~~C 575 (690)
T 3fcs_B 515 K--ITG---KYCEC-DDFSCVRYKGEMCSGH-------GQCSC---GDCLCDSDWTGYY---CNCTTRTDTCMSSNGLLC 575 (690)
T ss_dssp C--CBS---TTSCB-CSSCCCBSSSSBGGGS-------EEEET---TEEEECTTEESSS---SCEECCCTTTBCTTSSBT
T ss_pred C--eeC---CCcCc-ccCcCcCCCCCCCCCC-------CEecC---CeeECcCCCcCCC---CccCCCCCcccCCCCCCC
Confidence 4 444 45862 236786432 346544 78875 8999999999987 75 78999863 579
Q ss_pred CCCCCceeeCCCceeEec-CCCCccc
Q 006839 529 QCSECSCKDTWGSYECTC-SGDLLYI 553 (629)
Q Consensus 529 ~~~~~~C~nt~Gsy~C~C-~~G~~~~ 553 (629)
. ++++|++ ..|.| .+||.+.
T Consensus 576 ~-~~G~C~~----g~C~C~~~Gy~G~ 596 (690)
T 3fcs_B 576 S-GRGKCEC----GSCVCIQPGSYGD 596 (690)
T ss_dssp S-SSCEEET----TEEECCSTTCBST
T ss_pred C-CCCEEeC----CEEECCCCCccCC
Confidence 8 8899986 29999 9999743
No 54
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.47 E-value=1.4e-07 Score=109.13 Aligned_cols=84 Identities=40% Similarity=0.811 Sum_probs=69.2
Q ss_pred CcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCCCcccCCCCCCCCCCCCCCccceeee
Q 006839 417 ETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLD 496 (629)
Q Consensus 417 d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~ 496 (629)
+++||..+++.|. +.|.|++++|.|.|++ ||.+ .++ +.|+++ +||. .++.|.+. |+|
T Consensus 311 ~~~~C~~~~~~C~-------~~C~~~~~~y~C~C~~--Gy~l-~~g-~~C~di--deC~-~~~~C~~~---------C~n 367 (791)
T 3m0c_C 311 GTNECLDNNGGCS-------HVCNDLKIGYECLCPD--GFQL-VAQ-RRCEDI--DECQ-DPDTCSQL---------CVN 367 (791)
T ss_dssp SCCSTTTGGGGCS-------SEEEECSBSEEEECCT--TCEE-ETT-TEEECC--CCCS-SSSSCTTT---------CCB
T ss_pred ccccccccccCcc-------ccccCCCCCcccCCCC--CCcc-CCC-CccccC--cccC-CCCCCCCe---------eec
Confidence 3678877777787 7999999999999999 9987 567 889987 9998 45678655 999
Q ss_pred CC-CceeeCCCCcccCC-ccCCCCCCCCC
Q 006839 497 SE-NGKCQCPPGFKGDG-VKSCVDIDECK 523 (629)
Q Consensus 497 ~~-~~~C~C~~Gf~g~~-~~~C~dideC~ 523 (629)
+. +|.|.|++||.+.. .+.|.+++++.
T Consensus 368 ~~gsy~C~C~~Gy~l~~~~~~C~~~~~~p 396 (791)
T 3m0c_C 368 LEGGYKCQCEEGFQLDPHTKACKAVGSIA 396 (791)
T ss_dssp CSSCBCCCCCSSEECCSSCCCCEETTSCC
T ss_pred CCCCceeecCCCCEeCCCCceeeeccccc
Confidence 99 99999999999754 35698887764
No 55
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.36 E-value=4.1e-07 Score=104.22 Aligned_cols=83 Identities=41% Similarity=0.798 Sum_probs=68.1
Q ss_pred CcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCCCcccCCCCCCCCCCCCCCccceeee
Q 006839 417 ETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLD 496 (629)
Q Consensus 417 d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~ 496 (629)
++|||..++++|. +.|.|++++|.|.|++ ||.+ .++ +.|+++ +||.. +++|.+. |+|
T Consensus 293 ~~~eC~~~~~~C~-------~~C~~~~~~~~C~C~~--G~~~-~~~-~~C~di--deC~~-~~~C~~~---------C~n 349 (699)
T 1n7d_A 293 GTNECLDNNGGCS-------HVCNDLKIGYECLCPD--GFQL-VAQ-RRCEDI--DECQD-PDTCSQL---------CVN 349 (699)
T ss_dssp CCCCTTSSTTTSC-------TTCCCCTTCCCCCCCS--SSCC-CSS-SCCCCC--CCCSS-SSSCTTT---------CCB
T ss_pred ccccccccccCcC-------CCcccCCCCcEEeCCC--CeEc-CCC-CcccCc--cccCC-CCccccc---------ccc
Confidence 4789988777887 7999999999999999 8887 567 889987 99974 4578655 999
Q ss_pred CC-CceeeCCCCcccCC-ccCCCCCCCC
Q 006839 497 SE-NGKCQCPPGFKGDG-VKSCVDIDEC 522 (629)
Q Consensus 497 ~~-~~~C~C~~Gf~g~~-~~~C~dideC 522 (629)
+. +|.|.|++||.+.. .++|.++++.
T Consensus 350 ~~g~y~C~C~~G~~~~~~~~~C~~~~~~ 377 (699)
T 1n7d_A 350 LEGGYKCQCEEGFQLDPHTKACKAVGSI 377 (699)
T ss_dssp CSSCBCCCCCSSCBCCSSCCCCBCCSSC
T ss_pred CCCCeeeeeecccccCCCCCcccccccc
Confidence 99 99999999999764 3558766543
No 56
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=98.33 E-value=3.4e-07 Score=67.90 Aligned_cols=42 Identities=36% Similarity=0.812 Sum_probs=37.0
Q ss_pred CCCCCCCCC---------CCCCCCCCceeeCCCceeEecCCCCcccCCCCcccc
Q 006839 517 VDIDECKER---------KACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCIS 561 (629)
Q Consensus 517 ~dideC~~~---------~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~~ 561 (629)
+|||||... ++|. +.|+|+.|+|.|.|++||.+..++.+|.+
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~---~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~~ 52 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ---HLCHNYVGGYFCSCRPGYELQEDRHSCQA 52 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS---SEEEEETTEEEEECSTTCEECTTSSCEEC
T ss_pred CccccccCcccccccccCCCCC---CEeECCCCCeEEECCCCCeECCCCCccCC
Confidence 589999862 4787 79999999999999999999999999975
No 57
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=98.31 E-value=4e-07 Score=94.15 Aligned_cols=107 Identities=30% Similarity=0.799 Sum_probs=46.9
Q ss_pred ceeeeccCCCccCCCCccccCCCcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCCCcc
Q 006839 395 AVLKAICSGFEETTEPAVCLSGETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKC 474 (629)
Q Consensus 395 ~~~c~cc~Gf~~~~~~~~C~~~d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C 474 (629)
.+.|.|.+|| .+..|+ .++|.. .|. +++.|.+ .+.|.|++ ||. | ..|+. +.|
T Consensus 164 ~~~C~C~~G~----~G~~C~---~~~C~~---~C~-----~~G~C~~---~~~C~C~~--G~~----G-~~C~~---~~C 215 (324)
T 2ygq_A 164 RRICECPDGF----HGPHCE---KALCTP---RCM-----NGGLCVT---PGFCICPP--GFY----G-VNCDK---ANC 215 (324)
T ss_dssp TSCEECCTTE----ESSSSC---EESSSS---CCC-----TTCEECS---SCCEECCT--TCB----T-TTTCB---CCC
T ss_pred CCeEECCCCC----cCCCCC---CCCCCC---CCC-----CCCEEcC---CCEEeCCC--Ccc----C-CCccc---CcC
Confidence 3678888898 456776 345642 376 5678865 46788888 553 3 34763 345
Q ss_pred cCCCCCCCCCCCCCCccceeeeCCCceeeCCCCcccCCccCCCCCCCCCCCCCCCCCCCceeeCCCceeEecCCCCc
Q 006839 475 KINNGGCWHESKDGHTYSACLDSENGKCQCPPGFKGDGVKSCVDIDECKERKACQCSECSCKDTWGSYECTCSGDLL 551 (629)
Q Consensus 475 ~~~~~~C~~~~~~~~~~~~C~~~~~~~C~C~~Gf~g~~~~~C~dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~ 551 (629)
. ..|.+. +.|.+ .+.|.|++||.|.. |+ +++|. .+|. ++++|.+ .++|.|++||.
T Consensus 216 ~---~~C~~~-------G~C~~--~~~C~C~~G~~G~~---C~-~~~C~--~~C~-~~g~C~~---~~~C~C~~G~~ 270 (324)
T 2ygq_A 216 S---TTCFNG-------GTCFY--PGKCICPPGLEGEQ---CE-ISKCP--QPCR-NGGKCIG---KSKCKCSKGYQ 270 (324)
T ss_dssp S---SCCCSS-------CCBSC--SSCBCCCTTCCTTT---TC----------------------------------
T ss_pred C---CCCCCC-------CeeCC--CCeeeCCCCccCCC---CC-cCcCC--CcCC-CCCEECC---CCEEECCCCCc
Confidence 3 134333 45543 35666666666654 53 44554 1455 5556653 35666666664
No 58
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=98.27 E-value=3.1e-07 Score=95.02 Aligned_cols=115 Identities=27% Similarity=0.716 Sum_probs=34.5
Q ss_pred ceeeeccCCCccCCCCccccCCCcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCCCcc
Q 006839 395 AVLKAICSGFEETTEPAVCLSGETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKC 474 (629)
Q Consensus 395 ~~~c~cc~Gf~~~~~~~~C~~~d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C 474 (629)
.+.|.|.+|| .+..|+ .++|. ..|. +++.|.+. +.|.|++ ||. | ..|+ + ++|
T Consensus 196 ~~~C~C~~G~----~G~~C~---~~~C~---~~C~-----~~G~C~~~---~~C~C~~--G~~----G-~~C~-~--~~C 247 (324)
T 2ygq_A 196 PGFCICPPGF----YGVNCD---KANCS---TTCF-----NGGTCFYP---GKCICPP--GLE----G-EQCE-I--SKC 247 (324)
T ss_dssp SCCEECCTTC----BTTTTC---BCCCS---SCCC-----SSCCBSCS---SCBCCCT--TCC----T-TTTC-------
T ss_pred CCEEeCCCCc----cCCCcc---cCcCC---CCCC-----CCCeeCCC---CeeeCCC--Ccc----C-CCCC-c--CcC
Confidence 3579999999 466787 35574 3486 66899773 7899999 654 4 4586 3 567
Q ss_pred cCCCCCCCCCCCCCCccceeeeCCCceeeCCCCcccCCccCCCCCCCCCCCCCCCCCCCceeeCCCceeEecCCCCcccC
Q 006839 475 KINNGGCWHESKDGHTYSACLDSENGKCQCPPGFKGDGVKSCVDIDECKERKACQCSECSCKDTWGSYECTCSGDLLYIR 554 (629)
Q Consensus 475 ~~~~~~C~~~~~~~~~~~~C~~~~~~~C~C~~Gf~g~~~~~C~dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~ 554 (629)
. .+|.+. +.|.. .+.|.|++||.|+. |+ +++|.. +|. ++++|.+ +++|.|++||.
T Consensus 248 ~---~~C~~~-------g~C~~--~~~C~C~~G~~G~~---C~-~~~C~~--~C~-~~g~C~~---~~~C~C~~G~~--- 302 (324)
T 2ygq_A 248 P---QPCRNG-------GKCIG--KSKCKCSKGYQGDL---CS-KPVCEP--GCG-AHGTCHE---PNKCQCQEGWH--- 302 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred C---CcCCCC-------CEECC--CCEEECCCCCcCCC---Cc-CCCCCC--CCC-CCCEECC---CCEeECCCCCc---
Confidence 4 256554 67864 57999999999986 76 567863 688 7899987 58999999997
Q ss_pred CCCcccccc
Q 006839 555 DHDTCISKT 563 (629)
Q Consensus 555 ~g~~C~~~~ 563 (629)
|..|....
T Consensus 303 -G~~C~~~~ 310 (324)
T 2ygq_A 303 -GRHCNKRY 310 (324)
T ss_dssp ---------
T ss_pred -CCCCCCCC
Confidence 67787654
No 59
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.25 E-value=4.3e-07 Score=67.91 Aligned_cols=46 Identities=26% Similarity=0.610 Sum_probs=40.6
Q ss_pred cccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCCCccc
Q 006839 418 TNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCK 475 (629)
Q Consensus 418 ~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~ 475 (629)
.|||...+++|. +.|+|++|+|.|.|++ ||.+..|+ ++|.++ ++|.
T Consensus 1 ~dEC~~~~~~C~-------~~C~nt~Gsy~C~C~~--Gy~L~~d~-~~C~di--dec~ 46 (55)
T 2jkh_L 1 RKLCSLDNGDCD-------QFCHEEQNSVVCSCAR--GYTLADNG-KACIPT--GPYP 46 (55)
T ss_dssp -CCTTTGGGGCS-------SEEEEETTEEEEECCT--TEEECTTS-SCEEES--SSSC
T ss_pred CccccCCCCCcC-------cEeEcCCCCeEEeCCC--CCEECCCC-CeeccC--cccc
Confidence 378987778897 7999999999999999 99999999 999988 7774
No 60
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.22 E-value=5.6e-07 Score=70.47 Aligned_cols=47 Identities=30% Similarity=0.670 Sum_probs=43.2
Q ss_pred CcccccCCCCCCCCCcCCCccccccCCC-ceeeeeCCCCCeeEeCCCccccccCCCCccc
Q 006839 417 ETNECLDNNGGCWQDKTANVTACKDTFR-GRVCECPLVDGVQFKGDGYSHCEVSGPGKCK 475 (629)
Q Consensus 417 d~deC~~~~~~C~~~~~~~~~~C~n~~g-~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~ 475 (629)
|+|||...+++|. +.|.|++| +|.|.|++ ||.+..|+ ++|.++ ++|.
T Consensus 4 d~~eC~~~nggC~-------h~C~n~~g~s~~C~C~~--Gy~L~~D~-~tC~d~--dec~ 51 (69)
T 1kli_L 4 DQLICVNENGGCE-------QYCSDHTGTKRSCRCHE--GYSLLADG-VSCTPT--VEYP 51 (69)
T ss_dssp CCCCTTSGGGGCS-------SEEEEETTTEEEEECCT--TEEECTTS-SCEEEC--SSSC
T ss_pred ccccccCCCCCcC-------CEeEcCCCCCEEEeCCC--CCeECCCC-CcccCc--cccc
Confidence 8999998888998 89999999 89999999 99999999 999988 7774
No 61
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.14 E-value=1.2e-06 Score=68.66 Aligned_cols=46 Identities=22% Similarity=0.455 Sum_probs=41.1
Q ss_pred CCCCCCCCCC-CCCCCCCCceeeCCC-ceeEecCCCCcccCCCCccccccc
Q 006839 516 CVDIDECKER-KACQCSECSCKDTWG-SYECTCSGDLLYIRDHDTCISKTA 564 (629)
Q Consensus 516 C~dideC~~~-~~C~~~~~~C~nt~G-sy~C~C~~G~~~~~~g~~C~~~~~ 564 (629)
..|+|||... +.|. +.|+|+.| +|.|.|++||.+..|+++|.+...
T Consensus 2 ~~d~~eC~~~nggC~---h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~de 49 (69)
T 1kli_L 2 KDDQLICVNENGGCE---QYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE 49 (69)
T ss_dssp CSCCCCTTSGGGGCS---SEEEEETTTEEEEECCTTEEECTTSSCEEECSS
T ss_pred CcccccccCCCCCcC---CEeEcCCCCCEEEeCCCCCeECCCCCcccCccc
Confidence 4699999876 7898 89999999 899999999999999999998654
No 62
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.13 E-value=1.1e-06 Score=65.72 Aligned_cols=43 Identities=19% Similarity=0.471 Sum_probs=37.3
Q ss_pred CCCCCCC-CCCCCCCCceeeCCCceeEecCCCCcccCCCCccccccc
Q 006839 519 IDECKER-KACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCISKTA 564 (629)
Q Consensus 519 ideC~~~-~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~~~~~ 564 (629)
.|||... +.|. +.|+|++|+|+|.|++||.+..++.+|.+...
T Consensus 1 ~dEC~~~~~~C~---~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~dide 44 (55)
T 2jkh_L 1 RKLCSLDNGDCD---QFCHEEQNSVVCSCARGYTLADNGKACIPTGP 44 (55)
T ss_dssp -CCTTTGGGGCS---SEEEEETTEEEEECCTTEEECTTSSCEEESSS
T ss_pred CccccCCCCCcC---cEeEcCCCCeEEeCCCCCEECCCCCeeccCcc
Confidence 3789865 6788 79999999999999999999999999988654
No 63
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.11 E-value=2.6e-06 Score=96.13 Aligned_cols=94 Identities=28% Similarity=0.587 Sum_probs=68.9
Q ss_pred CccccccCCCcee---eeeCCCCCeeEeCCCccccccCC-------CCcccCCC--CCCCCCCCCCCccceeeeCCCcee
Q 006839 435 NVTACKDTFRGRV---CECPLVDGVQFKGDGYSHCEVSG-------PGKCKINN--GGCWHESKDGHTYSACLDSENGKC 502 (629)
Q Consensus 435 ~~~~C~n~~g~~~---C~C~~~~G~~~~~dg~~~C~~~~-------~~~C~~~~--~~C~~~~~~~~~~~~C~~~~~~~C 502 (629)
+++.|.+..|.|. |.|++ || .| ..|+-.. .++|...+ ..|... +.|.+ +.|
T Consensus 444 n~~~C~~g~G~~~~G~C~C~~--Gy--~G---~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~-------G~C~~---g~C 506 (690)
T 3fcs_B 444 NSHRCNNGNGTFECGVCRCGP--GW--LG---SQCECSEEDYRPSQQDECSPREGQPVCSQR-------GECLC---GQC 506 (690)
T ss_dssp TCTTTTTTSEEEETTEEEECT--TC--CS---SSSCCSCC------CCCCSSSSSSCGGGGS-------EEECS---SSE
T ss_pred CCCcccCCCCeEeCCceEeCC--Cc--cC---CceeeccCccCCccCCcCCCCCCCCCCCCC-------CEEEC---Cee
Confidence 6789998889998 99999 55 44 4475320 14465432 234433 77863 689
Q ss_pred eCC----CCcccCCccCCC-CCCCCCCC--CCCCCCCCceeeCCCceeEecCCCCccc
Q 006839 503 QCP----PGFKGDGVKSCV-DIDECKER--KACQCSECSCKDTWGSYECTCSGDLLYI 553 (629)
Q Consensus 503 ~C~----~Gf~g~~~~~C~-dideC~~~--~~C~~~~~~C~nt~Gsy~C~C~~G~~~~ 553 (629)
.|+ +||.|.. |+ ++++|... .+|. ++++|.+ +.|.|++||.+.
T Consensus 507 ~C~~~~~~Gy~G~~---Ce~~~~~C~~~~~~~C~-~~G~C~~----g~C~C~~Gy~G~ 556 (690)
T 3fcs_B 507 VCHSSDFGKITGKY---CECDDFSCVRYKGEMCS-GHGQCSC----GDCLCDSDWTGY 556 (690)
T ss_dssp EECCCSSCCCBSTT---SCBCSSCCCBSSSSBGG-GSEEEET----TEEEECTTEESS
T ss_pred EeecCCCCCeeCCC---cCcccCcCcCCCCCCCC-CCCEecC----CeeECcCCCcCC
Confidence 999 9999987 86 78899853 5798 7899987 799999999743
No 64
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=98.11 E-value=3.3e-06 Score=95.22 Aligned_cols=95 Identities=12% Similarity=0.172 Sum_probs=71.5
Q ss_pred eEeccCCCcCCCCCCCCCCCcc--ccCCCCCCcEEEEeCCCcCHHHHHHHHHHcCCcEEEEEECCCCCceecCCCCCccc
Q 006839 67 AVTYPKENRKGCREFGDFGISF--KAKPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDIS 144 (629)
Q Consensus 67 ~l~~~~~~~~gC~~~~~~~~~~--~~~~~~~~~i~Lv~RG~C~F~~K~~nAq~aGA~avII~n~~~~~~~~m~~~~~~~~ 144 (629)
.++++ .....|.+.......+ + ++|+|++||.|.|.+|..+++++||+++|++|+. ..+.
T Consensus 260 plv~~-~~~~~C~~~~l~~~~vdl~------GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~-~~~~---------- 321 (649)
T 3i6s_A 260 PVIYN-KTLSDCSSEELLSQVENPE------NTIVICDDNGDFSDQMRIITRARLKAAIFISEDP-GVFR---------- 321 (649)
T ss_dssp EEECC-TTTTTCCCHHHHTTSSSGG------GCEEEECCCSCHHHHHHHHHHHTCSEEEEECCCG-GGGG----------
T ss_pred eeEec-ccccccccccccccccccC------CcEEEEeCCCccHHHHHHHHHhcCceEEEEecCc-cccc----------
Confidence 34442 3567888743221122 4 9999999999999999999999999999999986 2111
Q ss_pred cccccCcccccEEEEeHHHHHHHHHHHcCCCeEEEEEEe
Q 006839 145 SAKYIENITIPSALIDKSFGETLKKALSGGEMVNVNLDW 183 (629)
Q Consensus 145 ~~~~~~~i~IP~~~I~~~~G~~l~~~l~~~~~v~~~~~~ 183 (629)
.....||+++|+.++|+.|++++.++...++++.+
T Consensus 322 ----~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~ 356 (649)
T 3i6s_A 322 ----SATFPNPGVVVNKKEGKQVINYVKNSVTPTATITF 356 (649)
T ss_dssp ----CCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEE
T ss_pred ----cccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEee
Confidence 11347999999999999999999987765566655
No 65
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.09 E-value=5.4e-06 Score=88.72 Aligned_cols=120 Identities=28% Similarity=0.614 Sum_probs=74.9
Q ss_pred eeeeccCCCccCCCCccccCCCcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccC-C----
Q 006839 396 VLKAICSGFEETTEPAVCLSGETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVS-G---- 470 (629)
Q Consensus 396 ~~c~cc~Gf~~~~~~~~C~~~d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~-~---- 470 (629)
+.|.|.+|| .+..|. . .|. +|. +++.|.+ +++.|.|++ || .| ..|+.. .
T Consensus 185 ~~c~C~~g~----~G~~C~--~--~C~----~C~-----~~G~C~~--~~g~C~C~~--G~--~G---~~Ce~~C~~g~~ 238 (423)
T 2gy5_A 185 IVRRCEAQK----WGPECN--H--LCT----ACM-----NNGVCHE--DTGECICPP--GF--MG---RTCEKACELHTF 238 (423)
T ss_dssp EECSSCTTE----ESTTSC--E--ECC----CCC-----TTCEECT--TTCCEECCT--TE--ES---TTSCEECCTTEE
T ss_pred cCCcCCCCC----CCCCCC--C--CCC----CCC-----CCCEEEC--CCCcEeCCC--Cc--cC---CCcccccCCCCC
Confidence 456788888 355666 2 342 476 6689987 567999999 65 44 447631 0
Q ss_pred ----CCcccCCCCCCCCCCCCCCccceeeeCC-CceeeCCCCcccCCccCCCC-------CCCCCCCCCCCCCCCceeeC
Q 006839 471 ----PGKCKINNGGCWHESKDGHTYSACLDSE-NGKCQCPPGFKGDGVKSCVD-------IDECKERKACQCSECSCKDT 538 (629)
Q Consensus 471 ----~~~C~~~~~~C~~~~~~~~~~~~C~~~~-~~~C~C~~Gf~g~~~~~C~d-------ideC~~~~~C~~~~~~C~nt 538 (629)
.++|. .++.|.+. +.|. . ++.|.|++||.|.. |+. -+.|...-+|. ++++|.+.
T Consensus 239 g~~C~~~C~-~~~~C~~~-------g~C~--~~~~~C~C~~G~~G~~---C~~~C~~G~~G~~C~~~C~C~-ngg~C~~~ 304 (423)
T 2gy5_A 239 GRTCKERCS-GQEGCKSY-------VFCL--PDPYGCSCATGWKGLQ---CNEACHPGFYGPDCKLRCSCN-NGEMCDRF 304 (423)
T ss_dssp STTSCEECC-STTTTTTC-------CEEE--TTTTEEECCBTCBSGG---GCBCCCTTBCSBTTCCBCCCT-TCCEEETT
T ss_pred CCCcCccCC-CCCCCCCC-------CEEC--CCCCeEEeCCCccccc---ccCccCCCCcCCcccccccCC-CCCEecCC
Confidence 01232 12334333 6673 4 89999999999876 543 12233211466 67899876
Q ss_pred CCceeEecCCCCcccCCCCccccc
Q 006839 539 WGSYECTCSGDLLYIRDHDTCISK 562 (629)
Q Consensus 539 ~Gsy~C~C~~G~~~~~~g~~C~~~ 562 (629)
.+ |.|++||. |..|...
T Consensus 305 ~~---C~C~~G~~----G~~Ce~~ 321 (423)
T 2gy5_A 305 QG---CLCSPGWQ----GLQCERE 321 (423)
T ss_dssp TE---EECCTTCB----STTSCBC
T ss_pred Cc---eECCCCCc----CCCCccC
Confidence 54 99999997 4556543
No 66
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.04 E-value=3.9e-06 Score=57.85 Aligned_cols=38 Identities=39% Similarity=0.769 Sum_probs=33.0
Q ss_pred CCCCCCCCCCCCCCCCCceeeCCCceeEecCCCCcccCCCCccc
Q 006839 517 VDIDECKERKACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCI 560 (629)
Q Consensus 517 ~dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~ 560 (629)
.|+|+|..+ +|. ++++|+++.++|+|.|++||. |..|.
T Consensus 1 ~d~d~C~~~-pC~-ngg~C~~~~~~~~C~C~~G~~----G~~Ce 38 (39)
T 1edm_B 1 VDGDQCESN-PCL-NGGSCKDDINSYECWCPFGFE----GKNCE 38 (39)
T ss_dssp CCCCTTTTC-CCC-TTCEEEEETTEEEEECCTTCC----STTSC
T ss_pred CccccCCCC-CCC-CCCEeEcCCCceEeECCCCCc----CCccC
Confidence 378999887 999 899999999999999999997 55554
No 67
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.97 E-value=3.8e-06 Score=61.63 Aligned_cols=42 Identities=26% Similarity=0.635 Sum_probs=36.7
Q ss_pred ccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCCCcc
Q 006839 421 CLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKC 474 (629)
Q Consensus 421 C~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C 474 (629)
|...+++|. +.|+|++|+|.|.|++ ||.+..|+ ++|.++ ++|
T Consensus 1 C~~~ng~C~-------~~C~n~~gs~~C~C~~--Gy~L~~d~-~tC~di--de~ 42 (51)
T 1kig_L 1 CSLDNGGCD-------QFCREERSEVRCSCAH--GYVLGDDS-KSCVST--ERF 42 (51)
T ss_dssp CCTTTTSSS-------SCCCEETTEECCCCCT--TEEECTTS-SCEEEC--SSS
T ss_pred CCCCCCCcC-------CEeEcCCCCeEEeCCC--CcEECCCC-CccccC--Ccc
Confidence 455667797 7899999999999999 99999999 999988 666
No 68
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.91 E-value=6.2e-06 Score=64.95 Aligned_cols=28 Identities=36% Similarity=0.915 Sum_probs=24.9
Q ss_pred CCCCCCCCC-CCCCCCCCceeeCCCceeEe
Q 006839 517 VDIDECKER-KACQCSECSCKDTWGSYECT 545 (629)
Q Consensus 517 ~dideC~~~-~~C~~~~~~C~nt~Gsy~C~ 545 (629)
+|||||... ++|. .+++|+|+.|+|+|.
T Consensus 1 ~DidEC~~~~~~C~-~~~~C~Nt~Gsy~C~ 29 (71)
T 2kl7_A 1 SDVNECLTIPEACK-GEMKCINHYGGYLCL 29 (71)
T ss_dssp CCSCCTTCCCCSCT-TEEEEEETTCCEEEE
T ss_pred CccccccCCCCCCC-CCCEeECCCCCeEec
Confidence 489999876 7898 778999999999999
No 69
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=97.88 E-value=9.4e-06 Score=91.33 Aligned_cols=120 Identities=25% Similarity=0.553 Sum_probs=78.6
Q ss_pred eeeeccCCCccCCCCccccCCCcc---------cccCCC--CCCCCCcCCCccccccCCCceeeeeC------CCCCeeE
Q 006839 396 VLKAICSGFEETTEPAVCLSGETN---------ECLDNN--GGCWQDKTANVTACKDTFRGRVCECP------LVDGVQF 458 (629)
Q Consensus 396 ~~c~cc~Gf~~~~~~~~C~~~d~d---------eC~~~~--~~C~~~~~~~~~~C~n~~g~~~C~C~------~~~G~~~ 458 (629)
..|.|.+|| .|..|+- +++ +|...+ ..|. +++.|.+ | .|.|+ + | |
T Consensus 446 g~C~C~~Gy----~G~~Cec-~~~~~~~~~~~~~C~~~~~~~~Cs-----~~G~C~~--G--~C~C~~~~~~~~--G--~ 507 (687)
T 3k6s_B 446 GICRCDTGY----IGKNCEC-QTQGRSSQELEGSCRKDNNSIICS-----GLGDCVC--G--QCLCHTSDVPGK--L--I 507 (687)
T ss_dssp SSEEECSSE----ESTTSCE-ESSSCCCSGGGSTTSSSTTSCGGG-----SSEEEET--T--EEEECCCCSTTC--C--E
T ss_pred CEeEcCCCC----cCCcccc-cCCcCCccccCCCCCCCCCCCcCC-----CCCEEeC--C--EEEcCCCCCCCC--C--c
Confidence 357788998 4666762 122 465432 2365 6789984 2 89999 7 4 4
Q ss_pred eCCCccccccCCCCcccCCC-CCCCCCCCCCCccceeeeCCCceeeCCCCcccCCccCCC---CCCCCCCC--CCCCCCC
Q 006839 459 KGDGYSHCEVSGPGKCKINN-GGCWHESKDGHTYSACLDSENGKCQCPPGFKGDGVKSCV---DIDECKER--KACQCSE 532 (629)
Q Consensus 459 ~~dg~~~C~~~~~~~C~~~~-~~C~~~~~~~~~~~~C~~~~~~~C~C~~Gf~g~~~~~C~---dideC~~~--~~C~~~~ 532 (629)
.| ..|+- +...|...+ ..|.. +.++.|.. ..|.|++||.|.. |+ ++++|... .+|. ++
T Consensus 508 ~G---~~Ce~-~~~~C~~~~~~~C~~-----~~~G~C~~---g~C~C~~G~~G~~---Cec~~~~~~C~~~~g~~Cs-~~ 571 (687)
T 3k6s_B 508 YG---QYCEC-DTINCERYNGQVCGG-----PGRGLCFC---GKCRCHPGFEGSA---CQCERTTEGCLNPRRVECS-GR 571 (687)
T ss_dssp ES---TTSCE-ESSCSCEETTEETSH-----HHHEEEET---TEEEECTTCCSTT---SCSCCSSCTTBCTTCSBTS-SS
T ss_pred cc---ccccc-ccccccCCCCcCcCC-----CCCCeEEC---CEEEcCCCCcCCC---CccCCCCCCCCCCCCCCCC-CC
Confidence 54 44862 125676431 23543 00377864 4899999999987 65 47889764 5788 78
Q ss_pred CceeeCCCceeEecCCCCccc
Q 006839 533 CSCKDTWGSYECTCSGDLLYI 553 (629)
Q Consensus 533 ~~C~nt~Gsy~C~C~~G~~~~ 553 (629)
++|.+ .+|.|.+||.+.
T Consensus 572 G~C~~----g~C~C~~Gy~G~ 588 (687)
T 3k6s_B 572 GRCRC----NVCECHSGYQLP 588 (687)
T ss_dssp CCBCS----SCBCCSTTCCTT
T ss_pred CcCCC----CEEECCCCCcCC
Confidence 89987 579999999743
No 70
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.82 E-value=1e-05 Score=59.74 Aligned_cols=42 Identities=24% Similarity=0.687 Sum_probs=35.8
Q ss_pred CcccccCC--------CCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCcccccc
Q 006839 417 ETNECLDN--------NGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEV 468 (629)
Q Consensus 417 d~deC~~~--------~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~ 468 (629)
|+|||... +++|. +.|+|++|+|.|.|++ ||.+..++ ++|.+
T Consensus 3 DidEC~~~~~~~~~~~~~~C~-------~~C~n~~Gsy~C~C~~--Gy~~~~d~-~~C~~ 52 (53)
T 1apq_A 3 DLDECASRSKSGEEDPQPQCQ-------HLCHNYVGGYFCSCRP--GYELQEDR-HSCQA 52 (53)
T ss_dssp SCCTTTCSTTTCCCSSSCTTS-------SEEEEETTEEEEECST--TCEECTTS-SCEEC
T ss_pred ccccccCcccccccccCCCCC-------CEeECCCCCeEEECCC--CCeECCCC-CccCC
Confidence 78999864 35687 7999999999999999 99998888 77863
No 71
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=97.80 E-value=9.6e-06 Score=59.94 Aligned_cols=43 Identities=33% Similarity=0.755 Sum_probs=37.6
Q ss_pred ccCCCCCCCCCcCCCccccccCCC-ceeeeeCCCCCeeEeCCCccccccCCCCccc
Q 006839 421 CLDNNGGCWQDKTANVTACKDTFR-GRVCECPLVDGVQFKGDGYSHCEVSGPGKCK 475 (629)
Q Consensus 421 C~~~~~~C~~~~~~~~~~C~n~~g-~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~ 475 (629)
|...+++|. +.|+|+.| +|.|.|++ ||.+..|+ ++|.++ ++|.
T Consensus 2 C~~~nggC~-------~~C~n~~ggs~~C~C~~--Gy~L~~Dg-~tC~d~--dec~ 45 (53)
T 2bz6_L 2 CVNENGGCE-------QYCSDHTGTKRSCRCHE--GYSLLADG-VSCTPT--VEYP 45 (53)
T ss_dssp TTSGGGGCS-------SEEEEETTTEEEEECCT--TEEECTTS-SCEEEC--SSSC
T ss_pred CcCCCCCcC-------CEeEcCCCCCEEeeCCC--CCEECCCC-CcccCC--cccc
Confidence 556677798 78999999 79999999 99999999 999988 7773
No 72
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=97.73 E-value=8.1e-05 Score=87.55 Aligned_cols=62 Identities=34% Similarity=0.495 Sum_probs=52.1
Q ss_pred CcEEEEeCCCcCHHHHHHHHHHcCCcEEEEEECCCCCc-eecCCCCCccccccccCcccccEEEEeHHHHHHHHH
Q 006839 96 PNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEAL-ITMDTPEEDISSAKYIENITIPSALIDKSFGETLKK 169 (629)
Q Consensus 96 ~~i~Lv~RG~C~F~~K~~nAq~aGA~avII~n~~~~~~-~~m~~~~~~~~~~~~~~~i~IP~~~I~~~~G~~l~~ 169 (629)
++|||++||.|+|.+|+.+|+++||.++||+|+..... +.+ .....||+++|++.+|+.|+.
T Consensus 281 Gkivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~------------~~~~~iP~~~i~~~~g~~l~~ 343 (926)
T 1xf1_A 281 GKIALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIEL------------PNVDQMPAAFISRKDGLLLKD 343 (926)
T ss_dssp TSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEEC------------CCSTTCCEEEECHHHHHHHHH
T ss_pred CeEEEEECCCCCHHHHHHHHHhCCCcEEEEEecCCCCccccc------------CccccccEEEEeHHHHHHHHh
Confidence 89999999999999999999999999999999865432 211 113479999999999999885
No 73
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.71 E-value=9.8e-06 Score=61.52 Aligned_cols=34 Identities=26% Similarity=0.633 Sum_probs=31.7
Q ss_pred CCCCCCCCCCCCCCCCC--CceeeCCCceeEecCCCCc
Q 006839 516 CVDIDECKERKACQCSE--CSCKDTWGSYECTCSGDLL 551 (629)
Q Consensus 516 C~dideC~~~~~C~~~~--~~C~nt~Gsy~C~C~~G~~ 551 (629)
|+++|+|..+ +|. ++ ++|+|+.++|.|.|++||.
T Consensus 8 ~~~~d~C~sn-PC~-nga~gtC~~~~g~y~C~C~~Gy~ 43 (61)
T 2k2s_B 8 SETPAACSSN-PCG-PEAAGTCKETNSGYICRCNQGYR 43 (61)
T ss_dssp TTSCCHHHHC-SSC-SSSCCEEEECSSEEEEECCTTEE
T ss_pred cCCCCcCcCC-CCc-CCCccccccCCCceEeECCCCCc
Confidence 7899999887 999 87 7999999999999999997
No 74
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.70 E-value=1.3e-05 Score=58.72 Aligned_cols=36 Identities=19% Similarity=0.609 Sum_probs=32.5
Q ss_pred CCCCCCCCceeeCCCceeEecCCCCcccCCCCccccccc
Q 006839 526 KACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCISKTA 564 (629)
Q Consensus 526 ~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~~~~~ 564 (629)
+.|. +.|+|++|+|+|.|++||.+..|+++|.+...
T Consensus 6 g~C~---~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide 41 (51)
T 1kig_L 6 GGCD---QFCREERSEVRCSCAHGYVLGDDSKSCVSTER 41 (51)
T ss_dssp TSSS---SCCCEETTEECCCCCTTEEECTTSSCEEECSS
T ss_pred CCcC---CEeEcCCCCeEEeCCCCcEECCCCCccccCCc
Confidence 5787 78999999999999999999999999998654
No 75
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=97.69 E-value=2.6e-05 Score=58.91 Aligned_cols=39 Identities=31% Similarity=0.687 Sum_probs=34.5
Q ss_pred ccCCCCCCCCCcCCCccccccCC-CceeeeeCCCCCeeEeCCCccccccC
Q 006839 421 CLDNNGGCWQDKTANVTACKDTF-RGRVCECPLVDGVQFKGDGYSHCEVS 469 (629)
Q Consensus 421 C~~~~~~C~~~~~~~~~~C~n~~-g~~~C~C~~~~G~~~~~dg~~~C~~~ 469 (629)
|...+++|. +.|+|++ |+|.|.|++ ||.+..|+ ++|.++
T Consensus 2 C~~~nggC~-------~~C~n~~~gs~~C~C~~--Gy~L~~D~-~tC~d~ 41 (59)
T 2wph_E 2 CNIKNGRCE-------QFCKNSADNKVVCSCTE--GYRLAENQ-KSCEPA 41 (59)
T ss_dssp TTTGGGGCS-------SEEEECSTTCEEEECCT--TEEECTTS-SCEEES
T ss_pred CcCCCCCcC-------CEeEeCCCCCEEeeCCC--CcEECCCC-CcccCC
Confidence 555677898 7899999 699999999 99999999 999987
No 76
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=97.66 E-value=7.6e-06 Score=81.43 Aligned_cols=43 Identities=16% Similarity=0.615 Sum_probs=34.3
Q ss_pred CCCCCCCCC-CCCCCCCCceeeCCCceeEecCCCCcccCCCCccccc
Q 006839 517 VDIDECKER-KACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCISK 562 (629)
Q Consensus 517 ~dideC~~~-~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~~~ 562 (629)
+|+|||..+ +.|+ .++.|+|+.|+|.|.|++||. ++|..|.+.
T Consensus 3 ~DiDEC~~~~~~C~-~~a~C~Nt~Gsy~C~C~~Gy~--GnG~~C~d~ 46 (285)
T 1gl4_A 3 LAQQTCANNRHQCS-VHAECRDYATGFCCRCVANYT--GNGRQCVAE 46 (285)
T ss_dssp ----CHHHHGGGSC-TTEEEEECSSCEEEEECTTEE--ECSSSEEET
T ss_pred ccchhccCCCCCCC-CCCEeEcCCCCeEEEcCCCCC--CCCCcCCCC
Confidence 589999866 7899 789999999999999999997 677889764
No 77
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=97.64 E-value=6.7e-05 Score=80.97 Aligned_cols=74 Identities=24% Similarity=0.260 Sum_probs=57.6
Q ss_pred CCcEEEEeCCCc-----CHHHHHHHHHHcCCcEEEEEECCCCCc----eecCCCCCccccccccCcccccEEEEeHHHHH
Q 006839 95 LPNFVLVDRGDC-----FFALKVWNAQKAGASAVLVADDIEEAL----ITMDTPEEDISSAKYIENITIPSALIDKSFGE 165 (629)
Q Consensus 95 ~~~i~Lv~RG~C-----~F~~K~~nAq~aGA~avII~n~~~~~~----~~m~~~~~~~~~~~~~~~i~IP~~~I~~~~G~ 165 (629)
.++|+|++||.| +|.+|+.+|+++||+++|||||.+.+- +.+. ......||+++|++++|+
T Consensus 273 ~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~----------~~~~~~~p~~~v~~~~g~ 342 (441)
T 1y9z_A 273 ANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVD----------ANSDITVPSVSVDRATGL 342 (441)
T ss_dssp TTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEEC----------TTCCCCSCEEEECHHHHH
T ss_pred cccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccc----------cccCccccEEEEeHHHHH
Confidence 399999999987 899999999999999999999864221 1111 122458999999999999
Q ss_pred HHHHHHcCCCeEEEE
Q 006839 166 TLKKALSGGEMVNVN 180 (629)
Q Consensus 166 ~l~~~l~~~~~v~~~ 180 (629)
.|++++.. .+++.
T Consensus 343 ~l~~~~~~--~~t~~ 355 (441)
T 1y9z_A 343 ALKAKLGQ--STTVS 355 (441)
T ss_dssp HHHTTTTS--EEEEE
T ss_pred HHHHHhcC--Ccccc
Confidence 99998854 44443
No 78
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.64 E-value=2.7e-05 Score=57.78 Aligned_cols=41 Identities=22% Similarity=0.496 Sum_probs=33.8
Q ss_pred CCCCCCCCCCCCCCCCCce-----eeCCCceeEecCCCCcccCCCCcccccc
Q 006839 517 VDIDECKERKACQCSECSC-----KDTWGSYECTCSGDLLYIRDHDTCISKT 563 (629)
Q Consensus 517 ~dideC~~~~~C~~~~~~C-----~nt~Gsy~C~C~~G~~~~~~g~~C~~~~ 563 (629)
.++|||.++ +|. ++++| ++..++|.|.|++||. |..|+...
T Consensus 6 ~~~~eC~s~-pC~-NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE~~v 51 (55)
T 3u7u_G 6 VKCAEKEKT-FCV-NGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQNYV 51 (55)
T ss_dssp EECCSTTTT-TSC-TTCEEEEECCC--CCCEEEEECTTEE----STTSCEEC
T ss_pred ccCCCCcCC-CCC-CCCCcCCCCccCCCCCEeEeCCCCCc----CCCcCccC
Confidence 489999988 999 99999 4667899999999997 77887654
No 79
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=97.58 E-value=5.2e-05 Score=70.62 Aligned_cols=82 Identities=22% Similarity=0.590 Sum_probs=60.7
Q ss_pred ceeeeccCCCccCCCCccccCCCcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccc-cCCCCc
Q 006839 395 AVLKAICSGFEETTEPAVCLSGETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCE-VSGPGK 473 (629)
Q Consensus 395 ~~~c~cc~Gf~~~~~~~~C~~~d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~-~~~~~~ 473 (629)
.+.|.|.+||. +..|. +|...+ .|. + +.|+ ++|.|.|++ ||. | ..|+ ++ ++
T Consensus 82 ~~~C~C~~G~~----G~~C~-----~C~~~~-~C~-----~-g~C~---~~~~C~C~~--G~~----G-~~C~~~~--~~ 133 (169)
T 2vj2_A 82 PGDCRCQYGWQ----GLYCD-----KCIPHP-GCV-----H-GICN---EPWQCLCET--NWG----G-QLCDKDL--NY 133 (169)
T ss_dssp TTCCEECTTEE----SSSSC-----EECCCT-TCS-----S-EECS---STTCCEECT--TEE----T-TTTCEES--CH
T ss_pred CCeeECCCCCC----CCCcc-----cCCCCC-CCC-----C-CCcC---CCCEEeCCC--CCC----C-CcccCCC--CC
Confidence 46788999994 66665 465432 375 3 4887 679999999 664 4 5597 55 88
Q ss_pred ccCCCCCCCCCCCCCCccceeeeC-C-CceeeCCCCcccCC
Q 006839 474 CKINNGGCWHESKDGHTYSACLDS-E-NGKCQCPPGFKGDG 512 (629)
Q Consensus 474 C~~~~~~C~~~~~~~~~~~~C~~~-~-~~~C~C~~Gf~g~~ 512 (629)
|.. ..+|.+. ++|+++ + +|.|.|++||.|..
T Consensus 134 C~~-~~~C~~~-------g~C~~~~~~~~~C~C~~G~~G~~ 166 (169)
T 2vj2_A 134 CGT-HQPCLNG-------GTCSNTGPDKYQCSCPEGYSGPN 166 (169)
T ss_dssp HHH-TCCCCTT-------CEEEECSTTCEEEECCTTCCSTT
T ss_pred CCC-CCCCCCC-------CEEcCCCCCCcEeECCCCCcCcC
Confidence 975 3478766 889996 5 89999999999876
No 80
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.54 E-value=6.6e-05 Score=55.40 Aligned_cols=41 Identities=22% Similarity=0.565 Sum_probs=34.6
Q ss_pred CCCCCCCC--CCCCCCCCcee--eCCCceeEecCCCCcccCCCCcccccc
Q 006839 518 DIDECKER--KACQCSECSCK--DTWGSYECTCSGDLLYIRDHDTCISKT 563 (629)
Q Consensus 518 dideC~~~--~~C~~~~~~C~--nt~Gsy~C~C~~G~~~~~~g~~C~~~~ 563 (629)
|||+|..+ ++|. ++++|+ +..++|.|.|++||+ |..|....
T Consensus 2 ~i~~C~~~~~~pC~-ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~~~ 46 (53)
T 1egf_A 2 SYPGCPSSYDGYCL-NGGVCMHIESLDSYTCNCVIGYS----GDRCQTRD 46 (53)
T ss_dssp EECCCCTTSSCSSC-SSCEEEEESSSSCEEEECCTTCC----SSSSCCCS
T ss_pred CcccCCCCCCCcCC-CCcEEEeeCCCCCEEEECCCCCc----CCcCCccC
Confidence 68999875 6899 889999 889999999999997 66776543
No 81
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=97.47 E-value=5.5e-05 Score=55.81 Aligned_cols=40 Identities=23% Similarity=0.603 Sum_probs=34.0
Q ss_pred CCCC-CCCCCCCCceeeCCC-ceeEecCCCCcccCCCCccccccc
Q 006839 522 CKER-KACQCSECSCKDTWG-SYECTCSGDLLYIRDHDTCISKTA 564 (629)
Q Consensus 522 C~~~-~~C~~~~~~C~nt~G-sy~C~C~~G~~~~~~g~~C~~~~~ 564 (629)
|..+ +.|+ +.|+|+.| +|+|.|++||.+..|+++|.+...
T Consensus 2 C~~~nggC~---~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~de 43 (53)
T 2bz6_L 2 CVNENGGCE---QYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE 43 (53)
T ss_dssp TTSGGGGCS---SEEEEETTTEEEEECCTTEEECTTSSCEEECSS
T ss_pred CcCCCCCcC---CEeEcCCCCCEEeeCCCCCEECCCCCcccCCcc
Confidence 4433 5687 89999999 899999999999999999998654
No 82
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=97.39 E-value=9.3e-05 Score=55.87 Aligned_cols=36 Identities=17% Similarity=0.517 Sum_probs=32.0
Q ss_pred CCCCCCCCceeeCC-CceeEecCCCCcccCCCCccccccc
Q 006839 526 KACQCSECSCKDTW-GSYECTCSGDLLYIRDHDTCISKTA 564 (629)
Q Consensus 526 ~~C~~~~~~C~nt~-Gsy~C~C~~G~~~~~~g~~C~~~~~ 564 (629)
+.|. +.|+|++ |+|.|.|++||.+..|+++|.+...
T Consensus 7 ggC~---~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~ 43 (59)
T 2wph_E 7 GRCE---QFCKNSADNKVVCSCTEGYRLAENQKSCEPAVP 43 (59)
T ss_dssp GGCS---SEEEECSTTCEEEECCTTEEECTTSSCEEESSS
T ss_pred CCcC---CEeEeCCCCCEEeeCCCCcEECCCCCcccCCCC
Confidence 5787 8999999 6999999999999999999988643
No 83
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.38 E-value=9e-05 Score=54.93 Aligned_cols=43 Identities=23% Similarity=0.452 Sum_probs=31.2
Q ss_pred ccccCCCcccccCCCCCCCCCcCCCcccc-----ccCCCceeeeeCCCCCeeEeCCCcccccc
Q 006839 411 AVCLSGETNECLDNNGGCWQDKTANVTAC-----KDTFRGRVCECPLVDGVQFKGDGYSHCEV 468 (629)
Q Consensus 411 ~~C~~~d~deC~~~~~~C~~~~~~~~~~C-----~n~~g~~~C~C~~~~G~~~~~dg~~~C~~ 468 (629)
..|+. ++|||..+| |. |+++| ++..++|.|.|++ || . | +.|+.
T Consensus 2 ~~c~~-~~~eC~s~p--C~-----NgGtC~~~~~~d~~~~y~C~C~~--g~--~--G-~~CE~ 49 (55)
T 3u7u_G 2 TSHLV-KCAEKEKTF--CV-----NGGECFMVKDLSNPSRYLCKCPN--EF--T--G-DRCQN 49 (55)
T ss_dssp -CCEE-ECCSTTTTT--SC-----TTCEEEEECCC--CCCEEEEECT--TE--E--S-TTSCE
T ss_pred CCCcc-cCCCCcCCC--CC-----CCCCcCCCCccCCCCCEeEeCCC--CC--c--C-CCcCc
Confidence 34665 899998766 98 88999 5678899999999 55 4 4 45863
No 84
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=97.35 E-value=5.6e-05 Score=70.41 Aligned_cols=52 Identities=29% Similarity=0.719 Sum_probs=43.5
Q ss_pred CCcccCCccCCCCCCCCCCC-CC---CCCCCCceeeCCCceeEecCCCCcccCCCCccccc
Q 006839 506 PGFKGDGVKSCVDIDECKER-KA---CQCSECSCKDTWGSYECTCSGDLLYIRDHDTCISK 562 (629)
Q Consensus 506 ~Gf~g~~~~~C~dideC~~~-~~---C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~~~ 562 (629)
.||.+.. .|.|+|||... +. |+ +.|.|+.|+|.|.|++||.+..++++|...
T Consensus 113 ~Gf~~~~--~~~di~eC~~~~~~~~~C~---~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~ 168 (170)
T 1szb_A 113 TGFEAFY--AAEDIDECQVAPGEAPTCD---HHCHNHLGGFYCSCRAGYVLHRNKRTCSEQ 168 (170)
T ss_dssp CEEEEEE--EEEECCTTCCCTTSCCSSS---SEEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred cCceeee--eccccCcccCCCCCCCccC---CccccCCCCEEEeCCCCcEECCCCCccccc
Confidence 6777643 36799999876 33 88 689999999999999999999999999864
No 85
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=97.35 E-value=0.00018 Score=59.57 Aligned_cols=71 Identities=28% Similarity=0.548 Sum_probs=57.7
Q ss_pred cceeeeC-C-CceeeCCCCcccCCccCCCCCCC-CCCC-CCCCCCCCceeeCC-CceeEecCCCCcc-cCCCCcccccc
Q 006839 491 YSACLDS-E-NGKCQCPPGFKGDGVKSCVDIDE-CKER-KACQCSECSCKDTW-GSYECTCSGDLLY-IRDHDTCISKT 563 (629)
Q Consensus 491 ~~~C~~~-~-~~~C~C~~Gf~g~~~~~C~dide-C~~~-~~C~~~~~~C~nt~-Gsy~C~C~~G~~~-~~~g~~C~~~~ 563 (629)
+|.|... + ...|+|..||.+++.. |..++. |..+ +.|+ .++.|..+. ..-.|.|.+||.. ..+|..|....
T Consensus 21 NA~C~r~~~G~e~CrCl~gY~~dg~~-Cv~~Np~C~~nNGGCd-~nAeC~~~~~~ki~C~C~~~~~~~~~~GvfC~~ss 97 (105)
T 1n1i_A 21 NAACYRYLDGTEEWRCLLGFKEVGGK-CVPASITCEENNGGCA-PEAECTMDDKKEVECKCTKEGSEPLFEGVFCSSSS 97 (105)
T ss_dssp TEEEEECTTSCEEEEECTTEEECSSS-EEECCCCTTSGGGGSC-TTSEEEECTTSCEEEECCSTTCCEEGGGTEECCCC
T ss_pred CCCeEECCCCCEeEEEECCeeccCCE-EEECCcchhhcCCCcC-CCcEeEECCCCEEEeECCCCCCccccceEEECCCC
Confidence 4889874 4 7899999999998755 987788 8766 7899 999999885 8899999999753 25777787654
No 86
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.30 E-value=0.00017 Score=56.61 Aligned_cols=40 Identities=25% Similarity=0.449 Sum_probs=30.5
Q ss_pred CcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCC
Q 006839 417 ETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDG 462 (629)
Q Consensus 417 d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg 462 (629)
|+|||...++.|. +++.|+|++|+|+|.|... ||....++
T Consensus 2 DidEC~~~~~~C~-----~~~~C~Nt~Gsy~C~~~~~-g~~~~~~~ 41 (71)
T 2kl7_A 2 DVNECLTIPEACK-----GEMKCINHYGGYLCLPRSA-AVINDLHG 41 (71)
T ss_dssp CSCCTTCCCCSCT-----TEEEEEETTCCEEEEETTS-CCCSCCSC
T ss_pred ccccccCCCCCCC-----CCCEeECCCCCeEecccCC-cccccccC
Confidence 7999988777897 5589999999999985431 55554444
No 87
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=97.26 E-value=2.9e-05 Score=77.33 Aligned_cols=43 Identities=26% Similarity=0.647 Sum_probs=34.7
Q ss_pred CcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccC
Q 006839 417 ETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVS 469 (629)
Q Consensus 417 d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~ 469 (629)
|+|||..+.+.|. .++.|+|+.|+|.|.|++ || .++| ..|.++
T Consensus 4 DiDEC~~~~~~C~-----~~a~C~Nt~Gsy~C~C~~--Gy--~GnG-~~C~d~ 46 (285)
T 1gl4_A 4 AQQTCANNRHQCS-----VHAECRDYATGFCCRCVA--NY--TGNG-RQCVAE 46 (285)
T ss_dssp ---CHHHHGGGSC-----TTEEEEECSSCEEEEECT--TE--EECS-SSEEET
T ss_pred cchhccCCCCCCC-----CCCEeEcCCCCeEEEcCC--CC--CCCC-CcCCCC
Confidence 8999998778898 459999999999999999 55 5888 789887
No 88
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=97.23 E-value=0.00037 Score=57.77 Aligned_cols=61 Identities=30% Similarity=0.572 Sum_probs=51.0
Q ss_pred Ccccccc-CCCceeeeeCCCCCeeEeCCCccccccCCCCc-ccCCCCCCCCCCCCCCccceeeeCC--CceeeCCCCcc
Q 006839 435 NVTACKD-TFRGRVCECPLVDGVQFKGDGYSHCEVSGPGK-CKINNGGCWHESKDGHTYSACLDSE--NGKCQCPPGFK 509 (629)
Q Consensus 435 ~~~~C~n-~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~-C~~~~~~C~~~~~~~~~~~~C~~~~--~~~C~C~~Gf~ 509 (629)
.++.|.. .+|..+|.|.. || .+|| ..|..+ ++ |..++++|... |.|+.+. ...|.|..||.
T Consensus 20 ~NA~C~r~~~G~e~CrCl~--gY--~~dg-~~Cv~~--Np~C~~nNGGCd~n-------AeC~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 20 ENAACYRYLDGTEEWRCLL--GF--KEVG-GKCVPA--SITCEENNGGCAPE-------AECTMDDKKEVECKCTKEGS 84 (105)
T ss_dssp TTEEEEECTTSCEEEEECT--TE--EECS-SSEEEC--CCCTTSGGGGSCTT-------SEEEECTTSCEEEECCSTTC
T ss_pred CCCCeEECCCCCEeEEEEC--Ce--eccC-CEEEEC--CcchhhcCCCcCCC-------cEeEECCCCEEEeECCCCCC
Confidence 5599988 58999999999 55 4567 779987 77 88889999887 9999885 88999999975
No 89
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.23 E-value=0.00015 Score=49.65 Aligned_cols=32 Identities=34% Similarity=0.864 Sum_probs=27.0
Q ss_pred CcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCee
Q 006839 417 ETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQ 457 (629)
Q Consensus 417 d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~ 457 (629)
|+|+|..++ |. +++.|+++.++|.|.|++ ||.
T Consensus 2 d~d~C~~~p--C~-----ngg~C~~~~~~~~C~C~~--G~~ 33 (39)
T 1edm_B 2 DGDQCESNP--CL-----NGGSCKDDINSYECWCPF--GFE 33 (39)
T ss_dssp CCCTTTTCC--CC-----TTCEEEEETTEEEEECCT--TCC
T ss_pred ccccCCCCC--CC-----CCCEeEcCCCceEeECCC--CCc
Confidence 688997654 87 679999999999999999 663
No 90
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=97.17 E-value=0.00021 Score=58.97 Aligned_cols=68 Identities=26% Similarity=0.657 Sum_probs=53.1
Q ss_pred cceeeeCC--CceeeCCCCcccCCccCCCCC--CCCCCC-CCCCCCCCceeeCC-----CceeEecCCCCcc-cCCCCcc
Q 006839 491 YSACLDSE--NGKCQCPPGFKGDGVKSCVDI--DECKER-KACQCSECSCKDTW-----GSYECTCSGDLLY-IRDHDTC 559 (629)
Q Consensus 491 ~~~C~~~~--~~~C~C~~Gf~g~~~~~C~di--deC~~~-~~C~~~~~~C~nt~-----Gsy~C~C~~G~~~-~~~g~~C 559 (629)
+|.|.+.. ...|+|.+||.+++.. |..+ +.|..+ +.|+ +++.|..+. +...|.|.+||.. ..+|..|
T Consensus 15 NA~C~r~~~g~e~C~C~~gy~gdg~~-Cv~~~~~sC~~nNGGCd-~nA~C~~~~~~~~~~ki~C~C~~g~~~~~~~gvf~ 92 (99)
T 1ob1_C 15 NSGCFRHLDEREECKCLLNYKQEGDK-CVENPNPTCNENNGGCD-ADAKCTEEDSGSNGKKITCECTKPDSYPLFDGIFC 92 (99)
T ss_dssp TEEEECCTTSCCEEEECTTEEEETTE-EEECSCCCSTTGGGGCC-TTEEEECCSCSSSSCCCEEEECSTTCCEEGGGTEE
T ss_pred CCCeEEcCCCCEEEEecCCeecCCCe-EeeCCCCChhhcCCCcC-CCceeEecCCcccCCceEeEeCCCCcccceeEEEe
Confidence 48897754 8999999999998855 8766 589876 7899 899999775 6799999999742 2444444
Q ss_pred c
Q 006839 560 I 560 (629)
Q Consensus 560 ~ 560 (629)
.
T Consensus 93 ~ 93 (99)
T 1ob1_C 93 S 93 (99)
T ss_dssp C
T ss_pred c
Confidence 3
No 91
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=97.16 E-value=0.00032 Score=74.95 Aligned_cols=81 Identities=30% Similarity=0.769 Sum_probs=54.9
Q ss_pred CceeeeeCCCCCeeEeCCCccccccCCCCcccCCCCCCCCCCCCCCccceeeeCCCceeeCCCCcccCCccCCCC-C---
Q 006839 444 RGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSENGKCQCPPGFKGDGVKSCVD-I--- 519 (629)
Q Consensus 444 g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~~~~~~C~C~~Gf~g~~~~~C~d-i--- 519 (629)
+.+.|.|++ || .|+. |+. .|. +|.+. +.|.+ .++.|.|++||.|.. |+. .
T Consensus 183 ~~~~c~C~~--g~--~G~~---C~~----~C~----~C~~~-------G~C~~-~~g~C~C~~G~~G~~---Ce~~C~~g 236 (423)
T 2gy5_A 183 RLIVRRCEA--QK--WGPE---CNH----LCT----ACMNN-------GVCHE-DTGECICPPGFMGRT---CEKACELH 236 (423)
T ss_dssp EEEECSSCT--TE--ESTT---SCE----ECC----CCCTT-------CEECT-TTCCEECCTTEESTT---SCEECCTT
T ss_pred cccCCcCCC--CC--CCCC---CCC----CCC----CCCCC-------CEEEC-CCCcEeCCCCccCCC---cccccCCC
Confidence 456788998 54 4443 753 342 45544 77865 367999999999987 653 2
Q ss_pred -------CCCCCCCCCCCCCCceeeCCCceeEecCCCCccc
Q 006839 520 -------DECKERKACQCSECSCKDTWGSYECTCSGDLLYI 553 (629)
Q Consensus 520 -------deC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~ 553 (629)
++|...+.|. +++.|. .++|+|.|++||.+.
T Consensus 237 ~~g~~C~~~C~~~~~C~-~~g~C~--~~~~~C~C~~G~~G~ 274 (423)
T 2gy5_A 237 TFGRTCKERCSGQEGCK-SYVFCL--PDPYGCSCATGWKGL 274 (423)
T ss_dssp EESTTSCEECCSTTTTT-TCCEEE--TTTTEEECCBTCBSG
T ss_pred CCCCCcCccCCCCCCCC-CCCEEC--CCCCeEEeCCCcccc
Confidence 2454335677 667784 688999999999743
No 92
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=97.11 E-value=0.0004 Score=57.23 Aligned_cols=63 Identities=25% Similarity=0.602 Sum_probs=50.6
Q ss_pred CccccccC-CCceeeeeCCCCCeeEeCCCccccccCCCCcccCCCCCCCCCCCCCCccceeeeCC------CceeeCCCC
Q 006839 435 NVTACKDT-FRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSE------NGKCQCPPG 507 (629)
Q Consensus 435 ~~~~C~n~-~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~~~------~~~C~C~~G 507 (629)
.++.|.+. +|.+.|+|.+ || .+|| ..|..+..+.|..++++|... |.|+... ...|.|.+|
T Consensus 14 ~NA~C~r~~~g~e~C~C~~--gy--~gdg-~~Cv~~~~~sC~~nNGGCd~n-------A~C~~~~~~~~~~ki~C~C~~g 81 (99)
T 1ob1_C 14 QNSGCFRHLDEREECKCLL--NY--KQEG-DKCVENPNPTCNENNGGCDAD-------AKCTEEDSGSNGKKITCECTKP 81 (99)
T ss_dssp TTEEEECCTTSCCEEEECT--TE--EEET-TEEEECSCCCSTTGGGGCCTT-------EEEECCSCSSSSCCCEEEECST
T ss_pred CCCCeEEcCCCCEEEEecC--Ce--ecCC-CeEeeCCCCChhhcCCCcCCC-------ceeEecCCcccCCceEeEeCCC
Confidence 56999885 8999999999 55 4567 779876446899888999887 9997653 478999999
Q ss_pred cc
Q 006839 508 FK 509 (629)
Q Consensus 508 f~ 509 (629)
|.
T Consensus 82 ~~ 83 (99)
T 1ob1_C 82 DS 83 (99)
T ss_dssp TC
T ss_pred Cc
Confidence 86
No 93
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.88 E-value=0.00022 Score=54.01 Aligned_cols=44 Identities=25% Similarity=0.535 Sum_probs=33.5
Q ss_pred CcccccCCCCCCCCCcCCCc--cccccCCCceeeeeCCCCCeeEeCCCccccccCCCCccc
Q 006839 417 ETNECLDNNGGCWQDKTANV--TACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCK 475 (629)
Q Consensus 417 d~deC~~~~~~C~~~~~~~~--~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~ 475 (629)
++|+|..+| |. ++ +.|+++.++|.|.|++ ||.. | ..|+.. ++|.
T Consensus 10 ~~d~C~snP--C~-----nga~gtC~~~~g~y~C~C~~--Gy~~-G---~~C~~~--~~C~ 55 (61)
T 2k2s_B 10 TPAACSSNP--CG-----PEAAGTCKETNSGYICRCNQ--GYRI-S---LDGTGN--VTCI 55 (61)
T ss_dssp SCCHHHHCS--SC-----SSSCCEEEECSSEEEEECCT--TEEE-E---ECSSSC--EEEE
T ss_pred CCCcCcCCC--Cc-----CCCccccccCCCceEeECCC--CCcc-C---CCCCCC--CEec
Confidence 789998655 97 66 7999999999999999 6642 3 447754 5564
No 94
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=96.88 E-value=0.00055 Score=48.72 Aligned_cols=38 Identities=18% Similarity=0.384 Sum_probs=30.6
Q ss_pred CCCCCCCC--CCCCCCCCceeeCC--CceeEecCCCCcccCCCCcccc
Q 006839 518 DIDECKER--KACQCSECSCKDTW--GSYECTCSGDLLYIRDHDTCIS 561 (629)
Q Consensus 518 dideC~~~--~~C~~~~~~C~nt~--Gsy~C~C~~G~~~~~~g~~C~~ 561 (629)
+||+|... ++|. + ++|++.. ++|.|.|++||+ |..|..
T Consensus 2 ~i~~C~~~~~~pC~-n-G~C~~~~~~~~~~C~C~~Gyt----G~~Ce~ 43 (46)
T 1k36_A 2 SITKCSSDMNGYCL-H-GQCIYLVDMSQNYCRCEVGYT----GVRCEH 43 (46)
T ss_dssp CEECCCTTCCSSCS-S-EEEEEETTTTEEEEEECTTCS----STTSCC
T ss_pred ccccCCCCCCCCCC-C-CEeeccCCCCCEEEECCCCCc----cCCCCc
Confidence 67899872 4998 7 7999755 789999999997 667764
No 95
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.80 E-value=0.00057 Score=62.59 Aligned_cols=51 Identities=27% Similarity=0.625 Sum_probs=41.4
Q ss_pred CCcccCCccCCCCCCCCCCC--CCCCCCCCceeeCCCceeEecCCCCcccCCCCcccc
Q 006839 506 PGFKGDGVKSCVDIDECKER--KACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCIS 561 (629)
Q Consensus 506 ~Gf~g~~~~~C~dideC~~~--~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~~ 561 (629)
.||.... .+.|+|||... ..|. +.|.|+.|+|.|.|.+||.+..++++|..
T Consensus 106 ~GF~~~y--~~~d~~eC~~~~~~~C~---~~C~n~~g~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 106 TGFAAYY--VATDINECTDFVDVPCS---HFCNNFIGGYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp CEEEEEE--EEEECCTTTC-CCCCSS---SEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred ccceeee--ecccCcccCCCCCCCCC---CcccCcCCCEEEecCCCcEECCCCCcccc
Confidence 4665443 26789999864 4687 78999999999999999999999999974
No 96
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=96.80 E-value=0.00094 Score=47.26 Aligned_cols=36 Identities=19% Similarity=0.410 Sum_probs=28.7
Q ss_pred CCCCC--CCCCCCCCcee--eCCCceeEecCCCCcccCCCCcccc
Q 006839 521 ECKER--KACQCSECSCK--DTWGSYECTCSGDLLYIRDHDTCIS 561 (629)
Q Consensus 521 eC~~~--~~C~~~~~~C~--nt~Gsy~C~C~~G~~~~~~g~~C~~ 561 (629)
||... .+|. ++++|+ +..++|.|.|++||+ |..|..
T Consensus 2 ~C~~~~~~pC~-ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~ 41 (45)
T 1a3p_A 2 GXPSSYDGYCL-NGGVXMHIESLDSYTCNCVIGYS----GDRCQT 41 (45)
T ss_dssp CCTTCCSSCCS-SSCEEEECTTTSSEEEECCTTEE----TTTTCE
T ss_pred CcccCCCCCCC-CCCEEEeecCCCCEEEEcCCCCc----CCcCCc
Confidence 45542 4898 889998 788999999999997 667764
No 97
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.77 E-value=0.00043 Score=72.16 Aligned_cols=43 Identities=23% Similarity=0.653 Sum_probs=29.1
Q ss_pred CCCCCCCCCCCCCCCceeeCCCceeEecCCCCcccCCCCccccccc
Q 006839 519 IDECKERKACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCISKTA 564 (629)
Q Consensus 519 ideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~~~~~ 564 (629)
||||..++.|. +.|.|+.|+|.|.|++||.+..++.+|.....
T Consensus 1 i~ec~~~~~C~---~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~~ 43 (349)
T 3v64_C 1 VNECAEEGYCS---QGCTNSEGAFQCWCEAGYELRPDRRSCKALGP 43 (349)
T ss_dssp --------CCS---SEECCC---CCEECCTTEEECTTSSCEEESSS
T ss_pred CcccCCCCCCc---CeeecCCCCeEEECCCCccCCCCCCccccccc
Confidence 68998447899 89999999999999999999999999987543
No 98
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.71 E-value=0.00023 Score=52.22 Aligned_cols=43 Identities=23% Similarity=0.617 Sum_probs=33.4
Q ss_pred ceeeCCCCcccCCccCCCCCCCCCCCCCCCCCCCceee----CCCceeEecCCCCcccCCCCccccc
Q 006839 500 GKCQCPPGFKGDGVKSCVDIDECKERKACQCSECSCKD----TWGSYECTCSGDLLYIRDHDTCISK 562 (629)
Q Consensus 500 ~~C~C~~Gf~g~~~~~C~dideC~~~~~C~~~~~~C~n----t~Gsy~C~C~~G~~~~~~g~~C~~~ 562 (629)
+.|.|++||.. .+|. ++++|++ ..++|.|.|++||. |..|+..
T Consensus 3 ~~C~C~~g~~~---------------~pC~-NGGtC~~~~~~~~~~y~C~C~~Gf~----G~~Ce~~ 49 (52)
T 3ca7_A 3 PTYKCPETFDA---------------WYCL-NDAHCFAVKIADLPVYSCECAIGFM----GQRCEYK 49 (52)
T ss_dssp CCBCCCHHHHH---------------HTSC-TTCEEEEEEETTEEEEEEECCTTEE----STTSCEE
T ss_pred eeeECCCCCcC---------------CcCC-CCCEEecCccCCCCCEEEECCCCCc----CCCCccc
Confidence 46899999861 2677 8899997 35789999999997 6677643
No 99
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.64 E-value=0.00058 Score=63.40 Aligned_cols=46 Identities=22% Similarity=0.559 Sum_probs=39.1
Q ss_pred cccCCCcccccCCCCC---CCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccC
Q 006839 412 VCLSGETNECLDNNGG---CWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVS 469 (629)
Q Consensus 412 ~C~~~d~deC~~~~~~---C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~ 469 (629)
.|. +++||...+++ |. ..|.|+.|+|.|.|++ ||.+.+|+ ++|+++
T Consensus 120 ~~~--di~eC~~~~~~~~~C~-------~~C~n~~g~~~C~C~~--Gy~l~~d~-~~C~~~ 168 (170)
T 1szb_A 120 AAE--DIDECQVAPGEAPTCD-------HHCHNHLGGFYCSCRA--GYVLHRNK-RTCSEQ 168 (170)
T ss_dssp EEE--ECCTTCCCTTSCCSSS-------SEEEEETTEEEEECCT--TEEECTTS-SCEEEC
T ss_pred ecc--ccCcccCCCCCCCccC-------CccccCCCCEEEeCCC--CcEECCCC-Cccccc
Confidence 455 89999876654 87 5899999999999999 99999999 889754
No 100
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.62 E-value=0.00037 Score=75.55 Aligned_cols=56 Identities=32% Similarity=0.821 Sum_probs=19.9
Q ss_pred ceeeeCCCceeeCCCCcccCCccCCCCCCCCCCCCCCCCCCCceeeCCCceeEecCCCCcccCCCCcccccc
Q 006839 492 SACLDSENGKCQCPPGFKGDGVKSCVDIDECKERKACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCISKT 563 (629)
Q Consensus 492 ~~C~~~~~~~C~C~~Gf~g~~~~~C~dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~~~~ 563 (629)
+.|.+. +.|.|++||.|.. |+ +++|.. +|. ++++|++. ++|.|++||. |..|....
T Consensus 402 G~C~~~--~~C~C~~G~~G~~---C~-~~~C~~--~C~-~~g~C~~~---~~C~C~~G~~----G~~C~~~~ 457 (463)
T 2wg3_C 402 GYCTPT--GKCCCSPGWEGDF---CR-TAKCEP--ACR-HGGVCVRP---NKCLCKKGYL----GPQCEQVD 457 (463)
T ss_dssp EEECTT--SCEEECTTEESTT---SC-EECC-----------------------------------------
T ss_pred CccCCC--CeECCCCCcCCCc---CC-cCcCCC--CCC-CCCEECCC---CEEECCCCcc----cCCCCCCc
Confidence 568653 5899999999986 84 778976 798 88999875 7999999997 67777643
No 101
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=96.48 E-value=0.0021 Score=47.21 Aligned_cols=40 Identities=25% Similarity=0.737 Sum_probs=30.9
Q ss_pred CcccccCC-CCCCCCCcCCCccccc--cCCCceeeeeCCCCCeeEeCCCcccccc
Q 006839 417 ETNECLDN-NGGCWQDKTANVTACK--DTFRGRVCECPLVDGVQFKGDGYSHCEV 468 (629)
Q Consensus 417 d~deC~~~-~~~C~~~~~~~~~~C~--n~~g~~~C~C~~~~G~~~~~dg~~~C~~ 468 (629)
++|+|... ..+|. +++.|+ +..++|.|.|++ ||. | ..|+.
T Consensus 2 ~i~~C~~~~~~pC~-----ngg~C~~~~~~~~~~C~C~~--G~~----G-~~Ce~ 44 (53)
T 1egf_A 2 SYPGCPSSYDGYCL-----NGGVCMHIESLDSYTCNCVI--GYS----G-DRCQT 44 (53)
T ss_dssp EECCCCTTSSCSSC-----SSCEEEEESSSSCEEEECCT--TCC----S-SSSCC
T ss_pred CcccCCCCCCCcCC-----CCcEEEeeCCCCCEEEECCC--CCc----C-CcCCc
Confidence 68899764 23587 679999 889999999999 663 4 55874
No 102
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=96.46 E-value=0.0022 Score=72.09 Aligned_cols=103 Identities=21% Similarity=0.431 Sum_probs=68.3
Q ss_pred eeecc------CCCccCCCCccccCCCcccccCC-CCCCCCCcCCC--ccccccCCCceeeeeCCCCCeeEeCCCccccc
Q 006839 397 LKAIC------SGFEETTEPAVCLSGETNECLDN-NGGCWQDKTAN--VTACKDTFRGRVCECPLVDGVQFKGDGYSHCE 467 (629)
Q Consensus 397 ~c~cc------~Gf~~~~~~~~C~~~d~deC~~~-~~~C~~~~~~~--~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~ 467 (629)
.|.|. +|| .|..|+. +.+.|... ...|. + ++.|.+ | .|.|.+ || .| ..|+
T Consensus 494 ~C~C~~~~~~~~G~----~G~~Ce~-~~~~C~~~~~~~C~-----~~~~G~C~~--g--~C~C~~--G~--~G---~~Ce 552 (687)
T 3k6s_B 494 QCLCHTSDVPGKLI----YGQYCEC-DTINCERYNGQVCG-----GPGRGLCFC--G--KCRCHP--GF--EG---SACQ 552 (687)
T ss_dssp EEEECCCCSTTCCE----ESTTSCE-ESSCSCEETTEETS-----HHHHEEEET--T--EEEECT--TC--CS---TTSC
T ss_pred EEEcCCCCCCCCCc----ccccccc-ccccccCCCCcCcC-----CCCCCeEEC--C--EEEcCC--CC--cC---CCCc
Confidence 68888 888 5777874 56778643 22476 5 688975 2 799999 54 44 4476
Q ss_pred c-CCCCcccCCC-CCCCCCCCCCCccceeeeCCCceeeCCCCcccCCccCCCCCCCCCCCCCCCCCCCcee
Q 006839 468 V-SGPGKCKINN-GGCWHESKDGHTYSACLDSENGKCQCPPGFKGDGVKSCVDIDECKERKACQCSECSCK 536 (629)
Q Consensus 468 ~-~~~~~C~~~~-~~C~~~~~~~~~~~~C~~~~~~~C~C~~Gf~g~~~~~C~dideC~~~~~C~~~~~~C~ 536 (629)
- .+.+.|.... ..|... +.|.. ..|.|++||.|.. |+.-..|. + +|. +++.|+
T Consensus 553 c~~~~~~C~~~~g~~Cs~~-------G~C~~---g~C~C~~Gy~G~~---Ce~c~~C~-~-~C~-~~g~Cv 607 (687)
T 3k6s_B 553 CERTTEGCLNPRRVECSGR-------GRCRC---NVCECHSGYQLPL---CQECPGCP-S-PCG-KYISCA 607 (687)
T ss_dssp SCCSSCTTBCTTCSBTSSS-------CCBCS---SCBCCSTTCCTTT---TCCCTTSC-C-CCT-TTHHHH
T ss_pred cCCCCCCCCCCCCCCCCCC-------CcCCC---CEEECCCCCcCCC---CCCCCCCC-c-ccC-CCCCCC
Confidence 1 1125676432 245443 67765 5799999999987 76545674 2 787 777776
No 103
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=96.41 E-value=0.0011 Score=50.72 Aligned_cols=37 Identities=19% Similarity=0.408 Sum_probs=30.3
Q ss_pred CCCCCCCCCCCCCCCceee-----CCCceeEecCCCCcccCCCCcccc
Q 006839 519 IDECKERKACQCSECSCKD-----TWGSYECTCSGDLLYIRDHDTCIS 561 (629)
Q Consensus 519 ideC~~~~~C~~~~~~C~n-----t~Gsy~C~C~~G~~~~~~g~~C~~ 561 (629)
-|+|..+ +|. ++++|++ ..++|.|.|++||. |..|..
T Consensus 6 c~~C~~~-pC~-ngG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce~ 47 (63)
T 1hae_A 6 CAEKEKT-FCV-NGGECFMVKDLSNPSRYLCKCQPGFT----GARCTE 47 (63)
T ss_dssp CCHHHHT-TSC-TTCEEEEEESSSSSCCEEEECCTTEE----STTSCE
T ss_pred cCCCCCC-cCC-CCcEEecCCccCCCCCEEEECCCCCc----CCccCc
Confidence 3677766 999 8899997 67899999999997 667753
No 104
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=96.35 E-value=0.0031 Score=69.48 Aligned_cols=56 Identities=23% Similarity=0.601 Sum_probs=12.6
Q ss_pred CceeeCCCCcccCCccCC--------CCCCCCCCCCCCCCCCCceeeC--CCceeEecCCCCcccCCCCccc
Q 006839 499 NGKCQCPPGFKGDGVKSC--------VDIDECKERKACQCSECSCKDT--WGSYECTCSGDLLYIRDHDTCI 560 (629)
Q Consensus 499 ~~~C~C~~Gf~g~~~~~C--------~dideC~~~~~C~~~~~~C~nt--~Gsy~C~C~~G~~~~~~g~~C~ 560 (629)
++.|.|++||.|..-..| .++++|..- +|. +++.|.++ ..+++|.|++||. |..|.
T Consensus 459 tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C-~C~-~~gs~~~~C~~~tG~C~C~~G~~----G~~Ce 524 (525)
T 4aqs_A 459 TGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPC-DCD-LGGALNNSCSEDSGQCSCLPHMI----GRQCN 524 (525)
T ss_dssp TCCBCBCTTCCSTTTCC-------------------------------------------------------
T ss_pred CCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCC-CCC-CCCccCCccCCCCCeeECCCCCc----CCCCC
Confidence 568999999998762112 256777654 566 55555443 2455899999997 56664
No 105
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=96.25 E-value=0.0032 Score=60.74 Aligned_cols=92 Identities=23% Similarity=0.572 Sum_probs=59.3
Q ss_pred CccccccCCCceeeeeCCCCCeeEeCCCccccccCCCC---------cccCC--CCCCCCCCCCCCccceeeeCCCceee
Q 006839 435 NVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPG---------KCKIN--NGGCWHESKDGHTYSACLDSENGKCQ 503 (629)
Q Consensus 435 ~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~---------~C~~~--~~~C~~~~~~~~~~~~C~~~~~~~C~ 503 (629)
+++.|.. ..|.|.+ || .| ..|+-. .+ .|... ...|. .++.|.. ..|.
T Consensus 100 g~G~C~~----g~C~C~~--G~--~G---~~Cec~-~~~~~~~~~~~~C~~~~~~~~Cs-------g~G~C~~---g~C~ 157 (217)
T 2p28_B 100 GKGFLEC----GICRCDT--GY--IG---KNCECQ-TQGRSSQELEGSCRKDNNSIICS-------GLGDCVC---GQCL 157 (217)
T ss_dssp TSEEEET----TEEEECT--TE--ES---TTSCEE-CCCCC-GGGGGGGBSSTTSCBGG-------GTEEEET---TEEE
T ss_pred CCceEEC----CEEECCC--Cc--cC---Cccccc-CcccccccCCCcCCCCCCCCCCC-------CCCEEeC---CceE
Confidence 5588874 4799999 54 44 447521 11 24321 12233 2367763 4899
Q ss_pred CCCC------cccCCccCCC-CCCCCCCC--CCCCCCC--CceeeCCCceeEecCCCCcccCCCCccc
Q 006839 504 CPPG------FKGDGVKSCV-DIDECKER--KACQCSE--CSCKDTWGSYECTCSGDLLYIRDHDTCI 560 (629)
Q Consensus 504 C~~G------f~g~~~~~C~-dideC~~~--~~C~~~~--~~C~nt~Gsy~C~C~~G~~~~~~g~~C~ 560 (629)
|.+| |.|.. |+ ++++|... .+|. .+ ++|.+ ..|.|.+||. |..|.
T Consensus 158 C~~gw~~~~~~~G~~---Ce~~~~~C~~~~g~~C~-~~~~G~C~~----g~C~C~~G~~----G~~C~ 213 (217)
T 2p28_B 158 CHTSDVPGKLIYGQY---CECDTINCERYNGQVCG-GPGRGLCFC----GKCRCHPGFE----GSACQ 213 (217)
T ss_dssp ECCCCSTTCCEESTT---SCEESSCSCEETTEETT-CTTTEEEET----TEEEECTTEE----STTSC
T ss_pred CCCCCCCcccEECCC---cccCCccCCCCCCCCCC-CCCCcEEeC----CeeECCCCCc----cCCcC
Confidence 9999 56665 86 67788753 3687 66 88985 3899999997 55664
No 106
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=96.14 E-value=0.0028 Score=63.86 Aligned_cols=46 Identities=26% Similarity=0.645 Sum_probs=39.7
Q ss_pred CcccccCC-CCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCCCcc
Q 006839 417 ETNECLDN-NGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKC 474 (629)
Q Consensus 417 d~deC~~~-~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C 474 (629)
+.|||... +++|. +.|.|+.++|.|.|.+ ||.+..|+ ++|.+. ++|
T Consensus 1 ~~~eC~~~~~~~C~-------~~C~~~~~~~~C~C~~--G~~l~~d~-~sC~p~--~~c 47 (283)
T 3f1s_B 1 AKNECHPERTDGCQ-------HFCLPGQESYTCSCAQ--GYRLGEDH-KQCVPH--DQC 47 (283)
T ss_dssp --CCCCSSCSSSCS-------SBCCCCTTSCCCBCCT--TEEECTTS-SCEEEC--STT
T ss_pred CCCccCCCCCCCCC-------CEeeCCCCCeEecCCC--CcccCCCC-Cccccc--ccc
Confidence 46899887 78998 8999999999999999 99999999 999976 555
No 107
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=96.08 E-value=0.0027 Score=48.43 Aligned_cols=42 Identities=21% Similarity=0.561 Sum_probs=32.2
Q ss_pred CcccCCCCCCCCCCCCCCccceeee-----CC-CceeeCCCCcccCCccCCC-CCCCCCCC
Q 006839 472 GKCKINNGGCWHESKDGHTYSACLD-----SE-NGKCQCPPGFKGDGVKSCV-DIDECKER 525 (629)
Q Consensus 472 ~~C~~~~~~C~~~~~~~~~~~~C~~-----~~-~~~C~C~~Gf~g~~~~~C~-dideC~~~ 525 (629)
++|..+ +|.+. ++|++ .. +|.|.|++||.|.. |+ ++|+|...
T Consensus 7 ~~C~~~--pC~ng-------G~C~~~~~~~~~~~y~C~C~~Gf~G~~---Ce~~i~~~~~~ 55 (63)
T 1hae_A 7 AEKEKT--FCVNG-------GECFMVKDLSNPSRYLCKCQPGFTGAR---CTENVPMKVQN 55 (63)
T ss_dssp CHHHHT--TSCTT-------CEEEEEESSSSSCCEEEECCTTEESTT---SCEECCSSCTT
T ss_pred CCCCCC--cCCCC-------cEEecCCccCCCCCEEEECCCCCcCCc---cCcCcCccccc
Confidence 566543 67665 78986 45 89999999999886 86 88888654
No 108
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.83 E-value=0.0032 Score=65.46 Aligned_cols=41 Identities=27% Similarity=0.637 Sum_probs=27.8
Q ss_pred cccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccC
Q 006839 418 TNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVS 469 (629)
Q Consensus 418 ~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~ 469 (629)
+|||. .+++|. +.|.|++|+|.|.|++ ||.+..|+ ++|.+.
T Consensus 1 i~ec~-~~~~C~-------~~C~n~~g~~~C~C~~--g~~l~~d~-~~C~~~ 41 (349)
T 3v64_C 1 VNECA-EEGYCS-------QGCTNSEGAFQCWCEA--GYELRPDR-RSCKAL 41 (349)
T ss_dssp ---------CCS-------SEECCC---CCEECCT--TEEECTTS-SCEEES
T ss_pred CcccC-CCCCCc-------CeeecCCCCeEEECCC--CccCCCCC-Cccccc
Confidence 58998 677898 8999999999999999 99999999 899865
No 109
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=95.75 E-value=0.004 Score=62.73 Aligned_cols=42 Identities=29% Similarity=0.680 Sum_probs=36.3
Q ss_pred CCCCCCCC--CCCCCCCCceeeCCCceeEecCCCCcccCCCCccccc
Q 006839 518 DIDECKER--KACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCISK 562 (629)
Q Consensus 518 dideC~~~--~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~~~ 562 (629)
|.|||... +.|. +.|.|+.|+|+|.|.+||.+..++.+|.+.
T Consensus 1 ~~~eC~~~~~~~C~---~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~ 44 (283)
T 3f1s_B 1 AKNECHPERTDGCQ---HFCLPGQESYTCSCAQGYRLGEDHKQCVPH 44 (283)
T ss_dssp --CCCCSSCSSSCS---SBCCCCTTSCCCBCCTTEEECTTSSCEEEC
T ss_pred CCCccCCCCCCCCC---CEeeCCCCCeEecCCCCcccCCCCCccccc
Confidence 46899764 6898 999999999999999999999999999984
No 110
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=95.70 E-value=0.0038 Score=45.77 Aligned_cols=32 Identities=19% Similarity=0.630 Sum_probs=27.0
Q ss_pred CCCCCCCCcee--eCCCceeEecCCCCcccCCCCccccc
Q 006839 526 KACQCSECSCK--DTWGSYECTCSGDLLYIRDHDTCISK 562 (629)
Q Consensus 526 ~~C~~~~~~C~--nt~Gsy~C~C~~G~~~~~~g~~C~~~ 562 (629)
.+|. ++++|+ +..++|.|.|++||+ |..|...
T Consensus 12 ~pC~-nGG~C~~~~~~~~~~C~C~~Gyt----G~~Ce~~ 45 (53)
T 1nql_B 12 GYCL-HDGVCMYIEALDKYACNCVVGYI----GERCQYR 45 (53)
T ss_dssp CEEC-TTCEEEEETTTTEEEEEECTTEE----STTSCEE
T ss_pred CCCC-CCeEEeeecCCCCEEEecCCCCc----CCCCCcC
Confidence 5898 889998 677899999999997 6778654
No 111
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=95.47 E-value=0.01 Score=41.83 Aligned_cols=36 Identities=22% Similarity=0.626 Sum_probs=26.0
Q ss_pred cccCC-CCCCCCCcCCCccccc--cCCCceeeeeCCCCCeeEeCCCccccc
Q 006839 420 ECLDN-NGGCWQDKTANVTACK--DTFRGRVCECPLVDGVQFKGDGYSHCE 467 (629)
Q Consensus 420 eC~~~-~~~C~~~~~~~~~~C~--n~~g~~~C~C~~~~G~~~~~dg~~~C~ 467 (629)
+|... ..+|. +++.|+ +..++|.|.|++ ||. | ..|+
T Consensus 2 ~C~~~~~~pC~-----ngg~C~~~~~~~~~~C~C~~--G~~----G-~~Ce 40 (45)
T 1a3p_A 2 GXPSSYDGYCL-----NGGVXMHIESLDSYTCNCVI--GYS----G-DRCQ 40 (45)
T ss_dssp CCTTCCSSCCS-----SSCEEEECTTTSSEEEECCT--TEE----T-TTTC
T ss_pred CcccCCCCCCC-----CCCEEEeecCCCCEEEEcCC--CCc----C-CcCC
Confidence 56543 22487 679998 788999999999 664 4 4576
No 112
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=95.31 E-value=0.0058 Score=55.90 Aligned_cols=30 Identities=33% Similarity=0.821 Sum_probs=25.3
Q ss_pred ceeeeCC-CceeeCCCCcccCCccCCCCCCCCCC
Q 006839 492 SACLDSE-NGKCQCPPGFKGDGVKSCVDIDECKE 524 (629)
Q Consensus 492 ~~C~~~~-~~~C~C~~Gf~g~~~~~C~dideC~~ 524 (629)
+.|.+.. +|.|.|++||.|.. |++++||..
T Consensus 131 g~C~~~~~~~~c~C~~g~~G~~---Ce~~~~c~~ 161 (162)
T 1g1s_A 131 GECLETIGNYTCSCYPGFYGPE---CEYVRDDDD 161 (162)
T ss_dssp EEEEECSSSEEEEECTTEESTT---SCEECC---
T ss_pred CEEecCCCCceEeCCCCCcCcc---cccCcccCC
Confidence 7899999 99999999999976 999999975
No 113
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=95.24 E-value=0.0083 Score=54.66 Aligned_cols=45 Identities=31% Similarity=0.647 Sum_probs=36.9
Q ss_pred cccCCCcccccCC-CCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCcccccc
Q 006839 412 VCLSGETNECLDN-NGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEV 468 (629)
Q Consensus 412 ~C~~~d~deC~~~-~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~ 468 (629)
.+. ++|||... ...|. +.|.|+.|+|.|.|.+ ||.+.+++ ++|++
T Consensus 113 ~~~--d~~eC~~~~~~~C~-------~~C~n~~g~~~C~C~~--Gy~l~~~~-~~C~~ 158 (159)
T 1nzi_A 113 VAT--DINECTDFVDVPCS-------HFCNNFIGGYFCSCPP--EYFLHDDM-KNCGV 158 (159)
T ss_dssp EEE--ECCTTTC-CCCCSS-------SEEEEETTEEEEECCT--TCEECTTS-SCEEC
T ss_pred ecc--cCcccCCCCCCCCC-------CcccCcCCCEEEecCC--CcEECCCC-Ccccc
Confidence 456 88999764 34686 6899999999999999 99999999 88864
No 114
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.93 E-value=0.0067 Score=65.57 Aligned_cols=75 Identities=33% Similarity=0.744 Sum_probs=31.6
Q ss_pred eeeccCCCccCCCCccccCCCcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCCCcccC
Q 006839 397 LKAICSGFEETTEPAVCLSGETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKI 476 (629)
Q Consensus 397 ~c~cc~Gf~~~~~~~~C~~~d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~ 476 (629)
.+.|..|| .+..|. +++|.. .|. + +.|.+. +.|.|++ || .+ ..|+ + ++|..
T Consensus 378 p~~C~~~~----~g~~c~---~~~C~~---~C~-----n-G~C~~~---~~C~C~~--G~--~G---~~C~-~--~~C~~ 428 (463)
T 2wg3_C 378 PEECRATV----QPAQTL---TSECSR---LCR-----N-GYCTPT---GKCCCSP--GW--EG---DFCR-T--AKCEP 428 (463)
T ss_dssp CGGGCCCC----CCCCCC---CCHHHH---HCC-----S-EEECTT---SCEEECT--TE--ES---TTSC-E--ECC--
T ss_pred cccCCCCC----cCCCCc---cccccC---CCC-----C-CccCCC---CeECCCC--Cc--CC---CcCC-c--CcCCC
Confidence 35566776 344565 577864 386 4 789864 4899999 55 44 4586 3 57863
Q ss_pred CCCCCCCCCCCCCccceeeeCCCceeeCCCCcccCC
Q 006839 477 NNGGCWHESKDGHTYSACLDSENGKCQCPPGFKGDG 512 (629)
Q Consensus 477 ~~~~C~~~~~~~~~~~~C~~~~~~~C~C~~Gf~g~~ 512 (629)
+|.+. +.|++. +.|.|++||.|..
T Consensus 429 ---~C~~~-------g~C~~~--~~C~C~~G~~G~~ 452 (463)
T 2wg3_C 429 ---ACRHG-------GVCVRP--NKCLCKKGYLGPQ 452 (463)
T ss_dssp ------------------------------------
T ss_pred ---CCCCC-------CEECCC--CEEECCCCcccCC
Confidence 67654 778764 7999999999876
No 115
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=94.89 E-value=0.013 Score=41.56 Aligned_cols=39 Identities=28% Similarity=0.714 Sum_probs=27.2
Q ss_pred CcccccCC-CCCCCCCcCCCccccccCC--CceeeeeCCCCCeeEeCCCcccccc
Q 006839 417 ETNECLDN-NGGCWQDKTANVTACKDTF--RGRVCECPLVDGVQFKGDGYSHCEV 468 (629)
Q Consensus 417 d~deC~~~-~~~C~~~~~~~~~~C~n~~--g~~~C~C~~~~G~~~~~dg~~~C~~ 468 (629)
++++|... ..+|. + +.|.+.. ++|.|.|++ || . | ..|+.
T Consensus 2 ~i~~C~~~~~~pC~-----n-G~C~~~~~~~~~~C~C~~--Gy--t--G-~~Ce~ 43 (46)
T 1k36_A 2 SITKCSSDMNGYCL-----H-GQCIYLVDMSQNYCRCEV--GY--T--G-VRCEH 43 (46)
T ss_dssp CEECCCTTCCSSCS-----S-EEEEEETTTTEEEEEECT--TC--S--S-TTSCC
T ss_pred ccccCCCCCCCCCC-----C-CEeeccCCCCCEEEECCC--CC--c--c-CCCCc
Confidence 57888761 23487 6 7999754 789999999 55 4 4 44763
No 116
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=94.47 E-value=0.013 Score=53.47 Aligned_cols=47 Identities=30% Similarity=0.638 Sum_probs=33.7
Q ss_pred CccccCCCcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccccCCCCccc
Q 006839 410 PAVCLSGETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCK 475 (629)
Q Consensus 410 ~~~C~~~d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~ 475 (629)
+.+|+ .++|...+ |. +++.|.++.++|.|.|++ ||. | ..|+.+ ++|.
T Consensus 114 ~fICe---~~~c~~~~--C~-----~~g~C~~~~~~~~c~C~~--g~~----G-~~Ce~~--~~c~ 160 (162)
T 1g1s_A 114 HALCY---TASCQDMS--CS-----KQGECLETIGNYTCSCYP--GFY----G-PECEYV--RDDD 160 (162)
T ss_dssp EEEEE---ECCCCTTG--GG-----GSEEEEECSSSEEEEECT--TEE----S-TTSCEE--CC--
T ss_pred CEEEE---eCCCcCCC--CC-----CCCEEecCCCCceEeCCC--CCc----C-cccccC--cccC
Confidence 44565 45676544 76 569999999999999999 665 4 569977 6775
No 117
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=94.08 E-value=0.029 Score=57.15 Aligned_cols=41 Identities=24% Similarity=0.720 Sum_probs=33.8
Q ss_pred CCCCCCC----CCCCCCCCCceeeCC------CceeEecCCCCcccCCCCcccc
Q 006839 518 DIDECKE----RKACQCSECSCKDTW------GSYECTCSGDLLYIRDHDTCIS 561 (629)
Q Consensus 518 dideC~~----~~~C~~~~~~C~nt~------Gsy~C~C~~G~~~~~~g~~C~~ 561 (629)
+.++|.. ++.|+ +.|.+++ ++|+|.|+.||.+..|+++|.+
T Consensus 266 ~~n~C~~~~~~ng~Cs---~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~~ 316 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQ---YLCLPAPQINPHSPKFTCACPDGMLLARDMRSCLT 316 (316)
T ss_dssp CCCTTSSSSSGGGGCS---SEEEECCCCSTTCCSEEEECCTTCEECTTSSCEEC
T ss_pred ccccccccccCCCCcC---cccCCCccccCCCCCeEeeCCCCCEECCCCCccCC
Confidence 4567764 34688 8999886 6899999999999999999974
No 118
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=93.86 E-value=0.028 Score=63.22 Aligned_cols=42 Identities=24% Similarity=0.571 Sum_probs=37.8
Q ss_pred CCCCCCCC-CCCCCCCCceeeCC-CceeEecCCCCcccCCCCccccc
Q 006839 518 DIDECKER-KACQCSECSCKDTW-GSYECTCSGDLLYIRDHDTCISK 562 (629)
Q Consensus 518 dideC~~~-~~C~~~~~~C~nt~-Gsy~C~C~~G~~~~~~g~~C~~~ 562 (629)
.+|||..+ +.|+ +.|.+++ |+|+|.|++||.+..++.+|.+.
T Consensus 264 ~~n~C~~~ng~C~---~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~ 307 (628)
T 4a0p_A 264 GWNECASSNGHCS---HLCLAVPVGGFVCGCPAHYSLNADNRTCSAP 307 (628)
T ss_dssp CCCTTTTTGGGCS---SEEEEETTTEEEEECSTTCEECTTSSCEECC
T ss_pred cceEeccCCCCcc---hhhhcCCCCCeeEEcCCCcEecccCCcCccc
Confidence 67899875 6898 8999999 99999999999999999999864
No 119
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=93.84 E-value=0.027 Score=61.95 Aligned_cols=39 Identities=21% Similarity=0.569 Sum_probs=34.3
Q ss_pred CCCCCCCCCCCCCCCceee-CCCceeEecC-CCCcccCCCCcccccc
Q 006839 519 IDECKERKACQCSECSCKD-TWGSYECTCS-GDLLYIRDHDTCISKT 563 (629)
Q Consensus 519 ideC~~~~~C~~~~~~C~n-t~Gsy~C~C~-~G~~~~~~g~~C~~~~ 563 (629)
+|+|..+ +|. ++++|.+ ..++|.|.|+ .||. |..|+...
T Consensus 2 ~d~C~~~-PC~-ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~~~ 42 (553)
T 1q4g_A 2 VNPCCYY-PCQ-HQGICVRFGLDRYQCDCTRTGYS----GPNCTIPE 42 (553)
T ss_dssp CCGGGGC-CCC-TTCEEEEETTTEEEEECTTSSEE----TTTTCEEC
T ss_pred CCcCCCC-CCC-CCCCcCCCCCCceEeeCCCCCcC----CCCCCCCc
Confidence 6899987 999 9999999 8999999999 9997 77887643
No 120
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=93.15 E-value=0.044 Score=55.75 Aligned_cols=41 Identities=32% Similarity=0.601 Sum_probs=35.3
Q ss_pred CcccccCC---CCCCCCCcCCCccccccCC------CceeeeeCCCCCeeEeCCCccccc
Q 006839 417 ETNECLDN---NGGCWQDKTANVTACKDTF------RGRVCECPLVDGVQFKGDGYSHCE 467 (629)
Q Consensus 417 d~deC~~~---~~~C~~~~~~~~~~C~n~~------g~~~C~C~~~~G~~~~~dg~~~C~ 467 (629)
..|+|... +++|. +.|.+++ ++|.|.|+. ||.+..|+ ++|.
T Consensus 266 ~~n~C~~~~~~ng~Cs-------~~C~~~p~~~~~~~~~~C~C~~--g~~l~~d~-~~C~ 315 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQ-------YLCLPAPQINPHSPKFTCACPD--GMLLARDM-RSCL 315 (316)
T ss_dssp CCCTTSSSSSGGGGCS-------SEEEECCCCSTTCCSEEEECCT--TCEECTTS-SCEE
T ss_pred ccccccccccCCCCcC-------cccCCCccccCCCCCeEeeCCC--CCEECCCC-CccC
Confidence 57889876 77898 8999875 689999999 99999999 8885
No 121
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=92.93 E-value=0.049 Score=60.06 Aligned_cols=37 Identities=22% Similarity=0.776 Sum_probs=32.1
Q ss_pred CCCCCCCCCCCCCCCceee-CCCceeEecC-CCCcccCCCCcccc
Q 006839 519 IDECKERKACQCSECSCKD-TWGSYECTCS-GDLLYIRDHDTCIS 561 (629)
Q Consensus 519 ideC~~~~~C~~~~~~C~n-t~Gsy~C~C~-~G~~~~~~g~~C~~ 561 (629)
+|+|..+ +|. ++++|++ ..++|.|.|+ +||. |..|..
T Consensus 1 vd~C~s~-PC~-ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~ 39 (587)
T 3nt1_A 1 ANPCCSN-PCQ-NRGECMSTGFDQYKCDCTRTGFY----GENCTT 39 (587)
T ss_dssp CCTTTTC-CCC-TTCEEEEEETTEEEEECTTSSEE----TTTTCE
T ss_pred CCCCCCC-CCC-CCCEeeCCCCCCeEEecCCCCcc----CCCCCC
Confidence 5889987 999 9999996 5599999999 9997 778875
No 122
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=92.69 E-value=0.048 Score=61.30 Aligned_cols=43 Identities=33% Similarity=0.682 Sum_probs=38.9
Q ss_pred CcccccCCCCCCCCCcCCCccccccCC-CceeeeeCCCCCeeEeCCCccccccC
Q 006839 417 ETNECLDNNGGCWQDKTANVTACKDTF-RGRVCECPLVDGVQFKGDGYSHCEVS 469 (629)
Q Consensus 417 d~deC~~~~~~C~~~~~~~~~~C~n~~-g~~~C~C~~~~G~~~~~dg~~~C~~~ 469 (629)
.+|||..++++|. +.|.+++ ++|.|.|++ ||.+..|+ ++|.+.
T Consensus 264 ~~n~C~~~ng~C~-------~~C~~~~~~~~~C~C~~--g~~l~~d~-~~C~~~ 307 (628)
T 4a0p_A 264 GWNECASSNGHCS-------HLCLAVPVGGFVCGCPA--HYSLNADN-RTCSAP 307 (628)
T ss_dssp CCCTTTTTGGGCS-------SEEEEETTTEEEEECST--TCEECTTS-SCEECC
T ss_pred cceEeccCCCCcc-------hhhhcCCCCCeeEEcCC--CcEecccC-CcCccc
Confidence 6899998888998 8999998 999999999 99999999 899754
No 123
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=92.57 E-value=0.074 Score=54.27 Aligned_cols=42 Identities=19% Similarity=0.489 Sum_probs=34.7
Q ss_pred CCCCCCC-CCCCCCCCceeeCCC--ceeEecCCCCcccCCCCcccccc
Q 006839 519 IDECKER-KACQCSECSCKDTWG--SYECTCSGDLLYIRDHDTCISKT 563 (629)
Q Consensus 519 ideC~~~-~~C~~~~~~C~nt~G--sy~C~C~~G~~~~~~g~~C~~~~ 563 (629)
.++|..+ +.|+ +.|.+.++ +|+|.|+.||.+..|+++|....
T Consensus 267 ~n~C~~~ng~Cs---~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~~ 311 (318)
T 3sov_A 267 TNPCGIDNGGCS---HLCLMSPVKPFYQCACPTGVKLLENGKTCKDGN 311 (318)
T ss_dssp CCTTTTTGGGCS---SEEEECSSTTSEEEECSTTCCBCTTSSCBCC--
T ss_pred ccccccCCCCcc---eEEecCCCCCCeEEECCCCCEECCCCCCCCCCC
Confidence 4678755 6898 89999876 79999999999999999998754
No 124
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=92.49 E-value=0.05 Score=61.01 Aligned_cols=41 Identities=27% Similarity=0.549 Sum_probs=36.7
Q ss_pred CCCCCCCC-CCCCCCCCceeeCCCceeEecCCCCcccCCCCcccc
Q 006839 518 DIDECKER-KACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCIS 561 (629)
Q Consensus 518 dideC~~~-~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~~ 561 (629)
..++|..+ +.|. +.|.+++++|+|.|+.||.+..|+.+|.+
T Consensus 577 ~~~~C~~~ng~C~---~~C~~~~~~~~C~C~~g~~l~~d~~~C~~ 618 (619)
T 3s94_A 577 GSNPCAEENGGCS---HLCLYRPQGLRCACPIGFELISDMKTCIV 618 (619)
T ss_dssp CCCGGGSGGGGCS---SEEEEETTEEEEECCTTCEECSSTTCEEC
T ss_pred ccccCCCCCCChh---HhhccCCCCeEEECCCCCEECCCCCcCCC
Confidence 46889765 6898 99999999999999999999999999975
No 125
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=92.20 E-value=0.063 Score=54.82 Aligned_cols=43 Identities=35% Similarity=0.677 Sum_probs=36.4
Q ss_pred CcccccCCCCCCCCCcCCCccccccCCC--ceeeeeCCCCCeeEeCCCccccccC
Q 006839 417 ETNECLDNNGGCWQDKTANVTACKDTFR--GRVCECPLVDGVQFKGDGYSHCEVS 469 (629)
Q Consensus 417 d~deC~~~~~~C~~~~~~~~~~C~n~~g--~~~C~C~~~~G~~~~~dg~~~C~~~ 469 (629)
..|+|..++++|. ..|...++ +|.|.|+. ||.+..|+ ++|.+-
T Consensus 266 ~~n~C~~~ng~Cs-------~~C~~~~~~~~~~C~C~~--g~~l~~d~-~~c~~~ 310 (318)
T 3sov_A 266 ATNPCGIDNGGCS-------HLCLMSPVKPFYQCACPT--GVKLLENG-KTCKDG 310 (318)
T ss_dssp CCCTTTTTGGGCS-------SEEEECSSTTSEEEECST--TCCBCTTS-SCBCC-
T ss_pred cccccccCCCCcc-------eEEecCCCCCCeEEECCC--CCEECCCC-CCCCCC
Confidence 4688988888898 78998876 79999999 99999999 888764
No 126
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=91.83 E-value=0.092 Score=38.28 Aligned_cols=31 Identities=26% Similarity=0.750 Sum_probs=23.3
Q ss_pred CCCCCCcCCCccccc--cCCCceeeeeCCCCCeeEeCCCcccccc
Q 006839 426 GGCWQDKTANVTACK--DTFRGRVCECPLVDGVQFKGDGYSHCEV 468 (629)
Q Consensus 426 ~~C~~~~~~~~~~C~--n~~g~~~C~C~~~~G~~~~~dg~~~C~~ 468 (629)
.+|. |+++|. +..++|.|.|++ || . | ..|+.
T Consensus 12 ~pC~-----nGG~C~~~~~~~~~~C~C~~--Gy--t--G-~~Ce~ 44 (53)
T 1nql_B 12 GYCL-----HDGVCMYIEALDKYACNCVV--GY--I--G-ERCQY 44 (53)
T ss_dssp CEEC-----TTCEEEEETTTTEEEEEECT--TE--E--S-TTSCE
T ss_pred CCCC-----CCeEEeeecCCCCEEEecCC--CC--c--C-CCCCc
Confidence 3476 779998 778899999999 55 4 4 44763
No 127
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=91.80 E-value=0.18 Score=56.52 Aligned_cols=60 Identities=15% Similarity=0.231 Sum_probs=49.2
Q ss_pred CcEEEEeCCCcCHHHHHHHHHHcCCcEEEEEECCCCCceecCCCCCccccccccCcccccEEEEeHHHHHHHHHHHcCC
Q 006839 96 PNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSALIDKSFGETLKKALSGG 174 (629)
Q Consensus 96 ~~i~Lv~RG~C~F~~K~~nAq~aGA~avII~n~~~~~~~~m~~~~~~~~~~~~~~~i~IP~~~I~~~~G~~l~~~l~~~ 174 (629)
++|+|.+|+ |..|..+++.+||.++|++++..+. .....||+++|+..+|..|+.++...
T Consensus 282 gkivl~~~~---~~~~~~~~~~~Ga~gvi~~~~~~~~----------------~~~~~lP~~~v~~~~g~~i~~~~~~~ 341 (621)
T 3vta_A 282 GKIVVCEAS---FGPHEFFKSLDGAAGVLMTSNTRDY----------------ADSYPLPSSVLDPNDLLATLRYIYSI 341 (621)
T ss_dssp TSEEECSSC---CCHHHHHHHHTTCSEEEEECSCCSS----------------CCCCSSSEEEECHHHHHHHHHHHHHH
T ss_pred ceEEEEecC---CChhHHhhhhcceeEEEEEecCCCc----------------ccccccceEEECHHHHHHHHHHHhcc
Confidence 899998764 6789999999999999999875321 11346999999999999999988754
No 128
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=91.78 E-value=0.14 Score=56.08 Aligned_cols=48 Identities=23% Similarity=0.396 Sum_probs=32.2
Q ss_pred Ccee-eCCCCcccCCccCCCCCCCCCCCCCCCCCCCceeeC----CCceeEecCCCCc
Q 006839 499 NGKC-QCPPGFKGDGVKSCVDIDECKERKACQCSECSCKDT----WGSYECTCSGDLL 551 (629)
Q Consensus 499 ~~~C-~C~~Gf~g~~~~~C~dideC~~~~~C~~~~~~C~nt----~Gsy~C~C~~G~~ 551 (629)
++.| .|++||.|.. |.+.+.|..- .|. +.++|.+. ..++.|.|++||.
T Consensus 417 G~~C~~C~~Gy~G~~---c~~~~~C~~C-~C~-~~gtc~~~~~Cd~~tg~C~C~~g~~ 469 (525)
T 4aqs_A 417 GERCDVCKEGFYDLS---AEDPYGCKSC-ACN-PLGTIPGGNPCDSETGYCYCKRLVT 469 (525)
T ss_dssp TTTTCEECTTEECCC---TTSTTSSEEC-CCC-TTTBCCSSCCBCTTTCCBCBCTTCC
T ss_pred CCcccCCCCCCcCCC---CCCCCCCccC-CCC-CCceecCCCcccCCCCEEECCCCCc
Confidence 6667 6888888766 6666667654 454 44444432 2456899999996
No 129
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=91.61 E-value=0.073 Score=59.68 Aligned_cols=42 Identities=36% Similarity=0.820 Sum_probs=37.7
Q ss_pred CcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCcccccc
Q 006839 417 ETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEV 468 (629)
Q Consensus 417 d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~ 468 (629)
..|+|...+++|. +.|.+++++|.|.|+. ||.+..|+ ++|..
T Consensus 577 ~~~~C~~~ng~C~-------~~C~~~~~~~~C~C~~--g~~l~~d~-~~C~~ 618 (619)
T 3s94_A 577 GSNPCAEENGGCS-------HLCLYRPQGLRCACPI--GFELISDM-KTCIV 618 (619)
T ss_dssp CCCGGGSGGGGCS-------SEEEEETTEEEEECCT--TCEECSST-TCEEC
T ss_pred ccccCCCCCCChh-------HhhccCCCCeEEECCC--CCEECCCC-CcCCC
Confidence 5789988888998 8999999999999999 99999999 88863
No 130
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=91.17 E-value=0.19 Score=45.87 Aligned_cols=18 Identities=28% Similarity=0.671 Sum_probs=12.6
Q ss_pred CccccccCC--Cceee-eeCC
Q 006839 435 NVTACKDTF--RGRVC-ECPL 452 (629)
Q Consensus 435 ~~~~C~n~~--g~~~C-~C~~ 452 (629)
+++.|.... +.+.| .|++
T Consensus 5 ~~g~C~~~~~~g~~~C~~C~~ 25 (162)
T 1klo_A 5 GGSSCAIVPKTKEVVCTHCPT 25 (162)
T ss_dssp TTCCEEECSSSCCEEECSCCT
T ss_pred CcCcccccCCCCCEEeCCCCC
Confidence 567786654 56788 6888
No 131
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=90.91 E-value=0.21 Score=40.22 Aligned_cols=69 Identities=26% Similarity=0.472 Sum_probs=50.9
Q ss_pred ccceeeeCC--CceeeCCCCcccCCccCCCCCC--CCCCC-CCCCCCCCceeeCC-CceeEecCCCCccc-CCCCccc
Q 006839 490 TYSACLDSE--NGKCQCPPGFKGDGVKSCVDID--ECKER-KACQCSECSCKDTW-GSYECTCSGDLLYI-RDHDTCI 560 (629)
Q Consensus 490 ~~~~C~~~~--~~~C~C~~Gf~g~~~~~C~did--eC~~~-~~C~~~~~~C~nt~-Gsy~C~C~~G~~~~-~~g~~C~ 560 (629)
.+|.|.... .-.|+|..||.-++.+ |..-+ .|..+ +.|. +++.|.... ..-.|.|...+... .+|..|.
T Consensus 14 ~NA~Cyr~~dg~EecRCllnykk~~~k-CV~~~~~~C~~NNGGCd-~nA~C~~~~~~kIvC~C~~~~~~~~~~gvf~~ 89 (95)
T 1b9w_A 14 ENAACYRYLDGTEEWRCLLYFKEDAGK-CVPAPNMTCKDKNGGCA-PEAECKMNDKNEIVCKCTKEGSEPLFEGVFCS 89 (95)
T ss_dssp TTEEEEECTTSCEEEEECTTEEEETTE-EEECTTCCTTTGGGGSC-TTSEEEECTTSCEEEECCSTTEEEEGGGTEEE
T ss_pred CCcCeEEEcCCCEEEEEECCeEecCCE-EEcCCCCCccccCCCcC-CCcceeecCCCcEEEECCCCCCCcceeeEEec
Confidence 348897754 7789999999966544 86433 68877 8899 899999888 78999999986421 3444443
No 132
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=90.66 E-value=0.46 Score=38.33 Aligned_cols=63 Identities=24% Similarity=0.398 Sum_probs=49.3
Q ss_pred CccccccC-CCceeeeeCCCCCeeEeCCCccccccCCCCcccCCCCCCCCCCCCCCccceeeeCC--CceeeCCCCcc
Q 006839 435 NVTACKDT-FRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSE--NGKCQCPPGFK 509 (629)
Q Consensus 435 ~~~~C~n~-~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~~~--~~~C~C~~Gf~ 509 (629)
.++.|... .|.-.|.|.. ||...+ ..|..-....|..++++|... |.|.... --.|.|...+.
T Consensus 14 ~NA~Cyr~~dg~EecRCll--nykk~~---~kCV~~~~~~C~~NNGGCd~n-------A~C~~~~~~kIvC~C~~~~~ 79 (95)
T 1b9w_A 14 ENAACYRYLDGTEEWRCLL--YFKEDA---GKCVPAPNMTCKDKNGGCAPE-------AECKMNDKNEIVCKCTKEGS 79 (95)
T ss_dssp TTEEEEECTTSCEEEEECT--TEEEET---TEEEECTTCCTTTGGGGSCTT-------SEEEECTTSCEEEECCSTTE
T ss_pred CCcCeEEEcCCCEEEEEEC--CeEecC---CEEEcCCCCCccccCCCcCCC-------cceeecCCCcEEEECCCCCC
Confidence 45899886 4778899999 887754 459865335899999999887 9998766 77899998764
No 133
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=90.22 E-value=0.11 Score=38.67 Aligned_cols=32 Identities=22% Similarity=0.604 Sum_probs=25.3
Q ss_pred CCCCCCCceee----CCCceeEecCCCCcccCCCCcccccc
Q 006839 527 ACQCSECSCKD----TWGSYECTCSGDLLYIRDHDTCISKT 563 (629)
Q Consensus 527 ~C~~~~~~C~n----t~Gsy~C~C~~G~~~~~~g~~C~~~~ 563 (629)
+|. ++++|+. ..++|.|.|++||. |..|....
T Consensus 15 pC~-NGGtC~~~~~~~~~~~~C~C~~Gf~----G~~Ce~~~ 50 (58)
T 3ltf_D 15 YCL-NDAHCFAVKIADLPVYSCECAIGFM----GQRCEYKE 50 (58)
T ss_dssp TSC-SSCEEEEEEETTEEEEEEEECTTEE----SSSSCEEC
T ss_pred cCC-CCCEEeCCccCCCCCEEeECCCCCc----cCCCcccC
Confidence 688 8899983 45689999999997 67787643
No 134
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=89.64 E-value=0.17 Score=53.20 Aligned_cols=113 Identities=15% Similarity=0.237 Sum_probs=29.0
Q ss_pred eeEecCeeeeccccCCceeeeccCCCccCCCCccccCCCcccccCCC--CCCCCCcCCCcccc-ccCCCceeee-eCCCC
Q 006839 379 TLVVNNRQYRGKLEKGAVLKAICSGFEETTEPAVCLSGETNECLDNN--GGCWQDKTANVTAC-KDTFRGRVCE-CPLVD 454 (629)
Q Consensus 379 ~v~in~~~~~c~~~~~~~~c~cc~Gf~~~~~~~~C~~~d~deC~~~~--~~C~~~~~~~~~~C-~n~~g~~~C~-C~~~~ 454 (629)
....|+-.-.|....+.+.|.|..++ .|..|+ .|...- .++. ++..| ......+.|. |.-
T Consensus 296 ~C~CnGHas~C~~~~g~~~C~C~~~t----tG~~CE-----~C~pgy~~~P~~-----~gt~~p~~~g~~~~C~pC~C-- 359 (426)
T 3zyj_B 296 RCKCNLHATVCVYDNSKLTCECEHNT----TGPDCG-----KCKKNYQGRPWS-----PGSYLPIPKGAANACIPSIS-- 359 (426)
T ss_dssp EECCSSSCSCEEEETTEEEECCCTTE----ESSSSC-----EECTTCCSSCCC-----CCBCCSSSSCBCCCCCCCCC--
T ss_pred cCcCCCchhhcCCCCCCceeeCCCCC----cCCCcc-----ccccccccCccc-----CCcccccCCCCCCcccCCCC--
Confidence 34445554566666666788877777 566676 454431 1232 21211 2222334453 222
Q ss_pred CeeEeCCCccccccCCCCcccCCCCCCCCCCCCCCccceeeeCCCceeeCCCCcccCCccCCCCCCCCCCCCCCCCCCCc
Q 006839 455 GVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSENGKCQCPPGFKGDGVKSCVDIDECKERKACQCSECS 534 (629)
Q Consensus 455 G~~~~~dg~~~C~~~~~~~C~~~~~~C~~~~~~~~~~~~C~~~~~~~C~C~~Gf~g~~~~~C~dideC~~~~~C~~~~~~ 534 (629)
+ . .+ ..|. ...++|.+. ++|.+.. .|.|++||.|.. |+. . .|. ++++
T Consensus 360 n--~--~g-~~CD--------~~t~~C~ng-------g~C~~~~--~C~C~~G~~G~~---Ce~------c-~C~-~~g~ 406 (426)
T 3zyj_B 360 S--I--GT-NVCD--------NELLHCQNG-------GTCHNNV--RCLCPAAYTGIL---CEK------L-RCE-EAGS 406 (426)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred C--C--Cc-Cccc--------cCcccCCCC-------CCcCCCC--CCcCCCCCcCCC---CcC------C-CCC-CCCc
Confidence 1 1 12 3353 223455544 5676554 899999999976 542 1 455 4556
Q ss_pred eeeCCC
Q 006839 535 CKDTWG 540 (629)
Q Consensus 535 C~nt~G 540 (629)
|....|
T Consensus 407 C~~~~G 412 (426)
T 3zyj_B 407 CGSDSG 412 (426)
T ss_dssp ------
T ss_pred ccCCCC
Confidence 655444
No 135
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=89.62 E-value=0.16 Score=55.91 Aligned_cols=37 Identities=24% Similarity=0.662 Sum_probs=29.7
Q ss_pred cccccCCCCCCCCCcCCCcccccc-CCCceeeeeC-CCCCeeEeCCCcccccc
Q 006839 418 TNECLDNNGGCWQDKTANVTACKD-TFRGRVCECP-LVDGVQFKGDGYSHCEV 468 (629)
Q Consensus 418 ~deC~~~~~~C~~~~~~~~~~C~n-~~g~~~C~C~-~~~G~~~~~dg~~~C~~ 468 (629)
+|+|..+| |. |++.|.+ ..++|.|.|+ + ||. | +.|+.
T Consensus 2 ~d~C~~~P--C~-----ngG~C~~~~~~~y~C~C~~~--G~~----G-~~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYP--CQ-----HQGICVRFGLDRYQCDCTRT--GYS----G-PNCTI 40 (553)
T ss_dssp CCGGGGCC--CC-----TTCEEEEETTTEEEEECTTS--SEE----T-TTTCE
T ss_pred CCcCCCCC--CC-----CCCCcCCCCCCceEeeCCCC--CcC----C-CCCCC
Confidence 57887766 98 7799999 8999999999 8 554 4 55874
No 136
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=89.12 E-value=0.26 Score=51.91 Aligned_cols=83 Identities=22% Similarity=0.458 Sum_probs=25.0
Q ss_pred cccccCCCceeeeeCCCCCeeEeCCCccccccCCCCcccCCC--CCCCCCCCCCCcccee--eeCC-Cceee-CCCCccc
Q 006839 437 TACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINN--GGCWHESKDGHTYSAC--LDSE-NGKCQ-CPPGFKG 510 (629)
Q Consensus 437 ~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~~~~~~~C~~~~--~~C~~~~~~~~~~~~C--~~~~-~~~C~-C~~Gf~g 510 (629)
..|....+++.|.|+. | +.|.. |+ .|...- .++.. +.+ .... .+.|. |+-++.+
T Consensus 304 s~C~~~~g~~~C~C~~--~--ttG~~---CE-----~C~pgy~~~P~~~--------gt~~p~~~g~~~~C~pC~Cn~~g 363 (426)
T 3zyj_B 304 TVCVYDNSKLTCECEH--N--TTGPD---CG-----KCKKNYQGRPWSP--------GSYLPIPKGAANACIPSISSIGT 363 (426)
T ss_dssp SCEEEETTEEEECCCT--T--EESSS---SC-----EECTTCCSSCCCC--------CBCCSSSSCBCCCCCCCCC----
T ss_pred hhcCCCCCCceeeCCC--C--CcCCC---cc-----ccccccccCcccC--------CcccccCCCCCCcccCCCCCCCc
Confidence 4677777789999999 4 45444 64 344321 12221 111 1222 45553 3333333
Q ss_pred CCccCCCCCCCCCCC-CCCCCCCCceeeCCCceeEecCCCCcc
Q 006839 511 DGVKSCVDIDECKER-KACQCSECSCKDTWGSYECTCSGDLLY 552 (629)
Q Consensus 511 ~~~~~C~dideC~~~-~~C~~~~~~C~nt~Gsy~C~C~~G~~~ 552 (629)
.. | ... ++|. ++++|.+.. +|.|++||.+
T Consensus 364 ~~---C------D~~t~~C~-ngg~C~~~~---~C~C~~G~~G 393 (426)
T 3zyj_B 364 NV---C------DNELLHCQ-NGGTCHNNV---RCLCPAAYTG 393 (426)
T ss_dssp -------------------------------------------
T ss_pred Cc---c------ccCcccCC-CCCCcCCCC---CCcCCCCCcC
Confidence 32 5 322 5787 888998765 9999999985
No 137
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=88.28 E-value=0.34 Score=46.42 Aligned_cols=88 Identities=27% Similarity=0.581 Sum_probs=51.3
Q ss_pred eeeccCCCccCCCCccccCCCc---------ccccCC--CCCCCCCcCCCccccccCCCceeeeeCCCCCe----eEeCC
Q 006839 397 LKAICSGFEETTEPAVCLSGET---------NECLDN--NGGCWQDKTANVTACKDTFRGRVCECPLVDGV----QFKGD 461 (629)
Q Consensus 397 ~c~cc~Gf~~~~~~~~C~~~d~---------deC~~~--~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~----~~~~d 461 (629)
.|.|.+|| .+..|+- +. ..|... ...|. +++.|.+ ..|.|.+ |+ .|.|.
T Consensus 108 ~C~C~~G~----~G~~Cec-~~~~~~~~~~~~~C~~~~~~~~Cs-----g~G~C~~----g~C~C~~--gw~~~~~~~G~ 171 (217)
T 2p28_B 108 ICRCDTGY----IGKNCEC-QTQGRSSQELEGSCRKDNNSIICS-----GLGDCVC----GQCLCHT--SDVPGKLIYGQ 171 (217)
T ss_dssp EEEECTTE----ESTTSCE-ECCCCC-GGGGGGGBSSTTSCBGG-----GTEEEET----TEEEECC--CCSTTCCEEST
T ss_pred EEECCCCc----cCCcccc-cCcccccccCCCcCCCCCCCCCCC-----CCCEEeC----CceECCC--CCCCcccEECC
Confidence 57788888 4555652 11 135432 23465 6689985 3799999 63 14544
Q ss_pred CccccccCCCCcccCCCC-CCCCCCCCCCccceeeeCCCceeeCCCCcccCC
Q 006839 462 GYSHCEVSGPGKCKINNG-GCWHESKDGHTYSACLDSENGKCQCPPGFKGDG 512 (629)
Q Consensus 462 g~~~C~~~~~~~C~~~~~-~C~~~~~~~~~~~~C~~~~~~~C~C~~Gf~g~~ 512 (629)
.|+-. .+.|....+ .|... .++.|.. ..|.|.+||.|..
T Consensus 172 ---~Ce~~-~~~C~~~~g~~C~~~-----~~G~C~~---g~C~C~~G~~G~~ 211 (217)
T 2p28_B 172 ---YCECD-TINCERYNGQVCGGP-----GRGLCFC---GKCRCHPGFEGSA 211 (217)
T ss_dssp ---TSCEE-SSCSCEETTEETTCT-----TTEEEET---TEEEECTTEESTT
T ss_pred ---CcccC-CccCCCCCCCCCCCC-----CCcEEeC---CeeECCCCCccCC
Confidence 48621 256654311 24321 1166764 4899999999986
No 138
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=86.90 E-value=0.69 Score=39.92 Aligned_cols=51 Identities=29% Similarity=0.637 Sum_probs=32.6
Q ss_pred ceeeeC---CCc-eeeCCCCcccCCccCCC-CCC-CCCCCCCCCCCCCceeeCCCceeEecCCCCcccCCCCcccc
Q 006839 492 SACLDS---ENG-KCQCPPGFKGDGVKSCV-DID-ECKERKACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCIS 561 (629)
Q Consensus 492 ~~C~~~---~~~-~C~C~~Gf~g~~~~~C~-did-eC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~~ 561 (629)
++|.+. .++ .|.|++||.|.. |+ +++ +|... ...+|++.|..++. |..|..
T Consensus 7 gtC~~~~~~~~~~~C~Cp~g~~G~~---Ce~~~~~~C~~g------------~G~~YrG~~~~t~s----G~~Cq~ 63 (122)
T 2fd6_A 7 GTCVSNKYFSNIHWCNCPKKFGGQH---CEIDKSKTCYEG------------NGHFYRGKASTDTM----GRPCLP 63 (122)
T ss_dssp CEEEECTTTTTCEEEECCTTEESTT---SCEESSCCSBCS------------SCTTCCSCCCBBTT----SCBBCC
T ss_pred CCcCCCcccCCCCCccCCCCCCCcc---ccccCcCCCccc------------ccccceeecccccc----CCcccC
Confidence 679876 255 999999999976 75 332 33321 12357777776653 566665
No 139
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=86.57 E-value=0.32 Score=35.13 Aligned_cols=23 Identities=30% Similarity=0.808 Sum_probs=18.6
Q ss_pred ceeee----CC-CceeeCCCCcccCCccCCC
Q 006839 492 SACLD----SE-NGKCQCPPGFKGDGVKSCV 517 (629)
Q Consensus 492 ~~C~~----~~-~~~C~C~~Gf~g~~~~~C~ 517 (629)
++|++ .. +|.|.|++||.|.. |+
T Consensus 20 GtC~~~~~~~~~~y~C~C~~Gf~G~~---Ce 47 (52)
T 3ca7_A 20 AHCFAVKIADLPVYSCECAIGFMGQR---CE 47 (52)
T ss_dssp CEEEEEEETTEEEEEEECCTTEESTT---SC
T ss_pred CEEecCccCCCCCEEEECCCCCcCCC---Cc
Confidence 67876 34 89999999999986 75
No 140
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=86.00 E-value=0.25 Score=44.38 Aligned_cols=35 Identities=23% Similarity=0.686 Sum_probs=28.4
Q ss_pred CCCCCCCCCCCCCceeeCCCceeEecCCCCcccCCCCcccc
Q 006839 521 ECKERKACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCIS 561 (629)
Q Consensus 521 eC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~~ 561 (629)
+|... +|. +++.|.+..++|.|.|.+||. |..|..
T Consensus 121 ~~~~~-pc~-~~g~C~~~~~~~~c~C~~g~~----g~~Ce~ 155 (157)
T 1g1t_A 121 ACTNT-SCS-GHGECVETINNYTCKCDPGFS----GLKCEQ 155 (157)
T ss_dssp CCCTT-GGG-GSEEEEEETTEEEEEECTTEE----STTSCE
T ss_pred CCCCC-CCC-CCCEeecCCCCeeEECCCCcc----Cccccc
Confidence 45444 787 779999999999999999997 667754
No 141
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=85.96 E-value=0.34 Score=53.45 Aligned_cols=37 Identities=32% Similarity=0.784 Sum_probs=28.2
Q ss_pred cccccCCCCCCCCCcCCCcccccc-CCCceeeeeC-CCCCeeEeCCCcccccc
Q 006839 418 TNECLDNNGGCWQDKTANVTACKD-TFRGRVCECP-LVDGVQFKGDGYSHCEV 468 (629)
Q Consensus 418 ~deC~~~~~~C~~~~~~~~~~C~n-~~g~~~C~C~-~~~G~~~~~dg~~~C~~ 468 (629)
+|+|..+| |. |++.|.+ ..++|.|.|+ + || . | ..|+.
T Consensus 1 vd~C~s~P--C~-----ngG~C~~~~~~~y~C~C~~~--G~--~--G-~~Ce~ 39 (587)
T 3nt1_A 1 ANPCCSNP--CQ-----NRGECMSTGFDQYKCDCTRT--GF--Y--G-ENCTT 39 (587)
T ss_dssp CCTTTTCC--CC-----TTCEEEEEETTEEEEECTTS--SE--E--T-TTTCE
T ss_pred CCCCCCCC--CC-----CCCEeeCCCCCCeEEecCCC--Cc--c--C-CCCCC
Confidence 47887655 87 7799996 4689999999 9 55 4 4 55875
No 142
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=85.80 E-value=0.33 Score=44.03 Aligned_cols=30 Identities=23% Similarity=0.575 Sum_probs=23.2
Q ss_pred ceeeeCC-CceeeCCCCcccCCccCCCCCCCCCC
Q 006839 492 SACLDSE-NGKCQCPPGFKGDGVKSCVDIDECKE 524 (629)
Q Consensus 492 ~~C~~~~-~~~C~C~~Gf~g~~~~~C~dideC~~ 524 (629)
+.|.+.. +|.|.|++||.|+. |+.+.+|..
T Consensus 131 g~C~~~~~~~~c~C~~g~~g~~---C~~~~~c~~ 161 (164)
T 3cfw_A 131 GECVEIINNYTCNCDVGYYGPQ---CQFVQVDPR 161 (164)
T ss_dssp EEEEEETTEEEEEECTTCBSSS---SCBC-----
T ss_pred CeecccCCCceeeeCCCccccc---ccccccCcc
Confidence 8899888 99999999999986 998888853
No 143
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=84.33 E-value=1.1 Score=31.95 Aligned_cols=39 Identities=18% Similarity=0.567 Sum_probs=27.2
Q ss_pred CCCCCCCCCC--CCCCCCCCcee--eCCCceeEecCCCCcccCCCCccc
Q 006839 516 CVDIDECKER--KACQCSECSCK--DTWGSYECTCSGDLLYIRDHDTCI 560 (629)
Q Consensus 516 C~dideC~~~--~~C~~~~~~C~--nt~Gsy~C~C~~G~~~~~~g~~C~ 560 (629)
+...++|... +.|. + ++|. ...+.+.|.|+.||. |..|.
T Consensus 6 ~~~~~~C~~~~~~yC~-n-G~C~~i~~~~~~~C~C~~gy~----G~RCe 48 (50)
T 2rnl_A 6 SGKKNPCNAEFQNFCI-H-GECKYIEHLEAVTCKCQQEYF----GERCG 48 (50)
T ss_dssp CSCCCTTTTTGGGTCS-S-SEEEEETTTTEEEEECCSSCC----SSSCC
T ss_pred CCcCcccCchhhCcCC-C-CEEEEecCCCCeeEECCCCcc----ccccc
Confidence 3345566643 5787 5 5997 556789999999997 55564
No 144
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=83.63 E-value=0.81 Score=48.20 Aligned_cols=40 Identities=25% Similarity=0.782 Sum_probs=32.1
Q ss_pred CC-CCCCCCCCCCCCCCCCceeeCCCceeEecCC-CCcccCCCCcccc
Q 006839 516 CV-DIDECKERKACQCSECSCKDTWGSYECTCSG-DLLYIRDHDTCIS 561 (629)
Q Consensus 516 C~-dideC~~~~~C~~~~~~C~nt~Gsy~C~C~~-G~~~~~~g~~C~~ 561 (629)
|. ..++|... +|. ++++|.+.+++|.|.|+. ||. |..|..
T Consensus 181 C~~~~~~C~~~-pC~-n~g~C~~~~~~~~C~C~~~~~~----G~~C~~ 222 (410)
T 3asi_A 181 CEGPSTTCQED-SCS-NQGVCLQQWDGFSCDCSMTSFS----GPLCND 222 (410)
T ss_dssp CCCCSSCCCTT-SSS-TTCEEEECSSSEEEECTTTSEE----STTSCE
T ss_pred CCCCCCCcccc-cCC-CCCEecCCCCCceEeccCCccc----CCCCCC
Confidence 53 34678776 999 999999999999999996 886 556653
No 145
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=83.44 E-value=0.4 Score=35.52 Aligned_cols=23 Identities=30% Similarity=0.808 Sum_probs=18.5
Q ss_pred ceeee----CC-CceeeCCCCcccCCccCCC
Q 006839 492 SACLD----SE-NGKCQCPPGFKGDGVKSCV 517 (629)
Q Consensus 492 ~~C~~----~~-~~~C~C~~Gf~g~~~~~C~ 517 (629)
++|.. .. +|.|.|++||.|.. |+
T Consensus 20 GtC~~~~~~~~~~~~C~C~~Gf~G~~---Ce 47 (58)
T 3ltf_D 20 AHCFAVKIADLPVYSCECAIGFMGQR---CE 47 (58)
T ss_dssp CEEEEEEETTEEEEEEEECTTEESSS---SC
T ss_pred CEEeCCccCCCCCEEeECCCCCccCC---Cc
Confidence 78973 33 89999999999986 65
No 146
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=83.32 E-value=0.63 Score=42.06 Aligned_cols=31 Identities=19% Similarity=0.589 Sum_probs=26.3
Q ss_pred CCCCCCCceeeCCCceeEecCCCCcccCCCCccccc
Q 006839 527 ACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCISK 562 (629)
Q Consensus 527 ~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~~~ 562 (629)
+|. .+++|.+..++|.|.|.+||. |..|...
T Consensus 126 ~C~-~~g~C~~~~~~~~c~C~~g~~----g~~C~~~ 156 (164)
T 3cfw_A 126 SCS-GHGECVEIINNYTCNCDVGYY----GPQCQFV 156 (164)
T ss_dssp SSC-SSEEEEEETTEEEEEECTTCB----SSSSCBC
T ss_pred cCC-CCCeecccCCCceeeeCCCcc----ccccccc
Confidence 777 779999999999999999997 5567653
No 147
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=82.30 E-value=0.55 Score=37.03 Aligned_cols=36 Identities=22% Similarity=0.576 Sum_probs=24.3
Q ss_pred CCCCCCC--CCCCCCCCcee--eCCCceeEecCCCCcccCCCCccc
Q 006839 519 IDECKER--KACQCSECSCK--DTWGSYECTCSGDLLYIRDHDTCI 560 (629)
Q Consensus 519 ideC~~~--~~C~~~~~~C~--nt~Gsy~C~C~~G~~~~~~g~~C~ 560 (629)
.++|... +.|. ++ +|. ...+.+.|.|.+||. |..|.
T Consensus 37 ~~pC~~~~~~yCl-nG-~C~~i~~~~~~~C~C~~GYt----G~RCE 76 (79)
T 1xdt_R 37 RDPCLRKYKDFCI-HG-ECKYVKELRAPSCICHPGYH----GERCH 76 (79)
T ss_dssp --CTTTTTTTCCS-SE-EECCBGGGTBCCEEECTTEE----STTCC
T ss_pred CCCCCccccCcCC-CC-EeeeecCCCCeEEEcCCCcc----ccccc
Confidence 4566632 5787 55 894 444789999999997 56664
No 148
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=81.76 E-value=0.8 Score=45.37 Aligned_cols=41 Identities=39% Similarity=0.860 Sum_probs=32.7
Q ss_pred CCCCCCCC----CCCCCCCCceeeCCCceeEecCCCCcccCCCCcccc
Q 006839 518 DIDECKER----KACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCIS 561 (629)
Q Consensus 518 dideC~~~----~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~~ 561 (629)
+.++|... ..|. +.|.|..|+|.|.|.+||.+..+...|..
T Consensus 120 ~~~~C~~~~~~~~~c~---~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~ 164 (278)
T 3dem_A 120 DVDECKEREDEELSCD---HYCHNYIGGYYCSCRFGYILHTDNRTCRV 164 (278)
T ss_dssp ECCTTTC-----CCCS---SEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred ccccCCCCCCCcccCC---cCcCCccCCcEEEeCCcceeccCCCCCcc
Confidence 56677643 2677 77999999999999999998888887753
No 149
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=80.20 E-value=0.83 Score=45.56 Aligned_cols=40 Identities=30% Similarity=0.821 Sum_probs=31.4
Q ss_pred CCCCCCCC----CCCCCCCCceeeCCCceeEecCCCCcccCCCCccc
Q 006839 518 DIDECKER----KACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCI 560 (629)
Q Consensus 518 dideC~~~----~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~ 560 (629)
+.++|... ..|. +.|.|+.|+|.|.|.+||.+..++..|.
T Consensus 119 ~~~~C~~~~~~~~~c~---~~C~n~~g~~~csC~~Gy~L~~d~~~C~ 162 (286)
T 1nt0_A 119 DVDECRTSLGDSVPCD---HYCHXYLGGYYCSCRVGYILHQNKHTCS 162 (286)
T ss_dssp ECCTTC-------CCS---SEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred cCCccCCCCCCcccCC---CccccccCceEeecCCCceeccCCCCcc
Confidence 45667543 2477 7899999999999999999988888775
No 150
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=80.02 E-value=1.3 Score=31.73 Aligned_cols=32 Identities=16% Similarity=0.430 Sum_probs=24.0
Q ss_pred CCCCCCCCceeeC--CCceeEecCCCCcccCCCCcccccc
Q 006839 526 KACQCSECSCKDT--WGSYECTCSGDLLYIRDHDTCISKT 563 (629)
Q Consensus 526 ~~C~~~~~~C~nt--~Gsy~C~C~~G~~~~~~g~~C~~~~ 563 (629)
+.|. ++ +|.-. .+.+.|.|++||. |..|....
T Consensus 14 ~yC~-nG-~C~~~~~~~~~~C~C~~gy~----G~RCe~~d 47 (50)
T 3e50_C 14 QFCF-HG-TCRFLVQEDKPACVCHSGYV----GARCEHAD 47 (50)
T ss_pred Cccc-CC-EEeeccCCCCeEEECCCCCc----ccCCCcee
Confidence 5787 65 99753 4789999999997 66776543
No 151
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=78.22 E-value=1 Score=32.18 Aligned_cols=31 Identities=16% Similarity=0.449 Sum_probs=23.7
Q ss_pred CCCCCCCCcee--eCCCceeEecCCCCcccCCCCccccc
Q 006839 526 KACQCSECSCK--DTWGSYECTCSGDLLYIRDHDTCISK 562 (629)
Q Consensus 526 ~~C~~~~~~C~--nt~Gsy~C~C~~G~~~~~~g~~C~~~ 562 (629)
+.|. + ++|. ...+.+.|.|++||. |..|...
T Consensus 14 ~yC~-n-G~C~~~~~~~~~~C~C~~gy~----G~RCe~~ 46 (50)
T 1iox_A 14 HYCI-K-GRCRFVVAEQTPSCVCDEGYI----GARCERV 46 (50)
T ss_dssp TSCT-T-CCEEEETTTTEEEECCCTTEE----TTTTCEE
T ss_pred Cccc-C-CEEEeEcCCCCeEEECCCCcc----cCCCCee
Confidence 4677 5 6886 556789999999997 6777654
No 152
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=75.66 E-value=1.6 Score=37.52 Aligned_cols=25 Identities=16% Similarity=0.397 Sum_probs=20.5
Q ss_pred CCCCCCCceeeCC--Cce-eEecCCCCcc
Q 006839 527 ACQCSECSCKDTW--GSY-ECTCSGDLLY 552 (629)
Q Consensus 527 ~C~~~~~~C~nt~--Gsy-~C~C~~G~~~ 552 (629)
+|. ++++|++.. .+| .|.|++||.+
T Consensus 2 pC~-nggtC~~~~~~~~~~~C~Cp~g~~G 29 (122)
T 2fd6_A 2 DCL-NGGTCVSNKYFSNIHWCNCPKKFGG 29 (122)
T ss_dssp CCC-SSCEEEECTTTTTCEEEECCTTEES
T ss_pred CCC-CcCCcCCCcccCCCCCccCCCCCCC
Confidence 577 889999884 566 9999999973
No 153
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=74.42 E-value=1.9 Score=30.80 Aligned_cols=26 Identities=27% Similarity=0.649 Sum_probs=19.4
Q ss_pred ceeeeCC---CceeeCCCCcccCCccCCCCCC
Q 006839 492 SACLDSE---NGKCQCPPGFKGDGVKSCVDID 520 (629)
Q Consensus 492 ~~C~~~~---~~~C~C~~Gf~g~~~~~C~did 520 (629)
++|.... .+.|.|++||.|.. |+-.|
T Consensus 19 G~C~~~~~~~~~~C~C~~gy~G~R---Ce~~d 47 (50)
T 3e50_C 19 GTCRFLVQEDKPACVCHSGYVGAR---CEHAD 47 (50)
T ss_pred CEEeeccCCCCeEEECCCCCcccC---CCcee
Confidence 4686432 78999999999987 76443
No 154
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=69.61 E-value=1.7 Score=38.74 Aligned_cols=36 Identities=28% Similarity=0.717 Sum_probs=26.4
Q ss_pred CccccCCCcccccCCCCCCCCCcCCCccccccCCCceeeeeCCCCCee
Q 006839 410 PAVCLSGETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQ 457 (629)
Q Consensus 410 ~~~C~~~d~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~ 457 (629)
+.+|+ .++|... +|. +++.|.+..++|.|.|.+ ||.
T Consensus 114 ~fICe---~~~~~~~--pc~-----~~g~C~~~~~~~~c~C~~--g~~ 149 (157)
T 1g1t_A 114 LALCY---TAACTNT--SCS-----GHGECVETINNYTCKCDP--GFS 149 (157)
T ss_dssp EEEEE---ECCCCTT--GGG-----GSEEEEEETTEEEEEECT--TEE
T ss_pred ceEeC---cCCCCCC--CCC-----CCCEeecCCCCeeEECCC--Ccc
Confidence 44565 4566543 376 559999999999999999 554
No 155
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=68.34 E-value=3.1 Score=44.73 Aligned_cols=40 Identities=20% Similarity=0.415 Sum_probs=30.1
Q ss_pred CCCCCCCC--CCCCCCCCceeeCC-CceeEecCCCCcccCCCCccc
Q 006839 518 DIDECKER--KACQCSECSCKDTW-GSYECTCSGDLLYIRDHDTCI 560 (629)
Q Consensus 518 dideC~~~--~~C~~~~~~C~nt~-Gsy~C~C~~G~~~~~~g~~C~ 560 (629)
.++.|..+ ++|+ .++.|+.+. |.|.|.|+.||.+ +|..|.
T Consensus 17 ~~~~c~~~~~~~c~-~~a~C~~~~~~~~~c~C~~G~ag--~G~~c~ 59 (551)
T 3fby_A 17 AQRFCPDGSPSECH-EHADCVLERDGSRSCVCAVGWAG--NGILCG 59 (551)
T ss_dssp BCCBCTTSSBCCCC-TTEEEEECTTSCEEEEECTTEES--SSSSCE
T ss_pred ccccCCCCCCCCCC-CCCeeEeCCCCCEecCCCCCCCC--CCcccC
Confidence 34556554 5899 889999874 7899999999974 555665
No 156
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=63.12 E-value=4.4 Score=49.10 Aligned_cols=41 Identities=32% Similarity=0.879 Sum_probs=33.7
Q ss_pred CCC--CCCCCCCCCCCCCCCCceeeCCCceeEecC-CCCcccCCCCcccc
Q 006839 515 SCV--DIDECKERKACQCSECSCKDTWGSYECTCS-GDLLYIRDHDTCIS 561 (629)
Q Consensus 515 ~C~--dideC~~~~~C~~~~~~C~nt~Gsy~C~C~-~G~~~~~~g~~C~~ 561 (629)
.|. ..+.|.++ +|. +++.|.+.+++|.|.|+ .||. |..|..
T Consensus 613 gC~~~~~~~C~~~-pC~-ngg~C~~~~~~~~C~C~~~g~~----G~~C~~ 656 (1245)
T 3qcw_A 613 SCSRETAKPCLSN-PCK-NNGMCRDGWNRYVCDCSGTGYL----GRSCER 656 (1245)
T ss_dssp SCCCCSSCGGGSC-CCC-TTCEEEECSSSEEEECTTTTEE----STTSCE
T ss_pred cccccCCCCCCcc-CCC-CCCEEeCCCCCeEEECCCCCcc----cccCcc
Confidence 475 35789887 999 99999999999999999 6986 666753
No 157
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=61.55 E-value=4.8 Score=42.15 Aligned_cols=37 Identities=24% Similarity=0.749 Sum_probs=26.7
Q ss_pred cccccCCCCCCCCCcCCCccccccCCCceeeeeC-CCCCeeEeCCCcccccc
Q 006839 418 TNECLDNNGGCWQDKTANVTACKDTFRGRVCECP-LVDGVQFKGDGYSHCEV 468 (629)
Q Consensus 418 ~deC~~~~~~C~~~~~~~~~~C~n~~g~~~C~C~-~~~G~~~~~dg~~~C~~ 468 (629)
.++|...+ |. +++.|.+..++|.|.|+ + || . | ..|+.
T Consensus 185 ~~~C~~~p--C~-----n~g~C~~~~~~~~C~C~~~--~~--~--G-~~C~~ 222 (410)
T 3asi_A 185 STTCQEDS--CS-----NQGVCLQQWDGFSCDCSMT--SF--S--G-PLCND 222 (410)
T ss_dssp SSCCCTTS--SS-----TTCEEEECSSSEEEECTTT--SE--E--S-TTSCE
T ss_pred CCCccccc--CC-----CCCEecCCCCCceEeccCC--cc--c--C-CCCCC
Confidence 45675544 87 77999999999999998 4 44 3 3 45764
No 158
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=61.26 E-value=3.7 Score=40.70 Aligned_cols=41 Identities=22% Similarity=0.583 Sum_probs=30.6
Q ss_pred CcccccCCC---CCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccc
Q 006839 417 ETNECLDNN---GGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCE 467 (629)
Q Consensus 417 d~deC~~~~---~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~ 467 (629)
+.++|...+ ..|. +.|.|+.|+|.|.|.+ ||.+..++ +.|.
T Consensus 119 ~~~~C~~~~~~~~~c~-------~~C~n~~g~~~csC~~--Gy~L~~d~-~~C~ 162 (286)
T 1nt0_A 119 DVDECRTSLGDSVPCD-------HYCHXYLGGYYCSCRV--GYILHQNK-HTCS 162 (286)
T ss_dssp ECCTTC-------CCS-------SEEEEETTEEEEECCT--TEEECTTS-SCEE
T ss_pred cCCccCCCCCCcccCC-------CccccccCceEeecCC--CceeccCC-CCcc
Confidence 445665432 2487 7899999999999999 99999888 7776
No 159
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=61.16 E-value=5.4 Score=48.29 Aligned_cols=41 Identities=24% Similarity=0.786 Sum_probs=33.6
Q ss_pred CCC-CCCCCCCCCCCCCCCCceeeCCCceeEecC-CCCcccCCCCcccc
Q 006839 515 SCV-DIDECKERKACQCSECSCKDTWGSYECTCS-GDLLYIRDHDTCIS 561 (629)
Q Consensus 515 ~C~-dideC~~~~~C~~~~~~C~nt~Gsy~C~C~-~G~~~~~~g~~C~~ 561 (629)
.|. ..+.|..+ +|. ++++|...+.+|.|.|+ +||. |..|..
T Consensus 1012 gC~~~~~~C~~~-pC~-ngG~C~~~~~~~~C~C~~~g~~----G~~C~~ 1054 (1245)
T 3qcw_A 1012 GCEGPSTTCQED-SCS-NQGVCLQQWDGFSCDCSMTSFS----GPLCND 1054 (1245)
T ss_dssp SSSCCCCCCCTT-SSS-SSCEEEEETTEEEEECTTSSCB----STTSCB
T ss_pred eeecccCceECC-cCC-CCCEeCCCCCCCEEECCCCCCC----CCCccC
Confidence 465 45789887 999 99999999999999999 5986 566654
No 160
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=60.00 E-value=4.5 Score=39.83 Aligned_cols=41 Identities=24% Similarity=0.680 Sum_probs=31.4
Q ss_pred CcccccCCC---CCCCCCcCCCccccccCCCceeeeeCCCCCeeEeCCCccccc
Q 006839 417 ETNECLDNN---GGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCE 467 (629)
Q Consensus 417 d~deC~~~~---~~C~~~~~~~~~~C~n~~g~~~C~C~~~~G~~~~~dg~~~C~ 467 (629)
+.++|.... ..|. ..|.|..|++.|.|.+ ||.+..+. +.|.
T Consensus 120 ~~~~C~~~~~~~~~c~-------~~C~n~~g~~~C~C~~--Gy~l~~d~-~~C~ 163 (278)
T 3dem_A 120 DVDECKEREDEELSCD-------HYCHNYIGGYYCSCRF--GYILHTDN-RTCR 163 (278)
T ss_dssp ECCTTTC-----CCCS-------SEEEEETTEEEEECCT--TCEECTTS-SCEE
T ss_pred ccccCCCCCCCcccCC-------cCcCCccCCcEEEeCC--cceeccCC-CCCc
Confidence 455665432 2586 6799999999999999 99999888 7786
No 161
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=56.21 E-value=7.6 Score=27.62 Aligned_cols=21 Identities=19% Similarity=0.514 Sum_probs=16.7
Q ss_pred ceeeeC--C-CceeeCCCCcccCC
Q 006839 492 SACLDS--E-NGKCQCPPGFKGDG 512 (629)
Q Consensus 492 ~~C~~~--~-~~~C~C~~Gf~g~~ 512 (629)
++|... . .+.|.|++||.|..
T Consensus 23 G~C~~i~~~~~~~C~C~~gy~G~R 46 (50)
T 2rnl_A 23 GECKYIEHLEAVTCKCQQEYFGER 46 (50)
T ss_dssp SEEEEETTTTEEEEECCSSCCSSS
T ss_pred CEEEEecCCCCeeEECCCCccccc
Confidence 578633 3 78999999999986
No 162
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=56.01 E-value=10 Score=33.49 Aligned_cols=23 Identities=35% Similarity=0.926 Sum_probs=18.1
Q ss_pred ceeeeCC---Cc-eeeCCCCcccCCccCCC
Q 006839 492 SACLDSE---NG-KCQCPPGFKGDGVKSCV 517 (629)
Q Consensus 492 ~~C~~~~---~~-~C~C~~Gf~g~~~~~C~ 517 (629)
++|+... .+ .|.|++||.|.. |+
T Consensus 19 GtC~~~~~~s~~~~C~Cp~g~~G~~---Ce 45 (145)
T 2i9a_A 19 GTCVSNKYFSNIHWCNCPKKFGGQH---CE 45 (145)
T ss_dssp CEEEECSSSTTCEEEECCTTEESTT---SC
T ss_pred CCcCCCccccCCccccCCCCCCCCc---ee
Confidence 7797652 55 899999999876 75
No 163
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=55.92 E-value=1.2e+02 Score=27.70 Aligned_cols=88 Identities=14% Similarity=0.287 Sum_probs=52.4
Q ss_pred hhhhhhcccCCCCcchhhhHHHHhhhCCCCc-ccchHHHHHHHHHH-cCCChhhhccccCCCCCCCCChhhHHHHHhhcC
Q 006839 290 LCVFKVAKESKKPWVWWDYVTDFQIRCPMKD-KKYNKECAAAVIKS-LGLDAKKIEKCMGDPDADADNPVLKEEQDAQVG 367 (629)
Q Consensus 290 ~c~~~~~~~~~~~~~ww~Y~~~f~~~C~~~~-~~~~~~C~~~v~~~-~~ld~~~i~~C~~d~~~d~~n~iL~~~~~~q~~ 367 (629)
.|+++.+.. +||+|....-..=.... .....+=-..+.+. +|+|.+++..|+.+... ...++.+...-.
T Consensus 87 ~a~~~~~~~-----~f~~~~~aLf~~~~~~~~~~~~~~~L~~~a~~~~Gld~~~~~~~l~s~~~---~~~v~~~~~~a~- 157 (202)
T 3gha_A 87 EEVWKEDPD-----SFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETF---ASQVEKDSDLNQ- 157 (202)
T ss_dssp HHHHHHCGG-----GHHHHHHHHHHHCCSSSSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHTTT---HHHHHHHHHHHH-
T ss_pred HHHHhhCHH-----HHHHHHHHHHHhCccccccccCHHHHHHHHHHhcCCCHHHHHHHHhChHH---HHHHHHHHHHHH-
Confidence 466655444 79998876543322111 11223445667788 89999999999854421 223333333222
Q ss_pred CCCCCcceecCeeEecCeeeec
Q 006839 368 KGSRGDVTILPTLVVNNRQYRG 389 (629)
Q Consensus 368 ~~~~~~v~~~P~v~in~~~~~c 389 (629)
+.+|...|++.+||..+.+
T Consensus 158 ---~~gV~gtPtfvvnG~~~~G 176 (202)
T 3gha_A 158 ---KMNIQATPTIYVNDKVIKN 176 (202)
T ss_dssp ---HTTCCSSCEEEETTEECSC
T ss_pred ---HcCCCcCCEEEECCEEecC
Confidence 2347889999999886554
No 164
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=54.94 E-value=4.5 Score=28.80 Aligned_cols=23 Identities=30% Similarity=0.769 Sum_probs=17.3
Q ss_pred ceeee--CC-CceeeCCCCcccCCccCCC
Q 006839 492 SACLD--SE-NGKCQCPPGFKGDGVKSCV 517 (629)
Q Consensus 492 ~~C~~--~~-~~~C~C~~Gf~g~~~~~C~ 517 (629)
++|.. .. .+.|.|++||.|.. |+
T Consensus 19 G~C~~~~~~~~~~C~C~~gy~G~R---Ce 44 (50)
T 1iox_A 19 GRCRFVVAEQTPSCVCDEGYIGAR---CE 44 (50)
T ss_dssp CCEEEETTTTEEEECCCTTEETTT---TC
T ss_pred CEEEeEcCCCCeEEECCCCcccCC---CC
Confidence 45742 22 78999999999987 75
No 165
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=53.49 E-value=7.4 Score=35.88 Aligned_cols=32 Identities=22% Similarity=0.660 Sum_probs=24.2
Q ss_pred CCCCCCCCCCCCCceeeCCCceeEecCCCCcccCCCCccccc
Q 006839 521 ECKERKACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCISK 562 (629)
Q Consensus 521 eC~~~~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~~~ 562 (629)
.|.. +|. +++.|+. ..+|.|++||. |..|...
T Consensus 150 ~C~~--~C~-ngG~Cv~---P~~C~C~~Gw~----G~~C~~~ 181 (188)
T 2ygo_A 150 ECPG--GCR-NGGFCNE---RRICECPDGFH----GPHCEGT 181 (188)
T ss_dssp CCTT--CCC-TTCEECT---TSCEECCTTCB----TTTTCBC
T ss_pred ccCC--CCC-CCCEeCC---CCcccCcCCCC----CCCCcCC
Confidence 4553 688 8888874 56899999997 7778764
No 166
>4f87_A Plycb; lysin, bacteriophage, antimicrobial protein, viral protein; 1.40A {Streptococcus phage C1} PDB: 4f88_A
Probab=51.56 E-value=7.8 Score=27.79 Aligned_cols=20 Identities=45% Similarity=0.496 Sum_probs=18.7
Q ss_pred cccEEEEeHHHHHHHHHHHc
Q 006839 153 TIPSALIDKSFGETLKKALS 172 (629)
Q Consensus 153 ~IP~~~I~~~~G~~l~~~l~ 172 (629)
-||++-|+++|-++|+++++
T Consensus 52 iipsinisksdveairkamk 71 (72)
T 4f87_A 52 IIPSINISKSDVEAIRKAMK 71 (72)
T ss_dssp TSCEEECCGGGHHHHHHHHC
T ss_pred hCccccccHhHHHHHHHHhc
Confidence 59999999999999999986
No 167
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=48.06 E-value=1.5e+02 Score=26.34 Aligned_cols=88 Identities=18% Similarity=0.206 Sum_probs=50.3
Q ss_pred hhhhhhcccCCCCcchhhhHHHHhhhCCC-CcccchHHHHHHHHHHcCCChhh---hcccc--CCCCCCCCChhhHHHHH
Q 006839 290 LCVFKVAKESKKPWVWWDYVTDFQIRCPM-KDKKYNKECAAAVIKSLGLDAKK---IEKCM--GDPDADADNPVLKEEQD 363 (629)
Q Consensus 290 ~c~~~~~~~~~~~~~ww~Y~~~f~~~C~~-~~~~~~~~C~~~v~~~~~ld~~~---i~~C~--~d~~~d~~n~iL~~~~~ 363 (629)
+|++++..+ ++|+|....-..=.. .......+=-..+.+.+|+|.++ +..|+ .+... ...++++..
T Consensus 69 ~~a~~~~~~-----~~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~~~---~~~v~~~~~ 140 (186)
T 3bci_A 69 HAVLMYAPK-----SFLDFQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKS---WKAAEKDKK 140 (186)
T ss_dssp HHHHHHCGG-----GHHHHHHHHHHTCCCTTSCCCCHHHHHHHHHTTCCCHHHHHHHHHHHHSTTCHH---HHHHHHHHH
T ss_pred HHHHHhCHH-----HHHHHHHHHHhcCcccCCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhcCHHH---HHHHHHHHH
Confidence 456554333 688887765332111 11122344556788899999998 99997 44321 122333332
Q ss_pred hhcCCCCCCcceecCeeEecCeeeec
Q 006839 364 AQVGKGSRGDVTILPTLVVNNRQYRG 389 (629)
Q Consensus 364 ~q~~~~~~~~v~~~P~v~in~~~~~c 389 (629)
.-. ..+|...|++.+||..+.+
T Consensus 141 ~a~----~~gv~GtPt~vvnG~~~~G 162 (186)
T 3bci_A 141 IAK----DNHIKTTPTAFINGEKVED 162 (186)
T ss_dssp HHH----HTTCCSSSEEEETTEECSC
T ss_pred HHH----HcCCCCCCeEEECCEEcCC
Confidence 211 1347889999999875544
No 168
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=47.07 E-value=12 Score=33.18 Aligned_cols=25 Identities=16% Similarity=0.492 Sum_probs=19.7
Q ss_pred CCCCCCCceeeC--CCce-eEecCCCCcc
Q 006839 527 ACQCSECSCKDT--WGSY-ECTCSGDLLY 552 (629)
Q Consensus 527 ~C~~~~~~C~nt--~Gsy-~C~C~~G~~~ 552 (629)
+|. ++++|+.. ...| .|.|++||.+
T Consensus 14 pC~-NGGtC~~~~~~s~~~~C~Cp~g~~G 41 (145)
T 2i9a_A 14 DCL-NGGTCVSNKYFSNIHWCNCPKKFGG 41 (145)
T ss_dssp CCC-TTCEEEECSSSTTCEEEECCTTEES
T ss_pred CCC-CCCCcCCCccccCCccccCCCCCCC
Confidence 687 88999875 3566 8999999973
No 169
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=46.11 E-value=6.1 Score=43.08 Aligned_cols=15 Identities=20% Similarity=0.638 Sum_probs=12.8
Q ss_pred eCCCceeEecCCCCc
Q 006839 537 DTWGSYECTCSGDLL 551 (629)
Q Consensus 537 nt~Gsy~C~C~~G~~ 551 (629)
...|+|.|.|..||.
T Consensus 305 ~~~Gs~~C~C~ng~~ 319 (536)
T 3fl7_A 305 SPEGATSCECEEGFF 319 (536)
T ss_dssp CCTTCSSCEECTTCB
T ss_pred CCCCccEEEEecccc
Confidence 456999999999985
No 170
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=42.31 E-value=14 Score=28.97 Aligned_cols=37 Identities=30% Similarity=0.780 Sum_probs=21.1
Q ss_pred cccccCC-CCCCCCCcCCCccccc--cCCCceeeeeCCCCCeeEeCCCccccc
Q 006839 418 TNECLDN-NGGCWQDKTANVTACK--DTFRGRVCECPLVDGVQFKGDGYSHCE 467 (629)
Q Consensus 418 ~deC~~~-~~~C~~~~~~~~~~C~--n~~g~~~C~C~~~~G~~~~~dg~~~C~ 467 (629)
.++|... ...|. + +.|. ...+.+.|.|++ || .|.. |+
T Consensus 37 ~~pC~~~~~~yCl-----n-G~C~~i~~~~~~~C~C~~--GY--tG~R---CE 76 (79)
T 1xdt_R 37 RDPCLRKYKDFCI-----H-GECKYVKELRAPSCICHP--GY--HGER---CH 76 (79)
T ss_dssp --CTTTTTTTCCS-----S-EEECCBGGGTBCCEEECT--TE--ESTT---CC
T ss_pred CCCCCccccCcCC-----C-CEeeeecCCCCeEEEcCC--Cc--cccc---cc
Confidence 3455421 23476 4 4784 335788999999 54 5444 75
No 171
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=40.02 E-value=26 Score=37.73 Aligned_cols=31 Identities=26% Similarity=0.819 Sum_probs=24.9
Q ss_pred CCCCCCCCCCCccceeeeCC--CceeeCCCCcccCCccCCC
Q 006839 479 GGCWHESKDGHTYSACLDSE--NGKCQCPPGFKGDGVKSCV 517 (629)
Q Consensus 479 ~~C~~~~~~~~~~~~C~~~~--~~~C~C~~Gf~g~~~~~C~ 517 (629)
++|+.+ +.|+.+. .|.|.|+.||.|++.. |.
T Consensus 27 ~~c~~~-------a~C~~~~~~~~~c~C~~G~ag~G~~-c~ 59 (551)
T 3fby_A 27 SECHEH-------ADCVLERDGSRSCVCAVGWAGNGIL-CG 59 (551)
T ss_dssp CCCCTT-------EEEEECTTSCEEEEECTTEESSSSS-CE
T ss_pred CCCCCC-------CeeEeCCCCCEecCCCCCCCCCCcc-cC
Confidence 467665 9999877 7899999999998854 63
No 172
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=35.86 E-value=20 Score=32.95 Aligned_cols=19 Identities=37% Similarity=0.996 Sum_probs=15.1
Q ss_pred ceeeeCCCceeeCCCCcccCC
Q 006839 492 SACLDSENGKCQCPPGFKGDG 512 (629)
Q Consensus 492 ~~C~~~~~~~C~C~~Gf~g~~ 512 (629)
+.|+. ...|.|++||.|..
T Consensus 159 G~Cv~--P~~C~C~~Gw~G~~ 177 (188)
T 2ygo_A 159 GFCNE--RRICECPDGFHGPH 177 (188)
T ss_dssp CEECT--TSCEECCTTCBTTT
T ss_pred CEeCC--CCcccCcCCCCCCC
Confidence 56754 46899999999976
No 173
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=33.86 E-value=7.7 Score=40.13 Aligned_cols=19 Identities=16% Similarity=0.781 Sum_probs=11.3
Q ss_pred eE-ecCCCCcccCCCCcccc
Q 006839 543 EC-TCSGDLLYIRDHDTCIS 561 (629)
Q Consensus 543 ~C-~C~~G~~~~~~g~~C~~ 561 (629)
.| .|.+||........|.+
T Consensus 347 ~Ce~C~~Gyyg~~~~~~C~p 366 (375)
T 4aqt_A 347 KCERCRENFFRLGNTEACSP 366 (375)
T ss_dssp TSCEECSSEECCTTCSSCEE
T ss_pred CCCCCCcCcccCcCCCCCcC
Confidence 45 57777765555555654
No 174
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=32.19 E-value=9.7 Score=24.33 Aligned_cols=24 Identities=33% Similarity=0.887 Sum_probs=17.0
Q ss_pred ceeeCCCCcccCCccCCCCCCCCC
Q 006839 500 GKCQCPPGFKGDGVKSCVDIDECK 523 (629)
Q Consensus 500 ~~C~C~~Gf~g~~~~~C~dideC~ 523 (629)
..|.|++||.-+....|...++|.
T Consensus 5 ~GC~C~~G~vrn~~G~CV~~~~Cp 28 (32)
T 3ssb_I 5 DKCYCEDGYARDVNGKCIPIKDCP 28 (32)
T ss_dssp EEEEECTTEEECTTSCEEEGGGCC
T ss_pred CCCCcCCCcEECCCCCEECHHHCc
Confidence 358999999866544477776663
No 175
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=31.31 E-value=25 Score=35.76 Aligned_cols=41 Identities=39% Similarity=0.860 Sum_probs=30.5
Q ss_pred CCCCCCCC----CCCCCCCCceeeCCCceeEecCCCCcccCCCCcccc
Q 006839 518 DIDECKER----KACQCSECSCKDTWGSYECTCSGDLLYIRDHDTCIS 561 (629)
Q Consensus 518 dideC~~~----~~C~~~~~~C~nt~Gsy~C~C~~G~~~~~~g~~C~~ 561 (629)
+.++|... ..|. ..|.|+.|+|.|.|..||.+..+...|..
T Consensus 120 ~~~~c~~~~~~~~~~~---~~c~n~~g~~~csC~~g~~l~~~~~~~~~ 164 (361)
T 4aqb_A 120 DVDECKEREDEELSCD---HYCHNYIGGYYCSCRFGYILHTDNRTCRV 164 (361)
T ss_dssp ECCGGGTGGGSSSCCS---SEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred cccccccccccCCCCC---ccCCccCCCceeccCCCeEEecccccccc
Confidence 44555432 3455 89999999999999999988877666543
No 176
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=30.98 E-value=40 Score=24.29 Aligned_cols=32 Identities=16% Similarity=0.251 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHHHHHHHhhheeeeehhHHHhhhhh
Q 006839 569 SAWAAVWVILIGLAMAGGGAYLVYKYRLRSYMDSE 603 (629)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~r~~~~~~ 603 (629)
+.|.+...++.+++++.++.+..++ -.||++.
T Consensus 11 p~wiIi~svl~GLllL~li~~~LwK---~GFFkR~ 42 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLLTILVLAMWK---VGFFKRN 42 (54)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHH---HHHTTTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH---cCcccCC
Confidence 3466666777777777666665554 3456543
No 177
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=28.33 E-value=32 Score=24.77 Aligned_cols=32 Identities=13% Similarity=0.264 Sum_probs=19.6
Q ss_pred hhHHHHHHHHHHHHHHHhhheeeeehhHHHhhhhh
Q 006839 569 SAWAAVWVILIGLAMAGGGAYLVYKYRLRSYMDSE 603 (629)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~r~~~~~~ 603 (629)
+.|+++..++++++++.++.+..++. .||++.
T Consensus 8 p~WiIi~svl~GLLLL~Lii~~LwK~---GFFKR~ 39 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLLILALWKI---GFFKRP 39 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHH---HHTTSC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHc---CcccCC
Confidence 34666677777777777666655543 455544
No 178
>4b2v_A S64; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=27.72 E-value=23 Score=21.42 Aligned_cols=13 Identities=54% Similarity=1.641 Sum_probs=9.8
Q ss_pred hcccCCccCCCCCC
Q 006839 257 QCINHGRYCAPDPE 270 (629)
Q Consensus 257 ~ci~~Gryc~~dp~ 270 (629)
.|+-+|.+| |||+
T Consensus 2 ecvenggfc-pdpe 14 (32)
T 4b2v_A 2 ECVENGGFC-PDPE 14 (32)
T ss_dssp CCCCTTCBC-CCTT
T ss_pred chhhcCCcC-CChH
Confidence 478889888 6675
No 179
>1hx2_A BSTI; beta-sheet disulfide-rich, hydrolase inhibitor; NMR {Bombina bombina} SCOP: g.22.1.2
Probab=27.25 E-value=90 Score=22.52 Aligned_cols=24 Identities=33% Similarity=0.879 Sum_probs=15.6
Q ss_pred CceeeCCCC--cccCCccCCCCCCCC
Q 006839 499 NGKCQCPPG--FKGDGVKSCVDIDEC 522 (629)
Q Consensus 499 ~~~C~C~~G--f~g~~~~~C~dideC 522 (629)
...|.|++| |..+....|....+|
T Consensus 35 ~~GC~C~~Gtv~v~~~~~~CV~~~~C 60 (60)
T 1hx2_A 35 NQRCGCISGTVLKSKDSSECVHPSKC 60 (60)
T ss_dssp CSEEEECTTCEESSTTCSSEECTTTC
T ss_pred CCCCCCCCCCeeEECCCCCEechhhC
Confidence 456999999 776532336655554
No 180
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=23.19 E-value=46 Score=29.68 Aligned_cols=24 Identities=21% Similarity=0.439 Sum_probs=17.5
Q ss_pred CCCCCCCceeeCC--CceeE-ecCCCCc
Q 006839 527 ACQCSECSCKDTW--GSYEC-TCSGDLL 551 (629)
Q Consensus 527 ~C~~~~~~C~nt~--Gsy~C-~C~~G~~ 551 (629)
+|. ++++|.... +.++| .|++||+
T Consensus 2 ~C~-~~g~C~~~~~~g~~~C~~C~~g~~ 28 (162)
T 1klo_A 2 PCP-GGSSCAIVPKTKEVVCTHCPTGTA 28 (162)
T ss_dssp CSC-TTCCEEECSSSCCEEECSCCTTEE
T ss_pred cCc-CcCcccccCCCCCEEeCCCCCCCc
Confidence 455 667887655 67888 6888886
No 181
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=23.07 E-value=1.2e+02 Score=23.59 Aligned_cols=20 Identities=15% Similarity=0.368 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHhhheeee
Q 006839 573 AVWVILIGLAMAGGGAYLVY 592 (629)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~ 592 (629)
++.++++++++++++.++++
T Consensus 13 Iv~gvi~gilliGllllliw 32 (79)
T 2knc_B 13 VLLSVMGAILLIGLAALLIW 32 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 33445555555544433333
Done!